RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL13A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197467

Ensembl transcript IDs: ENST00000354547.7, ENST00000357811.8, ENST00000398969.8, ENST00000398975.6, ENST00000398978.8, ENST00000478219.2, ENST00000479733.5, ENST00000484990.1, ENST00000517713.5, ENST00000520133.5, ENST00000520267.5, ENST00000522165.5, ENST00000645393.2, ENST00000673628.1, ENST00000673628.2, ENST00000673641.1, ENST00000673641.2, ENST00000673681.1, ENST00000673736.2, ENST00000673755.1, ENST00000673768.1, ENST00000673802.2, ENST00000673830.1, ENST00000673842.1, ENST00000673914.1, ENST00000673914.2, ENST00000673927.1, ENST00000673957.1, ENST00000673957.2, ENST00000673977.1, ENST00000674008.1, ENST00000674008.2, ENST00000674040.1, ENST00000674040.2, ENST00000674050.1, ENST00000674121.1, ENST00000674124.1, ENST00000682574.1, ENST00000682679.1, ENST00000683633.1, ENST00000684387.1

Found 1120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTaGAACTCCAATTGGTCCTGGAGTACCCGGTGGCCCAGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: RVSFAAPLALWSRWA*NSNWSWSTRWPRPA
Trigger: GGCAGGCCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673914.1
ENST00000674008.1
3UTR TCA 90 bp GTTGGCGAGGCCAGGCTCGTTCAGGGCAGTCATTCGACTGGGCCGTaGTCCTCTTTGGGTTCAGGGGCTGTTGGGGAGAGAGCACCTCCC +
Preference number: 1 (lower is better)
Translates to: VGEARLVQGSHSTGP*SSLGSGAVGERAPP
Trigger: GGGAGGTGCTCTCTCCCCAACAGCCCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCCTGAACGAGCCTGGCCTCGCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR TCA 90 bp CTGGAACGTCCGCCTTTTTATGACCGGGGGTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAGCCGGTGTGGGTACTCTCCACACTG +
Preference number: 1 (lower is better)
Translates to: LERPPFYDRGWSQSH*IEERQQPVWVLSTL
Trigger: CAGTGTGGAGAGTACCCACACCGGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCACCCCCGGTCATAAAAAGGCGGACGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR CCA 90 bp TTTCAGAGTTGGCGAGGCCAGGCTCGTTCAGGGCAGTCATTCGACTaGGCCGTGATCCTCTTTGGGTTCAGGGGCTGTTGGGGAGAGAGC +
Preference number: 1 (lower is better)
Translates to: FQSWRGQARSGQSFD*AVILFGFRGCWGES
Trigger: GCTCTCTCCCCAACAGCCCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCCTGAACGAGCCTGGCCTCGCCAACTCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR CCA 90 bp AGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTaGAACTCCAATTGGTCCTGGAGTACCCTGGGAAGGGGAAAGAAA +
Preference number: 1 (lower is better)
Translates to: RVSFAAPLALWSRWA*NSNWSWSTLGRGKK
Trigger: TTTCTTTCCCCTTCCCAGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR CCA 90 bp CTGATGCCTAGAGATGAGCAAGGTCCAAGGCCCAGTTTTCAGAGTTaGCGAGGCCAGGCTCGTTCAGGGCAGTCATTCGACTGGGCCGTG +
Preference number: 1 (lower is better)
Translates to: LMPRDEQGPRPSFQS*RGQARSGQSFDWAV
Trigger: CACGGCCCAGTCGAATGACTGCCCTGAACGAGCCTGGCCTCGCCAACTCTGAAAACTGGGCCTTGGACCTTGCTCATCTCTAGGCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CCA 90 bp CGCTGGGCCTGGAACTCCAATTGGTCCTGGAGTACCCGGTGGCCCAGGCCTGCCTCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: RWAWNSNWSWSTRWPRPASGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...GGCAGGCCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674008.1
3UTR-3UTR CCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGATCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGSGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479733.5
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CGCTGGGCCTGGAACTCCAATTGGTCCTGGAGTACCCGGTGGCCCAGGCCTGCCTTCCGGGCGCCCCCTTaGCTCCATGCTTGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: RWAWNSNWSWSTRWPRPAFRAPP*LHACLA
Trigger: TGCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAA...GGCAGGCCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674008.1
3UTR-3UTR GCA 90 bp TGGAGCCCTTGGGGCCATCTGGTCCCTGTTCTCCAGCTGCTCCACGCTCCCCCTCTGGCATCCCTGGCATaGCCCGTTCTCCCTTCCGGC +
Preference number: 2 (lower is better)
Translates to: WSPWGHLVPVLQLLHAPPLASLA*PVLPSG
Trigger: GCCGGAAGGGAGAACGGGGCATGCCAGGGATGCCAG...AGGGGGAGCGTGGAGCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GCCCTGGCAGCCCAGGAACCGGTGAGCCTGCTTGTCCTGTCTCCCCTTTTTCCCTGGCCCCATAGGCCCTaGCAGTCCTGGGTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ALAAQEPVSLLVLSPLFPWPHRP*QSWVPQ
Trigger: CTGGGGCACCCAGGACTGCCAGGGCCTATGGGGCCA...GGGAAAAAGGGGAGACAGGACAAGCAGGCTCACCGGTTCCTGGGCTGCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GGCTCACCCTTCATCCCAGCCACGGCAATTCCGGGCGCCCCCTTGGCTCCATGCGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 2 (lower is better)
Translates to: GSPFIPATAIPGAPLAPCALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...GCATGGAGCCAAGGGGGCGCCCGGAATTGCCGTGGCTGGGATGAAGGGTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCGCCCCTCTCGCCCTTTaGTCCCGCTGGGCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: SPGGPCKPGSPAAPVGPVAPLAL*SRWAWN
Trigger: GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGC...GACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGGCCCCTCTCGCCCTTTaGTCCCGCTGGGCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPAPLAL*SRWAWN
Trigger: GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGC...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTGGGCCAATTTGCCCAGGAAGACCAGGAGGCCCCATCAAGGCCAGCGTCCGGAGGCTCCATGCTTGCCTaGCATCCCTGGCATGCCCCG +
Preference number: 2 (lower is better)
Translates to: VGQFAQEDQEAPSRPASGGSMLA*HPWHAP
Trigger: CGGGGCATGCCAGGGATGCCAGGCAAGCATGGAGCC...TCCGGACGCTGGCCTTGATGGGGCCTCCTGGTCTTCCTGGGCAAATTGGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CTGGGCCTGGAACTCCAATTGGTCCTGGAGTACCCGGTGGCCCAGGCCTGCCGTGCCCTTGGGGCCATCTaGTCCCTGTTCTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: LGLELQLVLEYPVAQACRALGAI*SLFSSC
Trigger: GCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGC...ACGGCAGGCCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673914.1
ENST00000674008.1
3UTR-3UTR CCA 90 bp GTACCCGGTGGCCCAGGCCTGCCGTCCAAACCTGAAGCTCCGGGTAGTCCCAGGCTCCTGGGTCTCCCTTaGTTCCTGGGATCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: VPGGPGLPSKPEAPGSPRLLGLP*FLGSLA
Trigger: AGCCAGGGATCCCAGGAACCAAGGGAGACCCAGGAG...CCTGGGACTACCCGGAGCTTCAGGTTTGGACGGCAGGCCTGGGCCACCGGGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674008.1
3UTR-3UTR GCA 90 bp CCCAGGAAGACCAGGAGGCCCCATCAAGGCCAGCGTCCGGATCTCCTGGAGAGCCTGGTGGACCTTGGATaGTGGCCTGGCTCTGTTCGC +
Preference number: 2 (lower is better)
Translates to: PRKTRRPHQGQRPDLLESLVDLG*WPGSVR
Trigger: GCGAACAGAGCCAGGCCAGCATCCAAGGTCCACCAG...GCTCTCCAGGAGATCCGGACGCTGGCCTTGATGGGGCCTCCTGGTCTTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCTCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 2 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELSLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGCATCCTCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: FQQPWTGKPSSPNGHGASSGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...GGATGCCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 2 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GGAGCCCTTGGGGCCATCTGGTCCCTGTTCTCCAGCTGCTCCACGCTCCCCCTTAGGCAGCAGCCGGTGTaGGTACTCTCCACACTGACC +
Preference number: 2 (lower is better)
Translates to: GALGAIWSLFSSCSTLPLRQQPV*VLSTLT
Trigger: GGTCAGTGTGGAGAGTACCCACACCGGCTGCTGCCT...AAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GGAGCCCTTGGGGCCATCTGGTCCCTGTTCTCCAGCTGCTCCACGCTCCCCCTTGTGGACCTTGGATGCTaGCCTGGCTCTGTTCGCCCT +
Preference number: 2 (lower is better)
Translates to: GALGAIWSLFSSCSTLPLVDLGC*PGSVRP
Trigger: AGGGCGAACAGAGCCAGGCCAGCATCCAAGGTCCAC...AAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCTTCCGGGCGCCCCCTTaGCTCCATGCTTGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: LVYREVPFPHRVLEGLAVFRAPP*LHACLA
Trigger: TGCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAA...GACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCACCTGCTTCTCCCTTTaGCCCTGGGGGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCTCFSL*PWGPRE
Trigger: CTCCCTGGGCCCCCAGGGCCAAAGGGAGAAGCAGGT...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CTGGGCCTGGAACTCCAATTGGTCCTGGAGTACCCGGTGGCCCAGGCCTGCCGTCTCCCTTGGAGCCCTTaGGGCCATCTGGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: LGLELQLVLEYPVAQACRLPWSP*GHLVPV
Trigger: AACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAG...ACGGCAGGCCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673914.1
ENST00000674008.1
3UTR-3UTR TCA 90 bp CCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTACCTTGGAGCCCCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: PGLPRGPFSPSCPGGPGSTLEPR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGGGCTCCAAGGT...ACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673914.1
ENST00000673957.1
3UTR-3UTR GCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGACAGCCCAGGAACCTCTaGTCCTGGATTGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGQPRNL*SWIALL
Trigger: GAGAAGGGCAATCCAGGAGCAGAGGTTCCTGGGCTG...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
3UTR-3UTR GCA 90 bp CCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCTGGCAGTCCTGGGTaGCCCAGAGGTCCACTTGGT +
Preference number: 2 (lower is better)
Translates to: PGLPRGPFSPSCPGGPGSPGSPG*PRGPLG
Trigger: ACCAAGTGGACCTCTGGGGCACCCAGGACTGCCAGG...ACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp GCCCTGGCAGCCCAGGAACCGGTGAGCCTGCTTGTCCTGTCTCCCCTTTTTCCCTCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 2 (lower is better)
Translates to: ALAAQEPVSLLVLSPLFPSLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...GGGAAAAAGGGGAGACAGGACAAGCAGGCTCACCGGTTCCTGGGCTGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CAGGAGGGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: QEGPCLLVYREVPFPHRVGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...GACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGCCCCTCTCGCCCTTTaGTCCCGCTGGGCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQAPLAL*SRWAWN
Trigger: GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGC...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: LVYREVPFPHRVLEGLAVPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...GACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: PGLPRGPFSPSCPGGPGSPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...ACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCAATCTCCCAGGCAGCAGCCGGTGTaGGTACTCTCCACACTGACC +
Preference number: 2 (lower is better)
Translates to: REVPFPHRVLEGLAVQSPRQQPV*VLSTLT
Trigger: GGTCAGTGTGGAGAGTACCCACACCGGCTGCTGCCT...GGGAGATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp AAACCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAGCCTGGGGGCCCTGGTaGACCTTGGATGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: KPRCPRFPLSPGGPCKPGAWGPW*TLDAGL
Trigger: CAGGCCAGCATCCAAGGTCCACCAGGGCCCCCAGGC...TCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCTCCATGCTTGCCTaGCATCCCTGGCATGCCCCG +
Preference number: 2 (lower is better)
Translates to: GPCLLVYREVPFPHRVLEGSMLA*HPWHAP
Trigger: CGGGGCATGCCAGGGATGCCAGGCAAGCATGGAGCC...CTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGACCTGCTTCTCCCTTTaGCCCTGGGGGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GPCLLVYREVPFPHRVLETCFSL*PWGPRE
Trigger: CTCCCTGGGCCCCCAGGGCCAAAGGGAGAAGCAGGT...CTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GCCCTGGCAGCCCAGGAACCGGTGAGCCTGCTTGTCCTGTCTCCCCTTTTTCCCCTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: ALAAQEPVSLLVLSPLFPLSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...GGGAAAAAGGGGAGACAGGACAAGCAGGCTCACCGGTTCCTGGGCTGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTTCCCTTCTGCTCCTaGGTCTCCCTTGGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLELPFCS*VSLGSW
Trigger: CCAGGAACCAAGGGAGACCCAGGAGCAGAAGGGAAG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674008.1
3UTR-3UTR CCA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCGGGTTCAGGGGCTGTTaGGGAGAGAGCACCTCCCCA +
Preference number: 2 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCGFRGC*GESTSP
Trigger: TGGGGAGGTGCTCTCTCCCCAACAGCCCCTGAACCC...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR TCA 90 bp ATCGTGTCCTGGAGGGCCTGGCAGTCCAATCTCCCCCTTCTGGCCTGGAATCCCACGTCCGCCTTTTTATaGCCGGGGGTGGAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: IVSWRAWQSNLPLLAWNPTSAFL*PGVEPV
Trigger: GACTGGCTCCACCCCCGGTCATAAAAAGGCGGACGT...GGGATTCCAGGCCAGAAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACACGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp GTGGGCCAATTTGCCCAGGAAGACCAGGAGGCCCCATCAAGGCCAGCGTCCGGAACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: VGQFAQEDQEAPSRPASGTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...TCCGGACGCTGGCCTTGATGGGGCCTCCTGGTCTTCCTGGGCAAATTGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp CCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCTGGCCATCGACACCTaGTTCTCCCTTTGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: PGLPRGPFSPSCPGGPGSLAIDT*FSLWPW
Trigger: CCAGGGCCAAAGGGAGAAGCAGGTGTCGATGGCCAG...ACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCTCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 2 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCSLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: PRCPRFPLSPGGPCKPGSHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...GCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673681.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: THELASTSVLAGPLWHQDPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CAGGAGGGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: QEGPCLLVYREVPFPHRVPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...GACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479733.5
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 2 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTACCCGGTGGCCCAGGCCTGCCGTCCAAACCTGAAGCTCCGGGTAGTCCCAGGTGGCTCTGTTCGCCCTaGAACGTCCGCCTTTTTATG +
Preference number: 2 (lower is better)
Translates to: VPGGPGLPSKPEAPGSPRWLCSP*NVRLFM
Trigger: CATAAAAAGGCGGACGTTCCAGGGCGAACAGAGCCA...CCTGGGACTACCCGGAGCTTCAGGTTTGGACGGCAGGCCTGGGCCACCGGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674008.1
3UTR-3UTR CCA 90 bp CCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTGTAGCCCTGGATCCCTaGGTCTCCCTTTGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: PGLPRGPFSPSCPGGPGSVALDP*VSLWSR
Trigger: CCTGGACCAAAGGGAGACCCAGGGATCCAGGGCTAC...ACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCCCCTGGAGCTCCAGGTaGGCCAATTTGCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCPWSSR*ANLPRK
Trigger: CTTCCTGGGCAAATTGGCCCACCTGGAGCTCCAGGG...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTCCTGGAGTACCCGGTaGCCCAGGCCTGCCGTCCAA +
Preference number: 2 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLSWSTR*PRPAVQ
Trigger: TTGGACGGCAGGCCTGGGCCACCGGGTACTCCAGGA...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673914.1
ENST00000674008.1
3UTR-3UTR CCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGGGCCGTGATCCTCTTTaGGTTCAGGGGCTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLGRDPL*VQGLLG
Trigger: CCCCAACAGCCCCTGAACCCAAAGAGGATCACGGCC...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR TCA 90 bp TCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: SPGGPCKPGSPAAPVGPVWSQSH*IEERQQ
Trigger: CTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCA...GACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp ATCGTGTCCTGGAGGGCCTGGCAGTCCAATCTCCCCCTTCTGGCCTGGAATCCCACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: IVSWRAWQSNLPLLAWNPTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...GGGATTCCAGGCCAGAAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACACGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACCTGGCAGTCCTGGGTaGCCCAGAGGTCCACTTGGT +
Preference number: 2 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIPGSPG*PRGPLG
Trigger: ACCAAGTGGACCTCTGGGGCACCCAGGACTGCCAGG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674040.1
3UTR-3UTR GCA 90 bp GTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCAACCTTGGCTCCATGCTTaGCTGGCATCCCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: VYREVPFPHRVLEGLAVQPWLHA*LASLAC
Trigger: GCATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGG...TTGGACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp CAGGAGGGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCGGCCAGGTTCCCCTCTaGCTCCTCCAATGGAGTTGC +
Preference number: 2 (lower is better)
Translates to: QEGPCLLVYREVPFPHRVGQVPL*LLQWSC
Trigger: GCAACTCCATTGGAGGAGGCAGAGGGGAACCTGGCC...GACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: THELASTSVLAGPLWHQDHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCAATCTCTCCTTTTTGTCCCTaGGGTCCCGGCTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LPRGPFSPSCPGGPGSPISPFCP*GPGCPG
Trigger: CCCAGGACAGCCGGGACCCCAGGGACAAAAAGGAGA...GATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGCCTTGGATGCTGGCCTaGCTCTGTTCGCCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: GPCLLVYREVPFPHRVLEPWMLA*LCSPWN
Trigger: GTTCCAGGGCGAACAGAGCCAGGCCAGCATCCAAGG...CTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATAGGCCCTGGCAGTCCTaGGTGCCCCAGAGGTCCACT +
Preference number: 2 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNRPWQS*VPQRST
Trigger: AGTGGACCTCTGGGGCACCCAGGACTGCCAGGGCCT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674040.1
3UTR-3UTR CCA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGACCTGCTTCTCCCTTTaGCCCTGGGGGCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGTCFSL*PWGPRE
Trigger: CTCCCTGGGCCCCCAGGGCCAAAGGGAGAAGCAGGT...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGCTCCCTTGGAGCCCTTaGGGCCATCTGGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: GPCLLVYREVPFPHRVLELPWSP*GHLVPV
Trigger: AACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAG...CTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CAGGAGGGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTCCCTTGGAGCCCTTaGGGCCATCTGGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: QEGPCLLVYREVPFPHRVLPWSP*GHLVPV
Trigger: AACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAG...GACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CAGGAGGGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGCCTGGAATCCCTaGAGCTCCAGGTGGGCCAAT +
Preference number: 2 (lower is better)
Translates to: QEGPCLLVYREVPFPHRVLAWNP*SSRWAN
Trigger: ATTGGCCCACCTGGAGCTCCAGGGATTCCAGGCCAG...GACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp AAACCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGATTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 2 (lower is better)
Translates to: KPRCPRFPLSPGGPCKPGFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...TCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR TCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: HELASTSVLAGPLWHQDTWSQSH*IEERQQ
Trigger: CTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674040.1
3UTR-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTGGTGGACCTTGGATaGTGGCCTGGCTCTGTTCGC +
Preference number: 2 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILVDLG*WPGSVR
Trigger: GCGAACAGAGCCAGGCCAGCATCCAAGGTCCACCAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674040.1
3UTR-3UTR GCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTGGCCAGGTTCCCCTCTaGCTCCTCCAATGGAGTTGC +
Preference number: 2 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLGQVPL*LLQWSC
Trigger: GCAACTCCATTGGAGGAGGCAGAGGGGAACCTGGCC...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp TTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGCATCCGGCCAGGTTCCCCTCTaGCTCCTCCAATGGAGTTGC +
Preference number: 2 (lower is better)
Translates to: FQQPWTGKPSSPNGHGASGQVPL*LLQWSC
Trigger: GCAACTCCATTGGAGGAGGCAGAGGGGAACCTGGCC...GGATGCCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTGGGCCAATTTGCCCAGGAAGACCAGGAGGCCCCATCAAGGCCAGCGTCCGGACTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 2 (lower is better)
Translates to: VGQFAQEDQEAPSRPASGLAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...TCCGGACGCTGGCCTTGATGGGGCCTCCTGGTCTTCCTGGGCAAATTGGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674040.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCAGGAACCTCTGCTCCTaGATTGCCCTTCTCCCCGGC +
Preference number: 2 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLRNLCS*IALLPG
Trigger: GCCGGGGAGAAGGGCAATCCAGGAGCAGAGGTTCCT...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
3UTR-3UTR CCA 90 bp AAACCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 2 (lower is better)
Translates to: KPRCPRFPLSPGGPCKPGALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...TCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000673681.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCTCTCCTTTTTGTCCCTaGGGTCCCGGCTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLSPFCP*GPGCPG
Trigger: CCCAGGACAGCCGGGACCCCAGGGACAAAAAGGAGA...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACCTTGGATGCTGGCCTaGCTCTGTTCGCCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIPWMLA*LCSPWN
Trigger: GTTCCAGGGCGAACAGAGCCAGGCCAGCATCCAAGG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTGTGGACCTTGGATGCTaGCCTGGCTCTGTTCGCCCT +
Preference number: 2 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLVDLGC*PGSVRP
Trigger: AGGGCGAACAGAGCCAGGCCAGCATCCAAGGTCCAC...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGCCTGGGGGCCCTGGTaGACCTTGGATGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGMAWGPW*TLDAGL
Trigger: CAGGCCAGCATCCAAGGTCCACCAGGGCCCCCAGGC...CATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGAGGGGCCTGGGGGCCCTaGTGGACCTTGGATGCTGGC +
Preference number: 2 (lower is better)
Translates to: THTGQSKVRGITCSSSLGGAWGP*WTLDAG
Trigger: GCCAGCATCCAAGGTCCACCAGGGCCCCCAGGCCCC...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp AAACCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAGTAGCCCTGGATCCCTaGGTCTCCCTTTGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: KPRCPRFPLSPGGPCKPGVALDP*VSLWSR
Trigger: CCTGGACCAAAGGGAGACCCAGGGATCCAGGGCTAC...TCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTGTGTCCTGGAGGGCCTaGCAGTCCAATCTCCCCCTT +
Preference number: 2 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLVSWRA*QSNLPL
Trigger: AAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACAC...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGCATCCGTGTCCTGGAGGGCCTaGCAGTCCAATCTCCCCCTT +
Preference number: 2 (lower is better)
Translates to: FQQPWTGKPSSPNGHGASVSWRA*QSNLPL
Trigger: AAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACAC...GGATGCCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR TCA 90 bp TGGGCCTGGAACTCCAATTGGTCCTGGAGTACCCGGTGGCCCAGGCCTGCCGTCGGGTACTCTCCACACTaGCCCTTTTCTCCTTTTTGT +
Preference number: 2 (lower is better)
Translates to: WAWNSNWSWSTRWPRPAVGYSPH*PFSPFC
Trigger: ACAAAAAGGAGAAAAGGGTCAGTGTGGAGAGTACCC...GACGGCAGGCCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674008.1
3UTR-3UTR GCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp ATCGTGTCCTGGAGGGCCTGGCAGTCCAATCTCCCCCTTCTGGCCTGGAATCCCCTCCTCCAATGGAGTTaGCAGCATCGCCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: IVSWRAWQSNLPLLAWNPLLQWS*QHRLSL
Trigger: GAGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAG...GGGATTCCAGGCCAGAAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACACGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp TCTGGCCCTGGCAGCCCAGGAACCGGTGAGCCTGCTTGTCCTGTCTCCCCTTTTTGGCTCTGTTCGCCCTaGAACGTCCGCCTTTTTATG +
Preference number: 2 (lower is better)
Translates to: SGPGSPGTGEPACPVSPFWLCSP*NVRLFM
Trigger: CATAAAAAGGCGGACGTTCCAGGGCGAACAGAGCCA...AAAAGGGGAGACAGGACAAGCAGGCTCACCGGTTCCTGGGCTGCCAGGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGATGGCCCCATAGGCCCTaGCAGTCCTGGGTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: THTGQSKVRGITCSSSLGWPHRP*QSWVPQ
Trigger: CTGGGGCACCCAGGACTGCCAGGGCCTATGGGGCCA...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp AAGACCAGGAGGCCCCATCAAGGCCAGCGTCCGGATCTCCTGGAGAGCCTCATTCTCTGCCTCCTCCAATaGAGTTGCCAGCATCGCCTT +
Preference number: 2 (lower is better)
Translates to: KTRRPHQGQRPDLLESLILCLLQ*SCQHRL
Trigger: AAGGCGATGCTGGCAACTCCATTGGAGGAGGCAGAG...AATGAGGCTCTCCAGGAGATCCGGACGCTGGCCTTGATGGGGCCTCCTGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTCCAATCTCCCCCTTCTaGCCTGGAATCCCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLPISPF*PGIPGA
Trigger: AGCTCCAGGGATTCCAGGCCAGAAGGGGGAGATTGG...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCAGGGCCCATGTCTCCTaGTTTACCGCGAGGTCCCTT +
Preference number: 2 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLRAHVS*FTARSL
Trigger: AAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCT...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCTTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TCTGGCCCTGGCAGCCCAGGAACCGGTGAGCCTGCTTGTCCTGTCTCCCCTTTTTTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: SGPGSPGTGEPACPVSPFFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...AAAAGGGGAGACAGGACAAGCAGGCTCACCGGTTCCTGGGCTGCCAGGGCCAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCGTCTCCCTTGGTTCCTaGGATCCCTGGCTCACCCTT +
Preference number: 2 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLVSLGS*DPWLTL
Trigger: AAGGGTGAGCCAGGGATCCCAGGAACCAAGGGAGAC...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674008.1
3UTR-3UTR TCA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGCATTCGACTGGGCCGTaGTCCTCTTTGGGTTCAGGG +
Preference number: 2 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGHSTGP*SSLGSG
Trigger: CCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATG...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR GCA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp GTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCAACTCCTCCAATGGAGTTaGCAGCATCGCCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VYREVPFPHRVLEGLAVQLLQWS*QHRLSL
Trigger: GAGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAG...TTGGACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGMPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...CATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674040.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGGAACAAGGCCCTGGCAGTCCTaGGTGCCCCAGAGGTCCACT +
Preference number: 2 (lower is better)
Translates to: PFSPFAPSSPASPFGPGTRPWQS*VPQRST
Trigger: AGTGGACCTCTGGGGCACCCAGGACTGCCAGGGCCT...TGTTCCTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAAGTGGAAGGTTCTCACTaGAGAGCCTCATTGATGTTT +
Preference number: 2 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEVEGSH*RASLMF
Trigger: AAACATCAATGAGGCTCTCCAGTGAGAACCTTCCAC...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673914.1
3UTR-3UTR TCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGAACCTTGGAGCCCCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: THTGQSKVRGITCSSSLGTLEPR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGGGCTCCAAGGT...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673914.1
ENST00000673957.1
3UTR-3UTR TCA 90 bp CTGGGCCTGGAACTCCAATTGGTCCTGGAGTACCCGGTGGCCCAGGCCTGCCGTACTGGAGAGCCTCATTaGTGTTTCCATTGTAATCCA +
Preference number: 2 (lower is better)
Translates to: LGLELQLVLEYPVAQACRTGEPH*CFHCNP
Trigger: TGGATTACAATGGAAACATCAATGAGGCTCTCCAGT...ACGGCAGGCCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673914.1
3UTR-3UTR GCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTCCTCCAATGGAGTTaGCAGCATCGCCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLLLQWS*QHRLSL
Trigger: GAGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAG...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGCTGGCCATCGACACCTaGTTCTCCCTTTGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGMLAIDT*FSLWPW
Trigger: CCAGGGCCAAAGGGAGAAGCAGGTGTCGATGGCCAG...CATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGAGAGCACCTCCCCATaGCTCAGAGCCAGATTTGTG +
Preference number: 2 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGESTSP*LRARFV
Trigger: CACAAATCTGGCTCTGAGGCATGGGGAGGTGCTCTC...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CCA 90 bp CAGGAGGGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCTTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 2 (lower is better)
Translates to: QEGPCLLVYREVPFPHRVLFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...GACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR TCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGGTACTCTCCACACTaGCCCTTTTCTCCTTTTTGT +
Preference number: 2 (lower is better)
Translates to: THELASTSVLAGPLWHQDGYSPH*PFSPFC
Trigger: ACAAAAAGGAGAAAAGGGTCAGTGTGGAGAGTACCC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674040.1
3UTR-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 2 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNLAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 2 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGLAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674040.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CAAGGCCAGCGTCCGGATCTCCTGGAGAGCCTCATTGATGTTTCCATTGTAATCCACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: QGQRPDLLESLIDVSIVIHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...GATTACAATGGAAACATCAATGAGGCTCTCCAGGAGATCCGGACGCTGGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGACACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: THTGQSKVRGITCSSSLGHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674040.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGCTCTGCCTCCTCCAATaGAGTTGCCAGCATCGCCTT +
Preference number: 2 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRLCLLQ*SCQHRL
Trigger: AAGGCGATGCTGGCAACTCCATTGGAGGAGGCAGAG...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673914.1
3UTR-3UTR CCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTAATCCAGGCGCTCCTTaGTCTCCCTTATCCCCTTTA +
Preference number: 2 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSNPGAP*SPLSPL
Trigger: TAAAGGGGATAAGGGAGACCAAGGAGCGCCTGGATT...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673957.1
3UTR-3UTR CCA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGAGCGTCCGGATCTCCTaGAGAGCCTCATTGATGTTT +
Preference number: 2 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGSVRIS*RASLMF
Trigger: AAACATCAATGAGGCTCTCCAGGAGATCCGGACGCT...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR TCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTCCTGGAGAGCCTCATTaGTGTTTCCATTGTAATCCA +
Preference number: 2 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLPGEPH*CFHCNP
Trigger: TGGATTACAATGGAAACATCAATGAGGCTCTCCAGG...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGACCCAGTTTTCAGAGTTaGCGAGGCCAGGCTCGTTCA +
Preference number: 2 (lower is better)
Translates to: THTGQSKVRGITCSSSLGPSFQS*RGQARS
Trigger: TGAACGAGCCTGGCCTCGCCAACTCTGAAAACTGGG...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR GCA 90 bp TCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCTGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 2 (lower is better)
Translates to: SPGGPCKPGSPAAPVGPVCAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...GACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 2 (lower is better)
Translates to: HELASTSVLAGPLWHQDTCAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGATTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 2 (lower is better)
Translates to: THTGQSKVRGITCSSSLGLFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
ENST00000674124.1
3UTR-3UTR TCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCCTGGGTGCCCCACCTaGTGCCTAGAGATGAGCAAG +
Preference number: 2 (lower is better)
Translates to: KYHGPLHLCEFTHELASTPGCPT*CLEMSK
Trigger: CTTGCTCATCTCTAGGCATCAGGTGGGGCACCCAGG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673768.1
ENST00000673957.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR GCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 2 (lower is better)
Translates to: LASTSVLAGPLWHQDTIICAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 2 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGGGCAGTCATTCGACTaGGCCGTGATCCTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: KYHGPLHLCEFTHELASTGQSFD*AVILFG
Trigger: CCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCAGGTGGGCCAATTTaGCCAGGAAGACCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPGGPI*PGRPGG
Trigger: GCCTCCTGGTCTTCCTGGGCAAATTGGCCCACCTGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 2 (lower is better)
Translates to: KYHGPLHLCEFTHELASTLAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGGTCCTGGAGTACCCTaGGAAGGGGAAAGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAGPGVP*EGERKQ
Trigger: CTGCTTTCTTTCCCCTTCCCAGGGTACTCCAGGACC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 2 (lower is better)
Translates to: LSKYHGPLHLCEFTHELALAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACAATCCAGGCGCTCCTTaGTCTCCCTTATCCCCTTTA +
Preference number: 2 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHNPGAP*SPLSPL
Trigger: TAAAGGGGATAAGGGAGACCAAGGAGCGCCTGGATT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673957.1
3UTR-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 2 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDCAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 2 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHCAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673768.1
ENST00000673957.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CAA 90 bp TGGAGCCCTTGGGGCCATCTGGTCCCTGTTCTCCAGCTGCTCCACGCTCCCCCTGCTCCACGCTCCCCCTaGTCTCCTGGCTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: WSPWGHLVPVLQLLHAPPAPRSP*SPGCPG
Trigger: CCCAGGGCAGCCAGGAGACAAGGGGGAGCGTGGAGC...AGGGGGAGCGTGGAGCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAATGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 3 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479733.5
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TGGAGCCCTTGGGGCCATCTGGTCCCTGTTCTCCAGCTGCTCCACGCTCCCCCTTGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: WSPWGHLVPVLQLLHAPPCPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...AGGGGGAGCGTGGAGCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACGCCAGTCGCACTGAATaGAGGAGAGGCAGCAGCCGG +
Preference number: 3 (lower is better)
Translates to: PRVSFAAPLALWSRWAWNASRTE*RRGSSR
Trigger: CCGGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGC...GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCAATCTCCCCCTTCTGGCCTGGATTCCGGGCGCCCCCTaGGCTCCATGCTTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: FPIVSWRAWQSNLPLLAWIPGAP*APCLPG
Trigger: GCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAAT...CCAGGCCAGAAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPCPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp GCCCTGGCAGCCCAGGAACCGGTGAGCCTGCTTGTCCTGTCTCCCCTTTTTCCCGCTCCTGGGTCTCCCTaGGTTCCTGGGATCCCTGGC +
Preference number: 3 (lower is better)
Translates to: ALAAQEPVSLLVLSPLFPAPGSP*VPGIPG
Trigger: GCCAGGGATCCCAGGAACCAAGGGAGACCCAGGAGC...GGGAAAAAGGGGAGACAGGACAAGCAGGCTCACCGGTTCCTGGGCTGCCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674008.1
3UTR-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: THELASTSVLAGPLWHQDCPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TGGAGCCCTTGGGGCCATCTGGTCCCTGTTCTCCAGCTGCTCCACGCTCCCCCTATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 3 (lower is better)
Translates to: WSPWGHLVPVLQLLHAPPIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...AGGGGGAGCGTGGAGCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAATTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 3 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR CCA 72 bp GTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGGTCCTGGAGTACCCGG +
Preference number: 3 (lower is better)
Translates to: VSFAAPLALWSR*AWNSNWSWSTR
Trigger: CCGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673914.1
ENST00000674008.1
3UTR-3UTR CAA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCTGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 3 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479733.5
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAAGGCCTGGAACTCCAATaGGTCCTGGAGTACCGGGTA +
Preference number: 3 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEGLELQ*VLEYRV
Trigger: TACCCGGTACTCCAGGACCAATTGGAGTTCCAGGCC...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479733.5
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp ATCGTGTCCTGGAGGGCCTGGCAGTCCAATCTCCCCCTTCTGGCCTGGAATCCCTCTCCCTTGGAGCCCTaGGGGCCATCTGGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: IVSWRAWQSNLPLLAWNPSPLEP*GPSGPC
Trigger: ACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAGA...GGGATTCCAGGCCAGAAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACACGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 3 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000479733.5
ENST00000673681.1
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGGGCCTGGAACTCCAATaGGTCCTGGAGTACCCTGGG +
Preference number: 3 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLGLELQ*VLEYPG
Trigger: CCCAGGGTACTCCAGGACCAATTGGAGTTCCAGGCC...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR CCA 72 bp TGGCGAGGCCAGGCTCGTTCAGGGCAGTCATTCGACTaGGCCGTGATCCTCTTTGGGTTCAGGGGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: WRGQARSGQSFD*AVILFGFRGCW
Trigger: CCAACAGCCCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCCTGAACGAGCCTGGCCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR CCA 72 bp GTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGGTCCTGGAGTACCCTG +
Preference number: 3 (lower is better)
Translates to: VSFAAPLALWSR*AWNSNWSWSTL
Trigger: CAGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CAA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 3 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000479733.5
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 3 (lower is better)
Translates to: PRFPLSPGGPCKPGSPAAVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...AGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000479733.5
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGCATCCGCCAGTCGCACTGAATaGAGGAGAGGCAGCAGCCGG +
Preference number: 3 (lower is better)
Translates to: FQQPWTGKPSSPNGHGASASRTE*RRGSSR
Trigger: CCGGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGC...GGATGCCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGCATCCCCCTTGGCTCCATGCTaGCCTGGCATCCCTGGCATG +
Preference number: 3 (lower is better)
Translates to: FQQPWTGKPSSPNGHGASPLAPC*PGIPGM
Trigger: CATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGGG...GGATGCCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp GTGGGCCAATTTGCCCAGGAAGACCAGGAGGCCCCATCAAGGCCAGCGTCCGGACCTCCTCCAATGGAGTaGCCAGCATCGCCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: VGQFAQEDQEAPSRPASGPPPME*PASPFS
Trigger: AGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAGG...TCCGGACGCTGGCCTTGATGGGGCCTCCTGGTCTTCCTGGGCAAATTGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CTGCCGTCCAAACCTGAAGCTCCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 3 (lower is better)
Translates to: LPSKPEAPGSPRGPRSPFFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...AAAAGGAGACCGTGGTCCCCTGGGACTACCCGGAGCTTCAGGTTTGGACGGCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000673914.1
ENST00000674008.1
3UTR TCA 72 bp CCGCCTTTTTATGACCGGGGGTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAGCCGGTGTGGGTACTC +
Preference number: 3 (lower is better)
Translates to: PPFYDRGWSQSH*IEERQQPVWVL
Trigger: GAGTACCCACACCGGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCACCCCCGGTCATAAAAAGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
3UTR TCA 72 bp GCCAGGCTCGTTCAGGGCAGTCATTCGACTGGGCCGTaGTCCTCTTTGGGTTCAGGGGCTGTTGGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: ARLVQGSHSTGP*SSLGSGAVGER
Trigger: TCTCTCCCCAACAGCCCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCCTGAACGAGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR CCA 72 bp TTCAGGGCAGTCATTCGACTGGGCCGTGATCCTCTTTaGGTTCAGGGGCTGTTGGGGAGAGAGCACCTCCCC +
Preference number: 3 (lower is better)
Translates to: FRAVIRLGRDPL*VQGLLGREHLP
Trigger: GGGGAGGTGCTCTCTCCCCAACAGCCCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CAA 90 bp CCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 3 (lower is better)
Translates to: PRCPRFPLSPGGPCKPGSSGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...GCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673681.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGACCTCTGCTCCTGGATaGCCCTTCTCCCCGGCTTCT +
Preference number: 3 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQTSAPG*PFSPAS
Trigger: AGAAGCCGGGGAGAAGGGCAATCCAGGAGCAGAGGT...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
3UTR-3UTR CAA 90 bp GGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 3 (lower is better)
Translates to: GPCLLVYREVPFPHRVLEVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...CTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp TTACCGCGAGGTCCCTTTTCCCCATCGTGTCCTGGAGGGCCTGGCAGTCCAATCGGCCTGGAACTCCAATaGGTCCTGGAGTACCGGGTA +
Preference number: 3 (lower is better)
Translates to: LPRGPFSPSCPGGPGSPIGLELQ*VLEYRV
Trigger: TACCCGGTACTCCAGGACCAATTGGAGTTCCAGGCC...GATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAAAAGGGACCTCGCGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTTCTCCCTTGGAGCCCTaGGGGCCATCTGGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSSPLEP*GPSGPC
Trigger: ACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAGA...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCTTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 3 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCGCCTCAGAGCCAGATTaGTGGACTGAAACCCTTTTG +
Preference number: 3 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELASEPD*WTETLL
Trigger: CAAAAGGGTTTCAGTCCACAAATCTGGCTCTGAGGC...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CAA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGCCCAGTTTTCAGAGTaGGCGAGGCCAGGCTCGTTC +
Preference number: 3 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQAQFSE*ARPGSF
Trigger: GAACGAGCCTGGCCTCGCCAACTCTGAAAACTGGGC...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CAA 90 bp CAGGAGGGCCCATGTCTCCTGGTTTACCGCGAGGTCCCTTTTCCCCATCGTGTCCCTCCTCCAATGGAGTaGCCAGCATCGCCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: QEGPCLLVYREVPFPHRVPPPME*PASPFS
Trigger: AGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAGG...GACACGATGGGGAAAAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673914.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCACACCAGGCAATCAGTaGAAGAGCAAACCAAGAGCC +
Preference number: 3 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCTPGNQ*KSKPRA
Trigger: GGCTCTTGGTTTGCTCTTCAACTGATTGCCTGGTGT...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673914.1
3UTR-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 3 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNSGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 3 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 3 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGMIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...CATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673681.1
ENST00000673957.1
ENST00000674008.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTGGGTTCAGGGGCTGTaGGGGAGAGAGCACCTCCCC +
Preference number: 3 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMWVQGL*GREHLP
Trigger: GGGGAGGTGCTCTCTCCCCAACAGCCCCTGAACCCA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
3UTR-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 3 (lower is better)
Translates to: KYHGPLHLCEFTHELASTSGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CAA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 3 (lower is better)
Translates to: LSKYHGPLHLCEFTHELASGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000673977.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
3UTR-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 3 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673957.1
ENST00000674040.1
3UTR-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 3 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMSGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673628.1
ENST00000673641.1
ENST00000673681.1
ENST00000673768.1
ENST00000673957.1
ENST00000674040.1
ENST00000674050.1
ENST00000674124.1
CDS-3UTR CCA 90 bp CCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRVSFAAPLALWSRWAWNSGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR TCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAAGGCCGCGGGGACCAATaGTGGACAGCCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEGRGDQ*WTAQRL
Trigger: GAGACGCTGGGCTGTCCATCATTGGTCCCCGCGGCC...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGATGGCCCCATAGGCCCTaGCAGTCCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGWPHRP*QSWVPQ
Trigger: CTGGGGCACCCAGGACTGCCAGGGCCTATGGGGCCA...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGGCGGGCACCGGTGGCTaGCGCTTTGTGGGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPAGTGG*RFVGAL
Trigger: GAGCGCACCCACAAAGCGGCAGCCACCGGTGCCCGC...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTGGGTGGCCCGGTTTaGCGTCCAGCCCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLELGGPV*RPAQWD
Trigger: GTCCCATTGGGCTGGACGGCAAACCGGGCCACCCAG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGCCGCGGGCACCGGTaGCTGCCGCTTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDGRGHR*LPLCGC
Trigger: GCACCCACAAAGCGGCAGCCACCGGTGCCCGCGGCC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACAGCCCGCACGACCCTaGACTCGGCAGCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTQPARP*TRQPCA
Trigger: GGCGCACGGCTGCCGAGTCCAGGGTCGTGCGGGCTG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGGCAGAGGTGGGTCGTaGCGGCTGGCGAGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTGRGGS*RLARSA
Trigger: TGCGCTCCTCGCCAGCCGCCACGACCCACCTCTGCC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGGGGTCCCGGCTGTCCTaGGGGACCCGTCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLGSRLS*GTRQTH
Trigger: ATGGGTCTGACGGGTCCCCCAGGACAGCCGGGACCC...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACGTGGACCTTGGATGCTaGCCTGGCTCTGTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: PRVSFAAPLALWSRWAWNVDLGC*PGSVRP
Trigger: AGGGCGAACAGAGCCAGGCCAGCATCCAAGGTCCAC...GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGGGCCTGGGGGCCCTaGTGGACCTTGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDGAWGP*WTLDAG
Trigger: GCCAGCATCCAAGGTCCACCAGGGCCCCCAGGCCCC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACGTAGCCCTGGATCCCTaGGTCTCCCTTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRVSFAAPLALWSRWAWNVALDP*VSLWSR
Trigger: CCTGGACCAAAGGGAGACCCAGGGATCCAGGGCTAC...GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACCTTGCCTGGCATCCCTaGCATGCCCCGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PRVSFAAPLALWSRWAWNLAWHP*HAPFSL
Trigger: AAGGGAGAACGGGGCATGCCAGGGATGCCAGGCAAG...GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGATTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CCA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCTTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CCA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCCCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDSGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR TCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACAGTGGGCGAGCAGGCTaGGTGCCAGCGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDSGRAG*VPASRG
Trigger: CCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAAGTGGGCGAGCAGGCTaGGTGCCAGCGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTSGRAG*VPASRG
Trigger: CCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACT...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAAACGTCCCTTTCCGCTaGTCCCGGCAAAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGNVPFR*SRQRGR
Trigger: CCGTCCTCTTTGCCGGGAGCAGCGGAAAGGGACGTT...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAAAGGCTCTATCCAAACTaGGGGGCAGGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLERLYPN*GAGGKG
Trigger: GCCCTTTCCCCCTGCCCCGCAGTTTGGATAGAGCCT...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGCGGGCACCGGTGGCTaGCGCTTTGTGGGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIAGTGG*RFVGAL
Trigger: GAGCGCACCCACAAAGCGGCAGCCACCGGTGCCCGC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACGCAGCACCCGGGCCTaGAGCTCGGCCGTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIRSTRA*SSAVRK
Trigger: CTTTCGGACGGCCGAGCTGCAGGCCCGGGTGCTGCG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAATAGCCGTCTCCATTTaGTGCTCCCCGCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGIAVSI*CSPRSA
Trigger: AGCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTAT...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAGGCCAGGTTCCCCTCTaGCTCCTCCAATGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGGQVPL*LLQWSC
Trigger: GCAACTCCATTGGAGGAGGCAGAGGGGAACCTGGCC...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCGAGCTGCTGGCATGCTaGTTAGGCACTCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELELLAC*LGTPGV
Trigger: CACACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTC...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCAGGCAGAGGTGGGTCGTaGCGGCTGGCGAGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGAGRGGS*RLARSA
Trigger: TGCGCTCCTCGCCAGCCGCCACGACCCACCTCTGCC...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTGGCCGCGGGCACCGGTaGCTGCCGCTTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSGRGHR*LPLCGC
Trigger: GCACCCACAAAGCGGCAGCCACCGGTGCCCGCGGCC...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCAGCCCGCACGACCCTaGACTCGGCAGCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNQPARP*TRQPCA
Trigger: GGCGCACGGCTGCCGAGTCCAGGGTCGTGCGGGCTG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGTCGGCCGTCCGAAAGTaGGCGAGCAGGCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLSAVRK*ASRLSA
Trigger: GGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGA...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCGGGACCAGGAGGTCCTaGTGGGCAGTTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELGTRRS*WAVTSW
Trigger: CCAGGATGTAACTGCCCACCAGGACCTCCTGGTCCC...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGCCTGGGGGCCCTGGTaGACCTTGGATGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTAWGPW*TLDAGL
Trigger: CAGGCCAGCATCCAAGGTCCACCAGGGCCCCCAGGC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTGGGGCCTGGGGGCCCTaGTGGACCTTGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLGAWGP*WTLDAG
Trigger: GCCAGCATCCAAGGTCCACCAGGGCCCCCAGGCCCC...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTGGCCCCATAGGCCCTaGCAGTCCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDWPHRP*QSWVPQ
Trigger: CTGGGGCACCCAGGACTGCCAGGGCCTATGGGGCCA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTGGCCTGGAATCCCTaGAGCTCCAGGTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLELAWNP*SSRWAN
Trigger: ATTGGCCCACCTGGAGCTCCAGGGATTCCAGGCCAG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAGTGTCCTGGAGGGCCTaGCAGTCCAATCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGVSWRA*QSNLPL
Trigger: AAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACAC...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLELSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGCCCCTCTCGCCCTTTaGTCCCGCTGGGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTAPLAL*SRWAWN
Trigger: GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGCCCCTCTCGCCCTTTaGTCCCGCTGGGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDAPLAL*SRWAWN
Trigger: GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCTCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLSGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR TCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAAGTGGGCGAGCAGGCTaGGTGCCAGCGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTISGRAG*VPASRG
Trigger: CCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCAAGTGGGCGAGCAGGCTaGGTGCCAGCGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGASGRAG*VPASRG
Trigger: CCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACT...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR TCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGGCCGCGGGGACCAATaGTGGACAGCCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIGRGDQ*WTAQRL
Trigger: GAGACGCTGGGCTGTCCATCATTGGTCCCCGCGGCC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGCGGGCACCGGTGGCTaGCGCTTTGTGGGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNAGTGG*RFVGAL
Trigger: GAGCGCACCCACAAAGCGGCAGCCACCGGTGCCCGC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGCCGTCTCCATTTGCTaGTCCCCGCGCTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTAVSIC*SPRSAS
Trigger: GGAAGCGGAGCGCGGGGAGCAGCAAATGGAGACGGC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGCCCCCTTGGCTCCATaGTTGCCTGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDAPLAP*LPGIPG
Trigger: GCCAGGGATGCCAGGCAAGCATGGAGCCAAGGGGGC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGCCCCCTTGGCTCCATaGTTGCCTGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTAPLAP*LPGIPG
Trigger: GCCAGGGATGCCAGGCAAGCATGGAGCCAAGGGGGC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR GCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACAGCCCAGGAACCTCTaGTCCTGGATTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEQPRNL*SWIALL
Trigger: GAGAAGGGCAATCCAGGAGCAGAGGTTCCTGGGCTG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTGCCACTCTGGGTCTaGTCTGGCCACCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLELPLWV*SGHHVL
Trigger: GAGAACATGGTGGCCAGAGCAGACCCAGAGTGGCAG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCGCTGTCAGTCCTTCTaGGCGCCTCGTGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDRCQSF*APRVSR
Trigger: CCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGCCGCGGGCACCGGTaGCTGCCGCTTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGRGHR*LPLCGC
Trigger: GCACCCACAAAGCGGCAGCCACCGGTGCCCGCGGCC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGCAGCCCGCACGACCCTaGACTCGGCAGCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRQPARP*TRQPCA
Trigger: GGCGCACGGCTGCCGAGTCCAGGGTCGTGCGGGCTG...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACGGCGCCTCCTTGAGTaGAGCTTCCATTTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLERRLLE*SFHFSS
Trigger: GGACGAGAAATGGAAGCTCCACTCAAGGAGGCGCCG...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGGTCCGGGTCTTCCAGTaGGACCAGGAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPVRVFQ*DQEVLV
Trigger: CACCAGGACCTCCTGGTCCCACTGGAAGACCCGGAC...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGCCTGGGGGCCCTGGTaGACCTTGGATGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIAWGPW*TLDAGL
Trigger: CAGGCCAGCATCCAAGGTCCACCAGGGCCCCCAGGC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGGGGCCTGGGGGCCCTaGTGGACCTTGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNGAWGP*WTLDAG
Trigger: GCCAGCATCCAAGGTCCACCAGGGCCCCCAGGCCCC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGCTCCATGCTTGCCTaGCATCCCTGGCATGCCCCG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDGSMLA*HPWHAP
Trigger: CGGGGCATGCCAGGGATGCCAGGCAAGCATGGAGCC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTTCCGGGCGCCCCCTTaGCTCCATGCTTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDFRAPP*LHACLA
Trigger: TGCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAACCTGCTTCTCCCTTTaGCCCTGGGGGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTTCFSL*PWGPRE
Trigger: CTCCCTGGGCCCCCAGGGCCAAAGGGAGAAGCAGGT...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACCTGCTTCTCCCTTTaGCCCTGGGGGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDTCFSL*PWGPRE
Trigger: CTCCCTGGGCCCCCAGGGCCAAAGGGAGAAGCAGGT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATCCTGGAGTACCCGGTaGCCCAGGCCTGCCGTCCAA +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTSWSTR*PRPAVQ
Trigger: TTGGACGGCAGGCCTGGGCCACCGGGTACTCCAGGA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTCCTGGAGTACCCGGTaGCCCAGGCCTGCCGTCCAA +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDSWSTR*PRPAVQ
Trigger: TTGGACGGCAGGCCTGGGCCACCGGGTACTCCAGGA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp CCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PRFPLSPGGPCKPGSPAAPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...AGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CCA 90 bp GGTCCAAGGCCCAGTTTTCAGAGTTGGCGAGGCCAGGCTCGTTCAGGGCAGTCAGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GPRPSFQSWRGQARSGQSGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...TGACTGCCCTGAACGAGCCTGGCCTCGCCAACTCTGAAAACTGGGCCTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR GCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCTGGTGGACCTTGGATaGTGGCCTGGCTCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLLVDLG*WPGSVR
Trigger: GCGAACAGAGCCAGGCCAGCATCCAAGGTCCACCAG...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCTGGCAGTCCTGGGTaGCCCAGAGGTCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDPGSPG*PRGPLG
Trigger: ACCAAGTGGACCTCTGGGGCACCCAGGACTGCCAGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTGGCATCCCTGGCATaGCCCGTTCTCCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILASLA*PVLPSG
Trigger: GCCGGAAGGGAGAACGGGGCATGCCAGGGATGCCAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGCCCCCTTGGCTCCATaGTTGCCTGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIAPLAP*LPGIPG
Trigger: GCCAGGGATGCCAGGCAAGCATGGAGCCAAGGGGGC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCAGGTGGGCCAATTTaGCCAGGAAGACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRFPLSPGGPCKPGSPAAPGGPI*PGRPGG
Trigger: GCCTCCTGGTCTTCCTGGGCAAATTGGCCCACCTGG...AGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGGCAGAGCTGCTGGCATaGTGCTTAGGCACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPAELLA*CLGTPG
Trigger: ACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTCTGC...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp CCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCTTCACAACCAAGCTTaGCAAGGCGGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRCPRFPLSPGGPCKPGSLHNQA*QGGGPG
Trigger: GCCTGGGCCACCGCCTTGGCAAGCTTGGTTGTGAAG...GCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGTGGCTGCCGCTTTGTaGGTGCGCTCCGCTACCATC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTVAAAL*VRSATI
Trigger: GATGGTAGCGGAGCGCACCCACAAAGCGGCAGCCAC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGTCGCCCTTTGGTCCTaGGTGGCCCGGTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIVALWS*VARFAV
Trigger: GACGGCAAACCGGGCCACCCAGGACCAAAGGGCGAC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTTCTCCTTTTTGTCCCTaGGGTCCCGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRFPLSPGGPCKPGSPAASPFCP*GPGCPG
Trigger: CCCAGGACAGCCGGGACCCCAGGGACAAAAAGGAGA...AGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTGCCTGGGGGCCCTGGTaGACCTTGGATGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSAWGPW*TLDAGL
Trigger: CAGGCCAGCATCCAAGGTCCACCAGGGCCCCCAGGC...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGCCTGGGGGCCCTGGTaGACCTTGGATGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNAWGPW*TLDAGL
Trigger: CAGGCCAGCATCCAAGGTCCACCAGGGCCCCCAGGC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGGGCCTGGGGGCCCTaGTGGACCTTGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGAWGP*WTLDAG
Trigger: GCCAGCATCCAAGGTCCACCAGGGCCCCCAGGCCCC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAAGGCCCTGGCAGTCCTaGGTGCCCCAGAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIRPWQS*VPQRST
Trigger: AGTGGACCTCTGGGGCACCCAGGACTGCCAGGGCCT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGCCCCATAGGCCCTaGCAGTCCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNWPHRP*QSWVPQ
Trigger: CTGGGGCACCCAGGACTGCCAGGGCCTATGGGGCCA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCGGCTCCATGCTTGCCTaGCATCCCTGGCATGCCCCG +
Preference number: 4 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLGSMLA*HPWHAP
Trigger: CGGGGCATGCCAGGGATGCCAGGCAAGCATGGAGCC...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATTCCGGGCGCCCCCTTaGCTCCATGCTTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIFRAPP*LHACLA
Trigger: TGCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGCTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPLSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGTCCAGGAACACCTTaGAGCCCCGGTGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDGPGTP*SPGEPA
Trigger: AGCAGGCTCACCGGGGCTCCAAGGTGTTCCTGGACC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATCCTGGAGTACCCGGTaGCCCAGGCCTGCCGTCCAA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTISWSTR*PRPAVQ
Trigger: TTGGACGGCAGGCCTGGGCCACCGGGTACTCCAGGA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACCAGCACCTCAGTTCTaGCTGGCCCCCTTTGGCACC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTPAPQF*LAPFGT
Trigger: GGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGGGCACCTTTGTCCCCTaGGAGTCCGGGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLGTFVP*ESGSSS
Trigger: ACTGGAAGACCCGGACTCCCAGGGGACAAAGGTGCC...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGGGACCCCTTCTCGCCTaGTTGGCCCTTTACTCCCAC +
Preference number: 4 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLGPLLA*LALYSH
Trigger: GTGGGAGTAAAGGGCCAACCAGGCGAGAAGGGGTCC...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCACTCTGGGTCTGCTCTaGCCACCATGTTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELTLGLL*PPCSPL
Trigger: GAGAGGAGAACATGGTGGCCAGAGCAGACCCAGAGT...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTAGCTTGCCAAGGCGGTaGCCCAGGCCTGCCGTCCAA +
Preference number: 4 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLSLPRR*PRPAVQ
Trigger: TTGGACGGCAGGCCTGGGCCACCGCCTTGGCAAGCT...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGGTTCAGGGGCTGTTaGGGAGAGAGCACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDGFRGC*GESTSP
Trigger: TGGGGAGGTGCTCTCTCCCCAACAGCCCCTGAACCC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR TCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACTCCCGGCGCCTCCTTaGGTGGAGCTTCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLPAPP*VELPFL
Trigger: GAGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTCCTGGAGTACCCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDSWSTR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGGTACTCCAGGA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673977.1
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACAACGTCCCTTTCCGCTaGTCCCGGCAAAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDNVPFR*SRQRGR
Trigger: CCGTCCTCTTTGCCGGGAGCAGCGGAAAGGGACGTT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACTGCCGCTTTGTGGGTaGGCTCCGCTACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLPLCG*APLPSS
Trigger: AGAGGATGGTAGCGGAGCGCACCCACAAAGCGGCAG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACATAGCCGTCTCCATTTaGTGCTCCCCGCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDIAVSI*CSPRSA
Trigger: AGCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTAT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCTGGCATCCCTGGCATaGCCCGTTCTCCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNLASLA*PVLPSG
Trigger: GCCGGAAGGGAGAACGGGGCATGCCAGGGATGCCAG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACTCCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTCTGGCATCCCTGGCATaGCCCGTTCTCCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TPIGPGVPGSPRGPRSPFLASLA*PVLPSG
Trigger: GCCGGAAGGGAGAACGGGGCATGCCAGGGATGCCAG...AAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACCTTGGCTCCATGCTTaGCTGGCATCCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTPWLHA*LASLAC
Trigger: GCATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCTTGGCTCCATGCTTaGCTGGCATCCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDPWLHA*LASLAC
Trigger: GCATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGGCCAGGTTCCCCTCTaGCTCCTCCAATGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTGQVPL*LLQWSC
Trigger: GCAACTCCATTGGAGGAGGCAGAGGGGAACCTGGCC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACTGGCCATCGACACCTaGTTCTCCCTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLAIDT*FSLWPW
Trigger: CCAGGGCCAAAGGGAGAAGCAGGTGTCGATGGCCAG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCTGGCCATCGACACCTaGTTCTCCCTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDLAIDT*FSLWPW
Trigger: CCAGGGCCAAAGGGAGAAGCAGGTGTCGATGGCCAG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACCAGGTGGGCCAATTTaGCCAGGAAGACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTPGGPI*PGRPGG
Trigger: GCCTCCTGGTCTTCCTGGGCAAATTGGCCCACCTGG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGAGCTGCTGGCATGCTaGTTAGGCACTCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDELLAC*LGTPGV
Trigger: CACACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGAGCTGCTGGCATGCTaGTTAGGCACTCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTELLAC*LGTPGV
Trigger: CACACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp ACTCCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTCGCTGTCAGTCCTTCTaGGCGCCTCGTGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TPIGPGVPGSPRGPRSPFRCQSF*APRVSR
Trigger: CCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCG...AAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACAAGGGCTTGTATCGCTaGAAAACGTCCCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PRVSFAAPLALWSRWAWNKGLYR*KTSLSA
Trigger: AGCGGAAAGGGACGTTTTCCAGCGATACAAGCCCTT...GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGTGGCTGCCGCTTTGTaGGTGCGCTCCGCTACCATC +
Preference number: 4 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQVAAAL*VRSATI
Trigger: GATGGTAGCGGAGCGCACCCACAAAGCGGCAGCCAC...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCGGCCGTCCGAAAGTaGGCGAGCAGGCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNSAVRK*ASRLSA
Trigger: GGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGGACCAGGAGGTCCTaGTGGGCAGTTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDGTRRS*WAVTSW
Trigger: CCAGGATGTAACTGCCCACCAGGACCTCCTGGTCCC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTGCCGTCCAGCCCAATaGGACCCGGAAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDCRPAQ*DPEIQG
Trigger: TCCCTGGATTTCCGGGTCCCATTGGGCTGGACGGCA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGTCGCCCTTTGGTCCTaGGTGGCCCGGTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNVALWS*VARFAV
Trigger: GACGGCAAACCGGGCCACCCAGGACCAAAGGGCGAC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGGTCCCGGCTGTCCTaGGGGACCCGTCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGSRLS*GTRQTH
Trigger: ATGGGTCTGACGGGTCCCCCAGGACAGCCGGGACCC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATCTCCTTTTTGTCCCTaGGGTCCCGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTSPFCP*GPGCPG
Trigger: CCCAGGACAGCCGGGACCCCAGGGACAAAAAGGAGA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACAGGCAGCAGCCGGTGTaGGTACTCTCCACACTGACC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDRQQPV*VLSTLT
Trigger: GGTCAGTGTGGAGAGTACCCACACCGGCTGCTGCCT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACCTTGGATGCTGGCCTaGCTCTGTTCGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTPWMLA*LCSPWN
Trigger: GTTCCAGGGCGAACAGAGCCAGGCCAGCATCCAAGG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGTGGACCTTGGATGCTaGCCTGGCTCTGTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDVDLGC*PGSVRP
Trigger: AGGGCGAACAGAGCCAGGCCAGCATCCAAGGTCCAC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGCCTGGGGGCCCTGGTaGACCTTGGATGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIAWGPW*TLDAGL
Trigger: CAGGCCAGCATCCAAGGTCCACCAGGGCCCCCAGGC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTGGCCCCATAGGCCCTaGCAGTCCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIWPHRP*QSWVPQ
Trigger: CTGGGGCACCCAGGACTGCCAGGGCCTATGGGGCCA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGTAGCCCTGGATCCCTaGGTCTCCCTTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDVALDP*VSLWSR
Trigger: CCTGGACCAAAGGGAGACCCAGGGATCCAGGGCTAC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGGCTCCATGCTTGCCTaGCATCCCTGGCATGCCCCG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNGSMLA*HPWHAP
Trigger: CGGGGCATGCCAGGGATGCCAGGCAAGCATGGAGCC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACTCCTGGGTCTCCCTTaGTTCCTGGGATCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLLGLP*FLGSLA
Trigger: AGCCAGGGATCCCAGGAACCAAGGGAGACCCAGGAG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGCCCTTGGGGCCATCTaGTCCCTGTTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQALGAI*SLFSSC
Trigger: GCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGC...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGCCCTTGGGGCCATCTaGTCCCTGTTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIALGAI*SLFSSC
Trigger: GCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCTCCCTTGGAGCCCTTaGGGCCATCTGGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDLPWSP*GHLVPV
Trigger: AACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCCTGGAGCTCCAGGTaGGCCAATTTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDPWSSR*ANLPRK
Trigger: CTTCCTGGGCAAATTGGCCCACCTGGAGCTCCAGGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAATTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDLSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGCCCCTCTCGCCCTTTaGTCCCGCTGGGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIAPLAL*SRWAWN
Trigger: GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGCCATCTTCGCCCAATaGGCATGGGGCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTAIFAQ*AWGIQS
Trigger: GGACTGGATGCCCCATGCCCATTGGGCGAAGATGGC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000673681.1
ENST00000673977.1
CDS-3UTR CCA 90 bp CCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: PRVSFAAPLALWSRWAWNLFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGCACCTTTGTCCCCTaGGAGTCCGGGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDGTFVP*ESGSSS
Trigger: ACTGGAAGACCCGGACTCCCAGGGGACAAAGGTGCC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTGTCCAGGCATCCCAATaGCACCTTTGTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PRFPLSPGGPCKPGSPAAVQASQ*HLCPLG
Trigger: TCCCAGGGGACAAAGGTGCCATTGGGATGCCTGGAC...AGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp TCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCCTCACCCTTGGTTCCTaGGATCCCTGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: SPGGPCKPGSPAAPVGPVLTLGS*DPWLTL
Trigger: AAGGGTGAGCCAGGGATCCCAGGAACCAAGGGTGAG...GACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCCCCTTCTCACCCTTaGTTCCTGGGATCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDPPSHP*FLGSLA
Trigger: AGCCAGGGATCCCAGGAACCAAGGGTGAGAAGGGGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR TCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGCGCCTCTGTAACTTaGCACACTCCCTGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGASVT*HTPCGG
Trigger: GCCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCACGTCCGCCTTTTTATaGCCGGGGGTGGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLTSAFL*PGVEPV
Trigger: GACTGGCTCCACCCCCGGTCATAAAAAGGCGGACGT...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR TCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATACCTTGGAGCCCCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNTLEPR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGGGCTCCAAGGT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS-3UTR TCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATCCTTTCTCTCCCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTSFLSR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGGAGAGAAAGGA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR GCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACTGCAGAGCAGTTGGTaGCGCGCTGTCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLQSSW*RAVSPS
Trigger: AGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCTTCCCTTCAAGTGTCTaGAGAGCAGTTGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCFPSSV*RAVGAA
Trigger: CGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAA...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAAGGCTCTATCCAAACTaGGGGGCAGGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIRLYPN*GAGGKG
Trigger: GCCCTTTCCCCCTGCCCCGCAGTTTGGATAGAGCCT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTGCCGCTTTGTGGGTaGGCTCCGCTACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILPLCG*APLPSS
Trigger: AGAGGATGGTAGCGGAGCGCACCCACAAAGCGGCAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGACGCAGCACCCGGGCCTaGAGCTCGGCCGTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: THTGQSKVRGITCSSSLGRSTRA*SSAVRK
Trigger: CTTTCGGACGGCCGAGCTGCAGGCCCGGGTGCTGCG...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGCCGTCTCCATTTGCTaGTCCCCGCGCTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIAVSIC*SPRSAS
Trigger: GGAAGCGGAGCGCGGGGAGCAGCAAATGGAGACGGC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCTGGCAGTCCTGGGTaGCCCAGAGGTCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNPGSPG*PRGPLG
Trigger: ACCAAGTGGACCTCTGGGGCACCCAGGACTGCCAGG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGCCCCCTTGGCTCCATaGTTGCCTGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRAPLAP*LPGIPG
Trigger: GCCAGGGATGCCAGGCAAGCATGGAGCCAAGGGGGC...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCCTTCTCACCCCTCTaGCCCCTCTTTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDPFSPL*PLFPSK
Trigger: TTTGCTGGGAAAGAGGGGGCAGAGGGGTGAGAAGGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR GCA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCACTGGCCATCGACACCTaGTTCTCCCTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGALAIDT*FSLWPW
Trigger: CCAGGGCCAAAGGGAGAAGCAGGTGTCGATGGCCAG...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTGGCCATCGACACCTaGTTCTCCCTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILAIDT*FSLWPW
Trigger: CCAGGGCCAAAGGGAGAAGCAGGTGTCGATGGCCAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCAGCCCAGGAACCTCTaGTCCTGGATTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDQPRNL*SWIALL
Trigger: GAGAAGGGCAATCCAGGAGCAGAGGTTCCTGGGCTG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCGCTGTCAGTCCTTCTaGGCGCCTCGTGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIRCQSF*APRVSR
Trigger: CCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATGTCTGCAGAGCAGTTaGTGCCGCGCTGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTCLQSS*CRAVSP
Trigger: AGGACTGACAGCGCGGCACCAACTGCTCTGCAGACA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGTGGCTGCCGCTTTGTaGGTGCGCTCCGCTACCATC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNVAAAL*VRSATI
Trigger: GATGGTAGCGGAGCGCACCCACAAAGCGGCAGCCAC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGGGACCAGGAGGTCCTaGTGGGCAGTTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIGTRRS*WAVTSW
Trigger: CCAGGATGTAACTGCCCACCAGGACCTCCTGGTCCC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCATGCCGTCCAGCCCAATaGGACCCGGAAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGACRPAQ*DPEIQG
Trigger: TCCCTGGATTTCCGGGTCCCATTGGGCTGGACGGCA...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGTCGCCCTTTGGTCCTaGGTGGCCCGGTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRVALWS*VARFAV
Trigger: GACGGCAAACCGGGCCACCCAGGACCAAAGGGCGAC...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAACCCATGTCGCCCTTTaGTCCTGGGTGGCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTITHVAL*SWVARF
Trigger: AAACCGGGCCACCCAGGACCAAAGGGCGACATGGGT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGACCCATGTCGCCCTTTaGTCCTGGGTGGCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQTHVAL*SWVARF
Trigger: AAACCGGGCCACCCAGGACCAAAGGGCGACATGGGT...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATCTCCTTTTTGTCCCTaGGGTCCCGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTISPFCP*GPGCPG
Trigger: CCCAGGACAGCCGGGACCCCAGGGACAAAAAGGAGA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTAGGCCCTGGCAGTCCTaGGTGCCCCAGAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIRPWQS*VPQRST
Trigger: AGTGGACCTCTGGGGCACCCAGGACTGCCAGGGCCT...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGTAGCCCTGGATCCCTaGGTCTCCCTTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIVALDP*VSLWSR
Trigger: CCTGGACCAAAGGGAGACCCAGGGATCCAGGGCTAC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGTTCCGGGCGCCCCCTTaGCTCCATGCTTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRFRAPP*LHACLA
Trigger: TGCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAA...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTTCCGGGCGCCCCCTTaGCTCCATGCTTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIFRAPP*LHACLA
Trigger: TGCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCTCTGCCTCCTCCAATaGAGTTGCCAGCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: PRFPLSPGGPCKPGSPAALCLLQ*SCQHRL
Trigger: AAGGCGATGCTGGCAACTCCATTGGAGGAGGCAGAG...AGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp TGCTCCTGGATTGCCCTTCTCCCCGGCTTCTCCTTTCTCTCCTGTAAACCTCAGACCTGCTTCTCCCTTTaGCCCTGGGGGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CSWIALLPGFSFLSCKPQTCFSL*PWGPRE
Trigger: CTCCCTGGGCCCCCAGGGCCAAAGGGAGAAGCAGGT...CTGAGGTTTACAGGAGAGAAAGGAGAAGCCGGGGAGAAGGGCAATCCAGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGCCCTTGGGGCCATCTaGTCCCTGTTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNALGAI*SLFSSC
Trigger: GCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAAAGCGTCCGGATCTCCTaGAGAGCCTCATTGATGTTT +
Preference number: 4 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLESVRIS*RASLMF
Trigger: AAACATCAATGAGGCTCTCCAGGAGATCCGGACGCT...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACCCTGGAGCTCCAGGTaGGCCAATTTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIPWSSR*ANLPRK
Trigger: CTTCCTGGGCAAATTGGCCCACCTGGAGCTCCAGGG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCACCCTGGAGCTCCAGGTaGGCCAATTTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGAPWSSR*ANLPRK
Trigger: CTTCCTGGGCAAATTGGCCCACCTGGAGCTCCAGGG...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCTCCCCCTTCTGGCCTaGAATCCCTGGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNLPLLA*NPWSSR
Trigger: CCTGGAGCTCCAGGGATTCCAGGCCAGAAGGGGGAG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACCAATCTCCCCCTTCTaGCCTGGAATCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTPISPF*PGIPGA
Trigger: AGCTCCAGGGATTCCAGGCCAGAAGGGGGAGATTGG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGTGTCCTGGAGGGCCTaGCAGTCCAATCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIVSWRA*QSNLPL
Trigger: AAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACAC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATTCCCCATCGTGTCCTaGAGGGCCTGGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTFPIVS*RAWQSN
Trigger: ATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTTCCCCATCGTGTCCTaGAGGGCCTGGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDFPIVS*RAWQSN
Trigger: ATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACAGGGCCCATGTCTCCTaGTTTACCGCGAGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDRAHVS*FTARSL
Trigger: AAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTCCTGGAGTACCCGGTaGCCCAGGCCTGCCGTCCAA +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIISWSTR*PRPAVQ
Trigger: TTGGACGGCAGGCCTGGGCCACCGGGTACTCCAGGA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp TTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGCATCCGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: FQQPWTGKPSSPNGHGASALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...GGATGCCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGTCCAGGCATCCCAATaGCACCTTTGTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTVQASQ*HLCPLG
Trigger: TCCCAGGGGACAAAGGTGCCATTGGGATGCCTGGAC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGATTCAGGGCAATTATTTaGCTGGAGCGCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGFRAII*LERRAA
Trigger: AGCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAA...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACTCACCCTTGGTTCCTaGGATCCCTGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLTLGS*DPWLTL
Trigger: AAGGGTGAGCCAGGGATCCCAGGAACCAAGGGTGAG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGCCCCCTTCTCACCCTTaGTTCCTGGGATCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQPPSHP*FLGSLA
Trigger: AGCCAGGGATCCCAGGAACCAAGGGTGAGAAGGGGG...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR CCA 90 bp TTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGCATCCGGCCGTGATCCTCTTTaGGTTCAGGGGCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FQQPWTGKPSSPNGHGASGRDPL*VQGLLG
Trigger: CCCCAACAGCCCCTGAACCCAAAGAGGATCACGGCC...GGATGCCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCCCAGTTTTCAGAGTTaGCGAGGCCAGGCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLPSFQS*RGQARS
Trigger: TGAACGAGCCTGGCCTCGCCAACTCTGAAAACTGGG...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR TCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTCTCCCGGCGCCTCCTTaGGTGGAGCTTCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSLPAPP*VELPFL
Trigger: GAGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAG...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR TCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATCCTTTCTCTCCCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTISFLSR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGGAGAGAAAGGA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR TCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCAGTCGCACTGAATTaGGGAGAGGCAGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDPVALN*GEAAAS
Trigger: TGAAGCTGCTGCCTCTCCTCAATTCAGTGCGACTGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398978.8
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTGCAGAGCAGTTGGTaGCGCGCTGTCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILQSSW*RAVSPS
Trigger: AGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATAGGCTCTATCCAAACTaGGGGGCAGGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNRLYPN*GAGGKG
Trigger: GCCCTTTCCCCCTGCCCCGCAGTTTGGATAGAGCCT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTCTGCCGCTTTGTGGGTaGGCTCCGCTACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSLPLCG*APLPSS
Trigger: AGAGGATGGTAGCGGAGCGCACCCACAAAGCGGCAG...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GGAAGCCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGGCCGTCTCCATTTGCTaGTCCCCGCGCTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSLSLLLLHLVLLPPLVQAVSIC*SPRSAS
Trigger: GGAAGCGGAGCGCGGGGAGCAGCAAATGGAGACGGC...CTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCTTGGCTCCATGCTTaGCTGGCATCCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNPWLHA*LASLAC
Trigger: GCATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACCCTTCTCACCCCTCTaGCCCCTCTTTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIPFSPL*PLFPSK
Trigger: TTTGCTGGGAAAGAGGGGGCAGAGGGGTGAGAAGGG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGGCCAGGTTCCCCTCTaGCTCCTCCAATGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNGQVPL*LLQWSC
Trigger: GCAACTCCATTGGAGGAGGCAGAGGGGAACCTGGCC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCTGGCCATCGACACCTaGTTCTCCCTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNLAIDT*FSLWPW
Trigger: CCAGGGCCAAAGGGAGAAGCAGGTGTCGATGGCCAG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNSLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGTCCGGGTCTTCCAGTaGGACCAGGAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIVRVFQ*DQEVLV
Trigger: CACCAGGACCTCCTGGTCCCACTGGAAGACCCGGAC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTTGGCCCTTTACTCCTaGGAGTCCGGGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDLALYS*ESGSSS
Trigger: ACTGGAAGACCCGGACTCCCAGGAGTAAAGGGCCAA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGGACCCCTTCTCGCCTaGTTGGCCCTTTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNGPLLA*LALYSW
Trigger: CCAGGAGTAAAGGGCCAACCAGGCGAGAAGGGGTCC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS-3UTR CCA 90 bp GGAAGCCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGAGGCCCTGGCAGTCCTaGGTGCCCCAGAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: GSLSLLLLHLVLLPPLVQRPWQS*VPQRST
Trigger: AGTGGACCTCTGGGGCACCCAGGACTGCCAGGGCCT...CTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCTTGCCTGGCATCCCTaGCATGCCCCGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNLAWHP*HAPFSL
Trigger: AAGGGAGAACGGGGCATGCCAGGGATGCCAGGCAAG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTTCCCTTCTGCTCCTaGGTCTCCCTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILPFCS*VSLGSW
Trigger: CCAGGAACCAAGGGAGACCCAGGAGCAGAAGGGAAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCTCCCTTGGAGCCCTTaGGGCCATCTGGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNLPWSP*GHLVPV
Trigger: AACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCTCCCCCTTCTGGCCTaGAATCCCTGGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIILPLLA*NPWSSR
Trigger: CCTGGAGCTCCAGGGATTCCAGGCCAGAAGGGGGAG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGTGTCCTGGAGGGCCTaGCAGTCCAATCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNVSWRA*QSNLPL
Trigger: AAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACAC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCAAGGGCCCATGTCTCCTaGTTTACCGCGAGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGARAHVS*FTARSL
Trigger: AAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCT...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGTTCGCCCAATGGGCATaGGGCATCCAGTCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: TCSSSLGLVSHLRPMGMGFAQWA*GIQSVQ
Trigger: CTGGACGGACTGGATGCCCCATGCCCATTGGGCGAA...CCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGCCATCTTCGCCCAATaGGCATGGGGCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNAIFAQ*AWGIQS
Trigger: GGACTGGATGCCCCATGCCCATTGGGCGAAGATGGC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000673681.1
ENST00000673977.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGTCCAGGCATCCCAATaGCACCTTTGTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIVQASQ*HLCPLG
Trigger: TCCCAGGGGACAAAGGTGCCATTGGGATGCCTGGAC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGGGCAATTATTTGGCTaGAGCGCAGAGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDGQLFG*SAELLA
Trigger: TGCCAGCAGCTCTGCGCTCCAGCCAAATAATTGCCC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGGGCAATTATTTGGCTaGAGCGCAGAGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTGQLFG*SAELLA
Trigger: TGCCAGCAGCTCTGCGCTCCAGCCAAATAATTGCCC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTCACCCTTGGTTCCTaGGATCCCTGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILTLGS*DPWLTL
Trigger: AAGGGTGAGCCAGGGATCCCAGGAACCAAGGGTGAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGCAATCCTGCCACTCTaGGTCTGCTCTGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQAILPL*VCSGHH
Trigger: ATGGTGGCCAGAGCAGACCCAGAGTGGCAGGATTGC...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR TCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNWSQSH*IEERQQ
Trigger: CTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCCAGTCGCACTGAATTaGGGAGAGGCAGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLPVALN*GEAAAS
Trigger: TGAAGCTGCTGCCTCTCCTCAATTCAGTGCGACTGG...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTAACGTCCCTTTCCGCTaGTCCCGGCAAAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIINVPFR*SRQRGR
Trigger: CCGTCCTCTTTGCCGGGAGCAGCGGAAAGGGACGTT...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCTGGTGGACCTTGGATaGTGGCCTGGCTCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIILVDLG*WPGSVR
Trigger: GCGAACAGAGCCAGGCCAGCATCCAAGGTCCACCAG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GGAAGCCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGCCTGGCAGTCCTGGGTaGCCCAGAGGTCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: GSLSLLLLHLVLLPPLVQPGSPG*PRGPLG
Trigger: ACCAAGTGGACCTCTGGGGCACCCAGGACTGCCAGG...CTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp CATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGCCTTGGCTCCATGCTTaGCTGGCATCCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: HHLFQQPWTGKPSSPNGQPWLHA*LASLAC
Trigger: GCATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGG...CTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIISLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCCAGGTGGGCCAATTTaGCCAGGAAGACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIPGGPI*PGRPGG
Trigger: GCCTCCTGGTCTTCCTGGGCAAATTGGCCCACCTGG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR GCA 90 bp TTCAGGGCAGTCATTCGACTGGGCCGTGATCCTCTTTGGGTTCAGGGGCTGTTGACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FRAVIRLGRDPLWVQGLLTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...CAACAGCCCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR GCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGAGCTGCTGGCATGCTaGTTAGGCACTCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIELLAC*LGTPGV
Trigger: CACACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGTCTGCAGAGCAGTTaGTGCCGCGCTGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNCLQSS*CRAVSP
Trigger: AGGACTGACAGCGCGGCACCAACTGCTCTGCAGACA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCAGCCCGCACGACCCTaGACTCGGCAGCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDQPARP*TRQPCA
Trigger: GGCGCACGGCTGCCGAGTCCAGGGTCGTGCGGGCTG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCGGCGCCTCCTTGAGTaGAGCTTCCATTTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNRRLLE*SFHFSS
Trigger: GGACGAGAAATGGAAGCTCCACTCAAGGAGGCGCCG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GGAAGCCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGTCCTGGAGATGTCTTTaGGGCCTCCCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLSLLLLHLVLLPPLVQSWRCL*GLPAPP
Trigger: AGGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGA...CTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTGGGCAGTTACATCCTaGAGATGTCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDWAVTS*RCLWGL
Trigger: GAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAACCAGGAGGTCCTGGTaGGCAGTTACATCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTITRRSW*AVTSWR
Trigger: TCTCCAGGATGTAACTGCCCACCAGGACCTCCTGGT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCAACCAGGAGGTCCTGGTaGGCAGTTACATCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGATRRSW*AVTSWR
Trigger: TCTCCAGGATGTAACTGCCCACCAGGACCTCCTGGT...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTACCCATGTCGCCCTTTaGTCCTGGGTGGCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIITHVAL*SWVARF
Trigger: AAACCGGGCCACCCAGGACCAAAGGGCGACATGGGT...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTGGCTCTGTTCGCCCTaGAACGTCCGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDWLCSP*NVRLFM
Trigger: CATAAAAAGGCGGACGTTCCAGGGCGAACAGAGCCA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATGGCTCTGTTCGCCCTaGAACGTCCGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTWLCSP*NVRLFM
Trigger: CATAAAAAGGCGGACGTTCCAGGGCGAACAGAGCCA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCCTTGGATGCTGGCCTaGCTCTGTTCGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIPWMLA*LCSPWN
Trigger: GTTCCAGGGCGAACAGAGCCAGGCCAGCATCCAAGG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTCTGCCTCCTCCAATaGAGTTGCCAGCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILCLLQ*SCQHRL
Trigger: AAGGCGATGCTGGCAACTCCATTGGAGGAGGCAGAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCAATCTCCCCCTTCTaGCCTGGAATCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNPISPF*PGIPGA
Trigger: AGCTCCAGGGATTCCAGGCCAGAAGGGGGAGATTGG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGTGTCCTGGAGGGCCTaGCAGTCCAATCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIVSWRA*QSNLPL
Trigger: AAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACAC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATAGGGCCCATGTCTCCTaGTTTACCGCGAGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNRAHVS*FTARSL
Trigger: AAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATAACTCCAATTGGTCCTaGAGTACCCGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNNSNWS*STRWPR
Trigger: CCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTTCGCCCAATGGGCATaGGGCATCCAGTCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIFAQWA*GIQSVQ
Trigger: CTGGACGGACTGGATGCCCCATGCCCATTGGGCGAA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000673681.1
ENST00000673977.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDLAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGGAACAGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PFSPFAPSSPASPFGPGTGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...TGTTCCTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTCCCTTCTCGCCTGGTTaGCCCTTTACTCCCACACGT +
Preference number: 4 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSPFSPG*PFTPTR
Trigger: ACGTGTGGGAGTAAAGGGCCAACCAGGCGAGAAGGG...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGACCCCTTCTCGCCTaGTTGGCCCTTTACTCCCAC +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGPLLA*LALYSH
Trigger: GTGGGAGTAAAGGGCCAACCAGGCGAGAAGGGGTCC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645393.2
3UTR CAA 72 bp CTTTTTATGACCGGGGGTGGAGCCAGTCGCACTGAATaGAGGAGAGGCAGCAGCCGGTGTGGGTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFMTGGGASRTE*RRGSSRCGYSP
Trigger: TGGAGAGTACCCACACCGGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCACCCCCGGTCATAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674008.1
ENST00000674040.1
CDS-3UTR TCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRWSQSH*IEERQQ
Trigger: CTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCA...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR TCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGACAGCCCAGGAACCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: THTGQSKVRGITCSSSLGQPRNR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGTTCCTGGGCTG...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR TCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGCCTGGGTGCCCCACCTaGTGCCTAGAGATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGMPGCPT*CLEMSK
Trigger: CTTGCTCATCTCTAGGCATCAGGTGGGGCACCCAGG...CATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACTCCTCCAATGGAGTTaGCAGCATCGCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTILLQWS*QHRLSL
Trigger: GAGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTCTCCTCCAATGGAGTTaGCAGCATCGCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLLLQWS*QHRLSL
Trigger: GAGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAG...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGTGGATTAGGCAATCCTaGCACTCTGGGTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQWIRQS*HSGSAL
Trigger: CAGAGCAGACCCAGAGTGGCAGGATTGCCTAATCCA...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGGGACTGAAACCCTTTTaGTTCACAACCAAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLGLKPF*FTTKLA
Trigger: GGCAAGCTTGGTTGTGAAGCAAAAGGGTTTCAGTCC...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGGCAGAGGTGGGTCGTaGCGGCTGGCGAGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDGRGGS*RLARSA
Trigger: TGCGCTCCTCGCCAGCCGCCACGACCCACCTCTGCC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTGTCTGCAGAGCAGTTaGTGCCGCGCTGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIICLQSS*CRAVSP
Trigger: AGGACTGACAGCGCGGCACCAACTGCTCTGCAGACA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp TGCTCCTGGATTGCCCTTCTCCCCGGCTTCTCCTTTCTCTCCTGTAAACCTCAGTGTCTGCAGAGCAGTTaGTGCCGCGCTGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CSWIALLPGFSFLSCKPQCLQSS*CRAVSP
Trigger: AGGACTGACAGCGCGGCACCAACTGCTCTGCAGACA...CTGAGGTTTACAGGAGAGAAAGGAGAAGCCGGGGAGAAGGGCAATCCAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAAAGGGCTTGTATCGCTaGAAAACGTCCCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTKGLYR*KTSLSA
Trigger: AGCGGAAAGGGACGTTTTCCAGCGATACAAGCCCTT...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACAAGGGCTTGTATCGCTaGAAAACGTCCCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDKGLYR*KTSLSA
Trigger: AGCGGAAAGGGACGTTTTCCAGCGATACAAGCCCTT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GGAAGCCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGCTCCCTTGGAGCCCTTaGGGCCATCTGGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GSLSLLLLHLVLLPPLVQLPWSP*GHLVPV
Trigger: AACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAG...CTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAAGCGTCCGGATCTCCTaGAGAGCCTCATTGATGTTT +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTSVRIS*RASLMF
Trigger: AAACATCAATGAGGCTCTCCAGGAGATCCGGACGCT...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACAGCGTCCGGATCTCCTaGAGAGCCTCATTGATGTTT +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDSVRIS*RASLMF
Trigger: AAACATCAATGAGGCTCTCCAGGAGATCCGGACGCT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGGAACACTCCCCCTTCTGGCCTaGAATCCCTGGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PFSPFAPSSPASPFGPGTLPLLA*NPWSSR
Trigger: CCTGGAGCTCCAGGGATTCCAGGCCAGAAGGGGGAG...TGTTCCTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGCCAATCTCCCCCTTCTaGCCTGGAATCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HHLFQQPWTGKPSSPNGQPISPF*PGIPGA
Trigger: AGCTCCAGGGATTCCAGGCCAGAAGGGGGAGATTGG...CTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGTTCCCCATCGTGTCCTaGAGGGCCTGGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRFPIVS*RAWQSN
Trigger: ATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAA...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTAACTCCAATTGGTCCTaGAGTACCCGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIINSNWS*STRWPR
Trigger: CCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTT...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GGTCCAAGGCCCAGTTTTCAGAGTTGGCGAGGCCAGGCTCGTTCAGGGCAGTCATTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: GPRPSFQSWRGQARSGQSLFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...TGACTGCCCTGAACGAGCCTGGCCTCGCCAACTCTGAAAACTGGGCCTTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: THELASTSVLAGPLWHQDLFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTGGGCAATTATTTGGCTaGAGCGCAGAGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSGQLFG*SAELLA
Trigger: TGCCAGCAGCTCTGCGCTCCAGCCAAATAATTGCCC...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDSGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCCCTTCTCGCCTGGTTaGCCCTTTACTCCCACACGT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIPFSPG*PFTPTR
Trigger: ACGTGTGGGAGTAAAGGGCCAACCAGGCGAGAAGGG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645393.2
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGGTCCTGGAGTACCCTaGGAAGGGGAAAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNGPGVP*EGERKQ
Trigger: CTGCTTTCTTTCCCCTTCCCAGGGTACTCCAGGACC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR GCA 90 bp GGAAGCCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGCTGCAGAGCAGTTGGTaGCGCGCTGTCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSLSLLLLHLVLLPPLVQLQSSW*RAVSPS
Trigger: AGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAG...CTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAAAAGGCGACAGCCGCTaGCAAAAGGCTCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIKGDSR*QKALSK
Trigger: TTTGGATAGAGCCTTTTGGCAGCGGCTGTCGCCTTT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGATCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: THTGQSKVRGITCSSSLGSLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTTGGGCAGTTACATCCTaGAGATGTCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSWAVTS*RCLWGL
Trigger: GAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCA...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGGCAGTTACATCCTaGAGATGTCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNWAVTS*RCLWGL
Trigger: GAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTTGGCTCTGTTCGCCCTaGAACGTCCGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSWLCSP*NVRLFM
Trigger: CATAAAAAGGCGGACGTTCCAGGGCGAACAGAGCCA...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp CCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGGAACACCTTGGATGCTGGCCTaGCTCTGTTCGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PFSPFAPSSPASPFGPGTPWMLA*LCSPWN
Trigger: GTTCCAGGGCGAACAGAGCCAGGCCAGCATCCAAGG...TGTTCCTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGCCCCTCTCGCCCTTTaGTCCCGCTGGGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDAPLAL*SRWAWN
Trigger: GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 4 (lower is better)
Translates to: TCSSSLGLVSHLRPMGMGLAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...CCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp CCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGGAACAAGGAACCTCTGCTCCTaGATTGCCCTTCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PFSPFAPSSPASPFGPGTRNLCS*IALLPG
Trigger: GCCGGGGAGAAGGGCAATCCAGGAGCAGAGGTTCCT...TGTTCCTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTAATCCAGGCGCTCCTTaGTCTCCCTTATCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLNPGAP*SPLSPL
Trigger: TAAAGGGGATAAGGGAGACCAAGGAGCGCCTGGATT...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAAATCCAGGCGCTCCTTaGTCTCCCTTATCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTINPGAP*SPLSPL
Trigger: TAAAGGGGATAAGGGAGACCAAGGAGCGCCTGGATT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR TCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATTCTCGTCCAGCAGTTaGTTGACTCGTCCCAAAATA +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTFSSSS*LTRPKI
Trigger: TATTTTGGGACGAGTCAATCAACTGCTGGACGAGAA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGGGTACTCTCCACACTaGCCCTTTTCTCCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIGYSPH*PFSPFC
Trigger: ACAAAAAGGAGAAAAGGGTCAGTGTGGAGAGTACCC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGGTACTCTCCACACTaGCCCTTTTCTCCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQGYSPH*PFSPFC
Trigger: ACAAAAAGGAGAAAAGGGTCAGTGTGGAGAGTACCC...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR TCA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACCTGGAGAGCCTCATTaGTGTTTCCATTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: HELASTSVLAGPLWHQDTPGEPH*CFHCNP
Trigger: TGGATTACAATGGAAACATCAATGAGGCTCTCCAGG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGCCGTCTCCATTTGCTaGTCCCCGCGCTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDAVSIC*SPRSAS
Trigger: GGAAGCGGAGCGCGGGGAGCAGCAAATGGAGACGGC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCTGGGTGGCCCGGTTTaGCGTCCAGCCCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDLGGPV*RPAQWD
Trigger: GTCCCATTGGGCTGGACGGCAAACCGGGCCACCCAG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATAGGCCCTGGCAGTCCTaGGTGCCCCAGAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDRPWQS*VPQRST
Trigger: AGTGGACCTCTGGGGCACCCAGGACTGCCAGGGCCT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTCCTGGAGTACCCGGTaGCCCAGGCCTGCCGTCCAA +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDSWSTR*PRPAVQ
Trigger: TTGGACGGCAGGCCTGGGCCACCGGGTACTCCAGGA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIILAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGACCTCAGGAGCCCAGCTaGATTAGGCAATCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: THTGQSKVRGITCSSSLGPQEPS*IRQSCH
Trigger: GTGGCAGGATTGCCTAATCCAGCTGGGCTCCTGAGG...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CCA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGAGGGCAGTCATTCGACTaGGCCGTGATCCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: THTGQSKVRGITCSSSLGGQSFD*AVILFG
Trigger: CCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCC...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR TCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATTCTCGTCCAGCAGTTaGTTGACTCGTCCCAAAATA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIFSSSS*LTRPKI
Trigger: TATTTTGGGACGAGTCAATCAACTGCTGGACGAGAA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGGGTACTCTCCACACTaGCCCTTTTCTCCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNGYSPH*PFSPFC
Trigger: ACAAAAAGGAGAAAAGGGTCAGTGTGGAGAGTACCC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACCTGGAGAGCCTCATTaGTGTTTCCATTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIPGEPH*CFHCNP
Trigger: TGGATTACAATGGAAACATCAATGAGGCTCTCCAGG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR TCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCAGCCCAGGAACCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDQPRNR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGTTCCTGGGCTG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398975.6
ENST00000673681.1
CDS-3UTR GCA 90 bp CATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGAAAGGCGACAGCCGCTaGCAAAAGGCTCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: HHLFQQPWTGKPSSPNGQKGDSR*QKALSK
Trigger: TTTGGATAGAGCCTTTTGGCAGCGGCTGTCGCCTTT...CTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCTGGCAGTCCTGGGTaGCCCAGAGGTCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPGSPG*PRGPLG
Trigger: ACCAAGTGGACCTCTGGGGCACCCAGGACTGCCAGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGTGGCTGCCGCTTTGTaGGTGCGCTCCGCTACCATC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDVAAAL*VRSATI
Trigger: GATGGTAGCGGAGCGCACCCACAAAGCGGCAGCCAC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGGCCGCGGGCACCGGTaGCTGCCGCTTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAGRGHR*LPLCGC
Trigger: GCACCCACAAAGCGGCAGCCACCGGTGCCCGCGGCC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGGCCGCGGGCACCGGTaGCTGCCGCTTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHGRGHR*LPLCGC
Trigger: GCACCCACAAAGCGGCAGCCACCGGTGCCCGCGGCC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTCCTGGAGATGTCTTTaGGGCCTCCCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDSWRCL*GLPAPP
Trigger: AGGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGTCCGGGTCTTCCAGTaGGACCAGGAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDVRVFQ*DQEVLV
Trigger: CACCAGGACCTCCTGGTCCCACTGGAAGACCCGGAC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGGGGCCTGGGGGCCCTaGTGGACCTTGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTGAWGP*WTLDAG
Trigger: GCCAGCATCCAAGGTCCACCAGGGCCCCCAGGCCCC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCTCCCCCTTCTGGCCTaGAATCCCTGGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDLPLLA*NPWSSR
Trigger: CCTGGAGCTCCAGGGATTCCAGGCCAGAAGGGGGAG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIILFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTTCAGGGCAATTATTTaGCTGGAGCGCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIFRAII*LERRAA
Trigger: AGCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTAATCCAGGCGCTCCTTaGTCTCCCTTATCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIINPGAP*SPLSPL
Trigger: TAAAGGGGATAAGGGAGACCAAGGAGCGCCTGGATT...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGAACTCCAATTGGTCCTaGAGTACCCTGGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGMNSNWS*STLGRG
Trigger: TCCCCTTCCCAGGGTACTCCAGGACCAATTGGAGTT...CATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR TCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGCGGCACGGATCGGATaGGCAATCCGTGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDAARIG*AIRATS
Trigger: GGAAGTAGCACGGATTGCTCATCCGATCCGTGCCGC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS-3UTR TCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCAGTGGGCGAGCAGGCTaGGTGCCAGCGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTSGRAG*VPASRG
Trigger: CCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCTCCCGGCGCCTCCTTaGGTGGAGCTTCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDLPAPP*VELPFL
Trigger: GAGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGGCCGCGGGGACCAATaGTGGACAGCCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTGRGDQ*WTAQRL
Trigger: GAGACGCTGGGCTGTCCATCATTGGTCCCCGCGGCC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGGTACTCTCCACACTaGCCCTTTTCTCCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGYSPH*PFSPFC
Trigger: ACAAAAAGGAGAAAAGGGTCAGTGTGGAGAGTACCC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATAGGCTCTATCCAAACTaGGGGGCAGGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDRLYPN*GAGGKG
Trigger: GCCCTTTCCCCCTGCCCCGCAGTTTGGATAGAGCCT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCGCAGCACCCGGGCCTaGAGCTCGGCCGTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHRSTRA*SSAVRK
Trigger: CTTTCGGACGGCCGAGCTGCAGGCCCGGGTGCTGCG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACCGCAGCACCCGGGCCTaGAGCTCGGCCGTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYRSTRA*SSAVRK
Trigger: CTTTCGGACGGCCGAGCTGCAGGCCCGGGTGCTGCG...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCAGGTGGGCCAATTTaGCCAGGAAGACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPGGPI*PGRPGG
Trigger: GCCTCCTGGTCTTCCTGGGCAAATTGGCCCACCTGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGCAGAGCTGCTGGCATaGTGCTTAGGCACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDAELLA*CLGTPG
Trigger: ACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTCTGC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGGCAGAGGTGGGTCGTaGCGGCTGGCGAGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYGRGGS*RLARSA
Trigger: TGCGCTCCTCGCCAGCCGCCACGACCCACCTCTGCC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCAGCCCGCACGACCCTaGACTCGGCAGCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMQPARP*TRQPCA
Trigger: GGCGCACGGCTGCCGAGTCCAGGGTCGTGCGGGCTG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTGCCGTCCAGCCCAATaGGACCCGGAAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDCRPAQ*DPEIQG
Trigger: TCCCTGGATTTCCGGGTCCCATTGGGCTGGACGGCA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTCTCCTTTTTGTCCCTaGGGTCCCGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDSPFCP*GPGCPG
Trigger: CCCAGGACAGCCGGGACCCCAGGGACAAAAAGGAGA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGTGGACCTTGGATGCTaGCCTGGCTCTGTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDVDLGC*PGSVRP
Trigger: AGGGCGAACAGAGCCAGGCCAGCATCCAAGGTCCAC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGTAGCCCTGGATCCCTaGGTCTCCCTTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDVALDP*VSLWSR
Trigger: CCTGGACCAAAGGGAGACCCAGGGATCCAGGGCTAC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCTCCTGGGTCTCCCTTaGTTCCTGGGATCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDLLGLP*FLGSLA
Trigger: AGCCAGGGATCCCAGGAACCAAGGGAGACCCAGGAG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCCTGGAGCTCCAGGTaGGCCAATTTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPWSSR*ANLPRK
Trigger: CTTCCTGGGCAAATTGGCCCACCTGGAGCTCCAGGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCTGGCCTGGAATCCCTaGAGCTCCAGGTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDLAWNP*SSRWAN
Trigger: ATTGGCCCACCTGGAGCTCCAGGGATTCCAGGCCAG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGTGTCCTGGAGGGCCTaGCAGTCCAATCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDVSWRA*QSNLPL
Trigger: AAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACAC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDLSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCTTGGATGCTGGCCTaGCTCTGTTCGCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPWMLA*LCSPFR
Trigger: CCTGAAGGGCGAACAGAGCCAGGCCAGCATCCAAGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354547.7
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHSGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGGTCCAGGAACACCTTaGAGCCCCTCTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDGPGTP*SPSAPG
Trigger: TCCAGGAGCAGAGGGGCTCCAAGGTGTTCCTGGACC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673768.1
CDS-3UTR TCA 90 bp CATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGTTCTCGTCCAGCAGTTaGTTGACTCGTCCCAAAATA +
Preference number: 4 (lower is better)
Translates to: HHLFQQPWTGKPSSPNGQFSSSS*LTRPKI
Trigger: TATTTTGGGACGAGTCAATCAACTGCTGGACGAGAA...CTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR TCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGGCCGCGGGGACCAATaGTGGACAGCCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYGRGDQ*WTAQRL
Trigger: GAGACGCTGGGCTGTCCATCATTGGTCCCCGCGGCC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGCCTGGAGAGCCTCATTaGTGTTTCCATTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRPGEPH*CFHCNP
Trigger: TGGATTACAATGGAAACATCAATGAGGCTCTCCAGG...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR TCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTCCTTTCTCTCCCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDSFLSR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGGAGAGAAAGGA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR TCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCATTCGACTGGGCCGTaGTCCTCTTTGGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDHSTGP*SSLGSG
Trigger: CCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGCGGGCACCGGTGGCTaGCGCTTTGTGGGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMAGTGG*RFVGAL
Trigger: GAGCGCACCCACAAAGCGGCAGCCACCGGTGCCCGC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCGCAGCACCCGGGCCTaGAGCTCGGCCGTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMRSTRA*SSAVRK
Trigger: CTTTCGGACGGCCGAGCTGCAGGCCCGGGTGCTGCG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCTGGGTGGCCCGGTTTaGCGTCCAGCCCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTLGGPV*RPAQWD
Trigger: GTCCCATTGGGCTGGACGGCAAACCGGGCCACCCAG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCCCATGGGCAGAGGTaGGTCGTGGCGGCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPHGQR*VVAAGE
Trigger: CTCGCCAGCCGCCACGACCCACCTCTGCCCATGGGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGGGTCCCGGCTGTCCTaGGGGACCCGTCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHGSRLS*GTRQTH
Trigger: ATGGGTCTGACGGGTCCCCCAGGACAGCCGGGACCC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGCCTGGGGGCCCTGGTaGACCTTGGATGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHAWGPW*TLDAGL
Trigger: CAGGCCAGCATCCAAGGTCCACCAGGGCCCCCAGGC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTGGCCCCATAGGCCCTaGCAGTCCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAWPHRP*QSWVPQ
Trigger: CTGGGGCACCCAGGACTGCCAGGGCCTATGGGGCCA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGGCTCCATGCTTGCCTaGCATCCCTGGCATGCCCCG +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTGSMLA*HPWHAP
Trigger: CGGGGCATGCCAGGGATGCCAGGCAAGCATGGAGCC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCACCTGCTTCTCCCTTTaGCCCTGGGGGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTTCFSL*PWGPRE
Trigger: CTCCCTGGGCCCCCAGGGCCAAAGGGAGAAGCAGGT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCAATCTCCCCCTTCTaGCCTGGAATCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPISPF*PGIPGA
Trigger: AGCTCCAGGGATTCCAGGCCAGAAGGGGGAGATTGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTTCCCCATCGTGTCCTaGAGGGCCTGGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDFPIVS*RAWQSN
Trigger: ATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATAGGGCCCATGTCTCCTaGTTTACCGCGAGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDRAHVS*FTARSL
Trigger: AAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATAACTCCAATTGGTCCTaGAGTACCCGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDNSNWS*STRWPR
Trigger: CCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGTCCAGGCATCCCAATaGCACCTTTGTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDVQASQ*HLCPLG
Trigger: TCCCAGGGGACAAAGGTGCCATTGGGATGCCTGGAC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTCCGGGAGGCCCCTCTaGCCCTGGCAGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMSGRPL*PWQPRN
Trigger: GTTCCTGGGCTGCCAGGGCCAGAGGGGCCTCCCGGA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR TCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGGCGCCTCTGTAACTTaGCACACTCCCTGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAGASVT*HTPCGG
Trigger: GCCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGGCGCCTCTGTAACTTaGCACACTCCCTGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYGASVT*HTPCGG
Trigger: GCCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTTCCCTTCAAGTGTCTaGAGAGCAGTTGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDFPSSV*RAVGAA
Trigger: CGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCTGGGTGGCCCGGTTTaGCGTCCAGCCCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHLGGPV*RPAQWD
Trigger: GTCCCATTGGGCTGGACGGCAAACCGGGCCACCCAG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGCCCCCTTGGCTCCATaGTTGCCTGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYAPLAP*LPGIPG
Trigger: GCCAGGGATGCCAGGCAAGCATGGAGCCAAGGGGGC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp AAACCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGATGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 4 (lower is better)
Translates to: KPRCPRFPLSPGGPCKPGCAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...TCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACCGCTGTCAGTCCTTCTaGGCGCCTCGTGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYRCQSF*APRVSR
Trigger: CCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCG...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCGCTGTCAGTCCTTCTaGGCGCCTCGTGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELARCQSF*APRVSR
Trigger: CCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTCGGCCGTCCGAAAGTaGGCGAGCAGGCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELASAVRK*ASRLSA
Trigger: GGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTCCTGGAGATGTCTTTaGGGCCTCCCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTSWRCL*GLPAPP
Trigger: AGGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGTCGCCCTTTGGTCCTaGGTGGCCCGGTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYVALWS*VARFAV
Trigger: GACGGCAAACCGGGCCACCCAGGACCAAAGGGCGAC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGGGTCCCGGCTGTCCTaGGGGACCCGTCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMGSRLS*GTRQTH
Trigger: ATGGGTCTGACGGGTCCCCCAGGACAGCCGGGACCC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACAGGCCCTGGCAGTCCTaGGTGCCCCAGAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHRPWQS*VPQRST
Trigger: AGTGGACCTCTGGGGCACCCAGGACTGCCAGGGCCT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTGGCCCCATAGGCCCTaGCAGTCCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMWPHRP*QSWVPQ
Trigger: CTGGGGCACCCAGGACTGCCAGGGCCTATGGGGCCA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGGCTCCATGCTTGCCTaGCATCCCTGGCATGCCCCG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHGSMLA*HPWHAP
Trigger: CGGGGCATGCCAGGGATGCCAGGCAAGCATGGAGCC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCACCTGCTTCTCCCTTTaGCCCTGGGGGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELATCFSL*PWGPRE
Trigger: CTCCCTGGGCCCCCAGGGCCAAAGGGAGAAGCAGGT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGCCCTTGGGGCCATCTaGTCCCTGTTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTALGAI*SLFSSC
Trigger: GCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGCCCCTCTCGCCCTTTaGTCCCGCTGGGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMAPLAL*SRWAWN
Trigger: GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGGTCCAGGAACACCTTaGAGCCCCGGAGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAGPGTP*SPGGPG
Trigger: TCCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTGGGTGGCCCGGTTTaGCGTCCAGCCCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLGGPV*RPAQWD
Trigger: GTCCCATTGGGCTGGACGGCAAACCGGGCCACCCAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCCTGGCAGTCCTGGGTaGCCCAGAGGTCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHPGSPG*PRGPLG
Trigger: ACCAAGTGGACCTCTGGGGCACCCAGGACTGCCAGG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTGGCATCCCTGGCATaGCCCGTTCTCCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLASLA*PVLPSG
Trigger: GCCGGAAGGGAGAACGGGGCATGCCAGGGATGCCAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTSLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCCAGGTGGGCCAATTTaGCCAGGAAGACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTPGGPI*PGRPGG
Trigger: GCCTCCTGGTCTTCCTGGGCAAATTGGCCCACCTGG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTCCTGGAGATGTCTTTaGGGCCTCCCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELASWRCL*GLPAPP
Trigger: AGGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGTCCGGGTCTTCCAGTaGGACCAGGAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHVRVFQ*DQEVLV
Trigger: CACCAGGACCTCCTGGTCCCACTGGAAGACCCGGAC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTGCCGTCCAGCCCAATaGGACCCGGAAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTCRPAQ*DPEIQG
Trigger: TCCCTGGATTTCCGGGTCCCATTGGGCTGGACGGCA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGTCGCCCTTTGGTCCTaGGTGGCCCGGTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMVALWS*VARFAV
Trigger: GACGGCAAACCGGGCCACCCAGGACCAAAGGGCGAC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGTGGACCTTGGATGCTaGCCTGGCTCTGTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTVDLGC*PGSVRP
Trigger: AGGGCGAACAGAGCCAGGCCAGCATCCAAGGTCCAC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCTTGCCTGGCATCCCTaGCATGCCCCGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTLAWHP*HAPFSL
Trigger: AAGGGAGAACGGGGCATGCCAGGGATGCCAGGCAAG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTTCCGGGCGCCCCCTTaGCTCCATGCTTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMFRAPP*LHACLA
Trigger: TGCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGCCCTTGGGGCCATCTaGTCCCTGTTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAALGAI*SLFSSC
Trigger: GCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCTCCCCCTTCTGGCCTaGAATCCCTGGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELALPLLA*NPWSSR
Trigger: CCTGGAGCTCCAGGGATTCCAGGCCAGAAGGGGGAG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTLSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTTCGCCCAATGGGCATaGGGCATCCAGTCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTFAQWA*GIQSVQ
Trigger: CTGGACGGACTGGATGCCCCATGCCCATTGGGCGAA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000673681.1
ENST00000673977.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDLAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR TCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACACGTCCGCCTTTTTATaGCCGGGGGTGGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHTSAFL*PGVEPV
Trigger: GACTGGCTCCACCCCCGGTCATAAAAAGGCGGACGT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCACGTCCGCCTTTTTATaGCCGGGGGTGGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELATSAFL*PGVEPV
Trigger: GACTGGCTCCACCCCCGGTCATAAAAAGGCGGACGT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTCCTTTCTCTCCCGGTaGGCCTGCTTGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTSFLSR*ACLSCL
Trigger: GAGACAGGACAAGCAGGCTCACCGGGAGAGAAAGGA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR GCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCTGCAGAGCAGTTGGTaGCGCGCTGTCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTLQSSW*RAVSPS
Trigger: AGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAACGTCCCTTTCCGCTaGTCCCGGCAAAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELANVPFR*SRQRGR
Trigger: CCGTCCTCTTTGCCGGGAGCAGCGGAAAGGGACGTT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACAACGTCCCTTTCCGCTaGTCCCGGCAAAGAGGACGG +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYNVPFR*SRQRGR
Trigger: CCGTCCTCTTTGCCGGGAGCAGCGGAAAGGGACGTT...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCATAGCCGTCTCCATTTaGTGCTCCCCGCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAIAVSI*CSPRSA
Trigger: AGCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTAT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATAGCCGTCTCCATTTaGTGCTCCCCGCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHIAVSI*CSPRSA
Trigger: AGCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTAT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCTGGTGGACCTTGGATaGTGGCCTGGCTCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELALVDLG*WPGSVR
Trigger: GCGAACAGAGCCAGGCCAGCATCCAAGGTCCACCAG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCCTTGGCTCCATGCTTaGCTGGCATCCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAPWLHA*LASLAC
Trigger: GCATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGGCCAGGTTCCCCTCTaGCTCCTCCAATGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAGQVPL*LLQWSC
Trigger: GCAACTCCATTGGAGGAGGCAGAGGGGAACCTGGCC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACTCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYSLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTCCCTGTTCTCCAGCTaGTCCACGCTCCCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHSLFSS*STLPLV
Trigger: GACAAGGGGGAGCGTGGAGCAGCTGGAGAACAGGGA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCACCAGGAAGCCCAGCTaGTCCCGTTGGTCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTTRKPS*SRWSCH
Trigger: ATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGCAGAGCTGCTGGCATaGTGCTTAGGCACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHAELLA*CLGTPG
Trigger: ACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTCTGC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR GCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCACCTTGGAGCCCCTCTaGTCCTGGATTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTTLEPL*SWIALL
Trigger: GAGAAGGGCAATCCAGGAGCAGAGGGGCTCCAAGGT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673768.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGTGGCTGCCGCTTTGTaGGTGCGCTCCGCTACCATC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMVAAAL*VRSATI
Trigger: GATGGTAGCGGAGCGCACCCACAAAGCGGCAGCCAC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCGGCGCCTCCTTGAGTaGAGCTTCCATTTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTRRLLE*SFHFSS
Trigger: GGACGAGAAATGGAAGCTCCACTCAAGGAGGCGCCG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGGGACCAGGAGGTCCTaGTGGGCAGTTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHGTRRS*WAVTSW
Trigger: CCAGGATGTAACTGCCCACCAGGACCTCCTGGTCCC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGTCCGGGTCTTCCAGTaGGACCAGGAGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMVRVFQ*DQEVLV
Trigger: CACCAGGACCTCCTGGTCCCACTGGAAGACCCGGAC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTGCCGTCCAGCCCAATaGGACCCGGAAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHCRPAQ*DPEIQG
Trigger: TCCCTGGATTTCCGGGTCCCATTGGGCTGGACGGCA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACACCCATGTCGCCCTTTaGTCCTGGGTGGCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYTHVAL*SWVARF
Trigger: AAACCGGGCCACCCAGGACCAAAGGGCGACATGGGT...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACACCCATGTCGCCCTTTaGTCCTGGGTGGCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHTHVAL*SWVARF
Trigger: AAACCGGGCCACCCAGGACCAAAGGGCGACATGGGT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACTCTCCTTTTTGTCCCTaGGGTCCCGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYSPFCP*GPGCPG
Trigger: CCCAGGACAGCCGGGACCCCAGGGACAAAAAGGAGA...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGGCAGCAGCCGGTGTaGGTACTCTCCACACTGACC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELARQQPV*VLSTLT
Trigger: GGTCAGTGTGGAGAGTACCCACACCGGCTGCTGCCT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGTAGCCCTGGATCCCTaGGTCTCCCTTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAVALDP*VSLWSR
Trigger: CCTGGACCAAAGGGAGACCCAGGGATCCAGGGCTAC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGTAGCCCTGGATCCCTaGGTCTCCCTTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYVALDP*VSLWSR
Trigger: CCTGGACCAAAGGGAGACCCAGGGATCCAGGGCTAC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACCTTGCCTGGCATCCCTaGCATGCCCCGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYLAWHP*HAPFSL
Trigger: AAGGGAGAACGGGGCATGCCAGGGATGCCAGGCAAG...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCTTGCCTGGCATCCCTaGCATGCCCCGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHLAWHP*HAPFSL
Trigger: AAGGGAGAACGGGGCATGCCAGGGATGCCAGGCAAG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGCCCTTGGGGCCATCTaGTCCCTGTTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMALGAI*SLFSSC
Trigger: GCAGCTGGAGAACAGGGACCAGATGGCCCCAAGGGC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCTCCCTTGGAGCCCTTaGGGCCATCTGGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELALPWSP*GHLVPV
Trigger: AACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCTCCCTTGGAGCCCTTaGGGCCATCTGGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHLPWSP*GHLVPV
Trigger: AACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATAGCGTCCGGATCTCCTaGAGAGCCTCATTGATGTTT +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDSVRIS*RASLMF
Trigger: AAACATCAATGAGGCTCTCCAGGAGATCCGGACGCT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCCCTGGAGCTCCAGGTaGGCCAATTTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAPWSSR*ANLPRK
Trigger: CTTCCTGGGCAAATTGGCCCACCTGGAGCTCCAGGG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCTGGCCTGGAATCCCTaGAGCTCCAGGTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELALAWNP*SSRWAN
Trigger: ATTGGCCCACCTGGAGCTCCAGGGATTCCAGGCCAG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCCAATCTCCCCCTTCTaGCCTGGAATCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTPISPF*PGIPGA
Trigger: AGCTCCAGGGATTCCAGGCCAGAAGGGGGAGATTGG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGTGTCCTGGAGGGCCTaGCAGTCCAATCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAVSWRA*QSNLPL
Trigger: AAGGGGGAGATTGGACTGCCAGGCCCTCCAGGACAC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTTCCCCATCGTGTCCTaGAGGGCCTGGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTFPIVS*RAWQSN
Trigger: ATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCAGGGCCCATGTCTCCTaGTTTACCGCGAGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTRAHVS*FTARSL
Trigger: AAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCTCTCCTGGGCTCCCTaGGTGCCCGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELALSWAP*VPVFSL
Trigger: AAGGGAGAAAACGGGCACCCAGGGAGCCCAGGAGAG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTTCCCCCTTCTCTCCTaGGCTCCCTGGGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMFPLLS*APWVPV
Trigger: AACGGGCACCCAGGGAGCCCAGGAGAGAAGGGGGAA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCCAGCTGCTCCCGTTaGTCCTGTCATCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPSCSR*SCHPRV
Trigger: GACCCTGGGATGACAGGACCAACGGGAGCAGCTGGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGCCATCTTCGCCCAATaGGCATGGGGCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAAIFAQ*AWGIQS
Trigger: GGACTGGATGCCCCATGCCCATTGGGCGAAGATGGC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000673681.1
ENST00000673977.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDLFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCACCTCAGTTCTGGCTaGCCCCCTTTGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHHLSSG*PPLAPG
Trigger: TCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGGCACCTTTGTCCCCTaGGAGTCCGGGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAGTFVP*ESGSSS
Trigger: ACTGGAAGACCCGGACTCCCAGGGGACAAAGGTGCC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCCTTGGATGCTGGCCTaGCTCTGTTCGCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHPWMLA*LCSPFR
Trigger: CCTGAAGGGCGAACAGAGCCAGGCCAGCATCCAAGG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354547.7
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCCCCCTTCTCACCCTTaGTTCCTGGGATCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAPPSHP*FLGSLA
Trigger: AGCCAGGGATCCCAGGAACCAAGGGTGAGAAGGGGG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACCCCCCTTCTCACCCTTaGTTCCTGGGATCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYPPSHP*FLGSLA
Trigger: AGCCAGGGATCCCAGGAACCAAGGGTGAGAAGGGGG...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACAGGAACCTCTGCTCCTaGATTGCCCTTCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYRNLCS*IALLPG
Trigger: GCCGGGGAGAAGGGCAATCCAGGAGCAGAGGTTCCT...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACAGGAACCTCTGCTCCTaGATTGCCCTTCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHRNLCS*IALLPG
Trigger: GCCGGGGAGAAGGGCAATCCAGGAGCAGAGGTTCCT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGGAACCTCTGCTCCTaGATTGCCCTTCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELARNLCS*IALLPG
Trigger: GCCGGGGAGAAGGGCAATCCAGGAGCAGAGGTTCCT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATAATCCAGGCGCTCCTTaGTCTCCCTTATCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDNPGAP*SPLSPL
Trigger: TAAAGGGGATAAGGGAGACCAAGGAGCGCCTGGATT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR TCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTCCCGGCGCCTCCTTaGGTGGAGCTTCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLPAPP*VELPFL
Trigger: GAGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHWSQSH*IEERQQ
Trigger: CTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGACGTCCGCCTTTTTATaGCCGGGGGTGGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMTSAFL*PGVEPV
Trigger: GACTGGCTCCACCCCCGGTCATAAAAAGGCGGACGT...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCTGCAGAGCAGTTGGTaGCGCGCTGTCAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELALQSSW*RAVSPS
Trigger: AGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTTCCCTTCAAGTGTCTaGAGAGCAGTTGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTFPSSV*RAVGAA
Trigger: CGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGGCTCTATCCAAACTaGGGGGCAGGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMRLYPN*GAGGKG
Trigger: GCCCTTTCCCCCTGCCCCGCAGTTTGGATAGAGCCT...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTGGTGGACCTTGGATaGTGGCCTGGCTCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLVDLG*WPGSVR
Trigger: GCGAACAGAGCCAGGCCAGCATCCAAGGTCCACCAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGGCCAGGTTCCCCTCTaGCTCCTCCAATGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMGQVPL*LLQWSC
Trigger: GCAACTCCATTGGAGGAGGCAGAGGGGAACCTGGCC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTGGCCATCGACACCTaGTTCTCCCTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLAIDT*FSLWPW
Trigger: CCAGGGCCAAAGGGAGAAGCAGGTGTCGATGGCCAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGCAGAGCTGCTGGCATaGTGCTTAGGCACTCCCGGT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMAELLA*CLGTPG
Trigger: ACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTCTGC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCAGCCCAGGAACCTCTaGTCCTGGATTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAQPRNL*SWIALL
Trigger: GAGAAGGGCAATCCAGGAGCAGAGGTTCCTGGGCTG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCAGCCCAGGAACCTCTaGTCCTGGATTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHQPRNL*SWIALL
Trigger: GAGAAGGGCAATCCAGGAGCAGAGGTTCCTGGGCTG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTGTCTGCAGAGCAGTTaGTGCCGCGCTGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHCLQSS*CRAVSP
Trigger: AGGACTGACAGCGCGGCACCAACTGCTCTGCAGACA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCGGCGCCTCCTTGAGTaGAGCTTCCATTTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHRRLLE*SFHFSS
Trigger: GGACGAGAAATGGAAGCTCCACTCAAGGAGGCGCCG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCTTGGATGCTGGCCTaGCTCTGTTCGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPWMLA*LCSPWN
Trigger: GTTCCAGGGCGAACAGAGCCAGGCCAGCATCCAAGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGTGGACCTTGGATGCTaGCCTGGCTCTGTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMVDLGC*PGSVRP
Trigger: AGGGCGAACAGAGCCAGGCCAGCATCCAAGGTCCAC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGTCTCCCTTGGTTCCTaGGATCCCTGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYVSLGS*DPWLTL
Trigger: AAGGGTGAGCCAGGGATCCCAGGAACCAAGGGAGAC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645393.2
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCTCTGCCTCCTCCAATaGAGTTGCCAGCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTLCLLQ*SCQHRL
Trigger: AAGGCGATGCTGGCAACTCCATTGGAGGAGGCAGAG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCCTGGAGCTCCAGGTaGGCCAATTTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPWSSR*ANLPRK
Trigger: CTTCCTGGGCAAATTGGCCCACCTGGAGCTCCAGGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTGGCCTGGAATCCCTaGAGCTCCAGGTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLAWNP*SSRWAN
Trigger: ATTGGCCCACCTGGAGCTCCAGGGATTCCAGGCCAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACCCAATCTCCCCCTTCTaGCCTGGAATCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYPISPF*PGIPGA
Trigger: AGCTCCAGGGATTCCAGGCCAGAAGGGGGAGATTGG...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACAACTCCAATTGGTCCTaGAGTACCCGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHNSNWS*STRWPR
Trigger: CCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMALWSR*AWNSNW
Trigger: CCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR TCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMWSQSH*IEERQQ
Trigger: CTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCTGGAGAGCCTCATTaGTGTTTCCATTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPGEPH*CFHCNP
Trigger: TGGATTACAATGGAAACATCAATGAGGCTCTCCAGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTTCCCTTCAAGTGTCTaGAGAGCAGTTGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHFPSSV*RAVGAA
Trigger: CGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGAGAGCACCTCCCCATaGCTCAGAGCCAGATTTGTG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAESTSP*LRARFV
Trigger: CACAAATCTGGCTCTGAGGCATGGGGAGGTGCTCTC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACACCAGGAGGTCCTGGTaGGCAGTTACATCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHTRRSW*AVTSWR
Trigger: TCTCCAGGATGTAACTGCCCACCAGGACCTCCTGGT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACACCAGGAGGTCCTGGTaGGCAGTTACATCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYTRRSW*AVTSWR
Trigger: TCTCCAGGATGTAACTGCCCACCAGGACCTCCTGGT...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCCTTCTCGCCTGGTTaGCCCTTTACTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPFSPG*PFTPGS
Trigger: ACTCCCAGGAGTAAAGGGCCAACCAGGCGAGAAGGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGTCTCCCTTGGTTCCTaGGATCCCTGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMVSLGS*DPWLTL
Trigger: AAGGGTGAGCCAGGGATCCCAGGAACCAAGGGAGAC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTTCCCTTCTGCTCCTaGGTCTCCCTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLPFCS*VSLGSW
Trigger: CCAGGAACCAAGGGAGACCCAGGAGCAGAAGGGAAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACCTCTGCCTCCTCCAATaGAGTTGCCAGCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYLCLLQ*SCQHRL
Trigger: AAGGCGATGCTGGCAACTCCATTGGAGGAGGCAGAG...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCTCTGCCTCCTCCAATaGAGTTGCCAGCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELALCLLQ*SCQHRL
Trigger: AAGGCGATGCTGGCAACTCCATTGGAGGAGGCAGAG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTTCCCCATCGTGTCCTaGAGGGCCTGGCAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMFPIVS*RAWQSN
Trigger: ATTGGACTGCCAGGCCCTCCAGGACACGATGGGGAA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGGGCCCATGTCTCCTaGTTTACCGCGAGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMRAHVS*FTARSL
Trigger: AAGGGACCTCGCGGTAAACCAGGAGACATGGGCCCT...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAACTCCAATTGGTCCTaGAGTACCCGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMNSNWS*STRWPR
Trigger: CCTGGGCCACCGGGTACTCCAGGACCAATTGGAGTT...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTCACCCTTGGTTCCTaGGATCCCTGGCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLTLGS*DPWLTL
Trigger: AAGGGTGAGCCAGGGATCCCAGGAACCAAGGGTGAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR TCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACAAAGTTAGGGGAATCTaGCCGGCTCTCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYKVRGI*PALLLS
Trigger: GGAGAGAAGGAGAGCCGGTCAGATTCCCCTAACTTT...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTTCCCTTCAAGTGTCTaGAGAGCAGTTGGTGCCGCG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMFPSSV*RAVGAA
Trigger: CGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCAAAGGCGACAGCCGCTaGCAAAAGGCTCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTKGDSR*QKALSK
Trigger: TTTGGATAGAGCCTTTTGGCAGCGGCTGTCGCCTTT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCTCCTCCAATGGAGTTaGCAGCATCGCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHLLQWS*QHRLSL
Trigger: GAGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTGGGCAGTTACATCCTaGAGATGTCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAWAVTS*RCLWGL
Trigger: GAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTGGGCAGTTACATCCTaGAGATGTCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHWAVTS*RCLWGL
Trigger: GAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTGGCTCTGTTCGCCCTaGAACGTCCGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHWLCSP*NVRLFM
Trigger: CATAAAAAGGCGGACGTTCCAGGGCGAACAGAGCCA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTCTGCCTCCTCCAATaGAGTTGCCAGCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLCLLQ*SCQHRL
Trigger: AAGGCGATGCTGGCAACTCCATTGGAGGAGGCAGAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACTTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACCTGGCTGGCCCCCTTTaGCACCAGGACACAATAATT +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYLAGPL*HQDTII
Trigger: AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAG...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTTCAGGGCAATTATTTaGCTGGAGCGCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTFRAII*LERRAA
Trigger: AGCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAAAGGCGACAGCCGCTaGCAAAAGGCTCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAKGDSR*QKALSK
Trigger: TTTGGATAGAGCCTTTTGGCAGCGGCTGTCGCCTTT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCTCCTCCAATGGAGTTaGCAGCATCGCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLLQWS*QHRLSL
Trigger: GAGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAAGGGCTTGTATCGCTaGAAAACGTCCCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAKGLYR*KTSLSA
Trigger: AGCGGAAAGGGACGTTTTCCAGCGATACAAGCCCTT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACAGCGTCCGGATCTCCTaGAGAGCCTCATTGATGTTT +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYSVRIS*RASLMF
Trigger: AAACATCAATGAGGCTCTCCAGGAGATCCGGACGCT...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTTCTCCCTTCACTCCTaGAGGTCCATCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMFSLHS*RSILSW
Trigger: CCAGGAAAGGATGGACCTCCAGGAGTGAAGGGAGAA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAATCCAGGCGCTCCTTaGTCTCCCTTATCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELANPGAP*SPLSPL
Trigger: TAAAGGGGATAAGGGAGACCAAGGAGCGCCTGGATT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR TCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTTCTCGTCCAGCAGTTaGTTGACTCGTCCCAAAATA +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTFSSSS*LTRPKI
Trigger: TATTTTGGGACGAGTCAATCAACTGCTGGACGAGAA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCCTGGAGAGCCTCATTaGTGTTTCCATTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: KYHGPLHLCEFTHELASTPGEPH*CFHCNP
Trigger: TGGATTACAATGGAAACATCAATGAGGCTCTCCAGG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTTGTTCCAGCAGCCTTaGACTGGTAAGCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMLFQQP*TGKPSS
Trigger: CGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTTCAGGGCAATTATTTaGCTGGAGCGCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMFRAII*LERRAA
Trigger: AGCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR TCA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTTCTCGTCCAGCAGTTaGTTGACTCGTCCCAAAATA +
Preference number: 4 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHFSSSS*LTRPKI
Trigger: TATTTTGGGACGAGTCAATCAACTGCTGGACGAGAA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR TCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCTGGAGAGCCTCATTaGTGTTTCCATTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPGEPH*CFHCNP
Trigger: TGGATTACAATGGAAACATCAATGAGGCTCTCCAGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 4 (lower is better)
Translates to: LSKYHGPLHLCEFTHELACAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR GCA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACTGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 4 (lower is better)
Translates to: GFKILLDTPSLANIMDLYCAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR GCA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGTGTGCACAAATATCATaGAGACATTACGACCAAACA +
Preference number: 4 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMCAQIS*RHYDQT
Trigger: TGTTTGGTCGTAATGTCTGCATGATATTTGTGCACA...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS CCA 90 bp GAGTGCCAGCGAGCAGAGGGCCAGCGTCAGCAGCCCGCACGACCCTaGACTCGGCAGCCGTGCGCCGCGCTCCGCCCGCGCCGCCACCAG +
Preference number: 5 (lower is better)
Translates to: ECQRAEGQRQQPARP*TRQPCAALRPRRHQ
Trigger: CTGGTGGCGGCGCGGGCGGAGCGCGGCGCACGGCTGCCGAGTCCAGGGTCGTGCGGGCTGCTGACGCTGGCCCTCTGCTCGCTGGCACTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS TCA 90 bp GCACCCGGGCCTGCAGCTCGGCCGTCCGAAAGTGGGCGAGCAGGCTaGGTGCCAGCGAGCAGAGGGCCAGCGTCAGCAGCCCGCACGACC +
Preference number: 5 (lower is better)
Translates to: APGPAARPSESGRAG*VPASRGPASAARTT
Trigger: GGTCGTGCGGGCTGCTGACGCTGGCCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGAGCTGCAGGCCCGGGTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS GCA 90 bp CCGGGCCTGCAGCTCGGCCGTCCGAAAGTGGGCGAGCAGGCTGAGTaGCAGCGAGCAGAGGGCCAGCGTCAGCAGCCCGCACGACCCTGG +
Preference number: 5 (lower is better)
Translates to: PGLQLGRPKVGEQAE*QRAEGQRQQPARPW
Trigger: CCAGGGTCGTGCGGGCTGCTGACGCTGGCCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGAGCTGCAGGCCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS CCA 90 bp GCTTCCAGGCGCAGCACCCGGGCCTGCAGCTCGGCCGTCCGAAAGTaGGCGAGCAGGCTGAGTGCCAGCGAGCAGAGGGCCAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: ASRRSTRACSSAVRK*ASRLSASEQRASVS
Trigger: GCTGACGCTGGCCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGAGCTGCAGGCCCGGGTGCTGCGCCTGGAAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS TCA 90 bp CGGCTGGCGAGGAGCGCAGGGGCCGATTCCGGCGCCTCTGTAACTTaGCACACTCCCTGCGGCGGCACGGATCGGATGAGCAATCCGTGC +
Preference number: 5 (lower is better)
Translates to: RLARSAGADSGASVT*HTPCGGTDRMSNPC
Trigger: GCACGGATTGCTCATCCGATCCGTGCCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCCGGAATCGGCCCCTGCGCTCCTCGCCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS CCA 90 bp AGTACCCTCCAGGGCTGGGCACCCAGGCTGGACTCAGCATTCCTGTaGAATCAGGAGCGGTGCTGCTGGAGTGGCCTCCCACCCCACACC +
Preference number: 5 (lower is better)
Translates to: STLQGWAPRLDSAFL*NQERCCWSGLPPHT
Trigger: GGTGTGGGGTGGGAGGCCACTCCAGCAGCACCGCTCCTGATTCCACAGGAATGCTGAGTCCAGCCTGGGTGCCCAGCCCTGGAGGGTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683633.1
CDS CCA 90 bp AGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTaGAACTCCAATTGGTCCTGGAGTACCCTCCAGGGCTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: RVSFAAPLALWSRWA*NSNWSWSTLQGWAP
Trigger: GGGTGCCCAGCCCTGGAGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683633.1
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACCGGTGGCTGCCGCTTaGTGGGTGCGCTCCGCTACC +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTPVAAA*WVRSAT
Trigger: GGTAGCGGAGCGCACCCACAAAGCGGCAGCCACCGG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp CAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACTCAATAGCCGTCTCCATTaGCTGCTCCCCGCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: QGLLCCPSRPLVPLGLELNSRLH*LLPALR
Trigger: GCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTATT...GAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp CCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCTGGGTGGCCCGGTTaGCCGTCCAGCCCAATGGGA +
Preference number: 5 (lower is better)
Translates to: PRFPLSPGGPCKPGSPAAPGWPG*PSSPMG
Trigger: TCCCATTGGGCTGGACGGCAAACCGGGCCACCCAGG...AGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGCTCCACGCTCCCCCTaGTCTCCTGGCTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDAPRSP*SPGCPG
Trigger: CCCAGGGCAGCCAGGAGACAAGGGGGAGCGTGGAGC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGCTCCACGCTCCCCCTaGTCTCCTGGCTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTAPRSP*SPGCPG
Trigger: CCCAGGGCAGCCAGGAGACAAGGGGGAGCGTGGAGC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS CCA 90 bp CTTCAAGTGTCTGCAGAGCAGTTGGTGCCGCGCTGTCAGTCCTTCTaGGCGCCTCGTGTCTCCCGGGCCAGTCAGTTTCAGTCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: LQVSAEQLVPRCQSF*APRVSRASQFQSPG
Trigger: GCCCGGGGACTGAAACTGACTGGCCCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAGACACTTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000645393.2
ENST00000673830.1
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACCGGTGGCTGCCGCTTaGTGGGTGCGCTCCGCTACC +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIPVAAA*WVRSAT
Trigger: GGTAGCGGAGCGCACCCACAAAGCGGCAGCCACCGG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCCGGTGGCTGCCGCTTaGTGGGTGCGCTCCGCTACC +
Preference number: 5 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLPVAAA*WVRSAT
Trigger: GGTAGCGGAGCGCACCCACAAAGCGGCAGCCACCGG...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACATTCCGGGCGCCCCCTaGGCTCCATGCTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDIPGAP*APCLPG
Trigger: GCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAAT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 5 (lower is better)
Translates to: PRVSFAAPLALWSRWAWNVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...GTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTCPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAAATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CAA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAACCTCTGCTCCTGGATaGCCCTTCTCCCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGTSAPG*PFSPAS
Trigger: AGAAGCCGGGGAGAAGGGCAATCCAGGAGCAGAGGT...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTGGGTTCAGGGGCTGTaGGGGAGAGAGCACCTCCCC +
Preference number: 5 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPWVQGL*GREHLP
Trigger: GGGGAGGTGCTCTCTCCCCAACAGCCCCTGAACCCA...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CAA 90 bp TCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGAAGGCCTGGAACTCCAATaGGTCCTGGAGTACCCTGGG +
Preference number: 5 (lower is better)
Translates to: SQGLLCCPSRPLVPLGLEGLELQ*VLEYPG
Trigger: CCCAGGGTACTCCAGGACCAATTGGAGTTCCAGGCC...TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS GCA 90 bp TCTCTCCGCCCAGTCTTTCCCTTCAAGTGTCTGCAGAGCAGTTGGTaGCGCGCTGTCAGTCCTTCTGGGCGCCTCGTGTCTCCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: SLRPVFPFKCLQSSW*RAVSPSGRLVSPGP
Trigger: TGGCCCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAAAGACTGGGCGGAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000645393.2
ENST00000673830.1
CDS CCA 90 bp CAGGGCTCTCCTCAGGTGCCTCGTCTTCCCAGGGGTAGAATTCCCTaGAGCATGGCCAGGGGAGTGACTCCTGTGCCAGGCCACGACAGA +
Preference number: 5 (lower is better)
Translates to: QGSPQVPRLPRGRIP*SMARGVTPVPGHDR
Trigger: TCTGTCGTGGCCTGGCACAGGAGTCACTCCCCTGGCCATGCTCCAGGGAATTCTACCCCTGGGAAGACGAGGCACCTGAGGAGAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACATCCTGGAGATGTCTTaGGGGCCTCCCGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDILEMS*GPPGAS
Trigger: GGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGAT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGCCCTTGGCTCCATGCTaGCCTGGCATCCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPPLAPC*PGIPGM
Trigger: CATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGGG...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCCGGGCGCCCCCTaGGCTCCATGCTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIIPGAP*APCLPG
Trigger: GCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAAT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp GTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTATTCCGGGCGCCCCCTaGGCTCCATGCTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VNQEAQLLPLVLSSQGLLIPGAP*APCLPG
Trigger: GCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAAT...AAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGCTCCTGGGTCTCCCTaGGTTCCTGGGATCCCTGGC +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTAPGSP*VPGIPG
Trigger: GCCAGGGATCCCAGGAACCAAGGGAGACCCAGGAGC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CAA 90 bp TCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCTCTCCCTTGGAGCCCTaGGGGCCATCTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: SPGGPCKPGSPAAPVGPVSPLEP*GPSGPC
Trigger: ACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAGA...GACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCATGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGACPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGCCCCCTTCTCACCCTaGGTTCCTGGGATCCCTGGC +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDAPFSP*VPGIPG
Trigger: GCCAGGGATCCCAGGAACCAAGGGTGAGAAGGGGGC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CAA 90 bp AAACCTCGGTGTCCCCGGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGATGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: KPRCPRFPLSPGGPCKPGWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...TCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACCGGGGACACCGAGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CAA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCCCCCTTCTCGCCTGGTaGGCCCTTTACTCCCACACG +
Preference number: 5 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCPLLAW*ALYSHT
Trigger: CGTGTGGGAGTAAAGGGCCAACCAGGCGAGAAGGGG...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS GCA 90 bp CCTTCCGTGCCACGAAGAAACAGTCTCTGCTGTGGCCCTATGGAGTaGCGGCTGCTCACGGGTAAGCCACTCAGCACAAGGCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PSVPRRNSLCCGPME*RLLTGKPLSTRRPQ
Trigger: CTGAGGCCGCCTTGTGCTGAGTGGCTTACCCGTGAGCAGCCGGCACTCCATAGGGCCACAGCAGAGACTGTTTCTTCGTGGCACGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp ATCTCATGGATGTGGCCTTTGGTACAGGGAGACAGGGCAGACTGGTaGCAGCCTCAGGCCAGGGTGCTCTCCATACCCGATTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: ISWMWPLVQGDRADW*QPQARVLSIPDSGP
Trigger: GGGGCCGGAATCGGGTATGGAGAGCACCCTGGCCTGAGGCTGGCACCAGTCTGCCCTGTCTCCCTGTACCAAAGGCCACATCCATGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 90 bp GCTGGACTCAGCATTCCTGTGGAATCAGGAGCGGTGCTGCTGGAGTaGCCTCCCACCCCACACCTGGCAGGTTTGAGGTCCCTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: AGLSIPVESGAVLLE*PPTPHLAGLRSLGV
Trigger: TACACCCAGGGACCTCAAACCTGCCAGGTGTGGGGTGGGAGGCCACTCCAGCAGCACCGCTCCTGATTCCACAGGAATGCTGAGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683633.1
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACGGCGCCTCTGTAACTaGACACACTCCCTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIRRLCN*THSLRR
Trigger: CCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCCG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGTGTCTGCAGAGCAGTaGGTGCCGCGCTGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDVSAEQ*VPRCQS
Trigger: GGACTGACAGCGCGGCACCAACTGCTCTGCAGACAC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACAATAGCCGTCTCCATTaGCTGCTCCCCGCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDNSRLH*LLPALR
Trigger: GCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTATT...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCTGGAGATGTCTTaGGGGCCTCCCGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIILEMS*GPPGAS
Trigger: GGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGAT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGACCCATGTCGCCCTTaGGTCCTGGGTGGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIDPCRP*VLGGPV
Trigger: AACCGGGCCACCCAGGACCAAAGGGCGACATGGGTC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGCTCCACGCTCCCCCTaGTCTCCTGGCTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIAPRSP*SPGCPG
Trigger: CCCAGGGCAGCCAGGAGACAAGGGGGAGCGTGGAGC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGCTCCACGCTCCCCCTaGTCTCCTGGCTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRAPRSP*SPGCPG
Trigger: CCCAGGGCAGCCAGGAGACAAGGGGGAGCGTGGAGC...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTCTCCCTTGGAGCCCTaGGGGCCATCTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDSPLEP*GPSGPC
Trigger: ACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAGA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGTGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGCPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTGTCCCCGGTTTCCCTaGTCCCCGGGTGGTCCATGT +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDCPRFP*SPGGPC
Trigger: ACATGGACCACCCGGGGACAAGGGAAACCGGGGACA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000673681.1
ENST00000673977.1
CDS-3UTR CAA 90 bp ATCCCAGGGTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTGGGCCTGGACTTCAGGGCAATTATTaGGCTGGAGCGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: IPGSPLLPLSPFGPAGPGLQGNY*AGAQSC
Trigger: GCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAAG...TCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp CATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCGCCCCCTTCTCACCCTaGGTTCCTGGGATCCCTGGC +
Preference number: 5 (lower is better)
Translates to: HVNQEAQLLPLVLSSQGLAPFSP*VPGIPG
Trigger: GCCAGGGATCCCAGGAACCAAGGGTGAGAAGGGGGC...GAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR CAA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTTGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS GCA 90 bp ATTGCAGGGGGAGGAGGTGCATTCCACAGTTTCAGGGTGACCCTGTaGCCCTTCCCCAGCCTGCCACGGTGCGGTATGACACACGTCACA +
Preference number: 5 (lower is better)
Translates to: IAGGGGAFHSFRVTL*PFPSLPRCGMTHVT
Trigger: TGTGACGTGTGTCATACCGCACCGTGGCAGGCTGGGGAAGGGGCACAGGGTCACCCTGAAACTGTGGAATGCACCTCCTCCCCCTGCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp GATGTCCTTCCGTGCCACGAAGAAACAGTCTCTGCTGTGGCCCTATaGAGTGCCGGCTGCTCACGGGTAAGCCACTCAGCACAAGGCGGC +
Preference number: 5 (lower is better)
Translates to: DVLPCHEETVSAVAL*SAGCSRVSHSAQGG
Trigger: GCCGCCTTGTGCTGAGTGGCTTACCCGTGAGCAGCCGGCACTCCATAGGGCCACAGCAGAGACTGTTTCTTCGTGGCACGGAAGGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp CTCCATACCCGATTCCGGCCCCCTGACCGGCTGCAGCATCTTACCTaGGTCACTCCACATCTGAGGGCCCATGGTACACATACCCGGTAC +
Preference number: 5 (lower is better)
Translates to: LHTRFRPPDRLQHLT*VTPHLRAHGTHTRY
Trigger: GTACCGGGTATGTGTACCATGGGCCCTCAGATGTGGAGTGACCCAGGTAAGATGCTGCAGCCGGTCAGGGGGCCGGAATCGGGTATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACCTCCCGGCGCCTCCTaGAGTGGAGCTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTPPGAS*SGASIS
Trigger: AGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAGG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCTCCCGGCGCCTCCTaGAGTGGAGCTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDPPGAS*SGASIS
Trigger: AGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATATCCTGGAGATGTCTTaGGGGCCTCCCGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNILEMS*GPPGAS
Trigger: GGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGAT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp CCAATTGGTCCTGGAGTACCGGGTAGTCCCAGGGGACCACGGTCTCCTTTTTCTATCCTGGAGATGTCTTaGGGGCCTCCCGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PIGPGVPGSPRGPRSPFSILEMS*GPPGAS
Trigger: GGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGAT...AGAAAAAGGAGACCGTGGTCCCCTGGGACTACCCGGTACTCCAGGACCAATTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACCCCTTCTCGCCTGGTaGGCCCTTTACTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIPLLAW*ALYSWE
Trigger: CTCCCAGGAGTAAAGGGCCAACCAGGCGAGAAGGGG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATCTCCCTTGGAGCCCTaGGGGCCATCTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTISPLEP*GPSGPC
Trigger: ACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAGA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIICPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATGTCCCCGGTTTCCCTaGTCCCCGGGTGGTCCATGT +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTICPRFP*SPGGPC
Trigger: ACATGGACCACCCGGGGACAAGGGAAACCGGGGACA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000673681.1
ENST00000673977.1
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATCCCAATGGCACCTTaGTCCCCTGGGAGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTIPMAP*SPGSPG
Trigger: ACCCGGACTCCCAGGGGACAAAGGTGCCATTGGGAT...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCGCCCCGGTTTCCCTaGTCCCCGGGTGGTCCATGT +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNSPRFP*SPGGPC
Trigger: ACATGGACCACCCGGGGACAAGGGAAACCGGGGCGA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673768.1
CDS-3UTR CAA 90 bp CAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCGGCCTGGAACTCCAATaGGTCCTGGAGTACCGGGTA +
Preference number: 5 (lower is better)
Translates to: QEAQLLPLVLSSQGLLCCGLELQ*VLEYRV
Trigger: TACCCGGTACTCCAGGACCAATTGGAGTTCCAGGCC...GCAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS GCA 90 bp TGCCACGAAGAAACAGTCTCTGCTGTGGCCCTATGGAGTGCCGGCTaGTCACGGGTAAGCCACTCAGCACAAGGCGGCCTCAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: CHEETVSAVALWSAG*SRVSHSAQGGLSFL
Trigger: GAGGAAACTGAGGCCGCCTTGTGCTGAGTGGCTTACCCGTGAGCAGCCGGCACTCCATAGGGCCACAGCAGAGACTGTTTCTTCGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp GAGGATCAGCGTGGAGGCCTAGACTGTCCATGCCTAGAGAGGGACTaGGCAGGCGGGAATAAACTGCTACCACTTCGCCTGGGACGTGCT +
Preference number: 5 (lower is better)
Translates to: EDQRGGLDCPCLERD*AGGNKLLPLRLGRA
Trigger: AGCACGTCCCAGGCGAAGTGGTAGCAGTTTATTCCCGCCTGCCCAGTCCCTCTCTAGGCATGGACAGTCTAGGCCTCCACGCTGATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp AGAACAAAGCTTTGCCAAGCTAGACAAGCCTGGAGTCCTTGGACCTaGCCGGGCAAGGTGGAGGGAGGGGGCGTGGAGAATCACAGGAGG +
Preference number: 5 (lower is better)
Translates to: RTKLCQARQAWSPWT*PGKVEGGGVENHRR
Trigger: CCTCCTGTGATTCTCCACGCCCCCTCCCTCCACCTTGCCCGGCCAGGTCCAAGGACTCCAGGCTTGTCTAGCTTGGCAAAGCTTTGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484990.1
CDS CCA 90 bp GGGAGTGACTCCTGTGCCAGGCCACGACAGAGGGCACCCCTACACTaGGCAGACAGGAGGTCCCTATTGTTTCCTGGACCTGTGGACTTT +
Preference number: 5 (lower is better)
Translates to: GSDSCARPRQRAPLH*ADRRSLLFPGPVDF
Trigger: AAAGTCCACAGGTCCAGGAAACAATAGGGACCTCCTGTCTGCCCAGTGTAGGGGTGCCCTCTGTCGTGGCCTGGCACAGGAGTCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGCAGGGGGAAAGGGCTaGTATCGCTGGAAAACGTCC +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDAGGKG*YRWKTS
Trigger: GGACGTTTTCCAGCGATACAAGCCCTTTCCCCCTGC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGCCTCCCGGCGCCTCCTaGAGTGGAGCTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQPPGAS*SGASIS
Trigger: AGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAGG...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGACCCATGTCGCCCTTaGGTCCTGGGTGGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRDPCRP*VLGGPV
Trigger: AACCGGGCCACCCAGGACCAAAGGGCGACATGGGTC...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCCTTGGCTCCATGCTaGCCTGGCATCCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNPLAPC*PGIPGM
Trigger: CATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGGG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGGTCTCCTTTGCTGCCTCCTCCAATGGAGTaGCCAGCATCGCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PGSPAAPVGPVIPGSPLLPPPME*PASPFS
Trigger: AGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAGG...CAGCAAAGGAGACCCTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGGCCTGGAACTCCAATaGGTCCTGGAGTACCCGGTG +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIGLELQ*VLEYPV
Trigger: CACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000673977.1
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp CACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGTGTCCCCGGTTTCCCTaGTCCCCGGGTGGTCCATGT +
Preference number: 5 (lower is better)
Translates to: HLFQQPWTGKPSSPNGHGCPRFP*SPGGPC
Trigger: ACATGGACCACCCGGGGACAAGGGAAACCGGGGACA...CCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CAA 90 bp TTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGGGCAATCCCAATGGCACCTTaGTCCCCTGGGAGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: LFQQPWTGKPSSPNGQGAIPMAP*SPGSPG
Trigger: ACCCGGACTCCCAGGGGACAAAGGTGCCATTGGGAT...TGCCCCCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp ACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGGCTTCACAACCAAGCTaGCCAAGGCGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TCSSSLGLVSHLRPMGMGASQPS*PRRWPR
Trigger: CCTGGGCCACCGCCTTGGCAAGCTTGGTTGTGAAGC...CCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGTCCAGGAACACCTaGGAGCCCCTCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNWSRNT*EPLCSW
Trigger: CCAGGAGCAGAGGGGCTCCAAGGTGTTCCTGGACCA...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673768.1
CDS TCA 90 bp AGATGGACATGGGGCTTCAGGAGACCCGGAGCAAGTGCTCAGTCCTaGGGGAGCTTGTGGAATGAGAGTCCTCTGCTGCCCTGGTCTGAC +
Preference number: 5 (lower is better)
Translates to: RWTWGFRRPGASAQS*GSLWNESPLLPWSD
Trigger: GTCAGACCAGGGCAGCAGAGGACTCTCATTCCACAAGCTCCCTCAGGACTGAGCACTTGCTCCGGGTCTCCTGAAGCCCCATGTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp GTCTGCAAGCGCAGGGTTTGGCAGGACCAGCAGGGACAGGAAGCATaGTACCCGCCTGCTTGCTCTGCACTCTCCTTTTGTTGCCTATGC +
Preference number: 5 (lower is better)
Translates to: VCKRRVWQDQQGQEA*YPPACSALSFCCLC
Trigger: GCATAGGCAACAAAAGGAGAGTGCAGAGCAAGCAGGCGGGTAGCATGCTTCCTGTCCCTGCTGGTCCTGCCAAACCCTGCGCTTGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp ACCAGCAAGCAGAGATGTCCTTCCGTGCCACGAAGAAACAGTCTCTaGTGTGGCCCTATGGAGTGCCGGCTGCTCACGGGTAAGCCACTC +
Preference number: 5 (lower is better)
Translates to: TSKQRCPSVPRRNSL*CGPMECRLLTGKPL
Trigger: GAGTGGCTTACCCGTGAGCAGCCGGCACTCCATAGGGCCACAGCAGAGACTGTTTCTTCGTGGCACGGAAGGACATCTCTGCTTGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp CACCTCCCCATGCCTCAGAGCCAGATTTGTGGACTGAAACCCTTTTaGTTCACAACCAAGCTTGCCAAGGCGGTGGCCCAGGCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: HLPMPQSQICGLKPF*FTTKLAKAVAQACR
Trigger: ACGGCAGGCCTGGGCCACCGCCTTGGCAAGCTTGGTTGTGAAGCAAAAGGGTTTCAGTCCACAAATCTGGCTCTGAGGCATGGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS GCA 90 bp CTGTCTCTGATGAACACACACATCCTTTCATCCACAGGCAGCCACTaGTGGGTCCTTCTGAGCTGCTCACCCCGCCTCGGCTTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LSLMNTHILSSTGSH*WVLLSCSPRLGFRA
Trigger: AGCCCTGAAGCCGAGGCGGGGTGAGCAGCTCAGAAGGACCCAGCAGTGGCTGCCTGTGGATGAAAGGATGTGTGTGTTCATCAGAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 90 bp CTCCCCGGCTTCTCCTTTCTCTCCTGTAAACCTCAGGAGCCCAGCTaGATTAGGCAATCCTGCCACTCTGGGTCTGCTCTGGCCACCATG +
Preference number: 5 (lower is better)
Translates to: LPGFSFLSCKPQEPS*IRQSCHSGSALATM
Trigger: CATGGTGGCCAGAGCAGACCCAGAGTGGCAGGATTGCCTAATCCAGCTGGGCTCCTGAGGTTTACAGGAGAGAAAGGAGAAGCCGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS CCA 90 bp ACACCAAGAACAAAGCTTTGCCAAGCTAGACAAGCCTGGAGTCCTTaGACCTGGCCGGGCAAGGTGGAGGGAGGGGGCGTGGAGAATCAC +
Preference number: 5 (lower is better)
Translates to: TPRTKLCQARQAWSP*TWPGKVEGGGVENH
Trigger: GTGATTCTCCACGCCCCCTCCCTCCACCTTGCCCGGCCAGGTCCAAGGACTCCAGGCTTGTCTAGCTTGGCAAAGCTTTGTTCTTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484990.1
CDS CCA 90 bp TCTCTGATGAACACACACATCCTTTCATCCACAGGCAGCCACTGCTaGGTCCTTCTGAGCTGCTCACCCCGCCTCGGCTTCAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SLMNTHILSSTGSHC*VLLSCSPRLGFRAL
Trigger: GAGAGCCCTGAAGCCGAGGCGGGGTGAGCAGCTCAGAAGGACCCAGCAGTGGCTGCCTGTGGATGAAAGGATGTGTGTGTTCATCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 90 bp AAGAGGGAGGAACGTAAGGGTCTGGAATCTCATGGATGTGGCCTTTaGTACAGGGAGACAGGGCAGACTGGTGCCAGCCTCAGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: KREERKGLESHGCGL*YRETGQTGASLRPG
Trigger: CCCTGGCCTGAGGCTGGCACCAGTCTGCCCTGTCTCCCTGTACCAAAGGCCACATCCATGAGATTCCAGACCCTTACGTTCCTCCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGTGTCTGCAGAGCAGTaGGTGCCGCGCTGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIVSAEQ*VPRCQS
Trigger: GGACTGACAGCGCGGCACCAACTGCTCTGCAGACAC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTAATAGCCGTCTCCATTaGCTGCTCCCCGCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIINSRLH*LLPALR
Trigger: GCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTATT...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCCTCCCGGCGCCTCCTaGAGTGGAGCTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNPPGAS*SGASIS
Trigger: AGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAGG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACCCTCCTCCAATGGAGTaGCCAGCATCGCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDPPPME*PASPFS
Trigger: AGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAGG...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTCTCCCTTGGAGCCCTaGGGGCCATCTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIISPLEP*GPSGPC
Trigger: ACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAGA...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CAA 90 bp AGTTTTCAGAGTTGGCGAGGCCAGGCTCGTTCAGGGCAGTCATTCGACTGGGCCGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 5 (lower is better)
Translates to: SFQSWRGQARSGQSFDWAVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...GGCCCAGTCGAATGACTGCCCTGAACGAGCCTGGCCTCGCCAACTCTGAAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATGGCCTGGAACTCCAATaGGTCCTGGAGTACCCGGTG +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNGLELQ*VLEYPV
Trigger: CACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCC...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000673977.1
CDS-3UTR CAA 90 bp ACACATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 5 (lower is better)
Translates to: THELASTSVLAGPLWHQDSGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...GTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATATCCCAATGGCACCTTaGTCCCCTGGGAGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNIPMAP*SPGSPG
Trigger: ACCCGGACTCCCAGGGGACAAAGGTGCCATTGGGAT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACACTTCAGGGCAATTATTaGGCTGGAGCGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTLQGNY*AGAQSC
Trigger: GCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAAG...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATACCTCTGCTCCTGGATaGCCCTTCTCCCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNTSAPG*PFSPAS
Trigger: AGAAGCCGGGGAGAAGGGCAATCCAGGAGCAGAGGT...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCCCCTTCTCGCCTGGTaGGCCCTTTACTCCCACACG +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIPLLAW*ALYSHT
Trigger: CGTGTGGGAGTAAAGGGCCAACCAGGCGAGAAGGGG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645393.2
CDS-3UTR CAA 90 bp TTCAGGGCAGTCATTCGACTGGGCCGTGATCCTCTTTGGGTTCAGGGGCTGTTGGCCCAGTTTTCAGAGTaGGCGAGGCCAGGCTCGTTC +
Preference number: 5 (lower is better)
Translates to: FRAVIRLGRDPLWVQGLLAQFSE*ARPGSF
Trigger: GAACGAGCCTGGCCTCGCCAACTCTGAAAACTGGGC...CAACAGCCCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS TCA 90 bp GGCCCCTCTGGCCCTGGCAGCCCAGGAACCACTCCTTATTGTCTTTaGTCCAGCGCTCTTGCAGTCACTTTTTGCAGGCCTGACCCTTGT +
Preference number: 5 (lower is better)
Translates to: GPSGPGSPGTTPYCL*SSALAVTFCRPDPC
Trigger: ACAAGGGTCAGGCCTGCAAAAAGTGACTGCAAGAGCGCTGGATCAAAGACAATAAGGAGTGGTTCCTGGGCTGCCAGGGCCAGAGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 90 bp TCACCTGGGCAGCGACCCACGATCCAACCTGGAAGAATAGGCAGGTaGCCCCTCCTCCAGCTCACTTCTAGAGCTTCTCAGTCTACTCTG +
Preference number: 5 (lower is better)
Translates to: SPGQRPTIQPGRIGR*PLLQLTSRASQSTL
Trigger: CAGAGTAGACTGAGAAGCTCTAGAAGTGAGCTGGAGGAGGGGCCACCTGCCTATTCTTCCAGGTTGGATCGTGGGTCGCTGCCCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATACCTCCTCCAATGGAGTaGCCAGCATCGCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIPPPME*PASPFS
Trigger: AGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAGG...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGCCTGGAACTCCAATaGGTCCTGGAGTACCCGGTG +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGLELQ*VLEYPV
Trigger: CACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000673977.1
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTACCTCTGCTCCTGGATaGCCCTTCTCCCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIITSAPG*PFSPAS
Trigger: AGAAGCCGGGGAGAAGGGCAATCCAGGAGCAGAGGT...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS TCA 90 bp GTCCTCTGCTGCCCTGGTCTGACGTCATCCACCCACGCCAGGGGCTaGAACCTCTCATCACCTGGCATTCAGCAGAAATTGGTCCCAATA +
Preference number: 5 (lower is better)
Translates to: VLCCPGLTSSTHARG*NLSSPGIQQKLVPI
Trigger: TATTGGGACCAATTTCTGCTGAATGCCAGGTGATGAGAGGTTTCAGCCCCTGGCGTGGGTGGATGACGTCAGACCAGGGCAGCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp CGAAAACCTAATCCTGGACCATCCCCTAGTTCTGATGGTGTCACCTaGGCAGCGACCCACGATCCAACCTGGAAGAATAGGCAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RKPNPGPSPSSDGVT*AATHDPTWKNRQVA
Trigger: GGCCACCTGCCTATTCTTCCAGGTTGGATCGTGGGTCGCTGCCCAGGTGACACCATCAGAACTAGGGGATGGTCCAGGATTAGGTTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp CTTGCTGGCATACCCTATGGGGAATCTAGAAATCTAGAGACCCAGTaGGGAAGGCGAGGCTGGGCCAAGGGCAAAGGTCTGGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LAGIPYGESRNLETQ*GRRGWAKGKGLVLS
Trigger: GCTGAGAACCAGACCTTTGCCCTTGGCCCAGCCTCGCCTTCCCCACTGGGTCTCTAGATTTCTAGATTCCCCATAGGGTATGCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp GGGGGTGCTTTAGGTATCCAGGCAGGTAGGTGGTCAGCGTTGGCCTaGGGTCTTGGTGGTTTCACCACTTTTACCCAACCCAGTGCACTA +
Preference number: 5 (lower is better)
Translates to: GGALGIQAGRWSALA*GLGGFTTFTQPSAL
Trigger: TAGTGCACTGGGTTGGGTAAAAGTGGTGAAACCACCAAGACCCCAGGCCAACGCTGACCACCTACCTGCCTGGATACCTAAAGCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCGGTGGCTGCCGCTTaGTGGGTGCGCTCCGCTACC +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPVAAA*WVRSAT
Trigger: GGTAGCGGAGCGCACCCACAAAGCGGCAGCCACCGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGCTCCACGCTCCCCCTaGTCTCCTGGCTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDAPRSP*SPGCPG
Trigger: CCCAGGGCAGCCAGGAGACAAGGGGGAGCGTGGAGC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp TTCAGGGCAGTCATTCGACTGGGCCGTGATCCTCTTTGGGTTCAGGGGCTGTTGTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 5 (lower is better)
Translates to: FRAVIRLGRDPLWVQGLLSGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...CAACAGCCCCTGAACCCAAAGAGGATCACGGCCCAGTCGAATGACTGCCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS-3UTR CAA 90 bp GCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATCTTCAGGGCAATTATTaGGCTGGAGCGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASQHLSSGWPPLAPGHNNLQGNY*AGAQSC
Trigger: GCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAAG...ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CAA 90 bp ATCACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCAGGGCCAGTCGCACTGAATaGAGGAGAGGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ITCSSSLGLVSHLRPMGRASRTE*RRGSSF
Trigger: GAAGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGC...CCTGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTGGCCTGGAACTCCAATaGGTCCTGGAGTACCGGGTA +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIGLELQ*VLEYRV
Trigger: TACCCGGTACTCCAGGACCAATTGGAGTTCCAGGCC...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674050.1
CDS TCA 90 bp CTGGAACGTCCGCCTTTTTATGACCGGGGGTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAGCTTCAGGGCAATTATTTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LERPPFYDRGWSQSH*IEERQQLQGNYLAG
Trigger: TCCAGCCAAATAATTGCCCTGAAGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCACCCCCGGTCATAAAAAGGCGGACGTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398978.8
ENST00000479733.5
CDS TCA 90 bp TGTGGATGGTGGCAGGGGGATATGGAGGGCAGGGCAGGCAGAGAATaGAAAGTAATGTATGGTGAGGAACAGAGAGGCCAAGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CGWWQGDMEGRAGRE*KVMYGEEQRGQGSC
Trigger: GCAGCTGCCTTGGCCTCTCTGTTCCTCACCATACATTACTTTTCATTCTCTGCCTGCCCTGCCCTCCATATCCCCCTGCCACCATCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp GCAGGACCAGCAGGGACAGGAAGCATGCTACCCGCCTGCTTGCTCTaGACTCTCCTTTTGTTGCCTATGCTCCTCCTAAAAAGTCCCTAC +
Preference number: 5 (lower is better)
Translates to: AGPAGTGSMLPACLL*TLLLLPMLLLKSPY
Trigger: GTAGGGACTTTTTAGGAGGAGCATAGGCAACAAAAGGAGAGTGCAGAGCAAGCAGGCGGGTAGCATGCTTCCTGTCCCTGCTGGTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp CAGGGTTTGGCAGGACCAGCAGGGACAGGAAGCATGCTACCCGCCTaGTTGCTCTGCACTCTCCTTTTGTTGCCTATGCTCCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: QGLAGPAGTGSMLPA*LLCTLLLLPMLLLK
Trigger: TTTTAGGAGGAGCATAGGCAACAAAAGGAGAGTGCAGAGCAAGCAGGCGGGTAGCATGCTTCCTGTCCCTGCTGGTCCTGCCAAACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp CTAGATAATGAAGAGGCGGCACGAGAGAGTCCAAGGGATGGTCACTaGACACCAGCACAGCAAGTGCAAAGGCCCTGGTGGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: LDNEEAARESPRDGH*TPAQQVQRPWWAVT
Trigger: TGTAACTGCCCACCAGGGCCTTTGCACTTGCTGTGCTGGTGTGCAGTGACCATCCCTTGGACTCTCTCGTGCCGCCTCTTCATTATCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673927.1
CDS CCA 90 bp AGTGAAGTGTTCCCTTCAGCTTCTTTTGCAGTAAGAGGATCAGCGTaGAGGCCTAGACTGTCCATGCCTAGAGAGGGACTGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SEVFPSASFAVRGSA*RPRLSMPREGLGRR
Trigger: CCGCCTGCCCAGTCCCTCTCTAGGCATGGACAGTCTAGGCCTCCACGCTGATCCTCTTACTGCAAAAGAAGCTGAAGGGAACACTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp TATGGGGAATCTAGAAATCTAGAGACCCAGTGGGGAAGGCGAGGCTaGGCCAAGGGCAAAGGTCTGGTTCTCAGCCCAAGTCTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: YGESRNLETQWGRRG*AKGKGLVLSPSLLD
Trigger: GTCTAGCAGACTTGGGCTGAGAACCAGACCTTTGCCCTTGGCCCAGCCTCGCCTTCCCCACTGGGTCTCTAGATTTCTAGATTCCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp TGCAGGATGGCCCTGACATGCCTTTGGCAAGAAGACAAGGGTTCCTaGCGAAGCCTTAGACCTTGCTGGGAATTTGGGGGTGAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: CRMALTCLWQEDKGS*RSLRPCWEFGGEVQ
Trigger: CTGCACTTCACCCCCAAATTCCCAGCAAGGTCTAAGGCTTCGCCAGGAACCCTTGTCTTCTTGCCAAAGGCATGTCAGGGCCATCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS-3UTR CAA 90 bp GGAAGCCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGGCAGGGGGAAAGGGCTaGTATCGCTGGAAAACGTCC +
Preference number: 5 (lower is better)
Translates to: GSLSLLLLHLVLLPPLVQAGGKG*YRWKTS
Trigger: GGACGTTTTCCAGCGATACAAGCCCTTTCCCCCTGC...CTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp GGTTTCCCTTGTCCCCGGGTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTTCTCGTCCAGCAGTaGATTGACTCGTCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: GFPCPRVVHVNQEAQLLPFLVQQ*IDSSQN
Trigger: ATTTTGGGACGAGTCAATCAACTGCTGGACGAGAAA...CGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCACCCGGGGACAAGGGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATCCTGGGTGGCCCGGTTaGCCGTCCAGCCCAATGGGA +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDPGWPG*PSSPMG
Trigger: TCCCATTGGGCTGGACGGCAAACCGGGCCACCCAGG...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATATTCCGGGCGCCCCCTaGGCTCCATGCTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDIPGAP*APCLPG
Trigger: GCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAAT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTCCTCCTCCAATGGAGTaGCCAGCATCGCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LASTSVLAGPLWHQDTIIPPPME*PASPFS
Trigger: AGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAGG...AATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDCPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp ACACACACAGGCCAATCCAAGGTTAGAGGCATCACTTGTTCCAGCAGCCTTGGAATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: THTGQSKVRGITCSSSLGIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...TCCAAGGCTGCTGGAACAAGTGATGCCTCTAACCTTGGATTGGCCTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479733.5
ENST00000673681.1
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS-3UTR CAA 90 bp CCTTTCTCTCCTTTTGCTCCATCTAGTCCTGCTTCCCCCTTTGGTCCAGGAACATTCTCCTCTCCCCAGTaGGGCCATCTAGACCCGGTG +
Preference number: 5 (lower is better)
Translates to: PFSPFAPSSPASPFGPGTFSSPQ*GHLDPV
Trigger: CACCGGGTCTAGATGGCCCAACTGGGGAGAGGAGAA...TGTTCCTGGACCAAAGGGGGAAGCAGGACTAGATGGAGCAAAAGGAGAGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS-3UTR CAA 90 bp GTGGTCCATGTAAACCAGGAAGCCCAGCTGCTCCCGTTGGTCCTGTCATCCCAGGCCTCAGAGCCAGATTaGTGGACTGAAACCCTTTTG +
Preference number: 5 (lower is better)
Translates to: VVHVNQEAQLLPLVLSSQASEPD*WTETLL
Trigger: CAAAAGGGTTTCAGTCCACAAATCTGGCTCTGAGGC...CTGGGATGACAGGACCAACGGGAGCAGCTGGGCTTCCTGGTTTACATGGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS TCA 90 bp GGGCATGAAGGGACAGGCAACCTCATGAGTATTGCAGGATGGCCCTaGCATGCCTTTGGCAAGAAGACAAGGGTTCCTGGCGAAGCCTTA +
Preference number: 5 (lower is better)
Translates to: GHEGTGNLMSIAGWP*HAFGKKTRVPGEAL
Trigger: TAAGGCTTCGCCAGGAACCCTTGTCTTCTTGCCAAAGGCATGTCAGGGCCATCCTGCAATACTCATGAGGTTGCCTGTCCCTTCATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp GATGAGTATCAGAGGCAGCCAAAACCAACTTCAGGGTGGGAGAGCTaGCTGGCATCAAGTGGCTGTGCTTTAGAGGTAGCTGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: DEYQRQPKPTSGWES*LASSGCALEVAAAG
Trigger: TCCTGCTGCAGCTACCTCTAAAGCACAGCCACTTGATGCCAGCCAGCTCTCCCACCCTGAAGTTGGTTTTGGCTGCCTCTGATACTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp GACAGGCAACCTCATGAGTATTGCAGGATGGCCCTGACATGCCTTTaGCAAGAAGACAAGGGTTCCTGGCGAAGCCTTAGACCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: DRQPHEYCRMALTCL*QEDKGSWRSLRPCW
Trigger: CCAGCAAGGTCTAAGGCTTCGCCAGGAACCCTTGTCTTCTTGCCAAAGGCATGTCAGGGCCATCCTGCAATACTCATGAGGTTGCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp GTGGGCTGCCCATCCCTGCAGCTGCTCATGGTAGGGTCATCAGTCTaGAAGTCAGCTGCAGCTTTGGAAGGATCTGCATGCTGTAATTTG +
Preference number: 5 (lower is better)
Translates to: VGCPSLQLLMVGSSV*KSAAALEGSACCNL
Trigger: CAAATTACAGCATGCAGATCCTTCCAAAGCTGCAGCTGACTTCCAGACTGATGACCCTACCATGAGCAGCTGCAGGGATGGGCAGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 90 bp ATGACACCTCTGACCTGCTTTTGTGGCGCTTTAACTAGGTCTAAGTaGAGCTTGGCAGGAGGACGAGGCCAGCCTCCAGGGATGGATTCT +
Preference number: 5 (lower is better)
Translates to: MTPLTCFCGALTRSK*SLAGGRGQPPGMDS
Trigger: AGAATCCATCCCTGGAGGCTGGCCTCGTCCTCCTGCCAAGCTCCACTTAGACCTAGTTAAAGCGCCACAAAAGCAGGTCAGAGGTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS-3UTR CAA 90 bp CATGAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACATTTCTCGTCCAGCAGTaGATTGACTCGTCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: HELASTSVLAGPLWHQDTFLVQQ*IDSSQN
Trigger: ATTTTGGGACGAGTCAATCAACTGCTGGACGAGAAA...TGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS GCA 90 bp GTGGGAGAGCTGGCTGGCATCAAGTGGCTGTGCTTTAGAGGTAGCTaGAGCAGGAAGCCAGGAAACATCCCAGTAAACTTTGCATGCAAG +
Preference number: 5 (lower is better)
Translates to: VGELAGIKWLCFRGS*SRKPGNIPVNFACK
Trigger: CTTGCATGCAAAGTTTACTGGGATGTTTCCTGGCTTCCTGCTGCAGCTACCTCTAAAGCACAGCCACTTGATGCCAGCCAGCTCTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp AAAACCAACTTCAGGGTGGGAGAGCTGGCTGGCATCAAGTGGCTGTaGTTTAGAGGTAGCTGCAGCAGGAAGCCAGGAAACATCCCAGTA +
Preference number: 5 (lower is better)
Translates to: KTNFRVGELAGIKWL*FRGSCSRKPGNIPV
Trigger: TACTGGGATGTTTCCTGGCTTCCTGCTGCAGCTACCTCTAAAGCACAGCCACTTGATGCCAGCCAGCTCTCCCACCCTGAAGTTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp GGGTCATCAGTCTGGAAGTCAGCTGCAGCTTTGGAAGGATCTGCATaGTGTAATTTGTCTGCCTGGGGCAAAGGCACACCAAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: GSSVWKSAAALEGSA*CNLSAWGKGTPRAV
Trigger: TACAGCCCTTGGTGTGCCTTTGCCCCAGGCAGACAAATTACAGCATGCAGATCCTTCCAAAGCTGCAGCTGACTTCCAGACTGATGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 90 bp CAGCTTGGAGATGAGTATCAGAGGCAGCCAAAACCAACTTCAGGGTaGGAGAGCTGGCTGGCATCAAGTGGCTGTGCTTTAGAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: QLGDEYQRQPKPTSG*ESWLASSGCALEVA
Trigger: AGCTACCTCTAAAGCACAGCCACTTGATGCCAGCCAGCTCTCCCACCCTGAAGTTGGTTTTGGCTGCCTCTGATACTCATCTCCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp TCTGACGTCATCCACCCACGCCAGGGGCTGAAACCTCTCATCACCTaGCATTCAGCAGAAATTGGTCCCAATATGGAGGGCTTAGGAAGT +
Preference number: 5 (lower is better)
Translates to: SDVIHPRQGLKPLIT*HSAEIGPNMEGLGS
Trigger: ACTTCCTAAGCCCTCCATATTGGGACCAATTTCTGCTGAATGCCAGGTGATGAGAGGTTTCAGCCCCTGGCGTGGGTGGATGACGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp ACACATTGTACAATCAGGCCTGTTTCACTACATTCAGACGGGGCTTaGCAAGGTGAACCCACCCTGATGGGGACTGAGAAGGCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: THCTIRPVSLHSDGA*QGEPTLMGTEKAWW
Trigger: CCACCAAGCCTTCTCAGTCCCCATCAGGGTGGGTTCACCTTGCCAAGCCCCGTCTGAATGTAGTGAAACAGGCCTGATTGTACAATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 90 bp GTTCGCCACCAGCTTCCTGGTAACGGTGCTGTGCTATTCACTGGGTaGAGTGAAAATGAGTTGTTACATACCCAGGGCTTAGTGCGGTGC +
Preference number: 5 (lower is better)
Translates to: VRHQLPGNGAVLFTG*SENELLHTQGLVRC
Trigger: GCACCGCACTAAGCCCTGGGTATGTAACAACTCATTTTCACTCCACCCAGTGAATAGCACAGCACCGTTACCAGGAAGCTGGTGGCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 90 bp TCAGCTGCAGCTTTGGAAGGATCTGCATGCTGTAATTTGTCTGCCTaGGGCAAAGGCACACCAAGGGCTGTAGCTAAAGATGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: SAAALEGSACCNLSA*GKGTPRAVAKDAPA
Trigger: TGCTGGGGCATCTTTAGCTACAGCCCTTGGTGTGCCTTTGCCCCAGGCAGACAAATTACAGCATGCAGATCCTTCCAAAGCTGCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS-3UTR CAA 90 bp GAGCTAGCCAGCACCTCAGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATATTTCTCGTCCAGCAGTaGATTGACTCGTCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: ELASTSVLAGPLWHQDTIFLVQQ*IDSSQN
Trigger: ATTTTGGGACGAGTCAATCAACTGCTGGACGAGAAA...TATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTGGCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp ACTTGTTCCAGCAGCCTTGGACTGGTAAGCCATCTTCGCCCAATGGGCATGGGGTGGACTGAAACCCTTTaGCTTCACAACCAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: TCSSSLGLVSHLRPMGMGWTETL*LHNQAC
Trigger: GCAAGCTTGGTTGTGAAGCAAAAGGGTTTCAGTCCA...CCCCATGCCCATTGGGCGAAGATGGCTTACCAGTCCAAGGCTGCTGGAACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS TCA 90 bp TTTGAGTCCGCTCTCTTATCAGCAGGCATAGGAGGAACAGTGGTTTaGATGTCAGCTGGTATGCAGGGGGATAGTCAGTGTGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: FESALLSAGIGGTVV*MSAGMQGDSQCASG
Trigger: CCCACTGGCACACTGACTATCCCCCTGCATACCAGCTGACATTCAAACCACTGTTCCTCCTATGCCTGCTGATAAGAGAGCGGACTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 90 bp TTTCCCTTGAGAGCAGATGCAGATTGTGCTAGAGGAGATTCTGACTaGACAGTGAAGATGGAGGAGCTCAGGGCTGCCTCCTCTACAGAG +
Preference number: 5 (lower is better)
Translates to: FPLRADADCARGDSD*TVKMEELRAASSTE
Trigger: CTCTGTAGAGGAGGCAGCCCTGAGCTCCTCCATCTTCACTGTCCAGTCAGAATCTCCTCTAGCACAATCTGCATCTGCTCTCAAGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 90 bp GGTTTTGAAGGTGGAGCACAGACCACAAGCAACAGCAGTATGGAATaGTGTGTGATGATACGGGCCTCTAACAGGTCCCCACCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: GFEGGAQTTSNSSME*CVMIRASNRSPPEA
Trigger: AGCTTCAGGTGGGGACCTGTTAGAGGCCCGTATCATCACACACCATTCCATACTGCTGTTGCTTGTGGTCTGTGCTCCACCTTCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCCTGGGTGGCCCGGTTaGCCGTCCAGCCCAATGGGA +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTPGWPG*PSSPMG
Trigger: TCCCATTGGGCTGGACGGCAAACCGGGCCACCCAGG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGGCCTGGAACTCCAATaGGTCCTGGAGTACCCGGTG +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDGLELQ*VLEYPV
Trigger: CACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000673977.1
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATATCCCAATGGCACCTTaGTCCCCTGGGAGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDIPMAP*SPGSPG
Trigger: ACCCGGACTCCCAGGGGACAAAGGTGCCATTGGGAT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATACCTCTGCTCCTGGATaGCCCTTCTCCCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDTSAPG*PFSPAS
Trigger: AGAAGCCGGGGAGAAGGGCAATCCAGGAGCAGAGGT...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS TCA 90 bp CTAGCTGGTATCTGGTGGCAGCTTTGTCTAGAATCAGCTTGGAGATaGGTATCAGAGGCAGCCAAAACCAACTTCAGGGTGGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LAGIWWQLCLESAWR*VSEAAKTNFRVGEL
Trigger: CAGCTCTCCCACCCTGAAGTTGGTTTTGGCTGCCTCTGATACTCATCTCCAAGCTGATTCTAGACAAAGCTGCCACCAGATACCAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp GCTGGGAATTTGGGGGTGAAGTGCAGTAAAAACATGGGAATCAACTaGACACCGTCGGTCTCCTTTGTTGGTAGCAACCATGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: AGNLGVKCSKNMGIN*TPSVSFVGSNHAAP
Trigger: AGGAGCTGCATGGTTGCTACCAACAAAGGAGACCGACGGTGTGCAGTTGATTCCCATGTTTTTACTGCACTTCACCCCCAAATTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp GTTCCTGGCGAAGCCTTAGACCTTGCTGGGAATTTGGGGGTGAAGTaGAGTAAAAACATGGGAATCAACTGCACACCGTCGGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VPGEALDLAGNLGVK*SKNMGINCTPSVSF
Trigger: AAAGGAGACCGACGGTGTGCAGTTGATTCCCATGTTTTTACTGCACTTCACCCCCAAATTCCCAGCAAGGTCTAAGGCTTCGCCAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGCAGGGGGAAAGGGCTaGTATCGCTGGAAAACGTCC +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDAGGKG*YRWKTS
Trigger: GGACGTTTTCCAGCGATACAAGCCCTTTCCCCCTGC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCATCCTGGAGATGTCTTaGGGGCCTCCCGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTILEMS*GPPGAS
Trigger: GGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGAT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCCCTGGGTGGCCCGGTTaGCCGTCCAGCCCAATGGGA +
Preference number: 5 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAPGWPG*PSSPMG
Trigger: TCCCATTGGGCTGGACGGCAAACCGGGCCACCCAGG...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCCTGGGTGGCCCGGTTaGCCGTCCAGCCCAATGGGA +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHPGWPG*PSSPMG
Trigger: TCCCATTGGGCTGGACGGCAAACCGGGCCACCCAGG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGACCCATGTCGCCCTTaGGTCCTGGGTGGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTDPCRP*VLGGPV
Trigger: AACCGGGCCACCCAGGACCAAAGGGCGACATGGGTC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACATTCCGGGCGCCCCCTaGGCTCCATGCTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GFKILLDTPSLANIMDLYIPGAP*APCLPG
Trigger: GCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAAT...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATTCCGGGCGCCCCCTaGGCTCCATGCTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHIPGAP*APCLPG
Trigger: GCCAGGCAAGCATGGAGCCAAGGGGGCGCCCGGAAT...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATGTCCTGCTTCCCCCTTaGGTCCAGGAACACCTTGGA +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDVLLPP*VQEHLG
Trigger: TCCAAGGTGTTCCTGGACCAAAGGGGGAAGCAGGAC...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHCPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CAA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTGCCCCTCTCGCCCTTaGGTCCCGCTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LSKYHGPLHLCEFTHELACPSRP*VPLGLE
Trigger: TTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTGGTCCAGGAACACCTaGGAGCCCCGGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAWSRNT*EPRRSG
Trigger: CCCGGACCTCCGGGGCTCCAAGGTGTTCCTGGACCA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000674050.1
CDS TCA 90 bp AGGTTTGTTACAGACAGGATGGGGACTGCTGGTCTCTGTTTCCCTTaGGAGCAGATGCAGATTGTGCTAGAGGAGATTCTGACTGGACAG +
Preference number: 5 (lower is better)
Translates to: RFVTDRMGTAGLCFP*EQMQIVLEEILTGQ
Trigger: CTGTCCAGTCAGAATCTCCTCTAGCACAATCTGCATCTGCTCTCAAGGGAAACAGAGACCAGCAGTCCCCATCCTGTCTGTAACAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS TCA 90 bp GTTGTAAGAAAGAAACAAAGTCTGCCCACATTCCCCTCGGTCATCTaGTGTTTCCCCTCCTTGGATTTCATGGGACCGATTCACCCGTCC +
Preference number: 5 (lower is better)
Translates to: VVRKKQSLPTFPSVI*CFPSLDFMGPIHPS
Trigger: GGACGGGTGAATCGGTCCCATGAAATCCAAGGAGGGGAAACATCAGATGACCGAGGGGAATGTGGGCAGACTTTGTTTCTTTCTTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCGGCGCCTCTGTAACTaGACACACTCCCTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHRRLCN*THSLRR
Trigger: CCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCCG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGACCCATGTCGCCCTTaGGTCCTGGGTGGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: GFKILLDTPSLANIMDLYDPCRP*VLGGPV
Trigger: AACCGGGCCACCCAGGACCAAAGGGCGACATGGGTC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGACCCATGTCGCCCTTaGGTCCTGGGTGGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHDPCRP*VLGGPV
Trigger: AACCGGGCCACCCAGGACCAAAGGGCGACATGGGTC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCCCCTTGGCTCCATGCTaGCCTGGCATCCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTPLAPC*PGIPGM
Trigger: CATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGGG...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGCTCCTGGGTCTCCCTaGGTTCCTGGGATCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GFKILLDTPSLANIMDLYAPGSP*VPGIPG
Trigger: GCCAGGGATCCCAGGAACCAAGGGAGACCCAGGAGC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645393.2
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDSGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398975.6
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS TCA 90 bp TCTGCTGCCACTGGAACAGGACTGGATTCGTTGAGCACAGATTCTTaGACATGTTGGAGTCTCCGGTCCCTTTATGAGGATGAACCTTGT +
Preference number: 5 (lower is better)
Translates to: SAATGTGLDSLSTDS*TCWSLRSLYEDEPC
Trigger: ACAAGGTTCATCCTCATAAAGGGACCGGAGACTCCAACATGTTCAAGAATCTGTGCTCAACGAATCCAGTCCTGTTCCAGTGGCAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS GCA 90 bp AGGTGGAAACAAATCCGGCTATTTTACCATTGGTTAAAGGTCACATaGAGCTATAGTGCAACGTCAATAGGGGCTGTCCTAGCCCGTGGG +
Preference number: 5 (lower is better)
Translates to: RWKQIRLFYHWLKVT*SYSATSIGAVLARG
Trigger: CCCACGGGCTAGGACAGCCCCTATTGACGTTGCACTATAGCTGCATGTGACCTTTAACCAATGGTAAAATAGCCGGATTTGTTTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 90 bp CCCGTCCTCCTTTGTGCTGGGGCTCTTACTGGGAGAGTTTCCATTTaGAAGTCTGAACATTCCCCCACATGCATTTCATTAAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: PVLLCAGALTGRVSI*KSEHSPTCISLRKP
Trigger: TGGCTTTCTTAATGAAATGCATGTGGGGGAATGTTCAGACTTGCAAATGGAAACTCTCCCAGTAAGAGCCCCAGCACAAAGGAGGACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 90 bp ACGCCAGGGGCTGAAACCTCTCATCACCTGGCATTCAGCAGAAATTaGTCCCAATATGGAGGGCTTAGGAAGTCTGGTTATCTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: TPGAETSHHLAFSRN*SQYGGLRKSGYLVV
Trigger: TACTACAAGATAACCAGACTTCCTAAGCCCTCCATATTGGGACCAATTTCTGCTGAATGCCAGGTGATGAGAGGTTTCAGCCCCTGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp GCAAATATAGTAGACGGGGCTGGAATTTGGGAAAATGCTTTAGCTTaGATGACTGAGGAAGGCCTTTCTGAGGAGGTGGTGTTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ANIVDGAGIWENALA*MTEEGLSEEVVLES
Trigger: CGACTCCAACACCACCTCCTCAGAAAGGCCTTCCTCAGTCATCCAAGCTAAAGCATTTTCCCAAATTCCAGCCCCGTCTACTATATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673927.1
CDS CCA 90 bp AAGCAGAGATTGGTTATCTGGAATGTGGGGAGACTGAGCTGTTCCTaGAGATTGCTCCTCAAGTCCCCAAGGTTTGTTACAGACAGGATG +
Preference number: 5 (lower is better)
Translates to: KQRLVIWNVGRLSCS*RLLLKSPRFVTDRM
Trigger: CATCCTGTCTGTAACAAACCTTGGGGACTTGAGGAGCAATCTCCAGGAACAGCTCAGTCTCCCCACATTCCAGATAACCAATCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGCCAGTCGCACTGAATaGAGGAGAGGCAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHASRTE*RRGSSR
Trigger: CCGGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CAA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCGCCAGTCGCACTGAATaGAGGAGAGGCAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAASRTE*RRGSSR
Trigger: CCGGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGC...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357811.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACCCCTTGGCTCCATGCTaGCCTGGCATCCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHPLAPC*PGIPGM
Trigger: CATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGGG...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACTCTCCCTTGGAGCCCTaGGGGCCATCTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: GFKILLDTPSLANIMDLYSPLEP*GPSGPC
Trigger: ACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAGA...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTCTCCCTTGGAGCCCTaGGGGCCATCTGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LSKYHGPLHLCEFTHELASPLEP*GPSGPC
Trigger: ACAGGGACCAGATGGCCCCAAGGGCTCCAAGGGAGA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCTTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGGCCTGGAACTCCAATaGGTCCTGGAGTACCCGGTG +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTGLELQ*VLEYPV
Trigger: CACCGGGTACTCCAGGACCAATTGGAGTTCCAGGCC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000673977.1
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGCCCCCTTCTCACCCTaGGTTCCTGGGATCCCTGGC +
Preference number: 5 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMAPFSP*VPGIPG
Trigger: GCCAGGGATCCCAGGAACCAAGGGTGAGAAGGGGGC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000674050.1
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCACCTCTGCTCCTGGATaGCCCTTCTCCCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTTSAPG*PFSPAS
Trigger: AGAAGCCGGGGAGAAGGGCAATCCAGGAGCAGAGGT...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS TCA 90 bp CCTTTGTGCTGGGGCTCTTACTGGGAGAGTTTCCATTTGCAAGTCTaGACATTCCCCCACATGCATTTCATTAAGAAAGCCACTGCTAGG +
Preference number: 5 (lower is better)
Translates to: PLCWGSYWESFHLQV*TFPHMHFIKKATAR
Trigger: CCTAGCAGTGGCTTTCTTAATGAAATGCATGTGGGGGAATGTTCAGACTTGCAAATGGAAACTCTCCCAGTAAGAGCCCCAGCACAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS TCA 90 bp ATTGTAAGTGTGACTCTGCTGCCACTGGAACAGGACTGGATTCGTTaGGCACAGATTCTTGAACATGTTGGAGTCTCCGGTCCCTTTATG +
Preference number: 5 (lower is better)
Translates to: IVSVTLLPLEQDWIR*AQILEHVGVSGPFM
Trigger: CATAAAGGGACCGGAGACTCCAACATGTTCAAGAATCTGTGCTCAACGAATCCAGTCCTGTTCCAGTGGCAGCAGAGTCACACTTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGGTGTCTGCAGAGCAGTaGGTGCCGCGCTGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMVSAEQ*VPRCQS
Trigger: GGACTGACAGCGCGGCACCAACTGCTCTGCAGACAC...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp AAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCAGCACCGCAGGGGGAAAGGGCTaGTATCGCTGGAAAACGTCC +
Preference number: 5 (lower is better)
Translates to: KYHGPLHLCEFTHELASTAGGKG*YRWKTS
Trigger: GGACGTTTTCCAGCGATACAAGCCCTTTCCCCCTGC...GGTGCTGGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAATAGCCGTCTCCATTaGCTGCTCCCCGCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMNSRLH*LLPALR
Trigger: GCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTATT...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCCTTGGCTCCATGCTaGCCTGGCATCCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPLAPC*PGIPGM
Trigger: CATGCCAGGGATGCCAGGCAAGCATGGAGCCAAGGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCTTCCCTGGTTCTCCCTaGGAGCCCTTGGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAFPGSP*EPLGPS
Trigger: AGATGGCCCCAAGGGCTCCAAGGGAGAACCAGGGAA...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: GFKILLDTPSLANIMDLYIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS-3UTR CAA 90 bp CTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGAGCTAGCCATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: LSKYHGPLHLCEFTHELAIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...GGCTAGCTCATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000673977.1
ENST00000674050.1
CDS-3UTR CAA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACGCAGGGGGAAAGGGCTaGTATCGCTGGAAAACGTCC +
Preference number: 5 (lower is better)
Translates to: GFKILLDTPSLANIMDLYAGGKG*YRWKTS
Trigger: GGACGTTTTCCAGCGATACAAGCCCTTTCCCCCTGC...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGATCCCAGGGTCTCCTTaGCTGCCCCTCTCGCCCTTT +
Preference number: 5 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMIPGSP*LPLSPF
Trigger: AAAGGGCGAGAGGGGCAGCAAAGGAGACCCTGGGAT...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673681.1
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACGCCAGTCGCACTGAATaGAGGAGAGGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHASRTE*RRGSSF
Trigger: GAAGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGC...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398978.8
CDS TCA 90 bp CCATGGTTACTTGGCACAGCCTCTCTAGAATTGGGACGTGGTAATTaGGAGAAAACAAAGTTTTTGAGTCCGCTCTCTTATCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PWLLGTASLELGRGN*EKTKFLSPLSYQQA
Trigger: TGCCTGCTGATAAGAGAGCGGACTCAAAAACTTTGTTTTCTCTCAATTACCACGTCCCAATTCTAGAGAGGCTGTGCCAAGTAACCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 90 bp CAGAACCTCAGAAGGAGGTGGAAACAAATCCGGCTATTTTACCATTaGTTAAAGGTCACATGCAGCTATAGTGCAACGTCAATAGGGGCT +
Preference number: 5 (lower is better)
Translates to: QNLRRRWKQIRLFYH*LKVTCSYSATSIGA
Trigger: AGCCCCTATTGACGTTGCACTATAGCTGCATGTGACCTTTAACCAATGGTAAAATAGCCGGATTTGTTTCCACCTCCTTCTGAGGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS-3UTR CAA 90 bp AGTTCTGGCTGGCCCCCTTTGGCACCAGGACACAATAATTTATTAAGCTTCGATTTTCTCGTCCAGCAGTaGATTGACTCGTCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: SSGWPPLAPGHNNLLSFDFLVQQ*IDSSQN
Trigger: ATTTTGGGACGAGTCAATCAACTGCTGGACGAGAAA...ATCGAAGCTTAATAAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
CDS-3UTR CAA 90 bp GACACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACTCTGGCTGGCCCCCTTaGGCACCAGGACACAATAAT +
Preference number: 5 (lower is better)
Translates to: DTPSLANIMDLYIYVNSHSGWPP*APGHNN
Trigger: ATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGA...GTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000673768.1
ENST00000674050.1
CDS-3UTR CAA 90 bp ACACCTAGCTTAGCAAATATCATGGACCTCTACATTTATGTGAATTCACACATGCCTCCTCCAATGGAGTaGCCAGCATCGCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: TPSLANIMDLYIYVNSHMPPPME*PASPFS
Trigger: AGAGAAAGGCGATGCTGGCAACTCCATTGGAGGAGG...CATGTGTGAATTCACATAAATGTAGAGGTCCATGATATTTGCTAAGCTAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000645393.2
ENST00000674050.1
CDS TCA 90 bp CTGATTGTTGTAACCACTGCATTGTCCCAGATTGGACTTAAGGTGTaGATGAGTAGTCTTGAAGCTCTCTGGTTGCTTCTCCAAGACATT +
Preference number: 5 (lower is better)
Translates to: LIVVTTALSQIGLKV*MSSLEALWLLLQDI
Trigger: AATGTCTTGGAGAAGCAACCAGAGAGCTTCAAGACTACTCATTCACACCTTAAGTCCAATCTGGGACAATGCAGTGGTTACAACAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS GCA 90 bp CTTACTGGGAGAGTTTCCATTTGCAAGTCTGAACATTCCCCCACATaGATTTCATTAAGAAAGCCACTGCTAGGCATGAATTTTAGAAGC +
Preference number: 5 (lower is better)
Translates to: LTGRVSICKSEHSPT*ISLRKPLLGMNFRS
Trigger: GCTTCTAAAATTCATGCCTAGCAGTGGCTTTCTTAATGAAATGCATGTGGGGGAATGTTCAGACTTGCAAATGGAAACTCTCCCAGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 90 bp AAAAGAATAATGCCTCTATCTGGAAAGCCTACCTCTGAAACTTTGTaGCAAACTCCTACAAAGCCGTCAAGACTCTGCCCAAATAGAAAG +
Preference number: 5 (lower is better)
Translates to: KRIMPLSGKPTSETL*QTPTKPSRLCPNRK
Trigger: CTTTCTATTTGGGCAGAGTCTTGACGGCTTTGTAGGAGTTTGCCACAAAGTTTCAGAGGTAGGCTTTCCAGATAGAGGCATTATTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 90 bp TGTCTATTTCTTTTCTCTACTACAGGTCAGAACCTCAGAAGGAGGTaGAAACAAATCCGGCTATTTTACCATTGGTTAAAGGTCACATGC +
Preference number: 5 (lower is better)
Translates to: CLFLFSTTGQNLRRR*KQIRLFYHWLKVTC
Trigger: GCATGTGACCTTTAACCAATGGTAAAATAGCCGGATTTGTTTCCACCTCCTTCTGAGGTTCTGACCTGTAGTAGAGAAAAGAAATAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 90 bp TATGAGAAGTTACAATATGCAAATATAGTAGACGGGGCTGGAATTTaGGAAAATGCTTTAGCTTGGATGACTGAGGAAGGCCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: YEKLQYANIVDGAGI*ENALAWMTEEGLSE
Trigger: CTCAGAAAGGCCTTCCTCAGTCATCCAAGCTAAAGCATTTTCCCAAATTCCAGCCCCGTCTACTATATTTGCATATTGTAACTTCTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673927.1
CDS-3UTR CAA 90 bp GGGTTTAAAATACTCTTAGACACACCTAGCTTAGCAAATATCATGGACCTCTACTTTCTCGTCCAGCAGTaGATTGACTCGTCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: GFKILLDTPSLANIMDLYFLVQQ*IDSSQN
Trigger: ATTTTGGGACGAGTCAATCAACTGCTGGACGAGAAA...GTAGAGGTCCATGATATTTGCTAAGCTAGGTGTGTCTAAGAGTATTTTAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000645393.2
CDS TCA 90 bp TATAATCATACCCATTTCACTGAGGTATTGAACAAGCTGAATGTGTaGAACATGATAAATGCAGTACCTGGCTCTTCTTACGGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: YNHTHFTEVLNKLNV*NMINAVPGSSYGFN
Trigger: ATTGAAACCGTAAGAAGAGCCAGGTACTGCATTTATCATGTTTCACACATTCAGCTTGTTCAATACCTCAGTGAAATGGGTATGATTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 72 bp CGGAGGGCCCCATGGGCAGAGGTGGGTCGTGGCGGCTaGCGAGGAGCGCAGGGGCCGATTCCGGCGCCTCTG +
Preference number: 6 (lower is better)
Translates to: RRAPWAEVGRGG*RGAQGPIPAPL
Trigger: CAGAGGCGCCGGAATCGGCCCCTGCGCTCCTCGCCAGCCGCCACGACCCACCTCTGCCCATGGGGCCCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000645393.2
ENST00000673830.1
CDS CCA 72 bp CGCAGCACCCGGGCCTGCAGCTCGGCCGTCCGAAAGTaGGCGAGCAGGCTGAGTGCCAGCGAGCAGAGGGCC +
Preference number: 6 (lower is better)
Translates to: RSTRACSSAVRK*ASRLSASEQRA
Trigger: GGCCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGAGCTGCAGGCCCGGGTGCTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS TCA 72 bp CCTGCAGCTCGGCCGTCCGAAAGTGGGCGAGCAGGCTaGGTGCCAGCGAGCAGAGGGCCAGCGTCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: PAARPSESGRAG*VPASRGPASAA
Trigger: GGCTGCTGACGCTGGCCCTCTGCTCGCTGGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGAGCTGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS CCA 72 bp TCCCCAGGGCCGCGGGCACCGGTGGCTGCCGCTTTGTaGGTGCGCTCCGCTACCATCCTCTCGCGTCTTGAG +
Preference number: 6 (lower is better)
Translates to: SPGPRAPVAAAL*VRSATILSRLE
Trigger: CTCAAGACGCGAGAGGATGGTAGCGGAGCGCACCCACAAAGCGGCAGCCACCGGTGCCCGCGGCCCTGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000520267.5
ENST00000645393.2
ENST00000673830.1
ENST00000673842.1
ENST00000674121.1
CDS GCA 72 bp CAGGGCCGCGGGCACCGGTGGCTGCCGCTTTGTGGGTaGGCTCCGCTACCATCCTCTCGCGTCTTGAGAACC +
Preference number: 6 (lower is better)
Translates to: QGRGHRWLPLCG*APLPSSRVLRT
Trigger: GGTTCTCAAGACGCGAGAGGATGGTAGCGGAGCGCACCCACAAAGCGGCAGCCACCGGTGCCCGCGGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000520267.5
ENST00000645393.2
ENST00000673830.1
ENST00000673842.1
ENST00000674121.1
CDS CAA 90 bp GCGGCTGGCGAGGAGCGCAGGGGCCGATTCCGGCGCCTCTGTAACTaGACACACTCCCTGCGGCGGCACGGATCGGATGAGCAATCCGTG +
Preference number: 6 (lower is better)
Translates to: AAGEERRGRFRRLCN*THSLRRHGSDEQSV
Trigger: CACGGATTGCTCATCCGATCCGTGCCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCCGGAATCGGCCCCTGCGCTCCTCGCCAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS TCA 72 bp AGGAGCGCAGGGGCCGATTCCGGCGCCTCTGTAACTTaGCACACTCCCTGCGGCGGCACGGATCGGATGAGC +
Preference number: 6 (lower is better)
Translates to: RSAGADSGASVT*HTPCGGTDRMS
Trigger: GCTCATCCGATCCGTGCCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCCGGAATCGGCCCCTGCGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS CAA 72 bp GAGGAGCGCAGGGGCCGATTCCGGCGCCTCTGTAACTaGACACACTCCCTGCGGCGGCACGGATCGGATGAG +
Preference number: 6 (lower is better)
Translates to: EERRGRFRRLCN*THSLRRHGSDE
Trigger: CTCATCCGATCCGTGCCGCCGCAGGGAGTGTGTCAAGTTACAGAGGCGCCGGAATCGGCCCCTGCGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357811.8
CDS CCA 72 bp GCCTCCAGTGCCCTTCCTCCGGTTCATGTCGCCCTTTaGTCCTGGGTGGCCCGGTTTGCCGTCCAGCCCAAT +
Preference number: 6 (lower is better)
Translates to: ASSALPPVHVAL*SWVARFAVQPN
Trigger: ATTGGGCTGGACGGCAAACCGGGCCACCCAGGACCAAAGGGCGACATGAACCGGAGGAAGGGCACTGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673755.1
CDS CAA 72 bp TGCCTCCAGTGCCCTTCCTCCGGTTCATGTCGCCCTTaGGTCCTGGGTGGCCCGGTTTGCCGTCCAGCCCAA +
Preference number: 6 (lower is better)
Translates to: CLQCPSSGSCRP*VLGGPVCRPAQ
Trigger: TTGGGCTGGACGGCAAACCGGGCCACCCAGGACCAAAGGGCGACATGAACCGGAGGAAGGGCACTGGAGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673755.1
CDS TCA 72 bp AGGCCAGGGTGCTCTCCATACCCGATTCCGGCCCCCTaGCCGGCTGCAGCATCTTACCTGGGTCACTCCACA +
Preference number: 6 (lower is better)
Translates to: RPGCSPYPIPAP*PAAASYLGHST
Trigger: TGTGGAGTGACCCAGGTAAGATGCTGCAGCCGGTCAGGGGGCCGGAATCGGGTATGGAGAGCACCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS TCA 72 bp TGCTGGAGTGGCCTCCCACCCCACACCTGGCAGGTTTaGGGTCCCTGGGTGTATTGGGTAGTCCCAGGGGAC +
Preference number: 6 (lower is better)
Translates to: CWSGLPPHTWQV*GPWVYWVVPGD
Trigger: GTCCCCTGGGACTACCCAATACACCCAGGGACCTCAAACCTGCCAGGTGTGGGGTGGGAGGCCACTCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683633.1
CDS GCA 72 bp AGGCTGGACTCAGCATTCCTGTGGAATCAGGAGCGGTaGTGCTGGAGTGGCCTCCCACCCCACACCTGGCAG +
Preference number: 6 (lower is better)
Translates to: RLDSAFLWNQER*CWSGLPPHTWQ
Trigger: CTGCCAGGTGTGGGGTGGGAGGCCACTCCAGCAGCACCGCTCCTGATTCCACAGGAATGCTGAGTCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683633.1
CDS CCA 72 bp TCTGCAGAGCAGTTGGTGCCGCGCTGTCAGTCCTTCTaGGCGCCTCGTGTCTCCCGGGCCAGTCAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: SAEQLVPRCQSF*APRVSRASQFQ
Trigger: CTGAAACTGACTGGCCCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000645393.2
ENST00000673830.1
CDS CAA 90 bp CTCGTCCAGCAGTTGATTGACTCGTCCCAAAATAGCCGTCTCCATTaGCTGCTCCCCGCGCTCCGCTTCCAGGCGCAGCACCCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: LVQQLIDSSQNSRLH*LLPALRFQAQHPGL
Trigger: CAGGCCCGGGTGCTGCGCCTGGAAGCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTATTTTGGGACGAGTCAATCAACTGCTGGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS CAA 90 bp TCCTTCTCTCCGCCCAGTCTTTCCCTTCAAGTGTCTGCAGAGCAGTaGGTGCCGCGCTGTCAGTCCTTCTGGGCGCCTCGTGTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SFSPPSLSLQVSAEQ*VPRCQSFWAPRVSR
Trigger: CCGGGAGACACGAGGCGCCCAGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAAAGACTGGGCGGAGAGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000645393.2
ENST00000673830.1
ENST00000674121.1
CDS GCA 72 bp GGAGGAGGTGCATTCCACAGTTTCAGGGTGACCCTGTaGCCCTTCCCCAGCCTGCCACGGTGCGGTATGACA +
Preference number: 6 (lower is better)
Translates to: GGGAFHSFRVTL*PFPSLPRCGMT
Trigger: TGTCATACCGCACCGTGGCAGGCTGGGGAAGGGGCACAGGGTCACCCTGAAACTGTGGAATGCACCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp AGTCCTGAGGGAGCTTGTGGAATGAGAGTCCTCTGCTaGCCTGGTCTGACGTCATCCACCCACGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SPEGACGMRVLC*PGLTSSTHARG
Trigger: GCCCCTGGCGTGGGTGGATGACGTCAGACCAGGGCAGCAGAGGACTCTCATTCCACAAGCTCCCTCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp CTGGACTCAGCATTCCTGTGGAATCAGGAGCGGTGCTaGTGGAGTGGCCTCCCACCCCACACCTGGCAGGTT +
Preference number: 6 (lower is better)
Translates to: LDSAFLWNQERC*WSGLPPHTWQV
Trigger: AACCTGCCAGGTGTGGGGTGGGAGGCCACTCCAGCAGCACCGCTCCTGATTCCACAGGAATGCTGAGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683633.1
CDS CCA 72 bp GATGGTGTCACCTGGGCAGCGACCCACGATCCAACCTaGAAGAATAGGCAGGTGGCCCCTCCTCCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: DGVTWAATHDPT*KNRQVAPPPAH
Trigger: GTGAGCTGGAGGAGGGGCCACCTGCCTATTCTTCCAGGTTGGATCGTGGGTCGCTGCCCAGGTGACACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp CTTTGCCAAGCTAGACAAGCCTGGAGTCCTTGGACCTaGCCGGGCAAGGTGGAGGGAGGGGGCGTGGAGAAT +
Preference number: 6 (lower is better)
Translates to: LCQARQAWSPWT*PGKVEGGGVEN
Trigger: ATTCTCCACGCCCCCTCCCTCCACCTTGCCCGGCCAGGTCCAAGGACTCCAGGCTTGTCTAGCTTGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484990.1
CDS CCA 72 bp ACAAAGCTTTGCCAAGCTAGACAAGCCTGGAGTCCTTaGACCTGGCCGGGCAAGGTGGAGGGAGGGGGCGTG +
Preference number: 6 (lower is better)
Translates to: TKLCQARQAWSP*TWPGKVEGGGV
Trigger: CACGCCCCCTCCCTCCACCTTGCCCGGCCAGGTCCAAGGACTCCAGGCTTGTCTAGCTTGGCAAAGCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484990.1
CDS CCA 72 bp GTCTCCTTTGCTGCCCCTCTCGCCCTTTGGTCCCGCTaGGCCTGGAACTCCAATTGGTCCTGGAGTACCCTC +
Preference number: 6 (lower is better)
Translates to: VSFAAPLALWSR*AWNSNWSWSTL
Trigger: GAGGGTACTCCAGGACCAATTGGAGTTCCAGGCCCAGCGGGACCAAAGGGCGAGAGGGGCAGCAAAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683633.1
CDS CAA 72 bp CCGCCCAGTCTTTCCCTTCAAGTGTCTGCAGAGCAGTaGGTGCCGCGCTGTCAGTCCTTCTGGGCGCCTCGT +
Preference number: 6 (lower is better)
Translates to: PPSLSLQVSAEQ*VPRCQSFWAPR
Trigger: ACGAGGCGCCCAGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAAAGACTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000645393.2
ENST00000673830.1
ENST00000674121.1
CDS CAA 72 bp GAGGTCCTGGTGGGCAGTTACATCCTGGAGATGTCTTaGGGGCCTCCCGGCGCCTCCTTGAGTGGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: EVLVGSYILEMS*GPPGASLSGAS
Trigger: GGAAGCTCCACTCAAGGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCACCAGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS TCA 72 bp TGGGGCTTCAGGAGACCCGGAGCAAGTGCTCAGTCCTaGGGGAGCTTGTGGAATGAGAGTCCTCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: WGFRRPGASAQS*GSLWNESPLLP
Trigger: GGGCAGCAGAGGACTCTCATTCCACAAGCTCCCTCAGGACTGAGCACTTGCTCCGGGTCTCCTGAAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS TCA 72 bp GGGACTGAGAAGGCTTGGTGGTCTCTCCCATGGGTCTaGGGTGCTATTTGGGTTGCCCAGACCCCGCCACCA +
Preference number: 6 (lower is better)
Translates to: GTEKAWWSLPWV*GAIWVAQTPPP
Trigger: TGGTGGCGGGGTCTGGGCAACCCAAATAGCACCTCAGACCCATGGGAGAGACCACCAAGCCTTCTCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp GAGTCCGGGTCTTCCAGTGGGACCAGGAGGTCCTGGTaGGCAGTTACATCCTGGAGATGTCTTTGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ESGSSSGTRRSW*AVTSWRCLWGL
Trigger: GAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCACCAGGACCTCCTGGTCCCACTGGAAGACCCGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000682679.1
CDS CCA 72 bp CCGTGCCACGAAGAAACAGTCTCTGCTGTGGCCCTATaGAGTGCCGGCTGCTCACGGGTAAGCCACTCAGCA +
Preference number: 6 (lower is better)
Translates to: PCHEETVSAVAL*SAGCSRVSHSA
Trigger: TGCTGAGTGGCTTACCCGTGAGCAGCCGGCACTCCATAGGGCCACAGCAGAGACTGTTTCTTCGTGGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp CGATTCCGGCCCCCTGACCGGCTGCAGCATCTTACCTaGGTCACTCCACATCTGAGGGCCCATGGTACACAT +
Preference number: 6 (lower is better)
Translates to: RFRPPDRLQHLT*VTPHLRAHGTH
Trigger: ATGTGTACCATGGGCCCTCAGATGTGGAGTGACCCAGGTAAGATGCTGCAGCCGGTCAGGGGGCCGGAATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 72 bp GTGGGCAGGACAGGGGTAACAAGGGCCACACGCATTTaGGCAGCTGATCAGGATGTGGCCCACCCACGCTTG +
Preference number: 6 (lower is better)
Translates to: VGRTGVTRATRI*AADQDVAHPRL
Trigger: CAAGCGTGGGTGGGCCACATCCTGATCAGCTGCCAAAATGCGTGTGGCCCTTGTTACCCCTGTCCTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 90 bp TGGGACCAGGAGGTCCTGGTGGGCAGTTACATCCTGGAGATGTCTTaGGGGCCTCCCGGCGCCTCCTTGAGTGGAGCTTCCATTTCTCGT +
Preference number: 6 (lower is better)
Translates to: WDQEVLVGSYILEMS*GPPGASLSGASISR
Trigger: ACGAGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCACCAGGACCTCCTGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000682679.1
CDS CAA 90 bp GCACCTCCCCATGCCTCAGAGCCAGATTTGTGGACTGAAACCCTTTaGCTTCACAACCAAGCTTGCCAAGGCGGTGGCCCAGGCCTGCCG +
Preference number: 6 (lower is better)
Translates to: APPHASEPDLWTETL*LHNQACQGGGPGLP
Trigger: CGGCAGGCCTGGGCCACCGCCTTGGCAAGCTTGGTTGTGAAGCAAAAGGGTTTCAGTCCACAAATCTGGCTCTGAGGCATGGGGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS GCA 72 bp CCAGTCTTTCCCTTCAAGTGTCTGCAGAGCAGTTGGTaGCGCGCTGTCAGTCCTTCTGGGCGCCTCGTGTCT +
Preference number: 6 (lower is better)
Translates to: PVFPFKCLQSSW*RAVSPSGRLVS
Trigger: AGACACGAGGCGCCCAGAAGGACTGACAGCGCGGCACCAACTGCTCTGCAGACACTTGAAGGGAAAGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398978.8
ENST00000479733.5
ENST00000645393.2
ENST00000673830.1
ENST00000674121.1
CDS GCA 72 bp CCACGAAGAAACAGTCTCTGCTGTGGCCCTATGGAGTaGCGGCTGCTCACGGGTAAGCCACTCAGCACAAGG +
Preference number: 6 (lower is better)
Translates to: PRRNSLCCGPME*RLLTGKPLSTR
Trigger: CCTTGTGCTGAGTGGCTTACCCGTGAGCAGCCGGCACTCCATAGGGCCACAGCAGAGACTGTTTCTTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp CAGAGATGTCCTTCCGTGCCACGAAGAAACAGTCTCTaGTGTGGCCCTATGGAGTGCCGGCTGCTCACGGGT +
Preference number: 6 (lower is better)
Translates to: QRCPSVPRRNSL*CGPMECRLLTG
Trigger: ACCCGTGAGCAGCCGGCACTCCATAGGGCCACAGCAGAGACTGTTTCTTCGTGGCACGGAAGGACATCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp ATGAACACACACATCCTTTCATCCACAGGCAGCCACTaGTGGGTCCTTCTGAGCTGCTCACCCCGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: MNTHILSSTGSH*WVLLSCSPRLG
Trigger: GCCGAGGCGGGGTGAGCAGCTCAGAAGGACCCAGCAGTGGCTGCCTGTGGATGAAAGGATGTGTGTGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp CTGGCCTGGCTCTGTTCGCCCTTCAGGGCAATTATTTaGCTGGAGCGCAGAGCTGCTGGCATGCTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: LAWLCSPFRAII*LERRAAGMLLR
Trigger: CCTAAGCAGCATGCCAGCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAAGGGCGAACAGAGCCAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000517713.5
ENST00000520133.5
ENST00000674050.1
CDS CCA 72 bp CGTGGAGGCCTAGACTGTCCATGCCTAGAGAGGGACTaGGCAGGCGGGAATAAACTGCTACCACTTCGCCTG +
Preference number: 6 (lower is better)
Translates to: RGGLDCPCLERD*AGGNKLLPLRL
Trigger: CAGGCGAAGTGGTAGCAGTTTATTCCCGCCTGCCCAGTCCCTCTCTAGGCATGGACAGTCTAGGCCTCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp TCTGCTAGACTGGCAGGGCAGACAAGGAGATGGACATaGGGCTTCAGGAGACCCGGAGCAAGTGCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: SARLAGQTRRWT*GFRRPGASAQS
Trigger: GGACTGAGCACTTGCTCCGGGTCTCCTGAAGCCCCATGTCCATCTCCTTGTCTGCCCTGCCAGTCTAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp GGGTTAGGGGGTGCTTTAGGTATCCAGGCAGGTAGGTaGTCAGCGTTGGCCTGGGGTCTTGGTGGTTTCACC +
Preference number: 6 (lower is better)
Translates to: GLGGALGIQAGR*SALAWGLGGFT
Trigger: GGTGAAACCACCAAGACCCCAGGCCAACGCTGACCACCTACCTGCCTGGATACCTAAAGCACCCCCTAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS CAA 72 bp CAGTTGATTGACTCGTCCCAAAATAGCCGTCTCCATTaGCTGCTCCCCGCGCTCCGCTTCCAGGCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: QLIDSSQNSRLH*LLPALRFQAQH
Trigger: GTGCTGCGCCTGGAAGCGGAGCGCGGGGAGCAGCAAATGGAGACGGCTATTTTGGGACGAGTCAATCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS CAA 72 bp GGCTTGGTGGTCTCTCCCATGGGTCTGAGGTGCTATTaGGGTTGCCCAGACCCCGCCACCAAACATCCTGTC +
Preference number: 6 (lower is better)
Translates to: GLVVSPMGLRCY*GCPDPATKHPV
Trigger: GACAGGATGTTTGGTGGCGGGGTCTGGGCAACCCAAATAGCACCTCAGACCCATGGGAGAGACCACCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 90 bp ACAGAGAGGCCAAGGCAGCTGCTGGCAGAACTAAAGGTGCCCAGATaGTGGGAGGGGATTGTGGCTGAGGGAAGACCTGGCCAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: TERPRQLLAELKVPR*WEGIVAEGRPGQCS
Trigger: TGAGCACTGGCCAGGTCTTCCCTCAGCCACAATCCCCTCCCACAATCTGGGCACCTTTAGTTCTGCCAGCAGCTGCCTTGGCCTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 90 bp GTTGACCAGGAGGTCCTGGTGGGCAGTTACATCCTGGAGATGTCTTaGGGGCCTCCCGGCGCCTCCTTGAGTGGAGCTTCCATTTCTCGT +
Preference number: 6 (lower is better)
Translates to: VDQEVLVGSYILEMS*GPPGASLSGASISR
Trigger: ACGAGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCACCAGGACCTCCTGGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520267.5
ENST00000673914.2
ENST00000674121.1
CDS CAA 90 bp GGTTGCCCAGACCCCGCCACCAAACATCCTGTCTCTCACGCATCCTaGATCTCCGTTGCTTTCCGGGTTCTTGCCCCTGAGCCCGCAAAT +
Preference number: 6 (lower is better)
Translates to: GCPDPATKHPVSHAS*ISVAFRVLAPEPAN
Trigger: ATTTGCGGGCTCAGGGGCAAGAACCCGGAAAGCAACGGAGATCAAGGATGCGTGAGAGACAGGATGTTTGGTGGCGGGGTCTGGGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 90 bp CCACGACAGAGGGCACCCCTACACTGGGCAGACAGGAGGTCCCTATaGTTTCCTGGACCTGTGGACTTTGTCGCTCCATCACAGTCTCCT +
Preference number: 6 (lower is better)
Translates to: PRQRAPLHWADRRSL*FPGPVDFVAPSQSP
Trigger: AGGAGACTGTGATGGAGCGACAAAGTCCACAGGTCCAGGAAACAATAGGGACCTCCTGTCTGCCCAGTGTAGGGGTGCCCTCTGTCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS TCA 72 bp GGTGGGGTGAGGGGCATGAAGGGACAGGCAACCTCATaGGTATTGCAGGATGGCCCTGACATGCCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: GGVRGMKGQATS*VLQDGPDMPLA
Trigger: TGCCAAAGGCATGTCAGGGCCATCCTGCAATACTCATGAGGTTGCCTGTCCCTTCATGCCCCTCACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS TCA 72 bp ACCCCGCCACCAAACATCCTGTCTCTCACGCATCCTTaGTCTCCGTTGCTTTCCGGGTTCTTGCCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: TPPPNILSLTHP*SPLLSGFLPLS
Trigger: GCTCAGGGGCAAGAACCCGGAAAGCAACGGAGATCAAGGATGCGTGAGAGACAGGATGTTTGGTGGCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS GCA 72 bp GACCAGCAGGGACAGGAAGCATGCTACCCGCCTGCTTaGTCTGCACTCTCCTTTTGTTGCCTATGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: DQQGQEACYPPA*SALSFCCLCSS
Trigger: GGAGGAGCATAGGCAACAAAAGGAGAGTGCAGAGCAAGCAGGCGGGTAGCATGCTTCCTGTCCCTGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp CCTGGCTCTGTTCGCCCTTCAGGGCAATTATTTGGCTaGAGCGCAGAGCTGCTGGCATGCTGCTTAGGCACT +
Preference number: 6 (lower is better)
Translates to: PGSVRPSGQLFG*SAELLACCLGT
Trigger: AGTGCCTAAGCAGCATGCCAGCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAAGGGCGAACAGAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354547.7
ENST00000517713.5
ENST00000520133.5
ENST00000674050.1
CDS CCA 72 bp GGAAAGAGAGGAACCAAAGGGAAGGAGCTTCTCGCCTaGTTGGCCCTTTACTCCCACACGTCCAGGCATCCC +
Preference number: 6 (lower is better)
Translates to: GKRGTKGKELLA*LALYSHTSRHP
Trigger: GGGATGCCTGGACGTGTGGGAGTAAAGGGCCAACCAGGCGAGAAGCTCCTTCCCTTTGGTTCCTCTCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398969.8
ENST00000682679.1
ENST00000684387.1
CDS CCA 72 bp CAGCGACCCACGATCCAACCTGGAAGAATAGGCAGGTaGCCCCTCCTCCAGCTCACTTCTAGAGCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: QRPTIQPGRIGR*PLLQLTSRASQ
Trigger: CTGAGAAGCTCTAGAAGTGAGCTGGAGGAGGGGCCACCTGCCTATTCTTCCAGGTTGGATCGTGGGTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp GGAAAGAGAGGAACCAAAGGGAAGGAGCTTCTCGCCTaGTTGGCCCTTTACTCCTGGGAGTCCGGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: GKRGTKGKELLA*LALYSWESGSS
Trigger: GGAAGACCCGGACTCCCAGGAGTAAAGGGCCAACCAGGCGAGAAGCTCCTTCCCTTTGGTTCCTCTCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674008.2
ENST00000674040.2
CDS CCA 72 bp CTGACCTGCTTTTGTGGCGCTTTAACTAGGTCTAAGTaGAGCTTGGCAGGAGGACGAGGCCAGCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LTCFCGALTRSK*SLAGGRGQPPG
Trigger: CCCTGGAGGCTGGCCTCGTCCTCCTGCCAAGCTCCACTTAGACCTAGTTAAAGCGCCACAAAAGCAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS CAA 72 bp TCCAGGCAGGTAGGTGGTCAGCGTTGGCCTGGGGTCTaGGTGGTTTCACCACTTTTACCCAACCCAGTGCAC +
Preference number: 6 (lower is better)
Translates to: SRQVGGQRWPGV*VVSPLLPNPVH
Trigger: GTGCACTGGGTTGGGTAAAAGTGGTGAAACCACCAAGACCCCAGGCCAACGCTGACCACCTACCTGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS CAA 90 bp GTCCACCAAGTGGGCAGGACAGGGGTAACAAGGGCCACACGCATTTaGGCAGCTGATCAGGATGTGGCCCACCCACGCTTGTCTATTTCT +
Preference number: 6 (lower is better)
Translates to: VHQVGRTGVTRATRI*AADQDVAHPRLSIS
Trigger: AGAAATAGACAAGCGTGGGTGGGCCACATCCTGATCAGCTGCCAAAATGCGTGTGGCCCTTGTTACCCCTGTCCTGCCCACTTGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS TCA 72 bp TGCCCTGGTCTGACGTCATCCACCCACGCCAGGGGCTaGAACCTCTCATCACCTGGCATTCAGCAGAAATTG +
Preference number: 6 (lower is better)
Translates to: CPGLTSSTHARG*NLSSPGIQQKL
Trigger: CAATTTCTGCTGAATGCCAGGTGATGAGAGGTTTCAGCCCCTGGCGTGGGTGGATGACGTCAGACCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp CAATTATTTGGCTGGAGCGCAGAGCTGCTGGCATGCTaGTTAGGCACTCCCGGTGTGGGTACTCTCCACACT +
Preference number: 6 (lower is better)
Translates to: QLFGWSAELLAC*LGTPGVGTLHT
Trigger: AGTGTGGAGAGTACCCACACCGGGAGTGCCTAAGCAGCATGCCAGCAGCTCTGCGCTCCAGCCAAATAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354547.7
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000674050.1
CDS GCA 72 bp CTGCAGCAGGAAGCCAGGAAACATCCCAGTAAACTTTaGATGCAAGAGGGTGGCATGACTGGGAGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: LQQEARKHPSKL*MQEGGMTGSPQ
Trigger: CTGGGGGCTCCCAGTCATGCCACCCTCTTGCATGCAAAGTTTACTGGGATGTTTCCTGGCTTCCTGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp ACTGGGCAGGCGGGAATAAACTGCTACCACTTCGCCTaGGACGTGCTTGGAAGAGAGGTCCTTAGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: TGQAGINCYHFA*DVLGREVLSCL
Trigger: GAGACAGCTAAGGACCTCTCTTCCAAGCACGTCCCAGGCGAAGTGGTAGCAGTTTATTCCCGCCTGCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp GGCAAAGGTCTGGTTCTCAGCCCAAGTCTGCTAGACTaGCAGGGCAGACAAGGAGATGGACATGGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: GKGLVLSPSLLD*QGRQGDGHGAS
Trigger: TGAAGCCCCATGTCCATCTCCTTGTCTGCCCTGCCAGTCTAGCAGACTTGGGCTGAGAACCAGACCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp TCTAGAAATCTAGAGACCCAGTGGGGAAGGCGAGGCTaGGCCAAGGGCAAAGGTCTGGTTCTCAGCCCAAGT +
Preference number: 6 (lower is better)
Translates to: SRNLETQWGRRG*AKGKGLVLSPS
Trigger: ACTTGGGCTGAGAACCAGACCTTTGCCCTTGGCCCAGCCTCGCCTTCCCCACTGGGTCTCTAGATTTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp GAATCACAGGAGGCCAGAAGGCAGGACACACACCTCTaGAAGAACGGAGCACAGGTCAGTGATGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: ESQEARRQDTHL*KNGAQVSDAEE
Trigger: CTCCTCTGCATCACTGACCTGTGCTCCGTTCTTCCAGAGGTGTGTGTCCTGCCTTCTGGCCTCCTGTGATTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484990.1
CDS CCA 72 bp ACACCAAGAACAAAGCTTTGCCAAGCTAGACAAGCCTaGAGTCCTTGGACCTGGCCGGGCAAGGTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: TPRTKLCQARQA*SPWTWPGKVEG
Trigger: TCCCTCCACCTTGCCCGGCCAGGTCCAAGGACTCCAGGCTTGTCTAGCTTGGCAAAGCTTTGTTCTTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484990.1
CDS CCA 72 bp GATGGAGGAGCTCAGGGCTGCCTCCTCTACAGAGGGTaGTGCCCATTGCAGCTTCTGTCTCTGATGAACACA +
Preference number: 6 (lower is better)
Translates to: DGGAQGCLLYRG*CPLQLLSLMNT
Trigger: TGTGTTCATCAGAGACAGAAGCTGCAATGGGCACCACCCTCTGTAGAGGAGGCAGCCCTGAGCTCCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp CCTCGGTCATCTGATGTTTCCCCTCCTTGGATTTCATaGGACCGATTCACCCGTCCTCCTTTGTGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: PRSSDVSPPWIS*DRFTRPPLCWG
Trigger: GCCCCAGCACAAAGGAGGACGGGTGAATCGGTCCCATGAAATCCAAGGAGGGGAAACATCAGATGACCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 72 bp ATCCTGGAGATGTCTTTGGGGCCTCCCGGCGCCTCCTaGAGTGGAGCTTCCATTTCTCGTCCAGCAGTTGAT +
Preference number: 6 (lower is better)
Translates to: ILEMSLGPPGAS*SGASISRPAVD
Trigger: ATCAACTGCTGGACGAGAAATGGAAGCTCCACTCAAGGAGGCGCCGGGAGGCCCCAAAGACATCTCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000354547.7
ENST00000357811.8
ENST00000398969.8
ENST00000398978.8
ENST00000479733.5
ENST00000517713.5
ENST00000520133.5
ENST00000520267.5
ENST00000522165.5
ENST00000645393.2
ENST00000673628.2
ENST00000673641.2
ENST00000673802.2
ENST00000673830.1
ENST00000673842.1
ENST00000673914.2
ENST00000673957.2
ENST00000674008.2
ENST00000674040.2
ENST00000674121.1
ENST00000682679.1
CDS TCA 72 bp CCGCCTTTTTATGACCGGGGGTGGAGCCAGTCGCACTaGATTGAGGAGAGGCAGCAGCTTCAGGGCAATTAT +
Preference number: 6 (lower is better)
Translates to: PPFYDRGWSQSH*IEERQQLQGNY
Trigger: ATAATTGCCCTGAAGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCACCCCCGGTCATAAAAAGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398978.8
ENST00000479733.5
CDS TCA 72 bp GGGACAGGCAACCTCATGAGTATTGCAGGATGGCCCTaGCATGCCTTTGGCAAGAAGACAAGGGTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: GTGNLMSIAGWP*HAFGKKTRVPG
Trigger: GCCAGGAACCCTTGTCTTCTTGCCAAAGGCATGTCAGGGCCATCCTGCAATACTCATGAGGTTGCCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS TCA 72 bp GACAGGGGTAACAAGGGCCACACGCATTTTGGCAGCTaGTCAGGATGTGGCCCACCCACGCTTGTCTATTTC +
Preference number: 6 (lower is better)
Translates to: DRGNKGHTHFGS*SGCGPPTLVYF
Trigger: GAAATAGACAAGCGTGGGTGGGCCACATCCTGATCAGCTGCCAAAATGCGTGTGGCCCTTGTTACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS TCA 72 bp GGCCCTGGCAGCCCAGGAACCACTCCTTATTGTCTTTaGTCCAGCGCTCTTGCAGTCACTTTTTGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: GPGSPGTTPYCL*SSALAVTFCRP
Trigger: AGGCCTGCAAAAAGTGACTGCAAGAGCGCTGGATCAAAGACAATAAGGAGTGGTTCCTGGGCTGCCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp GAATTGAGGAGAGGCAGCAGCTTCAGGGCAATTATTTaGCTGGAGCGCAGAGCTGCTGGCATGCTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: ELRRGSSFRAII*LERRAAGMLLR
Trigger: CCTAAGCAGCATGCCAGCAGCTCTGCGCTCCAGCCAAATAATTGCCCTGAAGCTGCTGCCTCTCCTCAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398978.8
ENST00000479733.5
CDS CCA 72 bp AATCCTGGACCATCCCCTAGTTCTGATGGTGTCACCTaGGCAGCGACCCACGATCCAACCTGGAAGAATAGG +
Preference number: 6 (lower is better)
Translates to: NPGPSPSSDGVT*AATHDPTWKNR
Trigger: CCTATTCTTCCAGGTTGGATCGTGGGTCGCTGCCCAGGTGACACCATCAGAACTAGGGGATGGTCCAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp GAAACCTCTAGTTCCTGGTTGACCAGGAGGTCCTGGTaGGCAGTTACATCCTGGAGATGTCTTTGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ETSSSWLTRRSW*AVTSWRCLWGL
Trigger: GAGGCCCCAAAGACATCTCCAGGATGTAACTGCCCACCAGGACCTCCTGGTCAACCAGGAACTAGAGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520267.5
ENST00000673914.2
ENST00000674121.1
CDS CCA 72 bp AATGGGACCCGGAAATCCAGGGAAACCTCTAGTTCCTaGTTGACCAGGAGGTCCTGGTGGGCAGTTACATCC +
Preference number: 6 (lower is better)
Translates to: NGTRKSRETSSS*LTRRSWWAVTS
Trigger: GGATGTAACTGCCCACCAGGACCTCCTGGTCAACCAGGAACTAGAGGTTTCCCTGGATTTCCGGGTCCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520267.5
ENST00000673914.2
ENST00000674121.1
CDS CCA 72 bp CCATCCCTGCAGCTGCTCATGGTAGGGTCATCAGTCTaGAAGTCAGCTGCAGCTTTGGAAGGATCTGCATGC +
Preference number: 6 (lower is better)
Translates to: PSLQLLMVGSSV*KSAAALEGSAC
Trigger: GCATGCAGATCCTTCCAAAGCTGCAGCTGACTTCCAGACTGATGACCCTACCATGAGCAGCTGCAGGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 72 bp TTAGGTATCCAGGCAGGTAGGTGGTCAGCGTTGGCCTaGGGTCTTGGTGGTTTCACCACTTTTACCCAACCC +
Preference number: 6 (lower is better)
Translates to: LGIQAGRWSALA*GLGGFTTFTQP
Trigger: GGGTTGGGTAAAAGTGGTGAAACCACCAAGACCCCAGGCCAACGCTGACCACCTACCTGCCTGGATACCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS CAA 72 bp ATGTCCCCGTGCCTGTCTTCTCATCTTCTCGCCTGGTaGGCCCTTTACTCCCTAAGTCAGGAAATCCTCCCC +
Preference number: 6 (lower is better)
Translates to: MSPCLSSHLLAW*ALYSLSQEILP
Trigger: GGGGAGGATTTCCTGACTTAGGGAGTAAAGGGCCAACCAGGCGAGAAGATGAGAAGACAGGCACGGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484990.1
CDS CAA 72 bp TGGCCCTGGCAGCCCAGGAACCACTCCTTATTGTCTTaGATCCAGCGCTCTTGCAGTCACTTTTTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: WPWQPRNHSLLS*IQRSCSHFLQA
Trigger: GGCCTGCAAAAAGTGACTGCAAGAGCGCTGGATCAAAGACAATAAGGAGTGGTTCCTGGGCTGCCAGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 72 bp GGTGCTTTAGGTATCCAGGCAGGTAGGTGGTCAGCGTaGGCCTGGGGTCTTGGTGGTTTCACCACTTTTACC +
Preference number: 6 (lower is better)
Translates to: GALGIQAGRWSA*AWGLGGFTTFT
Trigger: GGTAAAAGTGGTGAAACCACCAAGACCCCAGGCCAACGCTGACCACCTACCTGCCTGGATACCTAAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS CAA 90 bp GGTTTGGCAGGACCAGCAGGGACAGGAAGCATGCTACCCGCCTGCTaGCTCTGCACTCTCCTTTTGTTGCCTATGCTCCTCCTAAAAAGT +
Preference number: 6 (lower is better)
Translates to: GLAGPAGTGSMLPAC*LCTLLLLPMLLLKS
Trigger: ACTTTTTAGGAGGAGCATAGGCAACAAAAGGAGAGTGCAGAGCAAGCAGGCGGGTAGCATGCTTCCTGTCCCTGCTGGTCCTGCCAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 90 bp GATGGAGGAGCTCAGGGCTGCCTCCTCTACAGAGGGTGGTGCCCATaGCAGCTTCTGTCTCTGATGAACACACACATCCTTTCATCCACA +
Preference number: 6 (lower is better)
Translates to: DGGAQGCLLYRGWCP*QLLSLMNTHILSST
Trigger: TGTGGATGAAAGGATGTGTGTGTTCATCAGAGACAGAAGCTGCAATGGGCACCACCCTCTGTAGAGGAGGCAGCCCTGAGCTCCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS GCA 72 bp GCAGGGACAGGAAGCATGCTACCCGCCTGCTTGCTCTaGACTCTCCTTTTGTTGCCTATGCTCCTCCTAAAA +
Preference number: 6 (lower is better)
Translates to: AGTGSMLPACLL*TLLLLPMLLLK
Trigger: TTTTAGGAGGAGCATAGGCAACAAAAGGAGAGTGCAGAGCAAGCAGGCGGGTAGCATGCTTCCTGTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp ATGCCTCAGAGCCAGATTTGTGGACTGAAACCCTTTTaGTTCACAACCAAGCTTGCCAAGGCGGTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: MPQSQICGLKPF*FTTKLAKAVAQ
Trigger: CTGGGCCACCGCCTTGGCAAGCTTGGTTGTGAAGCAAAAGGGTTTCAGTCCACAAATCTGGCTCTGAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS CCA 72 bp TTCTCCTTTCTCTCCTGTAAACCTCAGGAGCCCAGCTaGATTAGGCAATCCTGCCACTCTGGGTCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: FSFLSCKPQEPS*IRQSCHSGSAL
Trigger: CAGAGCAGACCCAGAGTGGCAGGATTGCCTAATCCAGCTGGGCTCCTGAGGTTTACAGGAGAGAAAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479733.5
CDS CCA 72 bp ACAATCAGGCCTGTTTCACTACATTCAGACGGGGCTTaGCAAGGTGAACCCACCCTGATGGGGACTGAGAAG +
Preference number: 6 (lower is better)
Translates to: TIRPVSLHSDGA*QGEPTLMGTEK
Trigger: CTTCTCAGTCCCCATCAGGGTGGGTTCACCTTGCCAAGCCCCGTCTGAATGTAGTGAAACAGGCCTGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp GGTGGAGCACAGACCACAAGCAACAGCAGTATGGAATaGTGTGTGATGATACGGGCCTCTAACAGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: GGAQTTSNSSME*CVMIRASNRSP
Trigger: TGGGGACCTGTTAGAGGCCCGTATCATCACACACCATTCCATACTGCTGTTGCTTGTGGTCTGTGCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 72 bp CCACATTCCCCTCGGTCATCTGATGTTTCCCCTCCTTaGATTTCATGGGACCGATTCACCCGTCCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: PHSPRSSDVSPP*ISWDRFTRPPL
Trigger: CAAAGGAGGACGGGTGAATCGGTCCCATGAAATCCAAGGAGGGGAAACATCAGATGACCGAGGGGAATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 90 bp AAGGCGGCCTCAGTTTCCTCCTCCATAAAACCTTGGCAAGGACAGTaGCTTGATGTGACCGCTAAGGGCCTTCCCAGCCTTCTCATTCTC +
Preference number: 6 (lower is better)
Translates to: KAASVSSSIKPWQGQ*LDVTAKGLPSLLIL
Trigger: GAGAATGAGAAGGCTGGGAAGGCCCTTAGCGGTCACATCAAGCAACTGTCCTTGCCAAGGTTTTATGGAGGAGGAAACTGAGGCCGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 90 bp CCTGGTAACGGTGCTGTGCTATTCACTGGGTGGAGTGAAAATGAGTaGTTACATACCCAGGGCTTAGTGCGGTGCTTGGCACGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: PGNGAVLFTGWSENE*LHTQGLVRCLARGK
Trigger: CTTCCCTCGTGCCAAGCACCGCACTAAGCCCTGGGTATGTAACAACTCATTTTCACTCCACCCAGTGAATAGCACAGCACCGTTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 90 bp ACTGGGCAGACAGGAGGTCCCTATTGTTTCCTGGACCTGTGGACTTaGTCGCTCCATCACAGTCTCCTTGGAGGGAACACAGTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: TGQTGGPYCFLDLWT*SLHHSLLGGNTVFG
Trigger: TCCAAAGACTGTGTTCCCTCCAAGGAGACTGTGATGGAGCGACAAAGTCCACAGGTCCAGGAAACAATAGGGACCTCCTGTCTGCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 90 bp CAGCTGCTCATGGTAGGGTCATCAGTCTGGAAGTCAGCTGCAGCTTaGGAAGGATCTGCATGCTGTAATTTGTCTGCCTGGGGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: QLLMVGSSVWKSAAA*EGSACCNLSAWGKG
Trigger: GCCTTTGCCCCAGGCAGACAAATTACAGCATGCAGATCCTTCCAAAGCTGCAGCTGACTTCCAGACTGATGACCCTACCATGAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS TCA 72 bp AGCACCTCCCCATGCCTCAGAGCCAGATTTGTGGACTaGAACCCTTTTGCTTCACAACCAAGCTTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: STSPCLRARFVD*NPFASQPSLPR
Trigger: CCTTGGCAAGCTTGGTTGTGAAGCAAAAGGGTTTCAGTCCACAAATCTGGCTCTGAGGCATGGGGAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673681.1
CDS TCA 72 bp ATGCAGATTGTGCTAGAGGAGATTCTGACTGGACAGTaGAGATGGAGGAGCTCAGGGCTGCCTCCTCTACAG +
Preference number: 6 (lower is better)
Translates to: MQIVLEEILTGQ*RWRSSGLPPLQ
Trigger: CTGTAGAGGAGGCAGCCCTGAGCTCCTCCATCTTCACTGTCCAGTCAGAATCTCCTCTAGCACAATCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS GCA 72 bp GTCTGGAAGTCAGCTGCAGCTTTGGAAGGATCTGCATaGTGTAATTTGTCTGCCTGGGGCAAAGGCACACCA +
Preference number: 6 (lower is better)
Translates to: VWKSAAALEGSA*CNLSAWGKGTP
Trigger: TGGTGTGCCTTTGCCCCAGGCAGACAAATTACAGCATGCAGATCCTTCCAAAGCTGCAGCTGACTTCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 72 bp GATGAGTATCAGAGGCAGCCAAAACCAACTTCAGGGTaGGAGAGCTGGCTGGCATCAAGTGGCTGTGCTTTA +
Preference number: 6 (lower is better)
Translates to: DEYQRQPKPTSG*ESWLASSGCAL
Trigger: TAAAGCACAGCCACTTGATGCCAGCCAGCTCTCCCACCCTGAAGTTGGTTTTGGCTGCCTCTGATACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp TTCCCTTCAGCTTCTTTTGCAGTAAGAGGATCAGCGTaGAGGCCTAGACTGTCCATGCCTAGAGAGGGACTG +
Preference number: 6 (lower is better)
Translates to: FPSASFAVRGSA*RPRLSMPREGL
Trigger: CAGTCCCTCTCTAGGCATGGACAGTCTAGGCCTCCACGCTGATCCTCTTACTGCAAAAGAAGCTGAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp CCTCATGAGTATTGCAGGATGGCCCTGACATGCCTTTaGCAAGAAGACAAGGGTTCCTGGCGAAGCCTTAGA +
Preference number: 6 (lower is better)
Translates to: PHEYCRMALTCL*QEDKGSWRSLR
Trigger: TCTAAGGCTTCGCCAGGAACCCTTGTCTTCTTGCCAAAGGCATGTCAGGGCCATCCTGCAATACTCATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CCA 72 bp TGCTCCTCAAGTCCCCAAGGTTTGTTACAGACAGGATaGGGACTGCTGGTCTCTGTTTCCCTTGAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: CSSSPQGLLQTG*GLLVSVSLESR
Trigger: TCTGCTCTCAAGGGAAACAGAGACCAGCAGTCCCCATCCTGTCTGTAACAAACCTTGGGGACTTGAGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp GCATCTTACCTGGGTCACTCCACATCTGAGGGCCCATaGTACACATACCCGGTACACATACCCACTACTCAA +
Preference number: 6 (lower is better)
Translates to: ASYLGHSTSEGP*YTYPVHIPTTQ
Trigger: TTGAGTAGTGGGTATGTGTACCGGGTATGTGTACCATGGGCCCTCAGATGTGGAGTGACCCAGGTAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 72 bp CTTTTTATGACCGGGGGTGGAGCCAGTCGCACTGAATaGAGGAGAGGCAGCAGCTTCAGGGCAATTATTTGG +
Preference number: 6 (lower is better)
Translates to: LFMTGGGASRTE*RRGSSFRAIIW
Trigger: CCAAATAATTGCCCTGAAGCTGCTGCCTCTCCTCAATTCAGTGCGACTGGCTCCACCCCCGGTCATAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398978.8
ENST00000479733.5
CDS CAA 72 bp AGCATGCTACCCGCCTGCTTGCTCTGCACTCTCCTTTaGTTGCCTATGCTCCTCCTAAAAAGTCCCTACTGC +
Preference number: 6 (lower is better)
Translates to: SMLPACLLCTLL*LPMLLLKSPYC
Trigger: GCAGTAGGGACTTTTTAGGAGGAGCATAGGCAACAAAAGGAGAGTGCAGAGCAAGCAGGCGGGTAGCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 72 bp ACAGGAGGTCCCTATTGTTTCCTGGACCTGTGGACTTaGTCGCTCCATCACAGTCTCCTTGGAGGGAACACA +
Preference number: 6 (lower is better)
Translates to: TGGPYCFLDLWT*SLHHSLLGGNT
Trigger: TGTGTTCCCTCCAAGGAGACTGTGATGGAGCGACAAAGTCCACAGGTCCAGGAAACAATAGGGACCTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 72 bp TCAGCTGCAGCTTTGGAAGGATCTGCATGCTGTAATTaGTCTGCCTGGGGCAAAGGCACACCAAGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: SAAALEGSACCN*SAWGKGTPRAV
Trigger: TACAGCCCTTGGTGTGCCTTTGCCCCAGGCAGACAAATTACAGCATGCAGATCCTTCCAAAGCTGCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 72 bp CCTTGGATTTCATGGGACCGATTCACCCGTCCTCCTTaGTGCTGGGGCTCTTACTGGGAGAGTTTCCATTTG +
Preference number: 6 (lower is better)
Translates to: PWISWDRFTRPP*CWGSYWESFHL
Trigger: CAAATGGAAACTCTCCCAGTAAGAGCCCCAGCACAAAGGAGGACGGGTGAATCGGTCCCATGAAATCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 90 bp GCCACACGCATTTTGGCAGCTGATCAGGATGTGGCCCACCCACGCTaGTCTATTTCTTTTCTCTACTACAGGTCAGAACCTCAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: ATRILAADQDVAHPR*SISFLYYRSEPQKE
Trigger: CTCCTTCTGAGGTTCTGACCTGTAGTAGAGAAAAGAAATAGACAAGCGTGGGTGGGCCACATCCTGATCAGCTGCCAAAATGCGTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 90 bp GTCTGGAAGTCAGCTGCAGCTTTGGAAGGATCTGCATGCTGTAATTaGTCTGCCTGGGGCAAAGGCACACCAAGGGCTGTAGCTAAAGAT +
Preference number: 6 (lower is better)
Translates to: VWKSAAALEGSACCN*SAWGKGTPRAVAKD
Trigger: ATCTTTAGCTACAGCCCTTGGTGTGCCTTTGCCCCAGGCAGACAAATTACAGCATGCAGATCCTTCCAAAGCTGCAGCTGACTTCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS TCA 72 bp ACAGACAGGATGGGGACTGCTGGTCTCTGTTTCCCTTaGGAGCAGATGCAGATTGTGCTAGAGGAGATTCTG +
Preference number: 6 (lower is better)
Translates to: TDRMGTAGLCFP*EQMQIVLEEIL
Trigger: CAGAATCTCCTCTAGCACAATCTGCATCTGCTCTCAAGGGAAACAGAGACCAGCAGTCCCCATCCTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS TCA 72 bp GTGACTCTGCTGCCACTGGAACAGGACTGGATTCGTTaGGCACAGATTCTTGAACATGTTGGAGTCTCCGGT +
Preference number: 6 (lower is better)
Translates to: VTLLPLEQDWIR*AQILEHVGVSG
Trigger: ACCGGAGACTCCAACATGTTCAAGAATCTGTGCTCAACGAATCCAGTCCTGTTCCAGTGGCAGCAGAGTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS GCA 72 bp CTGGCTGGCATCAAGTGGCTGTGCTTTAGAGGTAGCTaGAGCAGGAAGCCAGGAAACATCCCAGTAAACTTT +
Preference number: 6 (lower is better)
Translates to: LAGIKWLCFRGS*SRKPGNIPVNF
Trigger: AAAGTTTACTGGGATGTTTCCTGGCTTCCTGCTGCAGCTACCTCTAAAGCACAGCCACTTGATGCCAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp TGGATTTCATGGGACCGATTCACCCGTCCTCCTTTGTaGTGGGGCTCTTACTGGGAGAGTTTCCATTTGCAA +
Preference number: 6 (lower is better)
Translates to: WISWDRFTRPPL*WGSYWESFHLQ
Trigger: TTGCAAATGGAAACTCTCCCAGTAAGAGCCCCAGCACAAAGGAGGACGGGTGAATCGGTCCCATGAAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 72 bp GTAGACGGGGCTGGAATTTGGGAAAATGCTTTAGCTTaGATGACTGAGGAAGGCCTTTCTGAGGAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: VDGAGIWENALA*MTEEGLSEEVV
Trigger: CACCACCTCCTCAGAAAGGCCTTCCTCAGTCATCCAAGCTAAAGCATTTTCCCAAATTCCAGCCCCGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673927.1
CDS CCA 72 bp GGACCTGTGGACTTTGTCGCTCCATCACAGTCTCCTTaGAGGGAACACAGTCTTTGGAAACTCTGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: GPVDFVAPSQSP*REHSLWKLCLL
Trigger: AAGAAGGCAGAGTTTCCAAAGACTGTGTTCCCTCCAAGGAGACTGTGATGGAGCGACAAAGTCCACAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp ATTTCATGGGACCGATTCACCCGTCCTCCTTTGTGCTaGGGCTCTTACTGGGAGAGTTTCCATTTGCAAGTC +
Preference number: 6 (lower is better)
Translates to: ISWDRFTRPPLC*GSYWESFHLQV
Trigger: GACTTGCAAATGGAAACTCTCCCAGTAAGAGCCCCAGCACAAAGGAGGACGGGTGAATCGGTCCCATGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CCA 72 bp TGGTCACTAGAGGGCACTCTCTTTCTCTGCTGCCTTTaGAGGCCTGATTGTTGTAACCACTGCATTGTCCCA +
Preference number: 6 (lower is better)
Translates to: WSLEGTLFLCCL*RPDCCNHCIVP
Trigger: TGGGACAATGCAGTGGTTACAACAATCAGGCCTCCAAAGGCAGCAGAGAAAGAGAGTGCCCTCTAGTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS CCA 72 bp GTCTCTGTCAAATTATCTCTCATGTACCTCTGCTCCTaGATTGCCCTTCTCCCCGGCTTCTCCTTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: VSVKLSLMYLCS*IALLPGFSFLS
Trigger: GGAGAGAAAGGAGAAGCCGGGGAGAAGGGCAATCCAGGAGCAGAGGTACATGAGAGATAATTTGACAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684387.1
CDS CAA 72 bp CCGCTAAGGGCCTTCCCAGCCTTCTCATTCTCTTATTaGTCTCTCTTCCTAAGCACAGGGAGGAGGACATGT +
Preference number: 6 (lower is better)
Translates to: PLRAFPAFSFSY*SLFLSTGRRTC
Trigger: ACATGTCCTCCTCCCTGTGCTTAGGAAGAGAGACAAATAAGAGAATGAGAAGGCTGGGAAGGCCCTTAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 72 bp TCAGTTTCCTCCTCCATAAAACCTTGGCAAGGACAGTaGCTTGATGTGACCGCTAAGGGCCTTCCCAGCCTT +
Preference number: 6 (lower is better)
Translates to: SVSSSIKPWQGQ*LDVTAKGLPSL
Trigger: AAGGCTGGGAAGGCCCTTAGCGGTCACATCAAGCAACTGTCCTTGCCAAGGTTTTATGGAGGAGGAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 72 bp GGTGCTGTGCTATTCACTGGGTGGAGTGAAAATGAGTaGTTACATACCCAGGGCTTAGTGCGGTGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: GAVLFTGWSENE*LHTQGLVRCLA
Trigger: TGCCAAGCACCGCACTAAGCCCTGGGTATGTAACAACTCATTTTCACTCCACCCAGTGAATAGCACAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 72 bp TGGACCTGTGGACTTTGTCGCTCCATCACAGTCTCCTaGGAGGGAACACAGTCTTTGGAAACTCTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: WTCGLCRSITVS*EGTQSLETLPS
Trigger: AGAAGGCAGAGTTTCCAAAGACTGTGTTCCCTCCAAGGAGACTGTGATGGAGCGACAAAGTCCACAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 72 bp ATCTGGAATGTGGGGAGACTGAGCTGTTCCTGGAGATaGCTCCTCAAGTCCCCAAGGTTTGTTACAGACAGG +
Preference number: 6 (lower is better)
Translates to: IWNVGRLSCSWR*LLKSPRFVTDR
Trigger: CCTGTCTGTAACAAACCTTGGGGACTTGAGGAGCAATCTCCAGGAACAGCTCAGTCTCCCCACATTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 72 bp AAGCTCTCTGGTTGCTTCTCCAAGACATTGCAGCTCTaGGTAGTGGCTGTTCTTCCCCTGCTAAGCACAACC +
Preference number: 6 (lower is better)
Translates to: KLSGCFSKTLQL*VVAVLPLLSTT
Trigger: GGTTGTGCTTAGCAGGGGAAGAACAGCCACTACCAAGAGCTGCAATGTCTTGGAGAAGCAACCAGAGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS CAA 90 bp CACTTTCCTAGCTGGTATCTGGTGGCAGCTTTGTCTAGAATCAGCTaGGAGATGAGTATCAGAGGCAGCCAAAACCAACTTCAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: HFPSWYLVAALSRIS*EMSIRGSQNQLQGG
Trigger: CCCACCCTGAAGTTGGTTTTGGCTGCCTCTGATACTCATCTCCAAGCTGATTCTAGACAAAGCTGCCACCAGATACCAGCTAGGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 90 bp AAGAAGACAAGGGTTCCTGGCGAAGCCTTAGACCTTGCTGGGAATTaGGGGGTGAAGTGCAGTAAAAACATGGGAATCAACTGCACACCG +
Preference number: 6 (lower is better)
Translates to: KKTRVPGEALDLAGN*GVKCSKNMGINCTP
Trigger: CGGTGTGCAGTTGATTCCCATGTTTTTACTGCACTTCACCCCCAAATTCCCAGCAAGGTCTAAGGCTTCGCCAGGAACCCTTGTCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp GGTCAAGGGTTCAGAGGTCTTATGACACCTCTGACCTaGTTTTGTGGCGCTTTAACTAGGTCTAAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: GQGFRGLMTPLT*FCGALTRSKWS
Trigger: GCTCCACTTAGACCTAGTTAAAGCGCCACAAAAGCAGGTCAGAGGTGTCATAAGACCTCTGAACCCTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS GCA 72 bp CCTTTGTGGTCACTAGAGGGCACTCTCTTTCTCTGCTaGCTTTGGAGGCCTGATTGTTGTAACCACTGCATT +
Preference number: 6 (lower is better)
Translates to: PLWSLEGTLFLC*LWRPDCCNHCI
Trigger: AATGCAGTGGTTACAACAATCAGGCCTCCAAAGGCAGCAGAGAAAGAGAGTGCCCTCTAGTGACCACAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS CCA 72 bp GCTTTGGAAGGATCTGCATGCTGTAATTTGTCTGCCTaGGGCAAAGGCACACCAAGGGCTGTAGCTAAAGAT +
Preference number: 6 (lower is better)
Translates to: ALEGSACCNLSA*GKGTPRAVAKD
Trigger: ATCTTTAGCTACAGCCCTTGGTGTGCCTTTGCCCCAGGCAGACAAATTACAGCATGCAGATCCTTCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 72 bp AGGGTTCCTGGCGAAGCCTTAGACCTTGCTGGGAATTaGGGGGTGAAGTGCAGTAAAAACATGGGAATCAAC +
Preference number: 6 (lower is better)
Translates to: RVPGEALDLAGN*GVKCSKNMGIN
Trigger: GTTGATTCCCATGTTTTTACTGCACTTCACCCCCAAATTCCCAGCAAGGTCTAAGGCTTCGCCAGGAACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 72 bp TACAGACAGGATGGGGACTGCTGGTCTCTGTTTCCCTaGAGAGCAGATGCAGATTGTGCTAGAGGAGATTCT +
Preference number: 6 (lower is better)
Translates to: YRQDGDCWSLFP*RADADCARGDS
Trigger: AGAATCTCCTCTAGCACAATCTGCATCTGCTCTCAAGGGAAACAGAGACCAGCAGTCCCCATCCTGTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 72 bp CAGGAACCACTCCTTATTGTCTTTGATCCAGCGCTCTaGCAGTCACTTTTTGCAGGCCTGACCCTTGTAGAC +
Preference number: 6 (lower is better)
Translates to: QEPLLIVFDPAL*QSLFAGLTLVD
Trigger: GTCTACAAGGGTCAGGCCTGCAAAAAGTGACTGCAAGAGCGCTGGATCAAAGACAATAAGGAGTGGTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 72 bp ATGGTAGGGTCATCAGTCTGGAAGTCAGCTGCAGCTTaGGAAGGATCTGCATGCTGTAATTTGTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: MVGSSVWKSAAA*EGSACCNLSAW
Trigger: CCAGGCAGACAAATTACAGCATGCAGATCCTTCCAAAGCTGCAGCTGACTTCCAGACTGATGACCCTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 90 bp CCAGTCCAGAGAATCCACTTTCCTAGCTGGTATCTGGTGGCAGCTTaGTCTAGAATCAGCTTGGAGATGAGTATCAGAGGCAGCCAAAAC +
Preference number: 6 (lower is better)
Translates to: PVQRIHFPSWYLVAA*SRISLEMSIRGSQN
Trigger: GTTTTGGCTGCCTCTGATACTCATCTCCAAGCTGATTCTAGACAAAGCTGCCACCAGATACCAGCTAGGAAAGTGGATTCTCTGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 90 bp AAGGTTTGTTACAGACAGGATGGGGACTGCTGGTCTCTGTTTCCCTaGAGAGCAGATGCAGATTGTGCTAGAGGAGATTCTGACTGGACA +
Preference number: 6 (lower is better)
Translates to: KVCYRQDGDCWSLFP*RADADCARGDSDWT
Trigger: TGTCCAGTCAGAATCTCCTCTAGCACAATCTGCATCTGCTCTCAAGGGAAACAGAGACCAGCAGTCCCCATCCTGTCTGTAACAAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 90 bp ATGGGTGTGGAATGGCCAGGGACTGGAAACTATGTGCAGCAGCCCTaGCTCTGTCAATTGCCCCCTAAATGCTTTTTAAAGGTGGATGTT +
Preference number: 6 (lower is better)
Translates to: MGVEWPGTGNYVQQP*LCQLPPKCFLKVDV
Trigger: AACATCCACCTTTAAAAAGCATTTAGGGGGCAATTGACAGAGCAAGGGCTGCTGCACATAGTTTCCAGTCCCTGGCCATTCCACACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 90 bp GTAGTCTTGAAGCTCTCTGGTTGCTTCTCCAAGACATTGCAGCTCTaGGTAGTGGCTGTTCTTCCCCTGCTAAGCACAACCATTTCTGTC +
Preference number: 6 (lower is better)
Translates to: VVLKLSGCFSKTLQL*VVAVLPLLSTTISV
Trigger: GACAGAAATGGTTGTGCTTAGCAGGGGAAGAACAGCCACTACCAAGAGCTGCAATGTCTTGGAGAAGCAACCAGAGAGCTTCAAGACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS TCA 72 bp AAGAAACAAAGTCTGCCCACATTCCCCTCGGTCATCTaGTGTTTCCCCTCCTTGGATTTCATGGGACCGATT +
Preference number: 6 (lower is better)
Translates to: KKQSLPTFPSVI*CFPSLDFMGPI
Trigger: AATCGGTCCCATGAAATCCAAGGAGGGGAAACATCAGATGACCGAGGGGAATGTGGGCAGACTTTGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS GCA 72 bp TTGGGGGTGAAGTGCAGTAAAAACATGGGAATCAACTaGACACCGTCGGTCTCCTTTGTTGGTAGCAACCAT +
Preference number: 6 (lower is better)
Translates to: LGVKCSKNMGIN*TPSVSFVGSNH
Trigger: ATGGTTGCTACCAACAAAGGAGACCGACGGTGTGCAGTTGATTCCCATGTTTTTACTGCACTTCACCCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS GCA 72 bp ACCCAGGGCTTAGTGCGGTGCTTGGCACGAGGGAAGTaGTCAGACGTGGTGACTATTATTACTATTAGTATT +
Preference number: 6 (lower is better)
Translates to: TQGLVRCLARGK*SDVVTIITISI
Trigger: AATACTAATAGTAATAATAGTCACCACGTCTGAGCACTTCCCTCGTGCCAAGCACCGCACTAAGCCCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp ATGCCTCTATCTGGAAAGCCTACCTCTGAAACTTTGTaGCAAACTCCTACAAAGCCGTCAAGACTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: MPLSGKPTSETL*QTPTKPSRLCP
Trigger: TGGGCAGAGTCTTGACGGCTTTGTAGGAGTTTGCCACAAAGTTTCAGAGGTAGGCTTTCCAGATAGAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp CAGCTTCCTGGTAACGGTGCTGTGCTATTCACTGGGTaGAGTGAAAATGAGTTGTTACATACCCAGGGCTTA +
Preference number: 6 (lower is better)
Translates to: QLPGNGAVLFTG*SENELLHTQGL
Trigger: TAAGCCCTGGGTATGTAACAACTCATTTTCACTCCACCCAGTGAATAGCACAGCACCGTTACCAGGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp TTGGTTATCTGGAATGTGGGGAGACTGAGCTGTTCCTaGAGATTGCTCCTCAAGTCCCCAAGGTTTGTTACA +
Preference number: 6 (lower is better)
Translates to: LVIWNVGRLSCS*RLLLKSPRFVT
Trigger: TGTAACAAACCTTGGGGACTTGAGGAGCAATCTCCAGGAACAGCTCAGTCTCCCCACATTCCAGATAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS TCA 72 bp ACTGGAACAGGACTGGATTCGTTGAGCACAGATTCTTaGACATGTTGGAGTCTCCGGTCCCTTTATGAGGAT +
Preference number: 6 (lower is better)
Translates to: TGTGLDSLSTDS*TCWSLRSLYED
Trigger: ATCCTCATAAAGGGACCGGAGACTCCAACATGTTCAAGAATCTGTGCTCAACGAATCCAGTCCTGTTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS TCA 72 bp CCACTGCATTGTCCCAGATTGGACTTAAGGTGTGAATaGGTAGTCTTGAAGCTCTCTGGTTGCTTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: PLHCPRLDLRCE*VVLKLSGCFSK
Trigger: CTTGGAGAAGCAACCAGAGAGCTTCAAGACTACTCATTCACACCTTAAGTCCAATCTGGGACAATGCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS GCA 72 bp ACTTTGTGGCAAACTCCTACAAAGCCGTCAAGACTCTaGCCAAATAGAAAGTCTTTTGGGATGCTTGCCCGA +
Preference number: 6 (lower is better)
Translates to: TLWQTPTKPSRL*PNRKSFGMLAR
Trigger: TCGGGCAAGCATCCCAAAAGACTTTCTATTTGGGCAGAGTCTTGACGGCTTTGTAGGAGTTTGCCACAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS GCA 72 bp TATATGTTCGCCACCAGCTTCCTGGTAACGGTGCTGTaGTATTCACTGGGTGGAGTGAAAATGAGTTGTTAC +
Preference number: 6 (lower is better)
Translates to: YMFATSFLVTVL*YSLGGVKMSCY
Trigger: GTAACAACTCATTTTCACTCCACCCAGTGAATAGCACAGCACCGTTACCAGGAAGCTGGTGGCGAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 72 bp AGCTGGTATCTGGTGGCAGCTTTGTCTAGAATCAGCTaGGAGATGAGTATCAGAGGCAGCCAAAACCAACTT +
Preference number: 6 (lower is better)
Translates to: SWYLVAALSRIS*EMSIRGSQNQL
Trigger: AAGTTGGTTTTGGCTGCCTCTGATACTCATCTCCAAGCTGATTCTAGACAAAGCTGCCACCAGATACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 72 bp AGAATCCACTTTCCTAGCTGGTATCTGGTGGCAGCTTaGTCTAGAATCAGCTTGGAGATGAGTATCAGAGGC +
Preference number: 6 (lower is better)
Translates to: RIHFPSWYLVAA*SRISLEMSIRG
Trigger: GCCTCTGATACTCATCTCCAAGCTGATTCTAGACAAAGCTGCCACCAGATACCAGCTAGGAAAGTGGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 72 bp ATTTTGGCAGCTGATCAGGATGTGGCCCACCCACGCTaGTCTATTTCTTTTCTCTACTACAGGTCAGAACCT +
Preference number: 6 (lower is better)
Translates to: ILAADQDVAHPR*SISFLYYRSEP
Trigger: AGGTTCTGACCTGTAGTAGAGAAAAGAAATAGACAAGCGTGGGTGGGCCACATCCTGATCAGCTGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 72 bp TTTGAGTTTGAGACCCTTGGCTTAGAGAAGCAGAGATaGGTTATCTGGAATGTGGGGAGACTGAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: FEFETLGLEKQR*VIWNVGRLSCS
Trigger: GGAACAGCTCAGTCTCCCCACATTCCAGATAACCAATCTCTGCTTCTCTAAGCCAAGGGTCTCAAACTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CAA 90 bp TGGCCAGGGACTGGAAACTATGTGCAGCAGCCCTTGCTCTGTCAATaGCCCCCTAAATGCTTTTTAAAGGTGGATGTTGTAAGAAAGAAA +
Preference number: 6 (lower is better)
Translates to: WPGTGNYVQQPLLCQ*PPKCFLKVDVVRKK
Trigger: TTTCTTTCTTACAACATCCACCTTTAAAAAGCATTTAGGGGGCAATTGACAGAGCAAGGGCTGCTGCACATAGTTTCCAGTCCCTGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS TCA 72 bp GTAACCACTGCATTGTCCCAGATTGGACTTAAGGTGTaGATGAGTAGTCTTGAAGCTCTCTGGTTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: VTTALSQIGLKV*MSSLEALWLLL
Trigger: GAGAAGCAACCAGAGAGCTTCAAGACTACTCATTCACACCTTAAGTCCAATCTGGGACAATGCAGTGGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682574.1
CDS GCA 72 bp CTTTGTGCTGGGGCTCTTACTGGGAGAGTTTCCATTTaGAAGTCTGAACATTCCCCCACATGCATTTCATTA +
Preference number: 6 (lower is better)
Translates to: LCAGALTGRVSI*KSEHSPTCISL
Trigger: TAATGAAATGCATGTGGGGGAATGTTCAGACTTGCAAATGGAAACTCTCCCAGTAAGAGCCCCAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 72 bp ATAATGCCTCTATCTGGAAAGCCTACCTCTGAAACTTaGTGGCAAACTCCTACAAAGCCGTCAAGACTCTGC +
Preference number: 6 (lower is better)
Translates to: IMPLSGKPTSET*WQTPTKPSRLC
Trigger: GCAGAGTCTTGACGGCTTTGTAGGAGTTTGCCACAAAGTTTCAGAGGTAGGCTTTCCAGATAGAGGCATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS GCA 72 bp CAAATCCGGCTATTTTACCATTGGTTAAAGGTCACATaGAGCTATAGTGCAACGTCAATAGGGGCTGTCCTA +
Preference number: 6 (lower is better)
Translates to: QIRLFYHWLKVT*SYSATSIGAVL
Trigger: TAGGACAGCCCCTATTGACGTTGCACTATAGCTGCATGTGACCTTTAACCAATGGTAAAATAGCCGGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS CAA 72 bp ACTGGAAACTATGTGCAGCAGCCCTTGCTCTGTCAATaGCCCCCTAAATGCTTTTTAAAGGTGGATGTTGTA +
Preference number: 6 (lower is better)
Translates to: TGNYVQQPLLCQ*PPKCFLKVDVV
Trigger: TACAACATCCACCTTTAAAAAGCATTTAGGGGGCAATTGACAGAGCAAGGGCTGCTGCACATAGTTTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 90 bp CTCAAAAGAATAATGCCTCTATCTGGAAAGCCTACCTCTGAAACTTaGTGGCAAACTCCTACAAAGCCGTCAAGACTCTGCCCAAATAGA +
Preference number: 6 (lower is better)
Translates to: LKRIMPLSGKPTSET*WQTPTKPSRLCPNR
Trigger: TCTATTTGGGCAGAGTCTTGACGGCTTTGTAGGAGTTTGCCACAAAGTTTCAGAGGTAGGCTTTCCAGATAGAGGCATTATTCTTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS TCA 72 bp AATTGGGACGTGGTAATTGAGAGAAAACAAAGTTTTTaGGTCCGCTCTCTTATCAGCAGGCATAGGAGGAAC +
Preference number: 6 (lower is better)
Translates to: NWDVVIERKQSF*VRSLISRHRRN
Trigger: GTTCCTCCTATGCCTGCTGATAAGAGAGCGGACTCAAAAACTTTGTTTTCTCTCAATTACCACGTCCCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS CAA 72 bp AGGAGGCTATCCATTTCGAAACAAGTACCATACACATaGTACAATCAGGCCTGTTTCACTACATTCAGACGG +
Preference number: 6 (lower is better)
Translates to: RRLSISKQVPYT*YNQACFTTFRR
Trigger: CCGTCTGAATGTAGTGAAACAGGCCTGATTGTACAATGTGTATGGTACTTGTTTCGAAATGGATAGCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673736.2
CDS CCA 72 bp CTTTTCTCTACTACAGGTCAGAACCTCAGAAGGAGGTaGAAACAAATCCGGCTATTTTACCATTGGTTAAAG +
Preference number: 6 (lower is better)
Translates to: LFSTTGQNLRRR*KQIRLFYHWLK
Trigger: CTTTAACCAATGGTAAAATAGCCGGATTTGTTTCCACCTCCTTCTGAGGTTCTGACCTGTAGTAGAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478219.2
CDS TCA 72 bp ACCCATTTCACTGAGGTATTGAACAAGCTGAATGTGTaGAACATGATAAATGCAGTACCTGGCTCTTCTTAC +
Preference number: 6 (lower is better)
Translates to: THFTEVLNKLNV*NMINAVPGSSY
Trigger: GTAAGAAGAGCCAGGTACTGCATTTATCATGTTTCACACATTCAGCTTGTTCAATACCTCAGTGAAATGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673830.1
CDS TCA 72 bp GAAGCTTGGACAGATGGACAAACTATTTTACCTTCCTaGCTCTCATGTATAAAACAGGTTTATAATCATACC +
Preference number: 6 (lower is better)
Translates to: EAWTDGQTILPS*LSCIKQVYNHT
Trigger: GGTATGATTATAAACCTGTTTTATACATGAGAGTCAGGAAGGTAAAATAGTTTGTCCATCTGTCCAAGCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673830.1