RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL12A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111799

Ensembl transcript IDs: ENST00000322507.13, ENST00000345356.10, ENST00000416123.6, ENST00000419671.1, ENST00000425443.6, ENST00000474564.1, ENST00000483888.6, ENST00000486533.1, ENST00000493109.2, ENST00000511023.1, ENST00000680102.1, ENST00000680981.1, ENST00000681086.1

Found 1457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGGGCGCGCCGCCAGCGCCGGTGGGGCTCAGGAGGCTCCTCTaGAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTC +
Preference number: 1 (lower is better)
Translates to: GQGAPPAPVGLRRLL*RLVCAVVLVFRCPL
Trigger: GAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTGCAGAGGAGCCTCCTGAGCCCCACCGGCGCTGGCGGCGCGCCCTGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR GCA 90 bp CCGCCAGCGCCGGTGGGGCTCAGGAGGCTCCTCTGCAGGCTCGTCTaGGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGG +
Preference number: 1 (lower is better)
Translates to: PPAPVGLRRLLCRLV*AVVLVFRCPLGLHR
Trigger: CCGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTGCAGAGGAGCCTCCTGAGCCCCACCGGCGCTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR CCA 90 bp AATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTaGTTCACTGCCCGGGTCCGTGGGGCAGGGCGCGCCGCCAGCGCC +
Preference number: 1 (lower is better)
Translates to: NFNTSPKPRGAARDL*FTARVRGAGRAASA
Trigger: GGCGCTGGCGGCGCGCCCTGCCCCACGGACCCGGGCAGTGAACCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 90 bp CGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATaGAGGGCTCGCGCTCAGGCAGGTAGGCCCCGCCCTCGGGCACGT +
Preference number: 1 (lower is better)
Translates to: RSPRIPLSARAPPAR*RARAQAGRPRPRAR
Trigger: ACGTGCCCGAGGGCGGGGCCTACCTGCCTGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 90 bp CAACGCTGGAAGAAACACCTCAGAAAAGACGTACACTGCTCTATCTaGCCTGTAAATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGC +
Preference number: 1 (lower is better)
Translates to: QRWKKHLRKDVHCSI*PVNENFNTSPKPRG
Trigger: GCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATTTACAGGTCAGATAGAGCAGTGTACGTCTTTTCTGAGGTGTTTCTTCCAGCGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR CCA 90 bp CGCCCTCGGGCACGTAAGGCTCTGTCCGATTCAACATTACAATTATaGCATGATTTGGAAGGCACACACACACACACACAGCAAAAGCTA +
Preference number: 1 (lower is better)
Translates to: RPRARKALSDSTLQL*HDLEGTHTHTQQKL
Trigger: TAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGCCTTACGTGCCCGAGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 90 bp CCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATaGGCAACGCTGGAAGAAACACCTCAGAAAAGACGTACACTGCTC +
Preference number: 1 (lower is better)
Translates to: PAETRFSTIRKGTPG*ATLEETPQKRRTLL
Trigger: GAGCAGTGTACGTCTTTTCTGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR CCA 90 bp GACATCTTCTGTGGCTGTACCTCACACAAACTGAGTTACAGCTGGTaGGTGAGGAACACCAGTGACTACAGCAAAACAGGAAGAAAAGGT +
Preference number: 1 (lower is better)
Translates to: DIFCGCTSHKLSYSW*VRNTSDYSKTGRKG
Trigger: ACCTTTTCTTCCTGTTTTGCTGTAGTCACTGGTGTTCCTCACCCACCAGCTGTAACTCAGTTTGTGTGAGGTACAGCCACAGAAGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 90 bp AAAGACAGATGCCCTGAATCAGACACATCGCTAACAAGCAAGAGATaGGGAGATTCCATTTGGTGTTATTCCGGCATAGAGCAAGCGGCA +
Preference number: 1 (lower is better)
Translates to: KDRCPESDTSLTSKR*GDSIWCYSGIEQAA
Trigger: TGCCGCTTGCTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCTGATTCAGGGCATCTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR CCA 90 bp CATGACATCTTCTGTGGCTGTACCTCACACAAACTGAGTTACAGCTaGTGGGTGAGGAACACCAGTGACTACAGCAAAACAGGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: HDIFCGCTSHKLSYS*WVRNTSDYSKTGRK
Trigger: TTTTCTTCCTGTTTTGCTGTAGTCACTGGTGTTCCTCACCCACCAGCTGTAACTCAGTTTGTGTGAGGTACAGCCACAGAAGATGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR CCA 90 bp GCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTaGATGAGCAACGCTGGAAGAAACACCTCAGAAAAGACGTACACT +
Preference number: 1 (lower is better)
Translates to: ASCRNKVLYNQKGYS*MSNAGRNTSEKTYT
Trigger: AGTGTACGTCTTTTCTGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR TCA 90 bp CCCTCCTTTGTGATGTCGACCCGGTTCGTTAACCATTATCTGTGGTaGGATTTCCATACAGACTCATTTCCTAATAAGCACGTGCGCAAA +
Preference number: 1 (lower is better)
Translates to: PSFVMSTRFVNHYLW*DFHTDSFPNKHVRK
Trigger: TTTGCGCACGTGCTTATTAGGAAATGAGTCTGTATGGAAATCTCACCACAGATAATGGTTAACGAACCGGGTCGACATCACAAAGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 90 bp TTTTGTCTCATTCAAGTTAGTAAAAAGAGTCTCCACCCTCCTTTGTaGTGTCGACCCGGTTCGTTAACCATTATCTGTGGTGAGATTTCC +
Preference number: 1 (lower is better)
Translates to: FCLIQVSKKSLHPPL*CRPGSLTIICGEIS
Trigger: GGAAATCTCACCACAGATAATGGTTAACGAACCGGGTCGACATCACAAAGGAGGGTGGAGACTCTTTTTACTAACTTGAATGAGACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 90 bp GTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGATaGGGAGGTGAGGGGAAGTTTCATTGGCTCCTAGAAACTGAACTC +
Preference number: 1 (lower is better)
Translates to: VYAFKLLNSKNNLER*GGEGKFHWLLETEL
Trigger: GAGTTCAGTTTCTAGGAGCCAATGAAACTTCCCCTCACCTCCTCATCTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR CCA 90 bp AACCTTCAAAAATCCAGCAGTAAACACAATCATTGCACAAATACTTaGGAAGGGTCAGAGACTGGGCCAAAGAACTGTAAACGCAGTAAC +
Preference number: 1 (lower is better)
Translates to: NLQKSSSKHNHCTNT*EGSETGPKNCKRSN
Trigger: GTTACTGCGTTTACAGTTCTTTGGCCCAGTCTCTGACCCTTCCCAAGTATTTGTGCAATGATTGTGTTTACTGCTGGATTTTTGAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR GCA 90 bp ATCTGTGGTGAGATTTCCATACAGACTCATTTCCTAATAAGCACGTaGGCAAACATCTCAGAAACAGGATTTTCATGTATTCAAACTGTA +
Preference number: 1 (lower is better)
Translates to: ICGEISIQTHFLIST*ANISETGFSCIQTV
Trigger: TACAGTTTGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAATGAGTCTGTATGGAAATCTCACCACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR TCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCTCCACCCTCCTTTGTaGTGTCGACCCGGTTCGTTA +
Preference number: 2 (lower is better)
Translates to: QARLRRSPRIPLSARAPPLHPPL*CRPGSL
Trigger: TAACGAACCGGGTCGACATCACAAAGGAGGGTGGAG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR TCA 90 bp TCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATGAAGGGCTCGCGCTCAAAAAGACAGATGCCCTaGATCAGACACATCGCTAAC +
Preference number: 2 (lower is better)
Translates to: SYSAVRSGSTGTMKGSRSKRQMP*IRHIAN
Trigger: GTTAGCGATGTGTCTGATTCAGGGCATCTGTCTTTT...TGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR TCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGGTAATATACAGTACATaGCATCTTCTGTGGCTGTAC +
Preference number: 2 (lower is better)
Translates to: QARLRRSPRIPLSARAPPVIYST*HLLWLY
Trigger: GTACAGCCACAGAAGATGTCATGTACTGTATATTAC...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGGTTACAGCTGGTGGGTaGGGAACACCAGTGACTACA +
Preference number: 2 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVVTAGG*GTPVTT
Trigger: TGTAGTCACTGGTGTTCCTCACCCACCAGCTGTAAC...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR CCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGCATTGCACAAATACTTaGGAAGGGTCAGAGACTGGG +
Preference number: 2 (lower is better)
Translates to: CVLGARLPAETRFSTIRKHCTNT*EGSETG
Trigger: CCCAGTCTCTGACCCTTCCCAAGTATTTGTGCAATG...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR TCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGATATCTGACCTGTAAATaGGAATTTCAACACCTCCCC +
Preference number: 2 (lower is better)
Translates to: DCVLGARLPAETRFSTIRYLTCK*EFQHLP
Trigger: GGGGAGGTGTTGAAATTCTCATTTACAGGTCAGATA...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR CAA 90 bp AGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTCTCTCTTaGCAGCTTTTGTTAACAAAGTATTTTGCAAGCATTTCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: RLPAVLTKGTRHVLS*QLLLTKYFASISRA
Trigger: TGCCCTTGAAATGCTTGCAAAATACTTTGTTAACAAAAGCTGCAAAGAGAGAACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGGTGAGGAACACCAGTaGCTACAGCAAAACAGGAAG +
Preference number: 2 (lower is better)
Translates to: KISIAKDKLPARNTQQLWGEEHQ*LQQNRK
Trigger: CTTCCTGTTTTGCTGTAGTCACTGGTGTTCCTCACC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR TCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGATTACAATTATGGCATaGTTTGGAAGGCACACACAC +
Preference number: 2 (lower is better)
Translates to: CVLGARLPAETRFSTIRKITIMA*FGRHTH
Trigger: GTGTGTGTGCCTTCCAAATCATGCCATAATTGTAAT...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR TCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTATATCTGACCTGTAAATaGGAATTTCAACACCTCCCC +
Preference number: 2 (lower is better)
Translates to: CLELGFLQKQGSLQSERVYLTCK*EFQHLP
Trigger: GGGGAGGTGTTGAAATTCTCATTTACAGGTCAGATA...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR CAA 90 bp GCACGTAAGGCTCTGTCCGATTCAACATTACAATTATGGCATGATTaGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCAC +
Preference number: 2 (lower is better)
Translates to: ARKALSDSTLQLWHD*EGTHTHTQQKLNHH
Trigger: GTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGCCTTACGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR TCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGTACACTGCTCTATCTaGCCTGTAAATGAGAATTTC +
Preference number: 2 (lower is better)
Translates to: CLELGFLQKQGSLQSERVVHCSI*PVNENF
Trigger: GAAATTCTCATTTACAGGTCAGATAGAGCAGTGTAC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR-3UTR CCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGCTGAGTTACAGCTGGTaGGTGAGGAACACCAGTGAC +
Preference number: 2 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKLSYSW*VRNTSD
Trigger: GTCACTGGTGTTCCTCACCCACCAGCTGTAACTCAG...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR CCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGAAACTGAGTTACAGCTaGTGGGTGAGGAACACCAGT +
Preference number: 2 (lower is better)
Translates to: KISIAKDKLPARNTQQLWKLSYS*WVRNTS
Trigger: ACTGGTGTTCCTCACCCACCAGCTGTAACTCAGTTT...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR GCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGAAAATGTCTACAGACTaGGTGCTTGGAGCTAGGCTT +
Preference number: 2 (lower is better)
Translates to: KISIAKDKLPARNTQQLWKMSTD*VLGARL
Trigger: AAGCCTAGCTCCAAGCACGCAGTCTGTAGACATTTT...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR-3UTR GCA 90 bp TTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGATGAGGAGGTGTTCCTAATAAGCACGTaGGCAAACATCTCAGAAACA +
Preference number: 2 (lower is better)
Translates to: FMPSNSSIQRTTWKDEEVFLIST*ANISET
Trigger: TGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAA...CACCTCCTCATCTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR CCA 72 bp ACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTaGTTCACTGCCCGGGTCCGTGGGGCAGGGCGCGCC +
Preference number: 3 (lower is better)
Translates to: TSPKPRGAARDL*FTARVRGAGRA
Trigger: GGCGCGCCCTGCCCCACGGACCCGGGCAGTGAACCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR GCA 72 bp GCGCCGCCAGCGCCGGTGGGGCTCAGGAGGCTCCTCTaGAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGC +
Preference number: 3 (lower is better)
Translates to: APPAPVGLRRLL*RLVCAVVLVFR
Trigger: GCGGAATACGAGGACTACGGCGCAGACGAGCCTGCAGAGGAGCCTCCTGAGCCCCACCGGCGCTGGCGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp CGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATaGAGGGCTCGCGCTCAGGCAGGTAGGCCCCGCCCT +
Preference number: 3 (lower is better)
Translates to: RIPLSARAPPAR*RARAQAGRPRP
Trigger: AGGGCGGGGCCTACCTGCCTGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp TTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTaGTCTCTGGTTCACTGCCCGGGTCCGTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: FQHLPQASRRGA*SLVHCPGPWGR
Trigger: CCTGCCCCACGGACCCGGGCAGTGAACCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR GCA 72 bp CCGGTGGGGCTCAGGAGGCTCCTCTGCAGGCTCGTCTaGGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGG +
Preference number: 3 (lower is better)
Translates to: PVGLRRLLCRLV*AVVLVFRCPLG
Trigger: CCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTGCAGAGGAGCCTCCTGAGCCCCACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp CAGAAAAGACGTACACTGCTCTATCTGACCTGTAAATaGGAATTTCAACACCTCCCCCAAGCCTCGCGGCGC +
Preference number: 3 (lower is better)
Translates to: QKRRTLLYLTCK*EFQHLPQASRR
Trigger: GCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATTTACAGGTCAGATAGAGCAGTGTACGTCTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR CCA 72 bp TGTGGCTGTACCTCACACAAACTGAGTTACAGCTGGTaGGTGAGGAACACCAGTGACTACAGCAAAACAGGA +
Preference number: 3 (lower is better)
Translates to: CGCTSHKLSYSW*VRNTSDYSKTG
Trigger: TCCTGTTTTGCTGTAGTCACTGGTGTTCCTCACCCACCAGCTGTAACTCAGTTTGTGTGAGGTACAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR-3UTR CAA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGCTACAGACTGCGTGCTaGGAGCTAGGCTTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: KISIAKDKLPARNTQQLWLQTAC*ELGFLQ
Trigger: CTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTGTAG...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR GCA 72 bp TTTCAAGGGCAAAGGCAAAAATGTCTACAGACTGCGTaGTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCT +
Preference number: 3 (lower is better)
Translates to: FQGQRQKCLQTA*LELGFLQKQGS
Trigger: AGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTGTAGACATTTTTGCCTTTGCCCTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR-3UTR CAA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGATGAGGAGATTCCATTaGGTGTTATTCCGGCATAGA +
Preference number: 3 (lower is better)
Translates to: CVLGARLPAETRFSTIRKMRRFH*VLFRHR
Trigger: TCTATGCCGGAATAACACCAAATGGAATCTCCTCAT...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp TGCCCTGAATCAGACACATCGCTAACAAGCAAGAGATaGGGAGATTCCATTTGGTGTTATTCCGGCATAGAG +
Preference number: 3 (lower is better)
Translates to: CPESDTSLTSKR*GDSIWCYSGIE
Trigger: CTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCTGATTCAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp ACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATaGGCAACGCTGGAAGAAACACCTCAGAAAAGACGT +
Preference number: 3 (lower is better)
Translates to: TRFSTIRKGTPG*ATLEETPQKRR
Trigger: ACGTCTTTTCTGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR CCA 72 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTaGATGAGCAACGCTGGAAGAAACACCTCAGAAAAG +
Preference number: 3 (lower is better)
Translates to: RNKVLYNQKGYS*MSNAGRNTSEK
Trigger: CTTTTCTGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR TCA 72 bp GTGATGTCGACCCGGTTCGTTAACCATTATCTGTGGTaGGATTTCCATACAGACTCATTTCCTAATAAGCAC +
Preference number: 3 (lower is better)
Translates to: VMSTRFVNHYLW*DFHTDSFPNKH
Trigger: GTGCTTATTAGGAAATGAGTCTGTATGGAAATCTCACCACAGATAATGGTTAACGAACCGGGTCGACATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp ATTCAAGTTAGTAAAAAGAGTCTCCACCCTCCTTTGTaGTGTCGACCCGGTTCGTTAACCATTATCTGTGGT +
Preference number: 3 (lower is better)
Translates to: IQVSKKSLHPPL*CRPGSLTIICG
Trigger: ACCACAGATAATGGTTAACGAACCGGGTCGACATCACAAAGGAGGGTGGAGACTCTTTTTACTAACTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp GTGAAAAGCAACTATCACCAGGTAATATACAGTACATaGCATCTTCTGTGGCTGTACCTCACACAAACTGAG +
Preference number: 3 (lower is better)
Translates to: VKSNYHQVIYST*HLLWLYLTQTE
Trigger: CTCAGTTTGTGTGAGGTACAGCCACAGAAGATGTCATGTACTGTATATTACCTGGTGATAGTTGCTTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp TTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGATaGGGAGGTGAGGGGAAGTTTCATTGGCTCCTAGAA +
Preference number: 3 (lower is better)
Translates to: FKLLNSKNNLER*GGEGKFHWLLE
Trigger: TTCTAGGAGCCAATGAAACTTCCCCTCACCTCCTCATCTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
3UTR TCA 72 bp ACACACACACAGCAAAAGCTAAATCATCACCCGCGGTaGTGGCACTCCAGTCTTAATCTCATAACTATAAAT +
Preference number: 3 (lower is better)
Translates to: THTQQKLNHHPR*WHSSLNLITIN
Trigger: ATTTATAGTTATGAGATTAAGACTGGAGTGCCATCACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCTGAGCGTGGTTGTCTaGGGCCCCACACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPLSVVV*GPTLRA
Trigger: CGCTCTGAGTGTGGGGCCTCAGACAACCACGCTCAG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCTGGCTCCACCACAGTaGCCTCATCATCCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPLAPPQ*PHHPQP
Trigger: CGGCTGGGGATGATGAGGTCACTGTGGTGGAGCCAG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCCCACAGGCTGCCACTaGACATGCATGGTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPPTGCH*TCMVVG
Trigger: CCCTACCACCATGCATGTGCAGTGGCAGCCTGTGGG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCAGCTAAGGGAATGCTaGAGCCATCCTCATACTCCG +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPQLREC*SHPHTP
Trigger: CGGAGTATGAGGATGGCTTCAGCATTCCCTTAGCTG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATGAAGGGCTCGCGCTCACAACCCAGATGGACCTaGTCTGCCATGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SYSAVRSGSTGTMKGSRSQPRWT*SAMISR
Trigger: CCTGGAGATCATGGCAGACCAGGTCCATCTGGGTTG...TGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGTTGAGTTTCACCCCCTaGCACTGGGGTATATGTGAC +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPLSFTP*HWGICD
Trigger: GTCACATATACCCCAGTGGCAGGGGGTGAAACTCAA...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCCAAACGCACCTCTTTaGGTCTTGTTGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPPNAPL*VLLALC
Trigger: ACACAGAGCCAACAAGACCCAAAGAGGTGCGTTTGG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCAACAAAGGCTTCCATaGGCTCATTGGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPQQRLP*AHWNPL
Trigger: CAGTGGGTTCCAATGAGCCCATGGAAGCCTTTGTTG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCATAAATATTCAGGCTaGCTACAGGCACTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPHKYSG*LQALAR
Trigger: CCTTGCCAGTGCCTGTAGTCAGCCTGAATATTTATG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGGGACCTGGTCTGCCATaGTCTCCAGGTTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWGPGLP*SPGFPG
Trigger: GCCAGGAAAACCTGGAGATCATGGCAGACCAGGTCC...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGGCGGGCCTGGCTGGTTaGGACTGGACTGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWAGLAG*DWTGNH
Trigger: ATGATTACCAGTCCAGTCGCAACCAGCCAGGCCCGC...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTCCTGCATCCCTGGTGTaGCCGGGAAGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVPASLV*PGSLAA
Trigger: GGCGGCCAGGCTTCCCGGGCACACCAGGGATGCAGG...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCGGAAACACTGATCTaGTATTCTGTGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPAETLI*YSVSAE
Trigger: CTCAGCAGACACAGAATACCAGATCAGTGTTTCCGC...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGATCCCGGCGGCCCTGGTaGGCCCCTGGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: DCVLGARLPAETRFSTIRSRRPW*APGSHC
Trigger: GCAATGGGACCCAGGGGCCCACCAGGGCCGCCGGGA...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp TCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATGAAGGGCTCGCGCTCACCACCTCTACCTCTTTaGCATCCTCTTCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SYSAVRSGSTGTMKGSRSPPLPL*HPLLVF
Trigger: AAACACCAGAAGAGGATGTCAAAGAGGTAGAGGTGG...TGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGTCACCTTTCATCCCTTaGCGACCTTGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWSPFIP*RPCSPG
Trigger: TCCGGGAGAGCAAGGTCGCCAAGGGATGAAAGGTGA...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGACCAGGAGGTCCCGGTaGACCCGGCGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKTRRSR*TRRAWL
Trigger: CAGCCAGGCCCGCCGGGTCCACCGGGACCTCCTGGT...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCGCCGCCAGCGCCGGTaGGGCTCAGGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHRRQRR*GSGGSS
Trigger: AGAGGAGCCTCCTGAGCCCCACCGGCGCTGGCGGCG...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp TCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATGAAGGGCTCGCGCTCATTGTCCAACAAGTGGTaGGCTTTCTCCTCCATCAAA +
Preference number: 4 (lower is better)
Translates to: SYSAVRSGSTGTMKGSRSLSNKW*AFSSIK
Trigger: TTTGATGGAGGAGAAAGCTCACCACTTGTTGGACAA...TGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAGACTCCTGGGGAGCCTaGGCTTCCCGGCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGDSWGA*ASRRPW
Trigger: CCAGGGCCGCCGGGAAGCCCAGGCTCCCCAGGAGTC...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAACCAGGAGGTCCCGGTaGACCCGGCGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVTRRSR*TRRAWL
Trigger: CAGCCAGGCCCGCCGGGTCCACCGGGACCTCCTGGT...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACCGCCGCCAGCGCCGGTaGGGCTCAGGAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNRRQRR*GSGGSS
Trigger: AGAGGAGCCTCCTGAGCCCCACCGGCGCTGGCGGCG...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACGCTCCACCGGCACGATaGAGGGCTCGCGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNAPPAR*RARAQA
Trigger: TGCCTGAGCGCGAGCCCTTCATCGTGCCGGTGGAGC...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAGCTCCACCGGCACGATaGAGGGCTCGCGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLAPPAR*RARAQA
Trigger: TGCCTGAGCGCGAGCCCTTCATCGTGCCGGTGGAGC...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGATCGCGGCGCGGCGCGTaGTCTCTGGTTCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGSRRGA*SLVHCP
Trigger: CGGGCAGTGAACCAGAGATCACGCGCCGCGCCGCGA...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATGAAGGGCTCGCGCTCAAAGTTTGCCACAGCTTaGAACAAGCTCTTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SYSAVRSGSTGTMKGSRSKFATA*NKLFLS
Trigger: AGACAAGAAGAGCTTGTTGCAAGCTGTGGCAAACTT...TGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGCTTTGATGCAGAAGCTTATCCTGCATCCCTGGTGTaGCCGGGAAGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: IWCYSGIEQAAGFDAEAYPASLV*PGSLAA
Trigger: GGCGGCCAGGCTTCCCGGGCACACCAGGGATGCAGG...ATAAGCTTCTGCATCAAAGCCTGCCGCTTGCTCTATGCCGGAATAACACCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAGACTCCTGGGGAGCCTaGGCTTCCCGGCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEDSWGA*ASRRPW
Trigger: CCAGGGCCGCCGGGAAGCCCAGGCTCCCCAGGAGTC...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGACGGCATGAAGAGATCTaGGGCGGCGGCAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: DCVLGARLPAETRFSTIRRHEEI*GGGNRE
Trigger: CTCCCTGTTGCCGCCGCCTCAGATCTCTTCATGCCG...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGTCATGGCGGAAACACTaGTCTGGTATTCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWSWRKH*SGILCL
Trigger: CAGACACAGAATACCAGATCAGTGTTTCCGCCATGA...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACAGTCCATTGGGTCCCTaGGGGCCTGGAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNSPLGP*GPGGPW
Trigger: CCAGGGTCCTCCAGGCCCTCAGGGACCCAATGGACT...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACGCCAGGGGGACCTCTTaGACCTGTGGACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNARGTS*TCGPWW
Trigger: CCACCAGGGTCCACAGGTTCAAGAGGTCCCCCTGGC...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACCCCGGCGATAGGCGCTaGACTCCAGGAGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNPGDRR*TPGAPG
Trigger: GCCAGGTGCTCCTGGAGTGCAGCGCCTATCGCCGGG...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCACGTCGGAGAAGCTGGTaGTCGGTGTGGCCCCCACAC +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSRRRSW*SVWPPH
Trigger: GTGTGGGGGCCACACCGAGCACCAGCTTCTCCGACG...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGCCTTCCTTCAATCCCTaGAGCACCGTATTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWPSFNP*STVLVV
Trigger: TACAACCAATACGGTGCTGCAGGGATTGAAGGAAGG...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGGTTGTTCCTGATCCTTaGCTAAGCTTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWVVPDP*LSFPSP
Trigger: GGGAGAAGGAAAGCTTAGGCAAGGATCAGGAACAAC...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGTATGGAGTGTCAGGTTaGAGGGGCTGCAGTATTACA +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWYGVSG*RGCSIT
Trigger: TGTAATACTGCAGCCCCTGCAACCTGACACTCCATA...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAGGGTCCCTGCATCCCTaGTGTGCCCGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGGSLHP*CAREAW
Trigger: CCAGGCTTCCCGGGCACACCAGGGATGCAGGGACCC...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGATTCTCCTTGTGGACCTaGGGGGCCAGGCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGFSLWT*GARQPP
Trigger: CGGGGGCTGCCTGGCCCCCCAGGTCCACAAGGAGAA...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGCTAACTTCATCTACATaGCTTAAGGTTTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: QARLRRSPRIPLSARAPPLTSST*LKVCGC
Trigger: ACAACCACAAACCTTAAGCCATGTAGATGAAGTTAG...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGCCGGCCGATGCTCCATaGTCCATCCACCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVPADAP*SIHQQH
Trigger: GTGTTGCTGGTGGATGGATCATGGAGCATCGGCCGG...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGGAGGTGGCTGCCCGGTaGGGTGACCATTTGACACAG +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVEVAAR*GDHLTQ
Trigger: CTGTGTCAAATGGTCACCTCACCGGGCAGCCACCTC...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATGAAGGGCTCGCGCTCAATAGCTGCCAATTCTTaGTCAATTCTAAGGCAGATA +
Preference number: 4 (lower is better)
Translates to: SYSAVRSGSTGTMKGSRSIAANS*SILRQI
Trigger: TATCTGCCTTAGAATTGAGCAAGAATTGGCAGCTAT...TGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGTTTGTACGGCAAGTTTaGCACAGCTTGCAACAAGCT +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWFVRQV*HSLQQA
Trigger: AGCTTGTTGCAAGCTGTGGCAAACTTGCCGTACAAA...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGCAAGAACACAATATCTaGCTTGGCCCCTTTGCATAC +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWQEHNI*LGPFAY
Trigger: GTATGCAAAGGGGCCAAGGCAGATATTGTGTTCTTG...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGTGGTCCACACTGGACTaGAGACAATGTCAAAACTCT +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWWSTLD*RQCQNS
Trigger: AGAGTTTTGACATTGTCTGCAGTCCAGTGTGGACCA...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAAGCACCAGGTCCTCCTaGAGGGCCTGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVSTRSS*RAWRSW
Trigger: CCAGGACCTCCAGGCCCTGCAGGAGGACCTGGTGCT...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACCAGGGCGGCAAGCGCTaGGGGAAGCCTACTCCGCAT +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNQGGKR*GKPTPH
Trigger: ATGCGGAGTAGGCTTCCCCCAGCGCTTGCCGCCCTG...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACAGGGCCTGGAGGTCCTaGAGGTCCAACGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHRAWRS*RSNAVL
Trigger: CAGGACAGCGTTGGACCTCCAGGACCTCCAGGCCCT...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGTCCCGGCGGCCCTGGTaGGCCCCTGGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWSRRPW*APGSHC
Trigger: GCAATGGGACCCAGGGGCCCACCAGGGCCGCCGGGA...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGTGGACCCGGCGGGCCTaGCTGGTTGCGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRWTRRA*LVATGL
Trigger: CAGTCCAGTCGCAACCAGCCAGGCCCGCCGGGTCCA...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGACCAGGAGGTCCCGGTaGACCCGGCGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRTRRSR*TRRAWL
Trigger: CAGCCAGGCCCGCCGGGTCCACCGGGACCTCCTGGT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAAGGGTCCCTGCATCCCTaGTGTGCCCGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQGSLHP*CAREAW
Trigger: CCAGGCTTCCCGGGCACACCAGGGATGCAGGGACCC...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACGAGCTTACAGCGGCATaGAGAGATCTGAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNELTAA*RDLRRR
Trigger: CCGCCGCCTCAGATCTCTTCATGCCGCTGTAAGCTC...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGGTATCAGAGCTGTATTaGACAACTCCAACTCTTGTC +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWVSELY*TTPTLV
Trigger: GACAAGAGTTGGAGTTGTTCAATACAGCTCTGATAC...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCAACTGGCCCATCAGCATaGTCCCAGGCTACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSTGPSA*SQATER
Trigger: CCTCTCGGTAGCCTGGGATCATGCTGATGGGCCAGT...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACCAGCCCCCGAGGTCCTaGAGATCCAGTACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNQPPRS*RSSTPF
Trigger: GAAAGGGGTACTGGATCTTCAGGACCTCGGGGGCTG...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAGCCAGGGGGACCTCTTaGACCTGTGGACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEARGTS*TCGPWW
Trigger: CCACCAGGGTCCACAGGTTCAAGAGGTCCCCCTGGC...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCACTGCCTTGGCCCCTTTaGATACATCCCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSLPWPL*IHPGLV
Trigger: CACCAGCCCGGGATGTATGCAAAGGGGCCAAGGCAG...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTGCCCCTGGGTCCCATTaGACCGTCTTTTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVAPGSH*TVFSSE
Trigger: TTCACTGGAAAAGACGGTGCAATGGGACCCAGGGGC...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCACTCTGCAGGCTCGTCTaGGCCGTAGTCCTCGTATTC +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSLCRLV*AVVLVF
Trigger: GAATACGAGGACTACGGCGCAGACGAGCCTGCAGAG...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTCTCAGGAGGCTCCTCTaGAGGCTCGTCTGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNALRRLL*RLVCAV
Trigger: TACGGCGCAGACGAGCCTGCAGAGGAGCCTCCTGAG...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGACTCAGGAGGCTCCTCTaGAGGCTCGTCTGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGLRRLL*RLVCAV
Trigger: TACGGCGCAGACGAGCCTGCAGAGGAGCCTCCTGAG...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACACCGGCGTCGGAGAAGCTaGTGCTCGGTGTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LCPIQHYNYGMIWKAHTHRRRRS*CSVWPP
Trigger: TGGGGGCCACACCGAGCACCAGCTTCTCCGACGCCG...GTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGGAGGAGGTGTGGGTaGCTCTGTAGGGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKGRRCG*LCRGFC
Trigger: ACAGAAGCCCCTACAGAGCCACCCACACCTCCTCCC...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCAGGTTCCTGTTCGGCCTaGAAGTCCTGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSGSCSA*KSWLSS
Trigger: GCTGGAGAGCCAGGACTTCCAGGCCGAACAGGAACC...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCCCGGCGGCCCTGGTaGGCCCCTGGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSRRPW*APGSHC
Trigger: GCAATGGGACCCAGGGGCCCACCAGGGCCGCCGGGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGACTCCTGGGGAGCCTaGGCTTCCCGGCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVDSWGA*ASRRPW
Trigger: CCAGGGCCGCCGGGAAGCCCAGGCTCCCCAGGAGTC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACCAGGAGGTCCCGGTaGACCCGGCGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTRRSR*TRRAWL
Trigger: CAGCCAGGCCCGCCGGGTCCACCGGGACCTCCTGGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGCCCAGGTTCTCCTCTaGCTCCTGCGCTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVAQVLL*LLRYQE
Trigger: CTCCTGGTAGCGCAGGAGCCAGAGGAGAACCTGGGC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGACTCCTGGGGAGCCTaGGCCTGGTGGGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLDSWGA*AWWAPG
Trigger: CCCAGGGGCCCACCAGGCCCAGGCTCCCCAGGAGTC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGTTTAAAATTCAAGTCTaGAGGTGGGTCAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWFKIQV*RWVNFC
Trigger: GCAGAAGTTGACCCACCTTCAGACTTGAATTTTAAA...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTGTATTCTGTGTCTGCTaGGAGGTCGCGAACACTGAG +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVVFCVC*EVANTE
Trigger: CTCAGTGTTCGCGACCTCTCAGCAGACACAGAATAC...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAGGAAGTGCTGGTCTCTaGTCTGTCCACCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: DCVLGARLPAETRFSTIRGSAGL*SVHLYL
Trigger: GAGGTAGAGGTGGACAGATCAGAGACCAGCACTTCC...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGACACCGTCTTTTCCAGTaGAGCCTCTGTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DCVLGARLPAETRFSTIRHRLFQ*SLCLLE
Trigger: CTCCAGGAGACAGAGGCTTCACTGGAAAAGACGGTG...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAAGGGTCCTCGGATACCTaGGTTTCCAGGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQGSSDT*VSRTAR
Trigger: CCTGGCCGTCCTGGAAACTCAGGTATCCGAGGACCC...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTCGCGGCGCGGCGCGTaGTCTCTGGTTCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRSRRGA*SLVHCP
Trigger: CGGGCAGTGAACCAGAGATCACGCGCCGCGCCGCGA...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAACCAGGGGGCCCAATTaGCCCACTGATACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: DCVLGARLPAETRFSTIRTRGPN*PTDTSF
Trigger: GAAAGAGGTATCAGTGGGGCAATTGGGCCCCCTGGT...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGCCCCTGGGTCCCATTaGACCGTCTTTTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSAPGSH*TVFSSE
Trigger: TTCACTGGAAAAGACGGTGCAATGGGACCCAGGGGC...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAGCGGGCCTGGCTGGTTaGGACTGGACTGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLAGLAG*DWTGNH
Trigger: ATGATTACCAGTCCAGTCGCAACCAGCCAGGCCCGC...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCTGCATCCCTGGTGTaGCCGGGAAGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPASLV*PGSLAA
Trigger: GGCGGCCAGGCTTCCCGGGCACACCAGGGATGCAGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACAGGAAGACTGGAGATaGCCTGAGCCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVQEDWR*PEPAAA
Trigger: GGCAGCTGCAGGCTCAGGCCATCTCCAGTCTTCCTG...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAGCGCGGCAGGAAGACTaGAGATGGCCTGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEARQED*RWPEPA
Trigger: TGCAGGCTCAGGCCATCTCCAGTCTTCCTGCCGCGC...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGAACATTTTCTCCAGCTaGAGACCAGTTGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWNIFSS*RPVGFE
Trigger: TTCAAAACCAACTGGTCTCCAGCTGGAGAAAATGTT...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGACAATGTCAAAACTCTaGATTTGGAATGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWTMSKL*IWNAAD
Trigger: ATCAGCCGCATTCCAAATCCAGAGTTTTGACATTGT...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGACATGTGCAAGAATTTaGAAAAGCAGGGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWTCARI*KSRAFS
Trigger: GGAAAATGCCCTGCTTTTCCAAATTCTTGCACATGT...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAAAGGGCCTGGAGGTCCTaGAGGTCCAACGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQRAWRS*RSNAVL
Trigger: CAGGACAGCGTTGGACCTCCAGGACCTCCAGGCCCT...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGGTTCCTGTTCGGCCTaGAAGTCCTGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVGSCSA*KSWLSS
Trigger: GCTGGAGAGCCAGGACTTCCAGGCCGAACAGGAACC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGTGGACCCGGCGGGCCTaGCTGGTTGCGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLWTRRA*LVATGL
Trigger: CAGTCCAGTCGCAACCAGCCAGGCCCGCCGGGTCCA...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGTTCTCCTTGTGGACCTaGGGGGCCAGGCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMFSLWT*GARQPP
Trigger: CGGGGGCTGCCTGGCCCCCCAGGTCCACAAGGAGAA...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTCTGGTGGACCTGTTCTaGATTCTCCTTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVLVDLF*ILLVDL
Trigger: CAGGTCCACAAGGAGAATCCAGAACAGGTCCACCAG...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATGCGGCGCGTGATCTCTaGTTCACTGCCCGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDAARDL*FTARVR
Trigger: ACGGACCCGGGCAGTGAACCAGAGATCACGCGCCGC...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACCTGGCTTCAGGCTGCTaGGAACAACACTGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNLASGC*EQHWCS
Trigger: CGAGCACCAGTGTTGTTCTCAGCAGCCTGAAGCCAG...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGTATCTCCCCTCACAGTaGCCTCTTGAGTTTCACCCC +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVYLPSQ*PLEFHP
Trigger: GGGGTGAAACTCAAGAGGTCACTGTGAGGGGAGATA...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGGTAAGTGGCAAATACTaGAATTCTGTATTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWVSGKY*NSVFGL
Trigger: GAGACCAAATACAGAATTTCAGTATTTGCCACTTAC...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAAGACAACACGGTAGTTaGCGACTTTCCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSRQHGS*RLSLVL
Trigger: CAGCACCAGGGAAAGTCGTCAACTACCGTGTTGTCT...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGAGGCCAGTGAAGCAGTaGCTGGTTTCTGATCCACGC +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKRPVKQ*LVSDPR
Trigger: GCGTGGATCAGAAACCAGTCACTGCTTCACTGGCCT...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGAGTCCATTGGGTCCCTaGGGGCCTGGAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMSPLGP*GPGGPW
Trigger: CCAGGGTCCTCCAGGCCCTCAGGGACCCAATGGACT...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAGTCCATTGGGTCCCTaGGGGCCTGGAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSPLGP*GPGGPW
Trigger: CCAGGGTCCTCCAGGCCCTCAGGGACCCAATGGACT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAGGCTGCCACTGCACATaGATGGTGGTAGGGCCAACA +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGGCHCT*MVVGPT
Trigger: TGTTGGCCCTACCACCATGCATGTGCAGTGGCAGCC...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAATCAGCCGCTCCAGATaGACCATGCGCGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLISRSR*TMRVFP
Trigger: AGGAAACACGCGCATGGTGCATCTGGAGCGGCTGAT...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACACACTGAACCCTGACTaGTGGATGACCAAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNTLNPD*WMTKAA
Trigger: GGCGGCTTTGGTCATCCAGCAGTCAGGGTTCAGTGT...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGAGCACCAGGTCCTCCTaGAGGGCCTGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWSTRSS*RAWRSW
Trigger: CCAGGACCTCCAGGCCCTGCAGGAGGACCTGGTGCT...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAGCACCAGGTCCTCCTaGAGGGCCTGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSTRSS*RAWRSW
Trigger: CCAGGACCTCCAGGCCCTGCAGGAGGACCTGGTGCT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCAACCAGGGGGCCCAATTaGCCCACTGATACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSTRGPN*PTDTSF
Trigger: GAAAGAGGTATCAGTGGGGCAATTGGGCCCCCTGGT...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATTTCTCCTCTGGCTCCTaGGCTACCAGGAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDFSSGS*ATRRSR
Trigger: CCGGGACCTCCTGGTAGCGCAGGAGCCAGAGGAGAA...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACCTGCATCCCTGGTGTaGCCGGGAAGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSPASLV*PGSLAA
Trigger: GGCGGCCAGGCTTCCCGGGCACACCAGGGATGCAGG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACCACTCCAGGAGCACCTaGCGGCCGCCGAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHHSRST*RPPRRG
Trigger: CCCACGCCTCGGCGGCCGCCAGGTGCTCCTGGAGTG...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGCTTTGATGCAGAAGCTTATACTGGTGCTCGATGCTaGCTCCACCACAGTGACCTC +
Preference number: 4 (lower is better)
Translates to: IWCYSGIEQAAGFDAEAYTGARC*LHHSDL
Trigger: GAGGTCACTGTGGTGGAGCCAGCATCGAGCACCAGT...ATAAGCTTCTGCATCAAAGCCTGCCGCTTGCTCTATGCCGGAATAACACCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCACCTCCTCTGATTGGGTaGGGTGGTAACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSPPLIG*GGNFSA
Trigger: AGCAGAGAAGTTACCACCCCACCCAATCAGAGGAGG...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGTCTGTATTTGGTCTCTaGCTGCAGATTTTCTATCAT +
Preference number: 4 (lower is better)
Translates to: NENFNTSPKPRGAARDLWSVFGL*LQIFYH
Trigger: ATGATAGAAAATCTGCAGCCAGAGACCAAATACAGA...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTTGGTACCAGTTCCTCTaGACCACCTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNAWYQFL*TTCCWC
Trigger: GCACCAGCAGCAGGTGGTCCAGAGGAACTGGTACCA...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCAGGTATTCCCGGGGATTaGTACCAGTTCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSGIPGD*YQFLWT
Trigger: GGTCCAGAGGAACTGGTACCAATCCCCGGGAATACC...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTCCCGGGCTGGTGGAATaGTGGGAGGGGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRPGLVE*WEGEEV
Trigger: CACCTCCTCCCCCTCCCACCATTCCACCAGCCCGGG...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCCGGGCTGGTGGAATaGTGGGAGGGGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPGLVE*WEGEEV
Trigger: CACCTCCTCCCCCTCCCACCATTCCACCAGCCCGGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGCTGTACCTAATATTCTaGAGGGCCCCAAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVLYLIF*RAPRAR
Trigger: CCTAGCCCTTGGGGCCCTCCAGAATATTAGGTACAG...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTATTCTTGACCTCATCCTaGGACCGACCGTCCGTGACC +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVFLTSS*DRPSVT
Trigger: GGTCACGGACGGTCGGTCCCAGGATGAGGTCAAGAA...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACCTGAACCCTGACTGCTaGATGACCAAAGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNLNPDC*MTKAAF
Trigger: GAAGGCGGCTTTGGTCATCCAGCAGTCAGGGTTCAG...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACAAGGACCCTGGGGGCCTaGAGGACCTATGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTRTLGA*RTYVST
Trigger: CGTGGAGACATAGGTCCTCCAGGCCCCCAGGGTCCT...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTATCCTGGCTTCCCACTTaGTCCTGTGACTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVSWLPT*SCDSWG
Trigger: TCCCCAGGAGTCACAGGACCAAGTGGGAAGCCAGGA...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGGACCCGGCGGGCCTaGCTGGTTGCGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVWTRRA*LVATGL
Trigger: CAGTCCAGTCGCAACCAGCCAGGCCCGCCGGGTCCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGGTCCCTGCATCCCTaGTGTGCCCGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGSLHP*CAREAW
Trigger: CCAGGCTTCCCGGGCACACCAGGGATGCAGGGACCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGGGTCCCTGCATCCCTaGTGTGCCCGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLGSLHP*CAREAW
Trigger: CCAGGCTTCCCGGGCACACCAGGGATGCAGGGACCC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCTCCTTGTGGACCTaGGGGGCCAGGCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFSLWT*GARQPP
Trigger: CGGGGGCTGCCTGGCCCCCCAGGTCCACAAGGAGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACACCTGTGGACCCTGGTaGACCTGTTCTGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHTCGPW*TCSGFS
Trigger: GGAGAATCCAGAACAGGTCCACCAGGGTCCACAGGT...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGGGACAGCCTGGACTGTaGCTGCATACTCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRGQPGL*LHTPCW
Trigger: CCAACACGGAGTATGCAGTCACAGTCCAGGCTGTCC...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGTGAGAAGAGGTCTTTaGGGGAAGTGCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKVRRGL*GKCWSL
Trigger: CAGAGACCAGCACTTCCCTCAAAGACCTCTTCTCAC...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGATGTCCTTCCAGTATCTaGTGTGCGTCCCCCATCACC +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGCPSSI*CASPIT
Trigger: GGTGATGGGGGACGCACATCAGATACTGGAAGGACA...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTGATCCCAGGACACCCTaGATCTTGTATACCATTCGT +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVDPRTP*ILYTIR
Trigger: ACGAATGGTATACAAGATTCAGGGTGTCCTGGGATC...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAATCCCAGCAGGACTaGTTTCATCAAAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSESQQD*FHQSLP
Trigger: TGGGAGGCTTTGATGAAATCAGTCCTGCTGGGATTC...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATCCAAAGCCGCCTTCTTaGCCTCATCCTGGGACCGAC +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDPKPPS*PHPGTD
Trigger: GTCGGTCCCAGGATGAGGTCAAGAAGGCGGCTTTGG...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCACAAAGTCGTCCACAATaGACACGTGCCGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSQSRPQ*TRAVHL
Trigger: CAAGTGAACGGCACGTGTTCATTGTGGACGACTTTG...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACGCTGGGGAAAGACCCTaGCTCCAAAGATACTCCTTG +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHAGERP*LQRYSL
Trigger: CAAGGAGTATCTTTGGAGTCAGGGTCTTTCCCCAGC...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTAGGTCTGCTGTAGGCTaGTTCACAAACGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVRSAVG*FTNAFF
Trigger: GAAGAATGCGTTTGTGAATCAGCCTACAGCAGACCT...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGTCCATTGGGTCCCTaGGGGCCTGGAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSPLGP*GPGGPW
Trigger: CCAGGGTCCTCCAGGCCCTCAGGGACCCAATGGACT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCAGGGGGACCTCTTaGACCTGTGGACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVARGTS*TCGPWW
Trigger: CCACCAGGGTCCACAGGTTCAAGAGGTCCCCCTGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGCCAGGGGGACCTCTTaGACCTGTGGACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLARGTS*TCGPWW
Trigger: CCACCAGGGTCCACAGGTTCAAGAGGTCCCCCTGGC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGGGTCCTCGGATACCTaGGTTTCCAGGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWGSSDT*VSRTAR
Trigger: CCTGGCCGTCCTGGAAACTCAGGTATCCGAGGACCC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGAAGGGTACTCCTGGATaGGCAACGCTGGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVKGTPG*ATLEET
Trigger: TGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTT...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGTCTGGCTTCAGTTTCTaGAGGACCACACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVSGFSF*RTTLFC
Trigger: GCAGAACAGTGTGGTCCTGCAGAAACTGAAGCCAGA...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACACACTGAACCCTGACTaGTGGATGACCAAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNTLNPD*WMTKAA
Trigger: GGCGGCTTTGGTCATCCAGCAGTCAGGGTTCAGTGT...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGCACCAGGTCCTCCTaGAGGGCCTGGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSTRSS*RAWRSW
Trigger: CCAGGACCTCCAGGCCCTGCAGGAGGACCTGGTGCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGCCCGTTGTATGGGATaGTGGCACACTGAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSARCMG*WHTEKN
Trigger: ATTCTTCTCAGTGTGCCAGCATCCCATACAACGGGC...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACTGTCTACAGACTGCGTaGTTGGAGCTAGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHCLQTA*LELGFL
Trigger: CAGGAAGCCTAGCTCCAAGCACGCAGTCTGTAGACA...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCCTGCAGCACCGTATTaGTTGTATCTCCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHPAAPY*LYLPSQ
Trigger: CTGTGAGGGGAGATACAACCAATACGGTGCTGCAGG...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGCTGCATACTCCGTGTTaGGAACAAGGTCAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVLHTPC*EQGQSA
Trigger: AGCTGACTGACCTTGTTCCCAACACGGAGTATGCAG...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACGGATTTCCCTCTGCATaGTCCCAGCGGACATTCAAG +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNGFPSA*SQRTFK
Trigger: CTTGAATGTCCGCTGGGACCATGCAGAGGGAAATCC...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCCTGTACTGCTGAACTaGCCCATCAGCATGATCCCA +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHPVLLN*PISMIP
Trigger: TGGGATCATGCTGATGGGCCAGTTCAGCAGTACAGG...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACACTTAGCCTGTAGGAGGTaGCTGCCCGGTGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: LCPIQHYNYGMIWKAHTHLACRR*LPGEVT
Trigger: GGTCACCTCACCGGGCAGCCACCTCCTACAGGCTAA...GTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACCCGGGCTGGTGGAATaGTGGGAGGGGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSPGLVE*WEGEEV
Trigger: CACCTCCTCCCCCTCCCACCATTCCACCAGCCCGGG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGCATACATCCCGGGCTaGTGGAATGGTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWAYIPG*WNGGRG
Trigger: CCCCCTCCCACCATTCCACCAGCCCGGGATGTATGC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGCACGTGCCGTTCACTTaGTTTGCTGGCAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKHVPFT*FAGNVG
Trigger: GCCAACATTGCCAGCAAACCAAGTGAACGGCACGTG...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGAGGACCCTGGGGGCCTaGAGGACCTATGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWRTLGA*RTYVST
Trigger: CGTGGAGACATAGGTCCTCCAGGCCCCCAGGGTCCT...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAATCCTGGCTTCCCACTTaGTCCTGTGACTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQSWLPT*SCDSWG
Trigger: TCCCCAGGAGTCACAGGACCAAGTGGGAAGCCAGGA...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGCCCAGGTTCTCCTCTaGCTCCTGCGCTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRAQVLL*LLRYQE
Trigger: CTCCTGGTAGCGCAGGAGCCAGAGGAGAACCTGGGC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCTCCTTGTGGACCTaGGGGGCCAGGCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFSLWT*GARQPP
Trigger: CGGGGGCTGCCTGGCCCCCCAGGTCCACAAGGAGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGCCTTGCCCGTTGTATaGGATGCTGGCACACTGAGA +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVALPVV*DAGTLR
Trigger: TCTCAGTGTGCCAGCATCCCATACAACGGGCAAGGC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCCTTGCCCGTTGTATaGGATGCTGGCACACTGAGA +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNALPVV*DAGTLR
Trigger: TCTCAGTGTGCCAGCATCCCATACAACGGGCAAGGC...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGATGAGGAGGTGGCGGCGCGTGATCTCTaGTTCACTGCCCGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: FMPSNSSIQRTTWKDEEVAARDL*FTARVR
Trigger: ACGGACCCGGGCAGTGAACCAGAGATCACGCGCCGC...CACCTCCTCATCTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGGGCACGTAAGGCTCTaGATAGCCTTGCCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVGHVRL*IALPVV
Trigger: TACAACGGGCAAGGCTATCCAGAGCCTTACGTGCCC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425443.6
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGGCCTGGTGGGCCCCTaGGTCCCATTGCACCGTCTT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLGLVGP*VPLHRL
Trigger: AAGACGGTGCAATGGGACCCAGGGGCCCACCAGGCC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGGAGCCTGGGCCTGGTaGGCCCCTGGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNGAWAW*APGSHC
Trigger: GCAATGGGACCCAGGGGCCCACCAGGCCCAGGCTCC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCGGCATGAAGAGATCTaGGGCGGCGGCAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVRHEEI*GGGNRE
Trigger: CTCCCTGTTGCCGCCGCCTCAGATCTCTTCATGCCG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACTGAGCGTGGTTGTCTaGGGCCCCACACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLSVVV*GPTLRA
Trigger: CGCTCTGAGTGTGGGGCCTCAGACAACCACGCTCAG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGAGAGGTCGCGAACACTaGGCGTGGTTGTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLRGREH*AWLSEA
Trigger: GGCCTCAGACAACCACGCTCAGTGTTCGCGACCTCT...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAGAGGTCGCGAACACTaGGCGTGGTTGTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRRGREH*AWLSEA
Trigger: GGCCTCAGACAACCACGCTCAGTGTTCGCGACCTCT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGTGGCACATTGCTTCTTaGTCCCTTGCTAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVWHIAS*SLARHK
Trigger: TTTGTGCCTAGCAAGGGATCAAGAAGCAATGTGCCA...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTCCACTGGGGTATATGTaGCGAGATACTGTTTCACTT +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVPLGYM*RDTVSL
Trigger: AAGTGAAACAGTATCTCGTCACATATACCCCAGTGG...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATCTGCCTCAGCTCTGGTaGGACACTCCATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDLPQLW*DTPSQK
Trigger: CTTCTGGGATGGAGTGTCTCACCAGAGCTGAGGCAG...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGACCACTCCCTCATCCTTaGGTTTCTTTGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: DCVLGARLPAETRFSTIRPLPHP*VSLKVL
Trigger: AAGCACCTTCAAAGAAACTCAAGGATGAGGGAGTGG...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGTGTGTACAAGGTCTGTaGGAAGAGGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVCVQGL*EEVFEG
Trigger: TCCCTCAAAGACCTCTTCTCACAGACCTTGTACACA...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGACTGGCCCATCAGCATaGTCCCAGGCTACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRTGPSA*SQATER
Trigger: CCTCTCGGTAGCCTGGGATCATGCTGATGGGCCAGT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGATAATCAGTGTCTGGTaGAAGGCCAGTGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVIISVW*KASEAV
Trigger: CACTGCTTCACTGGCCTTTCACCAGACACTGATTAT...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGAAAGACACTGAACCCTaGCTGCTGGATGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKKDTEP*LLDDQS
Trigger: GCTTTGGTCATCCAGCAGTCAGGGTTCAGTGTCTTT...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAGCTGGGGAAAGACCCTaGCTCCAAAGATACTCCTTG +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGAGERP*LQRYSL
Trigger: CAAGGAGTATCTTTGGAGTCAGGGTCTTTCCCCAGC...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAAGGTCTGCTGTAGGCTaGTTCACAAACGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSRSAVG*FTNAFF
Trigger: GAAGAATGCGTTTGTGAATCAGCCTACAGCAGACCT...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAGCCCAATTGCCCCACTaGTACCTCTTTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEAQLPH*YLFHLW
Trigger: CCAGAGGTGAAAGAGGTATCAGTGGGGCAATTGGGC...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATGGACCTGGTCTGCCATaGTCTCCAGGTTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDGPGLP*SPGFPG
Trigger: GCCAGGAAAACCTGGAGATCATGGCAGACCAGGTCC...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGGTCCTCGGATACCTaGGTTTCCAGGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGSSDT*VSRTAR
Trigger: CCTGGCCGTCCTGGAAACTCAGGTATCCGAGGACCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACAGGTGGGTCAACTTCTaGCTCAATGGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNRWVNF*LNGRQE
Trigger: CTCCTGTCTTCCATTGAGGCAGAAGTTGACCCACCT...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAAACACTGGTGCTCGATaGTGGCTCCACCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEENTGAR*WLHHSD
Trigger: GTCACTGTGGTGGAGCCAGCATCGAGCACCAGTGTT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGCTGTGTGCATTTAACTaGCACTCTGTTCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: QEMRRFHLVLFRHRASGRLCAFN*HSVLGS
Trigger: GGATCCCAGAACAGAGTGGCAGTTAAATGCACACAG...CCTGCCGCTTGCTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCCCACAGGCTGCCACTaGACATGCATGGTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRPTGCH*TCMVVG
Trigger: CCCTACCACCATGCATGTGCAGTGGCAGCCTGTGGG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACTTCCAGTATCTGATGTaGGTCCCCCATCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNFQYLM*VPHHLQ
Trigger: CTGAAGGTGATGGGGGACGCACATCAGATACTGGAA...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGGCTCCAGATGCACCATaGGCGTGTTTCCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRAPDAP*ACFLAL
Trigger: TAGTGCCAGGAAACACGCGCATGGTGCATCTGGAGC...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCAGCCGTTCACTTGGTTTaGTGGCAATGTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSAVHLV*WQCWQA
Trigger: AGCTTGCCAACATTGCCAGCAAACCAAGTGAACGGC...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCTCCTCTGGCTCCTaGGCTACCAGGAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFSSGS*ATRRSR
Trigger: CCGGGACCTCCTGGTAGCGCAGGAGCCAGAGGAGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACGCCCGTTGTATGGGATaGTGGCACACTGAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNARCMG*WHTEKN
Trigger: ATTCTTCTCAGTGTGCCAGCATCCCATACAACGGGC...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGCTTTTACTTCTTCGGTaGTCTCCTCTCCAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVLLLLR*SPLQLR
Trigger: CCTTAGCTGGAGAGGAGACCACCGAAGAAGTAAAAG...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACTTCACCCCCTGCCACTaGGGTATATGTGACGAGATA +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNFTPCH*GICDEI
Trigger: TATCTCGTCACATATACCCCAGTGGCAGGGGGTGAA...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGTCTCATGCCAGCTTaGGTCCTGAAGTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNAGLMPA*VLKFCW
Trigger: CCAACAGAACTTCAGGACCCAAGCTGGCATGAGACC...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCACAGTGTTTAGAGGTTTaGTCTTGCCTCTTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSQCLEV*SCLFPS
Trigger: TGACGGGAAGAGGCAAGACCAAACCTCTAAACACTG...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCATACATCCCGGGCTaGTGGAATGGTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAYIPG*WNGGRG
Trigger: CCCCCTCCCACCATTCCACCAGCCCGGGATGTATGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGCATACATCCCGGGCTaGTGGAATGGTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLAYIPG*WNGGRG
Trigger: CCCCCTCCCACCATTCCACCAGCCCGGGATGTATGC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGGGCCTGGAGGTCCTaGAGGTCCAACGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVRAWRS*RSNAVL
Trigger: CAGGACAGCGTTGGACCTCCAGGACCTCCAGGCCCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGGACCCTGGGGGCCTaGAGGACCTATGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVRTLGA*RTYVST
Trigger: CGTGGAGACATAGGTCCTCCAGGCCCCCAGGGTCCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAATCGGCCTGGAAGTCCTaGCTCTCCAGCATCACCTTT +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQSAWKS*LSSITF
Trigger: AAAGGTGATGCTGGAGAGCCAGGACTTCCAGGCCGA...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTGGACCCGGCGGGCCTaGCTGGTTGCGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNWTRRA*LVATGL
Trigger: CAGTCCAGTCGCAACCAGCCAGGCCCGCCGGGTCCA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTGCCCAGGTTCTCCTCTaGCTCCTGCGCTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRAQVLL*LLRYQE
Trigger: CTCCTGGTAGCGCAGGAGCCAGAGGAGAACCTGGGC...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCCAGGTTCTCCTCTaGCTCCTGCGCTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAQVLL*LLRYQE
Trigger: CTCCTGGTAGCGCAGGAGCCAGAGGAGAACCTGGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTATTCACCTTTCTCTCCTaGCAAACCTCGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVFTFLS*QTSFPR
Trigger: CCTGGGGAACGAGGTTTGCCAGGAGAGAAAGGTGAA...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGCTTTGATGCAGAAGCTTATGTGTTAGCCGGAACCTaGATAGCCTTGCCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: IWCYSGIEQAAGFDAEAYVLAGT*IALPVV
Trigger: TACAACGGGCAAGGCTATCCAGGTTCCGGCTAACAC...ATAAGCTTCTGCATCAAAGCCTGCCGCTTGCTCTATGCCGGAATAACACCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTACAGAAAGGGTACTCCTaGATGAGCAACGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLQKGYS*MSNAGR
Trigger: TCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTG...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR CAA 72 bp CAAGGGCAAAGGCAAAAATGTCTACAGACTGCGTGCTaGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: QGQRQKCLQTAC*ELGFLQKQGSL
Trigger: TAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTGTAGACATTTTTGCCTTTGCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGAGCTTACAGCGGCATaGAGAGATCTGAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVELTAA*RDLRRR
Trigger: CCGCCGCCTCAGATCTCTTCATGCCGCTGTAAGCTC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGGAAAACATGGTTCAGTaGAGGTGTGGAGGCAATTTG +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVENMVQ*RCGGNL
Trigger: CAAATTGCCTCCACACCTTCACTGAACCATGTTTTC...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTGGCTCCACCACAGTaGCCTCATCATCCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLAPPQ*PHHPQP
Trigger: CGGCTGGGGATGATGAGGTCACTGTGGTGGAGCCAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAAGTGTTCTCCTCCTCTaGTTGGGTGGGGTGGTAACT +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEESVLLL*LGGVVT
Trigger: AGTTACCACCCCACCCAATCAGAGGAGGAGAACACT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCGGCCGATGCTCCATaGTCCATCCACCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPADAP*SIHQQH
Trigger: GTGTTGCTGGTGGATGGATCATGGAGCATCGGCCGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGGTCTCCATCTTATCTaGGCTTCCAAAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNGLHLI*ASKRCP
Trigger: TGGGCACCTTTTGGAAGCTCAGATAAGATGGAGACC...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACTGGCCCATCAGCATaGTCCCAGGCTACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTGPSA*SQATER
Trigger: CCTCTCGGTAGCCTGGGATCATGCTGATGGGCCAGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGAGGTGGCTGCCCGGTaGGGTGACCATTTGACACAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVEVAAR*GDHLTQ
Trigger: CTGTGTCAAATGGTCACCTCACCGGGCAGCCACCTC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCAAAGCCGCCTTCTTaGCCTCATCCTGGGACCGAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPKPPS*PHPGTD
Trigger: GTCGGTCCCAGGATGAGGTCAAGAAGGCGGCTTTGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTAAAGACACTGAACCCTaGCTGCTGGATGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNAKDTEP*LLDDQS
Trigger: GCTTTGGTCATCCAGCAGTCAGGGTTCAGTGTCTTT...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCTGAATCCTGTATGCTaGGTAGCTGGGGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRLNPVC*VAGERP
Trigger: GGGTCTTTCCCCAGCTACTCAGCATACAGGATTCAG...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGGACCTGGTCTGCCATaGTCTCCAGGTTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRGPGLP*SPGFPG
Trigger: GCCAGGAAAACCTGGAGATCATGGCAGACCAGGTCC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTCAGCCCCCGAGGTCCTaGAGATCCAGTACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRQPPRS*RSSTPF
Trigger: GAAAGGGGTACTGGATCTTCAGGACCTCGGGGGCTG...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAGCCCCCGAGGTCCTaGAGATCCAGTACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQPPRS*RSSTPF
Trigger: GAAAGGGGTACTGGATCTTCAGGACCTCGGGGGCTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGGGATGCTGGCACACTaGGAAGAATCACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVGMLAH*EESQYP
Trigger: TGGATACTGTGATTCTTCTCAGTGTGCCAGCATCCC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAAATTTGCCCGGCCGATaGTCCATGATCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEENLPGR*SMIHPP
Trigger: TGGTGGATGGATCATGGAGCATCGGCCGGGCAAATT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCCACAGGCTGCCACTaGACATGCATGGTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPTGCH*TCMVVG
Trigger: CCCTACCACCATGCATGTGCAGTGGCAGCCTGTGGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCTCCTCCCACAGGCTaGCACTGCACATGCATGGTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAPPTG*HCTCMV
Trigger: CACCATGCATGTGCAGTGGCAGCCTGTGGGAGGAGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGACCTATTGTGGTCGTTTaGTCATTGCCTTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGPIVVV*SLPSPV
Trigger: CACAGGGGAAGGCAATGAGCAAACGACCACAATAGG...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAATTCCTCTGGACCACCTaGTGCTGGTGCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEFLWTT*CWCIEE
Trigger: CTCTTCTATGCACCAGCAGCAGGTGGTCCAGAGGAA...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGTTCCTTGGTCCACTaGGTGGTAGCGTTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGSLVH*VVAFGP
Trigger: AGGGCCGAACGCTACCACGCAGTGGACCAAGGAACC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGCCTTGGCCCCTTTaGATACATCCCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLPWPL*IHPGLV
Trigger: CACCAGCCCGGGATGTATGCAAAGGGGCCAAGGCAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACTGCCTTGGCCCCTTTaGATACATCCCGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLPWPL*IHPGLV
Trigger: CACCAGCCCGGGATGTATGCAAAGGGGCCAAGGCAG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTTGTGATTTGCCAAATTaGAAAAGGGTCACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVCDLPN*KRVTGS
Trigger: ACTCCCAGTGACCCTTTTGCAATTTGGCAAATCACA...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACGACTTGTCTTGCAACTaGTCGCATCATGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNDLSCN*SHHVLG
Trigger: TCCCAGAACATGATGCGAGCAGTTGCAAGACAAGTC...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACGACTTGTCTTGCAACTaGTCGCATCATGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHDLSCN*SHHVLG
Trigger: TCCCAGAACATGATGCGAGCAGTTGCAAGACAAGTC...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCTCCTCTGGCTCCTaGGCTACCAGGAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFSSGS*ATRRSR
Trigger: CCGGGACCTCCTGGTAGCGCAGGAGCCAGAGGAGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGACGAAGCTCTCTTGCTaGAATTTCCACTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVTKLSC*NFHFIL
Trigger: CAGGATGAAGTGGAAATTCCAGCAAGAGAGCTTCGT...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACACCGCGAACCATTCCTaGAGCAGATGTCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNTANHS*SRCPIS
Trigger: GCTTATTGGACATCTGCTCCAGGAATGGTTCGCGGT...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTGGTACCAGTTCCTCTaGACCACCTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRWYQFL*TTCCWC
Trigger: GCACCAGCAGCAGGTGGTCCAGAGGAACTGGTACCA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTGCAGCACAGGTCCTaGAGCAGGGTCCCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLQHRS*SRVPAN
Trigger: GTTCGCTGGGACCCTGCTCCAGGACCTGTGCTGCAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATTGCAGCACAGGTCCTaGAGCAGGGTCCCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLQHRS*SRVPAN
Trigger: GTTCGCTGGGACCCTGCTCCAGGACCTGTGCTGCAA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTAGCCTGTAGGAGGTaGCTGCCCGGTGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLACRR*LPGEVT
Trigger: GGTCACCTCACCGGGCAGCCACCTCCTACAGGCTAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATTAGCCTGTAGGAGGTaGCTGCCCGGTGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLACRR*LPGEVT
Trigger: GGTCACCTCACCGGGCAGCCACCTCCTACAGGCTAA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGTGGTCCCTCGAGATTTaGTGTCTGCACAAAAACAGT +
Preference number: 4 (lower is better)
Translates to: QEMRRFHLVLFRHRASGRWSLEI*CLHKNS
Trigger: ACTGTTTTTGTGCAGACACCAAATCTCGAGGGACCA...CCTGCCGCTTGCTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGGAGGAGGTGTGGGTaGCTCTGTAGGGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGRRCG*LCRGFC
Trigger: ACAGAAGCCCCTACAGAGCCACCCACACCTCCTCCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGGGAGGAGGTGTGGGTaGCTCTGTAGGGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLGRRCG*LCRGFC
Trigger: ACAGAAGCCCCTACAGAGCCACCCACACCTCCTCCC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGTTTGCTGGCAATGTTaGCAAGCTCATTGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSVCWQC*QAHCSR
Trigger: TCGACTACAATGAGCTTGCCAACATTGCCAGCAAAC...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCACGTGCCGTTCACTTaGTTTGCTGGCAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRHVPFT*FAGNVG
Trigger: GCCAACATTGCCAGCAAACCAAGTGAACGGCACGTG...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGATGTATGCTGAGTAGCTaGGGAAAGACCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGCMLSS*GKTLTP
Trigger: TGGAGTCAGGGTCTTTCCCCAGCTACTCAGCATACA...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGTTCCTGTTCGGCCTaGAAGTCCTGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGSCSA*KSWLSS
Trigger: GCTGGAGAGCCAGGACTTCCAGGCCGAACAGGAACC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGGTTCCTGTTCGGCCTaGAAGTCCTGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLGSCSA*KSWLSS
Trigger: GCTGGAGAGCCAGGACTTCCAGGCCGAACAGGAACC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTCCTGGCTTCCCACTTaGTCCTGTGACTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSWLPT*SCDSWG
Trigger: TCCCCAGGAGTCACAGGACCAAGTGGGAAGCCAGGA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTACATTGCACAAATACTTaGGAAGGGTCAGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLHCTNT*EGSETG
Trigger: CCCAGTCTCTGACCCTTCCCAAGTATTTGTGCAATG...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACAATACACAGCAGCTCTaGGTTCCAGGACTTAACTGC +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNNTQQL*VPGLNC
Trigger: GCAGTTAAGTCCTGGAACCCAGAGCTGCTGTGTATT...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCGGCATGAAGAGATCTaGGGCGGCGGCAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNRHEEI*GGGNRE
Trigger: CTCCCTGTTGCCGCCGCCTCAGATCTCTTCATGCCG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACAGCACACCTGGGAGATaGTCTCATTCTGAATATCCA +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNSTPGR*SHSEYP
Trigger: TGGATATTCAGAATGAGATCATCTCCCAGGTGTGCT...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGACATGGCAATCAAATTTaGAGGAGGCTCAACAACTTC +
Preference number: 4 (lower is better)
Translates to: DCVLGARLPAETRFSTIRHGNQI*RRLNNF
Trigger: GAAGTTGTTGAGCCTCCTTCAAATTTGATTGCCATG...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGCTCACAGTGACCTCTTaGGTTTCACCCCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWLTVTS*VSPPAT
Trigger: AGTGGCAGGGGGTGAAACTCAAGAGGTCACTGTGAG...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCACCAATAAGCCCCAATTaGTGTGTCAGTGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSPISPN*CVSDVF
Trigger: AAAGACATCACTGACACATCAATTGGGGCTTATTGG...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACCGGCCGATGCTCCATaGTCCATCCACCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSPADAP*SIHQQH
Trigger: GTGTTGCTGGTGGATGGATCATGGAGCATCGGCCGG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACTCAAAGCCATGCCTGTaGGAGTATTGCCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNSKPCL*EYCLLC
Trigger: ACAAAGGAGGCAATACTCTCACAGGCATGGCTTTGA...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGAGTTCTGTTGGCGAATaGAATTCAAAGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKSSVGE*NSKPCL
Trigger: CAGGCATGGCTTTGAATTTCATTCGCCAACAGAACT...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGACAGCCTGGACTGTaGCTGCATACTCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGQPGL*LHTPCW
Trigger: CCAACACGGAGTATGCAGTCACAGTCCAGGCTGTCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGGACAGCCTGGACTGTaGCTGCATACTCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLGQPGL*LHTPCW
Trigger: CCAACACGGAGTATGCAGTCACAGTCCAGGCTGTCC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGGAAGTGCTGGTCTCTaGTCTGTCCACCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRGSAGL*SVHLYL
Trigger: GAGGTAGAGGTGGACAGATCAGAGACCAGCACTTCC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAAGTACTGCAGAAACGCTaGCTGTGTACAAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQVLQKR*LCTRSV
Trigger: CACAGACCTTGTACACAGTCAGCGTTTCTGCAGTAC...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGGGTCGGGTAGTTTCTTaGGCAGTCACTGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLGRVVS*AVTGGD
Trigger: GTCTCCTCCAGTGACTGCTCAAGAAACTACCCGACC...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGTAGAGAGACACATCTaGAGCTCCATGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNAVERHI*SSMIPS
Trigger: ACTTGGGATCATGGAGCTTCAGATGTGTCTCTCTAC...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACAGGTCATCACTTTCTaGCTCATCAGGATAGATGGC +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVQVITF*LIRIDG
Trigger: GCCATCTATCCTGATGAGTCAGAAAGTGATGACCTG...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGAGGTGGCTGCCCGGTaGGGTGACCATTTGACACAG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSEVAAR*GDHLTQ
Trigger: CTGTGTCAAATGGTCACCTCACCGGGCAGCCACCTC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACAAAGTCGTCCACAATaGACACGTGCCGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQQSRPQ*TRAVHL
Trigger: CAAGTGAACGGCACGTGTTCATTGTGGACGACTTTG...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGCACCGTCTTTTCCAGTaGAGCCTCTGTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMHRLFQ*SLCLLE
Trigger: CTCCAGGAGACAGAGGCTTCACTGGAAAAGACGGTG...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGACCTGGTCTGCCATaGTCTCCAGGTTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGPGLP*SPGFPG
Trigger: GCCAGGAAAACCTGGAGATCATGGCAGACCAGGTCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACAGCCCCCGAGGTCCTaGAGATCCAGTACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSQPPRS*RSSTPF
Trigger: GAAAGGGGTACTGGATCTTCAGGACCTCGGGGGCTG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGGGTCCTCGGATACCTaGGTTTCCAGGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNGSSDT*VSRTAR
Trigger: CCTGGCCGTCCTGGAAACTCAGGTATCCGAGGACCC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAGGGATGCTGGCACACTaGGAAGAATCACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEGMLAH*EESQYP
Trigger: TGGATACTGTGATTCTTCTCAGTGTGCCAGCATCCC...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGCTCCACCCTCCTTTGTaGTGTCGACCCGGTTCGTTA +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWLHPPL*CRPGSL
Trigger: TAACGAACCGGGTCGACATCACAAAGGAGGGTGGAG...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAAAGGGTACTCCTGGATaGGCAACGCTGGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEKGTPG*ATLEET
Trigger: TGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGCCTCAGCTCTGGTaGGACACTCCATCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLPQLW*DTPSLL
Trigger: CAGAAGGGATGGAGTGTCTCACCAGAGCTGAGGCAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345356.10
CDS-3UTR GCA 90 bp CTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACACGTGCTGTCGGCTTCCTaGAGTCATTGGTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LCPIQHYNYGMIWKAHTHVLSAS*SHWCED
Trigger: ATCCTCACACCAATGACTGCAGGAAGCCGACAGCAC...GTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCACCCACACTCAGAGCGTaGTGTCGGCTTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSPTLRA*CRLPAV
Trigger: GACTGCAGGAAGCCGACAGCACGCTCTGAGTGTGGG...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACCCACACTCAGAGCGTaGTGTCGGCTTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSPTLRA*CRLPAV
Trigger: GACTGCAGGAAGCCGACAGCACGCTCTGAGTGTGGG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAGTTCTCCTTCTCCACTaGTGTAAGTGGCAAATACTG +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLVLLLH*CKWQIL
Trigger: CAGTATTTGCCACTTACAGCAGTGGAGAAGGAGAAC...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGACGACTTTCCCTGGTaGTGGTTTCCATGTAACTCT +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVDDFPW*WFPCNS
Trigger: AGAGTTACATGGAAACCAGCACCAGGGAAAGTCGTC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCAGCAACACAATGTCTaGCTCAGCTCTGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRQQHNV*LSSGET
Trigger: TGTCTCACCAGAGCTGAGGCAGACATTGTGTTGCTG...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGCTGCCACTGCACATaGATGGTGGTAGGGCCAACA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGCHCT*MVVGPT
Trigger: TGTTGGCCCTACCACCATGCATGTGCAGTGGCAGCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGGCTGCCACTGCACATaGATGGTGGTAGGGCCAACA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLGCHCT*MVVGPT
Trigger: TGTTGGCCCTACCACCATGCATGTGCAGTGGCAGCC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGGCTCCTCCCACAGGCTaGCACTGCACATGCATGGTG +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKAPPTG*HCTCMV
Trigger: CACCATGCATGTGCAGTGGCAGCCTGTGGGAGGAGC...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCAATTCTGAGGGTCTTGTaGCATCCACAGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSILRVL*HPQENT
Trigger: TGTATTCTCCTGTGGATGGCACAAGACCCTCAGAAT...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGCTCCAGATGCACCATaGGCGTGTTTCCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRAPDAP*ACFLAL
Trigger: TAGTGCCAGGAAACACGCGCATGGTGCATCTGGAGC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGGGTTCCTTGGTCCACTaGGTGGTAGCGTTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKGSLVH*VVAFGP
Trigger: AGGGCCGAACGCTACCACGCAGTGGACCAAGGAACC...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGGTTCCTTGGTCCACTaGGTGGTAGCGTTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSGSLVH*VVAFGP
Trigger: AGGGCCGAACGCTACCACGCAGTGGACCAAGGAACC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACCTTGCTAGAAGGATCTaGAATCACTCCAACTTGTGG +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNLARRI*NHSNLW
Trigger: CCACAAGTTGGAGTGATTGCAGATCCTTCTAGCAAG...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCGGGCCTGGCTGGTTaGGACTGGACTGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAGLAG*DWTGNH
Trigger: ATGATTACCAGTCCAGTCGCAACCAGCCAGGCCCGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATTGTCTACAGACTGCGTaGTTGGAGCTAGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDCLQTA*LELGFL
Trigger: CAGGAAGCCTAGCTCCAAGCACGCAGTCTGTAGACA...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGATCATCCACTATCCTaGAGAGTGACTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSDHPLS*RVTQNL
Trigger: CAGATTTTGAGTCACTCTCCAGGATAGTGGATGATC...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCACTTCATAGATGGTGTTaGGGTTCAGGTTTTCGAACA +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSLHRWC*GSGFRT
Trigger: TGTTCGAAAACCTGAACCCCAACACCATCTATGAAG...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGGTACCAGTTCCTCTaGACCACCTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVWYQFL*TTCCWC
Trigger: GCACCAGCAGCAGGTGGTCCAGAGGAACTGGTACCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCATGTAGGGGCTTCTGTTaGTTTCACAGTGGTATGTTC +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSCRGFC*FHSGMF
Trigger: GAACATACCACTGTGAAACCAACAGAAGCCCCTACA...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTACACAATATCTGCCTTaGCCCCTTTGCATACATCCC +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNATQYLP*PLCIHP
Trigger: GGGATGTATGCAAAGGGGCCAAGGCAGATATTGTGT...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCTTGACCTCATCCTaGGACCGACCGTCCGTGACC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFLTSS*DRPSVT
Trigger: GGTCACGGACGGTCGGTCCCAGGATGAGGTCAAGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATAGGGCCTGGAGGTCCTaGAGGTCCAACGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNRAWRS*RSNAVL
Trigger: CAGGACAGCGTTGGACCTCCAGGACCTCCAGGCCCT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATAGGACCCTGGGGGCCTaGAGGACCTATGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNRTLGA*RTYVST
Trigger: CGTGGAGACATAGGTCCTCCAGGCCCCCAGGGTCCT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCCTGGCTTCCCACTTaGTCCTGTGACTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSWLPT*SCDSWG
Trigger: TCCCCAGGAGTCACAGGACCAAGTGGGAAGCCAGGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGCAACCCAGATGGACCTaGTCTGCCATGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLQPRWT*SAMISR
Trigger: CCTGGAGATCATGGCAGACCAGGTCCATCTGGGTTG...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACCTGGCTGGTTGCGACTaGACTGGTAATCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNLAGCD*TGNHLE
Trigger: TTCCAAATGATTACCAGTCCAGTCGCAACCAGCCAG...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTCTGGCTGGTTGCGACTaGACTGGTAATCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNALAGCD*TGNHLE
Trigger: TTCCAAATGATTACCAGTCCAGTCGCAACCAGCCAG...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGACCTGTGGACCCTGGTaGACCTGTTCTGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMTCGPW*TCSGFS
Trigger: GGAGAATCCAGAACAGGTCCACCAGGGTCCACAGGT...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGACCTGTGGACCCTGGTaGACCTGTTCTGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRTCGPW*TCSGFS
Trigger: GGAGAATCCAGAACAGGTCCACCAGGGTCCACAGGT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGACCTCTTGAACCTGTaGACCCTGGTGGACCTGTTC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWDLLNL*TLVDLF
Trigger: GAACAGGTCCACCAGGGTCCACAGGTTCAAGAGGTC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGGACCTCTTGAACCTGTaGACCCTGGTGGACCTGTTC +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMDLLNL*TLVDLF
Trigger: GAACAGGTCCACCAGGGTCCACAGGTTCAAGAGGTC...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGACGTTGTATGGGATGCTaGCACACTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: RNKVLYNQKGYSWMSNAGRCMGC*HTEKNH
Trigger: GTGATTCTTCTCAGTGTGCCAGCATCCCATACAACG...TCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAACAGAAAGGGTACTCCTaGATGAGCAACGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEQKGYS*MSNAGR
Trigger: TCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTG...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTAGGTTTAAGGCAATATaGAACTGTATCCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVRFKAI*NCIPLM
Trigger: CATCAACGGGATACAGTTCCATATTGCCTTAAACCT...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCATTATCGCAGGATCTCTaGAAGCATCTGATGATTTCC +
Preference number: 4 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSLSQDL*KHLMIS
Trigger: GGAAATCATCAGATGCTTTCAGAGATCCTGCGATAA...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCAGCTAAGGGAATGCTaGAGCCATCCTCATACTCCG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRQLREC*SHPHTP
Trigger: CGGAGTATGAGGATGGCTTCAGCATTCCCTTAGCTG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTATGGAGTACCAGGTCCTaGGAAATATTCAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLWSTRS*EIFRNY
Trigger: GTAATTCCTGAATATTTCTCAGGACCTGGTACTCCA...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACTCACAGTGACCTCTTaGGTTTCACCCCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLTVTS*VSPPAT
Trigger: AGTGGCAGGGGGTGAAACTCAAGAGGTCACTGTGAG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACACAGTCACTCGGAAGCTTaGCATGGTTGGGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: LCPIQHYNYGMIWKAHTHSHSEA*HGWVRC
Trigger: ACATCTGACCCAACCATGTCAAGCTTCCGAGTGACT...GTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTGCCTCAGCTCTGGTaGGACACTCCATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLPQLW*DTPSQK
Trigger: CTTCTGGGATGGAGTGTCTCACCAGAGCTGAGGCAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGAAGTGCTGGTCTCTaGTCTGTCCACCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGSAGL*SVHLYL
Trigger: GAGGTAGAGGTGGACAGATCAGAGACCAGCACTTCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGTCGGGTAGTTTCTTaGGCAGTCACTGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGRVVS*AVTGGD
Trigger: GTCTCCTCCAGTGACTGCTCAAGAAACTACCCGACC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTATACAGTCACAGTGTATaGGGTATCTGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVYSHSV*GIWLQI
Trigger: AATCTGCAGCCAGATACCTCATACACTGTGACTGTA...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGTCCTTCCAGTATCTaGTGTGCGTCCCCCATCACC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVCPSSI*CASPIT
Trigger: GGTGATGGGGGACGCACATCAGATACTGGAAGGACA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAAGGTGGTGCTGGGATTaGGATTGTGTAAGGTATATG +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVRWCWD*DCVRYM
Trigger: CATATACCTTACACAATCTCAATCCCAGCACCACCT...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGCTGCCCGGTGAGGTaGCCATTTGACACAGAATGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGCPVR*PFDTEC
Trigger: ACATTCTGTGTCAAATGGTCACCTCACCGGGCAGCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGGCCAGTGAAGCAGTaGCTGGTTTCTGATCCACGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVRPVKQ*LVSDPR
Trigger: GCGTGGATCAGAAACCAGTCACTGCTTCACTGGCCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGCTTTGATGCAGAAGCTTATTGCACAAATGAAACCTaGATCCCAGCAGGACTGATT +
Preference number: 4 (lower is better)
Translates to: IWCYSGIEQAAGFDAEAYCTNET*IPAGLI
Trigger: AATCAGTCCTGCTGGGATTCAGGTTTCATTTGTGCA...ATAAGCTTCTGCATCAAAGCCTGCCGCTTGCTCTATGCCGGAATAACACCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCCAAAGCCGCCTTCTTaGCCTCATCCTGGGACCGAC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNPKPPS*PHPGTD
Trigger: GTCGGTCCCAGGATGAGGTCAAGAAGGCGGCTTTGG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGCTGGGGAAAGACCCTaGCTCCAAAGATACTCCTTG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRAGERP*LQRYSL
Trigger: CAAGGAGTATCTTTGGAGTCAGGGTCTTTCCCCAGC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGCTGAATCCTGTATGCTaGGTAGCTGGGGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLLNPVC*VAGERP
Trigger: GGGTCTTTCCCCAGCTACTCAGCATACAGGATTCAG...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCCAATTGCCCCACTaGTACCTCTTTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAQLPH*YLFHLW
Trigger: CCAGAGGTGAAAGAGGTATCAGTGGGGCAATTGGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTGCCCAATTGCCCCACTaGTACCTCTTTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRAQLPH*YLFHLW
Trigger: CCAGAGGTGAAAGAGGTATCAGTGGGGCAATTGGGC...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGCCCAATTGCCCCACTaGTACCTCTTTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLAQLPH*YLFHLW
Trigger: CCAGAGGTGAAAGAGGTATCAGTGGGGCAATTGGGC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCACCGTCTTTTCCAGTaGAGCCTCTGTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVHRLFQ*SLCLLE
Trigger: CTCCAGGAGACAGAGGCTTCACTGGAAAAGACGGTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACACCGTCTTTTCCAGTaGAGCCTCTGTCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLHRLFQ*SLCLLE
Trigger: CTCCAGGAGACAGAGGCTTCACTGGAAAAGACGGTG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAGATTCAGCATCTGATTaGATCTGTTCATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLDSASD*ICSSDH
Trigger: GTGGTCAGATGAACAGATTCAATCAGATGCTGAATC...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTACAGCTGGTGGGTaGGGAACACCAGTGACTACA +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWVTAGG*GTPVTT
Trigger: TGTAGTCACTGGTGTTCCTCACCCACCAGCTGTAAC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACAAATCATCACCCGCGGTaGTGGCACTCCAGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTNHHPR*WHSSLN
Trigger: ATTAAGACTGGAGTGCCATCACCGCGGGTGATGATT...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACTATCTGACCTGTAAATaGGAATTTCAACACCTCCCC +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNYLTCK*EFQHLP
Trigger: GGGGAGGTGTTGAAATTCTCATTTACAGGTCAGATA...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGGAACTGTATCCCGTTaGTGCACTAACTTCATCTAC +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNGTVSR*CTNFIY
Trigger: GTAGATGAAGTTAGTGCATCAACGGGATACAGTTCC...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACAAGGAAAGCCAACTCTTaGCCCAGCAGATTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTRKANS*PSRFRE
Trigger: TTCACGGAATCTGCTGGGGCAAGAGTTGGCTTTCCT...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAACACTGGTGCTCGATaGTGGCTCCACCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLNTGAR*WLHHSD
Trigger: GTCACTGTGGTGGAGCCAGCATCGAGCACCAGTGTT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAATTTGCCCGGCCGATaGTCCATGATCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRNLPGR*SMIHPP
Trigger: TGGTGGATGGATCATGGAGCATCGGCCGGGCAAATT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACATCTGCCACATTGTATaGATGGGTATCATCAGGATC +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHICHIV*MGIIRI
Trigger: GATCCTGATGATACCCATGCATACAATGTGGCAGAT...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGCTCCTCCCACAGGCTaGCACTGCACATGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNAPPTG*HCTCMV
Trigger: CACCATGCATGTGCAGTGGCAGCCTGTGGGAGGAGC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGAGCCTGGACTGTGACTaGATACTCCGTGTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLSLDCD*ILRVGN
Trigger: GTTCCCAACACGGAGTATGCAGTCACAGTCCAGGCT...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTCACTAGTGAGGTCGTaGAGGACAGCCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRSLVRS*RTAWTV
Trigger: CACAGTCCAGGCTGTCCTGCACGACCTCACTAGTGA...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCACTAGTGAGGTCGTaGAGGACAGCCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSLVRS*RTAWTV
Trigger: CACAGTCCAGGCTGTCCTGCACGACCTCACTAGTGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATCACTAGTGAGGTCGTaGAGGACAGCCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSLVRS*RTAWTV
Trigger: CACAGTCCAGGCTGTCCTGCACGACCTCACTAGTGA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGAGGACCACACTGTTCTaGCGTCCTCCTATTGTGGTC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWRTTLF*RPPIVV
Trigger: GACCACAATAGGAGGACGGCAGAACAGTGTGGTCCT...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAGGACCACACTGTTCTaGCGTCCTCCTATTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRRTTLF*RPPIVV
Trigger: GACCACAATAGGAGGACGGCAGAACAGTGTGGTCCT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGACGAGGATTTCCCTCTaGATGGTCCCAGCGGACATT +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWTRISL*MVPADI
Trigger: AATGTCCGCTGGGACCATGCAGAGGGAAATCCTCGT...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTTCCTCTGGACCACCTaGTGCTGGTGCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRFLWTT*CWCIEE
Trigger: CTCTTCTATGCACCAGCAGCAGGTGGTCCAGAGGAA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGTATGAGGTATCTGGCTaGAGATTCCTAAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKYEVSG*RFLRMA
Trigger: TGCCATTCTTAGGAATCTGCAGCCAGATACCTCATA...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCTCCAGATGCACCATaGGCGTGTTTCCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAPDAP*ACFLAL
Trigger: TAGTGCCAGGAAACACGCGCATGGTGCATCTGGAGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGATCAGCCGCTCCAGATaGACCATGCGCGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVISRSR*TMRVFP
Trigger: AGGAAACACGCGCATGGTGCATCTGGAGCGGCTGAT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACACTGAACCCTGACTaGTGGATGACCAAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTLNPD*WMTKAA
Trigger: GGCGGCTTTGGTCATCCAGCAGTCAGGGTTCAGTGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAACACTGAACCCTGACTaGTGGATGACCAAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLTLNPD*WMTKAA
Trigger: GGCGGCTTTGGTCATCCAGCAGTCAGGGTTCAGTGT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAATCCACAATGAACACGTaGCGTTCACTTGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQSTMNT*RSLGLL
Trigger: CAGCAAACCAAGTGAACGGCACGTGTTCATTGTGGA...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTCTTGCTAGAAGGATCTaGAATCACTCCAACTTGTGG +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNALARRI*NHSNLW
Trigger: CCACAAGTTGGAGTGATTGCAGATCCTTCTAGCAAG...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACCAGGGGGCCCAATTaGCCCACTGATACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTRGPN*PTDTSF
Trigger: GAAAGAGGTATCAGTGGGGCAATTGGGCCCCCTGGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAACCAGGGGGCCCAATTaGCCCACTGATACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLTRGPN*PTDTSF
Trigger: GAAAGAGGTATCAGTGGGGCAATTGGGCCCCCTGGT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCCCTGGGTCCCATTaGACCGTCTTTTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAPGSH*TVFSSE
Trigger: TTCACTGGAAAAGACGGTGCAATGGGACCCAGGGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACACAGATGGACCTGGTCTaGCATGATCTCCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTQMDLV*HDLQVF
Trigger: GAAAACCTGGAGATCATGGCAGACCAGGTCCATCTG...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACTTCACAGACTTGTCTTaGAACTGCTCGCATCATGTT +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHFTDLS*NCSHHV
Trigger: AACATGATGCGAGCAGTTGCAAGACAAGTCTGTGAA...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCACTCTGCAGGCTCGTCTaGGCCGTAGTCCTCGTATTC +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSLCRLV*AVVLVF
Trigger: GAATACGAGGACTACGGCGCAGACGAGCCTGCAGAG...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGCCACATTGAAAACATaGTTCAGTGAAGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVATLKT*FSEGVE
Trigger: CTCCACACCTTCACTGAACCATGTTTTCAATGTGGC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGGTCTCATGCCAGCTTaGGTCCTGAAGTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRGLMPA*VLKFCW
Trigger: CCAACAGAACTTCAGGACCCAAGCTGGCATGAGACC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCACACTGTCAGAAGGTaGTGTCCAGCTCACTCTAAA +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRHTVRR*CPAHSK
Trigger: TTTAGAGTGAGCTGGACACCACCTTCTGACAGTGTG...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTCGTGCAGGACAGCCTaGACTGTGACTGCATACTCC +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRSCRTA*TVTAYS
Trigger: GGAGTATGCAGTCACAGTCCAGGCTGTCCTGCACGA...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCGTGCAGGACAGCCTaGACTGTGACTGCATACTCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSCRTA*TVTAYS
Trigger: GGAGTATGCAGTCACAGTCCAGGCTGTCCTGCACGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCTTGAGCAGTCACTaGAGGAGACTCCCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFLSSH*RRLPLV
Trigger: GACGAGGGGGAGTCTCCTCCAGTGACTGCTCAAGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGAGTGTAAGGAGTGTCTaGCTTCAGTTTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRSVRSV*LQFLQD
Trigger: GTCCTGCAGAAACTGAAGCCAGACACTCCTTACACT...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGGATTTCCCTCTGCATaGTCCCAGCGGACATTCAAG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRGFPSA*SQRTFK
Trigger: CTTGAATGTCCGCTGGGACCATGCAGAGGGAAATCC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGTATTCCCGGGGATTaGTACCAGTTCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGIPGD*YQFLWT
Trigger: GGTCCAGAGGAACTGGTACCAATCCCCGGGAATACC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACTTGCAGCACAGGTCCTaGAGCAGGGTCCCAGCGAAC +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHLQHRS*SRVPAN
Trigger: GTTCGCTGGGACCCTGCTCCAGGACCTGTGCTGCAA...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGGGTATATTCATCAATTaGATCACCAACAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVGIFIN*ITNSGR
Trigger: TCTCCCACTGTTGGTGATCCAATTGATGAATATACC...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCTGTACCTAATATTCTaGAGGGCCCCAAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRLYLIF*RAPRAR
Trigger: CCTAGCCCTTGGGGCCCTCCAGAATATTAGGTACAG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCTTGACCTCATCCTaGGACCGACCGTCCGTGACC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFLTSS*DRPSVT
Trigger: GGTCACGGACGGTCGGTCCCAGGATGAGGTCAAGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTCTGAACCCTGACTGCTaGATGACCAAAGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRLNPDC*MTKAAF
Trigger: GAAGGCGGCTTTGGTCATCCAGCAGTCAGGGTTCAG...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGAACCCTGACTGCTaGATGACCAAAGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLNPDC*MTKAAF
Trigger: GAAGGCGGCTTTGGTCATCCAGCAGTCAGGGTTCAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACATGTATGCTGAGTAGCTaGGGAAAGACCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTCMLSS*GKTLTP
Trigger: TGGAGTCAGGGTCTTTCCCCAGCTACTCAGCATACA...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGACAATGTCAAAACTCTaGATTTGGAATGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVTMSKL*IWNAAD
Trigger: ATCAGCCGCATTCCAAATCCAGAGTTTTGACATTGT...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTTCTACTGGTCCACACTaGACTGCAGACAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNASTGPH*TADNVK
Trigger: TTTGACATTGTCTGCAGTCCAGTGTGGACCAGTAGA...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCACCTTTCATCCCTTaGCGACCTTGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSPFIP*RPCSPG
Trigger: TCCGGGAGAGCAAGGTCGCCAAGGGATGAAAGGTGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCGGCCTGGAAGTCCTaGCTCTCCAGCATCACCTTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSAWKS*LSSITF
Trigger: AAAGGTGATGCTGGAGAGCCAGGACTTCCAGGCCGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTCGGCCTGGAAGTCCTaGCTCTCCAGCATCACCTTT +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRSAWKS*LSSITF
Trigger: AAAGGTGATGCTGGAGAGCCAGGACTTCCAGGCCGA...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAACCCAGATGGACCTaGTCTGCCATGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQPRWT*SAMISR
Trigger: CCTGGAGATCATGGCAGACCAGGTCCATCTGGGTTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACCTGTGGACCCTGGTaGACCTGTTCTGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTCGPW*TCSGFS
Trigger: GGAGAATCCAGAACAGGTCCACCAGGGTCCACAGGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGACCTCTTGAACCTGTaGACCCTGGTGGACCTGTTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVDLLNL*TLVDLF
Trigger: GAACAGGTCCACCAGGGTCCACAGGTTCAAGAGGTC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCGTTGTATGGGATGCTaGCACACTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRRCMGC*HTEKNH
Trigger: GTGATTCTTCTCAGTGTGCCAGCATCCCATACAACG...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCTTGCCCGTTGTATaGGATGCTGGCACACTGAGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVALPVV*DAGTLR
Trigger: TCTCAGTGTGCCAGCATCCCATACAACGGGCAAGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGCTGAGTTACAGCTGGTaGGTGAGGAACACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMLSYSW*VRNTSD
Trigger: GTCACTGGTGTTCCTCACCCACCAGCTGTAACTCAG...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAAAACTGAGTTACAGCTaGTGGGTGAGGAACACCAGT +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEKLSYS*WVRNTS
Trigger: ACTGGTGTTCCTCACCCACCAGCTGTAACTCAGTTT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAAATTATGGCATGATTTaGAAGGCACACACACACACA +
Preference number: 4 (lower is better)
Translates to: QTACLELGFLQKQGSLQSNYGMI*KAHTHT
Trigger: TGTGTGTGTGTGTGCCTTCCAAATCATGCCATAATT...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTTATATCCACACCACGTaGGCATTCCACTTGAACTTT +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNAYIHTT*AFHLNF
Trigger: AAAGTTCAAGTGGAATGCTCACGTGGTGTGGATATA...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACACAATAGCTTCCAATTCTaGGCGAACGGCATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LCPIQHYNYGMIWKAHTHNSFQF*ANGILH
Trigger: GTGAAGGATGCCGTTCGCTCAGAATTGGAAGCTATT...GTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACGAGACCAGTTGGTTTTaGAACCATAAGAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHETSWF*NHKKSL
Trigger: AAGTGACTTCTTATGGTTTCAAAACCAACTGGTCTC...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCTGGCTTCAGGCTGCTaGGAACAACACTGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNLASGC*EQHWCS
Trigger: CGAGCACCAGTGTTGTTCTCAGCAGCCTGAAGCCAG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATACTCCGCAGTCACATTaGCCAAATACAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDTPQSH*PNTRSL
Trigger: CAGAGACCTTGTATTTGGTCAATGTGACTGCGGAGT...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATATCTCCCCTCACAGTaGCCTCTTGAGTTTCACCCC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLYLPSQ*PLEFHP
Trigger: GGGGTGAAACTCAAGAGGTCACTGTGAGGGGAGATA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGATTTTCTATCATCGTATaGATTGCATCTTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: DCVLGARLPAETRFSTIRFSIIV*IASSGR
Trigger: TCTGCCTGAAGATGCAATTCATACGATGATAGAAAA...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGACAACACGGTAGTTaGCGACTTTCCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLRQHGS*RLSLVL
Trigger: CAGCACCAGGGAAAGTCGTCAACTACCGTGTTGTCT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGCTGAGTTTCAGATCCTaGGGTCTGGGTAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWLSFRS*GLGKGK
Trigger: CTTGCCTTTACCCAGACCTCAGGATCTGAAACTCAG...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGTGAGAAGAGGTCTTTaGGGGAAGTGCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVVRRGL*GKCWSL
Trigger: CAGAGACCAGCACTTCCCTCAAAGACCTCTTCTCAC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGTGAGAAGAGGTCTTTaGGGGAAGTGCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLVRRGL*GKCWSL
Trigger: CAGAGACCAGCACTTCCCTCAAAGACCTCTTCTCAC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGGTCGGGTAGTTTCTTaGGCAGTCACTGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSGRVVS*AVTGGD
Trigger: GTCTCCTCCAGTGACTGCTCAAGAAACTACCCGACC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGGTCTCCATCTTATCTaGGCTTCCAAAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRGLHLI*ASKRCP
Trigger: TGGGCACCTTTTGGAAGCTCAGATAAGATGGAGACC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATGTCCTTCCAGTATCTaGTGTGCGTCCCCCATCACC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSCPSSI*CASPIT
Trigger: GGTGATGGGGGACGCACATCAGATACTGGAAGGACA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGGTGAGGTGACCATTTaGCACAGAATGTATCCCACC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWGEVTI*HRMYPT
Trigger: GGTGGGATACATTCTGTGTCAAATGGTCACCTCACC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGGGCTGCCCGGTGAGGTaGCCATTTGACACAGAATGT +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKGCPVR*PFDTEC
Trigger: ACATTCTGTGTCAAATGGTCACCTCACCGGGCAGCC...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAAGGCCAGTGAAGCAGTaGCTGGTTTCTGATCCACGC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSRPVKQ*LVSDPR
Trigger: GCGTGGATCAGAAACCAGTCACTGCTTCACTGGCCT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGCATTTTAAAACCTGGTaGGGTGTAGCCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKHFKTW*GVAIQI
Trigger: TATTTGGATGGCTACACCTCACCAGGTTTTAAAATG...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCTGGGGAAAGACCCTaGCTCCAAAGATACTCCTTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAGERP*LQRYSL
Trigger: CAAGGAGTATCTTTGGAGTCAGGGTCTTTCCCCAGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGAATCCTGTATGCTaGGTAGCTGGGGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLNPVC*VAGERP
Trigger: GGGTCTTTCCCCAGCTACTCAGCATACAGGATTCAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGGGATGCTGGCACACTaGGAAGAATCACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRGMLAH*EESQYP
Trigger: TGGATACTGTGATTCTTCTCAGTGTGCCAGCATCCC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAAAAAGACAGATGCCCTaGATCAGACACATCGCTAAC +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEKRQMP*IRHIAN
Trigger: GTTAGCGATGTGTCTGATTCAGGGCATCTGTCTTTT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAGGAAAGCCAACTCTTaGCCCAGCAGATTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRRKANS*PSRFRE
Trigger: TTCACGGAATCTGCTGGGGCAAGAGTTGGCTTTCCT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGGGATCCCGGCTGTATTaGACAAGACTAATCTGGACC +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLGSRLY*TRLIWT
Trigger: GGTCCAGATTAGTCTTGTGCAATACAGCCGGGATCC...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAATTTGCCCGGCCGATaGTCCATGATCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVNLPGR*SMIHPP
Trigger: TGGTGGATGGATCATGGAGCATCGGCCGGGCAAATT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGCCTGGACTGTGACTaGATACTCCGTGTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSLDCD*ILRVGN
Trigger: GTTCCCAACACGGAGTATGCAGTCACAGTCCAGGCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGCCTGGACTGTGACTaGATACTCCGTGTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSLDCD*ILRVGN
Trigger: GTTCCCAACACGGAGTATGCAGTCACAGTCCAGGCT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGCCCCTCGTCATGTACTaGAGAAACGCTGACTGTGTA +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLPLVMY*RNADCV
Trigger: TACACAGTCAGCGTTTCTGCAGTACATGACGAGGGG...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCCCCTCGTCATGTACTaGAGAAACGCTGACTGTGTA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRPLVMY*RNADCV
Trigger: TACACAGTCAGCGTTTCTGCAGTACATGACGAGGGG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGGTCGTTTGCTCATTaGCTTCCCCTGTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVWSFAH*LPLWKA
Trigger: AGCCTTCCACAGGGGAAGGCAATGAGCAAACGACCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATGGTCGTTTGCTCATTaGCTTCCCCTGTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLWSFAH*LPLWKA
Trigger: AGCCTTCCACAGGGGAAGGCAATGAGCAAACGACCA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCCTATTGTGGTCGTTTaGTCATTGCCTTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRPIVVV*SLPSPV
Trigger: CACAGGGGAAGGCAATGAGCAAACGACCACAATAGG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGGACCACACTGTTCTaGCGTCCTCCTATTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVRTTLF*RPPIVV
Trigger: GACCACAATAGGAGGACGGCAGAACAGTGTGGTCCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTCTGGCTTCAGTTTCTaGAGGACCACACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSGFSF*RTTLFC
Trigger: GCAGAACAGTGTGGTCCTGCAGAAACTGAAGCCAGA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACGAGGATTTCCCTCTaGATGGTCCCAGCGGACATT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTRISL*MVPADI
Trigger: AATGTCCGCTGGGACCATGCAGAGGGAAATCCTCGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCCTCTGGACCACCTaGTGCTGGTGCATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFLWTT*CWCIEE
Trigger: CTCTTCTATGCACCAGCAGCAGGTGGTCCAGAGGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTACACAACGCGATATTaGAGCACAGGTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRYTTRY*STGPGA
Trigger: TGCTCCAGGACCTGTGCTGCAATATCGCGTTGTGTA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCAGCCGCTCCAGATaGACCATGCGCGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSISRSR*TMRVFP
Trigger: AGGAAACACGCGCATGGTGCATCTGGAGCGGCTGAT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACAAATTATCGTCCCCAATaGTCCAGGAGGCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTNYRPQ*SRRHQS
Trigger: TGACTGATGCCTCCTGGAGCATTGGGGACGATAATT...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGGACATTCTTCCTCATaGCGCTCTCCCAAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWGHSSS*RSPKSR
Trigger: TCTTGACTTGGGAGAGCGGCATGAGGAAGAATGTCC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGCCGTTCACTTGGTTTaGTGGCAATGTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWAVHLV*WQCWQA
Trigger: AGCTTGCCAACATTGCCAGCAAACCAAGTGAACGGC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCAGATGGACCTGGTCTaGCATGATCTCCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRQMDLV*HDLQVF
Trigger: GAAAACCTGGAGATCATGGCAGACCAGGTCCATCTG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGCGGGCCTGGCTGGTTaGGACTGGACTGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNAGLAG*DWTGNH
Trigger: ATGATTACCAGTCCAGTCGCAACCAGCCAGGCCCGC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGCCCGTTGTATGGGATaGTGGCACACTGAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRARCMG*WHTEKN
Trigger: ATTCTTCTCAGTGTGCCAGCATCCCATACAACGGGC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGCTTTGATGCAGAAGCTTATTTGAAATGGGTTCACTaGATGTCATTCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: IWCYSGIEQAAGFDAEAYLKWVH*MSFPSW
Trigger: CCATGAAGGGAATGACATCCAGTGAACCCATTTCAA...ATAAGCTTCTGCATCAAAGCCTGCCGCTTGCTCTATGCCGGAATAACACCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATACTGGTGCTCGATGCTaGCTCCACCACAGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNTGARC*LHHSDL
Trigger: GAGGTCACTGTGGTGGAGCCAGCATCGAGCACCAGT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACCTCCTCTGATTGGGTaGGGTGGTAACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLPPLIG*GGNFSA
Trigger: AGCAGAGAAGTTACCACCCCACCCAATCAGAGGAGG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTTGGAAGGCACACACACACACACACAGCAAAAGCTAAATCATCACCCGCGGTGTTCATATTTCGTGTCTaGAATCAAGTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FGRHTHTHTAKAKSSPAVFIFRV*NQVLQC
Trigger: ACACTGGAGAACTTGATTCCAGACACGAAATATGAA...CACCGCGGGTGATGATTTAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGACCGCGAACCATTCCTaGAGCAGATGTCCAATAAGC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRTANHS*SRCPIS
Trigger: GCTTATTGGACATCTGCTCCAGGAATGGTTCGCGGT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGCAATTTGTACTCTTTTaGGGCCAATGTCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: QEMRRFHLVLFRHRASGRQFVLF*GQCQRL
Trigger: AAGTCTTTGACATTGGCCCCAAAAGAGTACAAATTG...CCTGCCGCTTGCTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGTCTCATGCCAGCTTaGGTCCTGAAGTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGLMPA*VLKFCW
Trigger: CCAACAGAACTTCAGGACCCAAGCTGGCATGAGACC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATCGTGCAGGACAGCCTaGACTGTGACTGCATACTCC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSSCRTA*TVTAYS
Trigger: GGAGTATGCAGTCACAGTCCAGGCTGTCCTGCACGA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCATTCTTGAGCAGTCACTaGAGGAGACTCCCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSFLSSH*RRLPLV
Trigger: GACGAGGGGGAGTCTCCTCCAGTGACTGCTCAAGAA...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCTTGAGCAGTCACTaGAGGAGACTCCCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFLSSH*RRLPLV
Trigger: GACGAGGGGGAGTCTCCTCCAGTGACTGCTCAAGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGATTTCCCTCTGCATaGTCCCAGCGGACATTCAAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGFPSA*SQRTFK
Trigger: CTTGAATGTCCGCTGGGACCATGCAGAGGGAAATCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGTGGACCACCTGCTGCTaGTGCATAGAAGAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMWTTCC*CIEELV
Trigger: TACAAGCTCTTCTATGCACCAGCAGCAGGTGGTCCA...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGGTATTCCCGGGGATTaGTACCAGTTCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSGIPGD*YQFLWT
Trigger: GGTCCAGAGGAACTGGTACCAATCCCCGGGAATACC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCTGTACTGCTGAACTaGCCCATCAGCATGATCCCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPVLLN*PISMIP
Trigger: TGGGATCATGCTGATGGGCCAGTTCAGCAGTACAGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACATTGTTTCTTCTGCCTaGGACTGTGGTATATTCATC +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNIVSSA*DCGIFI
Trigger: GATGAATATACCACAGTCCCAGGCAGAAGAAACAAT...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGTACCTAATATTCTaGAGGGCCCCAAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLYLIF*RAPRAR
Trigger: CCTAGCCCTTGGGGCCCTCCAGAATATTAGGTACAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTCTGTACCTAATATTCTaGAGGGCCCCAAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRLYLIF*RAPRAR
Trigger: CCTAGCCCTTGGGGCCCTCCAGAATATTAGGTACAG...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTGAACCCTGACTGCTaGATGACCAAAGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLNPDC*MTKAAF
Trigger: GAAGGCGGCTTTGGTCATCCAGCAGTCAGGGTTCAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCACGTGCCGTTCACTTaGTTTGCTGGCAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVHVPFT*FAGNVG
Trigger: GCCAACATTGCCAGCAAACCAAGTGAACGGCACGTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACACGTGCCGTTCACTTaGTTTGCTGGCAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLHVPFT*FAGNVG
Trigger: GCCAACATTGCCAGCAAACCAAGTGAACGGCACGTG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAATCTACTGGTCCACACTaGACTGCAGACAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQSTGPH*TADNVK
Trigger: TTTGACATTGTCTGCAGTCCAGTGTGGACCAGTAGA...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGTCACCTTTCATCCCTTaGCGACCTTGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKSPFIP*RPCSPG
Trigger: TCCGGGAGAGCAAGGTCGCCAAGGGATGAAAGGTGA...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACAACCCAGATGGACCTaGTCTGCCATGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSQPRWT*SAMISR
Trigger: CCTGGAGATCATGGCAGACCAGGTCCATCTGGGTTG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGCTCGCATCATGTTCTaGGAAGCAATGTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWARIMF*EAMSPL
Trigger: TAGGGGAGACATTGCTTCCCAGAACATGATGCGAGC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCACCTTTCTCTCCTaGCAAACCTCGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFTFLS*QTSFPR
Trigger: CCTGGGGAACGAGGTTTGCCAGGAGAGAAAGGTGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGGTGGACCTGTTCTaGATTCTCCTTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLVDLF*ILLVDL
Trigger: CAGGTCCACAAGGAGAATCCAGAACAGGTCCACCAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGACCTCTTGAACCTGTaGACCCTGGTGGACCTGTTC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSDLLNL*TLVDLF
Trigger: GAACAGGTCCACCAGGGTCCACAGGTTCAAGAGGTC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGCCTTGCCCGTTGTATaGGATGCTGGCACACTGAGA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSALPVV*DAGTLR
Trigger: TCTCAGTGTGCCAGCATCCCATACAACGGGCAAGGC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGTGTTAGCCGGAACCTaGATAGCCTTGCCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVVLAGT*IALPVV
Trigger: TACAACGGGCAAGGCTATCCAGGTTCCGGCTAACAC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTTCAACATTACAATTATaGCATGATTTGGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVSTLQL*HDLEGT
Trigger: TGTGCCTTCCAAATCATGCCATAATTGTAATGTTGA...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGAACTGGTTTTGCCCATaGCATATGAACAGTATTTTC +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKNWFCP*HMNSIF
Trigger: GAAAATACTGTTCATATGTCATGGGCAAAACCAGTT...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACTTCAGTGGTACTAGCTaGAAGGGTAAATTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNFSGTS*KGKFFS
Trigger: ACTAAAGAATTTACCCTTTCAGCTAGTACCACTGAA...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGAATCAGTCCAGGCACTaGCAGAGCATTTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRNQSRH*QSIFVS
Trigger: AGATACAAAAATGCTCTGTCAGTGCCTGGACTGATT...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACAGTCTTCTCCATTATTaGAATGGGTTCACTGGATGT +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNSLLHY*NGFTGC
Trigger: ACATCCAGTGAACCCATTTCAATAATGGAGAAGACT...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGAAAGTGAACTCAGTATaGGGATCCCGGCTGTATTGC +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMKVNSV*GSRLYC
Trigger: GCAATACAGCCGGGATCCTCATACTGAGTTCACTTT...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAAAGTGAACTCAGTATaGGGATCCCGGCTGTATTGC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRKVNSV*GSRLYC
Trigger: GCAATACAGCCGGGATCCTCATACTGAGTTCACTTT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTGGCACATTGCTTCTTaGTCCCTTGCTAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRWHIAS*SLARHK
Trigger: TTTGTGCCTAGCAAGGGATCAAGAAGCAATGTGCCA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGACTCCGCAGTCACATTaGCCAAATACAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRTPQSH*PNTRSL
Trigger: CAGAGACCTTGTATTTGGTCAATGTGACTGCGGAGT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAAGTGTTCTCCTCCTCTaGTTGGGTGGGGTGGTAACT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSSVLLL*LGGVVT
Trigger: AGTTACCACCCCACCCAATCAGAGGAGGAGAACACT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGAGAAGCTGTTGTTCCTaGTCCTTGCCTAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWRSCCS*SLPKLS
Trigger: GGAAAGCTTAGGCAAGGATCAGGAACAACAGCTTCT...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATCACTATCCTGGAGAGTaGCTCAAAATCTGCCACATT +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDHYPGE*LKICHI
Trigger: AATGTGGCAGATTTTGAGTCACTCTCCAGGATAGTG...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGAGTTTCAGATCCTaGGGTCTGGGTAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLSFRS*GLGKGK
Trigger: CTTGCCTTTACCCAGACCTCAGGATCTGAAACTCAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGTACTGCAGAAACGCTaGCTGTGTACAAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVVLQKR*LCTRSV
Trigger: CACAGACCTTGTACACAGTCAGCGTTTCTGCAGTAC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGTCTCCATCTTATCTaGGCTTCCAAAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGLHLI*ASKRCP
Trigger: TGGGCACCTTTTGGAAGCTCAGATAAGATGGAGACC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCAGGTCATCACTTTCTaGCTCATCAGGATAGATGGC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRQVITF*LIRIDG
Trigger: GCCATCTATCCTGATGAGTCAGAAAGTGATGACCTG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGCACTACTATAGATTCTaGGGGTCTTGTGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWHYYRF*GSCAIH
Trigger: GTGGATGGCACAAGACCCTCAGAATCTATAGTAGTG...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGTGAGGTGACCATTTaGCACAGAATGTATCCCACC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGEVTI*HRMYPT
Trigger: GGTGGGATACATTCTGTGTCAAATGGTCACCTCACC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGGTGAGGTGACCATTTaGCACAGAATGTATCCCACC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLGEVTI*HRMYPT
Trigger: GGTGGGATACATTCTGTGTCAAATGGTCACCTCACC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGGCTGCCCGGTGAGGTaGCCATTTGACACAGAATGT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNGCPVR*PFDTEC
Trigger: ACATTCTGTGTCAAATGGTCACCTCACCGGGCAGCC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAATCTGCACAAAAACAGTaGCACCATAATCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FLQKQGSLQSERVLLDEQSAQKQ*HHNQCL
Trigger: CAGACACTGATTATGGTGTCACTGTTTTTGTGCAGA...TTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGAATCCCAGCAGGACTaGTTTCATCAAAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVESQQD*FHQSLP
Trigger: TGGGAGGCTTTGATGAAATCAGTCCTGCTGGGATTC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGGCTGTATTGCACAAATaGAACCTGAATCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLAVLHK*NLNPSR
Trigger: CCTGCTGGGATTCAGGTTTCATTTGTGCAATACAGC...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGCTGTATTGCACAAATaGAACCTGAATCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRAVLHK*NLNPSR
Trigger: CCTGCTGGGATTCAGGTTTCATTTGTGCAATACAGC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAAAGACACTGAACCCTaGCTGCTGGATGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVKDTEP*LLDDQS
Trigger: GCTTTGGTCATCCAGCAGTCAGGGTTCAGTGTCTTT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAAAGTCGTCCACAATaGACACGTGCCGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQSRPQ*TRAVHL
Trigger: CAAGTGAACGGCACGTGTTCATTGTGGACGACTTTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTGAATCCTGTATGCTaGGTAGCTGGGGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLNPVC*VAGERP
Trigger: GGGTCTTTCCCCAGCTACTCAGCATACAGGATTCAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATGATTTGGAATGCGGCTaGTTTCCTTTCCCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDDLECG*FPFPFK
Trigger: CTTAAAGGGGAAAGGAAATCAGCCGCATTCCAAATC...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGGATGCTGGCACACTaGGAAGAATCACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGMLAH*EESQYP
Trigger: TGGATACTGTGATTCTTCTCAGTGTGCCAGCATCCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGATGAGGAGGTGGGTGAGGAACACCAGTaGCTACAGCAAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: FMPSNSSIQRTTWKDEEVGEEHQ*LQQNRK
Trigger: CTTCCTGTTTTGCTGTAGTCACTGGTGTTCCTCACC...CACCTCCTCATCTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTATTACAATTATGGCATaGTTTGGAAGGCACACACAC +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNAITIMA*FGRHTH
Trigger: GTGTGTGTGCCTTCCAAATCATGCCATAATTGTAAT...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGTGCTGTCGGCTTCCTaGAGTCATTGGTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSVLSAS*SHWCED
Trigger: ATCCTCACACCAATGACTGCAGGAAGCCGACAGCAC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAGCAACACAATGTCTaGCTCAGCTCTGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQQHNV*LSSGET
Trigger: TGTCTCACCAGAGCTGAGGCAGACATTGTGTTGCTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACAGCAACACAATGTCTaGCTCAGCTCTGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLQQHNV*LSSGET
Trigger: TGTCTCACCAGAGCTGAGGCAGACATTGTGTTGCTG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGACAAGGTCAGTCAGCTaGATGTCATTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMTRSVS*MSFTVG
Trigger: GCCAACAGTGAATGACATGCAGCTGACTGACCTTGT...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGACAAGGTCAGTCAGCTaGATGTCATTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRTRSVS*MSFTVG
Trigger: GCCAACAGTGAATGACATGCAGCTGACTGACCTTGT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCCCTCGTCATGTACTaGAGAAACGCTGACTGTGTA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPLVMY*RNADCV
Trigger: TACACAGTCAGCGTTTCTGCAGTACATGACGAGGGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCAGTGTGCGCTCACTaGCAATCAGGTCATCACTTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAVCAH*QSGHHF
Trigger: AAAGTGATGACCTGATTGGCAGTGAGCGCACACTGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCATGGTCGTTTGCTCATTaGCTTCCCCTGTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSWSFAH*LPLWKA
Trigger: AGCCTTCCACAGGGGAAGGCAATGAGCAAACGACCA...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCTATTGTGGTCGTTTaGTCATTGCCTTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPIVVV*SLPSPV
Trigger: CACAGGGGAAGGCAATGAGCAAACGACCACAATAGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCTGGCTTCAGTTTCTaGAGGACCACACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSGFSF*RTTLFC
Trigger: GCAGAACAGTGTGGTCCTGCAGAAACTGAAGCCAGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCCAGTATCTGATGTaGGTCCCCCATCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFQYLM*VPHHLQ
Trigger: CTGAAGGTGATGGGGGACGCACATCAGATACTGGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATTCCAGTATCTGATGTaGGTCCCCCATCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLFQYLM*VPHHLQ
Trigger: CTGAAGGTGATGGGGGACGCACATCAGATACTGGAA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTACACAACGCGATATTaGAGCACAGGTCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVYTTRY*STGPGA
Trigger: TGCTCCAGGACCTGTGCTGCAATATCGCGTTGTGTA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGACATTCTTCCTCATaGCGCTCTCCCAAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGHSSS*RSPKSR
Trigger: TCTTGACTTGGGAGAGCGGCATGAGGAAGAATGTCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCGTTCACTTGGTTTaGTGGCAATGTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAVHLV*WQCWQA
Trigger: AGCTTGCCAACATTGCCAGCAAACCAAGTGAACGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGTCCACAATGAACACGTaGCGTTCACTTGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMSTMNT*RSLGLL
Trigger: CAGCAAACCAAGTGAACGGCACGTGTTCATTGTGGA...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTCCACAATGAACACGTaGCGTTCACTTGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSTMNT*RSLGLL
Trigger: CAGCAAACCAAGTGAACGGCACGTGTTCATTGTGGA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAATGTGATTTGCCAAATTaGAAAAGGGTCACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEECDLPN*KRVTGS
Trigger: ACTCCCAGTGACCCTTTTGCAATTTGGCAAATCACA...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTTGTCCTGTGTACATGTaGAAGAATTTGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNACPVYM*KNLEKQ
Trigger: CTGCTTTTCCAAATTCTTGCACATGTACACAGGACA...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGCCCCTGGGTCCCATTaGACCGTCTTTTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNAPGSH*TVFSSE
Trigger: TTCACTGGAAAAGACGGTGCAATGGGACCCAGGGGC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAGATGGACCTGGTCTaGCATGATCTCCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQMDLV*HDLQVF
Trigger: GAAAACCTGGAGATCATGGCAGACCAGGTCCATCTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTCAGATGGACCTGGTCTaGCATGATCTCCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRQMDLV*HDLQVF
Trigger: GAAAACCTGGAGATCATGGCAGACCAGGTCCATCTG...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCCGTTGTATGGGATaGTGGCACACTGAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVARCMG*WHTEKN
Trigger: ATTCTTCTCAGTGTGCCAGCATCCCATACAACGGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTATTCCTAATAAGCACGTaGGCAAACATCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVFLIST*ANISET
Trigger: TGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAA...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACAGGAAGATAAGTAATTaGAATGGAGTTGACGTTTCC +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHRKISN*NGVDVS
Trigger: GGAAACGTCAACTCCATTGCAATTACTTATCTTCCT...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACACTCCATCCCTTCTaGCTCAATGGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTLHPF*LNGRQE
Trigger: CTCCTGTCTTCCATTGAGGCAGAAGGGATGGAGTGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345356.10
CDS-3UTR CCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACAGCTTCCTGCAGTCATTaGTGTGAGGATGACTTTGTA +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTASCSH*CEDDFV
Trigger: TACAAAGTCATCCTCACACCAATGACTGCAGGAAGC...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGCGGAAACACTGATCTaGTATTCTGTGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRAETLI*YSVSAE
Trigger: CTCAGCAGACACAGAATACCAGATCAGTGTTTCCGC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTATGCACAAGACTAATCTaGACCCTATTTGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLCTRLI*TLFGEI
Trigger: AATTTCACCAAATAGGGTCCAGATTAGTCTTGTGCA...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCTCCACCAGCAACTaGTCTATATATAATTCGATA +
Preference number: 4 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHLSTSN*SIYNSI
Trigger: TATCGAATTATATATAGACCAGTTGCTGGTGGAGAG...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGTGCTTCCAAATCACCTaGACCTTTGACACTGTTACA +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRCFQIT*TFDTVT
Trigger: TGTAACAGTGTCAAAGGTCCAGGTGATTTGGAAGCA...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGTTTCCCTCCAGAAACTaGATAGTATTCCACCTTATA +
Preference number: 4 (lower is better)
Translates to: CVLGARLPAETRFSTIRKFPSRN*IVFHLI
Trigger: TATAAGGTGGAATACTATCCAGTTTCTGGAGGGAAA...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCAAACGCACCTCTTTaGGTCTTGTTGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPNAPL*VLLALC
Trigger: ACACAGAGCCAACAAGACCCAAAGAGGTGCGTTTGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACCAAACGCACCTCTTTaGGTCTTGTTGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLPNAPL*VLLALC
Trigger: ACACAGAGCCAACAAGACCCAAAGAGGTGCGTTTGG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGCATGTCATTCACTGTTaGCCCCAAACGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMHVIHC*PQTHLF
Trigger: AAAGAGGTGCGTTTGGGGCCAACAGTGAATGACATG...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCATGTCATTCACTGTTaGCCCCAAACGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRHVIHC*PQTHLF
Trigger: AAAGAGGTGCGTTTGGGGCCAACAGTGAATGACATG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGCATACTCCGTGTTaGGAACAAGGTCAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLHTPC*EQGQSA
Trigger: AGCTGACTGACCTTGTTCCCAACACGGAGTATGCAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATTTCGTGGGCCACTTTTaGGAGCTTGTGTTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDFVGHF*ELVLLR
Trigger: TCTTAACAACACAAGCTCCCAAAAGTGGCCCACGAA...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGGACCACCTGCTGCTaGTGCATAGAAGAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVWTTCC*CIEELV
Trigger: TACAAGCTCTTCTATGCACCAGCAGCAGGTGGTCCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATCTACCGAGAGGCTATTaGTTGTTTCACCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDLPRGY*LFHQRL
Trigger: GAGTCTTTGGTGAAACAACCAATAGCCTCTCGGTAG...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACCTGTACTGCTGAACTaGCCCATCAGCATGATCCCA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSPVLLN*PISMIP
Trigger: TGGGATCATGCTGATGGGCCAGTTCAGCAGTACAGG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAAACAGTAATTTTATATaGAGTGTCAGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CLELGFLQKQGSLQSERVNSNFI*SVRLQG
Trigger: CCCCTGCAACCTGACACTCCATATAAAATTACTGTT...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAACAAAGGCTTCCATaGGCTCATTGGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQQRLP*AHWNPL
Trigger: CAGTGGGTTCCAATGAGCCCATGGAAGCCTTTGTTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACAACAAAGGCTTCCATaGGCTCATTGGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLQQRLP*AHWNPL
Trigger: CAGTGGGTTCCAATGAGCCCATGGAAGCCTTTGTTG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACAGTTCACTTGGTTTGCTaGCAATGTTGGCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTVHLVC*QCWQAH
Trigger: ATGAGCTTGCCAACATTGCCAGCAAACCAAGTGAAC...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGTATGCTGAGTAGCTaGGGAAAGACCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVCMLSS*GKTLTP
Trigger: TGGAGTCAGGGTCTTTCCCCAGCTACTCAGCATACA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGCATCTGTCTCTACTaGTCCACACTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSICLY*STLDCR
Trigger: TCTGCAGTCCAGTGTGGACCAGTAGAGACAGATGCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTAGCATCTGTCTCTACTaGTCCACACTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRSICLY*STLDCR
Trigger: TCTGCAGTCCAGTGTGGACCAGTAGAGACAGATGCT...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGCATCTGTCTCTACTaGTCCACACTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSICLY*STLDCR
Trigger: TCTGCAGTCCAGTGTGGACCAGTAGAGACAGATGCT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTCACCTTTCATCCCTTaGCGACCTTGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNSPFIP*RPCSPG
Trigger: TCCGGGAGAGCAAGGTCGCCAAGGGATGAAAGGTGA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTCGGCCTGGAAGTCCTaGCTCTCCAGCATCACCTTT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNSAWKS*LSSITF
Trigger: AAAGGTGATGCTGGAGAGCCAGGACTTCCAGGCCGA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGATGAGGAGGTGATCTCCAGGTTTTCCTaGCTTCCCACTTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: FMPSNSSIQRTTWKDEEVISRFS*LPTWSC
Trigger: ACAGGACCAAGTGGGAAGCCAGGAAAACCTGGAGAT...CACCTCCTCATCTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGATCTCCAGGTTTTCCTaGCTTCCCACTTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVISRFS*LPTWSC
Trigger: ACAGGACCAAGTGGGAAGCCAGGAAAACCTGGAGAT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTATCTCCAGGTTTTCCTaGCTTCCCACTTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRISRFS*LPTWSC
Trigger: ACAGGACCAAGTGGGAAGCCAGGAAAACCTGGAGAT...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCTCGCATCATGTTCTaGGAAGCAATGTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVARIMF*EAMSPL
Trigger: TAGGGGAGACATTGCTTCCCAGAACATGATGCGAGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGCTCGCATCATGTTCTaGGAAGCAATGTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLARIMF*EAMSPL
Trigger: TAGGGGAGACATTGCTTCCCAGAACATGATGCGAGC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCACCTTTCTCTCCTaGCAAACCTCGTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFTFLS*QTSFPR
Trigger: CCTGGGGAACGAGGTTTGCCAGGAGAGAAAGGTGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTGGTGGACCTGTTCTaGATTCTCCTTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLVDLF*ILLVDL
Trigger: CAGGTCCACAAGGAGAATCCAGAACAGGTCCACCAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACCTAACTTCATCTACATaGCTTAAGGTTTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNLTSST*LKVCGC
Trigger: ACAACCACAAACCTTAAGCCATGTAGATGAAGTTAG...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
3UTR CAA 72 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTaGGAAGGCACACACACACACACACAGCAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHD*EGTHTHTQQKL
Trigger: TAGCTTTTGCTGTGTGTGTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAGCACACCTGGGAGATaGTCTCATTCTGAATATCCA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSTPGR*SHSEYP
Trigger: TGGATATTCAGAATGAGATCATCTCCCAGGTGTGCT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGTATTCTGTGTCTGCTaGGAGGTCGCGAACACTGAG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNVFCVC*EVANTE
Trigger: CTCAGTGTTCGCGACCTCTCAGCAGACACAGAATAC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACTTAGTAACTAAATCTTaGGGAGAACCACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNLVTKS*GEPRSS
Trigger: TGAAGAACGTGGTTCTCCTCAAGATTTAGTTACTAA...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGAAGCTGTTGTTCCTaGTCCTTGCCTAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLRSCCS*SLPKLS
Trigger: GGAAAGCTTAGGCAAGGATCAGGAACAACAGCTTCT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAAGTCACTCGGAAGCTTaGCATGGTTGGGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSSHSEA*HGWVRC
Trigger: ACATCTGACCCAACCATGTCAAGCTTCCGAGTGACT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGGATCCCCACTATACTaGGCAAGAGCAATTTGTACT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRGSPLY*ARAICT
Trigger: AGTACAAATTGCTCTTGCTCAGTATAGTGGGGATCC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCAAAGCCATGCCTGTaGGAGTATTGCCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSKPCL*EYCLLC
Trigger: ACAAAGGAGGCAATACTCTCACAGGCATGGCTTTGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATCAAAGCCATGCCTGTaGGAGTATTGCCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSKPCL*EYCLLC
Trigger: ACAAAGGAGGCAATACTCTCACAGGCATGGCTTTGA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCACTCCCTCATCCTTaGGTTTCTTTGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPLPHP*VSLKVL
Trigger: AAGCACCTTCAAAGAAACTCAAGGATGAGGGAGTGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCATAAATATTCAGGCTaGCTACAGGCACTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVHKYSG*LQALAR
Trigger: CCTTGCCAGTGCCTGTAGTCAGCCTGAATATTTATG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTGAGTTTCAGATCCTaGGGTCTGGGTAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLSFRS*GLGKGK
Trigger: CTTGCCTTTACCCAGACCTCAGGATCTGAAACTCAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCACCTCTACCTCTTTaGCATCCTCTTCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPPLPL*HPLLVF
Trigger: AAACACCAGAAGAGGATGTCAAAGAGGTAGAGGTGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACCACCTCTACCTCTTTaGCATCCTCTTCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLPPLPL*HPLLVF
Trigger: AAACACCAGAAGAGGATGTCAAAGAGGTAGAGGTGG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGTGTACAAGGTCTGTaGGAAGAGGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVCVQGL*EEVFEG
Trigger: TCCCTCAAAGACCTCTTCTCACAGACCTTGTACACA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTGATCCCAAGTCCCTCTaGAACCCTCTGATGTTACTT +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRDPKSL*NPLMLL
Trigger: AAGTAACATCAGAGGGTTTCAGAGGGACTTGGGATC...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGATCCCAAGTCCCTCTaGAACCCTCTGATGTTACTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVDPKSL*NPLMLL
Trigger: AAGTAACATCAGAGGGTTTCAGAGGGACTTGGGATC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACATCTGAAGCTCCATaGTCCCAAGTCCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTSEAP*SQVPLK
Trigger: TTTCAGAGGGACTTGGGATCATGGAGCTTCAGATGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAACATCTGAAGCTCCATaGTCCCAAGTCCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLTSEAP*SQVPLK
Trigger: TTTCAGAGGGACTTGGGATCATGGAGCTTCAGATGT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGTAGAGAGACACATCTaGAGCTCCATGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVVERHI*SSMIPS
Trigger: ACTTGGGATCATGGAGCTTCAGATGTGTCTCTCTAC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAGGTCATCACTTTCTaGCTCATCAGGATAGATGGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQVITF*LIRIDG
Trigger: GCCATCTATCCTGATGAGTCAGAAAGTGATGACCTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCACTACTATAGATTCTaGGGGTCTTGTGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVHYYRF*GSCAIH
Trigger: GTGGATGGCACAAGACCCTCAGAATCTATAGTAGTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACACTACTATAGATTCTaGGGGTCTTGTGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLHYYRF*GSCAIH
Trigger: GTGGATGGCACAAGACCCTCAGAATCTATAGTAGTG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGATCCCAGGACACCCTaGATCTTGTATACCATTCGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVDPRTP*ILYTIR
Trigger: ACGAATGGTATACAAGATTCAGGGTGTCCTGGGATC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGATCCCAGGACACCCTaGATCTTGTATACCATTCGT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLDPRTP*ILYTIR
Trigger: ACGAATGGTATACAAGATTCAGGGTGTCCTGGGATC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGATGAGGAGGTGCTGTCAAGGGGACACTaGGTCCAGAATCATATTGAG +
Preference number: 4 (lower is better)
Translates to: FMPSNSSIQRTTWKDEEVLSRGH*VQNHIE
Trigger: CTCAATATGATTCTGGACTCAGTGTCCCCTTGACAG...CACCTCCTCATCTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGTCAAGGGGACACTaGGTCCAGAATCATATTGAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLSRGH*VQNHIE
Trigger: CTCAATATGATTCTGGACTCAGTGTCCCCTTGACAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGTATAATGTAGTGCCTTaGTCTGTCAAGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWYNVVP*SVKGTL
Trigger: CAGTGTCCCCTTGACAGATCAAGGCACTACATTATA...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGATAATCAGTGTCTGGTaGAAGGCCAGTGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVIISVW*KASEAV
Trigger: CACTGCTTCACTGGCCTTTCACCAGACACTGATTAT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAATAATCAGTGTCTGGTaGAAGGCCAGTGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLIISVW*KASEAV
Trigger: CACTGCTTCACTGGCCTTTCACCAGACACTGATTAT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGAATCCCAGCAGGACTaGTTTCATCAAAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSESQQD*FHQSLP
Trigger: TGGGAGGCTTTGATGAAATCAGTCCTGCTGGGATTC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCTGTATTGCACAAATaGAACCTGAATCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAVLHK*NLNPSR
Trigger: CCTGCTGGGATTCAGGTTTCATTTGTGCAATACAGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAATGAGAGGACAACTTaGAGTGGCAGTTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDNERTT*SGSFTN
Trigger: GTTTGTGAAACTGCCACTTCAAGTTGTCCTCTCATT...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGGTCTGCTGTAGGCTaGTTCACAAACGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVRSAVG*FTNAFF
Trigger: GAAGAATGCGTTTGTGAATCAGCCTACAGCAGACCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGGATTTGGAATGCGGCTaGTTTCCTTTCCCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMDLECG*FPFPFK
Trigger: CTTAAAGGGGAAAGGAAATCAGCCGCATTCCAAATC...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGATTTGGAATGCGGCTaGTTTCCTTTCCCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRDLECG*FPFPFK
Trigger: CTTAAAGGGGAAAGGAAATCAGCCGCATTCCAAATC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACACGATTCAGCATCTGATTaGATCTGTTCATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: LCPIQHYNYGMIWKAHTHDSASD*ICSSDH
Trigger: GTGGTCAGATGAACAGATTCAATCAGATGCTGAATC...GTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAAACCATTATCTGTGGTaGGATTTCCATACAGACTCA +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEENHYLW*DFHTDS
Trigger: TGAGTCTGTATGGAAATCTCACCACAGATAATGGTT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATCTAACAAGCAAGAGATaGGGAGATTCCATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDLTSKR*GDSIWC
Trigger: ACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAG...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGGGAAAGATGAGGAGGTaGGGGGAAGTTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKGKMRR*GEVSLA
Trigger: AGCCAATGAAACTTCCCCTCACCTCCTCATCTTTCC...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAAGGTGGGTCAACTTCTaGCTCAATGGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSRWVNF*LNGRQE
Trigger: CTCCTGTCTTCCATTGAGGCAGAAGTTGACCCACCT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAACCCCTGTCATTGTGTTaGCACCTTTATATGGAATTT +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEPLSLC*HLYMEF
Trigger: AAATTCCATATAAAGGTGGCAACACAATGACAGGGG...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACCTTCCTTCAATCCCTaGAGCACCGTATTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLPSFNP*STVLVV
Trigger: TACAACCAATACGGTGCTGCAGGGATTGAAGGAAGG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGTGTGCATTTAACTaGCACTCTGTTCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLCAFN*HSVLGS
Trigger: GGATCCCAGAACAGAGTGGCAGTTAAATGCACACAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACTGTGTGCATTTAACTaGCACTCTGTTCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLCAFN*HSVLGS
Trigger: GGATCCCAGAACAGAGTGGCAGTTAAATGCACACAG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACAAGGTCAGTCAGCTaGATGTCATTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTRSVS*MSFTVG
Trigger: GCCAACAGTGAATGACATGCAGCTGACTGACCTTGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCAGCAGTGTGCGCTCACTaGCAATCAGGTCATCACTTT +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSAVCAH*QSGHHF
Trigger: AAAGTGATGACCTGATTGGCAGTGAGCGCACACTGC...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGCAGTGTGCGCTCACTaGCAATCAGGTCATCACTTT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSAVCAH*QSGHHF
Trigger: AAAGTGATGACCTGATTGGCAGTGAGCGCACACTGC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATACGAGGATTTCCCTCTaGATGGTCCCAGCGGACATT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNTRISL*MVPADI
Trigger: AATGTCCGCTGGGACCATGCAGAGGGAAATCCTCGT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTATGGAGTGTCAGGTTaGAGGGGCTGCAGTATTACA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVYGVSG*RGCSIT
Trigger: TGTAATACTGCAGCCCCTGCAACCTGACACTCCATA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATATGGAGTGTCAGGTTaGAGGGGCTGCAGTATTACA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLYGVSG*RGCSIT
Trigger: TGTAATACTGCAGCCCCTGCAACCTGACACTCCATA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCAAGAACACAATATCTaGCTTGGCCCCTTTGCATAC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRQEHNI*LGPFAY
Trigger: GTATGCAAAGGGGCCAAGGCAGATATTGTGTTCTTG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAATTATCGTCCCCAATaGTCCAGGAGGCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVNYRPQ*SRRHQS
Trigger: TGACTGATGCCTCCTGGAGCATTGGGGACGATAATT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAATTATCGTCCCCAATaGTCCAGGAGGCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLNYRPQ*SRRHQS
Trigger: TGACTGATGCCTCCTGGAGCATTGGGGACGATAATT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCAGGACATTCTTCCTCATaGCGCTCTCCCAAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSGHSSS*RSPKSR
Trigger: TCTTGACTTGGGAGAGCGGCATGAGGAAGAATGTCC...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGGACATTCTTCCTCATaGCGCTCTCCCAAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSGHSSS*RSPKSR
Trigger: TCTTGACTTGGGAGAGCGGCATGAGGAAGAATGTCC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCCACAATGAACACGTaGCGTTCACTTGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSTMNT*RSLGLL
Trigger: CAGCAAACCAAGTGAACGGCACGTGTTCATTGTGGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCTTGCTAGAAGGATCTaGAATCACTCCAACTTGTGG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRLARRI*NHSNLW
Trigger: CCACAAGTTGGAGTGATTGCAGATCCTTCTAGCAAG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGACTTGTCTTGCAACTaGTCGCATCATGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVDLSCN*SHHVLG
Trigger: TCCCAGAACATGATGCGAGCAGTTGCAAGACAAGTC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGAAAATGTCTACAGACTaGGTGCTTGGAGCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMKMSTD*VLGARL
Trigger: AAGCCTAGCTCCAAGCACGCAGTCTGTAGACATTTT...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACATCTGTAACCCACAATTaGATCAACTGGTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTSVTHN*INWFCP
Trigger: TGGGCAAAACCAGTTGATCCAATTGTGGGTTACAGA...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACTTTTACTTCTTCGGTaGTCTCCTCTCCAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLLLLR*SPLQLR
Trigger: CCTTAGCTGGAGAGGAGACCACCGAAGAAGTAAAAG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCACCCCCTGCCACTaGGGTATATGTGACGAGATA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFTPCH*GICDEI
Trigger: TATCTCGTCACATATACCCCAGTGGCAGGGGGTGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCCTGCAGCACCGTATTaGTTGTATCTCCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNPAAPY*LYLPSQ
Trigger: CTGTGAGGGGAGATACAACCAATACGGTGCTGCAGG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCACACTGTCAGAAGGTaGTGTCCAGCTCACTCTAAA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVHTVRR*CPAHSK
Trigger: TTTAGAGTGAGCTGGACACCACCTTCTGACAGTGTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCATGTCATTCACTGTTaGCCCCAAACGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVHVIHC*PQTHLF
Trigger: AAAGAGGTGCGTTTGGGGCCAACAGTGAATGACATG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTTCGTGGGCCACTTTTaGGAGCTTGTGTTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRFVGHF*ELVLLR
Trigger: TCTTAACAACACAAGCTCCCAAAAGTGGCCCACGAA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGTGTAAGGAGTGTCTaGCTTCAGTTTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSVRSV*LQFLQD
Trigger: GTCCTGCAGAAACTGAAGCCAGACACTCCTTACACT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAGTGTTTAGAGGTTTaGTCTTGCCTCTTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQCLEV*SCLFPS
Trigger: TGACGGGAAGAGGCAAGACCAAACCTCTAAACACTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGACACATCGCTAACAAGCAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGGTAGGATTGTATACTTaGACATTTCTTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RHIANKQEMRRFHLVLFRVGLYT*TFLASP
Trigger: AGGACTGGCAAGAAATGTCCAAGTATACAATCCTAC...CCGGAATAACACCAAATGGAATCTCCTCATCTCTTGCTTGTTAGCGATGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGTTTAACAGAGACTCCTaGTCCCTCGAGATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLFNRDS*SLEIWC
Trigger: ACACCAAATCTCGAGGGACCAGGAGTCTCTGTTAAA...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACACAATATCTGCCTTaGCCCCTTTGCATACATCCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTQYLP*PLCIHP
Trigger: GGGATGTATGCAAAGGGGCCAAGGCAGATATTGTGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAACACAATATCTGCCTTaGCCCCTTTGCATACATCCC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLTQYLP*PLCIHP
Trigger: GGGATGTATGCAAAGGGGCCAAGGCAGATATTGTGT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGGTTCACTTGGTTTGCTaGCAATGTTGGCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLVHLVC*QCWQAH
Trigger: ATGAGCTTGCCAACATTGCCAGCAAACCAAGTGAAC...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGTTCACTTGGTTTGCTaGCAATGTTGGCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRVHLVC*QCWQAH
Trigger: ATGAGCTTGCCAACATTGCCAGCAAACCAAGTGAAC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGAGCATCTGTCTCTACTaGTCCACACTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKSICLY*STLDCR
Trigger: TCTGCAGTCCAGTGTGGACCAGTAGAGACAGATGCT...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCTCCAGGTTTTCCTaGCTTCCCACTTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSISRFS*LPTWSC
Trigger: ACAGGACCAAGTGGGAAGCCAGGAAAACCTGGAGAT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGGCTCGCATCATGTTCTaGGAAGCAATGTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKARIMF*EAMSPL
Trigger: TAGGGGAGACATTGCTTCCCAGAACATGATGCGAGC...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTGGCTGGTTGCGACTaGACTGGTAATCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLAGCD*TGNHLE
Trigger: TTCCAAATGATTACCAGTCCAGTCGCAACCAGCCAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCGTTGTATGGGATGCTaGCACACTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVRCMGC*HTEKNH
Trigger: GTGATTCTTCTCAGTGTGCCAGCATCCCATACAACG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTAATACACAGCAGCTCTaGGTTCCAGGACTTAACTGC +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRNTQQL*VPGLNC
Trigger: GCAGTTAAGTCCTGGAACCCAGAGCTGCTGTGTATT...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTTACTTCAGGTGAGTTaGGGTTCCTACAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRLLQVS*GSYNGN
Trigger: GTTGCCATTGTAGGAACCCCAACTCACCTGAAGTAA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGTATCAGAGCTGTATTaGACAACTCCAACTCTTGTC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRVSELY*TTPTLV
Trigger: GACAAGAGTTGGAGTTGTTCAATACAGCTCTGATAC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGAAAACATGGTTCAGTaGAGGTGTGGAGGCAATTTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLENMVQ*RCGGNL
Trigger: CAAATTGCCTCCACACCTTCACTGAACCATGTTTTC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCAAAGTTGGCCACATTaGAAACATGGTTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRQSWPH*KHGSVK
Trigger: CTTCACTGAACCATGTTTTCAATGTGGCCAACTTTG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCATGGCAATCAAATTTaGAGGAGGCTCAACAACTTC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRHGNQI*RRLNNF
Trigger: GAAGTTGTTGAGCCTCCTTCAAATTTGATTGCCATG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTTATCGCAGGATCTCTaGAAGCATCTGATGATTTCC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRLSQDL*KHLMIS
Trigger: GGAAATCATCAGATGCTTTCAGAGATCCTGCGATAA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAAATAGCTTCCAATTCTaGGCGAACGGCATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSNSFQF*ANGILH
Trigger: GTGAAGGATGCCGTTCGCTCAGAATTGGAAGCTATT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGCCAATAAGCCCCAATTaGTGTGTCAGTGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRPISPN*CVSDVF
Trigger: AAAGACATCACTGACACATCAATTGGGGCTTATTGG...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGATGAGGAGGTGGGATCCCCACTATACTaGGCAAGAGCAATTTGTACT +
Preference number: 4 (lower is better)
Translates to: FMPSNSSIQRTTWKDEEVGSPLY*ARAICT
Trigger: AGTACAAATTGCTCTTGCTCAGTATAGTGGGGATCC...CACCTCCTCATCTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGATCCCCACTATACTaGGCAAGAGCAATTTGTACT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGSPLY*ARAICT
Trigger: AGTACAAATTGCTCTTGCTCAGTATAGTGGGGATCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGTTCTGTTGGCGAATaGAATTCAAAGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSSVGE*NSKPCL
Trigger: CAGGCATGGCTTTGAATTTCATTCGCCAACAGAACT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGTTCTGTTGGCGAATaGAATTCAAAGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSSVGE*NSKPCL
Trigger: CAGGCATGGCTTTGAATTTCATTCGCCAACAGAACT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAATTCAACATCGTCTTGTaGTTTTCCATCAGTAATGAG +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEFNIVL*FSISNE
Trigger: CTCATTACTGATGGAAAATCACAAGACGATGTTGAA...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACCACTCCCTCATCCTTaGGTTTCTTTGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSPLPHP*VSLKVL
Trigger: AAGCACCTTCAAAGAAACTCAAGGATGAGGGAGTGG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCACTATCCTGGAGAGTaGCTCAAAATCTGCCACATT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVHYPGE*LKICHI
Trigger: AATGTGGCAGATTTTGAGTCACTCTCCAGGATAGTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACATAAATATTCAGGCTaGCTACAGGCACTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSHKYSG*LQALAR
Trigger: CCTTGCCAGTGCCTGTAGTCAGCCTGAATATTTATG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGTACTGCAGAAACGCTaGCTGTGTACAAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNVLQKR*LCTRSV
Trigger: CACAGACCTTGTACACAGTCAGCGTTTCTGCAGTAC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGATCCCAAGTCCCTCTaGAACCCTCTGATGTTACTT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSDPKSL*NPLMLL
Trigger: AAGTAACATCAGAGGGTTTCAGAGGGACTTGGGATC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCAACATCTGAAGCTCCATaGTCCCAAGTCCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSTSEAP*SQVPLK
Trigger: TTTCAGAGGGACTTGGGATCATGGAGCTTCAGATGT...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTACAGTCACAGTGTATaGGGTATCTGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVYSHSV*GIWLQI
Trigger: AATCTGCAGCCAGATACCTCATACACTGTGACTGTA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAGGTGGTGCTGGGATTaGGATTGTGTAAGGTATATG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVRWCWD*DCVRYM
Trigger: CATATACCTTACACAATCTCAATCCCAGCACCACCT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTGTCAAGGGGACACTaGGTCCAGAATCATATTGAG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLSRGH*VQNHIE
Trigger: CTCAATATGATTCTGGACTCAGTGTCCCCTTGACAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTATAATGTAGTGCCTTaGTCTGTCAAGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVYNVVP*SVKGTL
Trigger: CAGTGTCCCCTTGACAGATCAAGGCACTACATTATA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGCACAAATGAAACCTaGATCCCAGCAGGACTGATT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVCTNET*IPAGLI
Trigger: AATCAGTCCTGCTGGGATTCAGGTTTCATTTGTGCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATAAAGACACTGAACCCTaGCTGCTGGATGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNKDTEP*LLDDQS
Trigger: GCTTTGGTCATCCAGCAGTCAGGGTTCAGTGTCTTT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCAAAGTCGTCCACAATaGACACGTGCCGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNQSRPQ*TRAVHL
Trigger: CAAGTGAACGGCACGTGTTCATTGTGGACGACTTTG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAATGAGAGGACAACTTaGAGTGGCAGTTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRNERTT*SGSFTN
Trigger: GTTTGTGAAACTGCCACTTCAAGTTGTCCTCTCATT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGATTTGGAATGCGGCTaGTTTCCTTTCCCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVDLECG*FPFPFK
Trigger: CTTAAAGGGGAAAGGAAATCAGCCGCATTCCAAATC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACCACCTCTTTCAAAACTaGGGCTCCTCATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHHLFQN*GSSWLC
Trigger: ACACAGCCATGAGGAGCCTCAGTTTTGAAAGAGGTG...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTGGAACTGTATCCCGTTaGTGCACTAACTTCATCTAC +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRGTVSR*CTNFIY
Trigger: GTAGATGAAGTTAGTGCATCAACGGGATACAGTTCC...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGGAGTTCTTTTGCATCTaGAGCTTTAATGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMEFFCI*SFNAQG
Trigger: TCCTTGGGCATTAAAGCTGCAGATGCAAAAGAACTC...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGGATCCCGGCTGTATTaGACAAGACTAATCTGGACC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNGSRLY*TRLIWT
Trigger: GGTCCAGATTAGTCTTGTGCAATACAGCCGGGATCC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTTGAGTTTCACCCCCTaGCACTGGGGTATATGTGAC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNLSFTP*HWGICD
Trigger: GTCACATATACCCCAGTGGCAGGGGGTGAAACTCAA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGTTCTCCTTCTCCACTaGTGTAAGTGGCAAATACTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLVLLLH*CKWQIL
Trigger: CAGTATTTGCCACTTACAGCAGTGGAGAAGGAGAAC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTTGTACGGCAAGTTTaGCACAGCTTGCAACAAGCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFVRQV*HSLQQA
Trigger: AGCTTGTTGCAAGCTGTGGCAAACTTGCCGTACAAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGATTCTGAGGGTCTTGTaGCATCCACAGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVILRVL*HPQENT
Trigger: TGTATTCTCCTGTGGATGGCACAAGACCCTCAGAAT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAAGAACACAATATCTaGCTTGGCCCCTTTGCATAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQEHNI*LGPFAY
Trigger: GTATGCAAAGGGGCCAAGGCAGATATTGTGTTCTTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGCCGTTCACTTGGTTTaGTGGCAATGTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNAVHLV*WQCWQA
Trigger: AGCTTGCCAACATTGCCAGCAAACCAAGTGAACGGC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTTGCTAGAAGGATCTaGAATCACTCCAACTTGTGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLARRI*NHSNLW
Trigger: CCACAAGTTGGAGTGATTGCAGATCCTTCTAGCAAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGTCAAATGTAACAGTTTaGACCTCGCCTCTTGTATCC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWSNVTV*TSPLVS
Trigger: GGATACAAGAGGCGAGGTGCAAACTGTTACATTTGA...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTCAAATGTAACAGTTTaGACCTCGCCTCTTGTATCC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSNVTV*TSPLVS
Trigger: GGATACAAGAGGCGAGGTGCAAACTGTTACATTTGA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGGTCCACACTGGACTaGAGACAATGTCAAAACTCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVWSTLD*RQCQNS
Trigger: AGAGTTTTGACATTGTCTGCAGTCCAGTGTGGACCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATGGTCCACACTGGACTaGAGACAATGTCAAAACTCT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLWSTLD*RQCQNS
Trigger: AGAGTTTTGACATTGTCTGCAGTCCAGTGTGGACCA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGACTTGTCTTGCAACTaGTCGCATCATGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSDLSCN*SHHVLG
Trigger: TCCCAGAACATGATGCGAGCAGTTGCAAGACAAGTC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGTTCACAGACTTGTCTTaGAACTGCTCGCATCATGTT +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMFTDLS*NCSHHV
Trigger: AACATGATGCGAGCAGTTGCAAGACAAGTCTGTGAA...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTCTGTAACCCACAATTaGATCAACTGGTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSVTHN*INWFCP
Trigger: TGGGCAAAACCAGTTGATCCAATTGTGGGTTACAGA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTAGGTTTCTTCTCCACTaGCTTTGTCGAACTACCTGT +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRRFLLH*LCRTTC
Trigger: ACAGGTAGTTCGACAAAGCCAGTGGAGAAGAAACCT...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGGTTTCTTCTCCACTaGCTTTGTCGAACTACCTGT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLRFLLH*LCRTTC
Trigger: ACAGGTAGTTCGACAAAGCCAGTGGAGAAGAAACCT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAATTTCCACTTCATCCTaGGATTTTCCATCCGTAATA +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEEISTSS*DFPSVI
Trigger: TATTACGGATGGAAAATCCCAGGATGAAGTGGAAAT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGCCACATTGAAAACATaGTTCAGTGAAGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLATLKT*FSEGVE
Trigger: CTCCACACCTTCACTGAACCATGTTTTCAATGTGGC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGCTTCCTGCAGTCATTaGTGTGAGGATGACTTTGTA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLASCSH*CEDDFV
Trigger: TACAAAGTCATCCTCACACCAATGACTGCAGGAAGC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAATCTCCATTATTGAAATaGGTTCACTGGATGTCATTC +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEESPLLK*VHWMSF
Trigger: GAATGACATCCAGTGAACCCATTTCAATAATGGAGA...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTCCTGAAGTTCTGTTaGCGAATGAAATTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWVLKFC*RMKFKA
Trigger: GGCTTTGAATTTCATTCGCCAACAGAACTTCAGGAC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGGCCACATTGTATGCATaGGTATCATCAGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRATLYA*VSSGSV
Trigger: AACTGATCCTGATGATACCCATGCATACAATGTGGC...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTGCTTCCAAATCACCTaGACCTTTGACACTGTTACA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRCFQIT*TFDTVT
Trigger: TGTAACAGTGTCAAAGGTCCAGGTGATTTGGAAGCA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGAAGAGGAAACTCTAAAAGAACGATaGGTTCGCTCAGAAATAACT +
Preference number: 4 (lower is better)
Translates to: RDVYEHSMPRRITEIEEETLKER*VRSEIT
Trigger: AGTTATTTCTGAGCGAACCCATCGTTCTTTTAGAGT...TTCCTCTTCTATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCTGCATACTCCGTGTTaGGAACAAGGTCAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNLHTPC*EQGQSA
Trigger: AGCTGACTGACCTTGTTCCCAACACGGAGTATGCAG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp GCTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACATGGAAACTTCATAGATaGTGTTGGGGTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ALSDSTLQLWHDLEGTHTWKLHR*CWGSGF
Trigger: AAAACCTGAACCCCAACACCATCTATGAAGTTTCCA...TGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCGTGGGCCACTTTTaGGAGCTTGTGTTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFVGHF*ELVLLR
Trigger: TCTTAACAACACAAGCTCCCAAAAGTGGCCCACGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTGGACCACCTGCTGCTaGTGCATAGAAGAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNWTTCC*CIEELV
Trigger: TACAAGCTCTTCTATGCACCAGCAGCAGGTGGTCCA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTACCGAGAGGCTATTaGTTGTTTCACCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLPRGY*LFHQRL
Trigger: GAGTCTTTGGTGAAACAACCAATAGCCTCTCGGTAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTCTTCCATGGGCTCATTaGAACCCACTGGCTTATATA +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRLPWAH*NPLAYI
Trigger: TATATAAGCCAGTGGGTTCCAATGAGCCCATGGAAG...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTTCCATGGGCTCATTaGAACCCACTGGCTTATATA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLPWAH*NPLAYI
Trigger: TATATAAGCCAGTGGGTTCCAATGAGCCCATGGAAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACTTCCATGGGCTCATTaGAACCCACTGGCTTATATA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLPWAH*NPLAYI
Trigger: TATATAAGCCAGTGGGTTCCAATGAGCCCATGGAAG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGGTCCCTCGAGATTTaGTGTCTGCACAAAAACAGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVWSLEI*CLHKNS
Trigger: ACTGTTTTTGTGCAGACACCAAATCTCGAGGGACCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTTAACAGAGACTCCTaGTCCCTCGAGATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFNRDS*SLEIWC
Trigger: ACACCAAATCTCGAGGGACCAGGAGTCTCTGTTAAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATTTAACAGAGACTCCTaGTCCCTCGAGATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLFNRDS*SLEIWC
Trigger: ACACCAAATCTCGAGGGACCAGGAGTCTCTGTTAAA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGTAGGGGCTTCTGTTaGTTTCACAGTGGTATGTTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVCRGFC*FHSGMF
Trigger: GAACATACCACTGTGAAACCAACAGAAGCCCCTACA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGTTTGCTGGCAATGTTaGCAAGCTCATTGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVVCWQC*QAHCSR
Trigger: TCGACTACAATGAGCTTGCCAACATTGCCAGCAAAC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGTTTGCTGGCAATGTTaGCAAGCTCATTGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLVCWQC*QAHCSR
Trigger: TCGACTACAATGAGCTTGCCAACATTGCCAGCAAAC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGTTCACTTGGTTTGCTaGCAATGTTGGCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVVHLVC*QCWQAH
Trigger: ATGAGCTTGCCAACATTGCCAGCAAACCAAGTGAAC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATGAGGACAACTTGAAGTaGCAGTTTCACAAACAAATG +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDEDNLK*QFHKQM
Trigger: CATTTGTTTGTGAAACTGCCACTTCAAGTTGTCCTC...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTGTATGCTGAGTAGCTaGGGAAAGACCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNCMLSS*GKTLTP
Trigger: TGGAGTCAGGGTCTTTCCCCAGCTACTCAGCATACA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCTACTGGTCCACACTaGACTGCAGACAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSTGPH*TADNVK
Trigger: TTTGACATTGTCTGCAGTCCAGTGTGGACCAGTAGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATCTACTGGTCCACACTaGACTGCAGACAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSTGPH*TADNVK
Trigger: TTTGACATTGTCTGCAGTCCAGTGTGGACCAGTAGA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATACATGTGCAAGAATTTaGAAAAGCAGGGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDTCARI*KSRAFS
Trigger: GGAAAATGCCCTGCTTTTCCAAATTCTTGCACATGT...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACGTTGTATGGGATGCTaGCACACTGAGAAGAATCAC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSRCMGC*HTEKNH
Trigger: GTGATTCTTCTCAGTGTGCCAGCATCCCATACAACG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTGGCAACAACGTACCTaGATAGCCTTGCCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNWQQRT*IALPVV
Trigger: TACAACGGGCAAGGCTATCCAGGTACGTTGTTGCCA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTTTAAAATTCAAGTCTaGAGGTGGGTCAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRFKIQV*RWVNFC
Trigger: GCAGAAGTTGACCCACCTTCAGACTTGAATTTTAAA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAATCAGTCCAGGCACTaGCAGAGCATTTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLNQSRH*QSIFVS
Trigger: AGATACAAAAATGCTCTGTCAGTGCCTGGACTGATT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTCATGGCGGAAACACTaGTCTGGTATTCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNSWRKH*SGILCL
Trigger: CAGACACAGAATACCAGATCAGTGTTTCCGCCATGA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATGGAGTACCAGGTCCTaGGAAATATTCAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLWSTRS*EIFRNY
Trigger: GTAATTCCTGAATATTTCTCAGGACCTGGTACTCCA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACTATGTGGTCTGTGGCTaGAGTCGCTTTAACACTGTC +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHYVVCG*SRFNTV
Trigger: GACAGTGTTAAAGCGACTTCAGCCACAGACCACATA...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTATGTGGTCTGTGGCTaGAGTCGCTTTAACACTGTC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNYVVCG*SRFNTV
Trigger: GACAGTGTTAAAGCGACTTCAGCCACAGACCACATA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTGTCCAACAAGTGGTaGGCTTTCTCCTCCATCAAA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLSNKW*AFSSIK
Trigger: TTTGATGGAGGAGAAAGCTCACCACTTGTTGGACAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGATCCTTGAGTTTCTTTaGAGGTGCTTCAACATCGTC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVILEFL*RCFNIV
Trigger: GACGATGTTGAAGCACCTTCAAAGAAACTCAAGGAT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTGTGTACAAGGTCTGTaGGAAGAGGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNCVQGL*EEVFEG
Trigger: TCCCTCAAAGACCTCTTCTCACAGACCTTGTACACA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTCCCTCTGAAACCCTCTaGTGTTACTTCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRPSETL*CYFSNL
Trigger: AAGATTACTGAAGTAACATCAGAGGGTTTCAGAGGG...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCCCTCTGAAACCCTCTaGTGTTACTTCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVPSETL*CYFSNL
Trigger: AAGATTACTGAAGTAACATCAGAGGGTTTCAGAGGG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGTAGAGAGACACATCTaGAGCTCCATGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNVERHI*SSMIPS
Trigger: ACTTGGGATCATGGAGCTTCAGATGTGTCTCTCTAC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATACAGTCACAGTGTATaGGGTATCTGGCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSYSHSV*GIWLQI
Trigger: AATCTGCAGCCAGATACCTCATACACTGTGACTGTA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCTGCACAAAAACAGTaGCACCATAATCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSAQKQ*HHNQCL
Trigger: CAGACACTGATTATGGTGTCACTGTTTTTGTGCAGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATCTGCACAAAAACAGTaGCACCATAATCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSAQKQ*HHNQCL
Trigger: CAGACACTGATTATGGTGTCACTGTTTTTGTGCAGA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATGCACAAATGAAACCTaGATCCCAGCAGGACTGATT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSCTNET*IPAGLI
Trigger: AATCAGTCCTGCTGGGATTCAGGTTTCATTTGTGCA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAATGAGAGGACAACTTaGAGTGGCAGTTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVNERTT*SGSFTN
Trigger: GTTTGTGAAACTGCCACTTCAAGTTGTCCTCTCATT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGCATTTTAAAACCTGGTaGGGTGTAGCCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWHFKTW*GVAIQI
Trigger: TATTTGGATGGCTACACCTCACCAGGTTTTAAAATG...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATAGGTCTGCTGTAGGCTaGTTCACAAACGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNRSAVG*FTNAFF
Trigger: GAAGAATGCGTTTGTGAATCAGCCTACAGCAGACCT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGATTCAGCATCTGATTaGATCTGTTCATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVDSASD*ICSSDH
Trigger: GTGGTCAGATGAACAGATTCAATCAGATGCTGAATC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGATTCAGCATCTGATTaGATCTGTTCATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLDSASD*ICSSDH
Trigger: GTGGTCAGATGAACAGATTCAATCAGATGCTGAATC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTAATATACAGTACATaGCATCTTCTGTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWVIYST*HLLWLY
Trigger: GTACAGCCACAGAAGATGTCATGTACTGTATATTAC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTATCTGACCTGTAAATaGGAATTTCAACACCTCCCC +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRYLTCK*EFQHLP
Trigger: GGGGAGGTGTTGAAATTCTCATTTACAGGTCAGATA...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGGTACACTGCTCTATCTaGCCTGTAAATGAGAATTTC +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMVHCSI*PVNENF
Trigger: GAAATTCTCATTTACAGGTCAGATAGAGCAGTGTAC...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTACACTGCTCTATCTaGCCTGTAAATGAGAATTTC +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWVHCSI*PVNENF
Trigger: GAAATTCTCATTTACAGGTCAGATAGAGCAGTGTAC...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATTTGTTTGAGTTCTTTTaGATCTGCAGCTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDLFEFF*ICSFNA
Trigger: GGCATTAAAGCTGCAGATGCAAAAGAACTCAAACAA...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGTTTGCAATCCCAATaGTATAGGAGCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSLQSQ*YRSHQP
Trigger: TGGTTGATGGCTCCTATAGCATTGGGATTGCAAACT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGACGACTTTCCCTGGTaGTGGTTTCCATGTAACTCT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNDDFPW*WFPCNS
Trigger: AGAGTTACATGGAAACCAGCACCAGGGAAAGTCGTC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGTTGTTCCTGATCCTTaGCTAAGCTTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNVVPDP*LSFPSP
Trigger: GGGAGAAGGAAAGCTTAGGCAAGGATCAGGAACAAC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAAGTTTGCCACAGCTTaGAACAAGCTCTTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVKFATA*NKLFLS
Trigger: AGACAAGAAGAGCTTGTTGCAAGCTGTGGCAAACTT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTTGTACGGCAAGTTTaGCACAGCTTGCAACAAGCT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFVRQV*HSLQQA
Trigger: AGCTTGTTGCAAGCTGTGGCAAACTTGCCGTACAAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGATCTGCCACATTGTATaGATGGGTATCATCAGGATC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVICHIV*MGIIRI
Trigger: GATCCTGATGATACCCATGCATACAATGTGGCAGAT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAATCTGCCACATTGTATaGATGGGTATCATCAGGATC +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLICHIV*MGIIRI
Trigger: GATCCTGATGATACCCATGCATACAATGTGGCAGAT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTATGAGGTATCTGGCTaGAGATTCCTAAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVYEVSG*RFLRMA
Trigger: TGCCATTCTTAGGAATCTGCAGCCAGATACCTCATA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGTACTTGGACATTTCTTaGCAGTCCTCTCATCAATGT +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMYLDIS*QSSHQC
Trigger: ACATTGATGAGAGGACTGGCAAGAAATGTCCAAGTA...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTACTTGGACATTTCTTaGCAGTCCTCTCATCAATGT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRYLDIS*QSSHQC
Trigger: ACATTGATGAGAGGACTGGCAAGAAATGTCCAAGTA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTCTGAGGGTCTTGTaGCATCCACAGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSILRVL*HPQENT
Trigger: TGTATTCTCCTGTGGATGGCACAAGACCCTCAGAAT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGTGATTTGCCAAATTaGAAAAGGGTCACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVCDLPN*KRVTGS
Trigger: ACTCCCAGTGACCCTTTTGCAATTTGGCAAATCACA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCAAATGTAACAGTTTaGACCTCGCCTCTTGTATCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSNVTV*TSPLVS
Trigger: GGATACAAGAGGCGAGGTGCAAACTGTTACATTTGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp ATGTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTCAAATGTAACAGTTTaGACCTCGCCTCTTGTATCC +
Preference number: 4 (lower is better)
Translates to: MLVCLKQGGLRQYGTVSRSNVTV*TSPLVS
Trigger: GGATACAAGAGGCGAGGTGCAAACTGTTACATTTGA...ACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCATGGTCCACACTGGACTaGAGACAATGTCAAAACTCT +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSWSTLD*RQCQNS
Trigger: AGAGTTTTGACATTGTCTGCAGTCCAGTGTGGACCA...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGTGTCCTGTGTACATGTaGAAGAATTTGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWCPVYM*KNLEKQ
Trigger: CTGCTTTTCCAAATTCTTGCACATGTACACAGGACA...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCACAGACTTGTCTTaGAACTGCTCGCATCATGTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFTDLS*NCSHHV
Trigger: AACATGATGCGAGCAGTTGCAAGACAAGTCTGTGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATAGGAAGATAAGTAATTaGAATGGAGTTGACGTTTCC +
Preference number: 4 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDRKISN*NGVDVS
Trigger: GGAAACGTCAACTCCATTGCAATTACTTATCTTCCT...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGCTCCACTGCTGTAAGTaGCAAATACTGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMLHCCK*QILKFC
Trigger: ACAGAATTTCAGTATTTGCCACTTACAGCAGTGGAG...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGTCCTGAAGTTCTGTTaGCGAATGAAATTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVVLKFC*RMKFKA
Trigger: GGCTTTGAATTTCATTCGCCAACAGAACTTCAGGAC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCACATTGTATGCATaGGTATCATCAGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVATLYA*VSSGSV
Trigger: AACTGATCCTGATGATACCCATGCATACAATGTGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGATCATCCACTATCCTaGAGAGTGACTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVDHPLS*RVTQNL
Trigger: CAGATTTTGAGTCACTCTCCAGGATAGTGGATGATC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGCTTCCAAATCACCTaGACCTTTGACACTGTTACA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVCFQIT*TFDTVT
Trigger: TGTAACAGTGTCAAAGGTCCAGGTGATTTGGAAGCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCACACTGTCAGAAGGTaGTGTCCAGCTCACTCTAAA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNHTVRR*CPAHSK
Trigger: TTTAGAGTGAGCTGGACACCACCTTCTGACAGTGTG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCTTCATAGATGGTGTTaGGGTTCAGGTTTTCGAACA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLHRWC*GSGFRT
Trigger: TGTTCGAAAACCTGAACCCCAACACCATCTATGAAG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTACTTCATAGATGGTGTTaGGGTTCAGGTTTTCGAACA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLLHRWC*GSGFRT
Trigger: TGTTCGAAAACCTGAACCCCAACACCATCTATGAAG...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTGGAAACTTCATAGATaGTGTTGGGGTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRWKLHR*CWGSGF
Trigger: AAAACCTGAACCCCAACACCATCTATGAAGTTTCCA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATAGTGTAAGGAGTGTCTaGCTTCAGTTTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNSVRSV*LQFLQD
Trigger: GTCCTGCAGAAACTGAAGCCAGACACTCCTTACACT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCAGTGTTTAGAGGTTTaGTCTTGCCTCTTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNQCLEV*SCLFPS
Trigger: TGACGGGAAGAGGCAAGACCAAACCTCTAAACACTG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTACCGAGAGGCTATTaGTTGTTTCACCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLPRGY*LFHQRL
Trigger: GAGTCTTTGGTGAAACAACCAATAGCCTCTCGGTAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGTTCTGCCTGGGACTGTaGTATATTCATCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMFCLGL*YIHQLD
Trigger: ATCCAATTGATGAATATACCACAGTCCCAGGCAGAA...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCTGGCTGGTTGCGACTaGACTGGTAATCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNLAGCD*TGNHLE
Trigger: TTCCAAATGATTACCAGTCCAGTCGCAACCAGCCAG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGATGAGGTTTAAGGCAATATaGAACTGTATCCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: SVSKTRRFKAIWNCIPLMRFKAI*NCIPLM
Trigger: CATCAACGGGATACAGTTCCATATTGCCTTAAACCT...CATCAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTGGGGTTCCTACAATaGCAACAACGTACCTGGATA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLGFLQ*QQRTWI
Trigger: TATCCAGGTACGTTGTTGCCATTGTAGGAACCCCAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
3UTR CAA 72 bp GCTGTGCTAACTAAAGGCACACGGCATGTTCTCTCTTaGCAGCTTTTGTTAACAAAGTATTTTGCAAGCATT +
Preference number: 4 (lower is better)
Translates to: AVLTKGTRHVLS*QLLLTKYFASI
Trigger: AATGCTTGCAAAATACTTTGTTAACAAAAGCTGCAAAGAGAGAACATGCCGTGTGCCTTTAGTTAGCACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGAACTGGTTTTGCCCATaGCATATGAACAGTATTTTC +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRNWFCP*HMNSIF
Trigger: GAAAATACTGTTCATATGTCATGGGCAAAACCAGTT...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCACAAAGTTGGCCACATTaGAAACATGGTTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSQSWPH*KHGSVK
Trigger: CTTCACTGAACCATGTTTTCAATGTGGCCAACTTTG...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGTCTTCTCCATTATTaGAATGGGTTCACTGGATGT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSLLHY*NGFTGC
Trigger: ACATCCAGTGAACCCATTTCAATAATGGAGAAGACT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGACTCTCCCTGGAGCTTaGGTCCAAGTAATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKTLPGA*VQVILK
Trigger: TTTCAAAATTACTTGGACTCAAGCTCCAGGGAGAGT...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAACTCTCCCTGGAGCTTaGGTCCAAGTAATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSTLPGA*VQVILK
Trigger: TTTCAAAATTACTTGGACTCAAGCTCCAGGGAGAGT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCCACTGGGGTATATGTaGCGAGATACTGTTTCACTT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNPLGYM*RDTVSL
Trigger: AAGTGAAACAGTATCTCGTCACATATACCCCAGTGG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTTAGTAACTAAATCTTaGGGAGAACCACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRLVTKS*GEPRSS
Trigger: TGAAGAACGTGGTTCTCCTCAAGATTTAGTTACTAA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCACTATCCTGGAGAGTaGCTCAAAATCTGCCACATT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNHYPGE*LKICHI
Trigger: AATGTGGCAGATTTTGAGTCACTCTCCAGGATAGTG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACCCTCTGAAACCCTCTaGTGTTACTTCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSPSETL*CYFSNL
Trigger: AAGATTACTGAAGTAACATCAGAGGGTTTCAGAGGG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATAGGTGGTGCTGGGATTaGGATTGTGTAAGGTATATG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNRWCWD*DCVRYM
Trigger: CATATACCTTACACAATCTCAATCCCAGCACCACCT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTATAATGTAGTGCCTTaGTCTGTCAAGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNYNVVP*SVKGTL
Trigger: CAGTGTCCCCTTGACAGATCAAGGCACTACATTATA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCAAATGAGAGGACAACTTaGAGTGGCAGTTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSNERTT*SGSFTN
Trigger: GTTTGTGAAACTGCCACTTCAAGTTGTCCTCTCATT...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCATTTTAAAACCTGGTaGGGTGTAGCCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVHFKTW*GVAIQI
Trigger: TATTTGGATGGCTACACCTCACCAGGTTTTAAAATG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAATTACTAGCATGCTTTaGAGTCCCAAGAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLITSML*SPKRSK
Trigger: CTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAAT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGAGTTCTTTTGCATCTaGAGCTTTAATGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSEFFCI*SFNAQG
Trigger: TCCTTGGGCATTAAAGCTGCAGATGCAAAAGAACTC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCAAGTTTGCAATCCCAATaGTATAGGAGCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSSLQSQ*YRSHQP
Trigger: TGGTTGATGGCTCCTATAGCATTGGGATTGCAAACT...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAAAGTTTGCCACAGCTTaGAACAAGCTCTTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSKFATA*NKLFLS
Trigger: AGACAAGAAGAGCTTGTTGCAAGCTGTGGCAAACTT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTACTTGGACATTTCTTaGCAGTCCTCTCATCAATGT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVYLDIS*QSSHQC
Trigger: ACATTGATGAGAGGACTGGCAAGAAATGTCCAAGTA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTTACATTGTTTCTTCTaGCTGGGACTGTGGTATATT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRLHCFF*LGLWYI
Trigger: AATATACCACAGTCCCAGGCAGAAGAAACAATGTAA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATGTGATTTGCCAAATTaGAAAAGGGTCACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSCDLPN*KRVTGS
Trigger: ACTCCCAGTGACCCTTTTGCAATTTGGCAAATCACA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGTCCTGTGTACATGTaGAAGAATTTGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVCPVYM*KNLEKQ
Trigger: CTGCTTTTCCAAATTCTTGCACATGTACACAGGACA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCACAGACTTGTCTTaGAACTGCTCGCATCATGTT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFTDLS*NCSHHV
Trigger: AACATGATGCGAGCAGTTGCAAGACAAGTCTGTGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp GTTAGTGTGTCTAAAACAAGGAGGTTTAAGGCAATATGGAACTGTATCCCGTTGAGTAAACACAATCATTaGACAAATACTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VSVSKTRRFKAIWNCIPLSKHNH*TNTWEG
Trigger: CCCTTCCCAAGTATTTGTGCAATGATTGTGTTTACT...CAACGGGATACAGTTCCATATTGCCTTAAACCTCCTTGTTTTAGACACACTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACAAAATGTCTACAGACTaGGTGCTTGGAGCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHKMSTD*VLGARL
Trigger: AAGCCTAGCTCCAAGCACGCAGTCTGTAGACATTTT...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATACGAAGCTCTCTTGCTaGAATTTCCACTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNTKLSC*NFHFIL
Trigger: CAGGATGAAGTGGAAATTCCAGCAAGAGAGCTTCGT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTGAAATGGGTTCACTaGATGTCATTCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLKWVH*MSFPSW
Trigger: CCATGAAGGGAATGACATCCAGTGAACCCATTTCAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTGCACAAGACTAATCTaGACCCTATTTGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRCTRLI*TLFGEI
Trigger: AATTTCACCAAATAGGGTCCAGATTAGTCTTGTGCA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AAAATAAGTATAGCAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGCTGAAATTCTGTATTTaGTCTCTGGCTGCAGATTTT +
Preference number: 4 (lower is better)
Translates to: KISIAKDKLPARNTQQLWLKFCI*SLAADF
Trigger: AAAATCTGCAGCCAGAGACCAAATACAGAATTTCAG...CCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTGCTATACTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGGCCACATTGTATGCATaGGTATCATCAGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKATLYA*VSSGSV
Trigger: AACTGATCCTGATGATACCCATGCATACAATGTGGC...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGATCATCCACTATCCTaGAGAGTGACTCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSDHPLS*RVTQNL
Trigger: CAGATTTTGAGTCACTCTCCAGGATAGTGGATGATC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTGGAAACTTCATAGATaGTGTTGGGGTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVWKLHR*CWGSGF
Trigger: AAAACCTGAACCCCAACACCATCTATGAAGTTTCCA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGTAGGATTGTATACTTaGACATTTCTTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVVGLYT*TFLASP
Trigger: AGGACTGGCAAGAAATGTCCAAGTATACAATCCTAC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGTATATTCATCAATTaGATCACCAACAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGIFIN*ITNSGR
Trigger: TCTCCCACTGTTGGTGATCCAATTGATGAATATACC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCTGCCTGGGACTGTaGTATATTCATCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFCLGL*YIHQLD
Trigger: ATCCAATTGATGAATATACCACAGTCCCAGGCAGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGATTGTTTCTTCTGCCTaGGACTGTGGTATATTCATC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVIVSSA*DCGIFI
Trigger: GATGAATATACCACAGTCCCAGGCAGAAGAAACAAT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGAACAGTAATTTTATATaGAGTGTCAGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVNSNFI*SVRLQG
Trigger: CCCCTGCAACCTGACACTCCATATAAAATTACTGTT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAACAGTAATTTTATATaGAGTGTCAGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLNSNFI*SVRLQG
Trigger: CCCCTGCAACCTGACACTCCATATAAAATTACTGTT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTGGTCCCTCGAGATTTaGTGTCTGCACAAAAACAGT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNWSLEI*CLHKNS
Trigger: ACTGTTTTTGTGCAGACACCAAATCTCGAGGGACCA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTGTAGGGGCTTCTGTTaGTTTCACAGTGGTATGTTC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNCRGFC*FHSGMF
Trigger: GAACATACCACTGTGAAACCAACAGAAGCCCCTACA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGAGGACAACTTGAAGTaGCAGTTTCACAAACAAATG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVEDNLK*QFHKQM
Trigger: CATTTGTTTGTGAAACTGCCACTTCAAGTTGTCCTC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACAATGTCAAAACTCTaGATTTGGAATGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTMSKL*IWNAAD
Trigger: ATCAGCCGCATTCCAAATCCAGAGTTTTGACATTGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAACAATGTCAAAACTCTaGATTTGGAATGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLTMSKL*IWNAAD
Trigger: ATCAGCCGCATTCCAAATCCAGAGTTTTGACATTGT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACATGTGCAAGAATTTaGAAAAGCAGGGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTCARI*KSRAFS
Trigger: GGAAAATGCCCTGCTTTTCCAAATTCTTGCACATGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
3UTR CAA 72 bp AAGCGGCAGGCTTTGATGCAGAAGCTTATTGTAGAATaGTTAAGTGATTTTAGTCGACAGGATCACATACAA +
Preference number: 4 (lower is better)
Translates to: KRQALMQKLIVE*LSDFSRQDHIQ
Trigger: TTGTATGTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAAAGCCTGCCGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATTCAGTGGTACTAGCTaGAAGGGTAAATTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLFSGTS*KGKFFS
Trigger: ACTAAAGAATTTACCCTTTCAGCTAGTACCACTGAA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTATATCCACACCACGTaGGCATTCCACTTGAACTTT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNYIHTT*AFHLNF
Trigger: AAAGTTCAAGTGGAATGCTCACGTGGTGTGGATATA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGAGACCAGTTGGTTTTaGAACCATAAGAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSETSWF*NHKKSL
Trigger: AAGTGACTTCTTATGGTTTCAAAACCAACTGGTCTC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATTTTCTATCATCGTATaGATTGCATCTTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLFSIIV*IASSGR
Trigger: TCTGCCTGAAGATGCAATTCATACGATGATAGAAAA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTCAACATCGTCTTGTaGTTTTCCATCAGTAATGAG +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFNIVL*FSISNE
Trigger: CTCATTACTGATGGAAAATCACAAGACGATGTTGAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR TCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATTCAACATCGTCTTGTaGTTTTCCATCAGTAATGAG +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLFNIVL*FSISNE
Trigger: CTCATTACTGATGGAAAATCACAAGACGATGTTGAA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACATCCTTGAGTTTCTTTaGAGGTGCTTCAACATCGTC +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHILEFL*RCFNIV
Trigger: GACGATGTTGAAGCACCTTCAAAGAAACTCAAGGAT...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATATCCTTGAGTTTCTTTaGAGGTGCTTCAACATCGTC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNILEFL*RCFNIV
Trigger: GACGATGTTGAAGCACCTTCAAAGAAACTCAAGGAT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGTAAGGGGAGGTTTATaGTGTGATTTGGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSVRGGL*CDLVNA
Trigger: TGCATTTACCAAATCACATCATAAACCTCCCCTTAC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTCTGACATAAGTCATTaGTTTGCCAGTATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSDISH*FASICR
Trigger: TCTACAAATACTGGCAAAGCAATGACTTATGTCAGA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAATAGCTGCCAATTCTTaGTCAATTCTAAGGCAGATA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLIAANS*SILRQI
Trigger: TATCTGCCTTAGAATTGAGCAAGAATTGGCAGCTAT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTATGAGGTATCTGGCTaGAGATTCCTAAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNYEVSG*RFLRMA
Trigger: TGCCATTCTTAGGAATCTGCAGCCAGATACCTCATA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTACATTGTTTCTTCTaGCTGGGACTGTGGTATATT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVLHCFF*LGLWYI
Trigger: AATATACCACAGTCCCAGGCAGAAGAAACAATGTAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATGTCCTGTGTACATGTaGAAGAATTTGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSCPVYM*KNLEKQ
Trigger: CTGCTTTTCCAAATTCTTGCACATGTACACAGGACA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAAGTCAATTACTAGCATaGTTTGAAGTCCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLSQLLA*FEVPRE
Trigger: TTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGCAATTTGTACTCTTTTaGGGCCAATGTCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVQFVLF*GQCQRL
Trigger: AAGTCTTTGACATTGGCCCCAAAAGAGTACAAATTG...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGTCCTGAAGTTCTGTTaGCGAATGAAATTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNVLKFC*RMKFKA
Trigger: GGCTTTGAATTTCATTCGCCAACAGAACTTCAGGAC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGACTCTAAAAGAACGATaGGTTCGCTCAGAAATAACT +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVTLKER*VRSEIT
Trigger: AGTTATTTCTGAGCGAACCCATCGTTCTTTTAGAGT...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAACTCTAAAAGAACGATaGGTTCGCTCAGAAATAACT +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLTLKER*VRSEIT
Trigger: AGTTATTTCTGAGCGAACCCATCGTTCTTTTAGAGT...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTTTCCCTCCAGAAACTaGATAGTATTCCACCTTATA +
Preference number: 4 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVFPSRN*IVFHLI
Trigger: TATAAGGTGGAATACTATCCAGTTTCTGGAGGGAAA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CCA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTATTTCCCTCCAGAAACTaGATAGTATTCCACCTTATA +
Preference number: 4 (lower is better)
Translates to: KSQLLACFEVPREVRGGLFPSRN*IVFHLI
Trigger: TATAAGGTGGAATACTATCCAGTTTCTGGAGGGAAA...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGTAGGATTGTATACTTaGACATTTCTTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSVGLYT*TFLASP
Trigger: AGGACTGGCAAGAAATGTCCAAGTATACAATCCTAC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGGTATATTCATCAATTaGATCACCAACAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSGIFIN*ITNSGR
Trigger: TCTCCCACTGTTGGTGATCCAATTGATGAATATACC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCTGCCTGGGACTGTaGTATATTCATCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFCLGL*YIHQLD
Trigger: ATCCAATTGATGAATATACCACAGTCCCAGGCAGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTGTTTCTTCTGCCTaGGACTGTGGTATATTCATC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSIVSSA*DCGIFI
Trigger: GATGAATATACCACAGTCCCAGGCAGAAGAAACAAT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAGAGGACAACTTGAAGTaGCAGTTTCACAAACAAATG +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSEDNLK*QFHKQM
Trigger: CATTTGTTTGTGAAACTGCCACTTCAAGTTGTCCTC...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCAGTAGGTGATGTGATATaGAAAAACATTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSVGDVI*KNIFSS
Trigger: GCTGGAGAAAATGTTTTTTCATATCACATCACCTAC...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCATTTTAAAACCTGGTaGGGTGTAGCCATCCAAATA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNHFKTW*GVAIQI
Trigger: TATTTGGATGGCTACACCTCACCAGGTTTTAAAATG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGGGAGGTTTATGATGTaGTTTGGTAAATGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNGRFMM*FGKCRN
Trigger: GTTTCTGCATTTACCAAATCACATCATAAACCTCCC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTGTTTGAGTTCTTTTaGATCTGCAGCTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLFEFF*ICSFNA
Trigger: GGCATTAAAGCTGCAGATGCAAAAGAACTCAAACAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp CCAAGTAACTGTTTATGCCTTCAAACTCCTCAATTCAAAGAACAACTTGGAAAGTATTTGGTCTCTGGCTaGAGATTTTCTATCATCGTA +
Preference number: 4 (lower is better)
Translates to: PSNCLCLQTPQFKEQLGKYLVSG*RFSIIV
Trigger: TACGATGATAGAAAATCTGCAGCCAGAGACCAAATA...CTTTCCAAGTTGTTCTTTGAATTGAGGAGTTTGAAGGCATAAACAGTTACTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTTCCACTTCATCCTaGGATTTTCCATCCGTAATA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSISTSS*DFPSVI
Trigger: TATTACGGATGGAAAATCCCAGGATGAAGTGGAAAT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATCTCCATTATTGAAATaGGTTCACTGGATGTCATTC +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSSPLLK*VHWMSF
Trigger: GAATGACATCCAGTGAACCCATTTCAATAATGGAGA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCAAAAACTAAGATCCTTTaGAGGGACGTAAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSKTKIL*RDVSFL
Trigger: AAGAAAGCTTACGTCCCTCCAAAGGATCTTAGTTTT...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAAAAACTAAGATCCTTTaGAGGGACGTAAGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSKTKIL*RDVSFL
Trigger: AAGAAAGCTTACGTCCCTCCAAAGGATCTTAGTTTT...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATAACATTTTCTCCAGCTaGAGACCAGTTGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNNIFSS*RPVGFE
Trigger: TTCAAAACCAACTGGTCTCCAGCTGGAGAAAATGTT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTCTCCACCAGCAACTaGTCTATATATAATTCGATA +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLSTSN*SIYNSI
Trigger: TATCGAATTATATATAGACCAGTTGCTGGTGGAGAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCATTCATATTTCGTGTCTaGAATCAAGTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSFIFRV*NQVLQC
Trigger: ACACTGGAGAACTTGATTCCAGACACGAAATATGAA...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TCAGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCACTGAAATTCTGTATTTaGTCTCTGGCTGCAGATTTT +
Preference number: 4 (lower is better)
Translates to: SELKELLSSRHLQISLPSLKFCI*SLAADF
Trigger: AAAATCTGCAGCCAGAGACCAAATACAGAATTTCAG...TGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCTCCACTGCTGTAAGTaGCAAATACTGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNLHCCK*QILKFC
Trigger: ACAGAATTTCAGTATTTGCCACTTACAGCAGTGGAG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACGAGGACAACTTGAAGTaGCAGTTTCACAAACAAATG +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHEDNLK*QFHKQM
Trigger: CATTTGTTTGTGAAACTGCCACTTCAAGTTGTCCTC...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATACATGTGCAAGAATTTaGAAAAGCAGGGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNTCARI*KSRAFS
Trigger: GGAAAATGCCCTGCTTTTCCAAATTCTTGCACATGT...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGTAGGTGATGTGATATaGAAAAACATTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNVGDVI*KNIFSS
Trigger: GCTGGAGAAAATGTTTTTTCATATCACATCACCTAC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR TCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATGTAAGTGGCAAATACTaGAATTCTGTATTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNVSGKY*NSVFGL
Trigger: GAGACCAAATACAGAATTTCAGTATTTGCCACTTAC...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TTTCCTAATAAGCACGTGCGCAAACATCTCAGAAACAGGATTTTCATGTATTCATCTGACATAAGTCATTaGTTTGCCAGTATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FPNKHVRKHLRNRIFMYSSDISH*FASICR
Trigger: TCTACAAATACTGGCAAAGCAATGACTTATGTCAGA...TGAATACATGAAAATCCTGTTTCTGAGATGTTTGCGCACGTGCTTATTAGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR GCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTATTTGGTCTCTGGCTaGAGATTTTCTATCATCGTA +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNYLVSG*RFSIIV
Trigger: TACGATGATAGAAAATCTGCAGCCAGAGACCAAATA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR GCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACTTACATTGTTTCTTCTaGCTGGGACTGTGGTATATT +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHLHCFF*LGLWYI
Trigger: AATATACCACAGTCCCAGGCAGAAGAAACAATGTAA...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATTCTGTATTTGGTCTCTaGCTGCAGATTTTCTATCAT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNSVFGL*LQIFYH
Trigger: ATGATAGAAAATCTGCAGCCAGAGACCAAATACAGA...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCAATTTGTACTCTTTTaGGGCCAATGTCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNQFVLF*GQCQRL
Trigger: AAGTCTTTGACATTGGCCCCAAAAGAGTACAAATTG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CCA 90 bp TTGATGCAGAAGCTTATTGTAGAATTGTTAAGTGATTTTAGTCGACAGGATCACCTACTTTCAGGGTTTTaGAATCTTGAGATAATTCAG +
Preference number: 4 (lower is better)
Translates to: LMQKLIVELLSDFSRQDHLLSGF*NLEIIQ
Trigger: CTGAATTATCTCAAGATTCCAAAACCCTGAAAGTAG...GTGATCCTGTCGACTAAAATCACTTAACAATTCTACAATAAGCTTCTGCATCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CCA 90 bp AGAACTGAAAGAGTTGTTATCTTCAAGACATCTTCAAATCAGCCTTCCTTCAATCTACTTTCAGGGTTTTaGAATCTTGAGATAATTCAG +
Preference number: 4 (lower is better)
Translates to: RTERVVIFKTSSNQPSFNLLSGF*NLEIIQ
Trigger: CTGAATTATCTCAAGATTCCAAAACCCTGAAAGTAG...ATTGAAGGAAGGCTGATTTGAAGATGTCTTGAAGATAACAACTCTTTCAGTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS GCA 90 bp AAGCTGGTGCTCGGTGTGGCCCCCACACGCCCCGGCGATAGGCGCTaGACTCCAGGAGCACCTGGCGGCCGCCGAGGCGTGGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KLVLGVAPTRPGDRR*TPGAPGGRRGVGSC
Trigger: GCAGCTGCCCACGCCTCGGCGGCCGCCAGGTGCTCCTGGAGTGCAGCGCCTATCGCCGGGGCGTGTGGGGGCCACACCGAGCACCAGCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000680102.1
CDS GCA 90 bp GAGGTAGCGGCGGCGACAGCGGCTTCCCGGCGTCGGAGAAGCTGGTaGTCGGTGTGGCCCCCACACGCCCCGGCGATAGGCGCTGCACTC +
Preference number: 5 (lower is better)
Translates to: EVAAATAASRRRRSW*SVWPPHAPAIGAAL
Trigger: GAGTGCAGCGCCTATCGCCGGGGCGTGTGGGGGCCACACCGAGCACCAGCTTCTCCGACGCCGGGAAGCCGCTGTCGCCGCCGCTACCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000680102.1
CDS CCA 90 bp GCGGCGACAGCGGCTTCCCGGCGTCGGAGAAGCTGGTGCTCGGTGTaGCCCCCACACGCCCCGGCGATAGGCGCTGCACTCCAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: AATAASRRRRSWCSV*PPHAPAIGAALQEH
Trigger: GTGCTCCTGGAGTGCAGCGCCTATCGCCGGGGCGTGTGGGGGCCACACCGAGCACCAGCTTCTCCGACGCCGGGAAGCCGCTGTCGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000680102.1
CDS CCA 90 bp GGAGAGGTAGCGGCGGCGACAGCGGCTTCCCGGCGTCGGAGAAGCTaGTGCTCGGTGTGGCCCCCACACGCCCCGGCGATAGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: GEVAAATAASRRRRS*CSVWPPHAPAIGAA
Trigger: TGCAGCGCCTATCGCCGGGGCGTGTGGGGGCCACACCGAGCACCAGCTTCTCCGACGCCGGGAAGCCGCTGTCGCCGCCGCTACCTCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000680102.1
CDS GCA 90 bp GGGCCACACGGCGCCGTTTTGGAAACCCATCTCGGAGCGCCCCACTaGCTCCGCGGGAAGGTCCGACGCACCCGGCTGTCCCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GPHGAVLETHLGAPH*LRGKVRRTRLSLRE
Trigger: CTCCCTCAGGGACAGCCGGGTGCGTCGGACCTTCCCGCGGAGGCAGTGGGGCGCTCCGAGATGGGTTTCCAAAACGGCGCCGTGTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp GGAGGAGGAGAATCCCAGGAGGAGAGGCGGGCGCGGCAGGAAGACTaGAGATGGCCTGAGCCTGCAGCTGCCGGCGCGCGGACGCGTCTG +
Preference number: 5 (lower is better)
Translates to: GGGESQEERRARQED*RWPEPAAAGARTRL
Trigger: CAGACGCGTCCGCGCGCCGGCAGCTGCAGGCTCAGGCCATCTCCAGTCTTCCTGCCGCGCCCGCCTCTCCTCCTGGGATTCTCCTCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000680102.1
CDS GCA 90 bp TCGCAGCCCCGAGCCAGGTGGTTGGTTACCAGCCAAGCGAGCGAGTaGGCCCGCTCTTCGGGGCTCCTGGGTGCCACCCGGAGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SQPRARWLVTSQASE*ARSSGLLGATRRCP
Trigger: AGGACACCTCCGGGTGGCACCCAGGAGCCCCGAAGAGCGGGCGCACTCGCTCGCTTGGCTGGTAACCAACCACCTGGCTCGGGGCTGCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp CGCGGGAAGGTCCGACGCACCCGGCTGTCCCTGAGGGAGGCAGGATaGAGCAAGGGCAGGACACTGGAGGTGGTGCCCAGCAACTCCGGC +
Preference number: 5 (lower is better)
Translates to: RGKVRRTRLSLREAG*SKGRTLEVVPSNSG
Trigger: GCCGGAGTTGCTGGGCACCACCTCCAGTGTCCTGCCCTTGCTCCATCCTGCCTCCCTCAGGGACAGCCGGGTGCGTCGGACCTTCCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS TCA 90 bp TGCTTGGCTGCTGGCTCATCTGCCCGCACCGTCCGCCCCGCCGACTaGGCTCCCCACAAAGCACACAGAGGCGCAGAGCCAGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: CLAAGSSARTVRPAD*APHKAHRGAEPALL
Trigger: CAACAGCGCTGGCTCTGCGCCTCTGTGTGCTTTGTGGGGAGCTCAGTCGGCGGGGCGGACGGTGCGGGCAGATGAGCCAGCAGCCAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp CTCAATGGAAGACAGGAGCAGGGCCGCGCCCAGGGCGGCAAGCGCTaGGGGAAGCCTACTCCGCATCCTTGGCCTCCGAGCTTACAGCGG +
Preference number: 5 (lower is better)
Translates to: LNGRQEQGRAQGGKR*GKPTPHPWPPSLQR
Trigger: CCGCTGTAAGCTCGGAGGCCAAGGATGCGGAGTAGGCTTCCCCCAGCGCTTGCCGCCCTGGGCGCGGCCCTGCTCCTGTCTTCCATTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000483888.6
ENST00000680102.1
CDS GCA 90 bp CGCGACCCTAGGTCGTGCGAACACCTGGGGTCCCGGATCTCCGCTTaGCTGCCATCATCCCCCAGGCTGCTTGGCTGCTGGCTCATCTGC +
Preference number: 5 (lower is better)
Translates to: RDPRSCEHLGSRISA*LPSSPRLLGCWLIC
Trigger: GCAGATGAGCCAGCAGCCAAGCAGCCTGGGGGATGATGGCAGGCAAGCGGAGATCCGGGACCCCAGGTGTTCGCACGACCTAGGGTCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp GCTGCCGGCGCGCGGACGCGTCTGGGGCGGTTCGCCTTAGCCAAGTaGAAAGAGACTCCGCGCCGCGGGCTACTTAATAGAGGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: AAGARTRLGRFALAK*KETPRRGLLNRGLF
Trigger: GAACAGCCCTCTATTAAGTAGCCCGCGGCGCGGAGTCTCTTTCCACTTGGCTAAGGCGAACCGCCCCAGACGCGTCCGCGCGCCGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS TCA 90 bp GGGGAAGCCTACTCCGCATCCTTGGCCTCCGAGCTTACAGCGGCATaGAGAGATCTGAGGCGGCGGCAACAGGGAGAGGTAGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: GEAYSASLASELTAA*RDLRRRQQGEVAAA
Trigger: CGCCGCCGCTACCTCTCCCTGTTGCCGCCGCCTCAGATCTCTTCATGCCGCTGTAAGCTCGGAGGCCAAGGATGCGGAGTAGGCTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000483888.6
ENST00000680102.1
CDS GCA 90 bp AGGGCAGGACACTGGAGGTGGTGCCCAGCAACTCCGGCGCGCGCTTaGTTCCCAGGCTGGAAACCTTGGCCCAGGCTCAACCTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: RAGHWRWCPATPARA*FPGWKPWPRLNLSE
Trigger: CTCAGACAGGTTGAGCCTGGGCCAAGGTTTCCAGCCTGGGAAGCAAGCGCGCGCCGGAGTTGCTGGGCACCACCTCCAGTGTCCTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp AGGCCCAGGTTCTCCTCTGGCTCCTGCGCTACCAGGAGGTCCCGGTaGACCCGGCGGGCCTGGCTGGTTGCGACTGGACTGGTAATCATT +
Preference number: 5 (lower is better)
Translates to: RPRFSSGSCATRRSR*TRRAWLVATGLVII
Trigger: AATGATTACCAGTCCAGTCGCAACCAGCCAGGCCCGCCGGGTCCACCGGGACCTCCTGGTAGCGCAGGAGCCAGAGGAGAACCTGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000425443.6
ENST00000483888.6
ENST00000511023.1
ENST00000680981.1
CDS CCA 90 bp TGGTTACCAGCCAAGCGAGCGAGTGCGCCCGCTCTTCGGGGCTCCTaGGTGCCACCCGGAGGTGTCCTGTTGGTTGCGCTGATTAGAGCC +
Preference number: 5 (lower is better)
Translates to: WLPAKRASAPALRGS*VPPGGVLLVALIRA
Trigger: GGCTCTAATCAGCGCAACCAACAGGACACCTCCGGGTGGCACCCAGGAGCCCCGAAGAGCGGGCGCACTCGCTCGCTTGGCTGGTAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp TGGAGGTGGTGCCCAGCAACTCCGGCGCGCGCTTGCTTCCCAGGCTaGAAACCTTGGCCCAGGCTCAACCTGTCTGAGCTGGACCAGTCC +
Preference number: 5 (lower is better)
Translates to: WRWCPATPARACFPG*KPWPRLNLSELDQS
Trigger: GGACTGGTCCAGCTCAGACAGGTTGAGCCTGGGCCAAGGTTTCCAGCCTGGGAAGCAAGCGCGCGCCGGAGTTGCTGGGCACCACCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS TCA 90 bp TTCGGGGCTCCTGGGTGCCACCCGGAGGTGTCCTGTTGGTTGCGCTaGTTAGAGCCGTCGCCCCCTCTCGGGCGGCTGGTCCTCTTATTA +
Preference number: 5 (lower is better)
Translates to: FGAPGCHPEVSCWLR*LEPSPPLGRLVLLL
Trigger: TAATAAGAGGACCAGCCGCCCGAGAGGGGGCGACGGCTCTAATCAGCGCAACCAACAGGACACCTCCGGGTGGCACCCAGGAGCCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS TCA 90 bp CGCTTGCTTCCCAGGCTGGAAACCTTGGCCCAGGCTCAACCTGTCTaGGCTGGACCAGTCCAGGCCACGCGCCTTGGAGCCCTGCTAACC +
Preference number: 5 (lower is better)
Translates to: RLLPRLETLAQAQPV*AGPVQATRLGALLT
Trigger: GGTTAGCAGGGCTCCAAGGCGCGTGGCCTGGACTGGTCCAGCTCAGACAGGTTGAGCCTGGGCCAAGGTTTCCAGCCTGGGAAGCAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS GCA 90 bp CTTGGAGCCCTGCTAACCAACAGGGACAGCCGCGACCCTAGGTCGTaGGAACACCTGGGGTCCCGGATCTCCGCTTGCCTGCCATCATCC +
Preference number: 5 (lower is better)
Translates to: LGALLTNRDSRDPRS*EHLGSRISACLPSS
Trigger: GGATGATGGCAGGCAAGCGGAGATCCGGGACCCCAGGTGTTCGCACGACCTAGGGTCGCGGCTGTCCCTGTTGGTTAGCAGGGCTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp TTTATTGTGTTCTGTCACCGAGGTCGCAGCCCCGAGCCAGGTGGTTaGTTACCAGCCAAGCGAGCGAGTGCGCCCGCTCTTCGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: FIVFCHRGRSPEPGG*LPAKRASAPALRGS
Trigger: GGAGCCCCGAAGAGCGGGCGCACTCGCTCGCTTGGCTGGTAACCAACCACCTGGCTCGGGGCTGCGACCTCGGTGACAGAACACAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp GCTTCCCAGGCTGGAAACCTTGGCCCAGGCTCAACCTGTCTGAGCTaGACCAGTCCAGGCCACGCGCCTTGGAGCCCTGCTAACCAACAG +
Preference number: 5 (lower is better)
Translates to: ASQAGNLGPGSTCLS*TSPGHAPWSPANQQ
Trigger: CTGTTGGTTAGCAGGGCTCCAAGGCGCGTGGCCTGGACTGGTCCAGCTCAGACAGGTTGAGCCTGGGCCAAGGTTTCCAGCCTGGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp GGTTCCTTGGTCCACTGCGTGGTAGCGTTCGGCCCTGGGCAGGGCTaGGATTTCCCTCTCCATCCGAGTACAGAGCCACAAGGTTCACGG +
Preference number: 5 (lower is better)
Translates to: GSLVHCVVAFGPGQG*DFPLHPSTEPQGSR
Trigger: CCGTGAACCTTGTGGCTCTGTACTCGGATGGAGAGGGAAATCCCAGCCCTGCCCAGGGCCGAACGCTACCACGCAGTGGACCAAGGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000483888.6
CDS CCA 90 bp GCCCCCTCTCGGGCGGCTGGTCCTCTTATTAGGCGGCAGTGCAGGTaGCAGTGTGGACAGCACACCGCAGAGACAAGCTCAAGAAGACCA +
Preference number: 5 (lower is better)
Translates to: APSRAAGPLIRRQCR*QCGQHTAETSSRRP
Trigger: TGGTCTTCTTGAGCTTGTCTCTGCGGTGTGCTGTCCACACTGCCACCTGCACTGCCGCCTAATAAGAGGACCAGCCGCCCGAGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp GTCTTTTATTGTGTTCTGTCACCGAGGTCGCAGCCCCGAGCCAGGTaGTTGGTTACCAGCCAAGCGAGCGAGTGCGCCCGCTCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: VFYCVLSPRSQPRAR*LVTSQASECARSSG
Trigger: CCCCGAAGAGCGGGCGCACTCGCTCGCTTGGCTGGTAACCAACCACCTGGCTCGGGGCTGCGACCTCGGTGACAGAACACAATAAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS-3UTR CAA 90 bp CAGGCTCGTCTGCGCCGTAGTCCTCGTATTCCGCTGTCCGCTCGGGCTCCACCGATACACAACGCGATATaGCAGCACAGGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: QARLRRSPRIPLSARAPPIHNAI*QHRSWS
Trigger: GCTCCAGGACCTGTGCTGCAATATCGCGTTGTGTAT...CGGTGGAGCCCGAGCGGACAGCGGAATACGAGGACTACGGCGCAGACGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS CCA 90 bp TCTGGCTCCTGCGCTACCAGGAGGTCCCGGTGGACCCGGCGGGCCTaGCTGGTTGCGACTGGACTGGTAATCATTTGGAATCTGATTCAG +
Preference number: 5 (lower is better)
Translates to: SGSCATRRSRWTRRA*LVATGLVIIWNLIQ
Trigger: CTGAATCAGATTCCAAATGATTACCAGTCCAGTCGCAACCAGCCAGGCCCGCCGGGTCCACCGGGACCTCCTGGTAGCGCAGGAGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000425443.6
ENST00000483888.6
ENST00000511023.1
ENST00000680981.1
CDS-3UTR CAA 90 bp TCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATGAAGGGCTCGCGCTCATCCTATTGTGGTCGTTaGCTCATTGCCTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: SYSAVRSGSTGTMKGSRSSYCGR*LIAFPC
Trigger: ACAGGGGAAGGCAATGAGCAAACGACCACAATAGGA...TGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS GCA 90 bp GCTCTCAGTTTACTCGGTTACGAAACGCCTGAGAAGGTGGACGGCTaGCACGGGGTGATGTATGCTCCTCCGGCGGTGAAGGAGGTCTAC +
Preference number: 5 (lower is better)
Translates to: ALSLLGYETPEKVDG*HGVMYAPPAVKEVY
Trigger: GTAGACCTCCTTCACCGCCGGAGGAGCATACATCACCCCGTGGCAGCCGTCCACCTTCTCAGGCGTTTCGTAACCGAGTAAACTGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp TTTCAACCCAGATGGACCTGGTCTGCCATGATCTCCAGGTTTTCCTaGCTTCCCACTTGGTCCTGTGACTCCTGGGGAGCCTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FQPRWTWSAMISRFS*LPTWSCDSWGAWAW
Trigger: CCAGGCCCAGGCTCCCCAGGAGTCACAGGACCAAGTGGGAAGCCAGGAAAACCTGGAGATCATGGCAGACCAGGTCCATCTGGGTTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CAA 90 bp TCGTATTCCGCTGTCCGCTCGGGCTCCACCGGCACGATGAAGGGCTCGCGCTCATCCACCTCTACCTCTTaGACATCCTCTTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SYSAVRSGSTGTMKGSRSSTSTS*TSSSGV
Trigger: AACACCAGAAGAGGATGTCAAAGAGGTAGAGGTGGA...TGAGCGCGAGCCCTTCATCGTGCCGGTGGAGCCCGAGCGGACAGCGGAATACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS GCA 90 bp CAAGGTCTCTGGCTTCAGGCTGCTGAGAACAACACTGGTGCTCGATaGTGGCTCCACCACAGTGACCTCATCATCCCCAGCCGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: QGLWLQAAENNTGAR*WLHHSDLIIPSRFL
Trigger: AAGGAAGCGGCTGGGGATGATGAGGTCACTGTGGTGGAGCCAGCATCGAGCACCAGTGTTGTTCTCAGCAGCCTGAAGCCAGAGACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000416123.6
ENST00000483888.6
ENST00000486533.1
CDS CCA 90 bp GGTCTCTGGCTTCAGGCTGCTGAGAACAACACTGGTGCTCGATGCTaGCTCCACCACAGTGACCTCATCATCCCCAGCCGCTTCCTTGTA +
Preference number: 5 (lower is better)
Translates to: GLWLQAAENNTGARC*LHHSDLIIPSRFLV
Trigger: TACAAGGAAGCGGCTGGGGATGATGAGGTCACTGTGGTGGAGCCAGCATCGAGCACCAGTGTTGTTCTCAGCAGCCTGAAGCCAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000416123.6
ENST00000483888.6
ENST00000486533.1
CDS CCA 90 bp TTTCAACCCAGATGGACCTGGTCTGCCATGATCTCCAGGTTTTCCTaGCTTCCCACTTGGTCCTGTGACTCCTGGGGAGCCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: FQPRWTWSAMISRFS*LPTWSCDSWGAWAS
Trigger: GGAAGCCCAGGCTCCCCAGGAGTCACAGGACCAAGTGGGAAGCCAGGAAAACCTGGAGATCATGGCAGACCAGGTCCATCTGGGTTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000425443.6
ENST00000511023.1
CDS TCA 90 bp TATTCTGTGTCTGCTGAGAGGTCGCGAACACTGAGCGTGGTTGTCTaGGGCCCCACACTCAGAGCGTGCTGTCGGCTTCCTGCAGTCATT +
Preference number: 5 (lower is better)
Translates to: YSVSAERSRTLSVVV*GPTLRACCRLPAVI
Trigger: AATGACTGCAGGAAGCCGACAGCACGCTCTGAGTGTGGGGCCTCAGACAACCACGCTCAGTGTTCGCGACCTCTCAGCAGACACAGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000416123.6
ENST00000483888.6
ENST00000486533.1
CDS GCA 90 bp CGTGGTTGTCTGAGGCCCCACACTCAGAGCGTGCTGTCGGCTTCCTaGAGTCATTGGTGTGAGGATGACTTTGTAGCCAGTCACTGGACT +
Preference number: 5 (lower is better)
Translates to: RGCLRPHTQSVLSAS*SHWCEDDFVASHWT
Trigger: AGTCCAGTGACTGGCTACAAAGTCATCCTCACACCAATGACTGCAGGAAGCCGACAGCACGCTCTGAGTGTGGGGCCTCAGACAACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000416123.6
ENST00000483888.6
ENST00000486533.1
CDS GCA 90 bp TCTGAGGGTCTTGTGCCATCCACAGGAGAATACACAACGCGATATTaGAGCACAGGTCCTGGAGCAGGGTCCCAGCGAACATCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SEGLVPSTGEYTTRY*STGPGAGSQRTSRL
Trigger: CAGCCTCGATGTTCGCTGGGACCCTGCTCCAGGACCTGTGCTGCAATATCGCGTTGTGTATTCTCCTGTGGATGGCACAAGACCCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000483888.6
CDS CCA 90 bp CTGAGGCCCCACACTCAGAGCGTGCTGTCGGCTTCCTGCAGTCATTaGTGTGAGGATGACTTTGTAGCCAGTCACTGGACTAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: LRPHTQSVLSASCSH*CEDDFVASHWTRRW
Trigger: CCATCTCCTAGTCCAGTGACTGGCTACAAAGTCATCCTCACACCAATGACTGCAGGAAGCCGACAGCACGCTCTGAGTGTGGGGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000416123.6
ENST00000483888.6
ENST00000486533.1
CDS CCA 90 bp GTTTGTTGGGGCTGGCACGGGTCGGGTAGTTTCTTGAGCAGTCACTaGAGGAGACTCCCCCTCGTCATGTACTGCAGAAACGCTGACTGT +
Preference number: 5 (lower is better)
Translates to: VCWGWHGSGSFLSSH*RRLPLVMYCRNADC
Trigger: ACAGTCAGCGTTTCTGCAGTACATGACGAGGGGGAGTCTCCTCCAGTGACTGCTCAAGAAACTACCCGACCCGTGCCAGCCCCAACAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000483888.6
CDS CCA 90 bp AACCCTGACTGCTGGATGACCAAAGCCGCCTTCTTGACCTCATCCTaGGACCGACCGTCCGTGACCACAACCAACACCTTAGGGACATTC +
Preference number: 5 (lower is better)
Translates to: NPDCWMTKAAFLTSS*DRPSVTTTNTLGTF
Trigger: GAATGTCCCTAAGGTGTTGGTTGTGGTCACGGACGGTCGGTCCCAGGATGAGGTCAAGAAGGCGGCTTTGGTCATCCAGCAGTCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000425443.6
ENST00000483888.6
CDS-3UTR CAA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGACAGTGTTTAGAGGTTaGGTCTTGCCTCTTCCCGTC +
Preference number: 5 (lower is better)
Translates to: NENFNTSPKPRGAARDLWTVFRG*VLPLPV
Trigger: GACGGGAAGAGGCAAGACCAAACCTCTAAACACTGT...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS GCA 90 bp GGCAAGGTGACTTCCCGAACAGTGACAGGTTCACTAGTGAGGTCGTaGAGGACAGCCTGGACTGTGACTGCATACTCCGTGTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: GKVTSRTVTGSLVRS*RTAWTVTAYSVLGT
Trigger: TGTTCCCAACACGGAGTATGCAGTCACAGTCCAGGCTGTCCTGCACGACCTCACTAGTGAACCTGTCACTGTTCGGGAAGTCACCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000474564.1
ENST00000483888.6
CDS CCA 90 bp TCCCGAACAGTGACAGGTTCACTAGTGAGGTCGTGCAGGACAGCCTaGACTGTGACTGCATACTCCGTGTTGGGAACAAGGTCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SRTVTGSLVRSCRTA*TVTAYSVLGTRSVS
Trigger: GCTGACTGACCTTGTTCCCAACACGGAGTATGCAGTCACAGTCCAGGCTGTCCTGCACGACCTCACTAGTGAACCTGTCACTGTTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000474564.1
ENST00000483888.6
CDS-3UTR CAA 90 bp CAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGGCCTACTCCGCATCCTaGGCCTCCGAGCTTACAGCG +
Preference number: 5 (lower is better)
Translates to: QEMRRFHLVLFRHRASGRAYSAS*ASELTA
Trigger: CGCTGTAAGCTCGGAGGCCAAGGATGCGGAGTAGGC...CCTGCCGCTTGCTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGCCGAGAGGCTATTGGTaGTTTCACCAAAGACTCTCA +
Preference number: 5 (lower is better)
Translates to: NENFNTSPKPRGAARDLWPRGYW*FHQRLS
Trigger: TGAGAGTCTTTGGTGAAACAACCAATAGCCTCTCGG...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACGGCCAGGGGGACCTCTaGAACCTGTGGACCCTGGTG +
Preference number: 5 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHGQGDL*NLWTLV
Trigger: CACCAGGGTCCACAGGTTCAAGAGGTCCCCCTGGCC...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS TCA 90 bp CATTCCCTTCATGGCGGAAACACTGATCTGGTATTCTGTGTCTGCTaGGAGGTCGCGAACACTGAGCGTGGTTGTCTGAGGCCCCACACT +
Preference number: 5 (lower is better)
Translates to: HSLHGGNTDLVFCVC*EVANTERGCLRPHT
Trigger: AGTGTGGGGCCTCAGACAACCACGCTCAGTGTTCGCGACCTCTCAGCAGACACAGAATACCAGATCAGTGTTTCCGCCATGAAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000416123.6
ENST00000483888.6
ENST00000486533.1
CDS GCA 90 bp ATTCCCGGGGATTGGTACCAGTTCCTCTGGACCACCTGCTGCTGGTaGATAGAAGAGCTTGTACTGACGAGGATTTCCCTCTGCATGGTC +
Preference number: 5 (lower is better)
Translates to: IPGDWYQFLWTTCCW*IEELVLTRISLCMV
Trigger: GACCATGCAGAGGGAAATCCTCGTCAGTACAAGCTCTTCTATGCACCAGCAGCAGGTGGTCCAGAGGAACTGGTACCAATCCCCGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000483888.6
CDS CCA 90 bp GGTATTCCCGGGGATTGGTACCAGTTCCTCTGGACCACCTGCTGCTaGTGCATAGAAGAGCTTGTACTGACGAGGATTTCCCTCTGCATG +
Preference number: 5 (lower is better)
Translates to: GIPGDWYQFLWTTCC*CIEELVLTRISLCM
Trigger: CATGCAGAGGGAAATCCTCGTCAGTACAAGCTCTTCTATGCACCAGCAGCAGGTGGTCCAGAGGAACTGGTACCAATCCCCGGGAATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000483888.6
CDS CCA 90 bp GCCATCCACAGGAGAATACACAACGCGATATTGCAGCACAGGTCCTaGAGCAGGGTCCCAGCGAACATCGAGGCTGTTAGGTGTAGGATT +
Preference number: 5 (lower is better)
Translates to: AIHRRIHNAILQHRS*SRVPANIEAVRCRI
Trigger: AATCCTACACCTAACAGCCTCGATGTTCGCTGGGACCCTGCTCCAGGACCTGTGCTGCAATATCGCGTTGTGTATTCTCCTGTGGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000483888.6
CDS CCA 90 bp GCTGAACTGGCCCATCAGCATGATCCCAGGCTACCGAGAGGCTATTaGTTGTTTCACCAAAGACTCTCAGGTTCCTTGGTCCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: AELAHQHDPRLPRGY*LFHQRLSGSLVHCV
Trigger: CACGCAGTGGACCAAGGAACCTGAGAGTCTTTGGTGAAACAACCAATAGCCTCTCGGTAGCCTGGGATCATGCTGATGGGCCAGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000483888.6
CDS GCA 90 bp GACAGGTTCACTAGTGAGGTCGTGCAGGACAGCCTGGACTGTGACTaGATACTCCGTGTTGGGAACAAGGTCAGTCAGCTGCATGTCATT +
Preference number: 5 (lower is better)
Translates to: DRFTSEVVQDSLDCD*ILRVGNKVSQLHVI
Trigger: AATGACATGCAGCTGACTGACCTTGTTCCCAACACGGAGTATGCAGTCACAGTCCAGGCTGTCCTGCACGACCTCACTAGTGAACCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000474564.1
ENST00000483888.6
CDS CCA 90 bp AGGGCCTTGCCTGTTCTTGTGTTTCCTCCTCTGTACCTAATATTCTaGAGGGCCCCAAGGGCTAGGGCCTTGTCATTGTACGTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RALPVLVFPPLYLIF*RAPRARALSLYVFS
Trigger: GCTGAACACGTACAATGACAAGGCCCTAGCCCTTGGGGCCCTCCAGAATATTAGGTACAGAGGAGGAAACACAAGAACAGGCAAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000425443.6
ENST00000483888.6
CDS-3UTR CAA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGGGTATCAGAGCTGTATaGAACAACTCCAACTCTTGT +
Preference number: 5 (lower is better)
Translates to: NENFNTSPKPRGAARDLWGIRAV*NNSNSC
Trigger: ACAAGAGTTGGAGTTGTTCAATACAGCTCTGATACC...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CAGACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAAGACTCTCAGGTTCCTaGGTCCACTGCGTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: QTACLELGFLQKQGSLQSRLSGS*VHCVVA
Trigger: CGCTACCACGCAGTGGACCAAGGAACCTGAGAGTCT...TGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACTCTGCCTTGGCCCCTTaGCATACATCCCGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHSALAP*HTSRAG
Trigger: ACCAGCCCGGGATGTATGCAAAGGGGCCAAGGCAGA...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGCTGACCACTTATCAATaGTTCACAGACTTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: NENFNTSPKPRGAARDLWLTTYQ*FTDLSC
Trigger: GCAAGACAAGTCTGTGAACAATTGATAAGTGGTCAG...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGGTAATTGCAATGGAGTaGACGTTTCCCTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: NENFNTSPKPRGAARDLWVIAME*TFPSFL
Trigger: CAAAAAGGAGGGAAACGTCAACTCCATTGCAATTAC...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS TCA 90 bp CACCTCTTTGGGTCTTGTTGGCTCTGTGTCCTTAACAGGTTTGTATaGCAAGATGTAGCCAGTAGCTCCTCCCACAGGCTGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: HLFGSCWLCVLNRFV*QDVASSSSHRLPLH
Trigger: GTGCAGTGGCAGCCTGTGGGAGGAGCTACTGGCTACATCTTGTCATACAAACCTGTTAAGGACACAGAGCCAACAAGACCCAAAGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000474564.1
ENST00000483888.6
CDS GCA 90 bp TGGACTGTGACTGCATACTCCGTGTTGGGAACAAGGTCAGTCAGCTaGATGTCATTCACTGTTGGCCCCAAACGCACCTCTTTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: WTVTAYSVLGTRSVS*MSFTVGPKRTSLGL
Trigger: AAGACCCAAAGAGGTGCGTTTGGGGCCAACAGTGAATGACATGCAGCTGACTGACCTTGTTCCCAACACGGAGTATGCAGTCACAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000474564.1
ENST00000483888.6
CDS GCA 90 bp TGCTGCTGGTGCATAGAAGAGCTTGTACTGACGAGGATTTCCCTCTaGATGGTCCCAGCGGACATTCAAGGTGCTGGTAGAAGGGTCATA +
Preference number: 5 (lower is better)
Translates to: CCWCIEELVLTRISL*MVPADIQGAGRRVI
Trigger: TATGACCCTTCTACCAGCACCTTGAATGTCCGCTGGGACCATGCAGAGGGAAATCCTCGTCAGTACAAGCTCTTCTATGCACCAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000483888.6
CDS-3UTR CAA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAGGGTCGGGTAGTTTCTaGAGCAGTCACTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: DCVLGARLPAETRFSTIRGSGSF*SSHWRR
Trigger: TCTCCTCCAGTGACTGCTCAAGAAACTACCCGACCC...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACGTGGTCGTTTGCTCATaGCCTTCCCCTGTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHVVVCS*PSPVEG
Trigger: GCCTTCCACAGGGGAAGGCAATGAGCAAACGACCAC...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGTGGTATTCCCGGGGATaGGTACCAGTTCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: QEMRRFHLVLFRHRASGRWYSRG*VPVPLD
Trigger: GTCCAGAGGAACTGGTACCAATCCCCGGGAATACCA...CCTGCCGCTTGCTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp TGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGACCAAAGCCGCCTTCTaGACCTCATCCTGGGACCGA +
Preference number: 5 (lower is better)
Translates to: CVLGARLPAETRFSTIRKTKAAF*TSSWDR
Trigger: TCGGTCCCAGGATGAGGTCAAGAAGGCGGCTTTGGT...CTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp AATGAGAATTTCAACACCTCCCCCAAGCCTCGCGGCGCGGCGCGTGATCTCTGGTACATGTGCAAGAATTaGGAAAAGCAGGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: NENFNTSPKPRGAARDLWYMCKN*EKQGIF
Trigger: GAAAATGCCCTGCTTTTCCAAATTCTTGCACATGTA...CCAGAGATCACGCGCCGCGCCGCGAGGCTTGGGGGAGGTGTTGAAATTCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCACATCCCTTGGCGACCTaGCTCTCCCGGAATAGAGAG +
Preference number: 5 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSHPLAT*LSRNRE
Trigger: CTCTCTATTCCGGGAGAGCAAGGTCGCCAAGGGATG...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp CAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGGGAACCTGGATAGCCTaGCCCGTTGTATGGGATGCT +
Preference number: 5 (lower is better)
Translates to: QEMRRFHLVLFRHRASGRGTWIA*PVVWDA
Trigger: AGCATCCCATACAACGGGCAAGGCTATCCAGGTTCC...CCTGCCGCTTGCTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTACTACAGACTGCGTGCTaGGAGCTAGGCTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLLQTAC*ELGFLQ
Trigger: CTGCAGGAAGCCTAGCTCCAAGCACGCAGTCTGTAG...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS TCA 90 bp AATGAAACTCCTCACGGTTCTAAAATTTGCCCGGCCGATGCTCCATaGTCCATCCACCAGCAACACAATGTCTGCCTCAGCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: NETPHGSKICPADAP*SIHQQHNVCLSSGE
Trigger: CTCACCAGAGCTGAGGCAGACATTGTGTTGCTGGTGGATGGATCATGGAGCATCGGCCGGGCAAATTTTAGAACCGTGAGGAGTTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000483888.6
CDS CCA 90 bp TGGATCACCAACAGTGGGAGAATAGATGATCCTGTACTGCTGAACTaGCCCATCAGCATGATCCCAGGCTACCGAGAGGCTATTGGTTGT +
Preference number: 5 (lower is better)
Translates to: WITNSGRIDDPVLLN*PISMIPGYREAIGC
Trigger: ACAACCAATAGCCTCTCGGTAGCCTGGGATCATGCTGATGGGCCAGTTCAGCAGTACAGGATCATCTATTCTCCCACTGTTGGTGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000483888.6
CDS-3UTR CAA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTACCCTGCAGCACCGTATaGGTTGTATCTCCCCTCACA +
Preference number: 5 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLPCSTV*VVSPLT
Trigger: TGTGAGGGGAGATACAACCAATACGGTGCTGCAGGG...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CAAAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAGGGCCTTGCCTGTTCTaGTGTTTCCTCCTCTGTACC +
Preference number: 5 (lower is better)
Translates to: QKINCPLEIHSSSGFQDLGPCLF*CFLLCT
Trigger: GGTACAGAGGAGGAAACACAAGAACAGGCAAGGCCC...TAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGATGCCGTTCACTTGGTTaGCTGGCAATGTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: DCVLGARLPAETRFSTIRCRSLG*LAMLAS
Trigger: GCTTGCCAACATTGCCAGCAAACCAAGTGAACGGCA...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS GCA 90 bp CACCGCAGAGACAAGCTCAAGAAGACCACACAGCACTGTACGGAATaGATTAAGCAGAATACGAAAGAGCTGGACCTGAGAGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: HRRDKLKKTTQHCTE*IKQNTKELDLRAGK
Trigger: TTTCCCAGCTCTCAGGTCCAGCTCTTTCGTATTCTGCTTAATGCATTCCGTACAGTGCTGTGTGGTCTTCTTGAGCTTGTCTCTGCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680102.1
CDS CCA 90 bp TTTCGAGCTCGAGGTCTCATGCCAGCTTGGGTCCTGAAGTTCTGTTaGCGAATGAAATTCAAAGCCATGCCTGTGAGAGTATTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: FRARGLMPAWVLKFC*RMKFKAMPVRVLPP
Trigger: AGGAGGCAATACTCTCACAGGCATGGCTTTGAATTTCATTCGCCAACAGAACTTCAGGACCCAAGCTGGCATGAGACCTCGAGCTCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000483888.6
CDS CCA 90 bp ACCATCAGGATACAGAGAGGATACGGTGATAGTGTAAGGAGTGTCTaGCTTCAGTTTCTGCAGGACCACACTGTTCTGCCGTCCTCCTAT +
Preference number: 5 (lower is better)
Translates to: TIRIQRGYGDSVRSV*LQFLQDHTVLPSSY
Trigger: ATAGGAGGACGGCAGAACAGTGTGGTCCTGCAGAAACTGAAGCCAGACACTCCTTACACTATCACCGTATCCTCTCTGTATCCTGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000483888.6
CDS CCA 90 bp TTTACTTCAGGTGAGTTGGGGTTCCTACAATGGCAACAACGTACCTaGATAGCCTTGCCCGTTGTATGGGATGCTGGCACACTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: FTSGELGFLQWQQRT*IALPVVWDAGTLRR
Trigger: TCTTCTCAGTGTGCCAGCATCCCATACAACGGGCAAGGCTATCCAGGTACGTTGTTGCCATTGTAGGAACCCCAACTCACCTGAAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CAA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTCAAGTTTGCCACAGCTaGCAACAAGCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVQVCHS*QQALLV
Trigger: GACAAGAAGAGCTTGTTGCAAGCTGTGGCAAACTTG...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACCCAAACGCACCTCTTaGGGTCTTGTTGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: CLELGFLQKQGSLQSERVPKRTS*GLVGSV
Trigger: CACAGAGCCAACAAGACCCAAAGAGGTGCGTTTGGG...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCAGCATGTCATTCACTGTaGGCCCCAAACGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSACHSL*APNAPL
Trigger: AAGAGGTGCGTTTGGGGCCAACAGTGAATGACATGC...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGATGTGAGAAGAGGTCTTaGAGGGAAGTGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: DCVLGARLPAETRFSTIRCEKRS*REVLVS
Trigger: AGAGACCAGCACTTCCCTCAAAGACCTCTTCTCACA...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTAGCTTGAACTCAGACTaGACCTCATCGCTGTATTGC +
Preference number: 5 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVSLNSD*TSSLYC
Trigger: GCAATACAGCGATGAGGTCAAGTCTGAGTTCAAGCT...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGGGCCTTGCCTGTTCTaGTGTTTCCTCCTCTGTACC +
Preference number: 5 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNGPCLF*CFLLCT
Trigger: GGTACAGAGGAGGAAACACAAGAACAGGCAAGGCCC...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGGCCAGGGGGACCTCTaGAACCTGTGGACCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVGQGDL*NLWTLV
Trigger: CACCAGGGTCCACAGGTTCAAGAGGTCCCCCTGGCC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CAA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACAGGCTCTGGATAGCCTaGCCCGTTGTATGGGATGCT +
Preference number: 5 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNRLWIA*PVVWDA
Trigger: AGCATCCCATACAACGGGCAAGGCTATCCAGAGCCT...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425443.6
CDS TCA 90 bp GAACACATGGGTCTCTGCAGGAGGAGAGGCAATAGCTTCCAATTCTaGGCGAACGGCATCCTTCACACCAACTGCAAAGATTTCAACATC +
Preference number: 5 (lower is better)
Translates to: EHMGLCRRRGNSFQF*ANGILHTNCKDFNI
Trigger: GATGTTGAAATCTTTGCAGTTGGTGTGAAGGATGCCGTTCGCTCAGAATTGGAAGCTATTGCCTCTCCTCCTGCAGAGACCCATGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000416123.6
ENST00000483888.6
ENST00000486533.1
CDS-3UTR CAA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGGCCTACTCCGCATCCTaGGCCTCCGAGCTTACAGCG +
Preference number: 5 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVAYSAS*ASELTA
Trigger: CGCTGTAAGCTCGGAGGCCAAGGATGCGGAGTAGGC...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CAA 90 bp AAAAGTCAATTACTAGCATGCTTTGAAGTCCCAAGAGAAGTAAGGGGAGGTTTAGCCTACTCCGCATCCTaGGCCTCCGAGCTTACAGCG +
Preference number: 5 (lower is better)
Translates to: KSQLLACFEVPREVRGGLAYSAS*ASELTA
Trigger: CGCTGTAAGCTCGGAGGCCAAGGATGCGGAGTAGGC...TAAACCTCCCCTTACTTCTCTTGGGACTTCAAAGCATGCTAGTAATTGACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CAA 90 bp CTCTGTCCGATTCAACATTACAATTATGGCATGATTTGGAAGGCACACACACACCCTCACAGTGACCTCTaGAGTTTCACCCCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: LCPIQHYNYGMIWKAHTHPHSDL*SFTPCH
Trigger: GTGGCAGGGGGTGAAACTCAAGAGGTCACTGTGAGG...GTGTGTGTGTGCCTTCCAAATCATGCCATAATTGTAATGTTGAATCGGACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACACCTTAGCAACCATTaGCTTCCCTCTCCCATGAGG +
Preference number: 5 (lower is better)
Translates to: CLELGFLQKQGSLQSERVHLSNH*LPSPMR
Trigger: CCTCATGGGAGAGGGAAGCAAATGGTTGCTAAGGTG...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp GGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACATGCCTGTGAGAGTATaGCCTCCTTTGTACGGCAAG +
Preference number: 5 (lower is better)
Translates to: GSLQSERVLLDEQRWKKHMPVRV*PPLYGK
Trigger: CTTGCCGTACAAAGGAGGCAATACTCTCACAGGCAT...GTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACAGGTCTCATGCCAGCTaGGGTCCTGAAGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNRSHAS*GPEVLL
Trigger: CAACAGAACTTCAGGACCCAAGCTGGCATGAGACCT...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp TCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACACTGCATACTCCGTGTaGGGAACAAGGTCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SCRNKVLYNQKGYSWMSNTAYSV*GTRSVS
Trigger: GCTGACTGACCTTGTTCCCAACACGGAGTATGCAGT...GTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CAAGAGATGAGGAGATTCCATTTGGTGTTATTCCGGCATAGAGCAAGCGGCAGGGCTACCGAGAGGCTATaGGTTGTTTCACCAAAGACT +
Preference number: 5 (lower is better)
Translates to: QEMRRFHLVLFRHRASGRATERL*VVSPKT
Trigger: AGTCTTTGGTGAAACAACCAATAGCCTCTCGGTAGC...CCTGCCGCTTGCTCTATGCCGGAATAACACCAAATGGAATCTCCTCATCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CAGCCTTCCTTCAATCCTAAGGAACTTCATTTCCGTAAAGTTCTTTACTTCAGGTCTGCCTTGGCCCCTTaGCATACATCCCGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: QPSFNPKELHFRKVLYFRSALAP*HTSRAG
Trigger: ACCAGCCCGGGATGTATGCAAAGGGGCCAAGGCAGA...CCTGAAGTAAAGAACTTTACGGAAATGAAGTTCCTTAGGATTGAAGGAAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483888.6
CDS-3UTR CAA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACGCTAGGGCCTTGTCATaGTACGTGTTCAGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNARALS*YVFSLN
Trigger: GTTCAAGCTGAACACGTACAATGACAAGGCCCTAGC...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp TGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTTGCCGTTCACTTGGTTaGCTGGCAATGTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: CRNKVLYNQKGYSWMSNACRSLG*LAMLAS
Trigger: GCTTGCCAACATTGCCAGCAAACCAAGTGAACGGCA...AGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATCATCCCTTGGCGACCTaGCTCTCCCGGAATAGAGAG +
Preference number: 5 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDHPLAT*LSRNRE
Trigger: CTCTCTATTCCGGGAGAGCAAGGTCGCCAAGGGATG...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp TGGTTGTTAAAGAGATGTATACGAGCATTCTATGCCCCGGCGTATAACAGAGATATCACCTTTCATCCCTaGGCGACCTTGCTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: WLLKRCIRAFYAPAYNRDITFHP*ATLLSR
Trigger: CCGGGAGAGCAAGGTCGCCAAGGGATGAAAGGTGAT...ATCTCTGTTATACGCCGGGGCATAGAATGCTCGTATACATCTCTTTAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAGTTCACAGACTTGTCTaGCAACTGCTCGCATCATGT +
Preference number: 5 (lower is better)
Translates to: DCVLGARLPAETRFSTIRVHRLV*QLLASC
Trigger: ACATGATGCGAGCAGTTGCAAGACAAGTCTGTGAAC...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp CTAAGAGTTTCACTGAGGCTGCCCGCTGTGCTAACTAAAGGCACACGGCATGTTCAATTGTTCACAGACTaGTCTTGCAACTGCTCGCAT +
Preference number: 5 (lower is better)
Translates to: LRVSLRLPAVLTKGTRHVQLFTD*SCNCSH
Trigger: ATGCGAGCAGTTGCAAGACAAGTCTGTGAACAATTG...AACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGAAACTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS TCA 90 bp TTAGTTTTAGCCTGTAGGAGGTGGCTGCCCGGTGAGGTGACCATTTaGCACAGAATGTATCCCACCCAATCTGGTAAGTTTTCAGATCTG +
Preference number: 5 (lower is better)
Translates to: LVLACRRWLPGEVTI*HRMYPTQSGKFSDL
Trigger: CAGATCTGAAAACTTACCAGATTGGGTGGGATACATTCTGTGTCAAATGGTCACCTCACCGGGCAGCCACCTCCTACAGGCTAAAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000483888.6
CDS CCA 90 bp GTAATGAGCACACCAATTTTTCGAGCTCGAGGTCTCATGCCAGCTTaGGTCCTGAAGTTCTGTTGGCGAATGAAATTCAAAGCCATGCCT +
Preference number: 5 (lower is better)
Translates to: VMSTPIFRARGLMPA*VLKFCWRMKFKAMP
Trigger: AGGCATGGCTTTGAATTTCATTCGCCAACAGAACTTCAGGACCCAAGCTGGCATGAGACCTCGAGCTCGAAAAATTGGTGTGCTCATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000419671.1
ENST00000483888.6
CDS CCA 90 bp GGGTCCCAGCGAACATCGAGGCTGTTAGGTGTAGGATTGTATACTTaGACATTTCTTGCCAGTCCTCTCATCAATGTCCTTCCAGTATCT +
Preference number: 5 (lower is better)
Translates to: GSQRTSRLLGVGLYT*TFLASPLINVLPVS
Trigger: AGATACTGGAAGGACATTGATGAGAGGACTGGCAAGAAATGTCCAAGTATACAATCCTACACCTAACAGCCTCGATGTTCGCTGGGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322507.13
ENST00000345356.10
ENST00000416123.6
ENST00000483888.6
CDS-3UTR CAA 90 bp GACTGCGTGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGACTGAGCAAGAGCAATTaGTACTCTTTTGGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: DCVLGARLPAETRFSTIRLSKSN*YSFGAN
Trigger: ATTGGCCCCAAAAGAGTACAAATTGCTCTTGCTCAG...TCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCACGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp CTCTACAATCAGAAAGGGTACTCCTGGATGAGCAACGCTGGAAGAAACACCTCATTTCGTGGGCCACTTTaGGGAGCTTGTGTTGTTAAG +
Preference number: 5 (lower is better)
Translates to: LYNQKGYSWMSNAGRNTSFRGPL*GACVVK
Trigger: CTTAACAACACAAGCTCCCAAAAGTGGCCCACGAAA...TGAGGTGTTTCTTCCAGCGTTGCTCATCCAGGAGTACCCTTTCTGATTGTAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp ACAGGATTTTCATGTATTCAAACTGTAAGCAGCACTGGCGACTTAGAAAATGTGTCTGCCTTGGCCCCTTaGCATACATCCCGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: TGFSCIQTVSSTGDLENVSALAP*HTSRAG
Trigger: ACCAGCCCGGGATGTATGCAAAGGGGCCAAGGCAGA...CACATTTTCTAAGTCGCCAGTGCTGCTTACAGTTTGAATACATGAAAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000345356.10
CDS-3UTR CAA 90 bp AAAGATAAACTGCCCGCTCGAAATACACAGCAGCTCTGGGTTCCAGGACTTAACAACACAATATCTGCCTaGGCCCCTTTGCATACATCC +
Preference number: 5 (lower is better)
Translates to: KDKLPARNTQQLWVPGLNNTISA*APLHTS
Trigger: GGATGTATGCAAAGGGGCCAAGGCAGATATTGTGTT...GTTAAGTCCTGGAACCCAGAGCTGCTGTGTATTTCGAGCGGGCAGTTTATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322507.13
CDS-3UTR CAA 90 bp TGCTTGGAGCTAGGCTTCCTGCAGAAACAAGGTTCTCTACAATCAGAAAGGGTAGCTAGGGCCTTGTCATaGTACGTGTTCAGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CLELGFLQKQGSLQSERVARALS*YVFSLN
Trigger: GTTCAAGCTGAACACGTACAATGACAAGGCCCTAGC...TACCCTTTCTGATTGTAGAGAACCTTGTTTCTGCAGGAAGCCTAGCTCCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322507.13
ENST00000425443.6
CDS-3UTR CAA 90 bp