RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL11A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000060718

Ensembl transcript IDs: ENST00000353414.8, ENST00000358392.6, ENST00000370096.9, ENST00000427239.5, ENST00000447608.1, ENST00000461720.6, ENST00000465209.1, ENST00000470170.1, ENST00000512756.5, ENST00000635193.1, ENST00000639098.1, ENST00000644186.1, ENST00000645458.1, ENST00000647280.1

Found 1303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGGACCAGGGATGCCCCGAAGACCTTCTGGACCAGGCTTTCCTaGAGGTCCCTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACC +
Preference number: 1 (lower is better)
Translates to: HRTRDAPKTFWTRLS*RSLRTDWAGFSRRT
Trigger: GGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAAGCCTGGTCCAGAAGGTCTTCGGGGCATCCCTGGTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CCA 90 bp GAGACCTTGTTCTCCCACAGGACCAGGGATGCCCCGAAGACCTTCTaGACCAGGCTTTCCTGCAGGTCCCTGAGGACCGACTGGGCCGGT +
Preference number: 1 (lower is better)
Translates to: ETLFSHRTRDAPKTF*TRLSCRSLRTDWAG
Trigger: ACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAAGCCTGGTCCAGAAGGTCTTCGGGGCATCCCTGGTCCTGTGGGAGAACAAGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CCA 90 bp AAGACCTTCTGGACCAGGCTTTCCTGCAGGTCCCTGAGGACCGACTaGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCCTT +
Preference number: 1 (lower is better)
Translates to: KTFWTRLSCRSLRTD*AGFSRRTFCTCFPL
Trigger: AAGGGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAAGCCTGGTCCAGAAGGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR GCA 90 bp AGCTGGCCCTGGGAGACCAACAGGACCTTGAACTCCATCTCTCCCTaGAGGCCCTTGGGGACCTTTTTCTCCAGGAGCACCTTTCTCTCC +
Preference number: 1 (lower is better)
Translates to: SWPWETNRTLNSISP*RPLGTFFSRSTFLS
Trigger: GGAGAGAAAGGTGCTCCTGGAGAAAAAGGTCCCCAAGGGCCTGCAGGGAGAGATGGAGTTCAAGGTCCTGTTGGTCTCCCAGGGCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CCA 90 bp TGGGAAGTCAGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTaGATTGGTCTGAGTACCCATTGGAAATTTCATATGCTCAATGTC +
Preference number: 1 (lower is better)
Translates to: WEVRMAELQVFTSSG*IGLSTHWKFHMLNV
Trigger: GACATTGAGCATATGAAATTTCCAATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCTGACTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR TCA 90 bp GGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTaGGTACCCATTGGAAATTTCATATGCTCAATGTCTTGTTTCAGG +
Preference number: 1 (lower is better)
Translates to: GWLSCRSLQVRAGLV*VPIGNFICSMSCFR
Trigger: CCTGAAACAAGACATTGAGCATATGAAATTTCCAATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CCA 90 bp TTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCCATTaGAAATTTCATATGCTCAATGTCTTGTTTCAGGGAATTGAGGGA +
Preference number: 1 (lower is better)
Translates to: LQVFTSSGWIGLSTH*KFHMLNVLFQGIEG
Trigger: TCCCTCAATTCCCTGAAACAAGACATTGAGCATATGAAATTTCCAATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CCA 90 bp TTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATaGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCA +
Preference number: 1 (lower is better)
Translates to: LPCDSAPTKASVFPK*YLYMQRCFLYHPYS
Trigger: TGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR GCA 90 bp AAATTTTGCCGAGCAGAGGCAGTCAGAAGTTTCAGGAATGTCATTTaGACCATATTGATGGAATTTCCTTCAACATCTAAGTATGAAAGC +
Preference number: 1 (lower is better)
Translates to: KFCRAEAVRSFRNVI*TILMEFPSTSKYES
Trigger: GCTTTCATACTTAGATGTTGAAGGAAATTCCATCAATATGGTGCAAATGACATTCCTGAAACTTCTGACTGCCTCTGCTCGGCAAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR TCA 90 bp TACCCATTGGAAATTTCATATGCTCAATGTCTTGTTTCAGGGAATTaGGGGAACCAAATATTTCTTCCATTCCATCCGAGTAATCAAGAA +
Preference number: 1 (lower is better)
Translates to: YPLEISYAQCLVSGN*GNQIFLPFHPSNQE
Trigger: TTCTTGATTACTCGGATGGAATGGAAGAAATATTTGGTTCCCTCAATTCCCTGAAACAAGACATTGAGCATATGAAATTTCCAATGGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCGCACCAACTGGTCCTTaGAGACCTGGGGGACCGGGA +
Preference number: 2 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPAPTGP*RPGGPG
Trigger: TCCCGGTCCCCCAGGTCTTCAAGGACCAGTTGGTGC...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCGCTCCATTGGGACCTTaGGGGCCTCTTGGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTAPLGP*GPLGPG
Trigger: TCCAGGCCCAAGAGGCCCTCAAGGTCCCAATGGAGC...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp CAGGAGGACCCGGTTGACCAGGATCTCCATCTTCACCCTTGTCACCACCAACACCCTTGTCACCCTTGCTaGCTTTTTGTCCCGGCTCAC +
Preference number: 2 (lower is better)
Translates to: QEDPVDQDLHLHPCHHQHPCHPC*LFVPAH
Trigger: GTGAGCCGGGACAAAAAGGCAGCAAGGGTGACAAGG...GTGTTGGTGGTGACAAGGGTGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGCCAACTGGACCTGGTaGGCCCTGGGGACCTTCCCC +
Preference number: 2 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQANWTW*ALGTFP
Trigger: GGGGAAGGTCCCCAGGGCCCACCAGGTCCAGTTGGC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCATCCAGGGGCACCAACTaGTCCTTGAAGACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSSRGTN*SLKTWG
Trigger: CCCCCAGGTCTTCAAGGACCAGTTGGTGCCCCTGGA...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCATGCACCTTCTTTTCCTaGAGCACCAGGAAGACCTTG +
Preference number: 2 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSCTFFS*STRKTL
Trigger: CAAGGTCTTCCTGGTGCTGCAGGAAAAGAAGGTGCA...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCGCATGTGGCACAAAATaGGTTGGTGGCACCAAGGTA +
Preference number: 2 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTACGTK*VGGTKV
Trigger: TACCTTGGTGCCACCAACCCATTTTGTGCCACATGC...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCAACCGGTTGGTCCCTGTaGTCCAACCACTCCCCCTGG +
Preference number: 2 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSTGWSL*SNHSPW
Trigger: CCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGT...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAGGGCCATCATCACCTaGTGGCCCCTTGGCACCTGG +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFRAIIT*WPLGTW
Trigger: CCAGGTGCCAAGGGGCCACCAGGTGATGATGGCCCT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CAGGAGGACCCGGTTGACCAGGATCTCCATCTTCACCCTTGTCACCACCAACACCACAAAATGGGTTGGTaGCACCAAGGTATATTTTCT +
Preference number: 2 (lower is better)
Translates to: QEDPVDQDLHLHPCHHQHHKMGW*HQGIFS
Trigger: AGAAAATATACCTTGGTGCCACCAACCCATTTTGTG...GTGTTGGTGGTGACAAGGGTGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTGGTCCTTGAAGACCTaGGGGACCGGGAGGGCCATT +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFWSLKT*GTGRAI
Trigger: AATGGCCCTCCCGGTCCCCCAGGTCTTCAAGGACCA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATCCAACACCACCAACTaGACCAACAGACCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSNTTN*TNRPWG
Trigger: CCCCCAGGGTCTGTTGGTTCAGTTGGTGGTGTTGGA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAGGCCCTGGGTTCCCTaGTTCTCCAGGTTCACCCTT +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITRPWVP*FSRFTL
Trigger: AAGGGTGAACCTGGAGAAGCAGGGAACCCAGGGCCT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATCCAACCACTCCCCCTaGCCCAGGAGGGCCGGTCTT +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVASNHSP*PRRAGL
Trigger: AAGACCGGCCCTCCTGGGCCAGGGGGAGTGGTTGGA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATGGCCCCTTGGCACCTaGAGGTCCAGCAGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVAWPLGT*RSSSSR
Trigger: CCTGGAGCTGCTGGACCTCCAGGTGCCAAGGGGCCA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTGCCCAAACATCCCCTaGTGTCCTCTAGGACCTGGT +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFCPNIP*CPLGPG
Trigger: ACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGCATGTGGCACAAAATaGGTTGGTGGCACCAAGGTA +
Preference number: 2 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQACGTK*VGGTKV
Trigger: TACCTTGGTGCCACCAACCCATTTTGTGCCACATGC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCAGGAGAGTTGAGAATTaGGAATCAAGAATCAGCCCT +
Preference number: 2 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTRRVEN*ESRISP
Trigger: AGGGCTGATTCTTGATTCCCAATTCTCAACTCTCCT...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATCCAGGAGGGCCTTTTaGTCCAGGGAATCCAACTGG +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSRRAF*SRESNW
Trigger: CCAGTTGGATTCCCTGGACCAAAAGGCCCTCCTGGA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCAGACCAGGTGGCCCCATaGGACCAACATCCCCATTTT +
Preference number: 2 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSDQVAP*DQHPHF
Trigger: AAAATGGGGATGTTGGTCCCATGGGGCCACCTGGTC...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATTTCCTGCAGGTCCCTaGGGACCGACTGGGCCGGTT +
Preference number: 2 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKFPAGP*GPTGPV
Trigger: AACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCACTCCTCTTTCTCCTTTaGGACCGCCTACACCTGCTT +
Preference number: 2 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSLLFLL*DRLHLL
Trigger: AAGCAGGTGTAGGCGGTCCCAAAGGAGAAAGAGGAG...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAAAGCTTTTGCCATGTaGTTCTGCCCCCACAAAGGC +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITKAFAM*FCPHKG
Trigger: GCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTTT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAAAGCTTTTGCCATGTaGTTCTGCCCCCACAAAGGC +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFKAFAM*FCPHKG
Trigger: GCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTTT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR GCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCAACCTGGATCACCCTTTaGACCTTCTTTTCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSTWITL*TFFSCS
Trigger: GCTGCAGGAAAAGAAGGTGCAAAGGGTGATCCAGGT...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCTCCCTTGTCACCCTTaGTGCCTTTTTGTCCCGGCT +
Preference number: 2 (lower is better)
Translates to: AILIKLESDGIQGHVQVLLPCHP*CLFVPA
Trigger: AGCCGGGACAAAAAGGCAGCAAGGGTGACAAGGGAG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCACAGGACCAGGGATaGCCCGAAGACCTTCTGGAC +
Preference number: 2 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPQDQG*PEDLLD
Trigger: GTCCAGAAGGTCTTCGGGGCATCCCTGGTCCTGTGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACTCCAGGGAATCCAACTaGACCCTGAGGTCCTTGAGG +
Preference number: 2 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYSRESN*TLRSLR
Trigger: CCTCAAGGACCTCAGGGTCCAGTTGGATTCCCTGGA...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGATACCTTGAGGACCTaGATCACCCTTTGCACCTTC +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFDTLRT*ITLCTF
Trigger: GAAGGTGCAAAGGGTGATCCAGGTCCTCAAGGTATC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTTCACCAGGTGGGCCTaGCAGACCCTGAAGACCTAT +
Preference number: 2 (lower is better)
Translates to: AILIKLESDGIQGHVQVLFTRWA*QTLKTY
Trigger: ATAGGTCTTCAGGGTCTGCCAGGCCCACCTGGTGAA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCAATCCCCTTTTGCTCCTaGAGATCCTTGAGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSIPFCS*RSLSSR
Trigger: CCTGGAACTCAAGGATCTCCAGGAGCAAAAGGGGAT...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCAGATTTTTGCCCTCTaGGAATTTTGTTGGCGACAT +
Preference number: 2 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQQIFAL*EFCWRH
Trigger: ATGTCGCCAACAAAATTCTCAGAGGGCAAAAATCTG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCAGGAGGACCCGGTTaGCCAGGATCTCCATCTTCA +
Preference number: 2 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPGGPG*PGSPSS
Trigger: TGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTCAGGAGGGCCGGTCTTaGCTTGAAATCCAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPQEGRS*LEIQSP
Trigger: GGGAGACTGGATTTCAAGGCAAGACCGGCCCTCCTG...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATCCTTTCAGTCCAGGTaGACCCTGAGCTCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVASFQSR*TLSSRK
Trigger: CTTCCTGGAGCTCAGGGTGCACCTGGACTGAAAGGA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTTCAAAACTTGCATGTaGCACAAAATGGGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWFKTCM*HKMGWW
Trigger: CCACCAACCCATTTTGTGCCACATGCAAGTTTTGAA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGTCCATCAGCTCCATTaGGACCTTGAGGGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVAVHQLH*DLEGLL
Trigger: CAAGAGGCCCTCAAGGTCCCAATGGAGCTGATGGAC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTCCACTGTCACCTTTCTaGCCAGCGGGTCCAGTAGAG +
Preference number: 2 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPPLSPF*PAGPVE
Trigger: CTCTACTGGACCCGCTGGCCAGAAAGGTGACAGTGG...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATTACCCTTTGGGCCTTaGGGACCTGGTAAACCTGGA +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVALPFGP*GPGKPG
Trigger: TCCAGGTTTACCAGGTCCTCAAGGCCCAAAGGGTAA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCACAAAATGGGTTGGTaGCACCAAGGTATATTTTCT +
Preference number: 2 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWHKMGW*HQGIFS
Trigger: AGAAAATATACCTTGGTGCCACCAACCCATTTTGTG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCACAAAATGGGTTGGTaGCACCAAGGTATATTTTCT +
Preference number: 2 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVHKMGW*HQGIFS
Trigger: AGAAAATATACCTTGGTGCCACCAACCCATTTTGTG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGCATGTGGCACAAAATaGGTTGGTGGCACCAAGGTA +
Preference number: 2 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYACGTK*VGGTKV
Trigger: TACCTTGGTGCCACCAACCCATTTTGTGCCACATGC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTCGGTATTTCCTAAATaGTACCTGTATATGCAGCGT +
Preference number: 2 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQSVFPK*YLYMQR
Trigger: ACGCTGCATATACAGGTACCATTTAGGAAATACCGA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTTAGTACATCCTGGATaGATGAGAATGAGCACCATA +
Preference number: 2 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQLVHPG*MRMSTI
Trigger: TATGGTGCTCATTCTCATCCATCCAGGATGTACTAA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCTGTTTTAGTACATCCTaGATGGATGAGAATGAGCAC +
Preference number: 2 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVCFSTS*MDENEH
Trigger: GTGCTCATTCTCATCCATCCAGGATGTACTAAAACA...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGACACGTGCAAGTTTTaGAAATGGACACAGATAACA +
Preference number: 2 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVDTCKF*KWTQIT
Trigger: TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAAAATTAGAGTCAGATaGAATTCAGGGACACGTGCA +
Preference number: 2 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQKIRVR*NSGTRA
Trigger: TGCACGTGTCCCTGAATTCCATCTGACTCTAATTTT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAGACCCAGGAGGCCCTaGAAGACCACTGTCACCTTT +
Preference number: 2 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKRPRRP*KTTVTF
Trigger: AAAGGTGACAGTGGTCTTCCAGGGCCTCCTGGGTCT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGGAAGTCAGGATGGCTaGGTTGCAGGTCTTTACAAG +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVAGSQDG*VAGLYK
Trigger: CTTGTAAAGACCTGCAACTCAGCCATCCTGACTTCC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAATCATACCAGGCTGCTaGCTGATGACAGTGGTAGGT +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVAIIPGC*LMTVVG
Trigger: ACCTACCACTGTCATCAGTCAGCAGCCTGGTATGAT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAGTCTTCCAGATTTTTaGCCTCTGAGAATTTTGTTG +
Preference number: 2 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQSLPDF*PLRILL
Trigger: CAACAAAATTCTCAGAGGGCAAAAATCTGGAAGACT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGCATGTGGCACAAAATaGGTTGGTGGCACCAAGGTA +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVAACGTK*VGGTKV
Trigger: TACCTTGGTGCCACCAACCCATTTTGTGCCACATGC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATTCCCCTTGTTCTCCTaGAGGACCAATCAGGCCAAT +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVAFPLFS*RTNQAN
Trigger: ATTGGCCTGATTGGTCCTCCAGGAGAACAAGGGGAA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGAAGTTCGGGCTGGATTaGTCTGAGTACCCATTGGAA +
Preference number: 2 (lower is better)
Translates to: AILIKLESDGIQGHVQVLKFGLD*SEYPLE
Trigger: TTCCAATGGGTACTCAGACCAATCCAGCCCGAACTT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCCACAAAATGGGTTGGTaGCACCAAGGTATATTTTCT +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFHKMGW*HQGIFS
Trigger: AGAAAATATACCTTGGTGCCACCAACCCATTTTGTG...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATTAGTACATCCTGGATaGATGAGAATGAGCACCATA +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITLVHPG*MRMSTI
Trigger: TATGGTGCTCATTCTCATCCATCCAGGATGTACTAA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTTAGTACATCCTGGATaGATGAGAATGAGCACCATA +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFLVHPG*MRMSTI
Trigger: TATGGTGCTCATTCTCATCCATCCAGGATGTACTAA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATGTTTTAGTACATCCTaGATGGATGAGAATGAGCAC +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITCFSTS*MDENEH
Trigger: GTGCTCATTCTCATCCATCCAGGATGTACTAAAACA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTGTTTTAGTACATCCTaGATGGATGAGAATGAGCAC +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFCFSTS*MDENEH
Trigger: GTGCTCATTCTCATCCATCCAGGATGTACTAAAACA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGACACGTGCAAGTTTTaGAAATGGACACAGATAACA +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITDTCKF*KWTQIT
Trigger: TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAAAATTAGAGTCAGATaGAATTCAGGGACACGTGCA +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITKIRVR*NSGTRA
Trigger: TGCACGTGTCCCTGAATTCCATCTGACTCTAATTTT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAAAATTAGAGTCAGATaGAATTCAGGGACACGTGCA +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFKIRVR*NSGTRA
Trigger: TGCACGTGTCCCTGAATTCCATCTGACTCTAATTTT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGCAAGGAATCTCACAGTaGAGATCAGGGAAAAAGACA +
Preference number: 2 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMQGISQ*RSGKKT
Trigger: TGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTG...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
3UTR-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAATGGTACCTGTATATaGAGCGTTGTTTTCTATACC +
Preference number: 2 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITNGTCI*SVVFYT
Trigger: GGTATAGAAAACAACGCTGCATATACAGGTACCATT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR GCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAGTCTTCCAGATTTTTaGCCTCTGAGAATTTTGTTG +
Preference number: 2 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFSLPDF*PLRILL
Trigger: CAACAAAATTCTCAGAGGGCAAAAATCTGGAAGACT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACTGGCACAAAATGGGTTaGTGGCACCAAGGTATATTT +
Preference number: 2 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYWHKMG*WHQGIF
Trigger: AAATATACCTTGGTGCCACCAACCCATTTTGTGCCA...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTTCAAAACTTGCATGTaGCACAAAATGGGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: AILIKLESDGIQGHVQVLFKTCM*HKMGWW
Trigger: CCACCAACCCATTTTGTGCCACATGCAAGTTTTGAA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTTCAAAACTTGCATGTaGCACAAAATGGGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIFKTCM*HKMGWW
Trigger: CCACCAACCCATTTTGTGCCACATGCAAGTTTTGAA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGAGGAGAGTTGAGAATTaGGAATCAAGAATCAGCCCT +
Preference number: 2 (lower is better)
Translates to: AILIKLESDGIQGHVQVLRRVEN*ESRISP
Trigger: AGGGCTGATTCTTGATTCCCAATTCTCAACTCTCCT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTCCAATATTCACCATCTaGGAAGTCAGGATGGCTGAG +
Preference number: 2 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPPIFTI*EVRMAE
Trigger: CTCAGCCATCCTGACTTCCCAGATGGTGAATATTGG...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CAA 90 bp TGGATTGGTCTGAGTACCCATTGGAAATTTCATATGCTCAATGTCTaGTTTCAGGGAATTGAGGGAACCAAATATTTCTTCCATTCCATC +
Preference number: 2 (lower is better)
Translates to: WIGLSTHWKFHMLNV*FQGIEGTKYFFHSI
Trigger: GATGGAATGGAAGAAATATTTGGTTCCCTCAATTCCCTGAAACAAGACATTGAGCATATGAAATTTCCAATGGGTACTCAGACCAATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAAGGAGAGTTGAGAATTaGGAATCAAGAATCAGCCCT +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVARRVEN*ESRISP
Trigger: AGGGCTGATTCTTGATTCCCAATTCTCAACTCTCCT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR TCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGATTAACCTGCATTATTaGAGCACACTGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: AILIKLESDGIQGHVQVLINLHY*STLKTR
Trigger: CCTTGTTTTCAGTGTGCTTCAATAATGCAGGTTAAT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGAATGGTACCTGTATATaGAGCGTTGTTTTCTATACC +
Preference number: 2 (lower is better)
Translates to: AILIKLESDGIQGHVQVLNGTCI*SVVFYT
Trigger: GGTATAGAAAACAACGCTGCATATACAGGTACCATT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGAATTCAGGGACACGTaGAAGTTTTGGAAATGGACA +
Preference number: 2 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKEFRDT*KFWKWT
Trigger: TGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAATTAACCTGCATTATTaGAGCACACTGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: CICSVVFYTILIQNLHVAINLHY*STLKTR
Trigger: CCTTGTTTTCAGTGTGCTTCAATAATGCAGGTTAAT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGATACATATGATTGTTTaGTTGACGGAGGCATTGATT +
Preference number: 2 (lower is better)
Translates to: AILIKLESDGIQGHVQVLIHMIV*LTEALI
Trigger: AATCAATGCCTCCGTCAAGCAAACAATCATATGTAT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATGTTTTAGTACATCCTaGATGGATGAGAATGAGCAC +
Preference number: 2 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKCFSTS*MDENEH
Trigger: GTGCTCATTCTCATCCATCCAGGATGTACTAAAACA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACAGGTAGCCAAGACTTaGGTTTATTTATTGGATTCA +
Preference number: 2 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKQVAKT*VYLLDS
Trigger: TGAATCCAATAAATAAACTCAAGTCTTGGCTACCTG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353414.8
ENST00000358392.6
3UTR-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAATGGTACCTGTATATaGAGCGTTGTTTTCTATACC +
Preference number: 2 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKNGTCI*SVVFYT
Trigger: GGTATAGAAAACAACGCTGCATATACAGGTACCATT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR GCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTAATGGTACCTGTATATaGAGCGTTGTTTTCTATACC +
Preference number: 2 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPNGTCI*SVVFYT
Trigger: GGTATAGAAAACAACGCTGCATATACAGGTACCATT...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CCA 72 bp TGGACCAGGCTTTCCTGCAGGTCCCTGAGGACCGACTaGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: WTRLSCRSLRTD*AGFSRRTFCTC
Trigger: GCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAAGCCTGGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CAGGAGGACCCGGTTGACCAGGATCTCCATCTTCACCCTTGTCACCACCAACACAGCTCCATTGGGACCTaGAGGGCCTCTTGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: QEDPVDQDLHLHPCHHQHSSIGT*RASWAW
Trigger: CCAGGCCCAAGAGGCCCTCAAGGTCCCAATGGAGCT...GTGTTGGTGGTGACAAGGGTGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCTCCAGTCTCCCCACGTaGCCCAGGGTGTCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTSSLPT*PRVSWQ
Trigger: CTGCCAGGACACCCTGGGCAACGTGGGGAGACTGGA...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCTCACCTGGTGGCCCCTaGGCACCTGGAGGTCCAGCA +
Preference number: 3 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTSPGGP*APGGPA
Trigger: TGCTGGACCTCCAGGTGCCAAGGGGCCACCAGGTGA...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCAAGGGCCGGTCTTGCCTaGAAATCCAGTCTCCCCACG +
Preference number: 3 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSRAGLA*KSSLPT
Trigger: CGTGGGGAGACTGGATTTCAAGGCAAGACCGGCCCT...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp GGCCAGGATGCCCACGTTCCCCTATTGGACCAGTCTCACCGGTTGGTCCCTGTGCCTGTATATGCAGCGTaGTTTTCTATACCATCCTTA +
Preference number: 3 (lower is better)
Translates to: GQDAHVPLLDQSHRLVPVPVYAA*FSIPSL
Trigger: TAAGGATGGTATAGAAAACAACGCTGCATATACAGG...CACAGGGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGGCACCAACTGGTCCTaGAAGACCTGGGGGACCGGG +
Preference number: 3 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFGTNWS*KTWGTG
Trigger: CCCGGTCCCCCAGGTCTTCAAGGACCAGTTGGTGCC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCGTGGCACAAAATGGGTaGGTGGCACCAAGGTATATT +
Preference number: 3 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTVAQNG*VAPRYI
Trigger: AATATACCTTGGTGCCACCAACCCATTTTGTGCCAC...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGGACACGTGCAAGTTTaGGAAATGGACACAGATAAC +
Preference number: 3 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVGHVQV*EMDTDN
Trigger: GTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CAA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTGACCAGTCTCACCGGTaGGTCCCTGTGGTCCAACCA +
Preference number: 3 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPDQSHR*VPVVQP
Trigger: TGGTTGGACCACAGGGACCAACCGGTGAGACTGGTC...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGCCCACGTTCCCCTATaGGACCAGTCTCACCGGTTG +
Preference number: 3 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKAHVPL*DQSHRL
Trigger: CAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCATCTCCATCTTCACCCTaGTCACCACCAACACCATCT +
Preference number: 3 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSSPSSP*SPPTPS
Trigger: AGATGGTGTTGGTGGTGACAAGGGTGAAGATGGAGA...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAGCTCCAGGGAGACCTaGTTCTCCCACAGGACCAGG +
Preference number: 3 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKSSRET*FSHRTR
Trigger: CCTGGTCCTGTGGGAGAACAAGGTCTCCCTGGAGCT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CCA 72 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTaGATTGGTCTGAGTACCCATTGGAAATTTCATATG +
Preference number: 3 (lower is better)
Translates to: RMAELQVFTSSG*IGLSTHWKFHM
Trigger: CATATGAAATTTCCAATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGTGGCACAAAATGGGTaGGTGGCACCAAGGTATATT +
Preference number: 3 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITVAQNG*VAPRYI
Trigger: AATATACCTTGGTGCCACCAACCCATTTTGTGCCAC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CAA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTGACCCTGAAGACCTATaGGACCAGGAGGTCCAGGGA +
Preference number: 3 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPDPEDL*DQEVQG
Trigger: TCCCTGGACCTCCTGGTCCAATAGGTCTTCAGGGTC...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAACCACCAACACCATCTaGACCTGCAGGGCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKTTNTI*TCRARF
Trigger: GAACCTGGCCCTGCAGGTCAAGATGGTGTTGGTGGT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGGACACGTGCAAGTTTaGGAAATGGACACAGATAAC +
Preference number: 3 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFGHVQV*EMDTDN
Trigger: GTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CAA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGTCGGCAGAGAAGAGTaGATCAGAGTGTGCTTCCAA +
Preference number: 3 (lower is better)
Translates to: AILIKLESDGIQGHVQVLVGREE*IRVCFQ
Trigger: TTGGAAGCACACTCTGATCAACTCTTCTCTGCCGAC...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CAA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAACCCTCATCACCTTTTaGCCCAAACATCCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: CICSVVFYTILIQNLHVATLITF*PKHPLL
Trigger: CAGCAGGGGATGTTTGGGCAAAAAGGTGATGAGGGT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR TCA 72 bp AGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTaGGTACCCATTGGAAATTTCATATGCTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: SCRSLQVRAGLV*VPIGNFICSMS
Trigger: AGACATTGAGCATATGAAATTTCCAATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CCA 72 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATaGTACCTGTATATGCAGCGTTGTTTTCTATACCAT +
Preference number: 3 (lower is better)
Translates to: DSAPTKASVFPK*YLYMQRCFLYH
Trigger: ATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CAA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCGTGGCACAAAATGGGTaGGTGGCACCAAGGTATATT +
Preference number: 3 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIVAQNG*VAPRYI
Trigger: AATATACCTTGGTGCCACCAACCCATTTTGTGCCAC...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CAA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGTCATTTGCACCATATaGATGGAATTTCCTTCAACA +
Preference number: 3 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQVICTI*MEFPST
Trigger: TGTTGAAGGAAATTCCATCAATATGGTGCAAATGAC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGTCGGCAGAGAAGAGTaGATCAGAGTGTGCTTCCAA +
Preference number: 3 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKVGREE*IRVCFQ
Trigger: TTGGAAGCACACTCTGATCAACTCTTCTCTGCCGAC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
3UTR-3UTR CAA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGTGGCACAAAATGGGTaGGTGGCACCAAGGTATATT +
Preference number: 3 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKVAQNG*VAPRYI
Trigger: AATATACCTTGGTGCCACCAACCCATTTTGTGCCAC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CAA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGGACACGTGCAAGTTTaGGAAATGGACACAGATAAC +
Preference number: 3 (lower is better)
Translates to: CICSVVFYTILIQNLHVAGHVQV*EMDTDN
Trigger: GTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR GCA 72 bp TTCCATTCCATCCGAGTAATCAAGAATATTATCATCTaGATCTGCTTGCATGCCTTCAGTATGTCTTCTCGT +
Preference number: 3 (lower is better)
Translates to: FHSIRVIKNIII*ICLHAFSMSSR
Trigger: ACGAGAAGACATACTGAAGGCATGCAAGCAGATGCAGATGATAATATTCTTGATTACTCGGATGGAATGGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACATCCTTATTCAAAACTaGCATGTGGCACAAAATGGG +
Preference number: 3 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYILIQN*HVAQNG
Trigger: CCCATTTTGTGCCACATGCAAGTTTTGAATAAGGAT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CAA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCCAGGTAGCCAAGACTaGAGTTTATTTATTGGATTC +
Preference number: 3 (lower is better)
Translates to: AILIKLESDGIQGHVQVLPGSQD*SLFIGF
Trigger: GAATCCAATAAATAAACTCAAGTCTTGGCTACCTGG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353414.8
ENST00000358392.6
3UTR-3UTR CAA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACATATGCTCAATGTCTaGTTTCAGGGAATTGAGGGA +
Preference number: 3 (lower is better)
Translates to: CICSVVFYTILIQNLHVAHMLNV*FQGIEG
Trigger: TCCCTCAATTCCCTGAAACAAGACATTGAGCATATG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR-3UTR CAA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACCTGTATATGCAGCGTaGTTTTCTATACCATCCTTA +
Preference number: 3 (lower is better)
Translates to: CICSVVFYTILIQNLHVAPVYAA*FSIPSL
Trigger: TAAGGATGGTATAGAAAACAACGCTGCATATACAGG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR GCA 72 bp CAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATaGAGCGTTGTTTTCTATACCATCCTTATTCAAAAC +
Preference number: 3 (lower is better)
Translates to: QRHRYFLNGTCI*SVVFYTILIQN
Trigger: GTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR-3UTR CAA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCTGTATATGCAGCGTaGTTTTCTATACCATCCTTA +
Preference number: 3 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPVYAA*FSIPSL
Trigger: TAAGGATGGTATAGAAAACAACGCTGCATATACAGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR TCA 72 bp CAGTCAGAAGTTTCAGGAATGTCATTTGCACCATATTaGTGGAATTTCCTTCAACATCTAAGTATGAAAGCA +
Preference number: 3 (lower is better)
Translates to: QSEVSGMSFAPY*WNFLQHLSMKA
Trigger: TGCTTTCATACTTAGATGTTGAAGGAAATTCCATCAATATGGTGCAAATGACATTCCTGAAACTTCTGACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCTCACCGGTTGGTCCCTGTGGTCCAACCACTCCCCCTGGCCCAGGAGGGCCTCTTCCCTCTGCACCTaGAGCTCCAGGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: SLTGWSLWSNHSPWPRRASSLCT*SSRRTS
Trigger: CGAGGTCCTCCTGGAGCTGCAGGTGCAGAGGGAAGA...GGCCCTCCTGGGCCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGTGAGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCTCACCGGTTGGTCCCTGTGGTCCAACCACTCCCCCTGGCCCAGGAGGGCCCATCGCCACCTGAAGTaGCCTTTGGCCCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SLTGWSLWSNHSPWPRRAHRHLK*PLAQVS
Trigger: GGAAACCTGGGCCAAAGGGCACTTCAGGTGGCGATG...GGCCCTCCTGGGCCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGTGAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCTCACCGGTTGGTCCCTGTGGTCCAACCACTCCCCCTGGCCCAGGAGGGCCTCCTGGAGTTCCCCTTaGACCCAGCAAACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SLTGWSLWSNHSPWPRRASWSSP*TQQTSW
Trigger: CCACGAGGTTTGCTGGGTCCAAGGGGAACTCCAGGA...GGCCCTCCTGGGCCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGTGAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GGCCAGGATGCCCACGTTCCCCTATTGGACCAGTCTCACCGGTTGGTCCCTGTGCTGACCCCGAGGGCCTaGTTTGCCAGCTACTCCCCG +
Preference number: 4 (lower is better)
Translates to: GQDAHVPLLDQSHRLVPVLTPRA*FASYSP
Trigger: CGGGGAGTAGCTGGCAAACCAGGCCCTCGGGGTCAG...CACAGGGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCGCCAGCCTCACCAGATaGGCCAGGAGGACCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPASLTR*ARRTRL
Trigger: CAACCGGGTCCTCCTGGCCCATCTGGTGAGGCTGGC...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CAA 72 bp GAGGGCCAGGAGGGCCAGGATGCCCACGTTCCCCTATaGGACCAGTCTCACCGGTTGGTCCCTGTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: EGQEGQDAHVPL*DQSHRLVPVVQ
Trigger: TTGGACCACAGGGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGCCCTCCTGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCACCTGGGTCTCCAGTTaGGCCTGCTCGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPTWVSS*ACSTFG
Trigger: CCCAAAGGTCGAGCAGGCCCAACTGGAGACCCAGGT...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCACCTCTTGCACCTCTTaGACCTCGAGGACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPTSCTS*TSRTRW
Trigger: CCAACGGGTCCTCGAGGTTCAAGAGGTGCAAGAGGT...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp AGTCTCACCGGTTGGTCCCTGTGGTCCAACCACTCCCCCTGGCCCAGGAGGGCCGGAAGTCAGGATGGCTaGGTTGCAGGTCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: SLTGWSLWSNHSPWPRRAGSQDG*VAGLYK
Trigger: CTTGTAAAGACCTGCAACTCAGCCATCCTGACTTCC...GGCCCTCCTGGGCCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGTGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp AGTCTCACCGGTTGGTCCCTGTGGTCCAACCACTCCCCCTGGCCCAGGAGGGCCCATCTCCTCATCATTTaGTCCCAGGAAGCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SLTGWSLWSNHSPWPRRAHLLII*SQEAKC
Trigger: GCACTTCGCTTCCTGGGATCAAATGATGAGGAGATG...GGCCCTCCTGGGCCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGTGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp AGTCTCACCGGTTGGTCCCTGTGGTCCAACCACTCCCCCTGGCCCAGGAGGGCCAAAGCTTTTGCCATGTaGTTCTGCCCCCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLTGWSLWSNHSPWPRRAKAFAM*FCPHKG
Trigger: GCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTTT...GGCCCTCCTGGGCCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGTGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCAACTCCATCTCTCCCTaGAGGCCCTTGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPNSISP*RPLGTF
Trigger: AAAGGTCCCCAAGGGCCTGCAGGGAGAGATGGAGTT...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp GGCCAGGATGCCCACGTTCCCCTATTGGACCAGTCTCACCGGTTGGTCCCTGTGCCTTGTCACCCTTGCTaGCTTTTTGTCCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GQDAHVPLLDQSHRLVPVPCHPC*LFVPAH
Trigger: GTGAGCCGGGACAAAAAGGCAGCAAGGGTGACAAGG...CACAGGGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCAGGGCCCTGAGGACCTaGATCACCACTCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPRALRT*ITTLTF
Trigger: AAAGGTGAGAGTGGTGATCCAGGTCCTCAGGGCCCT...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCTTACCCTTTGGGCCTTaGGGACCTGGTAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPLPFGP*GPGKPG
Trigger: TCCAGGTTTACCAGGTCCTCAAGGCCCAAAGGGTAA...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCTCCTCTTCCTCCATCTaGACCTGGACGACCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPSSSSI*TWTTPF
Trigger: AAAAGGGGTCGTCCAGGTGCAGATGGAGGAAGAGGA...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GGCCAGGATGCCCACGTTCCCCTATTGGACCAGTCTCACCGGTTGGTCCCTGTGTGGGCCAGCTTCACCTaGAAGACCTCTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: GQDAHVPLLDQSHRLVPVWASFT*KTSWSN
Trigger: ATTGGACCAAGAGGTCTTCCAGGTGAAGCTGGCCCA...CACAGGGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GGCCAGGATGCCCACGTTCCCCTATTGGACCAGTCTCACCGGTTGGTCCCTGTGACCAATTGGACCTTGTaGACCAGGAAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GQDAHVPLLDQSHRLVPVTNWTL*TRKTLR
Trigger: CCTCAGGGTCTTCCTGGTCCACAAGGTCCAATTGGT...CACAGGGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GGCCAGGATGCCCACGTTCCCCTATTGGACCAGTCTCACCGGTTGGTCCCTGTGCTCCTCTTTCTCCTTTaGGACCGCCTACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: GQDAHVPLLDQSHRLVPVLLFLL*DRLHLL
Trigger: AAGCAGGTGTAGGCGGTCCCAAAGGAGAAAGAGGAG...CACAGGGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCCGGCCGCGACCCTCTaGTCCTTCCTCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQPAATL*SFLCRA
Trigger: GGCCCGGCAGAGGAAGGATCAGAGGGTCGCGGCCGG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AGTCTCACCGGTTGGTCCCTGTGGTCCAACCACTCCCCCTGGCCCAGGAGGGCCATCATCAACGATGTTTaGCTCCGTCTGTGCTATTGT +
Preference number: 4 (lower is better)
Translates to: SLTGWSLWSNHSPWPRRAIINDV*LRLCYC
Trigger: ACAATAGCACAGACGGAGGCAAACATCGTTGATGAT...GGCCCTCCTGGGCCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGTGAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GGCCAGGATGCCCACGTTCCCCTATTGGACCAGTCTCACCGGTTGGTCCCTGTGGATACCTTGAGGACCTaGATCACCCTTTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GQDAHVPLLDQSHRLVPVDTLRT*ITLCTF
Trigger: GAAGGTGCAAAGGGTGATCCAGGTCCTCAAGGTATC...CACAGGGACCAACCGGTGAGACTGGTCCAATAGGGGAACGTGGGCATCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCATGGCCCCTTGGCACCTaGAGGTCCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSWPLGT*RSSSSR
Trigger: CCTGGAGCTGCTGGACCTCCAGGTGCCAAGGGGCCA...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp CAGGAGGACCCGGTTGACCAGGATCTCCATCTTCACCCTTGTCACCACCAACACTTCTCCTGCTTGACCTaGAGGACCTGGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QEDPVDQDLHLHPCHHQHFSCLT*RTWVSS
Trigger: ACTGGAGACCCAGGTCCTTCAGGTCAAGCAGGAGAA...GTGTTGGTGGTGACAAGGGTGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp GAAGTCAGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGGCTCCATTGGGACCTTaGGGGCCTCTTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: EVRMAELQVFTSSGWIGLAPLGP*GPLGPG
Trigger: TCCAGGCCCAAGAGGCCCTCAAGGTCCCAATGGAGC...CAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCTGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp GAAGTCAGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGTTTCCTGCAGGTCCCTaGGGACCGACTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: EVRMAELQVFTSSGWIGLFPAGP*GPTGPV
Trigger: AACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAA...CAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCTGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCGGGGCCATCTACACCTaGCATACCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTGAIYT*HTRLPW
Trigger: CCAGGGCAGCCTGGTATGGCAGGTGTAGATGGCCCC...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCTCACCGGTTGGTCCCTGTGGTCCAACCACTCCCCCTGGCCCAGGAGGGCCTCTCCATATGCACCATaGCCATTTATGCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLTGWSLWSNHSPWPRRASPYAP*PFMLVS
Trigger: AGAAACAAGCATAAATGGCCATGGTGCATATGGAGA...GGCCCTCCTGGGCCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGTGAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCACCGGTTGGTCCCTGTaGTCCAACCACTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTTGWSL*SNHSPW
Trigger: CCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGT...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
3UTR CAA 72 bp GGATGTCCCTTTTCACCCTTGGAGCCAGGGTCACCTTaGAGACCAGGTAAGCCAGGAGGTCCCATAGGACCA +
Preference number: 4 (lower is better)
Translates to: GCPFSPLEPGSP*RPGKPGGPIGP
Trigger: TGGTCCTATGGGACCTCCTGGCTTACCTGGTCTCAAAGGTGACCCTGGCTCCAAGGGTGAAAAGGGACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCGGCCGCGACCCTCTaGTCCTTCCTCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPAATL*SFLCRA
Trigger: GGCCCGGCAGAGGAAGGATCAGAGGGTCGCGGCCGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCCCGTTGGACCACGCTaGCCCCGAGGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWPVGPR*PRGPGL
Trigger: CAAACCAGGCCCTCGGGGTCAGCGTGGTCCAACGGG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGCCAACTGGACCTGGTaGGCCCTGGGGACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVANWTW*ALGTFP
Trigger: GGGGAAGGTCCCCAGGGCCCACCAGGTCCAGTTGGC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCTCCCTGAGGACCGACTaGGCCGGTTTTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTSLRTD*AGFSRR
Trigger: CCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAGGGA...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp CTGAGGACCGACTGGGCCGGTTTTTCCAGGAGGACCTTCTGCACCTGCTTCCCCTCTCCTCAGTTACAGTaGGTCCCTCTGTTACACTTT +
Preference number: 4 (lower is better)
Translates to: LRTDWAGFSRRTFCTCFPSPQLQ*VPLLHF
Trigger: AAAGTGTAACAGAGGGACCCACTGTAACTGAGGAGA...GGGGAAGCAGGTGCAGAAGGTCCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCCCTCGTTCACCCCTGTaGCCTTTGTCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTPRSPL*PLSPGR
Trigger: TCTGCCAGGTGACAAAGGTCACAGGGGTGAACGAGG...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCACCTTCTTTCCCAGGATaGCCAGGAGGCCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSPSFPG*PGGPSA
Trigger: TGCTGATGGGCCTCCTGGTCATCCTGGGAAAGAAGG...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCTCCAACACCACCAACTaGACCAACAGACCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTSNTTN*TNRPWG
Trigger: CCCCCAGGGTCTGTTGGTTCAGTTGGTGGTGTTGGA...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCCCCTCGATCTCCCTTTaGCCCAGGTTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTPSISL*PRFSWH
Trigger: ATGCCAGGAGAACCTGGGGCAAAGGGAGATCGAGGG...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCCCGAGGGCCTGGTTTaGCAGCTACTCCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVPEGLV*QLLPVH
Trigger: GTGCACGGGGAGTAGCTGGCAAACCAGGCCCTCGGG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCCTCTCCCTCTGAGTTaGCCCCACCGGCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLPLPLS*PHRPGP
Trigger: GGGTCCCGGCCGGTGGGGCCAACTCAGAGGGAGAGG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCTCTCCCTCTGAGTTaGCCCCACCGGCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPLPLS*PHRPGP
Trigger: GGGTCCCGGCCGGTGGGGCCAACTCAGAGGGAGAGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCACACCACTCTCACCTTTaGCCCCAGATGAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSHHSHL*PQMNQA
Trigger: GGCCTGGTTCATCTGGGGCCAAAGGTGAGAGTGGTG...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTCCAACCACTCCCCCTaGCCCAGGAGGGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWSNHSP*PRRAGL
Trigger: AAGACCGGCCCTCCTGGGCCAGGGGGAGTGGTTGGA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCAACCAGTCTCACCGGTTaGTCCCTGTGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSTSLTG*SLWSNH
Trigger: GTGGTTGGACCACAGGGACCAACCGGTGAGACTGGT...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGGACCTGGTGGGCCCTaGGGACCTTCCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQGPGGP*GPSPPF
Trigger: GAAAGGAGGGGAAGGTCCCCAGGGCCCACCAGGTCC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGCCAGCCTCACCAGATaGGCCAGGAGGACCCGGTTG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVASLTR*ARRTRL
Trigger: CAACCGGGTCCTCCTGGCCCATCTGGTGAGGCTGGC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGCCAGCCTCACCAGATaGGCCAGGAGGACCCGGTTG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQASLTR*ARRTRL
Trigger: CAACCGGGTCCTCCTGGCCCATCTGGTGAGGCTGGC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GAAGTCAGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGTCCCATAGGACCAGGTaGTCCATCTTGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EVRMAELQVFTSSGWIGLSHRTR*SILACS
Trigger: GCTGCAGGCCAAGATGGACCACCTGGTCCTATGGGA...CAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGGAGGACCCGGTTGACCAGGATCTCCATCTTCACCCTTGTCACCACCAACACTTCCCCTTGTTCTCCTaGAGGACCAATCAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QEDPVDQDLHLHPCHHQHFPLFS*RTNQAN
Trigger: ATTGGCCTGATTGGTCCTCCAGGAGAACAAGGGGAA...GTGTTGGTGGTGACAAGGGTGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCGGCCGCGACCCTCTaGTCCTTCCTCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPAATL*SFLCRA
Trigger: GGCCCGGCAGAGGAAGGATCAGAGGGTCGCGGCCGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCTTTCCTCTCCCTCTaGGTTGGCCCCACCGGCCGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPFLSL*VGPTGR
Trigger: CCGGCCGGTGGGGCCAACTCAGAGGGAGAGGAAAGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCAGCAGCCTTGGGTGCTaGAGAGTCACAGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTSSLGC*RVTVWT
Trigger: AGTCCAGACTGTGACTCTTCAGCACCCAAGGCTGCT...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCCTGGATTCCCTTGTTaGCCTGGAGGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVPGFPC*PGGPGS
Trigger: GGAGCCTGGGCCTCCAGGTCAACAAGGGAATCCAGG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCCCACGTTCTCCTGGTaGGCCAACTGGACCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVPTFSW*ANWTWW
Trigger: CCACCAGGTCCAGTTGGCTCACCAGGAGAACGTGGG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGCTCCATTGGGACCTTaGGGGCCTCTTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQAPLGP*GPLGPG
Trigger: TCCAGGCCCAAGAGGCCCTCAAGGTCCCAATGGAGC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGGAGGACCCGGTTGACCAGGATCTCCATCTTCACCCTTGTCACCACCAACACTTTGTCCCAGAAACATaGCTAGGAGCTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: QEDPVDQDLHLHPCHHQHFVPET*LGASVW
Trigger: CCAGACAGAAGCTCCTAGGCATGTTTCTGGGACAAA...GTGTTGGTGGTGACAAGGGTGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCAAGGACCCATAATACCTaGAGGTCCTGCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSRTHNT*RSCWSW
Trigger: CCAGGACCAGCAGGACCTGCAGGTATTATGGGTCCT...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGGGGGCCATCTACACCTaGCATACCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWGAIYT*HTRLPW
Trigger: CCAGGGCAGCCTGGTATGGCAGGTGTAGATGGCCCC...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGGGACCGCCTACACCTaGTTCCCCAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITGTAYT*FPRRPW
Trigger: CCAGGGCCTCCTGGGGAAGCAGGTGTAGGCGGTCCC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCTCCTCCATCTGCACCTaGACGACCCCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTSSICT*TTPFSR
Trigger: CCTGGAAAAAGGGGTCGTCCAGGTGCAGATGGAGGA...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GAAGTCAGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGTCCAGGAGGGCCTTTTaGTCCAGGGAATCCAACTGG +
Preference number: 4 (lower is better)
Translates to: EVRMAELQVFTSSGWIGLSRRAF*SRESNW
Trigger: CCAGTTGGATTCCCTGGACCAAAAGGCCCTCCTGGA...CAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCTGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGACCGGTTGGTCCCTGTaGTCCAACCACTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQTGWSL*SNHSPW
Trigger: CCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCAACCTTTTTCACCAGGTaGGCCTGGCAGACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSTFFTR*AWQTLK
Trigger: CTTCAGGGTCTGCCAGGCCCACCTGGTGAAAAAGGT...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCAGACCAGGTGGCCCCATaGGACCAACATCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSDQVAP*DQHPHF
Trigger: AAAATGGGGATGTTGGTCCCATGGGGCCACCTGGTC...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAGGGCCATCATCACCTaGTGGCCCCTTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQRAIIT*WPLGTW
Trigger: CCAGGTGCCAAGGGGCCACCAGGTGATGATGGCCCT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACCGGCCGCGACCCTCTaGTCCTTCCTCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAPAATL*SFLCRA
Trigger: GGCCCGGCAGAGGAAGGATCAGAGGGTCGCGGCCGG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCCGAGGGCCTGGTTTaGCAGCTACTCCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPEGLV*QLLPVH
Trigger: GTGCACGGGGAGTAGCTGGCAAACCAGGCCCTCGGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCTCTCCCTCTGAGTTaGCCCCACCGGCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPLPLS*PHRPGP
Trigger: GGGTCCCGGCCGGTGGGGCCAACTCAGAGGGAGAGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR CCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCAGAGCTTGAGCAGCCTTaGGTGCTGAAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSELEQP*VLKSHS
Trigger: ACTGTGACTCTTCAGCACCCAAGGCTGCTCAAGCTC...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCTCCAGGTTTTCCCGTTaGACCAGGGGGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVSRFSR*TRGTLD
Trigger: GTCCAGGGTCCCCCTGGTCCAACGGGAAAACCTGGA...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGGGCCCAGGCTCCCCTTaGGGACCCATGTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWGPGSP*GPMFPF
Trigger: AAAAGGGAACATGGGTCCCCAAGGGGAGCCTGGGCC...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCTGACCCCGAGGGCCTaGTTTGCCAGCTACTCCCCG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLLTPRA*FASYSP
Trigger: CGGGGAGTAGCTGGCAAACCAGGCCCTCGGGGTCAG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCACCTCGAGGACCCGTTaGACCACGCTGACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFTSRTR*TTLTPR
Trigger: CCTCGGGGTCAGCGTGGTCCAACGGGTCCTCGAGGT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTCCAACCACTCCCCCTaGCCCAGGAGGGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLSNHSP*PRRAGL
Trigger: AAGACCGGCCCTCCTGGGCCAGGGGGAGTGGTTGGA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTGGTCCTTGAAGACCTaGGGGACCGGGAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWWSLKT*GTGRAI
Trigger: AATGGCCCTCCCGGTCCCCCAGGTCTTCAAGGACCA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp ATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATCCGGCCGCGACCCTCTaGTCCTTCCTCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ILLKESHSGDQGKRHVFNPAATL*SFLCRA
Trigger: GGCCCGGCAGAGGAAGGATCAGAGGGTCGCGGCCGG...ATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCTTTCCTCTCCCTCTaGGTTGGCCCCACCGGCCGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPFLSL*VGPTGR
Trigger: CCGGCCGGTGGGGCCAACTCAGAGGGAGAGGAAAGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCCTTTCCTCTCCCTCTaGGTTGGCCCCACCGGCCGG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYPFLSL*VGPTGR
Trigger: CCGGCCGGTGGGGCCAACTCAGAGGGAGAGGAAAGG...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGGACCTGGAGGACCTTaGGGACCTCGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITGPGGP*GPRSPL
Trigger: CAGGGGTGAACGAGGTCCTCAAGGTCCTCCAGGTCC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCTGGATTCCCTTGTTaGCCTGGAGGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPGFPC*PGGPGS
Trigger: GGAGCCTGGGCCTCCAGGTCAACAAGGGAATCCAGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGGACCAGGAAGACCCTaGGGTCCTGGATTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVGPGRP*GPGFPC
Trigger: ACAAGGGAATCCAGGACCTCAGGGTCTTCCTGGTCC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGGGACCAGGAAGACCCTaGGGTCCTGGATTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWGPGRP*GPGFPC
Trigger: ACAAGGGAATCCAGGACCTCAGGGTCTTCCTGGTCC...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCCTTCTTTCCCAGGATaGCCAGGAGGCCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQPSFPG*PGGPSA
Trigger: TGCTGATGGGCCTCCTGGTCATCCTGGGAAAGAAGG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCCGTTGGACCACGCTaGCCCCGAGGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPVGPR*PRGPGL
Trigger: CAAACCAGGCCCTCGGGGTCAGCGTGGTCCAACGGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGCACCAACTGGTCCTTaGAGACCTGGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFAPTGP*RPGGPG
Trigger: TCCCGGTCCCCCAGGTCTTCAAGGACCAGTTGGTGC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGCACCAACTGGTCCTTaGAGACCTGGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLAPTGP*RPGGPG
Trigger: TCCCGGTCCCCCAGGTCTTCAAGGACCAGTTGGTGC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGCTCCATTGGGACCTTaGGGGCCTCTTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFAPLGP*GPLGPG
Trigger: TCCAGGCCCAAGAGGCCCTCAAGGTCCCAATGGAGC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGCTCCATTGGGACCTTaGGGGCCTCTTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLAPLGP*GPLGPG
Trigger: TCCAGGCCCAAGAGGCCCTCAAGGTCCCAATGGAGC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTCCAACACCACCAACTaGACCAACAGACCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWSNTTN*TNRPWG
Trigger: CCCCCAGGGTCTGTTGGTTCAGTTGGTGGTGTTGGA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCTCCAACACCACCAACTaGACCAACAGACCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVSNTTN*TNRPWG
Trigger: CCCCCAGGGTCTGTTGGTTCAGTTGGTGGTGTTGGA...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCAGATGACAGTGGTAGGTaGAATTTTGCCGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSDDSGR*NFAEQR
Trigger: CCTCTGCTCGGCAAAATTTCACCTACCACTGTCATC...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCCCTCGATCTCCCTTTaGCCCAGGTTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVPSISL*PRFSWH
Trigger: ATGCCAGGAGAACCTGGGGCAAAGGGAGATCGAGGG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGGGGCCATCTACACCTaGCATACCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLGAIYT*HTRLPW
Trigger: CCAGGGCAGCCTGGTATGGCAGGTGTAGATGGCCCC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCACCTCTGACACCATCTaGTCCCTTTACTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVTSDTI*SLYSPG
Trigger: CCCCGGGGAGTAAAGGGAGCAGATGGTGTCAGAGGT...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGACCTCTGACACCATCTaGTCCCTTTACTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWTSDTI*SLYSPG
Trigger: CCCCGGGGAGTAAAGGGAGCAGATGGTGTCAGAGGT...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCATCGCCACCTGAAGTaGCCTTTGGCCCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWHRHLK*PLAQVS
Trigger: GGAAACCTGGGCCAAAGGGCACTTCAGGTGGCGATG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCAGGAGGGCCGGTCTTaGCTTGAAATCCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQQEGRS*LEIQSP
Trigger: GGGAGACTGGATTTCAAGGCAAGACCGGCCCTCCTG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCACCTGGATCACCCTTTaGACCTTCTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RMAELQVFTSSGWIGLSTTWITL*TFFSCS
Trigger: GCTGCAGGAAAAGAAGGTGCAAAGGGTGATCCAGGT...GGTACTCAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCAGGCCCTGGGTTCCCTaGTTCTCCAGGTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVRPWVP*FSRFTL
Trigger: AAGGGTGAACCTGGAGAAGCAGGGAACCCAGGGCCT...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGGGACCGCCTACACCTaGTTCCCCAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICGTAYT*FPRRPW
Trigger: CCAGGGCCTCCTGGGGAAGCAGGTGTAGGCGGTCCC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTGGTCCATCTTGGCCTaGAGCTCCAGGGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWWSILA*SSRETL
Trigger: CAAGGTCTCCCTGGAGCTGCAGGCCAAGATGGACCA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TCACCTTTTTGCCCAAACATCCCCTGCTGTCCTCTAGGACCTGGTTCACCATCACTGAGCAGAGATGGTTaGTCCTTTGGAACCATCACC +
Preference number: 4 (lower is better)
Translates to: SPFCPNIPCCPLGPGSPSLSRDG*SFGTIT
Trigger: GGTGATGGTTCCAAAGGACCAACCATCTCTGCTCAG...TGATGGTGAACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCAAAAAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTCCTGGAGTTCCCCTTaGACCCAGCAAACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWSWSSP*TQQTSW
Trigger: CCACGAGGTTTGCTGGGTCCAAGGGGAACTCCAGGA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGCCCAGGTTTCCCAGTaGGACCTCTTGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQAQVSQ*DLLHLL
Trigger: CAAGAGGTGCAAGAGGTCCCACTGGGAAACCTGGGC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAACCGGTTGGTCCCTGTaGTCCAACCACTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITTGWSL*SNHSPW
Trigger: CCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGACCAGTCTCACCGGTTaGTCCCTGTGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQTSLTG*SLWSNH
Trigger: GTGGTTGGACCACAGGGACCAACCGGTGAGACTGGT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGCCAACTGGACCTGGTaGGCCCTGGGGACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLANWTW*ALGTFP
Trigger: GGGGAAGGTCCCCAGGGCCCACCAGGTCCAGTTGGC...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCCAACTGGACCTGGTaGGCCCTGGGGACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICANWTW*ALGTFP
Trigger: GGGGAAGGTCCCCAGGGCCCACCAGGTCCAGTTGGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCGCCAACTGGACCTGGTaGGCCCTGGGGACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIANWTW*ALGTFP
Trigger: GGGGAAGGTCCCCAGGGCCCACCAGGTCCAGTTGGC...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGCCATCATCACCTGGTaGCCCCTTGGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITAIITW*PLGTWR
Trigger: CCTCCAGGTGCCAAGGGGCCACCAGGTGATGATGGC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATCCAGGAGGACCTGGTaGGCCAGCCTCACCAGATGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSRRTW*ASLTRW
Trigger: CCATCTGGTGAGGCTGGCCCACCAGGTCCTCCTGGA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTCCAGGAGGACCTGGTaGGCCAGCCTCACCAGATGG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLSRRTW*ASLTRW
Trigger: CCATCTGGTGAGGCTGGCCCACCAGGTCCTCCTGGA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GAAGTCAGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGATCCCCTTTTGCTCCTaGAGATCCTTGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EVRMAELQVFTSSGWIGLIPFCS*RSLSSR
Trigger: CCTGGAACTCAAGGATCTCCAGGAGCAAAAGGGGAT...CAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTTCACCAGGTGGACCTaGAGACCCAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLFTRWT*RPRRPW
Trigger: CCAGGGCCTCCTGGGTCTCCAGGTCCACCTGGTGAA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCATTCACCAGGTGGACCTaGAGACCCAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSFTRWT*RPRRPW
Trigger: CCAGGGCCTCCTGGGTCTCCAGGTCCACCTGGTGAA...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp ACTATATTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGACCTTTCCTCTCCCTCTaGGTTGGCCCCACCGGCCGG +
Preference number: 4 (lower is better)
Translates to: TIFPCRLQINSLCAELSRPFLSL*VGPTGR
Trigger: CCGGCCGGTGGGGCCAACTCAGAGGGAGAGGAAAGG...TCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAATATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR TCA 90 bp CTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGGACCTGGAGGACCTTaGGGACCTCGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LQGTKYYSRNLTVEIREKGPGGP*GPRSPL
Trigger: CAGGGGTGAACGAGGTCCTCAAGGTCCTCCAGGTCC...TTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTTCTCCTGCTTGACCTaGAGGACCTGGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWFSCLT*RTWVSS
Trigger: ACTGGAGACCCAGGTCCTTCAGGTCAAGCAGGAGAA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACCCGTTGGACCACGCTaGCCCCGAGGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAPVGPR*PRGPGL
Trigger: CAAACCAGGCCCTCGGGGTCAGCGTGGTCCAACGGG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGAGGGCCATCGCCACCTaGAGTGCCCTTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLRAIAT*SALWPR
Trigger: CCTGGGCCAAAGGGCACTTCAGGTGGCGATGGCCCT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGGGCCATCGCCACCTaGAGTGCCCTTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRAIAT*SALWPR
Trigger: CCTGGGCCAAAGGGCACTTCAGGTGGCGATGGCCCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAGGACCCATAATACCTaGAGGTCCTGCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQRTHNT*RSCWSW
Trigger: CCAGGACCAGCAGGACCTGCAGGTATTATGGGTCCT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp ACTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAGGGGCCATCTACACCTaGCATACCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TTGDKILLKESHSGDQGKGAIYT*HTRLPW
Trigger: CCAGGGCAGCCTGGTATGGCAGGTGTAGATGGCCCC...TTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCCGAGGGCCTGGTTTaGCAGCTACTCCCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPEGLV*QLLPVH
Trigger: GTGCACGGGGAGTAGCTGGCAAACCAGGCCCTCGGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCCAGGAGGGCCAGGATaGCCACGTTCCCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLPGGPG*PRSPIG
Trigger: TCCAATAGGGGAACGTGGGCATCCTGGCCCTCCTGG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTCCTTTCAGTCCAGGTaGACCCTGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQSFQSR*TLSSRK
Trigger: CTTCCTGGAGCTCAGGGTGCACCTGGACTGAAAGGA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTCCTTTCAGTCCAGGTaGACCCTGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWSFQSR*TLSSRK
Trigger: CTTCCTGGAGCTCAGGGTGCACCTGGACTGAAAGGA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCAACTCCATCTCTCCCTaGAGGCCCTTGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVNSISP*RPLGTF
Trigger: AAAGGTCCCCAAGGGCCTGCAGGGAGAGATGGAGTT...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGGGACCGCCTACACCTaGTTCCCCAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAGTAYT*FPRRPW
Trigger: CCAGGGCCTCCTGGGGAAGCAGGTGTAGGCGGTCCC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCCCACAGGACCAGGGATaGCCCGAAGACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFPQDQG*PEDLLD
Trigger: GTCCAGAAGGTCTTCGGGGCATCCCTGGTCCTGTGG...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGATCCTCTCCCTCTGAGTTaGCCCCACCGGCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: SRNLTVEIREKDMCLIIDPLPLS*PHRPGP
Trigger: GGGTCCCGGCCGGTGGGGCCAACTCAGAGGGAGAGG...ATCTATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTCCTGCTGGTCCTGGTaGTCCTTCGACAAGCATACC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQSCWSW*SFDKHT
Trigger: GGTATGCTTGTCGAAGGACCACCAGGACCAGCAGGA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCACCTGCAGGTCCTGCTaGTCCTGGTGGTCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFTCRSC*SWWSFD
Trigger: GTCGAAGGACCACCAGGACCAGCAGGACCTGCAGGT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCACCCATTGGGCCAGGTaGGCCTCTCAGAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFTHWAR*ASQSNP
Trigger: CGGATTGCTCTGAGAGGCCCACCTGGCCCAATGGGT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTCCAGGTTTTCCCGTTaGACCAGGGGGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLSRFSR*TRGTLD
Trigger: GTCCAGGGTCCCCCTGGTCCAACGGGAAAACCTGGA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTCCAGGTTTTCCCGTTaGACCAGGGGGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFSRFSR*TRGTLD
Trigger: GTCCAGGGTCCCCCTGGTCCAACGGGAAAACCTGGA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGTGACCTTTGTCACCTaGCAGACCCGGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVVTFVT*QTRKSI
Trigger: GATGGACTTCCGGGTCTGCCAGGTGACAAAGGTCAC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGGCCCAGGCTCCCCTTaGGGACCCATGTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFGPGSP*GPMFPF
Trigger: AAAAGGGAACATGGGTCCCCAAGGGGAGCCTGGGCC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGGCCCAGGCTCCCCTTaGGGACCCATGTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLGPGSP*GPMFPF
Trigger: AAAAGGGAACATGGGTCCCCAAGGGGAGCCTGGGCC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAACCTGGGTCTCCAGTTaGGCCTGCTCGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITTWVSS*ACSTFG
Trigger: CCCAAAGGTCGAGCAGGCCCAACTGGAGACCCAGGT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTGACCCCGAGGGCCTaGTTTGCCAGCTACTCCCCG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLTPRA*FASYSP
Trigger: CGGGGAGTAGCTGGCAAACCAGGCCCTCGGGGTCAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGACCTCGAGGACCCGTTaGACCACGCTGACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLTSRTR*TTLTPR
Trigger: CCTCGGGGTCAGCGTGGTCCAACGGGTCCTCGAGGT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCTCGAGGACCCGTTaGACCACGCTGACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTSRTR*TTLTPR
Trigger: CCTCGGGGTCAGCGTGGTCCAACGGGTCCTCGAGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTCCAGGGAATCCAACTaGACCCTGAGGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQSRESN*TLRSLR
Trigger: CCTCAAGGACCTCAGGGTCCAGTTGGATTCCCTGGA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAACCACTCCCCCTaGCCCAGGAGGGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSNHSP*PRRAGL
Trigger: AAGACCGGCCCTCCTGGGCCAGGGGGAGTGGTTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGGACCTGGTGGGCCCTaGGGACCTTCCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYGPGGP*GPSPPF
Trigger: GAAAGGAGGGGAAGGTCCCCAGGGCCCACCAGGTCC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGGACCTGGTGGGCCCTaGGGACCTTCCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICGPGGP*GPSPPF
Trigger: GAAAGGAGGGGAAGGTCCCCAGGGCCCACCAGGTCC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCGGACCTGGTGGGCCCTaGGGACCTTCCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIGPGGP*GPSPPF
Trigger: GAAAGGAGGGGAAGGTCCCCAGGGCCCACCAGGTCC...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCATGGTCCTTGAAGACCTaGGGGACCGGGAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSWSLKT*GTGRAI
Trigger: AATGGCCCTCCCGGTCCCCCAGGTCTTCAAGGACCA...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCTGTCCTCTAGGACCTaGTTCACCATCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWLSSRT*FTITSS
Trigger: GCTGGAGGTGATGGTGAACCAGGTCCTAGAGGACAG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTTCACCAGGTGGGCCTaGCAGACCCTGAAGACCTAT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQFTRWA*QTLKTY
Trigger: ATAGGTCTTCAGGGTCTGCCAGGCCCACCTGGTGAA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTTCACCAGGTGGGCCTaGCAGACCCTGAAGACCTAT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWFTRWA*QTLKTY
Trigger: ATAGGTCTTCAGGGTCTGCCAGGCCCACCTGGTGAA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGGACCAGGTGGCCCCATaGGACCAACATCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWDQVAP*DQHPHF
Trigger: AAAATGGGGATGTTGGTCCCATGGGGCCACCTGGTC...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGTCCATCAGCTCCATTaGGACCTTGAGGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVVHQLH*DLEGLL
Trigger: CAAGAGGCCCTCAAGGTCCCAATGGAGCTGATGGAC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGGTCCATCAGCTCCATTaGGACCTTGAGGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWVHQLH*DLEGLL
Trigger: CAAGAGGCCCTCAAGGTCCCAATGGAGCTGATGGAC...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACTGGCCCCTTGGCACCTaGAGGTCCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYWPLGT*RSSSSR
Trigger: CCTGGAGCTGCTGGACCTCCAGGTGCCAAGGGGCCA...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTGGCCCCTTGGCACCTaGAGGTCCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIWPLGT*RSSSSR
Trigger: CCTGGAGCTGCTGGACCTCCAGGTGCCAAGGGGCCA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTGGCCCCTTGGCACCTaGAGGTCCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICWPLGT*RSSSSR
Trigger: CCTGGAGCTGCTGGACCTCCAGGTGCCAAGGGGCCA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGCCAGCCTCACCAGATaGGCCAGGAGGACCCGGTTG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYASLTR*ARRTRL
Trigger: CAACCGGGTCCTCCTGGCCCATCTGGTGAGGCTGGC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCCAGCCTCACCAGATaGGCCAGGAGGACCCGGTTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICASLTR*ARRTRL
Trigger: CAACCGGGTCCTCCTGGCCCATCTGGTGAGGCTGGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGAATGACTTCACCAGGTaGACCTGGAGACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWNDFTR*TWRPRR
Trigger: CCTCCTGGGTCTCCAGGTCCACCTGGTGAAGTCATT...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGGAGGACCCGGTTGACCAGGATCTCCATCTTCACCCTTGTCACCACCAACACTCGGTATTTCCTAAATaGTACCTGTATATGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QEDPVDQDLHLHPCHHQHSVFPK*YLYMQR
Trigger: ACGCTGCATATACAGGTACCATTTAGGAAATACCGA...GTGTTGGTGGTGACAAGGGTGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTACCTTTCCTCTCCCTCTaGGTTGGCCCCACCGGCCGG +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLPFLSL*VGPTGR
Trigger: CCGGCCGGTGGGGCCAACTCAGAGGGAGAGGAAAGG...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCCTCGTTCACCCCTGTaGCCTTTGTCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLPRSPL*PLSPGR
Trigger: TCTGCCAGGTGACAAAGGTCACAGGGGTGAACGAGG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCGGACCTGGAGGACCTTaGGGACCTCGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIGPGGP*GPRSPL
Trigger: CAGGGGTGAACGAGGTCCTCAAGGTCCTCCAGGTCC...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGGACCTGGAGGACCTTaGGGACCTCGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICGPGGP*GPRSPL
Trigger: CAGGGGTGAACGAGGTCCTCAAGGTCCTCCAGGTCC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCCTGGATTCCCTTGTTaGCCTGGAGGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIPGFPC*PGGPGS
Trigger: GGAGCCTGGGCCTCCAGGTCAACAAGGGAATCCAGG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCTGGATTCCCTTGTTaGCCTGGAGGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPGFPC*PGGPGS
Trigger: GGAGCCTGGGCCTCCAGGTCAACAAGGGAATCCAGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGGACCAGGAAGACCCTaGGGTCCTGGATTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFGPGRP*GPGFPC
Trigger: ACAAGGGAATCCAGGACCTCAGGGTCTTCCTGGTCC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCTTCTTTCCCAGGATaGCCAGGAGGCCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPSFPG*PGGPSA
Trigger: TGCTGATGGGCCTCCTGGTCATCCTGGGAAAGAAGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCCGTTGGACCACGCTaGCCCCGAGGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPVGPR*PRGPGL
Trigger: CAAACCAGGCCCTCGGGGTCAGCGTGGTCCAACGGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCCACGTTCTCCTGGTaGGCCAACTGGACCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPTFSW*ANWTWW
Trigger: CCACCAGGTCCAGTTGGCTCACCAGGAGAACGTGGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCAGACCAACAGGACCTTaGACTCCATCTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVRPTGP*TPSLPA
Trigger: TGCAGGGAGAGATGGAGTTCAAGGTCCTGTTGGTCT...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGAGACCAACAGGACCTTaGACTCCATCTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWRPTGP*TPSLPA
Trigger: TGCAGGGAGAGATGGAGTTCAAGGTCCTGTTGGTCT...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGCACCAACTGGTCCTTaGAGACCTGGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYAPTGP*RPGGPG
Trigger: TCCCGGTCCCCCAGGTCTTCAAGGACCAGTTGGTGC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCGCACCAACTGGTCCTTaGAGACCTGGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIAPTGP*RPGGPG
Trigger: TCCCGGTCCCCCAGGTCTTCAAGGACCAGTTGGTGC...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCACCAACTGGTCCTTaGAGACCTGGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICAPTGP*RPGGPG
Trigger: TCCCGGTCCCCCAGGTCTTCAAGGACCAGTTGGTGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCTCCATTGGGACCTTaGGGGCCTCTTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICAPLGP*GPLGPG
Trigger: TCCAGGCCCAAGAGGCCCTCAAGGTCCCAATGGAGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTCCAACACCACCAACTaGACCAACAGACCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFSNTTN*TNRPWG
Trigger: CCCCCAGGGTCTGTTGGTTCAGTTGGTGGTGTTGGA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCCCAGGAGGACCCGGTTaGCCAGGATCTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFPGGPG*PGSPSS
Trigger: TGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTGG...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTTTCCTGCAGGTCCCTaGGGACCGACTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIFPAGP*GPTGPV
Trigger: AACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTTCCTGCAGGTCCCTaGGGACCGACTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICFPAGP*GPTGPV
Trigger: AACCGGCCCAGTCGGTCCTCAGGGACCTGCAGGAAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGAGCCAGGGTCACCTTTaGGACCAGGTAAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLSQGHL*DQVSQE
Trigger: CTCCTGGCTTACCTGGTCTCAAAGGTGACCCTGGCT...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAGCCAGGGTCACCTTTaGGACCAGGTAAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFSQGHL*DQVSQE
Trigger: CTCCTGGCTTACCTGGTCTCAAAGGTGACCCTGGCT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATCCTCTGCCGGGCCCTaGCTTCAGAATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSSAGP*LQNEGR
Trigger: TCTGCCTTCATTCTGAAGGCAGGGCCCGGCAGAGGA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCATCGCCAGGGATGTTTaGTACACAGCCATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVIARDV*YTAIGE
Trigger: CTCCCCAATGGCTGTGTAGCAAACATCCCTGGCGAT...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTCCTCTTCCTCCATCTaGACCTGGACGACCCCTTTT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQSSSSI*TWTTPF
Trigger: AAAAGGGGTCGTCCAGGTGCAGATGGAGGAAGAGGA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTCCTCTTCCTCCATCTaGACCTGGACGACCCCTTTT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWSSSSI*TWTTPF
Trigger: AAAAGGGGTCGTCCAGGTGCAGATGGAGGAAGAGGA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGGGGCCATCTACACCTaGCATACCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLGAIYT*HTRLPW
Trigger: CCAGGGCAGCCTGGTATGGCAGGTGTAGATGGCCCC...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGGGGCCATCTACACCTaGCATACCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICGAIYT*HTRLPW
Trigger: CCAGGGCAGCCTGGTATGGCAGGTGTAGATGGCCCC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAACCTCTGACACCATCTaGTCCCTTTACTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITTSDTI*SLYSPG
Trigger: CCCCGGGGAGTAAAGGGAGCAGATGGTGTCAGAGGT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAGGACCTTCTGCACCTaGTTCCCCCTTAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQRTFCT*FPLSTF
Trigger: AAAGGTGCTAAGGGGGAAGCAGGTGCAGAAGGTCCT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTCCAGGAGGACCTTCTaGACCTGCTTCCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLSRRTF*TCFPLS
Trigger: GCTAAGGGGGAAGCAGGTGCAGAAGGTCCTCCTGGA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTGGTCCATCTTGGCCTaGAGCTCCAGGGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLWSILA*SSRETL
Trigger: CAAGGTCTCCCTGGAGCTGCAGGCCAAGATGGACCA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGAGCTTGAGCAGCCTTaGGTGCTGAAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQELEQP*VLKSHS
Trigger: ACTGTGACTCTTCAGCACCCAAGGCTGCTCAAGCTC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGAGCTTGAGCAGCCTTaGGTGCTGAAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVELEQP*VLKSHS
Trigger: ACTGTGACTCTTCAGCACCCAAGGCTGCTCAAGCTC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGACCCATTGGGCCAGGTaGGCCTCTCAGAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMTHWAR*ASQSNP
Trigger: CGGATTGCTCTGAGAGGCCCACCTGGCCCAATGGGT...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACACCACTCTCACCTTTaGCCCCAGATGAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITHHSHL*PQMNQA
Trigger: GGCCTGGTTCATCTGGGGCCAAAGGTGAGAGTGGTG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTCCTGGAGTTCCCCTTaGACCCAGCAAACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFSWSSP*TQQTSW
Trigger: CCACGAGGTTTGCTGGGTCCAAGGGGAACTCCAGGA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTGCCCTGGAGCTCCTaGAGTTCCCCTTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTILPWSS*SSPWTQ
Trigger: CTGGGTCCAAGGGGAACTCCAGGAGCTCCAGGGCAG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCTGCCCTGGAGCTCCTaGAGTTCCCCTTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLLPWSS*SSPWTQ
Trigger: CTGGGTCCAAGGGGAACTCCAGGAGCTCCAGGGCAG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTGCCCTGGAGCTCCTaGAGTTCCCCTTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLPWSS*SSPWTQ
Trigger: CTGGGTCCAAGGGGAACTCCAGGAGCTCCAGGGCAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGTTCCCTTTTGGTCCTaGGGGGCCATCTACACCTGC +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFVPFWS*GAIYTC
Trigger: GCAGGTGTAGATGGCCCCCCAGGACCAAAAGGGAAC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGTTCCCTTTTGGTCCTaGGGGGCCATCTACACCTGC +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLVPFWS*GAIYTC
Trigger: GCAGGTGTAGATGGCCCCCCAGGACCAAAAGGGAAC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAAGACCCTGAGGTCCTaGATTCCCTTGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQKTLRS*IPLLTW
Trigger: CCAGGTCAACAAGGGAATCCAGGACCTCAGGGTCTT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGACCAATTGGACCTTGTaGACCAGGAAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQTNWTL*TRKTLR
Trigger: CCTCAGGGTCTTCCTGGTCCACAAGGTCCAATTGGT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGACCAGGAGGACCAATTaGACCTTGTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQTRRTN*TLWTRK
Trigger: CTTCCTGGTCCACAAGGTCCAATTGGTCCTCCTGGT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGACCCAGGGAATCCAGTaGAACCCTTTGGACCTTGTC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQTQGIQ*NPLDLV
Trigger: GACAAGGTCCAAAGGGTTCCACTGGATTCCCTGGGT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGCCCAGGTTTCCCAGTaGGACCTCTTGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITAQVSQ*DLLHLL
Trigger: CAAGAGGTGCAAGAGGTCCCACTGGGAAACCTGGGC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCGGTTGGTCCCTGTaGTCCAACCACTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTGWSL*SNHSPW
Trigger: CCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCACCAGTCTCACCGGTTaGTCCCTGTGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFTSLTG*SLWSNH
Trigger: GTGGTTGGACCACAGGGACCAACCGGTGAGACTGGT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGCCTGGAGGACCAGGTaGCCCCATGGGACCAACATC +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLAWRTR*PHGTNI
Trigger: GATGTTGGTCCCATGGGGCCACCTGGTCCTCCAGGC...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCCTGGAGGACCAGGTaGCCCCATGGGACCAACATC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICAWRTR*PHGTNI
Trigger: GATGTTGGTCCCATGGGGCCACCTGGTCCTCCAGGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACACCTTGAGGGCCTCTTaGGCCTGGAGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYTLRAS*AWRTRW
Trigger: CCACCTGGTCCTCCAGGCCCAAGAGGCCCTCAAGGT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCTTGAGGGCCTCTTaGGCCTGGAGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTLRAS*AWRTRW
Trigger: CCACCTGGTCCTCCAGGCCCAAGAGGCCCTCAAGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCACCTTGAGGGCCTCTTaGGCCTGGAGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTITLRAS*AWRTRW
Trigger: CCACCTGGTCCTCCAGGCCCAAGAGGCCCTCAAGGT...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCGCCATCATCACCTGGTaGCCCCTTGGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIAIITW*PLGTWR
Trigger: CCTCCAGGTGCCAAGGGGCCACCAGGTGATGATGGC...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCCATCATCACCTGGTaGCCCCTTGGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICAIITW*PLGTWR
Trigger: CCTCCAGGTGCCAAGGGGCCACCAGGTGATGATGGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGGGCCATCATCACCTaGTGGCCCCTTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRAIIT*WPLGTW
Trigger: CCAGGTGCCAAGGGGCCACCAGGTGATGATGGCCCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACAGGGCCATCATCACCTaGTGGCCCCTTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYRAIIT*WPLGTW
Trigger: CCAGGTGCCAAGGGGCCACCAGGTGATGATGGCCCT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGAGGGCCATCATCACCTaGTGGCCCCTTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLRAIIT*WPLGTW
Trigger: CCAGGTGCCAAGGGGCCACCAGGTGATGATGGCCCT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAGGAGGACCTGGTaGGCCAGCCTCACCAGATGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSRRTW*ASLTRW
Trigger: CCATCTGGTGAGGCTGGCCCACCAGGTCCTCCTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTCCCATAGGACCAGGTaGTCCATCTTGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLSHRTR*SILACS
Trigger: GCTGCAGGCCAAGATGGACCACCTGGTCCTATGGGA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCACTGTCACCTTTCTaGCCAGCGGGTCCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPLSPF*PAGPVE
Trigger: CTCTACTGGACCCGCTGGCCAGAAAGGTGACAGTGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCACCACTGTCACCTTTCTaGCCAGCGGGTCCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSPLSPF*PAGPVE
Trigger: CTCTACTGGACCCGCTGGCCAGAAAGGTGACAGTGG...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTTCACCAGGTGGACCTaGAGACCCAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLFTRWT*RPRRPW
Trigger: CCAGGGCCTCCTGGGTCTCCAGGTCCACCTGGTGAA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTCACCAGGTGGACCTaGAGACCCAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICFTRWT*RPRRPW
Trigger: CCAGGGCCTCCTGGGTCTCCAGGTCCACCTGGTGAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCCGCACTCACAACTGTaGACTCAACCCACGAAATTG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWPHSQL*TQPTKL
Trigger: CAATTTCGTGGGTTGAGTTCACAGTTGTGAGTGCGG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCCGAGGGTTGTTACGGTaGAATCCCAGAGCCACCGTT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFRGLLR*NPRATV
Trigger: AACGGTGGCTCTGGGATTTCACCGTAACAACCCTCG...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAGCAGCCTTGGGTGCTaGAGAGTCACAGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSSLGC*RVTVWT
Trigger: AGTCCAGACTGTGACTCTTCAGCACCCAAGGCTGCT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGGACCTGGAGGACCTTaGGGACCTCGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAGPGGP*GPRSPL
Trigger: CAGGGGTGAACGAGGTCCTCAAGGTCCTCCAGGTCC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTCCTGGATTCCCTTGTTaGCCTGGAGGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FPCRLQINSLCAELSRYLPGFPC*PGGPGS
Trigger: GGAGCCTGGGCCTCCAGGTCAACAAGGGAATCCAGG...AAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCCTCTTGGGCCAATTTaGCCAACTTCTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWPLGPI*PTSPLS
Trigger: TGACAGAGGAGAAGTTGGTCAAATTGGCCCAAGAGG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAGGGCCATCGCCACCTaGAGTGCCCTTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKRAIAT*SALWPR
Trigger: CCTGGGCCAAAGGGCACTTCAGGTGGCGATGGCCCT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTAGGGCCATCGCCACCTaGAGTGCCCTTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPRAIAT*SALWPR
Trigger: CCTGGGCCAAAGGGCACTTCAGGTGGCGATGGCCCT...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTTGGTAAAGGCTGAATaGCTTCACCAGGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQLVKAE*LHQVDL
Trigger: CAGGTCCACCTGGTGAAGTCATTCAGCCTTTACCAA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGGGCTGGATTGGTCTaGGTACCCATTGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQRAGLV*VPIGNF
Trigger: GAAATTTCCAATGGGTACTCAGACCAATCCAGCCCG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCGGGCTGGATTGGTCTaGGTACCCATTGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWRAGLV*VPIGNF
Trigger: GAAATTTCCAATGGGTACTCAGACCAATCCAGCCCG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGATGACAGTGGTAGGTaGAATTTTGCCGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQDDSGR*NFAEQR
Trigger: CCTCTGCTCGGCAAAATTTCACCTACCACTGTCATC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCATCATACCAGGCTGCTaGCTGATGACAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVIIPGC*LMTVVG
Trigger: ACCTACCACTGTCATCAGTCAGCAGCCTGGTATGAT...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCATCTCCTCATCATTTaGTCCCAGGAAGCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVHLLII*SQEAKC
Trigger: GCACTTCGCTTCCTGGGATCAAATGATGAGGAGATG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCTCAACCCACGAAATTaGGACTGCAGACCAACTTCG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQLNPRN*DCRPTS
Trigger: CGAAGTTGGTCTGCAGTCGCAATTTCGTGGGTTGAG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCTCAACCCACGAAATTaGGACTGCAGACCAACTTCG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWLNPRN*DCRPTS
Trigger: CGAAGTTGGTCTGCAGTCGCAATTTCGTGGGTTGAG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCCTTCTCCACGCTGATTaGTACCCGATGCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFLLHAD*YPMPLP
Trigger: GGGAAGTGGCATCGGGTAGCAATCAGCGTGGAGAAG...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCCAGGAGGGCCAGGATaGCCACGTTCCCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYPGGPG*PRSPIG
Trigger: TCCAATAGGGGAACGTGGGCATCCTGGCCCTCCTGG...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCAGGAGGGCCAGGATaGCCACGTTCCCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPGGPG*PRSPIG
Trigger: TCCAATAGGGGAACGTGGGCATCCTGGCCCTCCTGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCTGCACCTTCTTTTCCTaGAGCACCAGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVCTFFS*STRKTL
Trigger: CAAGGTCTTCCTGGTGCTGCAGGAAAAGAAGGTGCA...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTGCACCTTCTTTTCCTaGAGCACCAGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWCTFFS*STRKTL
Trigger: CAAGGTCTTCCTGGTGCTGCAGGAAAAGAAGGTGCA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGACCTGGATCACCCTTTaGACCTTCTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQTWITL*TFFSCS
Trigger: GCTGCAGGAAAAGAAGGTGCAAAGGGTGATCCAGGT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAACTCCATCTCTCCCTaGAGGCCCTTGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITNSISP*RPLGTF
Trigger: AAAGGTCCCCAAGGGCCTGCAGGGAGAGATGGAGTT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCTTGTCACCCTTGCTaGCTTTTTGTCCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPCHPC*LFVPAH
Trigger: GTGAGCCGGGACAAAAAGGCAGCAAGGGTGACAAGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCTCCCTTGTCACCCTTaGTGCCTTTTTGTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLLPCHP*CLFVPA
Trigger: AGCCGGGACAAAAAGGCAGCAAGGGTGACAAGGGAG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCCCTCATCACCTTTTTaGCCAAACATCCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQPSSPF*PNIPCC
Trigger: ACAGCAGGGGATGTTTGGGCAAAAAGGTGATGAGGG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACTCTTCCCTCTGCACCTaGAGCTCCAGGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYSSLCT*SSRRTS
Trigger: CGAGGTCCTCCTGGAGCTGCAGGTGCAGAGGGAAGA...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCTTCCCTCTGCACCTaGAGCTCCAGGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSSLCT*SSRRTS
Trigger: CGAGGTCCTCCTGGAGCTGCAGGTGCAGAGGGAAGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCCACAGGACCAGGGATaGCCCGAAGACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYPQDQG*PEDLLD
Trigger: GTCCAGAAGGTCTTCGGGGCATCCCTGGTCCTGTGG...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCCACAGGACCAGGGATaGCCCGAAGACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLPQDQG*PEDLLD
Trigger: GTCCAGAAGGTCTTCGGGGCATCCCTGGTCCTGTGG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCACAGGACCAGGGATaGCCCGAAGACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPQDQG*PEDLLD
Trigger: GTCCAGAAGGTCTTCGGGGCATCCCTGGTCCTGTGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTCCTGCTGGTCCTGGTaGTCCTTCGACAAGCATACC +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFSCWSW*SFDKHT
Trigger: GGTATGCTTGTCGAAGGACCACCAGGACCAGCAGGA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAGGTCCTGCTGGTCCTaGTGGTCCTTCGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFRSCWS*WSFDKH
Trigger: ATGCTTGTCGAAGGACCACCAGGACCAGCAGGACCT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACACCTGCAGGTCCTGCTaGTCCTGGTGGTCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYTCRSC*SWWSFD
Trigger: GTCGAAGGACCACCAGGACCAGCAGGACCTGCAGGT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCTGCAGGTCCTGCTaGTCCTGGTGGTCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTCRSC*SWWSFD
Trigger: GTCGAAGGACCACCAGGACCAGCAGGACCTGCAGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCTGAGCAGAGATGGTTaGTCCTTTGGAACCATCACC +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWLSRDG*SFGTIT
Trigger: GGTGATGGTTCCAAAGGACCAACCATCTCTGCTCAG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCTGAGCAGAGATGGTTaGTCCTTTGGAACCATCACC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVLSRDG*SFGTIT
Trigger: GGTGATGGTTCCAAAGGACCAACCATCTCTGCTCAG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCCATTGGGCCAGGTaGGCCTCTCAGAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTHWAR*ASQSNP
Trigger: CGGATTGCTCTGAGAGGCCCACCTGGCCCAATGGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAGGGCCCTGAGGACCTaGATCACCACTCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITRALRT*ITTLTF
Trigger: AAAGGTGAGAGTGGTGATCCAGGTCCTCAGGGCCCT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAGGGCCCTGAGGACCTaGATCACCACTCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFRALRT*ITTLTF
Trigger: AAAGGTGAGAGTGGTGATCCAGGTCCTCAGGGCCCT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAGGTTTTCCCGTTaGACCAGGGGGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSRFSR*TRGTLD
Trigger: GTCCAGGGTCCCCCTGGTCCAACGGGAAAACCTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATCCTCCATCTGCACCTaGACGACCCCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSSICT*TTPFSR
Trigger: CCTGGAAAAAGGGGTCGTCCAGGTGCAGATGGAGGA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCAGTGACCTTTGTCACCTaGCAGACCCGGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSVTFVT*QTRKSI
Trigger: GATGGACTTCCGGGTCTGCCAGGTGACAAAGGTCAC...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGACCCAGCAAACCTCGTaGGCCAGCTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMTQQTS*ASFTWK
Trigger: CTTCCAGGTGAAGCTGGCCCACGAGGTTTGCTGGGT...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAATCCTGGAGTTCCCCTTaGACCCAGCAAACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LQGTKYYSRNLTVEIREKSWSSP*TQQTSW
Trigger: CCACGAGGTTTGCTGGGTCCAAGGGGAACTCCAGGA...TTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp ACTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAGTTCCCTTTTGGTCCTaGGGGGCCATCTACACCTGC +
Preference number: 4 (lower is better)
Translates to: TTGDKILLKESHSGDQGKVPFWS*GAIYTC
Trigger: GCAGGTGTAGATGGCCCCCCAGGACCAAAAGGGAAC...TTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGGCCCAGGCTCCCCTTaGGGACCCATGTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICGPGSP*GPMFPF
Trigger: AAAAGGGAACATGGGTCCCCAAGGGGAGCCTGGGCC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp GACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGGGCCCAGGCTCCCCTTaGGGACCCATGTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: DKILLKESHSGDQGKRHVGPGSP*GPMFPF
Trigger: AAAAGGGAACATGGGTCCCCAAGGGGAGCCTGGGCC...CACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACACCTGGGTCTCCAGTTaGGCCTGCTCGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYTWVSS*ACSTFG
Trigger: CCCAAAGGTCGAGCAGGCCCAACTGGAGACCCAGGT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCTGGGTCTCCAGTTaGGCCTGCTCGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTWVSS*ACSTFG
Trigger: CCCAAAGGTCGAGCAGGCCCAACTGGAGACCCAGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTGACCCCGAGGGCCTaGTTTGCCAGCTACTCCCCG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKLTPRA*FASYSP
Trigger: CGGGGAGTAGCTGGCAAACCAGGCCCTCGGGGTCAG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTACCTCGAGGACCCGTTaGACCACGCTGACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPTSRTR*TTLTPR
Trigger: CCTCGGGGTCAGCGTGGTCCAACGGGTCCTCGAGGT...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATCCAGGGAATCCAACTaGACCCTGAGGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSRESN*TLRSLR
Trigger: CCTCAAGGACCTCAGGGTCCAGTTGGATTCCCTGGA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATCCAACCACTCCCCCTaGCCCAGGAGGGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKSNHSP*PRRAGL
Trigger: AAGACCGGCCCTCCTGGGCCAGGGGGAGTGGTTGGA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTTCCAACCACTCCCCCTaGCCCAGGAGGGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPSNHSP*PRRAGL
Trigger: AAGACCGGCCCTCCTGGGCCAGGGGGAGTGGTTGGA...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGATACCTTGAGGACCTaGATCACCCTTTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVDTLRT*ITLCTF
Trigger: GAAGGTGCAAAGGGTGATCCAGGTCCTCAAGGTATC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTGGTCCTTGAAGACCTaGGGGACCGGGAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICWSLKT*GTGRAI
Trigger: AATGGCCCTCCCGGTCCCCCAGGTCTTCAAGGACCA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAGGGGCACCAACTaGTCCTTGAAGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSRGTN*SLKTWG
Trigger: CCCCCAGGTCTTCAAGGACCAGTTGGTGCCCCTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTCCAGGGGCACCAACTaGTCCTTGAAGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTISRGTN*SLKTWG
Trigger: CCCCCAGGTCTTCAAGGACCAGTTGGTGCCCCTGGA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGACCTTTTTCACCAGGTaGGCCTGGCAGACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLTFFTR*AWQTLK
Trigger: CTTCAGGGTCTGCCAGGCCCACCTGGTGAAAAAGGT...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGACCAGGTGGCCCCATaGGACCAACATCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLDQVAP*DQHPHF
Trigger: AAAATGGGGATGTTGGTCCCATGGGGCCACCTGGTC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGACCAGGTGGCCCCATaGGACCAACATCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITDQVAP*DQHPHF
Trigger: AAAATGGGGATGTTGGTCCCATGGGGCCACCTGGTC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGCCTGGAGGACCAGGTaGCCCCATGGGACCAACATC +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAAWRTR*PHGTNI
Trigger: GATGTTGGTCCCATGGGGCCACCTGGTCCTCCAGGC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAACCTTGAGGGCCTCTTaGGCCTGGAGGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVATLRAS*AWRTRW
Trigger: CCACCTGGTCCTCCAGGCCCAAGAGGCCCTCAAGGT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGTCCATCAGCTCCATTaGGACCTTGAGGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLVHQLH*DLEGLL
Trigger: CAAGAGGCCCTCAAGGTCCCAATGGAGCTGATGGAC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATGGCCCCTTGGCACCTaGAGGTCCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKWPLGT*RSSSSR
Trigger: CCTGGAGCTGCTGGACCTCCAGGTGCCAAGGGGCCA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGCCATCATCACCTGGTaGCCCCTTGGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAAIITW*PLGTWR
Trigger: CCTCCAGGTGCCAAGGGGCCACCAGGTGATGATGGC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATCCAGGAGGACCTGGTaGGCCAGCCTCACCAGATGG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVASRRTW*ASLTRW
Trigger: CCATCTGGTGAGGCTGGCCCACCAGGTCCTCCTGGA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTCCCTGAGGACCGACTaGGCCGGTTTTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLSLRTD*AGFSRR
Trigger: CCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAGGGA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCCTGAGGACCGACTaGGCCGGTTTTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSLRTD*AGFSRR
Trigger: CCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAGGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAGACCCAGGAGGCCCTaGAAGACCACTGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITRPRRP*KTTVTF
Trigger: AAAGGTGACAGTGGTCTTCCAGGGCCTCCTGGGTCT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAGACCCAGGAGGCCCTaGAAGACCACTGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFRPRRP*KTTVTF
Trigger: AAAGGTGACAGTGGTCTTCCAGGGCCTCCTGGGTCT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGAGACCCAGGAGGCCCTaGAAGACCACTGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLRPRRP*KTTVTF
Trigger: AAAGGTGACAGTGGTCTTCCAGGGCCTCCTGGGTCT...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATTCACCAGGTGGACCTaGAGACCCAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAFTRWT*RPRRPW
Trigger: CCAGGGCCTCCTGGGTCTCCAGGTCCACCTGGTGAA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAATGACTTCACCAGGTaGACCTGGAGACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITNDFTR*TWRPRR
Trigger: CCTCCTGGGTCTCCAGGTCCACCTGGTGAAGTCATT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GAAGTCAGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGTTCAAAACTTGCATGTaGCACAAAATGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: EVRMAELQVFTSSGWIGLFKTCM*HKMGWW
Trigger: CCACCAACCCATTTTGTGCCACATGCAAGTTTTGAA...CAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GAAGTCAGGATGGCTGAGTTGCAGGTCTTTACAAGTTCGGGCTGGATTGGTCTGAGGAGAGTTGAGAATTaGGAATCAAGAATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: EVRMAELQVFTSSGWIGLRRVEN*ESRISP
Trigger: AGGGCTGATTCTTGATTCCCAATTCTCAACTCTCCT...CAGACCAATCCAGCCCGAACTTGTAAAGACCTGCAACTCAGCCATCCTGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCCCTGCCTTCAGAATaGAGGCAGATGAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICALPSE*RQMRGF
Trigger: GAAGCCCCTCATCTGCCTTCATTCTGAAGGCAGGGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGCCCTGCCTTCAGAATaGAGGCAGATGAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYALPSE*RQMRGF
Trigger: GAAGCCCCTCATCTGCCTTCATTCTGAAGGCAGGGC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGAGCAGCCTTGGGTGCTaGAGAGTCACAGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMSSLGC*RVTVWT
Trigger: AGTCCAGACTGTGACTCTTCAGCACCCAAGGCTGCT...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCCTCGTTCACCCCTGTaGCCTTTGTCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYPRSPL*PLSPGR
Trigger: TCTGCCAGGTGACAAAGGTCACAGGGGTGAACGAGG...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCTCGTTCACCCCTGTaGCCTTTGTCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPRSPL*PLSPGR
Trigger: TCTGCCAGGTGACAAAGGTCACAGGGGTGAACGAGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGGACCTGGAGGACCTTaGGGACCTCGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKGPGGP*GPRSPL
Trigger: CAGGGGTGAACGAGGTCCTCAAGGTCCTCCAGGTCC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp GTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTAACAAAAGGACCTGGAGGACCTTaGGGACCTCGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: VDSRLIPYVLSYLDILTKGPGGP*GPRSPL
Trigger: CAGGGGTGAACGAGGTCCTCAAGGTCCTCCAGGTCC...TTTTGTTAAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR TCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATACCTGGATTCCCTTGTTaGCCTGGAGGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIIPGFPC*PGGPGS
Trigger: GGAGCCTGGGCCTCCAGGTCAACAAGGGAATCCAGG...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGGACCAGGAAGACCCTaGGGTCCTGGATTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICGPGRP*GPGFPC
Trigger: ACAAGGGAATCCAGGACCTCAGGGTCTTCCTGGTCC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCCTTCTTTCCCAGGATaGCCAGGAGGCCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIPSFPG*PGGPSA
Trigger: TGCTGATGGGCCTCCTGGTCATCCTGGGAAAGAAGG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCTTCTTTCCCAGGATaGCCAGGAGGCCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPSFPG*PGGPSA
Trigger: TGCTGATGGGCCTCCTGGTCATCCTGGGAAAGAAGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCTCTTGCACCTCTTaGACCTCGAGGACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTSCTS*TSRTRW
Trigger: CCAACGGGTCCTCGAGGTTCAAGAGGTGCAAGAGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACACCTCTTGCACCTCTTaGACCTCGAGGACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYTSCTS*TSRTRW
Trigger: CCAACGGGTCCTCGAGGTTCAAGAGGTGCAAGAGGT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGACCTCTTGCACCTCTTaGACCTCGAGGACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLTSCTS*TSRTRW
Trigger: CCAACGGGTCCTCGAGGTTCAAGAGGTGCAAGAGGT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCCACGTTCTCCTGGTaGGCCAACTGGACCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPTFSW*ANWTWW
Trigger: CCACCAGGTCCAGTTGGCTCACCAGGAGAACGTGGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAGACCAACAGGACCTTaGACTCCATCTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFRPTGP*TPSLPA
Trigger: TGCAGGGAGAGATGGAGTTCAAGGTCCTGTTGGTCT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGAGACCAACAGGACCTTaGACTCCATCTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLRPTGP*TPSLPA
Trigger: TGCAGGGAGAGATGGAGTTCAAGGTCCTGTTGGTCT...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAACACCACCAACTaGACCAACAGACCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSNTTN*TNRPWG
Trigger: CCCCCAGGGTCTGTTGGTTCAGTTGGTGGTGTTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCCAGGAGGACCCGGTTaGCCAGGATCTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLPGGPG*PGSPSS
Trigger: TGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTGG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCCAGGAGGACCCGGTTaGCCAGGATCTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYPGGPG*PGSPSS
Trigger: TGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTGG...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCAGGAGGACCCGGTTaGCCAGGATCTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPGGPG*PGSPSS
Trigger: TGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCCAGGAGGACCCGGTTaGCCAGGATCTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIPGGPG*PGSPSS
Trigger: TGAAGATGGAGATCCTGGTCAACCGGGTCCTCCTGG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGCCAGGGTCACCTTTaGGACCAGGTAAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSQGHL*DQVSQE
Trigger: CTCCTGGCTTACCTGGTCTCAAAGGTGACCCTGGCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTTACCCTTTGGGCCTTaGGGACCTGGTAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFLPFGP*GPGKPG
Trigger: TCCAGGTTTACCAGGTCCTCAAGGCCCAAAGGGTAA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCTTCCACCAACAAGCTaGGAGTACTGTGTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLLPPTS*EYCVPL
Trigger: TAGGGGCACACAGTACTCTCAGCTTGTTGGTGGAAG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370096.9
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTCCTCTGCCGGGCCCTaGCTTCAGAATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTISSAGP*LQNEGR
Trigger: TCTGCCTTCATTCTGAAGGCAGGGCCCGGCAGAGGA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCTCTGCCGGGCCCTaGCTTCAGAATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSSAGP*LQNEGR
Trigger: TCTGCCTTCATTCTGAAGGCAGGGCCCGGCAGAGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAATCGCCAGGGATGTTTaGTACACAGCCATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITIARDV*YTAIGE
Trigger: CTCCCCAATGGCTGTGTAGCAAACATCCCTGGCGAT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCCACGAAATTGCGACTaGAGACCAACTTCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQPRNCD*RPTSSF
Trigger: AAAGGACGAAGTTGGTCTGCAGTCGCAATTTCGTGG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCTCACAGTAGTCATATaGTGCCTTGGGATCACCTGT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVLTVVI*CLGITC
Trigger: ACAGGTGATCCCAAGGCAGCATATGACTACTGTGAG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAACCAGGCTCAACCACTaGTGGTTCTCCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITTRLNH*WFSFLS
Trigger: GGACAGAAAGGAGAACCAGCAGTGGTTGAGCCTGGT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCCTCGATCTCCCTTTaGCCCAGGTTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPSISL*PRFSWH
Trigger: ATGCCAGGAGAACCTGGGGCAAAGGGAGATCGAGGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAGGGGCCATCTACACCTaGCATACCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLGAIYT*HTRLPW
Trigger: CCAGGGCAGCCTGGTATGGCAGGTGTAGATGGCCCC...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCTCTGACACCATCTaGTCCCTTTACTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTSDTI*SLYSPG
Trigger: CCCCGGGGAGTAAAGGGAGCAGATGGTGTCAGAGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGTCTCCAGTTGGGCCTaGTCGACCTTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYVSSWA*STFGSF
Trigger: GAAGGACCCAAAGGTCGAGCAGGCCCAACTGGAGAC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGTCTCCAGTTGGGCCTaGTCGACCTTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLVSSWA*STFGSF
Trigger: GAAGGACCCAAAGGTCGAGCAGGCCCAACTGGAGAC...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCGTCTCCAGTTGGGCCTaGTCGACCTTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIVSSWA*STFGSF
Trigger: GAAGGACCCAAAGGTCGAGCAGGCCCAACTGGAGAC...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGTCTCCAGTTGGGCCTaGTCGACCTTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICVSSWA*STFGSF
Trigger: GAAGGACCCAAAGGTCGAGCAGGCCCAACTGGAGAC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCCAGCTACTCCCCGTaGACCTTTCTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICASYSP*TFLSIG
Trigger: GCCAATGGAGAGAAAGGTGCACGGGGAGTAGCTGGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGCCAGCTACTCCCCGTaGACCTTTCTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYASYSP*TFLSIG
Trigger: GCCAATGGAGAGAAAGGTGCACGGGGAGTAGCTGGC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCATCGCCACCTGAAGTaGCCTTTGGCCCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICHRHLK*PLAQVS
Trigger: GGAAACCTGGGCCAAAGGGCACTTCAGGTGGCGATG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCAGGAGGGCCGGTCTTaGCTTGAAATCCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICQEGRS*LEIQSP
Trigger: GGGAGACTGGATTTCAAGGCAAGACCGGCCCTCCTG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGGCCCTGGGTTCCCTaGTTCTCCAGGTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRPWVP*FSRFTL
Trigger: AAGGGTGAACCTGGAGAAGCAGGGAACCCAGGGCCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGAGGCCCTGGGTTCCCTaGTTCTCCAGGTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLRPWVP*FSRFTL
Trigger: AAGGGTGAACCTGGAGAAGCAGGGAACCCAGGGCCT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAGGACCTTCTGCACCTaGTTCCCCCTTAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFRTFCT*FPLSTF
Trigger: AAAGGTGCTAAGGGGGAAGCAGGTGCAGAAGGTCCT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAGGACCTTCTGCACCTaGTTCCCCCTTAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITRTFCT*FPLSTF
Trigger: AAAGGTGCTAAGGGGGAAGCAGGTGCAGAAGGTCCT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAGGAGGACCTTCTaGACCTGCTTCCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSRRTF*TCFPLS
Trigger: GCTAAGGGGGAAGCAGGTGCAGAAGGTCCTCCTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTGGTCCATCTTGGCCTaGAGCTCCAGGGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICWSILA*SSRETL
Trigger: CAAGGTCTCCCTGGAGCTGCAGGCCAAGATGGACCA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCTGCATCTGCTTGCATaGCTTCAGTATGTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQLHLLA*LQYVFS
Trigger: CGAGAAGACATACTGAAGGCATGCAAGCAGATGCAG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGTTTGCCTCCGTCTGTaGTATTGTCTCCTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVVCLRL*YCLLSY
Trigger: GTAACTGAGGAGACAATAGCACAGACGGAGGCAAAC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370096.9
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGAGGGGATAGTCTTCTaGGGCAGGTTTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLEGIVF*GRFSSV
Trigger: CACACTGGAAAACCTGCCCCAGAAGACTATCCCCTC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGAGCTTGAGCAGCCTTaGGTGCTGAAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLELEQP*VLKSHS
Trigger: ACTGTGACTCTTCAGCACCCAAGGCTGCTCAAGCTC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAGGCTCAACCACTGCTaGTTCTCCTTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQRLNHC*FSFLSF
Trigger: AAAGGACAGAAAGGAGAACCAGCAGTGGTTGAGCCT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAATCCTGCTGGTCCTGGTaGTCCTTCGACAAGCATACC +
Preference number: 4 (lower is better)
Translates to: LQGTKYYSRNLTVEIREKSCWSW*SFDKHT
Trigger: GGTATGCTTGTCGAAGGACCACCAGGACCAGCAGGA...TTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCTTCCTGAGCAGAGATaGTTGGTCCTTTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQLPEQR*LVLWNH
Trigger: ATGGTTCCAAAGGACCAACCATCTCTGCTCAGGAAG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTACCCATTGGGCCAGGTaGGCCTCTCAGAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: FPCRLQINSLCAELSRYLTHWAR*ASQSNP
Trigger: CGGATTGCTCTGAGAGGCCCACCTGGCCCAATGGGT...AAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCACCACTCTCACCTTTaGCCCCAGATGAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYHHSHL*PQMNQA
Trigger: GGCCTGGTTCATCTGGGGCCAAAGGTGAGAGTGGTG...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCACCACTCTCACCTTTaGCCCCAGATGAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICHHSHL*PQMNQA
Trigger: GGCCTGGTTCATCTGGGGCCAAAGGTGAGAGTGGTG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp GACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGCACCACTCTCACCTTTaGCCCCAGATGAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: DKILLKESHSGDQGKRHVHHSHL*PQMNQA
Trigger: GGCCTGGTTCATCTGGGGCCAAAGGTGAGAGTGGTG...CACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGTGACCTTTGTCACCTaGCAGACCCGGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LQGTKYYSRNLTVEIREKVTFVT*QTRKSI
Trigger: GATGGACTTCCGGGTCTGCCAGGTGACAAAGGTCAC...TTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTGGGCCAGCTTCACCTaGAAGACCTCTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFWASFT*KTSWSN
Trigger: ATTGGACCAAGAGGTCTTCCAGGTGAAGCTGGCCCA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCACCCAGCAAACCTCGTaGGCCAGCTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTITQQTS*ASFTWK
Trigger: CTTCCAGGTGAAGCTGGCCCACGAGGTTTGCTGGGT...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGACCCAGCAAACCTCGTaGGCCAGCTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLTQQTS*ASFTWK
Trigger: CTTCCAGGTGAAGCTGGCCCACGAGGTTTGCTGGGT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCCAGCAAACCTCGTaGGCCAGCTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTQQTS*ASFTWK
Trigger: CTTCCAGGTGAAGCTGGCCCACGAGGTTTGCTGGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCTGGAGTTCCCCTTaGACCCAGCAAACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSWSSP*TQQTSW
Trigger: CCACGAGGTTTGCTGGGTCCAAGGGGAACTCCAGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTCTGCCCTGGAGCTCCTaGAGTTCCCCTTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPLPWSS*SSPWTQ
Trigger: CTGGGTCCAAGGGGAACTCCAGGAGCTCCAGGGCAG...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTACTGCCCTGGAGCTCCTaGAGTTCCCCTTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLLPWSS*SSPWTQ
Trigger: CTGGGTCCAAGGGGAACTCCAGGAGCTCCAGGGCAG...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATACTGCCCTGGAGCTCCTaGAGTTCCCCTTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIILPWSS*SSPWTQ
Trigger: CTGGGTCCAAGGGGAACTCCAGGAGCTCCAGGGCAG...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGTTCCCTTTTGGTCCTaGGGGGCCATCTACACCTGC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYVPFWS*GAIYTC
Trigger: GCAGGTGTAGATGGCCCCCCAGGACCAAAAGGGAAC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGTTCCCTTTTGGTCCTaGGGGGCCATCTACACCTGC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICVPFWS*GAIYTC
Trigger: GCAGGTGTAGATGGCCCCCCAGGACCAAAAGGGAAC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGAAGACCCTGAGGTCCTaGATTCCCTTGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLKTLRS*IPLLTW
Trigger: CCAGGTCAACAAGGGAATCCAGGACCTCAGGGTCTT...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCACCAATTGGACCTTGTaGACCAGGAAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFTNWTL*TRKTLR
Trigger: CCTCAGGGTCTTCCTGGTCCACAAGGTCCAATTGGT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCCCAGGTTTCCCAGTaGGACCTCTTGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICAQVSQ*DLLHLL
Trigger: CAAGAGGTGCAAGAGGTCCCACTGGGAAACCTGGGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAACCGGTTGGTCCCTGTaGTCCAACCACTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKTGWSL*SNHSPW
Trigger: CCAGGGGGAGTGGTTGGACCACAGGGACCAACCGGT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCAGTCTCACCGGTTaGTCCCTGTGGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTSLTG*SLWSNH
Trigger: GTGGTTGGACCACAGGGACCAACCGGTGAGACTGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGCCTGGAGGACCAGGTaGCCCCATGGGACCAACATC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKAWRTR*PHGTNI
Trigger: GATGTTGGTCCCATGGGGCCACCTGGTCCTCCAGGC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTGCCTGGAGGACCAGGTaGCCCCATGGGACCAACATC +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPAWRTR*PHGTNI
Trigger: GATGTTGGTCCCATGGGGCCACCTGGTCCTCCAGGC...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACTCCTCTTTCTCCTTTaGGACCGCCTACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITLLFLL*DRLHLL
Trigger: AAGCAGGTGTAGGCGGTCCCAAAGGAGAAAGAGGAG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATCCCTGAGGACCGACTaGGCCGGTTTTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVASLRTD*AGFSRR
Trigger: CCTCCTGGAAAAACCGGCCCAGTCGGTCCTCAGGGA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCCATAGGACCAGGTaGTCCATCTTGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSHRTR*SILACS
Trigger: GCTGCAGGCCAAGATGGACCACCTGGTCCTATGGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCCACTGTCACCTTTCTaGCCAGCGGGTCCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLPLSPF*PAGPVE
Trigger: CTCTACTGGACCCGCTGGCCAGAAAGGTGACAGTGG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCACTGTCACCTTTCTaGCCAGCGGGTCCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPLSPF*PAGPVE
Trigger: CTCTACTGGACCCGCTGGCCAGAAAGGTGACAGTGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAAGTTCGGGCTGGATTaGTCTGAGTACCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQKFGLD*SEYPLE
Trigger: TTCCAATGGGTACTCAGACCAATCCAGCCCGAACTT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCCAATATTCACCATCTaGGAAGTCAGGATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQPIFTI*EVRMAE
Trigger: CTCAGCCATCCTGACTTCCCAGATGGTGAATATTGG...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp ACTATATTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGAGCCCTGCCTTCAGAATaGAGGCAGATGAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TIFPCRLQINSLCAELSRALPSE*RQMRGF
Trigger: GAAGCCCCTCATCTGCCTTCATTCTGAAGGCAGGGC...TCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAATATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCCGCACTCACAACTGTaGACTCAACCCACGAAATTG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLPHSQL*TQPTKL
Trigger: CAATTTCGTGGGTTGAGTTCACAGTTGTGAGTGCGG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCGAGGGTTGTTACGGTaGAATCCCAGAGCCACCGTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRGLLR*NPRATV
Trigger: AACGGTGGCTCTGGGATTTCACCGTAACAACCCTCG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR TCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGAGCAGCCTTGGGTGCTaGAGAGTCACAGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLSSLGC*RVTVWT
Trigger: AGTCCAGACTGTGACTCTTCAGCACCCAAGGCTGCT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACAGCAGCCTTGGGTGCTaGAGAGTCACAGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYSSLGC*RVTVWT
Trigger: AGTCCAGACTGTGACTCTTCAGCACCCAAGGCTGCT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGCAGCCTTGGGTGCTaGAGAGTCACAGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSSLGC*RVTVWT
Trigger: AGTCCAGACTGTGACTCTTCAGCACCCAAGGCTGCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp GACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGAGCAGCCTTGGGTGCTaGAGAGTCACAGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: DKILLKESHSGDQGKRHVSSLGC*RVTVWT
Trigger: AGTCCAGACTGTGACTCTTCAGCACCCAAGGCTGCT...CACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp ACTATATTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGACCTCGTTCACCCCTGTaGCCTTTGTCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TIFPCRLQINSLCAELSRPRSPL*PLSPGR
Trigger: TCTGCCAGGTGACAAAGGTCACAGGGGTGAACGAGG...TCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAATATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTCTCCTGCTTGACCTaGAGGACCTGGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICFSCLT*RTWVSS
Trigger: ACTGGAGACCCAGGTCCTTCAGGTCAAGCAGGAGAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAAGCCAGGGTCACCTTTaGGACCAGGTAAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVASQGHL*DQVSQE
Trigger: CTCCTGGCTTACCTGGTCTCAAAGGTGACCCTGGCT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCGGGCTGGATTGGTCTaGGTACCCATTGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLRAGLV*VPIGNF
Trigger: GAAATTTCCAATGGGTACTCAGACCAATCCAGCCCG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGGAAGTCAGGATGGCTaGGTTGCAGGTCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLGSQDG*VAGLYK
Trigger: CTTGTAAAGACCTGCAACTCAGCCATCCTGACTTCC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGGAAGTCAGGATGGCTaGGTTGCAGGTCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITGSQDG*VAGLYK
Trigger: CTTGTAAAGACCTGCAACTCAGCCATCCTGACTTCC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGGATGACAGTGGTAGGTaGAATTTTGCCGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLDDSGR*NFAEQR
Trigger: CCTCTGCTCGGCAAAATTTCACCTACCACTGTCATC...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCATCTCCTCATCATTTaGTCCCAGGAAGCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLHLLII*SQEAKC
Trigger: GCACTTCGCTTCCTGGGATCAAATGATGAGGAGATG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp ACTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAACTTCCACCAACAAGCTaGGAGTACTGTGTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: TTGDKILLKESHSGDQGKLPPTS*EYCVPL
Trigger: TAGGGGCACACAGTACTCTCAGCTTGTTGGTGGAAG...TTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp ACTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAATCGCCAGGGATGTTTaGTACACAGCCATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TTGDKILLKESHSGDQGKIARDV*YTAIGE
Trigger: CTCCCCAATGGCTGTGTAGCAAACATCCCTGGCGAT...TTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACTCAACCCACGAAATTaGGACTGCAGACCAACTTCG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITLNPRN*DCRPTS
Trigger: CGAAGTTGGTCTGCAGTCGCAATTTCGTGGGTTGAG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTTCTCCACGCTGATTaGTACCCGATGCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLLHAD*YPMPLP
Trigger: GGGAAGTGGCATCGGGTAGCAATCAGCGTGGAGAAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACAGGACCCATAATACCTaGAGGTCCTGCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYRTHNT*RSCWSW
Trigger: CCAGGACCAGCAGGACCTGCAGGTATTATGGGTCCT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGGACCCATAATACCTaGAGGTCCTGCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRTHNT*RSCWSW
Trigger: CCAGGACCAGCAGGACCTGCAGGTATTATGGGTCCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp CTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAATCCTCTTCCTCCATCTaGACCTGGACGACCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LQGTKYYSRNLTVEIREKSSSSI*TWTTPF
Trigger: AAAAGGGGTCGTCCAGGTGCAGATGGAGGAAGAGGA...TTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACCCTCGATCTCCCTTTaGCCCAGGTTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAPSISL*PRFSWH
Trigger: ATGCCAGGAGAACCTGGGGCAAAGGGAGATCGAGGG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTCCCTCGATCTCCCTTTaGCCCAGGTTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FPCRLQINSLCAELSRYLPSISL*PRFSWH
Trigger: ATGCCAGGAGAACCTGGGGCAAAGGGAGATCGAGGG...AAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGTCTCCAGTTGGGCCTaGTCGACCTTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAVSSWA*STFGSF
Trigger: GAAGGACCCAAAGGTCGAGCAGGCCCAACTGGAGAC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGCCAGCTACTCCCCGTaGACCTTTCTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAASYSP*TFLSIG
Trigger: GCCAATGGAGAGAAAGGTGCACGGGGAGTAGCTGGC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCAGGAGGGCCAGGATaGCCACGTTCCCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPGGPG*PRSPIG
Trigger: TCCAATAGGGGAACGTGGGCATCCTGGCCCTCCTGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTCCTTTCAGTCCAGGTaGACCCTGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLSFQSR*TLSSRK
Trigger: CTTCCTGGAGCTCAGGGTGCACCTGGACTGAAAGGA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCTTTCAGTCCAGGTaGACCCTGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSFQSR*TLSSRK
Trigger: CTTCCTGGAGCTCAGGGTGCACCTGGACTGAAAGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACAACTCCATCTCTCCCTaGAGGCCCTTGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYNSISP*RPLGTF
Trigger: AAAGGTCCCCAAGGGCCTGCAGGGAGAGATGGAGTT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAACTCCATCTCTCCCTaGAGGCCCTTGGGGACCTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICNSISP*RPLGTF
Trigger: AAAGGTCCCCAAGGGCCTGCAGGGAGAGATGGAGTT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCTTGTCACCCTTGCTaGCTTTTTGTCCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPCHPC*LFVPAH
Trigger: GTGAGCCGGGACAAAAAGGCAGCAAGGGTGACAAGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTCCCTTGTCACCCTTaGTGCCTTTTTGTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLPCHP*CLFVPA
Trigger: AGCCGGGACAAAAAGGCAGCAAGGGTGACAAGGGAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTCCCTTGTCACCCTTaGTGCCTTTTTGTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTILPCHP*CLFVPA
Trigger: AGCCGGGACAAAAAGGCAGCAAGGGTGACAAGGGAG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACTGCCCAAACATCCCCTaGTGTCCTCTAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYCPNIP*CPLGPG
Trigger: ACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCA...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTGCCCAAACATCCCCTaGTGTCCTCTAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTICPNIP*CPLGPG
Trigger: ACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTGCCCAAACATCCCCTaGTGTCCTCTAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICCPNIP*CPLGPG
Trigger: ACCAGGTCCTAGAGGACAGCAGGGGATGTTTGGGCA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCCTCATCACCTTTTTaGCCAAACATCCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPSSPF*PNIPCC
Trigger: ACAGCAGGGGATGTTTGGGCAAAAAGGTGATGAGGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATCTTCCCTCTGCACCTaGAGCTCCAGGAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKSSLCT*SSRRTS
Trigger: CGAGGTCCTCCTGGAGCTGCAGGTGCAGAGGGAAGA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATCCAGGAGGACCTTCTaGACCTGCTTCCCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVASRRTF*TCFPLS
Trigger: GCTAAGGGGGAAGCAGGTGCAGAAGGTCCTCCTGGA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTCCTGCTGGTCCTGGTaGTCCTTCGACAAGCATACC +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTISCWSW*SFDKHT
Trigger: GGTATGCTTGTCGAAGGACCACCAGGACCAGCAGGA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCTGCTGGTCCTGGTaGTCCTTCGACAAGCATACC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSCWSW*SFDKHT
Trigger: GGTATGCTTGTCGAAGGACCACCAGGACCAGCAGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCAGGTCCTGCTGGTCCTaGTGGTCCTTCGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIRSCWS*WSFDKH
Trigger: ATGCTTGTCGAAGGACCACCAGGACCAGCAGGACCT...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGGTCCTGCTGGTCCTaGTGGTCCTTCGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRSCWS*WSFDKH
Trigger: ATGCTTGTCGAAGGACCACCAGGACCAGCAGGACCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAACCTGCAGGTCCTGCTaGTCCTGGTGGTCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKTCRSC*SWWSFD
Trigger: GTCGAAGGACCACCAGGACCAGCAGGACCTGCAGGT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAACCTGCAGGTCCTGCTaGTCCTGGTGGTCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLTCRSC*SWWSFD
Trigger: GTCGAAGGACCACCAGGACCAGCAGGACCTGCAGGT...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATACCTGCAGGTCCTGCTaGTCCTGGTGGTCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: LLKESHSGDQGKRHVFNYTCRSC*SWWSFD
Trigger: GTCGAAGGACCACCAGGACCAGCAGGACCTGCAGGT...ATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCTGAGCAGAGATGGTTaGTCCTTTGGAACCATCACC +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLLSRDG*SFGTIT
Trigger: GGTGATGGTTCCAAAGGACCAACCATCTCTGCTCAG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGGGCCCTGAGGACCTaGATCACCACTCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRALRT*ITTLTF
Trigger: AAAGGTGAGAGTGGTGATCCAGGTCCTCAGGGCCCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTTCCAGGTTTTCCCGTTaGACCAGGGGGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPSRFSR*TRGTLD
Trigger: GTCCAGGGTCCCCCTGGTCCAACGGGAAAACCTGGA...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTAACAAAATCCAGGTTTTCCCGTTaGACCAGGGGGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VDSRLIPYVLSYLDILTKSRFSR*TRGTLD
Trigger: GTCCAGGGTCCCCCTGGTCCAACGGGAAAACCTGGA...TTTTGTTAAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR CCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATATCCAGGTTTTCCCGTTaGACCAGGGGGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIISRFSR*TRGTLD
Trigger: GTCCAGGGTCCCCCTGGTCCAACGGGAAAACCTGGA...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTCCTCCATCTGCACCTaGACGACCCCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLSSICT*TTPFSR
Trigger: CCTGGAAAAAGGGGTCGTCCAGGTGCAGATGGAGGA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCTCCATCTGCACCTaGACGACCCCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSSICT*TTPFSR
Trigger: CCTGGAAAAAGGGGTCGTCCAGGTGCAGATGGAGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGTGACCTTTGTCACCTaGCAGACCCGGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYVTFVT*QTRKSI
Trigger: GATGGACTTCCGGGTCTGCCAGGTGACAAAGGTCAC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGTGACCTTTGTCACCTaGCAGACCCGGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICVTFVT*QTRKSI
Trigger: GATGGACTTCCGGGTCTGCCAGGTGACAAAGGTCAC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAATGGGCCAGCTTCACCTaGAAGACCTCTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: LQGTKYYSRNLTVEIREKWASFT*KTSWSN
Trigger: ATTGGACCAAGAGGTCTTCCAGGTGAAGCTGGCCCA...TTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGGGCCAGCTTCACCTaGAAGACCTCTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMWASFT*KTSWSN
Trigger: ATTGGACCAAGAGGTCTTCCAGGTGAAGCTGGCCCA...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAACCCAGCAAACCTCGTaGGCCAGCTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVATQQTS*ASFTWK
Trigger: CTTCCAGGTGAAGCTGGCCCACGAGGTTTGCTGGGT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTTCCTGGAGTTCCCCTTaGACCCAGCAAACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FPCRLQINSLCAELSRYLSWSSP*TQQTSW
Trigger: CCACGAGGTTTGCTGGGTCCAAGGGGAACTCCAGGA...AAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR CCA 90 bp TCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGATGGCCCAGGCTCCCCTTaGGGACCCATGTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SRNLTVEIREKDMCLIIDGPGSP*GPMFPF
Trigger: AAAAGGGAACATGGGTCCCCAAGGGGAGCCTGGGCC...ATCTATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGACCAATTGGACCTTGTaGACCAGGAAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMTNWTL*TRKTLR
Trigger: CCTCAGGGTCTTCCTGGTCCACAAGGTCCAATTGGT...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGAAGTCCAGCAAGTCCTaGTTTTCCTTGTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWKSSKS*FSLWSF
Trigger: AAAGGACCACAAGGAAAACCAGGACTTGCTGGACTT...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAAGTCCAGCAAGTCCTaGTTTTCCTTGTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQKSSKS*FSLWSF
Trigger: AAAGGACCACAAGGAAAACCAGGACTTGCTGGACTT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGCCATCTTCCCCTCTTaGGCCAATTTGACCAACTTC +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFAIFPS*ANLTNF
Trigger: GAAGTTGGTCAAATTGGCCCAAGAGGGGAAGATGGC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGCCATCTTCCCCTCTTaGGCCAATTTGACCAACTTC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITAIFPS*ANLTNF
Trigger: GAAGTTGGTCAAATTGGCCCAAGAGGGGAAGATGGC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAACCTGGGTCTCCAGTTaGGCCTGCTCGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKTWVSS*ACSTFG
Trigger: CCCAAAGGTCGAGCAGGCCCAACTGGAGACCCAGGT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGCCCAGGTTTCCCAGTaGGACCTCTTGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAAQVSQ*DLLHLL
Trigger: CAAGAGGTGCAAGAGGTCCCACTGGGAAACCTGGGC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTCCAGGGAATCCAACTaGACCCTGAGGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTISRESN*TLRSLR
Trigger: CCTCAAGGACCTCAGGGTCCAGTTGGATTCCCTGGA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAGGGAATCCAACTaGACCCTGAGGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSRESN*TLRSLR
Trigger: CCTCAAGGACCTCAGGGTCCAGTTGGATTCCCTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTCCAGGAGGGCCTTTTaGTCCAGGGAATCCAACTGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLSRRAF*SRESNW
Trigger: CCAGTTGGATTCCCTGGACCAAAAGGCCCTCCTGGA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAGGAGGGCCTTTTaGTCCAGGGAATCCAACTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSRRAF*SRESNW
Trigger: CCAGTTGGATTCCCTGGACCAAAAGGCCCTCCTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATCCAGGGGCACCAACTaGTCCTTGAAGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKSRGTN*SLKTWG
Trigger: CCCCCAGGTCTTCAAGGACCAGTTGGTGCCCCTGGA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTTCCAGGGGCACCAACTaGTCCTTGAAGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPSRGTN*SLKTWG
Trigger: CCCCCAGGTCTTCAAGGACCAGTTGGTGCCCCTGGA...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTGTCCTCTAGGACCTaGTTCACCATCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTILSSRT*FTITSS
Trigger: GCTGGAGGTGATGGTGAACCAGGTCCTAGAGGACAG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTGTCCTCTAGGACCTaGTTCACCATCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLSSRT*FTITSS
Trigger: GCTGGAGGTGATGGTGAACCAGGTCCTAGAGGACAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTCACCAGGTGGGCCTaGCAGACCCTGAAGACCTAT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICFTRWA*QTLKTY
Trigger: ATAGGTCTTCAGGGTCTGCCAGGCCCACCTGGTGAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACACCTTTTTCACCAGGTaGGCCTGGCAGACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYTFFTR*AWQTLK
Trigger: CTTCAGGGTCTGCCAGGCCCACCTGGTGAAAAAGGT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCTTTTTCACCAGGTaGGCCTGGCAGACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTFFTR*AWQTLK
Trigger: CTTCAGGGTCTGCCAGGCCCACCTGGTGAAAAAGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGACCAGGTGGCCCCATaGGACCAACATCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICDQVAP*DQHPHF
Trigger: AAAATGGGGATGTTGGTCCCATGGGGCCACCTGGTC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGTCCATCAGCTCCATTaGGACCTTGAGGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICVHQLH*DLEGLL
Trigger: CAAGAGGCCCTCAAGGTCCCAATGGAGCTGATGGAC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTTCCCCTTGTTCTCCTaGAGGACCAATCAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLFPLFS*RTNQAN
Trigger: ATTGGCCTGATTGGTCCTCCAGGAGAACAAGGGGAA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGACCCAGGAGGCCCTaGAAGACCACTGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRPRRP*KTTVTF
Trigger: AAAGGTGACAGTGGTCTTCCAGGGCCTCCTGGGTCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAATGACTTCACCAGGTaGACCTGGAGACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICNDFTR*TWRPRR
Trigger: CCTCCTGGGTCTCCAGGTCCACCTGGTGAAGTCATT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACAATGACTTCACCAGGTaGACCTGGAGACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYNDFTR*TWRPRR
Trigger: CCTCCTGGGTCTCCAGGTCCACCTGGTGAAGTCATT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGCATGTGGCACAAAATaGGTTGGTGGCACCAAGGTA +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITACGTK*VGGTKV
Trigger: TACCTTGGTGCCACCAACCCATTTTGTGCCACATGC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGCATGTGGCACAAAATaGGTTGGTGGCACCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFACGTK*VGGTKV
Trigger: TACCTTGGTGCCACCAACCCATTTTGTGCCACATGC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGCCCTGCCTTCAGAATaGAGGCAGATGAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKALPSE*RQMRGF
Trigger: GAAGCCCCTCATCTGCCTTCATTCTGAAGGCAGGGC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGCCCTGCCTTCAGAATaGAGGCAGATGAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIIALPSE*RQMRGF
Trigger: GAAGCCCCTCATCTGCCTTCATTCTGAAGGCAGGGC...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp ACTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAACCGCACTCACAACTGTaGACTCAACCCACGAAATTG +
Preference number: 4 (lower is better)
Translates to: TTGDKILLKESHSGDQGKPHSQL*TQPTKL
Trigger: CAATTTCGTGGGTTGAGTTCACAGTTGTGAGTGCGG...TTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACGAGGGTTGTTACGGTaGAATCCCAGAGCCACCGTT +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVARGLLR*NPRATV
Trigger: AACGGTGGCTCTGGGATTTCACCGTAACAACCCTCG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp CTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAATTTTCTTCTCCACGCTaGTTGCTACCCGATGCCACT +
Preference number: 4 (lower is better)
Translates to: LQGTKYYSRNLTVEIREKFSSPR*LLPDAT
Trigger: AGTGGCATCGGGTAGCAATCAGCGTGGAGAAGAAAA...TTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTACCTCGTTCACCCCTGTaGCCTTTGTCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLPRSPL*PLSPGR
Trigger: TCTGCCAGGTGACAAAGGTCACAGGGGTGAACGAGG...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGGACCAGGAAGACCCTaGGGTCCTGGATTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIIGPGRP*GPGFPC
Trigger: ACAAGGGAATCCAGGACCTCAGGGTCTTCCTGGTCC...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp AAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTGGACCAGGAAGACCCTaGGGTCCTGGATTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KILLKESHSGDQGKRHVFGPGRP*GPGFPC
Trigger: ACAAGGGAATCCAGGACCTCAGGGTCTTCCTGGTCC...AAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGACCAACAGGACCTTaGACTCCATCTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRPTGP*TPSLPA
Trigger: TGCAGGGAGAGATGGAGTTCAAGGTCCTGTTGGTCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAGCCAGGGTCACCTTTaGGACCAGGTAAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKSQGHL*DQVSQE
Trigger: CTCCTGGCTTACCTGGTCTCAAAGGTGACCCTGGCT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTTACCCTTTGGGCCTTaGGGACCTGGTAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLLPFGP*GPGKPG
Trigger: TCCAGGTTTACCAGGTCCTCAAGGCCCAAAGGGTAA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTACCCTTTGGGCCTTaGGGACCTGGTAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLPFGP*GPGKPG
Trigger: TCCAGGTTTACCAGGTCCTCAAGGCCCAAAGGGTAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCCAGATTTTTGCCCTCTaGGAATTTTGTTGGCGACAT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVQIFAL*EFCWRH
Trigger: ATGTCGCCAACAAAATTCTCAGAGGGCAAAAATCTG...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGATCCAGTGGAACCAATaGCATCTGAAATCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWIQWNQ*HLKSFG
Trigger: TCCAAAGGATTTCAGATGTCATTGGTTCCACTGGAT...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATCCTCTGCCGGGCCCTaGCTTCAGAATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKSSAGP*LQNEGR
Trigger: TCTGCCTTCATTCTGAAGGCAGGGCCCGGCAGAGGA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp ATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTCCTCTGCCGGGCCCTaGCTTCAGAATGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ILLKESHSGDQGKRHVFNSSAGP*LQNEGR
Trigger: TCTGCCTTCATTCTGAAGGCAGGGCCCGGCAGAGGA...ATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCATCGCCAGGGATGTTTaGTACACAGCCATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIIARDV*YTAIGE
Trigger: CTCCCCAATGGCTGTGTAGCAAACATCCCTGGCGAT...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTATCGCCAGGGATGTTTaGTACACAGCCATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICIARDV*YTAIGE
Trigger: CTCCCCAATGGCTGTGTAGCAAACATCCCTGGCGAT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR GCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGAAGAGGAAGGTCAATaGGAGGGTTGTTACGGTGAA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFEEEGQ*EGCYGE
Trigger: TTCACCGTAACAACCCTCGCATTGACCTTCCTCTTC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTACTTCTCCACGCTGATTaGTACCCGATGCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: FHVDSRLIPYVLSYLDILLLHAD*YPMPLP
Trigger: GGGAAGTGGCATCGGGTAGCAATCAGCGTGGAGAAG...TAAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR GCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCCTCACAGTAGTCATATaGTGCCTTGGGATCACCTGT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFLTVVI*CLGITC
Trigger: ACAGGTGATCCCAAGGCAGCATATGACTACTGTGAG...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATTTGTCCCAGAAACATaGCTAGGAGCTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITFVPET*LGASVW
Trigger: CCAGACAGAAGCTCCTAGGCATGTTTCTGGGACAAA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCAGGCTCAACCACTaGTGGTTCTCCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTRLNH*WFSFLS
Trigger: GGACAGAAAGGAGAACCAGCAGTGGTTGAGCCTGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTCCTCTTCCTCCATCTaGACCTGGACGACCCCTTTT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTISSSSI*TWTTPF
Trigger: AAAAGGGGTCGTCCAGGTGCAGATGGAGGAAGAGGA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCTCTTCCTCCATCTaGACCTGGACGACCCCTTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSSSSI*TWTTPF
Trigger: AAAAGGGGTCGTCCAGGTGCAGATGGAGGAAGAGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp GACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTCCTCTTCCTCCATCTaGACCTGGACGACCCCTTTT +
Preference number: 4 (lower is better)
Translates to: DKILLKESHSGDQGKRHVSSSSI*TWTTPF
Trigger: AAAAGGGGTCGTCCAGGTGCAGATGGAGGAAGAGGA...CACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCCTCGATCTCCCTTTaGCCCAGGTTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPSISL*PRFSWH
Trigger: ATGCCAGGAGAACCTGGGGCAAAGGGAGATCGAGGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGATCCCTCGATCTCCCTTTaGCCCAGGTTCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SRNLTVEIREKDMCLIIDPSISL*PRFSWH
Trigger: ATGCCAGGAGAACCTGGGGCAAAGGGAGATCGAGGG...ATCTATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGCCAGCTACTCCCCGTaGACCTTTCTCTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKASYSP*TFLSIG
Trigger: GCCAATGGAGAGAAAGGTGCACGGGGAGTAGCTGGC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACAGGAGGGCCGGTCTTaGCTTGAAATCCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKQEGRS*LEIQSP
Trigger: GGGAGACTGGATTTCAAGGCAAGACCGGCCCTCCTG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGGACCTTCTGCACCTaGTTCCCCCTTAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRTFCT*FPLSTF
Trigger: AAAGGTGCTAAGGGGGAAGCAGGTGCAGAAGGTCCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACTGCATCTGCTTGCATaGCTTCAGTATGTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITLHLLA*LQYVFS
Trigger: CGAGAAGACATACTGAAGGCATGCAAGCAGATGCAG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCTCATCTGCATCTGCTTaGATGCCTTCAGTATGTCTT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVSSASA*MPSVCL
Trigger: AAGACATACTGAAGGCATGCAAGCAGATGCAGATGA...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGAATTCAGGGACACGTaGAAGTTTTGGAAATGGACA +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQEFRDT*KFWKWT
Trigger: TGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAGCCTCTTTATACTCTaGTTCCCCATACTCATAGTC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQSLFIL*FPILIV
Trigger: GACTATGAGTATGGGGAAGCAGAGTATAAAGAGGCT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGAGGGGATAGTCTTCTaGGGCAGGTTTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYEGIVF*GRFSSV
Trigger: CACACTGGAAAACCTGCCCCAGAAGACTATCCCCTC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGAGGGGATAGTCTTCTaGGGCAGGTTTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICEGIVF*GRFSSV
Trigger: CACACTGGAAAACCTGCCCCAGAAGACTATCCCCTC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGAGCTTGAGCAGCCTTaGGTGCTGAAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICELEQP*VLKSHS
Trigger: ACTGTGACTCTTCAGCACCCAAGGCTGCTCAAGCTC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAGGCTCAACCACTGCTaGTTCTCCTTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITRLNHC*FSFLSF
Trigger: AAAGGACAGAAAGGAGAACCAGCAGTGGTTGAGCCT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp ACTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAACTGAGCAGAGATGGTTaGTCCTTTGGAACCATCACC +
Preference number: 4 (lower is better)
Translates to: TTGDKILLKESHSGDQGKLSRDG*SFGTIT
Trigger: GGTGATGGTTCCAAAGGACCAACCATCTCTGCTCAG...TTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGCTGAGCAGAGATGGTTaGTCCTTTGGAACCATCACC +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMLSRDG*SFGTIT
Trigger: GGTGATGGTTCCAAAGGACCAACCATCTCTGCTCAG...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCCTTCCTGAGCAGAGATaGTTGGTCCTTTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFLPEQR*LVLWNH
Trigger: ATGGTTCCAAAGGACCAACCATCTCTGCTCAGGAAG...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTCACCACTCTCACCTTTaGCCCCAGATGAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: KILLKESHSGDQGKRHVFHHSHL*PQMNQA
Trigger: GGCCTGGTTCATCTGGGGCCAAAGGTGAGAGTGGTG...AAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTTCCTCCATCTGCACCTaGACGACCCCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FPCRLQINSLCAELSRYLSSICT*TTPFSR
Trigger: CCTGGAAAAAGGGGTCGTCCAGGTGCAGATGGAGGA...AAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTGGGCCAGCTTCACCTaGAAGACCTCTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLWASFT*KTSWSN
Trigger: ATTGGACCAAGAGGTCTTCCAGGTGAAGCTGGCCCA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTGGGCCAGCTTCACCTaGAAGACCTCTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICWASFT*KTSWSN
Trigger: ATTGGACCAAGAGGTCTTCCAGGTGAAGCTGGCCCA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTACCCAGCAAACCTCGTaGGCCAGCTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPTQQTS*ASFTWK
Trigger: CTTCCAGGTGAAGCTGGCCCACGAGGTTTGCTGGGT...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp TCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGATACCCAGCAAACCTCGTaGGCCAGCTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SRNLTVEIREKDMCLIIDTQQTS*ASFTWK
Trigger: CTTCCAGGTGAAGCTGGCCCACGAGGTTTGCTGGGT...ATCTATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATCCTGGAGTTCCCCTTaGACCCAGCAAACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKSWSSP*TQQTSW
Trigger: CCACGAGGTTTGCTGGGTCCAAGGGGAACTCCAGGA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGTTCCCTTTTGGTCCTaGGGGGCCATCTACACCTGC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKVPFWS*GAIYTC
Trigger: GCAGGTGTAGATGGCCCCCCAGGACCAAAAGGGAAC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAGTTCCCTTTTGGTCCTaGGGGGCCATCTACACCTGC +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLVPFWS*GAIYTC
Trigger: GCAGGTGTAGATGGCCCCCCAGGACCAAAAGGGAAC...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAAGACCCTGAGGTCCTaGATTCCCTTGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICKTLRS*IPLLTW
Trigger: CCAGGTCAACAAGGGAATCCAGGACCTCAGGGTCTT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCAATTGGACCTTGTaGACCAGGAAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTNWTL*TRKTLR
Trigger: CCTCAGGGTCTTCCTGGTCCACAAGGTCCAATTGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGACCAGGAGGACCAATTaGACCTTGTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLTRRTN*TLWTRK
Trigger: CTTCCTGGTCCACAAGGTCCAATTGGTCCTCCTGGT...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCAGGAGGACCAATTaGACCTTGTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTRRTN*TLWTRK
Trigger: CTTCCTGGTCCACAAGGTCCAATTGGTCCTCCTGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCACCAGGAGGACCAATTaGACCTTGTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTITRRTN*TLWTRK
Trigger: CTTCCTGGTCCACAAGGTCCAATTGGTCCTCCTGGT...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATCCAGTGGAACCCTTTaGACCTTGTCTTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSSGTL*TLSSWI
Trigger: TATCCAGGAAGACAAGGTCCAAAGGGTTCCACTGGA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCCAGGGAATCCAGTaGAACCCTTTGGACCTTGTC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTQGIQ*NPLDLV
Trigger: GACAAGGTCCAAAGGGTTCCACTGGATTCCCTGGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACACCCAGGGAATCCAGTaGAACCCTTTGGACCTTGTC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYTQGIQ*NPLDLV
Trigger: GACAAGGTCCAAAGGGTTCCACTGGATTCCCTGGGT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAACCTTTTTCACCAGGTaGGCCTGGCAGACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVATFFTR*AWQTLK
Trigger: CTTCAGGGTCTGCCAGGCCCACCTGGTGAAAAAGGT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTCCTCTTTCTCCTTTaGGACCGCCTACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLLFLL*DRLHLL
Trigger: AAGCAGGTGTAGGCGGTCCCAAAGGAGAAAGAGGAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATCCCATAGGACCAGGTaGTCCATCTTGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKSHRTR*SILACS
Trigger: GCTGCAGGCCAAGATGGACCACCTGGTCCTATGGGA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCACTGTCACCTTTCTaGCCAGCGGGTCCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPLSPF*PAGPVE
Trigger: CTCTACTGGACCCGCTGGCCAGAAAGGTGACAGTGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAAGACCCAGGAGGCCCTaGAAGACCACTGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVARPRRP*KTTVTF
Trigger: AAAGGTGACAGTGGTCTTCCAGGGCCTCCTGGGTCT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAAGTTCGGGCTGGATTaGTCTGAGTACCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITKFGLD*SEYPLE
Trigger: TTCCAATGGGTACTCAGACCAATCCAGCCCGAACTT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCAAGTTCGGGCTGGATTaGTCTGAGTACCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFKFGLD*SEYPLE
Trigger: TTCCAATGGGTACTCAGACCAATCCAGCCCGAACTT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACCAATATTCACCATCTaGGAAGTCAGGATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITPIFTI*EVRMAE
Trigger: CTCAGCCATCCTGACTTCCCAGATGGTGAATATTGG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTGGCACAAAATGGGTTaGTGGCACCAAGGTATATTT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQWHKMG*WHQGIF
Trigger: AAATATACCTTGGTGCCACCAACCCATTTTGTGCCA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCTTCAAAACTTGCATGTaGCACAAAATGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVFKTCM*HKMGWW
Trigger: CCACCAACCCATTTTGTGCCACATGCAAGTTTTGAA...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGAGGAGAGTTGAGAATTaGGAATCAAGAATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQRRVEN*ESRISP
Trigger: AGGGCTGATTCTTGATTCCCAATTCTCAACTCTCCT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCCGCACTCACAACTGTaGACTCAACCCACGAAATTG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIPHSQL*TQPTKL
Trigger: CAATTTCGTGGGTTGAGTTCACAGTTGTGAGTGCGG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCGCACTCACAACTGTaGACTCAACCCACGAAATTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPHSQL*TQPTKL
Trigger: CAATTTCGTGGGTTGAGTTCACAGTTGTGAGTGCGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR TCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATACGAGGGTTGTTACGGTaGAATCCCAGAGCCACCGTT +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIIRGLLR*NPRATV
Trigger: AACGGTGGCTCTGGGATTTCACCGTAACAACCCTCG...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTACGAGGGTTGTTACGGTaGAATCCCAGAGCCACCGTT +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLRGLLR*NPRATV
Trigger: AACGGTGGCTCTGGGATTTCACCGTAACAACCCTCG...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGCCCTCTGGAGAATTGTaGAAATCTAGTGCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWPSGEL*KSSAFS
Trigger: ACTAAAAGCACTAGATTTTCACAATTCTCCAGAGGG...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCGTTTTGTTGGGGCACTaGGTTGTGCTTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFVLLGH*VVLALK
Trigger: TTTCAAAGCAAGCACAACTCAGTGCCCCAACAAAAC...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACTTTTCTTCTCCACGCTaGTTGCTACCCGATGCCACT +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYFSSPR*LLPDAT
Trigger: AGTGGCATCGGGTAGCAATCAGCGTGGAGAAGAAAA...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTTTCTTCTCCACGCTaGTTGCTACCCGATGCCACT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICFSSPR*LLPDAT
Trigger: AGTGGCATCGGGTAGCAATCAGCGTGGAGAAGAAAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCCTCTTGGGCCAATTTaGCCAACTTCTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIPLGPI*PTSPLS
Trigger: TGACAGAGGAGAAGTTGGTCAAATTGGCCCAAGAGG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCTCTTGGGCCAATTTaGCCAACTTCTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPLGPI*PTSPLS
Trigger: TGACAGAGGAGAAGTTGGTCAAATTGGCCCAAGAGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATTCTCCTGCTTGACCTaGAGGACCTGGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKFSCLT*RTWVSS
Trigger: ACTGGAGACCCAGGTCCTTCAGGTCAAGCAGGAGAA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTGGTAAAGGCTGAATaGCTTCACCAGGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLVKAE*LHQVDL
Trigger: CAGGTCCACCTGGTGAAGTCATTCAGCCTTTACCAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCGGGCTGGATTGGTCTaGGTACCCATTGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRAGLV*VPIGNF
Trigger: GAAATTTCCAATGGGTACTCAGACCAATCCAGCCCG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGGAAGTCAGGATGGCTaGGTTGCAGGTCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICGSQDG*VAGLYK
Trigger: CTTGTAAAGACCTGCAACTCAGCCATCCTGACTTCC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGATGACAGTGGTAGGTaGAATTTTGCCGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICDDSGR*NFAEQR
Trigger: CCTCTGCTCGGCAAAATTTCACCTACCACTGTCATC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTATCATACCAGGCTGCTaGCTGATGACAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICIIPGC*LMTVVG
Trigger: ACCTACCACTGTCATCAGTCAGCAGCCTGGTATGAT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCATCATACCAGGCTGCTaGCTGATGACAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIIIPGC*LMTVVG
Trigger: ACCTACCACTGTCATCAGTCAGCAGCCTGGTATGAT...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTCCTCATCATTTaGTCCCAGGAAGCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYHLLII*SQEAKC
Trigger: GCACTTCGCTTCCTGGGATCAAATGATGAGGAGATG...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCATCTCCTCATCATTTaGTCCCAGGAAGCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICHLLII*SQEAKC
Trigger: GCACTTCGCTTCCTGGGATCAAATGATGAGGAGATG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAAAGCTTTTGCCATGTaGTTCTGCCCCCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICKAFAM*FCPHKG
Trigger: GCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTTT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTAATCGCCAGGGATGTTTaGTACACAGCCATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FHVDSRLIPYVLSYLDILIARDV*YTAIGE
Trigger: CTCCCCAATGGCTGTGTAGCAAACATCCCTGGCGAT...TAAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTCAACCCACGAAATTaGGACTGCAGACCAACTTCG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLNPRN*DCRPTS
Trigger: CGAAGTTGGTCTGCAGTCGCAATTTCGTGGGTTGAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTCTCCACGCTGATTaGTACCCGATGCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKLLHAD*YPMPLP
Trigger: GGGAAGTGGCATCGGGTAGCAATCAGCGTGGAGAAG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp ATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATCTTCTCCACGCTGATTaGTACCCGATGCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: ILLKESHSGDQGKRHVFNLLHAD*YPMPLP
Trigger: GGGAAGTGGCATCGGGTAGCAATCAGCGTGGAGAAG...ATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTTTGTCCCAGAAACATaGCTAGGAGCTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMFVPET*LGASVW
Trigger: CCAGACAGAAGCTCCTAGGCATGTTTCTGGGACAAA...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTGTAATATCAGTTTCTaGTGGTACACCTGGACCAAA +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQCNISF*WYTWTK
Trigger: TTTGGTCCAGGTGTACCAGCAGAAACTGATATTACA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTGTAATATCAGTTTCTaGTGGTACACCTGGACCAAA +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWCNISF*WYTWTK
Trigger: TTTGGTCCAGGTGTACCAGCAGAAACTGATATTACA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAACCAGGCTCAACCACTaGTGGTTCTCCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVATRLNH*WFSFLS
Trigger: GGACAGAAAGGAGAACCAGCAGTGGTTGAGCCTGGT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAGGACCCATAATACCTaGAGGTCCTGCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKRTHNT*RSCWSW
Trigger: CCAGGACCAGCAGGACCTGCAGGTATTATGGGTCCT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGGACCCATAATACCTaGAGGTCCTGCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLKESHSGDQGKRHVFNYRTHNT*RSCWSW
Trigger: CCAGGACCAGCAGGACCTGCAGGTATTATGGGTCCT...ATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp AAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAGGACCCATAATACCTaGAGGTCCTGCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KILLKESHSGDQGKRHVFRTHNT*RSCWSW
Trigger: CCAGGACCAGCAGGACCTGCAGGTATTATGGGTCCT...AAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTGCACCTTCTTTTCCTaGAGCACCAGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICCTFFS*STRKTL
Trigger: CAAGGTCTTCCTGGTGCTGCAGGAAAAGAAGGTGCA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTGCACCTTCTTTTCCTaGAGCACCAGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTICTFFS*STRKTL
Trigger: CAAGGTCTTCCTGGTGCTGCAGGAAAAGAAGGTGCA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTACCTGGATCACCCTTTaGACCTTCTTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICTWITL*TFFSCS
Trigger: GCTGCAGGAAAAGAAGGTGCAAAGGGTGATCCAGGT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACCTTGTCACCCTTGCTaGCTTTTTGTCCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKPCHPC*LFVPAH
Trigger: GTGAGCCGGGACAAAAAGGCAGCAAGGGTGACAAGG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTCCCTTGTCACCCTTaGTGCCTTTTTGTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKLPCHP*CLFVPA
Trigger: AGCCGGGACAAAAAGGCAGCAAGGGTGACAAGGGAG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCCTCATCACCTTTTTaGCCAAACATCCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPSSPF*PNIPCC
Trigger: ACAGCAGGGGATGTTTGGGCAAAAAGGTGATGAGGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCCCTCATCACCTTTTTaGCCAAACATCCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYPSSPF*PNIPCC
Trigger: ACAGCAGGGGATGTTTGGGCAAAAAGGTGATGAGGG...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAAGGACCTTCTGCACCTaGTTCCCCCTTAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVARTFCT*FPLSTF
Trigger: AAAGGTGCTAAGGGGGAAGCAGGTGCAGAAGGTCCT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGGCAGGTTTTCCAGTGTaGTCTTCAAACAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQAGFPV*SSNRKT
Trigger: TGTTTTTCTGTTTGAAGACCACACTGGAAAACCTGC...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGAGGGGATAGTCTTCTaGGGCAGGTTTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAEGIVF*GRFSSV
Trigger: CACACTGGAAAACCTGCCCCAGAAGACTATCCCCTC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTGAGGGGATAGTCTTCTaGGGCAGGTTTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FPCRLQINSLCAELSRYLEGIVF*GRFSSV
Trigger: CACACTGGAAAACCTGCCCCAGAAGACTATCCCCTC...AAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTTCTTCAACTGGATTTaGCTCATTTGTCCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWFFNWI*LICPRN
Trigger: GTTTCTGGGACAAATGAGCCAAATCCAGTTGAAGAA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCTCTCCATATGCACCATaGCCATTTATGCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVSPYAP*PFMLVS
Trigger: AGAAACAAGCATAAATGGCCATGGTGCATATGGAGA...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp ACTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGGCTCAACCACTGCTaGTTCTCCTTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TTGDKILLKESHSGDQGKRLNHC*FSFLSF
Trigger: AAAGGACAGAAAGGAGAACCAGCAGTGGTTGAGCCT...TTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTTCCTGCTGGTCCTGGTaGTCCTTCGACAAGCATACC +
Preference number: 4 (lower is better)
Translates to: KILLKESHSGDQGKRHVFSCWSW*SFDKHT
Trigger: GGTATGCTTGTCGAAGGACCACCAGGACCAGCAGGA...AAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTAGGTCCTGCTGGTCCTaGTGGTCCTTCGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPRSCWS*WSFDKH
Trigger: ATGCTTGTCGAAGGACCACCAGGACCAGCAGGACCT...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp AAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAGGTCCTGCTGGTCCTaGTGGTCCTTCGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: KILLKESHSGDQGKRHVFRSCWS*WSFDKH
Trigger: ATGCTTGTCGAAGGACCACCAGGACCAGCAGGACCT...AAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAAGGTCCTGCTGGTCCTaGTGGTCCTTCGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLRSCWS*WSFDKH
Trigger: ATGCTTGTCGAAGGACCACCAGGACCAGCAGGACCT...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTGAGCAGAGATGGTTaGTCCTTTGGAACCATCACC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLSRDG*SFGTIT
Trigger: GGTGATGGTTCCAAAGGACCAACCATCTCTGCTCAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp ACTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAACTTCCTGAGCAGAGATaGTTGGTCCTTTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: TTGDKILLKESHSGDQGKLPEQR*LVLWNH
Trigger: ATGGTTCCAAAGGACCAACCATCTCTGCTCAGGAAG...TTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGCTTCCTGAGCAGAGATaGTTGGTCCTTTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMLPEQR*LVLWNH
Trigger: ATGGTTCCAAAGGACCAACCATCTCTGCTCAGGAAG...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAGGGCCCTGAGGACCTaGATCACCACTCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKRALRT*ITTLTF
Trigger: AAAGGTGAGAGTGGTGATCCAGGTCCTCAGGGCCCT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAAGGGCCCTGAGGACCTaGATCACCACTCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIIRALRT*ITTLTF
Trigger: AAAGGTGAGAGTGGTGATCCAGGTCCTCAGGGCCCT...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAGGGCCCTGAGGACCTaGATCACCACTCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: KILLKESHSGDQGKRHVFRALRT*ITTLTF
Trigger: AAAGGTGAGAGTGGTGATCCAGGTCCTCAGGGCCCT...AAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTATCCTCCATCTGCACCTaGACGACCCCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLSSICT*TTPFSR
Trigger: CCTGGAAAAAGGGGTCGTCCAGGTGCAGATGGAGGA...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGTGACCTTTGTCACCTaGCAGACCCGGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKVTFVT*QTRKSI
Trigger: GATGGACTTCCGGGTCTGCCAGGTGACAAAGGTCAC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAGTGACCTTTGTCACCTaGCAGACCCGGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: KYYSRNLTVEIREKDMCLVTFVT*QTRKSI
Trigger: GATGGACTTCCGGGTCTGCCAGGTGACAAAGGTCAC...TAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATGGGCCAGCTTCACCTaGAAGACCTCTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAWASFT*KTSWSN
Trigger: ATTGGACCAAGAGGTCTTCCAGGTGAAGCTGGCCCA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTACCAATTGGACCTTGTaGACCAGGAAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FPCRLQINSLCAELSRYLTNWTL*TRKTLR
Trigger: CCTCAGGGTCTTCCTGGTCCACAAGGTCCAATTGGT...AAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGCCATCTTCCCCTCTTaGGCCAATTTGACCAACTTC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICAIFPS*ANLTNF
Trigger: GAAGTTGGTCAAATTGGCCCAAGAGGGGAAGATGGC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACGCCATCTTCCCCTCTTaGGCCAATTTGACCAACTTC +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYAIFPS*ANLTNF
Trigger: GAAGTTGGTCAAATTGGCCCAAGAGGGGAAGATGGC...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp ACATCTAAGTATGAAAGCAGTTTTCCCCTCTTAAATTCACTAAACCAACTTCCTTCCAGGGAATCCAACTaGACCCTGAGGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TSKYESSFPLLNSLNQLPSRESN*TLRSLR
Trigger: CCTCAAGGACCTCAGGGTCCAGTTGGATTCCCTGGA...AGGAAGTTGGTTTAGTGAATTTAAGAGGGGAAAACTGCTTTCATACTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGATACCTTGAGGACCTaGATCACCCTTTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLDTLRT*ITLCTF
Trigger: GAAGGTGCAAAGGGTGATCCAGGTCCTCAAGGTATC...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGATACCTTGAGGACCTaGATCACCCTTTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICDTLRT*ITLCTF
Trigger: GAAGGTGCAAAGGGTGATCCAGGTCCTCAAGGTATC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTGTCCTCTAGGACCTaGTTCACCATCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKLSSRT*FTITSS
Trigger: GCTGGAGGTGATGGTGAACCAGGTCCTAGAGGACAG...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACTCCTCTTTCTCCTTTaGGACCGCCTACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVALLFLL*DRLHLL
Trigger: AAGCAGGTGTAGGCGGTCCCAAAGGAGAAAGAGGAG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTTCCCCTTGTTCTCCTaGAGGACCAATCAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLFPLFS*RTNQAN
Trigger: ATTGGCCTGATTGGTCCTCCAGGAGAACAAGGGGAA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTCCCCTTGTTCTCCTaGAGGACCAATCAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICFPLFS*RTNQAN
Trigger: ATTGGCCTGATTGGTCCTCCAGGAGAACAAGGGGAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCATCCCCTTTTGCTCCTaGAGATCCTTGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIIPFCS*RSLSSR
Trigger: CCTGGAACTCAAGGATCTCCAGGAGCAAAAGGGGAT...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTATCCCCTTTTGCTCCTaGAGATCCTTGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICIPFCS*RSLSSR
Trigger: CCTGGAACTCAAGGATCTCCAGGAGCAAAAGGGGAT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATTTACAAGTTCGGGCTaGATTGGTCTGAGTACCCAT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITFTSSG*IGLSTH
Trigger: ATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTTAGTACATCCTGGATaGATGAGAATGAGCACCATA +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWLVHPG*MRMSTI
Trigger: TATGGTGCTCATTCTCATCCATCCAGGATGTACTAA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTGTTTTAGTACATCCTaGATGGATGAGAATGAGCAC +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWCFSTS*MDENEH
Trigger: GTGCTCATTCTCATCCATCCAGGATGTACTAAAACA...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTGTTTTAGTACATCCTaGATGGATGAGAATGAGCAC +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQCFSTS*MDENEH
Trigger: GTGCTCATTCTCATCCATCCAGGATGTACTAAAACA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
3UTR CAA 72 bp CTTTACAAGTTCGGGCTGGATTGGTCTGAGTACCCATaGGAAATTTCATATGCTCAATGTCTTGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LYKFGLDWSEYP*EISYAQCLVSG
Trigger: CCCTGAAACAAGACATTGAGCATATGAAATTTCCAATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR TCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTCTGTAAGCAGTATCTaGGCCTTTAGAATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQSVSSI*AFRILS
Trigger: AGAAAGAATTCTAAAGGCTCAGATACTGCTTACAGA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATTTTCTTCTCCACGCTaGTTGCTACCCGATGCCACT +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAFSSPR*LLPDAT
Trigger: AGTGGCATCGGGTAGCAATCAGCGTGGAGAAGAAAA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATTGGTAAAGGCTGAATaGCTTCACCAGGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVALVKAE*LHQVDL
Trigger: CAGGTCCACCTGGTGAAGTCATTCAGCCTTTACCAA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACGGGCTGGATTGGTCTaGGTACCCATTGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVARAGLV*VPIGNF
Trigger: GAAATTTCCAATGGGTACTCAGACCAATCCAGCCCG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGATTAACCTGCATTATTaGAGCACACTGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWINLHY*STLKTR
Trigger: CCTTGTTTTCAGTGTGCTTCAATAATGCAGGTTAAT...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCATTAACCTGCATTATTaGAGCACACTGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVINLHY*STLKTR
Trigger: CCTTGTTTTCAGTGTGCTTCAATAATGCAGGTTAAT...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp GTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTAACAAAACTTCCACCAACAAGCTaGGAGTACTGTGTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: VDSRLIPYVLSYLDILTKLPPTS*EYCVPL
Trigger: TAGGGGCACACAGTACTCTCAGCTTGTTGGTGGAAG...TTTTGTTAAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCCACGAAATTGCGACTaGAGACCAACTTCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIPRNCD*RPTSSF
Trigger: AAAGGACGAAGTTGGTCTGCAGTCGCAATTTCGTGG...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCCACGAAATTGCGACTaGAGACCAACTTCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLPRNCD*RPTSSF
Trigger: AAAGGACGAAGTTGGTCTGCAGTCGCAATTTCGTGG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCACGAAATTGCGACTaGAGACCAACTTCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPRNCD*RPTSSF
Trigger: AAAGGACGAAGTTGGTCTGCAGTCGCAATTTCGTGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR GCA 90 bp GACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGCCACGAAATTGCGACTaGAGACCAACTTCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: DKILLKESHSGDQGKRHVPRNCD*RPTSSF
Trigger: AAAGGACGAAGTTGGTCTGCAGTCGCAATTTCGTGG...CACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp ACTATATTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGACTCAACCCACGAAATTaGGACTGCAGACCAACTTCG +
Preference number: 4 (lower is better)
Translates to: TIFPCRLQINSLCAELSRLNPRN*DCRPTS
Trigger: CGAAGTTGGTCTGCAGTCGCAATTTCGTGGGTTGAG...TCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAATATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGAAGAGGAAGGTCAATaGGAGGGTTGTTACGGTGAA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICEEEGQ*EGCYGE
Trigger: TTCACCGTAACAACCCTCGCATTGACCTTCCTCTTC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR GCA 90 bp GACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGGAAGAGGAAGGTCAATaGGAGGGTTGTTACGGTGAA +
Preference number: 4 (lower is better)
Translates to: DKILLKESHSGDQGKRHVEEEGQ*EGCYGE
Trigger: TTCACCGTAACAACCCTCGCATTGACCTTCCTCTTC...CACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCTCACAGTAGTCATATaGTGCCTTGGGATCACCTGT +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLLTVVI*CLGITC
Trigger: ACAGGTGATCCCAAGGCAGCATATGACTACTGTGAG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTCACAGTAGTCATATaGTGCCTTGGGATCACCTGT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLTVVI*CLGITC
Trigger: ACAGGTGATCCCAAGGCAGCATATGACTACTGTGAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR GCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTTTGTCCCAGAAACATaGCTAGGAGCTTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLFVPET*LGASVW
Trigger: CCAGACAGAAGCTCCTAGGCATGTTTCTGGGACAAA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGGAAGATCAGAATCCCTaGCGTCTATTTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWEDQNP*RLFLCF
Trigger: AAAACAAAGAAATAGACGGCAGGGATTCTGATCTTC...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTAACAAAAACCAGGCTCAACCACTaGTGGTTCTCCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VDSRLIPYVLSYLDILTKTRLNH*WFSFLS
Trigger: GGACAGAAAGGAGAACCAGCAGTGGTTGAGCCTGGT...TTTTGTTAAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR GCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAACCAGGCTCAACCACTaGTGGTTCTCCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIITRLNH*WFSFLS
Trigger: GGACAGAAAGGAGAACCAGCAGTGGTTGAGCCTGGT...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTGCATCTGCTTGCATaGCTTCAGTATGTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLHLLA*LQYVFS
Trigger: CGAGAAGACATACTGAAGGCATGCAAGCAGATGCAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR GCA 90 bp AAGCTTTTGCCATGTGATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGAATGGTACCTGTATATaGAGCGTTGTTTTCTATACC +
Preference number: 4 (lower is better)
Translates to: KLLPCDSAPTKASVFPKWNGTCI*SVVFYT
Trigger: GGTATAGAAAACAACGCTGCATATACAGGTACCATT...CCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCAATGGTACCTGTATATaGAGCGTTGTTTTCTATACC +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVNGTCI*SVVFYT
Trigger: GGTATAGAAAACAACGCTGCATATACAGGTACCATT...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAGAATTCAGGGACACGTaGAAGTTTTGGAAATGGACA +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITEFRDT*KFWKWT
Trigger: TGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTC...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CTAAACCAACTTCCTGGTTTCTCCTTTGGCCATGATGAAATTCTTACTCCCTCAGAATTCAGGGACACGTaGAAGTTTTGGAAATGGACA +
Preference number: 4 (lower is better)
Translates to: LNQLPGFSFGHDEILTPSEFRDT*KFWKWT
Trigger: TGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTC...TGAGGGAGTAAGAATTTCATCATGGCCAAAGGAGAAACCAGGAAGTTGGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635193.1
CDS-3UTR GCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCGTTTGCCTCCGTCTGTaGTATTGTCTCCTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIVCLRL*YCLLSY
Trigger: GTAACTGAGGAGACAATAGCACAGACGGAGGCAAAC...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCATCATCAACGATGTTTaGCTCCGTCTGTGCTATTGT +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFIINDV*LRLCYC
Trigger: ACAATAGCACAGACGGAGGCAAACATCGTTGATGAT...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTGAGGGGATAGTCTTCTaGGGCAGGTTTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KILLKESHSGDQGKRHVFEGIVF*GRFSSV
Trigger: CACACTGGAAAACCTGCCCCAGAAGACTATCCCCTC...AAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp GTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTAACAAAAGAGCTTGAGCAGCCTTaGGTGCTGAAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: VDSRLIPYVLSYLDILTKELEQP*VLKSHS
Trigger: ACTGTGACTCTTCAGCACCCAAGGCTGCTCAAGCTC...TTTTGTTAAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR CCA 90 bp ATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATGAGCTTGAGCAGCCTTaGGTGCTGAAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: ILLKESHSGDQGKRHVFNELEQP*VLKSHS
Trigger: ACTGTGACTCTTCAGCACCCAAGGCTGCTCAAGCTC...ATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTTCTGCTGGTACACCTaGACCAAATTCTTCATTAGG +
Preference number: 4 (lower is better)
Translates to: PQRHRYFLNGTCICSVVFFCWYT*TKFFIR
Trigger: CCTAATGAAGAATTTGGTCCAGGTGTACCAGCAGAA...GAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCAGGCTCAACCACTGCTaGTTCTCCTTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIRLNHC*FSFLSF
Trigger: AAAGGACAGAAAGGAGAACCAGCAGTGGTTGAGCCT...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACAGGCTCAACCACTGCTaGTTCTCCTTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KASVFPKWYLYMQRCFLYRLNHC*FSFLSF
Trigger: AAAGGACAGAAAGGAGAACCAGCAGTGGTTGAGCCT...GTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAGGCTCAACCACTGCTaGTTCTCCTTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICRLNHC*FSFLSF
Trigger: AAAGGACAGAAAGGAGAACCAGCAGTGGTTGAGCCT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCTTCCTGAGCAGAGATaGTTGGTCCTTTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICLPEQR*LVLWNH
Trigger: ATGGTTCCAAAGGACCAACCATCTCTGCTCAGGAAG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAAGACCCTGAGGTCCTaGATTCCCTTGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKKTLRS*IPLLTW
Trigger: CCAGGTCAACAAGGGAATCCAGGACCTCAGGGTCTT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGATAAGACCCTGAGGTCCTaGATTCCCTTGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: SRNLTVEIREKDMCLIIDKTLRS*IPLLTW
Trigger: CCAGGTCAACAAGGGAATCCAGGACCTCAGGGTCTT...ATCTATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAAGACCCTGAGGTCCTaGATTCCCTTGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLKESHSGDQGKRHVFNYKTLRS*IPLLTW
Trigger: CCAGGTCAACAAGGGAATCCAGGACCTCAGGGTCTT...ATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAACCAATTGGACCTTGTaGACCAGGAAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKTNWTL*TRKTLR
Trigger: CCTCAGGGTCTTCCTGGTCCACAAGGTCCAATTGGT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGATACCAGGAGGACCAATTaGACCTTGTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SRNLTVEIREKDMCLIIDTRRTN*TLWTRK
Trigger: CTTCCTGGTCCACAAGGTCCAATTGGTCCTCCTGGT...ATCTATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp ATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATACCAGGAGGACCAATTaGACCTTGTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILLKESHSGDQGKRHVFNTRRTN*TLWTRK
Trigger: CTTCCTGGTCCACAAGGTCCAATTGGTCCTCCTGGT...ATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCTGGTTTTCCTTGTaGTCCTTTTTCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSWFSL*SFFTRR
Trigger: CCTCCTGGTGAAAAAGGACCACAAGGAAAACCAGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTCCAGTGGAACCCTTTaGACCTTGTCTTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICSSGTL*TLSSWI
Trigger: TATCCAGGAAGACAAGGTCCAAAGGGTTCCACTGGA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGATACCTTGAGGACCTaGATCACCCTTTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVADTLRT*ITLCTF
Trigger: GAAGGTGCAAAGGGTGATCCAGGTCCTCAAGGTATC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CAGCAAAATGACTGTCGGCAGAGAAGAGTTGATCAGAGTGTGCTTCCAAAAGTCGGTCTGAGTACCCATTaGAAATTTCATATGCTCAAT +
Preference number: 4 (lower is better)
Translates to: QQNDCRQRRVDQSVLPKVGLSTH*KFHMLN
Trigger: ATTGAGCATATGAAATTTCCAATGGGTACTCAGACC...GACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAAGTTCGGGCTGGATTaGTCTGAGTACCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICKFGLD*SEYPLE
Trigger: TTCCAATGGGTACTCAGACCAATCCAGCCCGAACTT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCAATATTCACCATCTaGGAAGTCAGGATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPIFTI*EVRMAE
Trigger: CTCAGCCATCCTGACTTCCCAGATGGTGAATATTGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACAAGGAGAGTTGAGAATTaGGAATCAAGAATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITRRVEN*ESRISP
Trigger: AGGGCTGATTCTTGATTCCCAATTCTCAACTCTCCT...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGTTCGATTATATCCTCTaGTGCATACTCATCTATCTG +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQFDYIL*CILIYL
Trigger: CAGATAGATGAGTATGCACCAGAGGATATAATCGAA...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CTACAGGGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAATCTCCTCAGTTACAGTaGGTCCCTCTGTTACACTTT +
Preference number: 4 (lower is better)
Translates to: LQGTKYYSRNLTVEIREKSPQLQ*VPLLHF
Trigger: AAAGTGTAACAGAGGGACCCACTGTAACTGAGGAGA...TTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCCCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
3UTR CAA 72 bp CTGAAATTCAGCAAAATGACTGTCGGCAGAGAAGAGTaGATCAGAGTGTGCTTCCAAAAGTCTTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: LKFSKMTVGREE*IRVCFQKSSRF
Trigger: AAATCTGGAAGACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAGTCATTTTGCTGAATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp AAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTCCGCACTCACAACTGTaGACTCAACCCACGAAATTG +
Preference number: 4 (lower is better)
Translates to: KILLKESHSGDQGKRHVFPHSQL*TQPTKL
Trigger: CAATTTCGTGGGTTGAGTTCACAGTTGTGAGTGCGG...AAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGTTTTGTTGGGGCACTaGGTTGTGCTTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLVLLGH*VVLALK
Trigger: TTTCAAAGCAAGCACAACTCAGTGCCCCAACAAAAC...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTGTTTTGTTGGGGCACTaGGTTGTGCTTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICVLLGH*VVLALK
Trigger: TTTCAAAGCAAGCACAACTCAGTGCCCCAACAAAAC...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATTTTCTTCTCCACGCTaGTTGCTACCCGATGCCACT +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKFSSPR*LLPDAT
Trigger: AGTGGCATCGGGTAGCAATCAGCGTGGAGAAGAAAA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATAGATTTTTCTTCTCCACGCTaGTTGCTACCCGATGCCACT +
Preference number: 4 (lower is better)
Translates to: SRNLTVEIREKDMCLIIDFSSPR*LLPDAT
Trigger: AGTGGCATCGGGTAGCAATCAGCGTGGAGAAGAAAA...ATCTATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGCCTTGGGATCACCTGTaGTCAAAAACTGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLPWDHL*SKTAEC
Trigger: ACATTCAGCAGTTTTTGATCACAGGTGATCCCAAGG...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR TCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTCCTTGGGATCACCTGTaGTCAAAAACTGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICPWDHL*SKTAEC
Trigger: ACATTCAGCAGTTTTTGATCACAGGTGATCCCAAGG...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
CDS-3UTR TCA 90 bp GACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGCCTTGGGATCACCTGTaGTCAAAAACTGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: DKILLKESHSGDQGKRHVPWDHL*SKTAEC
Trigger: ACATTCAGCAGTTTTTGATCACAGGTGATCCCAAGG...CACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATTGGTAAAGGCTGAATaGCTTCACCAGGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKLVKAE*LHQVDL
Trigger: CAGGTCCACCTGGTGAAGTCATTCAGCCTTTACCAA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGGAAGTCAGGATGGCTaGGTTGCAGGTCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKGSQDG*VAGLYK
Trigger: CTTGTAAAGACCTGCAACTCAGCCATCCTGACTTCC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGATGACAGTGGTAGGTaGAATTTTGCCGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKDDSGR*NFAEQR
Trigger: CCTCTGCTCGGCAAAATTTCACCTACCACTGTCATC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAATCATACCAGGCTGCTaGCTGATGACAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKIIPGC*LMTVVG
Trigger: ACCTACCACTGTCATCAGTCAGCAGCCTGGTATGAT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR TCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAAAAGCTTTTGCCATGTaGTTCTGCCCCCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKKAFAM*FCPHKG
Trigger: GCCTTTGTGGGGGCAGAATCACATGGCAAAAGCTTT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACACTAAATTTGATGGTTTaGGTTCTTCGTGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITLNLMV*VLRVSS
Trigger: GCTAGAGACACGAAGAACGCAAACCATCAAATTTAG...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGTGTTTAATTATACTCAACCCACGAAATTaGGACTGCAGACCAACTTCG +
Preference number: 4 (lower is better)
Translates to: YSRNLTVEIREKDMCLIILNPRN*DCRPTS
Trigger: CGAAGTTGGTCTGCAGTCGCAATTTCGTGGGTTGAG...TATAATTAAACACATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR GCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAGAAGAGGAAGGTCAATaGGAGGGTTGTTACGGTGAA +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAEEEGQ*EGCYGE
Trigger: TTCACCGTAACAACCCTCGCATTGACCTTCCTCTTC...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp ACTATATTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGAGAAGAGGAAGGTCAATaGGAGGGTTGTTACGGTGAA +
Preference number: 4 (lower is better)
Translates to: TIFPCRLQINSLCAELSREEEGQ*EGCYGE
Trigger: TTCACCGTAACAACCCTCGCATTGACCTTCCTCTTC...TCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAATATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR GCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTGTAATATCAGTTTCTaGTGGTACACCTGGACCAAA +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLCNISF*WYTWTK
Trigger: TTTGGTCCAGGTGTACCAGCAGAAACTGATATTACA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATGCACCTTCTTTTCCTaGAGCACCAGGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKCTFFS*STRKTL
Trigger: CAAGGTCTTCCTGGTGCTGCAGGAAAAGAAGGTGCA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR GCA 90 bp GATTCTGCCCCCACAAAGGCATCGGTATTTCCTAAATGGTACCTGTATATGCAGATACATATGATTGTTTaGTTGACGGAGGCATTGATT +
Preference number: 4 (lower is better)
Translates to: DSAPTKASVFPKWYLYMQIHMIV*LTEALI
Trigger: AATCAATGCCTCCGTCAAGCAAACAATCATATGTAT...CTGCATATACAGGTACCATTTAGGAAATACCGATGCCTTTGTGGGGGCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
CDS-3UTR GCA 90 bp TTTCCATGTCGACTCCAGATTAATTCCTTATGTGCTGAGCTATCTAGATATCTTGTTTGCCTCCGTCTGTaGTATTGTCTCCTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: FPCRLQINSLCAELSRYLVCLRL*YCLLSY
Trigger: GTAACTGAGGAGACAATAGCACAGACGGAGGCAAAC...AAGATATCTAGATAGCTCAGCACATAAGGAATTAATCTGGAGTCGACATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644186.1
CDS-3UTR GCA 90 bp GGGACAAAATATTACTCAAGGAATCTCACAGTGGAGATCAGGGAAAAAGACATGATCATCAACGATGTTTaGCTCCGTCTGTGCTATTGT +
Preference number: 4 (lower is better)
Translates to: GTKYYSRNLTVEIREKDMIINDV*LRLCYC
Trigger: ACAATAGCACAGACGGAGGCAAACATCGTTGATGAT...CATGTCTTTTTCCCTGATCTCCACTGTGAGATTCCTTGAGTAATATTTTGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644186.1
ENST00000647280.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATTCTTCAACTGGATTTaGCTCATTTGTCCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITFFNWI*LICPRN
Trigger: GTTTCTGGGACAAATGAGCCAAATCCAGTTGAAGAA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTCTCCATATGCACCATaGCCATTTATGCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLSPYAP*PFMLVS
Trigger: AGAAACAAGCATAAATGGCCATGGTGCATATGGAGA...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCACTTCCTGAGCAGAGATaGTTGGTCCTTTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVALPEQR*LVLWNH
Trigger: ATGGTTCCAAAGGACCAACCATCTCTGCTCAGGAAG...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCATCCTGGTTTTCCTTGTaGTCCTTTTTCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVASWFSL*SFFTRR
Trigger: CCTCCTGGTGAAAAAGGACCACAAGGAAAACCAGGA...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTAAGTCCAGCAAGTCCTaGTTTTCCTTGTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICKSSKS*FSLWSF
Trigger: AAAGGACCACAAGGAAAACCAGGACTTGCTGGACTT...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAATTCCCCTTGTTCTCCTaGAGGACCAATCAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKFPLFS*RTNQAN
Trigger: ATTGGCCTGATTGGTCCTCCAGGAGAACAAGGGGAA...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAATCCCCTTTTGCTCCTaGAGATCCTTGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKIPFCS*RSLSSR
Trigger: CCTGGAACTCAAGGATCTCCAGGAGCAAAAGGGGAT...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAACTTGCATGTGGCAAAGTTCGGGCTGGATTaGTCTGAGTACCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: CICSVVFYTILIQNLHVAKFGLD*SEYPLE
Trigger: TTCCAATGGGTACTCAGACCAATCCAGCCCGAACTT...TGCCACATGCAAGTTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp GCAATTCTCATAAAATTAGAGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGTTTACAAGTTCGGGCTaGATTGGTCTGAGTACCCAT +
Preference number: 4 (lower is better)
Translates to: AILIKLESDGIQGHVQVLFTSSG*IGLSTH
Trigger: ATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAA...CAAAACTTGCACGTGTCCCTGAATTCCATCTGACTCTAATTTTATGAGAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CATCGGTATTTCCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCTTTACAAGTTCGGGCTaGATTGGTCTGAGTACCCAT +
Preference number: 4 (lower is better)
Translates to: HRYFLNGTCICSVVFYTIFTSSG*IGLSTH
Trigger: ATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAA...GATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGGAAATACCGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGATATGTTTTACAAGTTCGGGCTaGATTGGTCTGAGTACCCAT +
Preference number: 4 (lower is better)
Translates to: WHKMGWWHQGIFSVDLICFTSSG*IGLSTH
Trigger: ATGGGTACTCAGACCAATCCAGCCCGAACTTGTAAA...ACATATCAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000512756.5
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGCACAAAATGGGTTGGTaGCACCAAGGTATATTTTCT +
Preference number: 4 (lower is better)
Translates to: CMWHKMGWWHQGIFSVDLHKMGW*HQGIFS
Trigger: AGAAAATATACCTTGGTGCCACCAACCCATTTTGTG...CAAATCAACAGAAAATATACCTTGGTGCCACCAACCCATTTTGTGCCACATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp CCTAAATGGTACCTGTATATGCAGCGTTGTTTTCTATACCATCCTTATTCAAAAGCATGTGGCACAAAATaGGTTGGTGGCACCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PKWYLYMQRCFLYHPYSKACGTK*VGGTKV
Trigger: TACCTTGGTGCCACCAACCCATTTTGTGCCACATGC...TTTTGAATAAGGATGGTATAGAAAACAACGCTGCATATACAGGTACCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp AGTCAGATGGAATTCAGGGACACGTGCAAGTTTTGGAAATGGACACAGATAACATCGGTATTTCCTAAATaGTACCTGTATATGCAGCGT +
Preference number: 4 (lower is better)
Translates to: SQMEFRDTCKFWKWTQITSVFPK*YLYMQR
Trigger: ACGCTGCATATACAGGTACCATTTAGGAAATACCGA...TGTTATCTGTGTCCATTTCCAAAACTTGCACGTGTCCCTGAATTCCATCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353414.8
ENST00000358392.6
ENST00000370096.9
ENST00000635193.1
CDS-3UTR CCA 90 bp TGCATGTGGCACAAAATGGGTTGGTGGCACCAAGGTATATTTTCTGTTGATTTGTGTTTTAGTACATCCTaGATGGATGAGAATGAGCAC