RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL10A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000123500

Ensembl transcript IDs: ENST00000243222.8, ENST00000327673.4, ENST00000418500.1, ENST00000452729.1, ENST00000651968.1

Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACATACGTTTTTACGTTaGTGCTCACTTTTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRHTFLR*CSLFRG
Trigger: CCCCCTGAAAAGTGAGCAGCAACGTAAAAACGTATG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGGGGGAAGGTTTGTTaGTCTGATAGCTCAAATCTG +
Preference number: 2 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRGKVC*SDSSNL
Trigger: CAGATTTGAGCTATCAGACCAACAAACCTTCCCCCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAATGCATTTTGTAGGGTaGGGTAGAGTTAGAGAATGC +
Preference number: 2 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRMHFVG*GRVREC
Trigger: GCATTCTCTAACTCTACCCCACCCTACAAAATGCAT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCATACGTTTTTACGTTaGTGCTCACTTTTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLHTFLR*CSLFRG
Trigger: CCCCCTGAAAAGTGAGCAGCAACGTAAAAACGTATG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGGGGGAAGGTTTGTTaGTCTGATAGCTCAAATCTG +
Preference number: 2 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRGKVC*SDSSNL
Trigger: CAGATTTGAGCTATCAGACCAACAAACCTTCCCCCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACCTGTTTCCAAGTTATaGTGGGTATATAAAAAGCTT +
Preference number: 2 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRPVSKL*WVYKKL
Trigger: AAGCTTTTTATATACCCAGCATAACTTGGAAACAGG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTATGCATTTTGTAGGGTaGGGTAGAGTTAGAGAATGC +
Preference number: 2 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLMHFVG*GRVREC
Trigger: GCATTCTCTAACTCTACCCCACCCTACAAAATGCAT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATTATATGATACCTCCTaGATGTTTCCTAGAAGTTCT +
Preference number: 2 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRLYDTS*MFPRSS
Trigger: AGAACTTCTAGGAAACATCCAGGAGGTATCATATAA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGTTTCCAAGTTATGCTaGGTATATAAAAAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRVSKLC*VYKKLL
Trigger: GAGAAGCTTTTTATATACCCAGCATAACTTGGAAAC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
3UTR-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTACATACGTTTTTACGTaGCTGCTCACTTTTCAGGGG +
Preference number: 3 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLTYVFT*LLTFQG
Trigger: CCCCTGAAAAGTGAGCAGCAACGTAAAAACGTATGT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGTCCTGTGGGACCCTaGGGGCCTGGAAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGPVGP*GPGRPL
Trigger: GAGGGGTCTTCCAGGCCCTCAGGGTCCCACAGGACC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGTGGCCTCTTGGACCTaGAGGCCCTGGTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRVASWT*RPWWPG
Trigger: ACCGGGCCACCAGGGCCTCCAGGTCCAAGAGGCCAC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACCAGAAGGACCTGGGTaGCCTCGAGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRPEGPG*PRGPAG
Trigger: CCCTGCTGGACCTCGAGGGCACCCAGGTCCTTCTGG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGCCCCAGGGTATCCTaGAGGCCCAGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSPRVS*RPSWPC
Trigger: ACAGGGCCAGCTGGGCCTGCAGGATACCCTGGGGCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAAAGCCCCTGGGTCCTaGGGCTCCTGTGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRKAPGS*GSCGSL
Trigger: CAGGGACCCACAGGAGCCCCAGGACCCAGGGGCTTT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGGACCCTGAGGGCCTaGAAGACCCCTCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGTLRA*KTPLTW
Trigger: CCAGGTGAGAGGGGTCTTCCAGGCCCTCAGGGTCCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAATCCCTGGCTGGCCTaGGGCTCCAGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRNPWLA*GSSSSW
Trigger: CCAGGAGCTGCTGGAGCCCCAGGCCAGCCAGGGATT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATCCCTTTGCTCCTGCTaGGCCCACAGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSLCSC*AHRAWE
Trigger: CTCCCAGGCCCTGTGGGCCCAGCAGGAGCAAAGGGA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATCAGGCATGACTGCTTaGCCTGGTGGGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSGMTA*PGGPGG
Trigger: GCCTCCAGGCCCACCAGGTCAAGCAGTCATGCCTGA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACATTCCCTTTGCTCCTaGTGGGCCCACAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRHSLCS*WAHRAW
Trigger: CCAGGCCCTGTGGGCCCAGCAGGAGCAAAGGGAATG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATGGTCCAGAAGGACCTaGGTGCCCTCGAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRWSRRT*VPSRSS
Trigger: GCTGGACCTCGAGGGCACCCAGGTCCTTCTGGACCA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGCCAGATGGTCCTGTaGGACCCTGAGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGQMVL*DPEGLE
Trigger: TTCCAGGCCCTCAGGGTCCCACAGGACCATCTGGCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATCCAGGAGGGCCAGATaGTCCTGTGGGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSRRAR*SCGTLR
Trigger: CCTCAGGGTCCCACAGGACCATCTGGCCCTCCTGGA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACCAGGCTCTCCAGAGTaGCCTCTTGGACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRPGSPE*PLGPGG
Trigger: GCCTCCAGGTCCAAGAGGCCACTCTGGAGAGCCTGG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACATGACTGCTTGACCTaGTGGGCCTGGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRHDCLT*WAWRPR
Trigger: CCTGGGCCTCCAGGCCCACCAGGTCAAGCAGTCATG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATGGTTTCCCTACAGCTaGTGGTCCCGGTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRWFPYS*WSRWSW
Trigger: CCAGGACCACCGGGACCATCAGCTGTAGGGAAACCA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAACCCTCAGGCATGACTaGTTGACCTGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRTLRHD*LTWWAW
Trigger: CCAGGCCCACCAGGTCAAGCAGTCATGCCTGAGGGT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATCCAGCAGGGCCTGGTaGACCAGGAGTACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSSRAW*TRSTLL
Trigger: GAGCAAGGTACTCCTGGTCCACCAGGCCCTGCTGGA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGGTCCAGCAGGGCCTaGTGGACCAGGAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRSSRA*WTRSTL
Trigger: CAAGGTACTCCTGGTCCACCAGGCCCTGCTGGACCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATGGTCCTGGCAACCCTaGCTCTCCTTGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRWSWQP*LSLESR
Trigger: CCTGGACTCCAAGGAGAGCCAGGGTTGCCAGGACCA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGGGCCTTGGGGACCTaGTGGGCCAATTGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRALGT*WANWSH
Trigger: ATGGGACCAATTGGCCCACCAGGTCCCCAAGGCCCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGGCCCAGCTATTCCTaGAGCCCCAGGGAGACCTTT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGPSYS*SPRETF
Trigger: AAAGGTCTCCCTGGGGCTCCAGGAATAGCTGGGCCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGGTCCAGTCAGACCTaGCTTCCCAGGAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGSSQT*LPRKTC
Trigger: GCAGGTCTTCCTGGGAAGCCAGGTCTGACTGGACCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGGCCTGGGAGACCATaGCTACCCGGGATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGPGRP*LPGMPF
Trigger: AAAAGGCATCCCGGGTAGCCATGGTCTCCCAGGCCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGATGATGGCACTCCCTaGAGCCTGATCCAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRDDGTP*SLIQVA
Trigger: GGCTACCTGGATCAGGCTTCAGGGAGTGCCATCATC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCCAGAAGGACCTGGGTaGCCTCGAGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLPEGPG*PRGPAG
Trigger: CCCTGCTGGACCTCGAGGGCACCCAGGTCCTTCTGG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACTCCTGGCTTTCCAATaGCTTCTGGCCCTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRLLAFQ*LLALVP
Trigger: GGGAACGAGGGCCAGAAGGCATTGGAAAGCCAGGAG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACATGGCTACCCGGGATaGCTTTTGGTCCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRHGYPG*LLVLGV
Trigger: GACCCCAAGGACCAAAAGGCATCCCGGGTAGCCATG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGCCTGGTTTTCCTGGTaGTCCAGAAGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRAWFSW*SRRTWV
Trigger: CACCCAGGTCCTTCTGGACCACCAGGAAAACCAGGC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACTCTCCTGGTTTTCCTaGGAGTCCTGGCACACCTGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRLSWFS*ESWHTW
Trigger: CCAGGTGTGCCAGGACTCCCAGGAAAACCAGGAGAG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAAAGCCCCTGGGTCCTaGGGCTCCTGTGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLKAPGS*GSCGSL
Trigger: CAGGGACCCACAGGAGCCCCAGGACCCAGGGGCTTT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGGACCCTGAGGGCCTaGAAGACCCCTCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGTLRA*KTPLTW
Trigger: CCAGGTGAGAGGGGTCTTCCAGGCCCTCAGGGTCCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGCCTTGGGGACCTGGTaGGCCAATTGGTCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRALGTW*ANWSHF
Trigger: GAAATGGGACCAATTGGCCCACCAGGTCCCCAAGGC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAATCCCTGGCTGGCCTaGGGCTCCAGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLNPWLA*GSSSSW
Trigger: CCAGGAGCTGCTGGAGCCCCAGGCCAGCCAGGGATT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTCCCTTTGCTCCTGCTaGGCCCACAGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLSLCSC*AHRAWE
Trigger: CTCCCAGGCCCTGTGGGCCCAGCAGGAGCAAAGGGA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGGACCGGGACTTCCTaGATCCCCTTTAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRTGTS*IPFRPR
Trigger: CCTGGGTCTAAAGGGGATCCAGGAAGTCCCGGTCCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTCAGGCATGACTGCTTaGCCTGGTGGGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLSGMTA*PGGPGG
Trigger: GCCTCCAGGCCCACCAGGTCAAGCAGTCATGCCTGA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCATTCCCTTTGCTCCTaGTGGGCCCACAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLHSLCS*WAHRAW
Trigger: CCAGGCCCTGTGGGCCCAGCAGGAGCAAAGGGAATG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAATTGAGGCCCTTAGTTaGTATGCCAGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRIEALS*YASWAR
Trigger: CCTGGCCCAGCTGGCATAGCAACTAAGGGCCTCAAT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGGAGTTCCTGGAGATaGTGCCTTGGCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGSSWR*CLGSFL
Trigger: CAGAAAGCTGCCAAGGCACCATCTCCAGGAACTCCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTGGTCCAGAAGGACCTaGGTGCCCTCGAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLWSRRT*VPSRSS
Trigger: GCTGGACCTCGAGGGCACCCAGGTCCTTCTGGACCA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACATACCAGGGACTCCTaGTGCACCCTTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRHTRDS*CTLFSR
Trigger: CCTGGAGAAAAGGGTGCACCAGGAGTCCCTGGTATG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAAGACCCCTCTCACCTaGACGACCAGGAGCACCATA +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRKTPLT*TTRSTI
Trigger: TATGGTGCTCCTGGTCGTCCAGGTGAGAGGGGTCTT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGCCAGATGGTCCTGTaGGACCCTGAGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGQMVL*DPEGLE
Trigger: TTCCAGGCCCTCAGGGTCCCACAGGACCATCTGGCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTCCAGGAGGGCCAGATaGTCCTGTGGGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLSRRAR*SCGTLR
Trigger: CCTCAGGGTCCCACAGGACCATCTGGCCCTCCTGGA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGAGACCTTTTGTTCCTaGAATCCCTGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRETFCS*NPWLAW
Trigger: CCAGGCCAGCCAGGGATTCCAGGAACAAAAGGTCTC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTTCCCCTTTGGCACCTaGACCCCCAGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLFPFGT*TPRKAS
Trigger: GCTGGCCTTCCTGGGGGTCCAGGTGCCAAAGGGGAA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGGGCCTCTAGTACCTaGTATTCCAGGGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRASST*YSRGTS
Trigger: AGAGGTGCCCCTGGAATACCAGGTACTAGAGGCCCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATCCTGGAATGCCTGGTaGCCCAATAGGGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSWNAW*PNRASS
Trigger: ACTAGAGGCCCTATTGGGCCACCAGGCATTCCAGGA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTCCAGAGTGGCCTCTTaGACCTGGAGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLSRVAS*TWRPWW
Trigger: CCACCAGGGCCTCCAGGTCCAAGAGGCCACTCTGGA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCCAGGCTCTCCAGAGTaGCCTCTTGGACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLPGSPE*PLGPGG
Trigger: GCCTCCAGGTCCAAGAGGCCACTCTGGAGAGCCTGG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCATGACTGCTTGACCTaGTGGGCCTGGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLHDCLT*WAWRPR
Trigger: CCTGGGCCTCCAGGCCCACCAGGTCAAGCAGTCATG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGGTCCCAGAAAGACTaGGCCTTTGGCCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGSQKD*AFGLPL
Trigger: TAAAGGCAGGCCAAAGGCCCAGTCTTTCTGGGACCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGGCCTACCCAAACATaGGTCCCTTTCACATGCACG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRPTQT*VPFTCT
Trigger: CGTGCATGTGAAAGGGACTCATGTTTGGGTAGGCCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACAGATGGATTCTGCGTaGTGGGAGTTCCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRQMDSA*WEFLEM
Trigger: CATCTCCAGGAACTCCCAGCACGCAGAATCCATCTG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAACCAGGGACTCCTGGTaGACCCTTTTCTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRTRDSW*TLFSRK
Trigger: TTTCCTGGAGAAAAGGGTGCACCAGGAGTCCCTGGT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAATGGATTCTGCGTGCTaGGAGTTCCTGGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRMDSAC*EFLEMV
Trigger: CACCATCTCCAGGAACTCCCAGCACGCAGAATCCAT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGGACTTCCGTAGCCTaGTTTTCCTGGTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRTSVA*FSWWSR
Trigger: TCTGGACCACCAGGAAAACCAGGCTACGGAAGTCCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTGGTCCTGGCAACCCTaGCTCTCCTTGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLWSWQP*LSLESR
Trigger: CCTGGACTCCAAGGAGAGCCAGGGTTGCCAGGACCA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATTTTCCTGGGAGTCCTaGCACACCTGGTTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRFSWES*HTWFPY
Trigger: GTAGGGAAACCAGGTGTGCCAGGACTCCCAGGAAAA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGTCCTGGGGCTCCTGTaGGTCCCTGTTGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLVLGLL*VPVVQV
Trigger: AACCTGGACAACAGGGACCCACAGGAGCCCCAGGAC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGATGCCTGGCTGTCCTaGAACCCCATTTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRDAWLS*NPIFTS
Trigger: AGAGGTGAAAATGGGGTTCCAGGACAGCCAGGCATC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAACCTGGTGGGCCAATTaGTCCCATTTCTCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRTWWAN*SHFSRK
Trigger: TTTCCGGGAGAAATGGGACCAATTGGCCCACCAGGT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGGGCCTTGGGGACCTaGTGGGCCAATTGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRALGT*WANWSH
Trigger: ATGGGACCAATTGGCCCACCAGGTCCCCAAGGCCCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGGCCCAGCTATTCCTaGAGCCCCAGGGAGACCTTT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGPSYS*SPRETF
Trigger: AAAGGTCTCCCTGGGGCTCCAGGAATAGCTGGGCCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCAGGCCTGGCAAGCCTaGTTTCCCAAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLQAWQA*FPKARR
Trigger: CCTCCTGGCTTTGGGAAACCAGGCTTGCCAGGCCTG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATTCTCCCTTCAGGCCTaGCAAGCCTGGTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRFSLQA*QAWFPK
Trigger: TTTGGGAAACCAGGCTTGCCAGGCCTGAAGGGAGAA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGCCCTTGTTCCCCTTTaGCACCTGGACCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLALVPL*HLDPQE
Trigger: TTCCTGGGGGTCCAGGTGCCAAAGGGGAACAAGGGC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGGTCCAGTCAGACCTaGCTTCCCAGGAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGSSQT*LPRKTC
Trigger: GCAGGTCTTCCTGGGAAGCCAGGTCTGACTGGACCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAATGCCTTTTGGTCCTTaGGGTCCCATATTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRMPFGP*GPIFPG
Trigger: CCCTGGGAATATGGGACCCCAAGGACCAAAAGGCAT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGGCCTGGGAGACCATaGCTACCCGGGATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGPGRP*LPGMPF
Trigger: AAAAGGCATCCCGGGTAGCCATGGTCTCCCAGGCCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGATGATGGCACTCCCTaGAGCCTGATCCAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLDDGTP*SLIQVA
Trigger: GGCTACCTGGATCAGGCTTCAGGGAGTGCCATCATC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGTTCCTGGAGATGGTaGCTTGGCAGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSSWRW*LGSFLK
Trigger: CTTCAGAAAGCTGCCAAGGCACCATCTCCAGGAACT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCATGGCTACCCGGGATaGCTTTTGGTCCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLHGYPG*LLVLGV
Trigger: GACCCCAAGGACCAAAAGGCATCCCGGGTAGCCATG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAACTGGGCCTTTGGCCTaGCTTTATAAAACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRTGPLA*LYKTLR
Trigger: CCTGAGGGTTTTATAAAGGCAGGCCAAAGGCCCAGT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGCCTGGTTTTCCTGGTaGTCCAGAAGGACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLAWFSW*SRRTWV
Trigger: CACCCAGGTCCTTCTGGACCACCAGGAAAACCAGGC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCTCTCCTGGTTTTCCTaGGAGTCCTGGCACACCTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLLSWFS*ESWHTW
Trigger: CCAGGTGTGCCAGGACTCCCAGGAAAACCAGGAGAG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAATCACCTTTGATGCCTaGCTGTCCTGGAACCCCATT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRITFDA*LSWNPI
Trigger: AATGGGGTTCCAGGACAGCCAGGCATCAAAGGTGAT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGCCTTGGGGACCTGGTaGGCCAATTGGTCCCATTTC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLALGTW*ANWSHF
Trigger: GAAATGGGACCAATTGGCCCACCAGGTCCCCAAGGC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCTTTCCAATGCCTTCTaGCCCTCGTTCCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLLSNAF*PSFPRR
Trigger: CCTCCTGGGGAACGAGGGCCAGAAGGCATTGGAAAG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGAGACCTGGTTTTCCTaGGTACCCTGGTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRETWFS*VPWFSI
Trigger: GATGGAAAACCAGGGTACCCAGGAAAACCAGGTCTC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGGACCGGGACTTCCTaGATCCCCTTTAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRTGTS*IPFRPR
Trigger: CCTGGGTCTAAAGGGGATCCAGGAAGTCCCGGTCCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAATTCCTGTTACCCCCTaGTTGGCACTAACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRIPVTP*LALTRG
Trigger: CCCTCTTGTTAGTGCCAACCAGGGGGTAACAGGAAT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGCTGGAGCCACACCTaGTCATTTTCTGTGAGATCG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSWSHT*SFSVRS
Trigger: CGATCTCACAGAAAATGACCAGGTGTGGCTCCAGCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGCCTTGGCAGCTTTCTaGAGCTTCCTCTGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLALAAF*SFLCPD
Trigger: ATCTGGGCAGAGGAAGCTTCAGAAAGCTGCCAAGGC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGTAGTGGGCCTTTTATaGCTGTGGGCATTTGGTATC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRVVGLL*LWAFGI
Trigger: GATACCAAATGCCCACAGGCATAAAAGGCCCACTAC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGACCAGGAGTACCTTaGTCTCCTCTTACTGCTATA +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGPGVP*SPLTAI
Trigger: TATAGCAGTAAGAGGAGAGCAAGGTACTCCTGGTCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTATTGAGGCCCTTAGTTaGTATGCCAGCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLIEALS*YASWAR
Trigger: CCTGGCCCAGCTGGCATAGCAACTAAGGGCCTCAAT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGGAGTTCCTGGAGATaGTGCCTTGGCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGSSWR*CLGSFL
Trigger: CAGAAAGCTGCCAAGGCACCATCTCCAGGAACTCCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACAGCATATTCTCAGATaGATTCTGCGTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRQHILR*ILRAGS
Trigger: ACTCCCAGCACGCAGAATCCATCTGAGAATATGCTG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGTAGCCTGGTTTTCCTaGTGGTCCAGAAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLVAWFS*WSRRTW
Trigger: CCAGGTCCTTCTGGACCACCAGGAAAACCAGGCTAC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCATACCAGGGACTCCTaGTGCACCCTTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLHTRDS*CTLFSR
Trigger: CCTGGAGAAAAGGGTGCACCAGGAGTCCCTGGTATG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAAGACCCCTCTCACCTaGACGACCAGGAGCACCATA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLKTPLT*TTRSTI
Trigger: TATGGTGCTCCTGGTCGTCCAGGTGAGAGGGGTCTT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGAGACCTTTTGTTCCTaGAATCCCTGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLETFCS*NPWLAW
Trigger: CCAGGCCAGCCAGGGATTCCAGGAACAAAAGGTCTC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGGACCATCGAGACCTaGTTTTCCTGGGTACCCTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRTIET*FSWVPW
Trigger: CCAGGGTACCCAGGAAAACCAGGTCTCGATGGTCCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGGGCCTCTAGTACCTaGTATTCCAGGGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRASST*YSRGTS
Trigger: AGAGGTGCCCCTGGAATACCAGGTACTAGAGGCCCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTCCTGGAATGCCTGGTaGCCCAATAGGGCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLSWNAW*PNRASS
Trigger: ACTAGAGGCCCTATTGGGCCACCAGGCATTCCAGGA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGAATCCTGGAATGCCTaGTGGCCCAATAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLESWNA*WPNRAS
Trigger: AGAGGCCCTATTGGGCCACCAGGCATTCCAGGATTC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGAAAGACTGGGCCTTTaGCCTGCCTTTATAAAACCC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRERLGL*PAFIKP
Trigger: GGGTTTTATAAAGGCAGGCCAAAGGCCCAGTCTTTC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGGTCCCAGAAAGACTaGGCCTTTGGCCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGSQKD*AFGLPL
Trigger: TAAAGGCAGGCCAAAGGCCCAGTCTTTCTGGGACCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGGCCTACCCAAACATaGGTCCCTTTCACATGCACG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRPTQT*VPFTCT
Trigger: CGTGCATGTGAAAGGGACTCATGTTTGGGTAGGCCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCAGATGGATTCTGCGTaGTGGGAGTTCCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLQMDSA*WEFLEM
Trigger: CATCTCCAGGAACTCCCAGCACGCAGAATCCATCTG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTACCAGGGACTCCTGGTaGACCCTTTTCTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLTRDSW*TLFSRK
Trigger: TTTCCTGGAGAAAAGGGTGCACCAGGAGTCCCTGGT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATATGGGAGTTCCTATTaGTGGGTAAGCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRYGSSY*WVSFGE
Trigger: CTCTCCAAAGCTTACCCAGCAATAGGAACTCCCATA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGGACTTCCGTAGCCTaGTTTTCCTGGTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRTSVA*FSWWSR
Trigger: TCTGGACCACCAGGAAAACCAGGCTACGGAAGTCCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTTTTCCTGGGAGTCCTaGCACACCTGGTTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLFSWES*HTWFPY
Trigger: GTAGGGAAACCAGGTGTGCCAGGACTCCCAGGAAAA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATCCAACATCTCCTTTTaGTCCATATGGTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRSNISF*SIWSSL
Trigger: GAGAGAGGACCATATGGACCAAAAGGAGATGTTGGA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGATGCCTGGCTGTCCTaGAACCCCATTTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLDAWLS*NPIFTS
Trigger: AGAGGTGAAAATGGGGTTCCAGGACAGCCAGGCATC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTACCTGGTGGGCCAATTaGTCCCATTTCTCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLTWWAN*SHFSRK
Trigger: TTTCCGGGAGAAATGGGACCAATTGGCCCACCAGGT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTTCTCCCTTCAGGCCTaGCAAGCCTGGTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLFSLQA*QAWFPK
Trigger: TTTGGGAAACCAGGCTTGCCAGGCCTGAAGGGAGAA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTATGCCTTTTGGTCCTTaGGGTCCCATATTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLMPFGP*GPIFPG
Trigger: CCCTGGGAATATGGGACCCCAAGGACCAAAAGGCAT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGGAGTTCCTATTGCTaGGTAAGCTTTGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGSSYC*VSFGEN
Trigger: ATTCTCTCCAAAGCTTACCCAGCAATAGGAACTCCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCATTTGACTCGGCATTaGGAAGCTGGAGCCACACCT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLHLTRH*EAGATP
Trigger: AGGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATTATGGTGTAGGGAATaGAGAACTGTGTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRLWCRE*RTVSWC
Trigger: ACACCAAGACACAGTTCTTCATTCCCTACACCATAA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGTTCCTGGAGATGGTaGCTTGGCAGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLSSWRW*LGSFLK
Trigger: CTTCAGAAAGCTGCCAAGGCACCATCTCCAGGAACT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTTCTCAGATGGATTCTaGGTGCTGGGAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLFSDGF*VLGVPG
Trigger: TCCAGGAACTCCCAGCACGCAGAATCCATCTGAGAA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTACTGGGCCTTTGGCCTaGCTTTATAAAACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLTGPLA*LYKTLR
Trigger: CCTGAGGGTTTTATAAAGGCAGGCCAAAGGCCCAGT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTATCACCTTTGATGCCTaGCTGTCCTGGAACCCCATT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLITFDA*LSWNPI
Trigger: AATGGGGTTCCAGGACAGCCAGGCATCAAAGGTGAT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTATTCCTGTTACCCCCTaGTTGGCACTAACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLIPVTP*LALTRG
Trigger: CCCTCTTGTTAGTGCCAACCAGGGGGTAACAGGAAT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGCTGGAGCCACACCTaGTCATTTTCTGTGAGATCG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLSWSHT*SFSVRS
Trigger: CGATCTCACAGAAAATGACCAGGTGTGGCTCCAGCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACACATGCACGTGGTATaGAAAATAGTATATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRHMHVV*KIVYSW
Trigger: CCAGGAATATACTATTTTTCATACCACGTGCATGTG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAATTATAACTTCACTTaGATGGGAGGCACAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRNYNFT*MGGTRY
Trigger: GTACCTTGTGCCTCCCATTCAAGTGAAGTTATAATT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGTAGTGGGCCTTTTATaGCTGTGGGCATTTGGTATC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLVVGLL*LWAFGI
Trigger: GATACCAAATGCCCACAGGCATAAAAGGCCCACTAC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGACCAGGAGTACCTTaGTCTCCTCTTACTGCTATA +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGPGVP*SPLTAI
Trigger: TATAGCAGTAAGAGGAGAGCAAGGTACTCCTGGTCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCAGCATATTCTCAGATaGATTCTGCGTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLQHILR*ILRAGS
Trigger: ACTCCCAGCACGCAGAATCCATCTGAGAATATGCTG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGCCTTTTATGCCTGTaGGCATTTGGTATCGTTCAG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGLLCL*AFGIVQ
Trigger: CTGAACGATACCAAATGCCCACAGGCATAAAAGGCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTACTGTGTCTTGGTGTTaGGTAGTGGGCCTTTTATGC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLTVSWC*VVGLLC
Trigger: GCATAAAAGGCCCACTACCCAACACCAAGACACAGT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGAAAGACTGGGCCTTTaGCCTGCCTTTATAAAACCC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLERLGL*PAFIKP
Trigger: GGGTTTTATAAAGGCAGGCCAAAGGCCCAGTCTTTC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAATAACTTCACTTGAATaGGAGGCACAAGGTACATGT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRITSLE*EAQGTC
Trigger: ACATGTACCTTGTGCCTCCCATTCAAGTGAAGTTAT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTATGGGAGTTCCTATTaGTGGGTAAGCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLYGSSY*WVSFGE
Trigger: CTCTCCAAAGCTTACCCAGCAATAGGAACTCCCATA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTCCAACATCTCCTTTTaGTCCATATGGTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLSNISF*SIWSSL
Trigger: GAGAGAGGACCATATGGACCAAAAGGAGATGTTGGA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATTTTATCAAATGGTATaGGAGTTCCTATTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRFYQMV*EFLLLG
Trigger: ACCCAGCAATAGGAACTCCCATACCATTTGATAAAA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCCTGAGAAAGAGGAGTaGACATACTCAGAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLPEKEE*TYSEEY
Trigger: ATACTCCTCTGAGTATGTCCACTCCTCTTTCTCAGG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTTATGGTGTAGGGAATaGAGAACTGTGTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLLWCRE*RTVSWC
Trigger: ACACCAAGACACAGTTCTTCATTCCCTACACCATAA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATTGCTCTCCTCTTACTaGTATACCTTTACTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRLLSSY*YTFTLY
Trigger: ATAAAGAGTAAAGGTATAGCAGTAAGAGGAGAGCAA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGAACAGCAAATTGCTaGTTTCAAATTAATTCAGCC +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRTANC*FQINSA
Trigger: GGCTGAATTAATTTGAAAGCAGCAATTTGCTGTTCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243222.8
ENST00000651968.1
CDS-3UTR CCA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAACAATATGGTTTTATTaGGACTATCATCCACAGACT +
Preference number: 4 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRTIWFY*DYHPQT
Trigger: AGTCTGTGGATGATAGTCCCAATAAAACCATATTGT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327673.4
CDS-3UTR TCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCACATGCACGTGGTATaGAAAATAGTATATTCCTGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLHMHVV*KIVYSW
Trigger: CCAGGAATATACTATTTTTCATACCACGTGCATGTG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCAAAAAGGGTATTTGTaGCAGCATATTCTCAGATGG +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLQKGYL*QHILRW
Trigger: CCATCTGAGAATATGCTGCCACAAATACCCTTTTTG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR TCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTATATTCCTGGTATCTaGCAAGTAAAGATTCCAGTC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLYIPGI*QVKIPV
Trigger: GACTGGAATCTTTACTTGTCAGATACCAGGAATATA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR GCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTTGCTCTCCTCTTACTaGTATACCTTTACTCTTTAT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLLLSSY*YTFTLY
Trigger: ATAAAGAGTAAAGGTATAGCAGTAAGAGGAGAGCAA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTTATATGATACCTCCTaGATGTTTCCTAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLLYDTS*MFPRSS
Trigger: AGAACTTCTAGGAAACATCCAGGAGGTATCATATAA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CCA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGTTTCCAAGTTATGCTaGGTATATAAAAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLVSKLC*VYKKLL
Trigger: GAGAAGCTTTTTATATACCCAGCATAACTTGGAAAC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp TGGTGGCCCGGTGGGTCCATTGAGGCCCTTAGTTGCTATGCCAGCTaGGCCAGGAGGACCGGGACTTCCTGGATCCCCTTTAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: WWPGGSIEALSCYAS*ARRTGTSWIPFRPR
Trigger: CCTGGGTCTAAAGGGGATCCAGGAAGTCCCGGTCCTCCTGGCCCAGCTGGCATAGCAACTAAGGGCCTCAATGGACCCACCGGGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp AAGACCAGGCTCTCCAGAGTGGCCTCTTGGACCTGGAGGCCCTGGTaGCCCGGTGGGTCCATTGAGGCCCTTAGTTGCTATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KTRLSRVASWTWRPW*PGGSIEALSCYASW
Trigger: CCAGCTGGCATAGCAACTAAGGGCCTCAATGGACCCACCGGGCCACCAGGGCCTCCAGGTCCAAGAGGCCACTCTGGAGAGCCTGGTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp TGGAAGACCAGGCTCTCCAGAGTGGCCTCTTGGACCTGGAGGCCCTaGTGGCCCGGTGGGTCCATTGAGGCCCTTAGTTGCTATGCCAGC +
Preference number: 5 (lower is better)
Translates to: WKTRLSRVASWTWRP*WPGGSIEALSCYAS
Trigger: GCTGGCATAGCAACTAAGGGCCTCAATGGACCCACCGGGCCACCAGGGCCTCCAGGTCCAAGAGGCCACTCTGGAGAGCCTGGTCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp TCCTGGCAACCCTGGCTCTCCTTGGAGTCCAGGACTTCCGTAGCCTaGTTTTCCTGGTGGTCCAGAAGGACCTGGGTGCCCTCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SWQPWLSLESRTSVA*FSWWSRRTWVPSRS
Trigger: GGACCTCGAGGGCACCCAGGTCCTTCTGGACCACCAGGAAAACCAGGCTACGGAAGTCCTGGACTCCAAGGAGAGCCAGGGTTGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000452729.1
ENST00000651968.1
CDS CCA 90 bp GCCCTTAGTTGCTATGCCAGCTGGGCCAGGAGGACCGGGACTTCCTaGATCCCCTTTAGACCCAGGGAATCCTGGAATGCCTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: ALSCYASWARRTGTS*IPFRPRESWNAWWP
Trigger: GGGCCACCAGGCATTCCAGGATTCCCTGGGTCTAAAGGGGATCCAGGAAGTCCCGGTCCTCCTGGCCCAGCTGGCATAGCAACTAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp CCTGGCTTTCCAATGCCTTCTGGCCCTCGTTCCCCAGGAGGGCCTTaGGGACCTGGTGGGCCAATTGGTCCCATTTCTCCCGGAAAACCT +
Preference number: 5 (lower is better)
Translates to: PGFPMPSGPRSPGGP*GPGGPIGPISPGKP
Trigger: AGGTTTTCCGGGAGAAATGGGACCAATTGGCCCACCAGGTCCCCAAGGCCCTCCTGGGGAACGAGGGCCAGAAGGCATTGGAAAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp TTAGGGCCTGGGAGACCATGGCTACCCGGGATGCCTTTTGGTCCTTaGGGTCCCATATTCCCAGGGGGTCCAGTCAGACCTGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LGPGRPWLPGMPFGP*GPIFPGGPVRPGFP
Trigger: TGGGAAGCCAGGTCTGACTGGACCCCCTGGGAATATGGGACCCCAAGGACCAAAAGGCATCCCGGGTAGCCATGGTCTCCCAGGCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp TGGCCCAATAGGGCCTCTAGTACCTGGTATTCCAGGGGCACCTCTTaGGCCAGCCTCTCCATTGTGTCCGGGCATTCCCTTTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WPNRASSTWYSRGTS*ASLSIVSGHSLCSC
Trigger: GCAGGAGCAAAGGGAATGCCCGGACACAATGGAGAGGCTGGCCCAAGAGGTGCCCCTGGAATACCAGGTACTAGAGGCCCTATTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp AGGGAATCCTGGAATGCCTGGTGGCCCAATAGGGCCTCTAGTACCTaGTATTCCAGGGGCACCTCTTGGGCCAGCCTCTCCATTGTGTCC +
Preference number: 5 (lower is better)
Translates to: RESWNAWWPNRASST*YSRGTSWASLSIVS
Trigger: GGACACAATGGAGAGGCTGGCCCAAGAGGTGCCCCTGGAATACCAGGTACTAGAGGCCCTATTGGGCCACCAGGCATTCCAGGATTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp GGGACTTCCTGGATCCCCTTTAGACCCAGGGAATCCTGGAATGCCTaGTGGCCCAATAGGGCCTCTAGTACCTGGTATTCCAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: GTSWIPFRPRESWNA*WPNRASSTWYSRGT
Trigger: GGTGCCCCTGGAATACCAGGTACTAGAGGCCCTATTGGGCCACCAGGCATTCCAGGATTCCCTGGGTCTAAAGGGGATCCAGGAAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp AGGAGGACCGGGACTTCCTGGATCCCCTTTAGACCCAGGGAATCCTaGAATGCCTGGTGGCCCAATAGGGCCTCTAGTACCTGGTATTCC +
Preference number: 5 (lower is better)
Translates to: RRTGTSWIPFRPRES*NAWWPNRASSTWYS
Trigger: GGAATACCAGGTACTAGAGGCCCTATTGGGCCACCAGGCATTCCAGGATTCCCTGGGTCTAAAGGGGATCCAGGAAGTCCCGGTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp ACTTCCTGGATCCCCTTTAGACCCAGGGAATCCTGGAATGCCTGGTaGCCCAATAGGGCCTCTAGTACCTGGTATTCCAGGGGCACCTCT +
Preference number: 5 (lower is better)
Translates to: TSWIPFRPRESWNAW*PNRASSTWYSRGTS
Trigger: AGAGGTGCCCCTGGAATACCAGGTACTAGAGGCCCTATTGGGCCACCAGGCATTCCAGGATTCCCTGGGTCTAAAGGGGATCCAGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS GCA 90 bp GTTGGCACTAACAAGAGGGGTCCCAGAAAGACTGGGCCTTTGGCCTaGCTTTATAAAACCCTCAGGCATGACTGCTTGACCTGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: VGTNKRGPRKTGPLA*LYKTLRHDCLTWWA
Trigger: GGCCCACCAGGTCAAGCAGTCATGCCTGAGGGTTTTATAAAGGCAGGCCAAAGGCCCAGTCTTTCTGGGACCCCTCTTGTTAGTGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACTCAGGCATGACTGCTaGACCTGGTGGGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRLRHDC*TWWAWR
Trigger: CCTCCAGGCCCACCAGGTCAAGCAGTCATGCCTGAG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 90 bp ACATACTCAGAGGAGTATAGGCCATTTGACTCGGCATTGGGAAGCTaGAGCCACACCTGGTCATTTTCTGTGAGATCGATGATGGCACTC +
Preference number: 5 (lower is better)
Translates to: TYSEEYRPFDSALGS*SHTWSFSVRSMMAL
Trigger: GAGTGCCATCATCGATCTCACAGAAAATGACCAGGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATGGCCTATACTCCTCTGAGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATTCCAGGGGCACCTCTaGGGCCAGCCTCTCCATTGT +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRFQGHL*GQPLHC
Trigger: ACAATGGAGAGGCTGGCCCAAGAGGTGCCCCTGGAA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGGCCCGGTGGGTCCATaGAGGCCCTTAGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRGPVGP*RPLVAM
Trigger: CATAGCAACTAAGGGCCTCAATGGACCCACCGGGCC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACAACCCTGGCTCTCCTaGGAGTCCAGGACTTCCGTA +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRQPWLS*ESRTSV
Trigger: TACGGAAGTCCTGGACTCCAAGGAGAGCCAGGGTTG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGACCTGGTGGGCCAATaGGTCCCATTTCTCCCGGAA +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRDLVGQ*VPFLPE
Trigger: TTCCGGGAGAAATGGGACCAATTGGCCCACCAGGTC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACCTGTTACCCCCTGGTaGGCACTAACAAGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRPVTPW*ALTRGV
Trigger: GACCCCTCTTGTTAGTGCCAACCAGGGGGTAACAGG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACCATTTGACTCGGCATaGGGAAGCTGGAGCCACACC +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRPFDSA*GSWSHT
Trigger: GGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATGG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGATGCCTTTTGGTCCTaGGGGTCCCATATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRDAFWS*GSHIPR
Trigger: CCTGGGAATATGGGACCCCAAGGACCAAAAGGCATC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACTCCAGGATCACCTTTaGGACCTGGTAACCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRLQDHL*DLVTLG
Trigger: ACCCAGGGTTACCAGGTCCAAAAGGTGATCCTGGAG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCTCAGGCATGACTGCTaGACCTGGTGGGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLLRHDC*TWWAWR
Trigger: CCTCCAGGCCCACCAGGTCAAGCAGTCATGCCTGAG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTTCCAGGGGCACCTCTaGGGCCAGCCTCTCCATTGT +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLFQGHL*GQPLHC
Trigger: ACAATGGAGAGGCTGGCCCAAGAGGTGCCCCTGGAA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGGCCCGGTGGGTCCATaGAGGCCCTTAGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLGPVGP*RPLVAM
Trigger: CATAGCAACTAAGGGCCTCAATGGACCCACCGGGCC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS TCA 90 bp GCTCTCCTCTTACTGCTATACCTTTACTCTTTATGGTGTAGGGAATaGAGAACTGTGTCTTGGTGTTGGGTAGTGGGCCTTTTATGCCTG +
Preference number: 5 (lower is better)
Translates to: ALLLLLYLYSLWCRE*RTVSWCWVVGLLCL
Trigger: CAGGCATAAAAGGCCCACTACCCAACACCAAGACACAGTTCTTCATTCCCTACACCATAAAGAGTAAAGGTATAGCAGTAAGAGGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000452729.1
ENST00000651968.1
CDS GCA 90 bp CCAGGTAGCCTTTGGTGTATTCATCATAGGTGTACATTACAGGGGTaGCATTCTTATACAGGCCTACCCAAACATGAGTCCCTTTCACAT +
Preference number: 5 (lower is better)
Translates to: PGSLWCIHHRCTLQG*HSYTGLPKHESLSH
Trigger: ATGTGAAAGGGACTCATGTTTGGGTAGGCCTGTATAAGAATGGCACCCCTGTAATGTACACCTATGATGAATACACCAAAGGCTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAATGAAGAACTGTGTCTaGGTGTTGGGTAGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRMKNCV*VLGSGP
Trigger: AGGCCCACTACCCAACACCAAGACACAGTTCTTCAT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAAACCTCTATCACCTTaGATGCCTGGCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRKPLSP*MPGCPG
Trigger: TCCAGGACAGCCAGGCATCAAAGGTGATAGAGGTTT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCCATTTGACTCGGCATaGGGAAGCTGGAGCCACACC +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLPFDSA*GSWSHT
Trigger: GGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATGG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGGAGTATAGGCCATTaGACTCGGCATTGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRSIGH*TRHWEA
Trigger: AGCTTCCCAATGCCGAGTCAAATGGCCTATACTCCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACTGTGTGTACTCACATaGGAGCCACTAGGAATCCTG +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRLCVLT*EPLGIL
Trigger: CAGGATTCCTAGTGGCTCCAATGTGAGTACACACAG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAACTGTGTCTTGGTGTaGGGTAGTGGGCCTTTTATG +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRNCVLV*GSGPFM
Trigger: CATAAAAGGCCCACTACCCAACACCAAGACACAGTT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGATGCCTTTTGGTCCTaGGGGTCCCATATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLDAFWS*GSHIPR
Trigger: CCTGGGAATATGGGACCCCAAGGACCAAAAGGCATC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCTCCAGGATCACCTTTaGGACCTGGTAACCCTGGGT +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLLQDHL*DLVTLG
Trigger: ACCCAGGGTTACCAGGTCCAAAAGGTGATCCTGGAG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAAGAAAGACTGGGCCTTaGGCCTGCCTTTATAAAACC +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRRKTGP*ACLYKT
Trigger: GGTTTTATAAAGGCAGGCCAAAGGCCCAGTCTTTCT...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGAGTATGGGAGTTCCTATaGCTGGGTAAGCTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRVWEFL*LGKLWR
Trigger: TCTCCAAAGCTTACCCAGCAATAGGAACTCCCATAC...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATATGCCTGTGGGCATTaGGTATCGTTCAGCGTAAAA +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRYACGH*VSFSVK
Trigger: TTTTACGCTGAACGATACCAAATGCCCACAGGCATA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGACAGCAAAAAGGGTATTaGTGGCAGCATATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRQQKGY*WQHILR
Trigger: TCTGAGAATATGCTGCCACAAATACCCTTTTTGCTG...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTATGAAGAACTGTGTCTaGGTGTTGGGTAGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLMKNCV*VLGSGP
Trigger: AGGCCCACTACCCAACACCAAGACACAGTTCTTCAT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTGGACCAGGAGTACCTaGCTCTCCTCTTACTGCTAT +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLWTRST*LSSYCY
Trigger: ATAGCAGTAAGAGGAGAGCAAGGTACTCCTGGTCCA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAAACCTCTATCACCTTaGATGCCTGGCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLKPLSP*MPGCPG
Trigger: TCCAGGACAGCCAGGCATCAAAGGTGATAGAGGTTT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGGAGTATAGGCCATTaGACTCGGCATTGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRSIGH*TRHWEA
Trigger: AGCTTCCCAATGCCGAGTCAAATGGCCTATACTCCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTCTGTGTGTACTCACATaGGAGCCACTAGGAATCCTG +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLLCVLT*EPLGIL
Trigger: CAGGATTCCTAGTGGCTCCAATGTGAGTACACACAG...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAACTGTGTCTTGGTGTaGGGTAGTGGGCCTTTTATG +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLNCVLV*GSGPFM
Trigger: CATAAAAGGCCCACTACCCAACACCAAGACACAGTT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTAGAAAGACTGGGCCTTaGGCCTGCCTTTATAAAACC +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLRKTGP*ACLYKT
Trigger: GGTTTTATAAAGGCAGGCCAAAGGCCCAGTCTTTCT...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTGTATGGGAGTTCCTATaGCTGGGTAAGCTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLVWEFL*LGKLWR
Trigger: TCTCCAAAGCTTACCCAGCAATAGGAACTCCCATAC...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS TCA 90 bp ATACAGGCCTACCCAAACATGAGTCCCTTTCACATGCACGTGGTATaGAAAATAGTATATTCCTGGTATCTGACAAGTAAAGATTCCAGT +
Preference number: 5 (lower is better)
Translates to: IQAYPNMSPFHMHVV*KIVYSWYLTSKDSS
Trigger: ACTGGAATCTTTACTTGTCAGATACCAGGAATATACTATTTTTCATACCACGTGCATGTGAAAGGGACTCATGTTTGGGTAGGCCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp ATACCTCCTGGATGTTTCCTAGAAGTTCTCATATTCATAGTTAGAAACAGGCTTTATGCCTGTGGGCATTaGGTATCGTTCAGCGTAAAA +
Preference number: 5 (lower is better)
Translates to: IPPGCFLEVLIFIVRNRLYACGH*VSFSVK
Trigger: TTTTACGCTGAACGATACCAAATGCCCACAGGCATA...AAGCCTGTTTCTAACTATGAATATGAGAACTTCTAGGAAACATCCAGGAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS-3UTR CAA 90 bp CTTCACTTGAATGGGAGGCACAAGGTACATGTGCTAATGTTCTGTAAATCCAGATACAATATGGTTTTATaGGGACTATCATCCACAGAC +
Preference number: 5 (lower is better)
Translates to: LHLNGRHKVHVLMFCKSRYNMVL*GLSSTD
Trigger: GTCTGTGGATGATAGTCCCAATAAAACCATATTGTA...TCTGGATTTACAGAACATTAGCACATGTACCTTGTGCCTCCCATTCAAGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327673.4
CDS GCA 72 bp CCCTGGTGGCCCGGTGGGTCCATTGAGGCCCTTAGTTaGTATGCCAGCTGGGCCAGGAGGACCGGGACTTCC +
Preference number: 6 (lower is better)
Translates to: PWWPGGSIEALS*YASWARRTGTS
Trigger: GGAAGTCCCGGTCCTCCTGGCCCAGCTGGCATAGCAACTAAGGGCCTCAATGGACCCACCGGGCCACCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CAA 90 bp CTAGTACCTGGTATTCCAGGGGCACCTCTTGGGCCAGCCTCTCCATaGTGTCCGGGCATTCCCTTTGCTCCTGCTGGGCCCACAGGGCCT +
Preference number: 6 (lower is better)
Translates to: LVPGIPGAPLGPASP*CPGIPFAPAGPTGP
Trigger: AGGCCCTGTGGGCCCAGCAGGAGCAAAGGGAATGCCCGGACACAATGGAGAGGCTGGCCCAAGAGGTGCCCCTGGAATACCAGGTACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp CCCTGGCTCTCCTTGGAGTCCAGGACTTCCGTAGCCTaGTTTTCCTGGTGGTCCAGAAGGACCTGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: PWLSLESRTSVA*FSWWSRRTWVP
Trigger: GGGCACCCAGGTCCTTCTGGACCACCAGGAAAACCAGGCTACGGAAGTCCTGGACTCCAAGGAGAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000452729.1
ENST00000651968.1
CDS CCA 72 bp GGGAGACCATGGCTACCCGGGATGCCTTTTGGTCCTTaGGGTCCCATATTCCCAGGGGGTCCAGTCAGACCT +
Preference number: 6 (lower is better)
Translates to: GRPWLPGMPFGP*GPIFPGGPVRP
Trigger: AGGTCTGACTGGACCCCCTGGGAATATGGGACCCCAAGGACCAAAAGGCATCCCGGGTAGCCATGGTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp TGGAATGCCTGGTGGCCCAATAGGGCCTCTAGTACCTaGTATTCCAGGGGCACCTCTTGGGCCAGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: WNAWWPNRASST*YSRGTSWASLS
Trigger: GGAGAGGCTGGCCCAAGAGGTGCCCCTGGAATACCAGGTACTAGAGGCCCTATTGGGCCACCAGGCATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp TGCTATGCCAGCTGGGCCAGGAGGACCGGGACTTCCTaGATCCCCTTTAGACCCAGGGAATCCTGGAATGCC +
Preference number: 6 (lower is better)
Translates to: CYASWARRTGTS*IPFRPRESWNA
Trigger: GGCATTCCAGGATTCCCTGGGTCTAAAGGGGATCCAGGAAGTCCCGGTCCTCCTGGCCCAGCTGGCATAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp GGTGGGTCCATTGAGGCCCTTAGTTGCTATGCCAGCTaGGCCAGGAGGACCGGGACTTCCTGGATCCCCTTT +
Preference number: 6 (lower is better)
Translates to: GGSIEALSCYAS*ARRTGTSWIPF
Trigger: AAAGGGGATCCAGGAAGTCCCGGTCCTCCTGGCCCAGCTGGCATAGCAACTAAGGGCCTCAATGGACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp TGTGGGACCCTGAGGGCCTGGAAGACCCCTCTCACCTaGACGACCAGGAGCACCATATCCCATTTCCCCTTT +
Preference number: 6 (lower is better)
Translates to: CGTLRAWKTPLT*TTRSTISHFPF
Trigger: AAAGGGGAAATGGGATATGGTGCTCCTGGTCGTCCAGGTGAGAGGGGTCTTCCAGGCCCTCAGGGTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000452729.1
ENST00000651968.1
CDS CCA 72 bp AGGGCCTCTAGTACCTGGTATTCCAGGGGCACCTCTTaGGCCAGCCTCTCCATTGTGTCCGGGCATTCCCTT +
Preference number: 6 (lower is better)
Translates to: RASSTWYSRGTS*ASLSIVSGHSL
Trigger: AAGGGAATGCCCGGACACAATGGAGAGGCTGGCCCAAGAGGTGCCCCTGGAATACCAGGTACTAGAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp CTCAGATGGATTCTGCGTGCTGGGAGTTCCTGGAGATaGTGCCTTGGCAGCTTTCTGAAGCTTCCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: LRWILRAGSSWR*CLGSFLKLPLP
Trigger: GGGCAGAGGAAGCTTCAGAAAGCTGCCAAGGCACCATCTCCAGGAACTCCCAGCACGCAGAATCCATCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000452729.1
ENST00000651968.1
CDS GCA 72 bp AGATGGATTCTGCGTGCTGGGAGTTCCTGGAGATGGTaGCTTGGCAGCTTTCTGAAGCTTCCTCTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: RWILRAGSSWRW*LGSFLKLPLPR
Trigger: TCTGGGCAGAGGAAGCTTCAGAAAGCTGCCAAGGCACCATCTCCAGGAACTCCCAGCACGCAGAATCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000452729.1
ENST00000651968.1
CDS CCA 72 bp TGGATCCCCTTTAGACCCAGGGAATCCTGGAATGCCTaGTGGCCCAATAGGGCCTCTAGTACCTGGTATTCC +
Preference number: 6 (lower is better)
Translates to: WIPFRPRESWNA*WPNRASSTWYS
Trigger: GGAATACCAGGTACTAGAGGCCCTATTGGGCCACCAGGCATTCCAGGATTCCCTGGGTCTAAAGGGGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CAA 72 bp GGCACTAACAAGAGGGGTCCCAGAAAGACTGGGCCTTaGGCCTGCCTTTATAAAACCCTCAGGCATGACTGC +
Preference number: 6 (lower is better)
Translates to: GTNKRGPRKTGP*ACLYKTLRHDC
Trigger: GCAGTCATGCCTGAGGGTTTTATAAAGGCAGGCCAAAGGCCCAGTCTTTCTGGGACCCCTCTTGTTAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp AACATCTCCTTTTGGTCCATATGGTCCTCTCTCTCCTaGTTTTCCTGGGAGTCCTGGCACACCTGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: NISFWSIWSSLS*FSWESWHTWFP
Trigger: GGGAAACCAGGTGTGCCAGGACTCCCAGGAAAACCAGGAGAGAGAGGACCATATGGACCAAAAGGAGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000452729.1
ENST00000651968.1
CDS CAA 72 bp AAGAGGAGTGGACATACTCAGAGGAGTATAGGCCATTaGACTCGGCATTGGGAAGCTGGAGCCACACCTGGT +
Preference number: 6 (lower is better)
Translates to: KRSGHTQRSIGH*TRHWEAGATPG
Trigger: ACCAGGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATGGCCTATACTCCTCTGAGTATGTCCACTCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CAA 90 bp GAGGAGTGGACATACTCAGAGGAGTATAGGCCATTTGACTCGGCATaGGGAAGCTGGAGCCACACCTGGTCATTTTCTGTGAGATCGATG +
Preference number: 6 (lower is better)
Translates to: EEWTYSEEYRPFDSA*GSWSHTWSFSVRSM
Trigger: CATCGATCTCACAGAAAATGACCAGGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATGGCCTATACTCCTCTGAGTATGTCCACTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp GAGGAGTATAGGCCATTTGACTCGGCATTGGGAAGCTaGAGCCACACCTGGTCATTTTCTGTGAGATCGATG +
Preference number: 6 (lower is better)
Translates to: EEYRPFDSALGS*SHTWSFSVRSM
Trigger: CATCGATCTCACAGAAAATGACCAGGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATGGCCTATACTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CAA 72 bp ACATACTCAGAGGAGTATAGGCCATTTGACTCGGCATaGGGAAGCTGGAGCCACACCTGGTCATTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: TYSEEYRPFDSA*GSWSHTWSFSV
Trigger: CACAGAAAATGACCAGGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATGGCCTATACTCCTCTGAGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS TCA 72 bp CTGGTCATTTTCTGTGAGATCGATGATGGCACTCCCTaGAGCCTGATCCAGGTAGCCTTTGGTGTATTCATC +
Preference number: 6 (lower is better)
Translates to: LVIFCEIDDGTP*SLIQVAFGVFI
Trigger: GATGAATACACCAAAGGCTACCTGGATCAGGCTTCAGGGAGTGCCATCATCGATCTCACAGAAAATGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS CCA 72 bp GTGTCTTGGTGTTGGGTAGTGGGCCTTTTATGCCTGTaGGCATTTGGTATCGTTCAGCGTAAAACACTCCAT +
Preference number: 6 (lower is better)
Translates to: VSWCWVVGLLCL*AFGIVQRKTLH
Trigger: ATGGAGTGTTTTACGCTGAACGATACCAAATGCCCACAGGCATAAAAGGCCCACTACCCAACACCAAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000418500.1
ENST00000452729.1
ENST00000651968.1
CDS GCA 72 bp AGAACTGTGTCTTGGTGTTGGGTAGTGGGCCTTTTATaGCTGTGGGCATTTGGTATCGTTCAGCGTAAAACA +
Preference number: 6 (lower is better)
Translates to: RTVSWCWVVGLL*LWAFGIVQRKT
Trigger: TGTTTTACGCTGAACGATACCAAATGCCCACAGGCATAAAAGGCCCACTACCCAACACCAAGACACAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000418500.1
ENST00000452729.1
ENST00000651968.1
CDS GCA 72 bp CTTTGGTGTATTCATCATAGGTGTACATTACAGGGGTaGCATTCTTATACAGGCCTACCCAAACATGAGTCC +
Preference number: 6 (lower is better)
Translates to: LWCIHHRCTLQG*HSYTGLPKHES
Trigger: GGACTCATGTTTGGGTAGGCCTGTATAAGAATGGCACCCCTGTAATGTACACCTATGATGAATACACCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1
CDS TCA 72 bp TTACTGCTATACCTTTACTCTTTATGGTGTAGGGAATaGAGAACTGTGTCTTGGTGTTGGGTAGTGGGCCTT +
Preference number: 6 (lower is better)
Translates to: LLLYLYSLWCRE*RTVSWCWVVGL
Trigger: AAGGCCCACTACCCAACACCAAGACACAGTTCTTCATTCCCTACACCATAAAGAGTAAAGGTATAGCAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000452729.1
ENST00000651968.1
CDS CCA 72 bp GCTGTTGCCTGTTATACAAAATTTTATCAAATGGTATaGGAGTTCCTATTGCTGGGTAAGCTTTGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: AVACYTKFYQMV*EFLLLGKLWRE
Trigger: TTCTCTCCAAAGCTTACCCAGCAATAGGAACTCCCATACCATTTGATAAAATTTTGTATAACAGGCAACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243222.8
ENST00000327673.4
ENST00000651968.1