RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000164597, ENSG00000284369

Ensembl transcript IDs: ENST00000297135.9, ENST00000347053.8, ENST00000393603.7, ENST00000462342.1, ENST00000464542.5, ENST00000468350.5, ENST00000469503.1, ENST00000475638.6, ENST00000605888.1, ENST00000638286.1, ENST00000638872.1, ENST00000639330.3, ENST00000639445.1, ENST00000639557.3, ENST00000639672.1, ENST00000639798.1, ENST00000640273.1, ENST00000640820.3

Found 875 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAACATTTCCAACTGCTGGTTGCTCCAGCACCCGTGCCTAGGCAGTaGGGTGGCCCGCCACTGGAAGGTGCAGTCACATGTCCATGCCCC +
Preference number: 1 (lower is better)
Translates to: QHFQLLVAPAPVPRQ*GGPPLEGAVTCPCP
Trigger: GGGGCATGGACATGTGACTGCACCTTCCAGTGGCGGGCCACCTCACTGCCTAGGCACGGGTGCTGGAGCAACCAGCAGTTGGAAATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR GCA 90 bp GATGTTGTGGCCAACATTTCCAACTGCTGGTTGCTCCAGCACCCGTaGCTAGGCAGTGAGGTGGCCCGCCACTGGAAGGTGCAGTCACAT +
Preference number: 1 (lower is better)
Translates to: DVVANISNCWLLQHP*LGSEVARHWKVQSH
Trigger: ATGTGACTGCACCTTCCAGTGGCGGGCCACCTCACTGCCTAGGCACGGGTGCTGGAGCAACCAGCAGTTGGAAATGTTGGCCACAACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 90 bp GTCAGTGCCAAGAGGCTACCAGAACATGGGGCAGGTGGCTGGTGTTaGTGTCCCAGCCTAAGAGCCACCTGCTGCAGTTACCATGGCATG +
Preference number: 1 (lower is better)
Translates to: VSAKRLPEHGAGGWC*CPSLRATCCSYHGM
Trigger: CATGCCATGGTAACTGCAGCAGGTGGCTCTTAGGCTGGGACACCAACACCAGCCACCTGCCCCATGTTCTGGTAGCCTCTTGGCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR TCA 90 bp ACGCCCAGAGGGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTaGGGGCTCAGGGTCACTTCTGGAAACAAAGCTGACAGGCTGATG +
Preference number: 1 (lower is better)
Translates to: TPRGPVAHVGCGYQA*GLRVTSGNKADRLM
Trigger: CATCAGCCTGTCAGCTTTGTTTCCAGAAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCCCTCTGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 90 bp AGTCTGGTCAGTGCCAAGAGGCTACCAGAACATGGGGCAGGTGGCTaGTGTTGGTGTCCCAGCCTAAGAGCCACCTGCTGCAGTTACCAT +
Preference number: 1 (lower is better)
Translates to: SLVSAKRLPEHGAGG*CWCPSLRATCCSYH
Trigger: ATGGTAACTGCAGCAGGTGGCTCTTAGGCTGGGACACCAACACCAGCCACCTGCCCCATGTTCTGGTAGCCTCTTGGCACTGACCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR CCA 90 bp AGGGTCCGAGCTAATCTTTATCCACACATACGCCCAGAGGGCCAGTaGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCA +
Preference number: 1 (lower is better)
Translates to: RVRANLYPHIRPEGQ*LMWDVGTKLEGSGS
Trigger: TGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCCCTCTGGGCGTATGTGTGGATAAAGATTAGCTCGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR TCA 90 bp CCCAGCCTAAGAGCCACCTGCTGCAGTTACCATGGCATGCTGAGTTaGTGCACCAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGA +
Preference number: 1 (lower is better)
Translates to: PSLRATCCSYHGMLS*CTRWQQPSVIISNG
Trigger: TCCATTGGAAATAATAACGGATGGCTGCTGCCACCTGGTGCATCAACTCAGCATGCCATGGTAACTGCAGCAGGTGGCTCTTAGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR TCA 90 bp GGTGAGAGCAGTTGCAGGGAAGAGTGTTGCTTAATAAGCCATGTATaGCAGTTAAAGCACCCCACCCTGGGCATGGTTGGGGTACATGGG +
Preference number: 1 (lower is better)
Translates to: GESSCREECCLISHV*QLKHPTLGMVGVHG
Trigger: CCCATGTACCCCAACCATGCCCAGGGTGGGGTGCTTTAACTGTCATACATGGCTTATTAAGCAACACTCTTCCCTGCAACTGCTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR GCA 90 bp ATGCATTCATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTaGTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGG +
Preference number: 1 (lower is better)
Translates to: MHSWGTTGGPWYPSG*WVVLVSSSELFRTW
Trigger: CCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATGAATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 90 bp CATTCATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTaGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTA +
Preference number: 1 (lower is better)
Translates to: HSWGTTGGPWYPSGC*VVLVSSSELFRTWV
Trigger: TACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 90 bp GTGAATGCATTCATGGGGCACTACTGGAGGGCCATGGTATCCAAGTaGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCAC +
Preference number: 1 (lower is better)
Translates to: VNAFMGHYWRAMVSK*LLGCSCFLLRTVSH
Trigger: GTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATGAATGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 90 bp AAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTaGGAACCAAGGCAGAGGCAGGATGAGAAGAAGAAAATATGGGAA +
Preference number: 1 (lower is better)
Translates to: KYRRGTRGMGLDKLT*EPRQRQDEKKKIWE
Trigger: TTCCCATATTTTCTTCTTCTCATCCTGCCTCTGCCTTGGTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR TCA 90 bp CCGGGGCTGGTAACCTCTCCCATTTCTGTGTCAGATGTTCATAGCTaGGTAACAGATAAGCAAGGAAAAAGAGCAGGGTCCGAGCTAATC +
Preference number: 1 (lower is better)
Translates to: PGLVTSPISVSDVHS*VTDKQGKRAGSELI
Trigger: GATTAGCTCGGACCCTGCTCTTTTTCCTTGCTTATCTGTTACTCAGCTATGAACATCTGACACAGAAATGGGAGAGGTTACCAGCCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR TCA 90 bp TGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGAATaGAAGAAAGCAAAAGATGTTGTGGCCAACATTTCCAACTGCTGG +
Preference number: 1 (lower is better)
Translates to: CMGHRIAHQGYEGLE*KKAKDVVANISNCW
Trigger: CCAGCAGTTGGAAATGTTGGCCACAACATCTTTTGCTTTCTTTCATTCCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR TCA 90 bp TTGGCTCCTTACTGCTTATTAATCTGTATTGTACACATGATGAAATaGAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCACA +
Preference number: 1 (lower is better)
Translates to: LAPYCLLICIVHMMK*SRSWESAFPLVTTT
Trigger: TGTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTGTACAATACAGATTAATAAGCAGTAAGGAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR CCA 90 bp ACTAGGAATTTTCCAAGCTATGTAAATGATTCTTGTGTGCACATGTaGTTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGG +
Preference number: 1 (lower is better)
Translates to: TRNFPSYVNDSCVHM*FRTTSSCQPHSGFR
Trigger: CCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAACCACATGTGCACACAAGAATCATTTACATAGCTTGGAAAATTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 90 bp AATGATGATTTTCAAAGGTACAAATGCATGGTCCTTAGGGTTGCATaGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGAATGAA +
Preference number: 1 (lower is better)
Translates to: NDDFQRYKCMVLRVA*DTGLHIRDMKVWNE
Trigger: TTCATTCCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGACCATGCATTTGTACCTTTGAAAATCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR TCA 90 bp GAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTTaGGGAATAAGGATGACAGAGGAGTTGAATGATGATGTAAAGGTT +
Preference number: 1 (lower is better)
Translates to: ENDFKSYFRDATEWV*GIRMTEELNDDVKV
Trigger: AACCTTTACATCATCATTCAACTCCTCTGTCATCCTTATTCCTCAAACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCCCGTGCCTAGGCAGTaGGGTGGCCCGCCACTGGAA +
Preference number: 2 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLPVPRQ*GGPPLE
Trigger: TTCCAGTGGCGGGCCACCTCACTGCCTAGGCACGGG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCCACCCTGGGCATGGTTaGGGTACATGGGGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTHPGHG*GTWGCV
Trigger: CACACACCCCCATGTACCCCAACCATGCCCAGGGTG...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCCCGCCACTGGAAGGTaGAGTCACATGTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYPATGR*SHMSMP
Trigger: GGGCATGGACATGTGACTGCACCTTCCAGTGGCGGG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 90 bp CCACTATGGCAGGGGTTCACGCCCTTGGCTGCACCCTGGACCTTCTaGGGGAGCTATAGAGAAATCCTGATAGCAGGCCTACCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: PLWQGFTPLAAPWTF*GSYREILIAGLPWR
Trigger: TCTCCAGGGTAGGCCTGCTATCAGGATTTCTCTATAGCTCCCCAAGAAGGTCCAGGGTGCAGCCAAGGGCGTGAACCCCTGCCATAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGCCCGTGCCTAGGCAGTaGGGTGGCCCGCCACTGGAA +
Preference number: 2 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWPVPRQ*GGPPLE
Trigger: TTCCAGTGGCGGGCCACCTCACTGCCTAGGCACGGG...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTCAAAGGATCACTGGGTaGAGTGGGCCCAGACCAACA +
Preference number: 2 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLQRITG*SGPRPT
Trigger: TGTTGGTCTGGGCCCACTGCACCCAGTGATCCTTTG...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACCACCCTGGGCATGGTTaGGGTACATGGGGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNHPGHG*GTWGCV
Trigger: CACACACCCCCATGTACCCCAACCATGCCCAGGGTG...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACCGTATCCTCGGTTCCTaGCCCAGGGCCTACCATGCT +
Preference number: 2 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNRILGS*PRAYHA
Trigger: AGCATGGTAGGCCCTGGGCCAGGAACCGAGGATACG...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTGCAACAGAGTGGGTTTaGGGAATAAGGATGACAGAG +
Preference number: 2 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLATEWV*GIRMTE
Trigger: CTCTGTCATCCTTATTCCTCAAACCCACTCTGTTGC...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGCCCGCCACTGGAAGGTaGAGTCACATGTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWPATGR*SHMSMP
Trigger: GGGCATGGACATGTGACTGCACCTTCCAGTGGCGGG...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 90 bp TCCCAGCCTAAGAGCCACCTGCTGCAGTTACCATGGCATGCTGAGTaGATGCACCAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGG +
Preference number: 2 (lower is better)
Translates to: SQPKSHLLQLPWHAE*MHQVAAAIRYYFQW
Trigger: CCATTGGAAATAATAACGGATGGCTGCTGCCACCTGGTGCATCAACTCAGCATGCCATGGTAACTGCAGCAGGTGGCTCTTAGGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR GCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGCCAACATTTCCAACTaGTGGTTGCTCCAGCACCCG +
Preference number: 2 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNANISN*WLLQHP
Trigger: CGGGTGCTGGAGCAACCAGCAGTTGGAAATGTTGGC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCACATCCCCACCCTCCTTaGGCTTCCAGACCAGATGGG +
Preference number: 2 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSHPHPP*ASRPDG
Trigger: CCCATCTGGTCTGGAAGCCCAAGGAGGGTGGGGATG...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGAGGTGGCCCGCCACTaGAAGGTGCAGTCACATGTC +
Preference number: 2 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALEVARH*KVQSHV
Trigger: GACATGTGACTGCACCTTCCAGTGGCGGGCCACCTC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCTGCACATCAGGGATATaGAGGTTTGGAATGAAAGAA +
Preference number: 2 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTCTSGI*RFGMKE
Trigger: TTCTTTCATTCCAAACCTTCATATCCCTGATGTGCA...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGCAGTCACATGTCCATaGCCCCAGGCACTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSAVTCP*PQALLL
Trigger: AAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGGCCAACATTTCCAACTaGTGGTTGCTCCAGCACCCG +
Preference number: 2 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWANISN*WLLQHP
Trigger: CGGGTGCTGGAGCAACCAGCAGTTGGAAATGTTGGC...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGTACATGGGGGTGTGTaGACGTGTGGGCAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSVHGGV*TCGQEH
Trigger: GTGCTCTTGCCCACACGTGCACACACCCCCATGTAC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTaGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTT +
Preference number: 2 (lower is better)
Translates to: HGALLEGHGIQVAAG*FLFPPQNCFALGYF
Trigger: AAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTTAATAAGCCATGTATaGCAGTTAAAGCACCCCACC +
Preference number: 2 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYLISHV*QLKHPT
Trigger: GGTGGGGTGCTTTAACTGTCATACATGGCTTATTAA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAACTTGGGATGTGCCAGTaGTTCCTCAACTTTGTTGTC +
Preference number: 2 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQLGMCQ*FLNFVV
Trigger: GACAACAAAGTTGAGGAACCACTGGCACATCCCAAG...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR GCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTGCAGTCACATGTCCATaGCCCCAGGCACTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: GRVENDFKSYFRDATEWVAVTCP*PQALLL
Trigger: AAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGC...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTTTCAAAGGTACAAATaGATGGTCCTTAGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYFQRYK*MVLRVA
Trigger: TGCAACCCTAAGGACCATGCATTTGTACCTTTGAAA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAAACATTTCCAACTGCTaGTTGCTCCAGCACCCGTGC +
Preference number: 2 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSNISNC*LLQHPC
Trigger: GCACGGGTGCTGGAGCAACCAGCAGTTGGAAATGTT...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACCGTATCCTCGGTTCCTaGCCCAGGGCCTACCATGCT +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNRILGS*PRAYHA
Trigger: AGCATGGTAGGCCCTGGGCCAGGAACCGAGGATACG...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAAGACTTTGCACTTACTaGAGTGCAACACTTGCACTT +
Preference number: 2 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQRLCTY*SATLAL
Trigger: AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCT...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAACTGCCAACTATGAATaGGTTAGCACAAAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQTANYE*VSTKWR
Trigger: TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGT...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAACATCCCCACCCTCCTTaGGCTTCCAGACCAGATGGG +
Preference number: 2 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKHPHPP*ASRPDG
Trigger: CCCATCTGGTCTGGAAGCCCAAGGAGGGTGGGGATG...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACAAAGGTACAAATGCATaGTCCTTAGGGTTGCATGGG +
Preference number: 2 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNKGTNA*SLGLHG
Trigger: CCCATGCAACCCTAAGGACCATGCATTTGTACCTTT...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGGACTTGGTTATGGATaGGAAAGACATTTTAGCCTT +
Preference number: 2 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQGLGYG*ERHFSL
Trigger: AAGGCTAAAATGTCTTTCCCATCCATAACCAAGTCC...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACACTACTGGAGGGCCATaGTATCCAAGTGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNTTGGP*YPSGCW
Trigger: CCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGT...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTTGTGGGTACCAAGCTTaGGGGCTCAGGGTCACTTCT +
Preference number: 2 (lower is better)
Translates to: AKYRLSNSTADEITQETFCGYQA*GLRVTS
Trigger: AGAAGTGACCCTGAGCCCTCAAGCTTGGTACCCACA...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGTTCACGCCCTTGGCTaGACCCTGGACCTTCTTGGG +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIVHALG*TLDLLG
Trigger: CCCAAGAAGGTCCAGGGTGCAGCCAAGGGCGTGAAC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTGTCCTTAGGGTTGCATaGGACACAGGATTGCACATC +
Preference number: 2 (lower is better)
Translates to: GRVENDFKSYFRDATEWVVLRVA*DTGLHI
Trigger: GATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTGCCATGGTATCCAAGTaGCTGCTGGGTTGTTCTTGT +
Preference number: 2 (lower is better)
Translates to: GRVENDFKSYFRDATEWVAMVSK*LLGCSC
Trigger: ACAAGAACAACCCAGCAGCCACTTGGATACCATGGC...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAAAAAATGGGAATGTTTaGTGGCTGAGAGGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSKNGNV*WLRGLW
Trigger: CCAGAGACCTCTCAGCCACCAAACATTCCCATTTTT...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAAGAAACAGATGGCTGTaGTGTAATGCAAGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSRNRWL*CNASSE
Trigger: CTCAGAGCTTGCATTACACCACAGCCATCTGTTTCT...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTACCCATAGGAGGACTTaGTTATGGATGGGAAAGACA +
Preference number: 2 (lower is better)
Translates to: VGADFALTAVQHLHFNFPTHRRT*LWMGKT
Trigger: TGTCTTTCCCATCCATAACCAAGTCCTCCTATGGGT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCACCCATAGGAGGACTTaGTTATGGATGGGAAAGACA +
Preference number: 2 (lower is better)
Translates to: IVVSVRLPLLDMLINVECTHRRT*LWMGKT
Trigger: TGTCTTTCCCATCCATAACCAAGTCCTCCTATGGGT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGTCCTTAGGGTTGCATaGGACACAGGATTGCACATC +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNVLRVA*DTGLHI
Trigger: GATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGATCACTGGGTGCAGTaGGCCCAGACCAACAGAATT +
Preference number: 2 (lower is better)
Translates to: AKYRLSNSTADEITQETFDHWVQ*AQTNRI
Trigger: AATTCTGTTGGTCTGGGCCCACTGCACCCAGTGATC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTAACAGGTTCAGGAGATaGGATGGAAAACATAAGGCA +
Preference number: 2 (lower is better)
Translates to: VGADFALTAVQHLHFNFPNRFRR*DGKHKA
Trigger: TGCCTTATGTTTTCCATCTCATCTCCTGAACCTGTT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR TCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGCAACAGAGTGGGTTTaGGGAATAAGGATGACAGAG +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNATEWV*GIRMTE
Trigger: CTCTGTCATCCTTATTCCTCAAACCCACTCTGTTGC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTCAAAGGATCACTGGGTaGAGTGGGCCCAGACCAACA +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIQRITG*SGPRPT
Trigger: TGTTGGTCTGGGCCCACTGCACCCAGTGATCCTTTG...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGCCAAGAGCCTGGGGTaGAGCAGGAGTACAGTACTT +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIAKSLG*SRSTVL
Trigger: AAGTACTGTACTCCTGCTGCACCCCAGGCTCTTGGC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCACTGCCAACTATGAATaGGTTAGCACAAAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: IVVSVRLPLLDMLINVECTANYE*VSTKWR
Trigger: TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCAAGAAGTGGGGACTTTaGGTTTATGTACCCATAGGA +
Preference number: 2 (lower is better)
Translates to: IVVSVRLPLLDMLINVECKKWGL*VYVPIG
Trigger: TCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTGGGTTGAGATTTCTGTaGGTGGTGACATATGATAGC +
Preference number: 2 (lower is better)
Translates to: GRVENDFKSYFRDATEWVGLRFL*VVTYDS
Trigger: GCTATCATATGTCACCACCCACAGAAATCTCAACCC...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 90 bp CAAAGGTACAAATGCATGGTCCTTAGGGTTGCATGGGACACAGGATaGCACATCAGGGATATGAAGGTTTGGAATGAAAGAAAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: QRYKCMVLRVAWDTG*HIRDMKVWNERKQK
Trigger: CTTTTGCTTTCTTTCATTCCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGACCATGCATTTGTACCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 90 bp ATCCTCTTTTTAAGACGACTGAGTGTGTTGCAGCTGAGTGAATCTTaGGGACTCGGGAAAAATAATCCACACAGACATTGCAAATCCCTG +
Preference number: 2 (lower is better)
Translates to: ILFLRRLSVLQLSES*GLGKNNPHRHCKSL
Trigger: CAGGGATTTGCAATGTCTGTGTGGATTATTTTTCCCGAGTCCCAAAGATTCACTCAGCTGCAACACACTCAGTCGTCTTAAAAAGAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACAAGGCAGAGGCAGGATaGGAAGAAGAAAATATGGGA +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNKAEAG*EEENMG
Trigger: TCCCATATTTTCTTCTTCTCATCCTGCCTCTGCCTT...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGACTGCCAACTATGAATaGGTTAGCACAAAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMTANYE*VSTKWR
Trigger: TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGT...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTAACATTTCCAACTGCTaGTTGCTCCAGCACCCGTGC +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPINISNC*LLQHPC
Trigger: GCACGGGTGCTGGAGCAACCAGCAGTTGGAAATGTT...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTTTCATGGGGCACTACTaGAGGGCCATGGTATCCAAG +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIFMGHY*RAMVSK
Trigger: CTTGGATACCATGGCCCTCCAGTAGTGCCCCATGAA...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTTTCTGGAAACAAAGCTaGCAGGCTGATGGTTCTTAC +
Preference number: 2 (lower is better)
Translates to: AKYRLSNSTADEITQETFFWKQS*QADGSY
Trigger: GTAAGAACCATCAGCCTGTCAGCTTTGTTTCCAGAA...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGCGTATGTATGTGAATaGATTCATGGGGCACTACTG +
Preference number: 2 (lower is better)
Translates to: AKYRLSNSTADEITQETFAYVCE*IHGALL
Trigger: CAGTAGTGCCCCATGAATGCATTCACATACATACGC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTATAGTAGCAGTCTTTTaGAGTATGTGTTTAACTGCC +
Preference number: 2 (lower is better)
Translates to: VGADFALTAVQHLHFNFPIVAVF*SMCLTA
Trigger: GGCAGTTAAACACATACTCCAAAAGACTGCTACTAT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTAAAGGTACAAATGCATaGTCCTTAGGGTTGCATGGG +
Preference number: 2 (lower is better)
Translates to: AKYRLSNSTADEITQETFKGTNA*SLGLHG
Trigger: CCCATGCAACCCTAAGGACCATGCATTTGTACCTTT...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTGTTTACAGAAGGAAATaGCGGTCAACTGTAGCTAAA +
Preference number: 2 (lower is better)
Translates to: GRVENDFKSYFRDATEWVVYRRK*RSTVAK
Trigger: TTTAGCTACAGTTGACCGCCATTTCCTTCTGTAAAC...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGGGAGTATAAGAGAATaGGAAGGTTTGAGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNGSIRE*EGLREK
Trigger: CTTTTCTCTCAAACCTTCTCATTCTCTTATACTCCC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTACAAAGCTGACAGGCTaGTGGTTCTTACTGACCTGT +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPITKLTG*WFLLTC
Trigger: ACAGGTCAGTAAGAACCATCAGCCTGTCAGCTTTGT...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACTCAGATGTTCATAGCTaGGTAACAGATAAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNSDVHS*VTDKQG
Trigger: TCCTTGCTTATCTGTTACTCAGCTATGAACATCTGA...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACAAGAAAACAGATTTGTaGTGTACACACAGCAGGACA +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNKKTDL*CTHSRT
Trigger: TGTCCTGCTGTGTGTACATCACAAATCTGTTTTCTT...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR GCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACTTTCAAAGGTACAAATaGATGGTCCTTAGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: GLSTGERNSSSDASVCKNFQRYK*MVLRVA
Trigger: TGCAACCCTAAGGACCATGCATTTGTACCTTTGAAA...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTGGACTTGGTTATGGATaGGAAAGACATTTTAGCCTT +
Preference number: 2 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIGLGYG*ERHFSL
Trigger: AAGGCTAAAATGTCTTTCCCATCCATAACCAAGTCC...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTCTTGGGATGTGCCAGTaGTTCCTCAACTTTGTTGTC +
Preference number: 2 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSLGMCQ*FLNFVV
Trigger: GACAACAAAGTTGAGGAACCACTGGCACATCCCAAG...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR GCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGCGTATGTATGTGAATaGATTCATGGGGCACTACTG +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIAYVCE*IHGALL
Trigger: CAGTAGTGCCCCATGAATGCATTCACATACATACGC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATGGACTTGGTTATGGATaGGAAAGACATTTTAGCCTT +
Preference number: 2 (lower is better)
Translates to: VIGMNVQPNLETTELHAYGLGYG*ERHFSL
Trigger: AAGGCTAAAATGTCTTTCCCATCCATAACCAAGTCC...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTAGAAACAGATGGCTGTaGTGTAATGCAAGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIRNRWL*CNASSE
Trigger: CTCAGAGCTTGCATTACACCACAGCCATCTGTTTCT...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTAACAGGTTCAGGAGATaGGATGGAAAACATAAGGCA +
Preference number: 2 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSNRFRR*DGKHKA
Trigger: TGCCTTATGTTTTCCATCTCATCTCCTGAACCTGTT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR TCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTTTAATAAGCCATGTATaGCAGTTAAAGCACCCCACC +
Preference number: 2 (lower is better)
Translates to: LFPIYSAAVVTLSSICPILISHV*QLKHPT
Trigger: GGTGGGGTGCTTTAACTGTCATACATGGCTTATTAA...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAACTGCCAACTATGAATaGGTTAGCACAAAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSTANYE*VSTKWR
Trigger: TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGT...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTAAGAAGTGGGGACTTTaGGTTTATGTACCCATAGGA +
Preference number: 2 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSKKWGL*VYVPIG
Trigger: TCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAATGTGCAGCCAAATTTaGAAACCACTGAGCTACATG +
Preference number: 2 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSMCSQI*KPLSYM
Trigger: CATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACAT...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTGGACTTGGTTATGGATaGGAAAGACATTTTAGCCTT +
Preference number: 2 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSGLGYG*ERHFSL
Trigger: AAGGCTAAAATGTCTTTCCCATCCATAACCAAGTCC...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR TCA 72 bp CAACTGCTGGTTGCTCCAGCACCCGTGCCTAGGCAGTaGGGTGGCCCGCCACTGGAAGGTGCAGTCACATGT +
Preference number: 3 (lower is better)
Translates to: QLLVAPAPVPRQ*GGPPLEGAVTC
Trigger: ACATGTGACTGCACCTTCCAGTGGCGGGCCACCTCACTGCCTAGGCACGGGTGCTGGAGCAACCAGCAGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 72 bp AGTGCCAAGAGGCTACCAGAACATGGGGCAGGTGGCTaGTGTTGGTGTCCCAGCCTAAGAGCCACCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SAKRLPEHGAGG*CWCPSLRATCC
Trigger: GCAGCAGGTGGCTCTTAGGCTGGGACACCAACACCAGCCACCTGCCCCATGTTCTGGTAGCCTCTTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR CCA 72 bp ACATACGCCCAGAGGGCCAGTGGCTCATGTGGGATGTaGGTACCAAGCTTGAGGGCTCAGGGTCACTTCTGG +
Preference number: 3 (lower is better)
Translates to: TYAQRASGSCGM*VPSLRAQGHFW
Trigger: CCAGAAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCCCTCTGGGCGTATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 72 bp CTCTTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTaGACAAGCTCACCTGGGAACCAAGGCAGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: LLSIEGALEAWV*TSSPGNQGRGR
Trigger: CCTGCCTCTGCCTTGGTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 72 bp GGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTaGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGC +
Preference number: 3 (lower is better)
Translates to: GTTGGPWYPSGC*VVLVSSSELFR
Trigger: GCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR TCA 72 bp AGAGCCACCTGCTGCAGTTACCATGGCATGCTGAGTTaGTGCACCAGGTGGCAGCAGCCATCCGTTATTATT +
Preference number: 3 (lower is better)
Translates to: RATCCSYHGMLS*CTRWQQPSVII
Trigger: AATAATAACGGATGGCTGCTGCCACCTGGTGCATCAACTCAGCATGCCATGGTAACTGCAGCAGGTGGCTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR GCA 72 bp TGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTaGTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTT +
Preference number: 3 (lower is better)
Translates to: WGTTGGPWYPSG*WVVLVSSSELF
Trigger: AAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 72 bp AAAGCAAAAGATGTTGTGGCCAACATTTCCAACTGCTaGTTGCTCCAGCACCCGTGCCTAGGCAGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: KAKDVVANISNC*LLQHPCLGSEV
Trigger: CACCTCACTGCCTAGGCACGGGTGCTGGAGCAACCAGCAGTTGGAAATGTTGGCCACAACATCTTTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 72 bp TTCATGGGGCACTACTGGAGGGCCATGGTATCCAAGTaGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACT +
Preference number: 3 (lower is better)
Translates to: FMGHYWRAMVSK*LLGCSCFLLRT
Trigger: AGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGCTGCTGGGTTGTTCTaGTTTCCTCCTCAGAACTGT +
Preference number: 3 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNAAGLF*FPPQNC
Trigger: ACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTTGCAGGGAAGAGTGTaGCTTAATAAGCCATGTATG +
Preference number: 3 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYLQGRV*LNKPCM
Trigger: CATACATGGCTTATTAAGCAACACTCTTCCCTGCAA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR TCA 72 bp GGCTCAGGGTCACTTCTGGAAACAAAGCTGACAGGCTaGTGGTTCTTACTGACCTGTCATAGCTTCCTCAGC +
Preference number: 3 (lower is better)
Translates to: GSGSLLETKLTG*WFLLTCHSFLS
Trigger: GCTGAGGAAGCTATGACAGGTCAGTAAGAACCATCAGCCTGTCAGCTTTGTTTCCAGAAGTGACCCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 72 bp ATGCGTATGTATGTGAATGCATTCATGGGGCACTACTaGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGT +
Preference number: 3 (lower is better)
Translates to: MRMYVNAFMGHY*RAMVSKWLLGC
Trigger: ACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATGAATGCATTCACATACATACGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR TCA 72 bp AGTTGCAGGGAAGAGTGTTGCTTAATAAGCCATGTATaGCAGTTAAAGCACCCCACCCTGGGCATGGTTGGG +
Preference number: 3 (lower is better)
Translates to: SCREECCLISHV*QLKHPTLGMVG
Trigger: CCCAACCATGCCCAGGGTGGGGTGCTTTAACTGTCATACATGGCTTATTAAGCAACACTCTTCCCTGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGATAGTAGCAGTCTTTaGGAGTATGTGTTTAACTGC +
Preference number: 3 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQDSSSL*EYVFNC
Trigger: GCAGTTAAACACATACTCCAAAAGACTGCTACTATC...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CAA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGCATGGTCCTTAGGGTaGCATGGGACACAGGATTGC +
Preference number: 3 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKAWSLG*HGTQDC
Trigger: GCAATCCTGTGTCCCATGCAACCCTAAGGACCATGC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTAAAGAAGTGGGGACTTaGGGTTTATGTACCCATAGG +
Preference number: 3 (lower is better)
Translates to: VGADFALTAVQHLHFNFPKEVGT*GLCTHR
Trigger: CCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CAA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGCATGGGACACAGGATaGCACATCAGGGATATGAAG +
Preference number: 3 (lower is better)
Translates to: GLSTGERNSSSDASVCKNAWDTG*HIRDMK
Trigger: CTTCATATCCCTGATGTGCAATCCTGTGTCCCATGC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTAATGTGCAGCCAAATTaGGAAACCACTGAGCTACAT +
Preference number: 3 (lower is better)
Translates to: VGADFALTAVQHLHFNFPNVQPN*ETTELH
Trigger: ATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CAA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGCATGGGACACAGGATaGCACATCAGGGATATGAAG +
Preference number: 3 (lower is better)
Translates to: AKYRLSNSTADEITQETFAWDTG*HIRDMK
Trigger: CTTCATATCCCTGATGTGCAATCCTGTGTCCCATGC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGCATGGTCCTTAGGGTaGCATGGGACACAGGATTGC +
Preference number: 3 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIAWSLG*HGTQDC
Trigger: GCAATCCTGTGTCCCATGCAACCCTAAGGACCATGC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR GCA 72 bp TCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTaGAACACTTGCACTTTAATTTTCCTCCAACTGTCT +
Preference number: 3 (lower is better)
Translates to: SLWWGQTLHLLQ*NTCTLIFLQLS
Trigger: AGACAGTTGGAGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR CCA 72 bp TTTCAAAGGTACAAATGCATGGTCCTTAGGGTTGCATaGGACACAGGATTGCACATCAGGGATATGAAGGTT +
Preference number: 3 (lower is better)
Translates to: FQRYKCMVLRVA*DTGLHIRDMKV
Trigger: AACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGACCATGCATTTGTACCTTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGAAAGAAGTGGGGACTTaGGGTTTATGTACCCATAGG +
Preference number: 3 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLKEVGT*GLCTHR
Trigger: CCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR CCA 72 bp TTTCCAAGCTATGTAAATGATTCTTGTGTGCACATGTaGTTTAGAACCACCTCATCATGTCAGCCCCACTCT +
Preference number: 3 (lower is better)
Translates to: FPSYVNDSCVHM*FRTTSSCQPHS
Trigger: AGAGTGGGGCTGACATGATGAGGTGGTTCTAAACCACATGTGCACACAAGAATCATTTACATAGCTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGAATGTGCAGCCAAATTaGGAAACCACTGAGCTACAT +
Preference number: 3 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLNVQPN*ETTELH
Trigger: ATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTATTAGAGCAAATACATaGGCAATACAGCTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: VGADFALTAVQHLHFNFPIRANT*AIQLLL
Trigger: CAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAAT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTTTGACCATTCTGGGGTaGAGATTTCTGTGGGTGGTG +
Preference number: 3 (lower is better)
Translates to: LFPIYSAAVVTLSSICPILTILG*RFLWVV
Trigger: CACCACCCACAGAAATCTCAACCCCAGAATGGTCAA...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 72 bp AGAATTATTTTGACCATTCTGGGGTTGAGATTTCTGTaGGTGGTGACATATGATAGCAAGTTTACTGGGCCA +
Preference number: 3 (lower is better)
Translates to: RIILTILGLRFL*VVTYDSKFTGP
Trigger: TGGCCCAGTAAACTTGCTATCATATGTCACCACCCACAGAAATCTCAACCCCAGAATGGTCAAAATAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGGATAGTAGCAGTCTTTaGGAGTATGTGTTTAACTGC +
Preference number: 3 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWDSSSL*EYVFNC
Trigger: GCAGTTAAACACATACTCCAAAAGACTGCTACTATC...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CAA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACAGGATGACAGAGGAGTaGAATGATGATGTAAAGGTT +
Preference number: 3 (lower is better)
Translates to: GLSTGERNSSSDASVCKNRMTEE*NDDVKV
Trigger: AACCTTTACATCATCATTCAACTCCTCTGTCATCCT...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTAGCAGGACAACTGTTTaGGATGAACTCATTCCAACT +
Preference number: 3 (lower is better)
Translates to: AKYRLSNSTADEITQETFSRTTV*DELIPT
Trigger: AGTTGGAATGAGTTCATCCAAAACAGTTGTCCTGCT...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGAGCATGATTTTCAGTaGCTAAATATAGGCTTAGCA +
Preference number: 3 (lower is better)
Translates to: GLSTGERNSSSDASVCKNEHDFQ*LNIGLA
Trigger: TGCTAAGCCTATATTTAGCAACTGAAAATCATGCTC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTATACTCACCCTCGGTTaGTCTACAGGGGAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIILTLG*STGERN
Trigger: ATTTCTTTCCCCTGTAGACAAACCGAGGGTGAGTAT...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CCA 72 bp TGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATaGGAAAGACATTTTAGCCTTGTACAAAAATCTGAA +
Preference number: 3 (lower is better)
Translates to: WVYVPIGGLGYG*ERHFSLVQKSE
Trigger: TTCAGATTTTTGTACAAGGCTAAAATGTCTTTCCCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR-3UTR CAA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTGATAGTAGCAGTCTTTaGGAGTATGTGTTTAACTGC +
Preference number: 3 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSDSSSL*EYVFNC
Trigger: GCAGTTAAACACATACTCCAAAAGACTGCTACTATC...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
3UTR-3UTR CAA 90 bp TTTATTTCCACAGGGCTCACAACAACATTAAACCAGGATGCTTATGTTCTTAAGAATATGAGTGAGGATTaGCTTTCTCCATTAGAGCAT +
Preference number: 3 (lower is better)
Translates to: FISTGLTTTLNQDAYVLKNMSED*LSPLEH
Trigger: ATGCTCTAATGGAGAAAGCAAATCCTCACTCATATT...CTTAAGAACATAAGCATCCTGGTTTAATGTTGTTGTGAGCCCTGTGGAAATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297135.9
CDS-3UTR TCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCCCCGTGCCTAGGCAGTaGGGTGGCCCGCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTPVPRQ*GGPPLE
Trigger: TTCCAGTGGCGGGCCACCTCACTGCCTAGGCACGGG...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCAGGGTCCGAGTGCTCTaGGCCCAGCGCACCGAGGGA +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTRVRVL*AQRTEG
Trigger: TCCCTCGGTGCGCTGGGCGCAGAGCACTCGGACCCT...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCCGCGCCCCCTGGGCTaGCGTCGTGCCCTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYPRPLG*RRALAK
Trigger: CTTGGCTAGGGCACGACGCCAGCCCAGGGGGCGCGG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGGCCCACCTGGCGAACTaGCTCTCAGCCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLAHLAN*LSARAW
Trigger: CCAGGCGCGGGCTGAGAGTCAGTTCGCCAGGTGGGC...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTAGGGTCCGAGTGCTCTaGGCCCAGCGCACCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLRVRVL*AQRTEG
Trigger: TCCCTCGGTGCGCTGGGCGCAGAGCACTCGGACCCT...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCCAGGTACTCGAGCAGTaGGCGCCCAGGGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIQVLEQ*APRVRV
Trigger: CACTCGGACCCTGGGCGCCCACTGCTCGAGTACCTG...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGCTCCGCCCAGGTGGTaGCGCAGAATCCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQAPPRW*RRIPAP
Trigger: CGGCGCCGGGATTCTGCGTCACCACCTGGGCGGAGC...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTGGCTCCAGGCCCACCTaGCGAACTGACTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLGSRPT*RTDSQP
Trigger: GGGCTGAGAGTCAGTTCGCCAGGTGGGCCTGGAGCC...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTCAGCTACAGCGACGCTaGCGCCGCCACCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLQLQRR*RRHLPC
Trigger: ACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTG...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACCGCCCAGGGTCCGAGTaGTCTGCGCCCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNRPGSE*SAPSAP
Trigger: CGGTGCGCTGGGCGCAGAGCACTCGGACCCTGGGCG...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCAGGTACTCGAGCAGTaGGCGCCCAGGGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLQVLEQ*APRVRV
Trigger: CACTCGGACCCTGGGCGCCCACTGCTCGAGTACCTG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCCATCCCCACCCTCCTTaGGCTTCCAGACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIHPHPP*ASRPDG
Trigger: CCCATCTGGTCTGGAAGCCCAAGGAGGGTGGGGATG...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCAGGGGTTCACGCCCTTaGCTGCACCCTGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIRGSRP*LHPGPS
Trigger: AGAAGGTCCAGGGTGCAGCCAAGGGCGTGAACCCCT...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCTCCCCCTCTCACAGCTaGCTGGGAAGGCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTSPSHS*LGRLSQ
Trigger: TTGACTCAGCCTTCCCAGTCAGCTGTGAGAGGGGGA...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCTGGTCATCCAGCCACTaGGAGAAGCGTGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTWSSSH*EKRVWD
Trigger: GTCCCACACACGCTTCTCTCAGTGGCTGGATGACCA...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTTCCCGGACTGTAGCTaGAGCCGCTCCAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYFPDCS*SRSRAS
Trigger: CGAGGCTCTGGAGCGGCTGCAGCTACAGTCCGGGAA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCCTGGGCTGGCGTCGTaGCCTAGCCAAGGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYPGLAS*PSQGEG
Trigger: ACCTTCTCCTTGGCTAGGGCACGACGCCAGCCCAGG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCTGCCCCCAGAGCACCTaGCTTTACCTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTCPQST*LYLMRR
Trigger: CCTCCTCATCAGGTAAAGCCAGGTGCTCTGGGGGCA...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCGCCCAGAGGGCCAGTaGCTCATGTGGGATGTGGGT +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYRPEGQ*LMWDVG
Trigger: ACCCACATCCCACATGAGCCACTGGCCCTCTGGGCG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTTCCCCCTCTCACAGCTaGCTGGGAAGGCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLSPSHS*LGRLSQ
Trigger: TTGACTCAGCCTTCCCAGTCAGCTGTGAGAGGGGGA...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTTGGTCATCCAGCCACTaGGAGAAGCGTGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLWSSSH*EKRVWD
Trigger: GTCCCACACACGCTTCTCTCAGTGGCTGGATGACCA...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCTGTGGGTACCAAGCTTaGGGGCTCAGGGTCACTTCT +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFICGYQA*GLRVTS
Trigger: AGAAGTGACCCTGAGCCCTCAAGCTTGGTACCCACA...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCTTCCATGTTGGCAGGTaGCGGGTTGATGTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIFHVGR*RVDVVS
Trigger: GCTGACGACATCAACCCGGCACCTGCCAACATGGAA...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTCGCCCAGGGTCCGAGTaGTCTGCGCCCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALRPGSE*SAPSAP
Trigger: CGGTGCGCTGGGCGCAGAGCACTCGGACCCTGGGCG...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGGCTCCAGGCCCACCTaGCGAACTGACTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQGSRPT*RTDSQP
Trigger: GGGCTGAGAGTCAGTTCGCCAGGTGGGCCTGGAGCC...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCATCCCCACCCTCCTTaGGCTTCCAGACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLHPHPP*ASRPDG
Trigger: CCCATCTGGTCTGGAAGCCCAAGGAGGGTGGGGATG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCGTATCCTCGGTTCCTaGCCCAGGGCCTACCATGCT +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLRILGS*PRAYHA
Trigger: AGCATGGTAGGCCCTGGGCCAGGAACCGAGGATACG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCGTATCCTCGGTTCCTaGCCCAGGGCCTACCATGCT +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYRILGS*PRAYHA
Trigger: AGCATGGTAGGCCCTGGGCCAGGAACCGAGGATACG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCAGAGGCCCAATCACCTaGCTTGCATCTCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTRGPIT*LASPCV
Trigger: CACACAAGGAGATGCAAGTCAGGTGATTGGGCCTCT...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGGCTCCGCCCAGGTGGTaGCGCAGAATCCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWAPPRW*RRIPAP
Trigger: CGGCGCCGGGATTCTGCGTCACCACCTGGGCGGAGC...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTGCCAAGAGCCTGGGGTaGAGCAGGAGTACAGTACTT +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLAKSLG*SRSTVL
Trigger: AAGTACTGTACTCCTGCTGCACCCCAGGCTCTTGGC...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTCTAACAAAGGATCACTaGGTGCAGTGGGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLLTKDH*VQWAQT
Trigger: GGTCTGGGCCCACTGCACCCAGTGATCCTTTGTTAG...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCGGAAGAGCAGAGGTCTaGATGATCTCAGCATCCGAT +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIGRAEV*MISASD
Trigger: ATCGGATGCTGAGATCATTCAGACCTCTGCTCTTCC...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTGCCCACCTGGCGAACTaGCTCTCAGCCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPAHLAN*LSARAW
Trigger: CCAGGCGCGGGCTGAGAGTCAGTTCGCCAGGTGGGC...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTGCTCCGCCCAGGTGGTaGCGCAGAATCCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVAPPRW*RRIPAP
Trigger: CGGCGCCGGGATTCTGCGTCACCACCTGGGCGGAGC...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCTCCGCCCAGGTGGTaGCGCAGAATCCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMAPPRW*RRIPAP
Trigger: CGGCGCCGGGATTCTGCGTCACCACCTGGGCGGAGC...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTGTGGGTACCAAGCTTaGGGGCTCAGGGTCACTTCT +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYCGYQA*GLRVTS
Trigger: AGAAGTGACCCTGAGCCCTCAAGCTTGGTACCCACA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCTGTGTGGGACCACTCTaGCCTCTGGAAAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTCVGPL*PLERRF
Trigger: AAATCTCCTTTCCAGAGGGCAGAGTGGTCCCACACA...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCAAAGGATCACTGGGTaGAGTGGGCCCAGACCAACA +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYQRITG*SGPRPT
Trigger: TGTTGGTCTGGGCCCACTGCACCCAGTGATCCTTTG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCAGTATTTCCTGGGGTTaGCATGGTAGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTSISWG*HGRSSR
Trigger: CCTGGACGATCTACCATGCCAACCCCAGGAAATACT...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTCCGCGCCCCCTGGGCTaGCGTCGTGCCCTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVPRPLG*RRALAK
Trigger: CTTGGCTAGGGCACGACGCCAGCCCAGGGGGCGCGG...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGCCGCGCCCCCTGGGCTaGCGTCGTGCCCTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMPRPLG*RRALAK
Trigger: CTTGGCTAGGGCACGACGCCAGCCCAGGGGGCGCGG...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639557.3
3UTR CAA 72 bp GCAAAAGATGTTGTGGCCAACATTTCCAACTGCTGGTaGCTCCAGCACCCGTGCCTAGGCAGTGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AKDVVANISNCW*LQHPCLGSEVA
Trigger: GGCCACCTCACTGCCTAGGCACGGGTGCTGGAGCAACCAGCAGTTGGAAATGTTGGCCACAACATCTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 72 bp CAGGGGTTCACGCCCTTGGCTGCACCCTGGACCTTCTaGGGGAGCTATAGAGAAATCCTGATAGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: QGFTPLAAPWTF*GSYREILIAGL
Trigger: TAGGCCTGCTATCAGGATTTCTCTATAGCTCCCCAAGAAGGTCCAGGGTGCAGCCAAGGGCGTGAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCAGTTCTCTGTCCAACTaGCTGATTCCTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTSSLSN*LIPWAS
Trigger: ACTTGCCCAAGGAATCAGTCAGTTGGACAGAGAACT...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCAGTAGGCGCTTAGCTTaGTTTTCCACTTCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFISRRLA*FSTSSR
Trigger: CCGACTTGAAGTGGAAAATCAAGCTAAGCGCCTACT...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCACAAAGCTGACAGGCTaGTGGTTCTTACTGACCTGT +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFITKLTG*WFLLTC
Trigger: ACAGGTCAGTAAGAACCATCAGCCTGTCAGCTTTGT...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGTTCCCGGACTGTAGCTaGAGCCGCTCCAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWFPDCS*SRSRAS
Trigger: CGAGGCTCTGGAGCGGCTGCAGCTACAGTCCGGGAA...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTTCTCTACTTCCCCCTTaGAGTTGTCCTTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLSLLPP*SCPWSL
Trigger: GAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGA...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCGCCCAGGGTCCGAGTaGTCTGCGCCCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLRPGSE*SAPSAP
Trigger: CGGTGCGCTGGGCGCAGAGCACTCGGACCCTGGGCG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR GCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACTCCAGACCAGATGGGTaGCCCCAGAGCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNSRPDG*PQSTWL
Trigger: AAGCCAGGTGCTCTGGGGGCACCCATCTGGTCTGGA...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGTTCACGCCCTTGGCTaGACCCTGGACCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNVHALG*TLDLLG
Trigger: CCCAAGAAGGTCCAGGGTGCAGCCAAGGGCGTGAAC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTAGCTGCAGTATTTCCTaGGGTTGGCATGGTAGATCG +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLSCSIS*GWHGRS
Trigger: CGATCTACCATGCCAACCCCAGGAAATACTGCAGCT...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCGACCACTCTGCCCTCTaGAAAGGAGATTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIDHSAL*KGDFSS
Trigger: TGAACTGAAATCTCCTTTCCAGAGGGCAGAGTGGTC...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGGTGGGCACCGGAACGTaGCCGCAGCGCTTATCTGTG +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWVGTGT*PQRLSV
Trigger: CACAGATAAGCGCTGCGGCCACGTTCCGGTGCCCAC...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTTCATGGGGCACTACTaGAGGGCCATGGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYFMGHY*RAMVSK
Trigger: CTTGGATACCATGGCCCTCCAGTAGTGCCCCATGAA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 72 bp CTGAAATATGACCCACTATGGCAGGGGTTCACGCCCTaGGCTGCACCCTGGACCTTCTTGGGGAGCTATAGA +
Preference number: 4 (lower is better)
Translates to: LKYDPLWQGFTP*AAPWTFLGSYR
Trigger: TCTATAGCTCCCCAAGAAGGTCCAGGGTGCAGCCAAGGGCGTGAACCCCTGCCATAGTGGGTCATATTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTAGTTCTCTGTCCAACTaGCTGATTCCTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLSSLSN*LIPWAS
Trigger: ACTTGCCCAAGGAATCAGTCAGTTGGACAGAGAACT...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAGCCCACCTGGCGAACTaGCTCTCAGCCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLAHLAN*LSARAW
Trigger: CCAGGCGCGGGCTGAGAGTCAGTTCGCCAGGTGGGC...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGCTCCGCCCAGGTGGTaGCGCAGAATCCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKAPPRW*RRIPAP
Trigger: CGGCGCCGGGATTCTGCGTCACCACCTGGGCGGAGC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCATCCTAACTGAAATATaGCCCACTATGGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIILTEI*PTMAGV
Trigger: AACCCCTGCCATAGTGGGTCATATTTCAGTTAGGAT...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCTTCTGGAAACAAAGCTaGCAGGCTGATGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIFWKQS*QADGSY
Trigger: GTAAGAACCATCAGCCTGTCAGCTTTGTTTCCAGAA...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGTGTGTTGCAGCTGAGTaGATCTTTGGGACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLCVAAE*IFGTRE
Trigger: TTCCCGAGTCCCAAAGATTCACTCAGCTGCAACACA...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCTTTTTGCTAAGGGCATaGAGGTTCTGGAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTFLLRA*RFWNQP
Trigger: TGGCTGATTCCAGAACCTTCATGCCCTTAGCAAAAA...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCACAGCTACAGCGACGCTaGCGCCGCCACCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSQLQRR*RRHLPC
Trigger: ACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTG...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGTCTCTACTTCCCCCTTaGAGTTGTCCTTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLSLLPP*SCPWSL
Trigger: GAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGA...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATGGCTACATGTTCACTTaGCTGGAAGAGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYGYMFT*LEEQRS
Trigger: AGACCTCTGCTCTTCCAGGCAAGTGAACATGTAGCC...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAATTCCATGTTGGCAGGTaGCGGGTTGATGTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQFHVGR*RVDVVS
Trigger: GCTGACGACATCAACCCGGCACCTGCCAACATGGAA...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTCCTGGGCTGGCGTCGTaGCCTAGCCAAGGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALPGLAS*PSQGEG
Trigger: ACCTTCTCCTTGGCTAGGGCACGACGCCAGCCCAGG...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGCAGTCACATGTCCATaGCCCCAGGCACTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNAVTCP*PQALLL
Trigger: AAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCGCGTATGTATGTGAATaGATTCATGGGGCACTACTG +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIAYVCE*IHGALL
Trigger: CAGTAGTGCCCCATGAATGCATTCACATACATACGC...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGTGGGCACCGGAACGTaGCCGCAGCGCTTATCTGTG +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSVGTGT*PQRLSV
Trigger: CACAGATAAGCGCTGCGGCCACGTTCCGGTGCCCAC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCAAAGGTACAAATGCATaGTCCTTAGGGTTGCATGGG +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTKGTNA*SLGLHG
Trigger: CCCATGCAACCCTAAGGACCATGCATTTGTACCTTT...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCAAAAATGGGAATGTTTaGTGGCTGAGAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTKNGNV*WLRGLW
Trigger: CCAGAGACCTCTCAGCCACCAAACATTCCCATTTTT...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCGGGTTGAGATTTCTGTaGGTGGTGACATATGATAGC +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTGLRFL*VVTYDS
Trigger: GCTATCATATGTCACCACCCACAGAAATCTCAACCC...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 72 bp AGGATCACTGGGTGCAGTGGGCCCAGACCAACAGAATaGGGATCCCCTGGGAGAGTTGAGAATGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: RITGCSGPRPTE*GSPGRVENDFK
Trigger: CTTGAAGTCATTCTCAACTCTCCCAGGGGATCCCAATTCTGTTGGTCTGGGCCCACTGCACCCAGTGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCTCTGTCCAACTGACTaGTTCCTTGGGCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLLCPTD*FLGQVL
Trigger: CAAAACTTGCCCAAGGAATCAGTCAGTTGGACAGAG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGAGTAGGCGCTTAGCTTaGTTTTCCACTTCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLSRRLA*FSTSSR
Trigger: CCGACTTGAAGTGGAAAATCAAGCTAAGCGCCTACT...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGCCCACCTGGCGAACTaGCTCTCAGCCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKAHLAN*LSARAW
Trigger: CCAGGCGCGGGCTGAGAGTCAGTTCGCCAGGTGGGC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTTGGCAGGTGCCGGGTTaGTGTCGTCAGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALWQVPG*CRQQQN
Trigger: GTTCTGCTGCTGACGACATCAACCCGGCACCTGCCA...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCATGGCAGGTGCCGGGTTaGTGTCGTCAGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSWQVPG*CRQQQN
Trigger: GTTCTGCTGCTGACGACATCAACCCGGCACCTGCCA...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTAAGGCAGAGGCAGGATaGGAAGAAGAAAATATGGGA +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLKAEAG*EEENMG
Trigger: TCCCATATTTTCTTCTTCTCATCCTGCCTCTGCCTT...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCGTCTTTCATCCTAACTaGAATATGACCCACTATGGC +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIVFHPN*NMTHYG
Trigger: GCCATAGTGGGTCATATTTCAGTTAGGATGAAAGAC...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCAGCTACAGCGACGCTaGCGCCGCCACCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWQLQRR*RRHLPC
Trigger: ACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATAGCCAACTCCATCTGTaGAAAATCAGCAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYSQLHL*KISSKS
Trigger: CGACTTGCTGCTGATTTTGCACAGATGGAGTTGGCT...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTTCCAGACCAGATGGGTaGCCCCAGAGCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALSRPDG*PQSTWL
Trigger: AAGCCAGGTGCTCTGGGGGCACCCATCTGGTCTGGA...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCCAATGCAGGACTACTaGCTACATGTTCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLPMQDY*LHVHLP
Trigger: AGGCAAGTGAACATGTAGCCAGTAGTCCTGCATTGG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTATCCAAGTGGCTGCTaGGTTGTTCTTGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYYPSGC*VVLVSS
Trigger: GGAGGAAACAAGAACAACCCAGCAGCCACTTGGATA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTAGAAACAGATGGCTGTaGTGTAATGCAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLRNRWL*CNASSE
Trigger: CTCAGAGCTTGCATTACACCACAGCCATCTGTTTCT...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACCTAACAAAGGATCACTaGGTGCAGTGGGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNLTKDH*VQWAQT
Trigger: GGTCTGGGCCCACTGCACCCAGTGATCCTTTGTTAG...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTAGGGGTTCACGCCCTTaGCTGCACCCTGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALRGSRP*LHPGPS
Trigger: AGAAGGTCCAGGGTGCAGCCAAGGGCGTGAACCCCT...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGGAAGAGCAGAGGTCTaGATGATCTCAGCATCCGAT +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQGRAEV*MISASD
Trigger: ATCGGATGCTGAGATCATTCAGACCTCTGCTCTTCC...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCTGCACATCAGGGATATaGAGGTTTGGAATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFICTSGI*RFGMKE
Trigger: TTCTTTCATTCCAAACCTTCATATCCCTGATGTGCA...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGCAGCTACAGCGACGCTaGCGCCGCCACCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMQLQRR*RRHLPC
Trigger: ACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTG...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGTTCCCGGACTGTAGCTaGAGCCGCTCCAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMFPDCS*SRSRAS
Trigger: CGAGGCTCTGGAGCGGCTGCAGCTACAGTCCGGGAA...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCGAAGTGAGTAAGGGTTaGACAGCATTTTCCATAAGA +
Preference number: 4 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIEVSKG*TAFSIR
Trigger: TCTTATGGAAAATGCTGTGCAACCCTTACTCACTTC...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGTACATGGGGGTGTGTaGACGTGTGGGCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALVHGGV*TCGQEH
Trigger: GTGCTCTTGCCCACACGTGCACACACCCCCATGTAC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTGTTCCGACTTGAGTTaGATTCTGAGTCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYCSDLS*ILSLQT
Trigger: GGTTTGGAGACTCAGAATCCAACTCAAGTCGGAACA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGGCAGGTGGCTGGTGTTaGTGTCCCAGCCTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWAGGWC*CPSLRA
Trigger: GGCTCTTAGGCTGGGACACCAACACCAGCCACCTGC...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCCATGGGGCAGGTGGCTaGTGTTGGTGTCCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECHGAGG*CWCPSL
Trigger: TAGGCTGGGACACCAACACCAGCCACCTGCCCCATG...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGGGCTCCAGGCCCACCTaGCGAACTGACTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWGSRPT*RTDSQP
Trigger: GGGCTGAGAGTCAGTTCGCCAGGTGGGCCTGGAGCC...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGTGGGCACCGGAACGTaGCCGCAGCGCTTATCTGTG +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMVGTGT*PQRLSV
Trigger: CACAGATAAGCGCTGCGGCCACGTTCCGGTGCCCAC...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACAACATTTCCAACTGCTaGTTGCTCCAGCACCCGTGC +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNNISNC*LLQHPC
Trigger: GCACGGGTGCTGGAGCAACCAGCAGTTGGAAATGTT...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGAAAAATGGGAATGTTTaGTGGCTGAGAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLKNGNV*WLRGLW
Trigger: CCAGAGACCTCTCAGCCACCAAACATTCCCATTTTT...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGGGGCACTAGAGGCATaGGTCTGGACAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSGALEA*VWTSSP
Trigger: AGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAAGTTCTCTGTCCAACTaGCTGATTCCTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQSSLSN*LIPWAS
Trigger: ACTTGCCCAAGGAATCAGTCAGTTGGACAGAGAACT...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTTCCCCCTCTCACAGCTaGCTGGGAAGGCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPSPSHS*LGRLSQ
Trigger: TTGACTCAGCCTTCCCAGTCAGCTGTGAGAGGGGGA...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCAAGTGCCTGAGTAACTaGATTCCAAAATGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTKCLSN*IPKCVE
Trigger: TTCTACACATTTTGGAATTCAGTTACTCAGGCACTT...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTTGACACAGCTAATGTaGGGTTTGTATCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYLTQLM*GLYQQQ
Trigger: CTGCTGTTGATACAAACCTCACATTAGCTGTGTCAA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGAGAGGCCCAATCACCTaGCTTGCATCTCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWRGPIT*LASPCV
Trigger: CACACAAGGAGATGCAAGTCAGGTGATTGGGCCTCT...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGTGGTCATCCAGCCACTaGGAGAAGCGTGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWWSSSH*EKRVWD
Trigger: GTCCCACACACGCTTCTCTCAGTGGCTGGATGACCA...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAGCCCACCTGGCGAACTaGCTCTCAGCCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSAHLAN*LSARAW
Trigger: CCAGGCGCGGGCTGAGAGTCAGTTCGCCAGGTGGGC...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGTGGCAGGTGCCGGGTTaGTGTCGTCAGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMWQVPG*CRQQQN
Trigger: GTTCTGCTGCTGACGACATCAACCCGGCACCTGCCA...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTTGCACATCAGGGATATaGAGGTTTGGAATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLCTSGI*RFGMKE
Trigger: TTCTTTCATTCCAAACCTTCATATCCCTGATGTGCA...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTTCAGATGTTCATAGCTaGGTAACAGATAAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLSDVHS*VTDKQG
Trigger: TCCTTGCTTATCTGTTACTCAGCTATGAACATCTGA...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATTCCCGGACTGTAGCTaGAGCCGCTCCAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLFPDCS*SRSRAS
Trigger: CGAGGCTCTGGAGCGGCTGCAGCTACAGTCCGGGAA...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTTGTGTGGAGAGAAGCTaGTCTGATTTTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLCVERS*SDFTLY
Trigger: ATACAGTGTAAAATCAGAGCAGCTTCTCTCCACACA...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATGCTGAAATTATAGTTTaGTCAGCTGCCAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYAEIIV*SAASGN
Trigger: ATTCCCACTGGCAGCTGAGCAAACTATAATTTCAGC...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCCTGGGCTGGCGTCGTaGCCTAGCCAAGGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWPGLAS*PSQGEG
Trigger: ACCTTCTCCTTGGCTAGGGCACGACGCCAGCCCAGG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAAGGGTCCGAGTGCTCTaGGCCCAGCGCACCGAGGGA +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRRVRVL*AQRTEG
Trigger: TCCCTCGGTGCGCTGGGCGCAGAGCACTCGGACCCT...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR GCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTCCCGCCACTGGAAGGTaGAGTCACATGTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVPATGR*SHMSMP
Trigger: GGGCATGGACATGTGACTGCACCTTCCAGTGGCGGG...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTTTTCAAAGGTACAAATaGATGGTCCTTAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLFQRYK*MVLRVA
Trigger: TGCAACCCTAAGGACCATGCATTTGTACCTTTGAAA...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAACCAATGCAGGACTACTaGCTACATGTTCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQPMQDY*LHVHLP
Trigger: AGGCAAGTGAACATGTAGCCAGTAGTCCTGCATTGG...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGACCACTCTGCCCTCTaGAAAGGAGATTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQDHSAL*KGDFSS
Trigger: TGAACTGAAATCTCCTTTCCAGAGGGCAGAGTGGTC...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNPVLFR*MVIQPL
Trigger: CAGTGGCTGGATGACCATCCATCTGAAAAGGACAGG...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGGCTCCAGGCCCACCTaGCGAACTGACTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKGSRPT*RTDSQP
Trigger: GGGCTGAGAGTCAGTTCGCCAGGTGGGCCTGGAGCC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCGGCTCCAGGCCCACCTaGCGAACTGACTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVGSRPT*RTDSQP
Trigger: GGGCTGAGAGTCAGTTCGCCAGGTGGGCCTGGAGCC...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATCAGGTACTCGAGCAGTaGGCGCCCAGGGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYQVLEQ*APRVRV
Trigger: CACTCGGACCCTGGGCGCCCACTGCTCGAGTACCTG...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTGAGGTGGCCCGCCACTaGAAGGTGCAGTCACATGTC +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVEVARH*KVQSHV
Trigger: GACATGTGACTGCACCTTCCAGTGGCGGGCCACCTC...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGCCATGGTATCCAAGTaGCTGCTGGGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNAMVSK*LLGCSC
Trigger: ACAAGAACAACCCAGCAGCCACTTGGATACCATGGC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAACTACTGGAGGGCCATaGTATCCAAGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSTTGGP*YPSGCW
Trigger: CCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGT...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTGTTTACAGAAGGAAATaGCGGTCAACTGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLVYRRK*RSTVAK
Trigger: TTTAGCTACAGTTGACCGCCATTTCCTTCTGTAAAC...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGCTCATGTGGGATGTaGGTACCAAGCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALGSCGM*VPSLRA
Trigger: AGCCCTCAAGCTTGGTACCCACATCCCACATGAGCC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGGCCAGTGGCTCATGTaGGATGTGGGTACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSGQWLM*DVGTKL
Trigger: AAGCTTGGTACCCACATCCCACATGAGCCACTGGCC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 72 bp GAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTaGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: EGHGIQVAAGLF*FPPQNCFALGY
Trigger: ATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
3UTR CAA 72 bp CTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTaGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTT +
Preference number: 4 (lower is better)
Translates to: LLEGHGIQVAAG*FLFPPQNCFAL
Trigger: AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGCTGACTGGGAAGGCTaGGTCAAAACTTTTATGTCT +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQADWEG*VKTFMS
Trigger: AGACATAAAAGTTTTGACTCAGCCTTCCCAGTCAGC...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGTCCCCCTCTCACAGCTaGCTGGGAAGGCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMSPSHS*LGRLSQ
Trigger: TTGACTCAGCCTTCCCAGTCAGCTGTGAGAGGGGGA...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTAGCTGCCAGTGGGAATaGGCTCTGACTGGAAACAAC +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALSCQWE*ALTGNN
Trigger: GTTGTTTCCAGTCAGAGCTCATTCCCACTGGCAGCT...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCTCGTGAACAAAAACTaGATAATGATGCTGAACGGA +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLLVNKN*IMMLNG
Trigger: TCCGTTCAGCATCATTATTCAGTTTTTGTTCACGAG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTGGCAGGTGCCGGGTTaGTGTCGTCAGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLWQVPG*CRQQQN
Trigger: GTTCTGCTGCTGACGACATCAACCCGGCACCTGCCA...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGCAACAGAGTGGGTTTaGGGAATAAGGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNATEWV*GIRMTE
Trigger: CTCTGTCATCCTTATTCCTCAAACCCACTCTGTTGC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTCCAAGCTATGTAAATaGTTCTTGTGTGCACATGTG +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYSKLCK*FLCAHV
Trigger: CACATGTGCACACAAGAATCATTTACATAGCTTGGA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGAAGAAAACAGATTTGTaGTGTACACACAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLKKTDL*CTHSRT
Trigger: TGTCCTGCTGTGTGTACATCACAAATCTGTTTTCTT...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCCAGCTACAGCGACGCTaGCGCCGCCACCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVQLQRR*RRHLPC
Trigger: ACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTG...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCAACCTAACATATTATaGTGGGAGGAACAGAATGAG +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLQPNIL*WEEQNE
Trigger: CTCATTCTGTTCCTCCCAGCATAATATGTTAGGTTG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGAGTATTTCCTGGGGTTaGCATGGTAGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWSISWG*HGRSSR
Trigger: CCTGGACGATCTACCATGCCAACCCCAGGAAATACT...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTGCAGGTGGCTGGTGTTaGTGTCCCAGCCTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIAGGWC*CPSLRA
Trigger: GGCTCTTAGGCTGGGACACCAACACCAGCCACCTGC...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCATGGGGCAGGTGGCTaGTGTTGGTGTCCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWHGAGG*CWCPSL
Trigger: TAGGCTGGGACACCAACACCAGCCACCTGCCCCATG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCACCAGACCAACAGAATTaGGATCCCCTGGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSPDQQN*DPLGEL
Trigger: CAACTCTCCCAGGGGATCCCAATTCTGTTGGTCTGG...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGATCACTGGGTGCAGTaGGCCCAGACCAACAGAATT +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSDHWVQ*AQTNRI
Trigger: AATTCTGTTGGTCTGGGCCCACTGCACCCAGTGATC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTTCCTTGCCAAGAGCCTaGGGTGCAGCAGGAGTACAG +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVSLPRA*GAAGVQ
Trigger: CTGTACTCCTGCTGCACCCCAGGCTCTTGGCAAGGA...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCACTCGTCTGCATCATCTaGAGAACACCTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSLVCII*RTPSND
Trigger: GTCGTTGGAAGGTGTTCTTCAGATGATGCAGACGAG...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCCCCCTCTCACAGCTaGCTGGGAAGGCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLSPSHS*LGRLSQ
Trigger: TTGACTCAGCCTTCCCAGTCAGCTGTGAGAGGGGGA...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATGTGCAACTTATACAATaGATTCACTACTGCCACATT +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYVQLIQ*IHYCHI
Trigger: AATGTGGCAGTAGTGAATTCATTGTATAAGTTGCAC...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCAGCTGCCAGTGGGAATaGGCTCTGACTGGAAACAAC +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECSCQWE*ALTGNN
Trigger: GTTGTTTCCAGTCAGAGCTCATTCCCACTGGCAGCT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297135.9
ENST00000639557.3
CDS-3UTR TCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGTTTTCCATAAGAGCATaGATAGCCTTTAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLFSIRA*IAFRAE
Trigger: TTCAGCTCTAAAGGCTATTCATGCTCTTATGGAAAA...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTTTTCCATAAGAGCATaGATAGCCTTTAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYFSIRA*IAFRAE
Trigger: TTCAGCTCTAAAGGCTATTCATGCTCTTATGGAAAA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGAGCAGAGGTCTGAATaGTCTCAGCATCCGATAGGA +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSEQRSE*SQHPIG
Trigger: TCCTATCGGATGCTGAGATCATTCAGACCTCTGCTC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGAAGAGCAGAGGTCTaGATGATCTCAGCATCCGAT +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALGRAEV*MISASD
Trigger: ATCGGATGCTGAGATCATTCAGACCTCTGCTCTTCC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGTGGTCATCCAGCCACTaGGAGAAGCGTGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWWSSSH*EKRVWD
Trigger: GTCCCACACACGCTTCTCTCAGTGGCTGGATGACCA...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAAACAGGTTCAGGAGATaGGATGGAAAACATAAGGCA +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQNRFRR*DGKHKA
Trigger: TGCCTTATGTTTTCCATCTCATCTCCTGAACCTGTT...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTCATGGCATGCTGAGTTaGTGCACCAGGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIHGMLS*CTRWQQ
Trigger: CTGCTGCCACCTGGTGCATCAACTCAGCATGCCATG...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCATGTGTTGCAGCTGAGTaGATCTTTGGGACTCGGGAA +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSCVAAE*IFGTRE
Trigger: TTCCCGAGTCCCAAAGATTCACTCAGCTGCAACACA...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATAAGAAATTCATCCAGTaGTGCTTCAGTATGCAAGAA +
Preference number: 4 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYKKFIQ*CFSMQE
Trigger: TTCTTGCATACTGAAGCATCACTGGATGAATTTCTT...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGTTCCCGGACTGTAGCTaGAGCCGCTCCAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKFPDCS*SRSRAS
Trigger: CGAGGCTCTGGAGCGGCTGCAGCTACAGTCCGGGAA...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATTCCCGGACTGTAGCTaGAGCCGCTCCAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRFPDCS*SRSRAS
Trigger: CGAGGCTCTGGAGCGGCTGCAGCTACAGTCCGGGAA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACTTTCAGTTCAGCGGGTaGTCTCGTGAACAAAAACTG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNFQFSG*SREQKL
Trigger: CAGTTTTTGTTCACGAGAGCACCCGCTGAACTGAAA...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCGGTGGGGGCAGACTTTaGACTTACTGCAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECGGGRL*TYCSAT
Trigger: TGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACC...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTCCCGCCACTGGAAGGTaGAGTCACATGTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFPATGR*SHMSMP
Trigger: GGGCATGGACATGTGACTGCACCTTCCAGTGGCGGG...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGCGTATGTATGTGAATaGATTCATGGGGCACTACTG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNAYVCE*IHGALL
Trigger: CAGTAGTGCCCCATGAATGCATTCACATACATACGC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGTTCACGCCCTTGGCTaGACCCTGGACCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFVHALG*TLDLLG
Trigger: CCCAAGAAGGTCCAGGGTGCAGCCAAGGGCGTGAAC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACTTGCATCTCCTTGTGTaGAGAGAAGCTGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNLHLLV*REAALI
Trigger: AATCAGAGCAGCTTCTCTCCACACAAGGAGATGCAA...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGAGGTGGCCCGCCACTaGAAGGTGCAGTCACATGTC +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKEVARH*KVQSHV
Trigger: GACATGTGACTGCACCTTCCAGTGGCGGGCCACCTC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTCACCCTGGGCATGGTTaGGGTACATGGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFHPGHG*GTWGCV
Trigger: CACACACCCCCATGTACCCCAACCATGCCCAGGGTG...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCACACCCTGGACCTTCTTaGGGAGCTATAGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSHPGPS*GAIEKS
Trigger: GGATTTCTCTATAGCTCCCCAAGAAGGTCCAGGGTG...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGCCTAACATATTATGCTaGGAGGAACAGAATGAGTAT +
Preference number: 4 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLPNILC*EEQNEY
Trigger: ATACTCATTCTGTTCCTCCCAGCATAATATGTTAGG...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCATCTCCCACAGAAGTaGGTAAGGGTTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWHLPQK*VRVAQH
Trigger: ATGCTGTGCAACCCTTACTCACTTCTGTGGGAGATG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGGAGCAGAGGTCTGAATaGTCTCAGCATCCGATAGGA +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWEQRSE*SQHPIG
Trigger: TCCTATCGGATGCTGAGATCATTCAGACCTCTGCTC...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTGGAAGAGCAGAGGTCTaGATGATCTCAGCATCCGAT +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPGRAEV*MISASD
Trigger: ATCGGATGCTGAGATCATTCAGACCTCTGCTCTTCC...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTGGTCATCCAGCCACTaGGAGAAGCGTGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYWSSSH*EKRVWD
Trigger: GTCCCACACACGCTTCTCTCAGTGGCTGGATGACCA...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAATTCTCTACTTCTCACTaGTTGAACATAAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQFSTSH*LNISFQ
Trigger: CTGGAAGCTTATGTTCAATCAGTGAGAAGTAGAGAA...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGACATGCGTATGTATGTaGATGCATTCATGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWTCVCM*MHSWGT
Trigger: AGTGCCCCATGAATGCATTCACATACATACGCATGT...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACTTAATAAGCCATGTATaGCAGTTAAAGCACCCCACC +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNLISHV*QLKHPT
Trigger: GGTGGGGTGCTTTAACTGTCATACATGGCTTATTAA...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGAAGGCAGAGGCAGGATaGGAAGAAGAAAATATGGGA +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWKAEAG*EEENMG
Trigger: TCCCATATTTTCTTCTTCTCATCCTGCCTCTGCCTT...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGCAACAGAGTGGGTTTaGGGAATAAGGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALATEWV*GIRMTE
Trigger: CTCTGTCATCCTTATTCCTCAAACCCACTCTGTTGC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGCTGATGGTTCTTACTaGCCTGTCATAGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALADGSY*PVIASS
Trigger: TGAGGAAGCTATGACAGGTCAGTAAGAACCATCAGC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTACAAAGCTGACAGGCTaGTGGTTCTTACTGACCTGT +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALTKLTG*WFLLTC
Trigger: ACAGGTCAGTAAGAACCATCAGCCTGTCAGCTTTGT...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTTCTCTACTTCCCCCTTaGAGTTGTCCTTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPSLLPP*SCPWSL
Trigger: GAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGA...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAATCTCCTTCAAATGCCTaGTTCAAAAACATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQSPSNA*FKNIEE
Trigger: CTCTTCGATGTTTTTGAAGCAGGCATTTGAAGGAGA...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTAGCCAACTCCATCTGTaGAAAATCAGCAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALSQLHL*KISSKS
Trigger: CGACTTGCTGCTGATTTTGCACAGATGGAGTTGGCT...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGGGCTACATGTTCACTTaGCTGGAAGAGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWGYMFT*LEEQRS
Trigger: AGACCTCTGCTCTTCCAGGCAAGTGAACATGTAGCC...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTGGCTACATGTTCACTTaGCTGGAAGAGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPGYMFT*LEEQRS
Trigger: AGACCTCTGCTCTTCCAGGCAAGTGAACATGTAGCC...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCTGTGTGGGACCACTCTaGCCTCTGGAAAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECCVGPL*PLERRF
Trigger: AAATCTCCTTTCCAGAGGGCAGAGTGGTCCCACACA...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACTTCCATGTTGGCAGGTaGCGGGTTGATGTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNFHVGR*RVDVVS
Trigger: GCTGACGACATCAACCCGGCACCTGCCAACATGGAA...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGCAGTCACATGTCCATaGCCCCAGGCACTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFAVTCP*PQALLL
Trigger: AAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGTACATGGGGGTGTGTaGACGTGTGGGCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFVHGGV*TCGQEH
Trigger: GTGCTCTTGCCCACACGTGCACACACCCCCATGTAC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACCAAAGGATCACTGGGTaGAGTGGGCCCAGACCAACA +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNQRITG*SGPRPT
Trigger: TGTTGGTCTGGGCCCACTGCACCCAGTGATCCTTTG...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAGCTGCAGTATTTCCTaGGGTTGGCATGGTAGATCG +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWSCSIS*GWHGRS
Trigger: CGATCTACCATGCCAACCCCAGGAAATACTGCAGCT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCACCAATGCAGGACTACTaGCTACATGTTCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSPMQDY*LHVHLP
Trigger: AGGCAAGTGAACATGTAGCCAGTAGTCCTGCATTGG...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPPVLFR*MVIQPL
Trigger: CAGTGGCTGGATGACCATCCATCTGAAAAGGACAGG...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTTGCCCCCAGAGCACCTaGCTTTACCTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFCPQST*LYLMRR
Trigger: CCTCCTCATCAGGTAAAGCCAGGTGCTCTGGGGGCA...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGGGGTTGAGATTTCTGTaGGTGGTGACATATGATAGC +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWGLRFL*VVTYDS
Trigger: GCTATCATATGTCACCACCCACAGAAATCTCAACCC...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAATCCTTGCCAAGAGCCTaGGGTGCAGCAGGAGTACAG +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKSLPRA*GAAGVQ
Trigger: CTGTACTCCTGCTGCACCCCAGGCTCTTGGCAAGGA...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCCTCTGTCCAACTGACTaGTTCCTTGGGCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECLCPTD*FLGQVL
Trigger: CAAAACTTGCCCAAGGAATCAGTCAGTTGGACAGAG...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAGTTCTCTGTCCAACTaGCTGATTCCTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWSSLSN*LIPWAS
Trigger: ACTTGCCCAAGGAATCAGTCAGTTGGACAGAGAACT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGATAATCAAGTTCATTaGGACTCTGAGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNDNQVH*DSEQLL
Trigger: CAAAAGCTGCTCAGAGTCTCAATGAACTTGATTATC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTAGTAGGCGCTTAGCTTaGTTTTCCACTTCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPSRRLA*FSTSSR
Trigger: CCGACTTGAAGTGGAAAATCAAGCTAAGCGCCTACT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGCTGACTGGGAAGGCTaGGTCAAAACTTTTATGTCT +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALADWEG*VKTFMS
Trigger: AGACATAAAAGTTTTGACTCAGCCTTCCCAGTCAGC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGAGAGGCCCAATCACCTaGCTTGCATCTCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLRGPIT*LASPCV
Trigger: CACACAAGGAGATGCAAGTCAGGTGATTGGGCCTCT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAAGAGGCCCAATCACCTaGCTTGCATCTCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLRGPIT*LASPCV
Trigger: CACACAAGGAGATGCAAGTCAGGTGATTGGGCCTCT...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTCATCTCCCACAGAAGTaGGTAAGGGTTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVHLPQK*VRVAQH
Trigger: ATGCTGTGCAACCCTTACTCACTTCTGTGGGAGATG...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGACATGGCATGCTGAGTTaGTGCACCAGGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRHGMLS*CTRWQQ
Trigger: CTGCTGCCACCTGGTGCATCAACTCAGCATGCCATG...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCGTTACCATGGCATGCTaGGTTGATGCACCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVVTMAC*VDAPGG
Trigger: GCCACCTGGTGCATCAACTCAGCATGCCATGGTAAC...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGGTACACATGATGAAATaGAGCAGAAGCTGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWVHMMK*SRSWES
Trigger: CGACTCCCAGCTTCTGCTTCATTTCATCATGTGTAC...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTGTACACATGATGAAATaGAGCAGAAGCTGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPVHMMK*SRSWES
Trigger: CGACTCCCAGCTTCTGCTTCATTTCATCATGTGTAC...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTGGCAGGTGCCGGGTTaGTGTCGTCAGCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSWQVPG*CRQQQN
Trigger: GTTCTGCTGCTGACGACATCAACCCGGCACCTGCCA...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGTTAATAAGCCATGTATaGCAGTTAAAGCACCCCACC +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWLISHV*QLKHPT
Trigger: GGTGGGGTGCTTTAACTGTCATACATGGCTTATTAA...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACTCCAAGCTATGTAAATaGTTCTTGTGTGCACATGTG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNSKLCK*FLCAHV
Trigger: CACATGTGCACACAAGAATCATTTACATAGCTTGGA...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCTGGGGATGAACAGTaGAGAGAATTAGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMAGDEQ*RELGRV
Trigger: GACTCTCCCTAATTCTCTTCACTGTTCATCCCCAGC...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR GCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACTCTCCTTCAAATGCCTaGTTCAAAAACATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNSPSNA*FKNIEE
Trigger: CTCTTCGATGTTTTTGAAGCAGGCATTTGAAGGAGA...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCAGCCAACTCCATCTGTaGAAAATCAGCAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECSQLHL*KISSKS
Trigger: CGACTTGCTGCTGATTTTGCACAGATGGAGTTGGCT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAGCCAACTCCATCTGTaGAAAATCAGCAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWSQLHL*KISSKS
Trigger: CGACTTGCTGCTGATTTTGCACAGATGGAGTTGGCT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCAATCACATCCCCCAATaGAGGACTACTGGCTACATG +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECNHIPQ*RTTGYM
Trigger: CATGTAGCCAGTAGTCCTGCATTGGGGGATGTGATT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAATTGCACTTACTGCAGTaGAACACTTGCACTTTAATT +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQLHLLQ*NTCTLI
Trigger: AATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAA...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGGGTGGGGGCAGACTTTaGACTTACTGCAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWGGGRL*TYCSAT
Trigger: TGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACC...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGAGCCTAAGAGCCACCTaGTGCAGTTACCATGGCATG +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWSLRAT*CSYHGM
Trigger: CATGCCATGGTAACTGCAGCAGGTGGCTCTTAGGCT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGCCAACATTTCCAACTaGTGGTTGCTCCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKANISN*WLLQHP
Trigger: CGGGTGCTGGAGCAACCAGCAGTTGGAAATGTTGGC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGCCAACATTTCCAACTaGTGGTTGCTCCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFANISN*WLLQHP
Trigger: CGGGTGCTGGAGCAACCAGCAGTTGGAAATGTTGGC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGCCAAGAGCCTGGGGTaGAGCAGGAGTACAGTACTT +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFAKSLG*SRSTVL
Trigger: AAGTACTGTACTCCTGCTGCACCCCAGGCTCTTGGC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTAGCTGCAGTATTTCCTaGGGTTGGCATGGTAGATCG +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVSCSIS*GWHGRS
Trigger: CGATCTACCATGCCAACCCCAGGAAATACTGCAGCT...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCGACCACTCTGCCCTCTaGAAAGGAGATTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECDHSAL*KGDFSS
Trigger: TGAACTGAAATCTCCTTTCCAGAGGGCAGAGTGGTC...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCCTTGGGATGTGCCAGTaGTTCCTCAACTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECLGMCQ*FLNFVV
Trigger: GACAACAAAGTTGAGGAACCACTGGCACATCCCAAG...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAGCAGGTGGCTGGTGTTaGTGTCCCAGCCTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSAGGWC*CPSLRA
Trigger: GGCTCTTAGGCTGGGACACCAACACCAGCCACCTGC...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTCATGGGGCAGGTGGCTaGTGTTGGTGTCCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSHGAGG*CWCPSL
Trigger: TAGGCTGGGACACCAACACCAGCCACCTGCCCCATG...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCTAGTAACCACCACATaGCTCAGCATCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWLVTTT*LSICAK
Trigger: TTTGGCACAGATGCTGAGCCATGTGGTGGTTACTAG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGATCACTGGGTGCAGTaGGCCCAGACCAACAGAATT +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNDHWVQ*AQTNRI
Trigger: AATTCTGTTGGTCTGGGCCCACTGCACCCAGTGATC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTCACCCTGGACCTTCTTaGGGAGCTATAGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVHPGPS*GAIEKS
Trigger: GGATTTCTCTATAGCTCCCCAAGAAGGTCCAGGGTG...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGGCTCATGTGGGATGTaGGTACCAAGCTTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFGSCGM*VPSLRA
Trigger: AGCCCTCAAGCTTGGTACCCACATCCCACATGAGCC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTCTCTGTCCAACTGACTaGTTCCTTGGGCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVLCPTD*FLGQVL
Trigger: CAAAACTTGCCCAAGGAATCAGTCAGTTGGACAGAG...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTACTCGTCTGCATCATCTaGAGAACACCTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLLVCII*RTPSND
Trigger: GTCGTTGGAAGGTGTTCTTCAGATGATGCAGACGAG...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGAGTAGGCGCTTAGCTTaGTTTTCCACTTCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMSRRLA*FSTSSR
Trigger: CCGACTTGAAGTGGAAAATCAAGCTAAGCGCCTACT...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTGCTGACTGGGAAGGCTaGGTCAAAACTTTTATGTCT +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPADWEG*VKTFMS
Trigger: AGACATAAAAGTTTTGACTCAGCCTTCCCAGTCAGC...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACAAGTGCCTGAGTAACTaGATTCCAAAATGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNKCLSN*IPKCVE
Trigger: TTCTACACATTTTGGAATTCAGTTACTCAGGCACTT...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTACATCTCCCACAGAAGTaGGTAAGGGTTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLHLPQK*VRVAQH
Trigger: ATGCTGTGCAACCCTTACTCACTTCTGTGGGAGATG...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTATTTCCACAGGGCTCACAACAACATTAAACCAGGATGCTTATGTTCTTAAGTGGTCATCCAGCCACTaGGAGAAGCGTGTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: FISTGLTTTLNQDAYVLKWSSSH*EKRVWD
Trigger: GTCCCACACACGCTTCTCTCAGTGGCTGGATGACCA...CTTAAGAACATAAGCATCCTGGTTTAATGTTGTTGTGAGCCCTGTGGAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297135.9
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTCATGGCATGCTGAGTTaGTGCACCAGGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSHGMLS*CTRWQQ
Trigger: CTGCTGCCACCTGGTGCATCAACTCAGCATGCCATG...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCATTAGGGAGAGTCGATaGAGAAGGAAGTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECIRESR*RRKSEP
Trigger: TGGTTCAGACTTCCTTCTTCATCGACTCTCCCTAAT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR GCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTCTACTTCCCCCTTaGAGTTGTCCTTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLSLLPP*SCPWSL
Trigger: GAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGA...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATCTCTACTTCCCCCTTaGAGTTGTCCTTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLSLLPP*SCPWSL
Trigger: GAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGA...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAACATCGAAGAGTTTGTTaGCATATGAAATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQHRRVC*HMKLRR
Trigger: TCTTCTCAATTTCATATGGCAACAAACTCTTCGATG...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGCTGAAATTATAGTTTaGTCAGCTGCCAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSAEIIV*SAASGN
Trigger: ATTCCCACTGGCAGCTGAGCAAACTATAATTTCAGC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAGGCTACATGTTCACTTaGCTGGAAGAGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLGYMFT*LEEQRS
Trigger: AGACCTCTGCTCTTCCAGGCAAGTGAACATGTAGCC...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTAATCACATCCCCCAATaGAGGACTACTGGCTACATG +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVNHIPQ*RTTGYM
Trigger: CATGTAGCCAGTAGTCCTGCATTGGGGGATGTGATT...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTTTTCAGTTCAGCGGGTaGTCTCGTGAACAAAAACTG +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPFQFSG*SREQKL
Trigger: CAGTTTTTGTTCACGAGAGCACCCGCTGAACTGAAA...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTGTGTGGGACCACTCTaGCCTCTGGAAAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLCVGPL*PLERRF
Trigger: AAATCTCCTTTCCAGAGGGCAGAGTGGTCCCACACA...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGTGTGGGACCACTCTaGCCTCTGGAAAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLCVGPL*PLERRF
Trigger: AAATCTCCTTTCCAGAGGGCAGAGTGGTCCCACACA...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATTCCATGTTGGCAGGTaGCGGGTTGATGTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRFHVGR*RVDVVS
Trigger: GCTGACGACATCAACCCGGCACCTGCCAACATGGAA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCCCTTGCAGTTGTCCTTaGAGTCTCTTACTGAGATTC +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECPCSCP*SLLLRF
Trigger: GAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGG...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGTGTTCCGACTTGAGTTaGATTCTGAGTCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWCSDLS*ILSLQT
Trigger: GGTTTGGAGACTCAGAATCCAACTCAAGTCGGAACA...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGAGCTGCAGTATTTCCTaGGGTTGGCATGGTAGATCG +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWSCSIS*GWHGRS
Trigger: CGATCTACCATGCCAACCCCAGGAAATACTGCAGCT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAAGCTGCAGTATTTCCTaGGGTTGGCATGGTAGATCG +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLSCSIS*GWHGRS
Trigger: CGATCTACCATGCCAACCCCAGGAAATACTGCAGCT...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAGTTCAACAGCTCTTTaGGCAATAGCCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWSSTAL*AIASVL
Trigger: CAACACTGAGGCTATTGCCCAAAGAGCTGTTGAACT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGCTTATGAGACTGGCATaGCGGATAAAAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWLMRLA*RIKSST
Trigger: TGTTGAACTTTTTATCCGCCATGCCAGTCTCATAAG...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLPVLFR*MVIQPL
Trigger: CAGTGGCTGGATGACCATCCATCTGAAAAGGACAGG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWPVLFR*MVIQPL
Trigger: CAGTGGCTGGATGACCATCCATCTGAAAAGGACAGG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCCGTTATTATTTCCAATaGAGACCTAGCCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECRYYFQ*RPSPGQ
Trigger: TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACG...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCGTTATTATTTCCAATaGAGACCTAGCCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWRYYFQ*RPSPGQ
Trigger: TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTCTGCTGCAGTTACCATaGCATGCTGAGTTGATGCAC +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSILLQLP*HAELMH
Trigger: GTGCATCAACTCAGCATGCCATGGTAACTGCAGCAG...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCTGCTGCAGTTACCATaGCATGCTGAGTTGATGCAC +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLLLQLP*HAELMH
Trigger: GTGCATCAACTCAGCATGCCATGGTAACTGCAGCAG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGCCATGGTATCCAAGTaGCTGCTGGGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNAMVSK*LLGCSC
Trigger: ACAAGAACAACCCAGCAGCCACTTGGATACCATGGC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTTTCATGGGGCACTACTaGAGGGCCATGGTATCCAAG +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFFMGHY*RAMVSK
Trigger: CTTGGATACCATGGCCCTCCAGTAGTGCCCCATGAA...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGGGGCACTAGAGGCATaGGTCTGGACAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIGALEA*VWTSSP
Trigger: AGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAACCAGACCAACAGAATTaGGATCCCCTGGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKPDQQN*DPLGEL
Trigger: CAACTCTCCCAGGGGATCCCAATTCTGTTGGTCTGG...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTACTTGATTGGCACTCCTaGGGTAATAAAAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLLDWHS*GNKSPQ
Trigger: CTGCGGGCTTTTATTACCCCAGGAGTGCCAATCAAG...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR TCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTCTCTGTCCAACTGACTaGTTCCTTGGGCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSILCPTD*FLGQVL
Trigger: CAAAACTTGCCCAAGGAATCAGTCAGTTGGACAGAG...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTAGTTCTCTGTCCAACTaGCTGATTCCTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSISSLSN*LIPWAS
Trigger: ACTTGCCCAAGGAATCAGTCAGTTGGACAGAGAACT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATCTCGTCTGCATCATCTaGAGAACACCTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYLVCII*RTPSND
Trigger: GTCGTTGGAAGGTGTTCTTCAGATGATGCAGACGAG...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAACTCGTCTGCATCATCTaGAGAACACCTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKLVCII*RTPSND
Trigger: GTCGTTGGAAGGTGTTCTTCAGATGATGCAGACGAG...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCCTCGTCTGCATCATCTaGAGAACACCTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVLVCII*RTPSND
Trigger: GTCGTTGGAAGGTGTTCTTCAGATGATGCAGACGAG...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAAGAGGCCCAATCACCTaGCTTGCATCTCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRRGPIT*LASPCV
Trigger: CACACAAGGAGATGCAAGTCAGGTGATTGGGCCTCT...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGAGAGGCCCAATCACCTaGCTTGCATCTCCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKRGPIT*LASPCV
Trigger: CACACAAGGAGATGCAAGTCAGGTGATTGGGCCTCT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGAGCTGCCAGTGGGAATaGGCTCTGACTGGAAACAAC +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKSCQWE*ALTGNN
Trigger: GTTGTTTCCAGTCAGAGCTCATTCCCACTGGCAGCT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297135.9
ENST00000639557.3
CDS-3UTR TCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATCATCTCCCACAGAAGTaGGTAAGGGTTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYHLPQK*VRVAQH
Trigger: ATGCTGTGCAACCCTTACTCACTTCTGTGGGAGATG...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATGAGCAGAGGTCTGAATaGTCTCAGCATCCGATAGGA +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYEQRSE*SQHPIG
Trigger: TCCTATCGGATGCTGAGATCATTCAGACCTCTGCTC...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGAGCAGAGGTCTGAATaGTCTCAGCATCCGATAGGA +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKEQRSE*SQHPIG
Trigger: TCCTATCGGATGCTGAGATCATTCAGACCTCTGCTC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAACAGGTTCAGGAGATaGGATGGAAAACATAAGGCA +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWNRFRR*DGKHKA
Trigger: TGCCTTATGTTTTCCATCTCATCTCCTGAACCTGTT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTGTTACCATGGCATGCTaGGTTGATGCACCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSVTMAC*VDAPGG
Trigger: GCCACCTGGTGCATCAACTCAGCATGCCATGGTAAC...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAGTTACCATGGCATGCTaGGTTGATGCACCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSVTMAC*VDAPGG
Trigger: GCCACCTGGTGCATCAACTCAGCATGCCATGGTAAC...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGGGAGTATAAGAGAATaGGAAGGTTTGAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSGSIRE*EGLREK
Trigger: CTTTTCTCTCAAACCTTCTCATTCTCTTATACTCCC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTACTCAACTCATCACCTaGCACAGGCTAACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVTQLIT*HRLTKD
Trigger: ATCCTTTGTTAGCCTGTGTCAGGTGATGAGTTGAGT...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTTTTTTGCTAAGGGCATaGAGGTTCTGGAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVFLLRA*RFWNQP
Trigger: TGGCTGATTCCAGAACCTTCATGCCCTTAGCAAAAA...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTCTCTACTTCCCCCTTaGAGTTGTCCTTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYSLLPP*SCPWSL
Trigger: GAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGA...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTTCTCCTTCAAATGCCTaGTTCAAAAACATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALSPSNA*FKNIEE
Trigger: CTCTTCGATGTTTTTGAAGCAGGCATTTGAAGGAGA...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATGGCTACATGTTCACTTaGCTGGAAGAGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYGYMFT*LEEQRS
Trigger: AGACCTCTGCTCTTCCAGGCAAGTGAACATGTAGCC...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGAATCACATCCCCCAATaGAGGACTACTGGCTACATG +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLNHIPQ*RTTGYM
Trigger: CATGTAGCCAGTAGTCCTGCATTGGGGGATGTGATT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCTGGTGCAAATTCTTTaGCTTCTCTACTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWLVQIL*LLYFSL
Trigger: CAGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGAGCCTAAGAGCCACCTaGTGCAGTTACCATGGCATG +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKSLRAT*CSYHGM
Trigger: CATGCCATGGTAACTGCAGCAGGTGGCTCTTAGGCT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTTTTCAAAGGTACAAATaGATGGTCCTTAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALFQRYK*MVLRVA
Trigger: TGCAACCCTAAGGACCATGCATTTGTACCTTTGAAA...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACTGGTATCCAAGTGGCTaGTGGGTTGTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNWYPSG*WVVLVS
Trigger: GGAAACAAGAACAACCCAGCAGCCACTTGGATACCA...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTCAACCTAACATATTATaGTGGGAGGAACAGAATGAG +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALQPNIL*WEEQNE
Trigger: CTCATTCTGTTCCTCCCAGCATAATATGTTAGGTTG...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGAAAGCCCGCAGGAAATaGTTGGGAAGAAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMKARRK*LGRKVA
Trigger: AGCAACTTTTCTTCCCAAGCATTTCCTGCGGGCTTT...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATCAGGGAGCTTCGTTTaGCCTCCACACTCACAAGAG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRSGSFV*PPHSQE
Trigger: CTCTTGTGAGTGTGGAGGGCAAACGAAGCTCCCTGA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTCCTTGCAGTTGTCCTTaGAGTCTCTTACTGAGATTC +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVPCSCP*SLLLRF
Trigger: GAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGG...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCAGTATTTCCTGGGGTTaGCATGGTAGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVSISWG*HGRSSR
Trigger: CCTGGACGATCTACCATGCCAACCCCAGGAAATACT...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAGTATTTCCTGGGGTTaGCATGGTAGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYSISWG*HGRSSR
Trigger: CCTGGACGATCTACCATGCCAACCCCAGGAAATACT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTTTGCATCTCCTTGTGTaGAGAGAAGCTGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVLHLLV*REAALI
Trigger: AATCAGAGCAGCTTCTCTCCACACAAGGAGATGCAA...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGTTGCATCTCCTTGTGTaGAGAGAAGCTGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMLHLLV*REAALI
Trigger: AATCAGAGCAGCTTCTCTCCACACAAGGAGATGCAA...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTAGTTCAACAGCTCTTTaGGCAATAGCCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVSSTAL*AIASVL
Trigger: CAACACTGAGGCTATTGCCCAAAGAGCTGTTGAACT...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCCAATGCAGGACTACTaGCTACATGTTCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWPMQDY*LHVHLP
Trigger: AGGCAAGTGAACATGTAGCCAGTAGTCCTGCATTGG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTACCAATGCAGGACTACTaGCTACATGTTCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLPMQDY*LHVHLP
Trigger: AGGCAAGTGAACATGTAGCCAGTAGTCCTGCATTGG...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGGACCACTCTGCCCTCTaGAAAGGAGATTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLDHSAL*KGDFSS
Trigger: TGAACTGAAATCTCCTTTCCAGAGGGCAGAGTGGTC...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTGACCACTCTGCCCTCTaGAAAGGAGATTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIDHSAL*KGDFSS
Trigger: TGAACTGAAATCTCCTTTCCAGAGGGCAGAGTGGTC...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVPVLFR*MVIQPL
Trigger: CAGTGGCTGGATGACCATCCATCTGAAAAGGACAGG...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCATGTGCAGCCAAATTTaGAAACCACTGAGCTACATG +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECMCSQI*KPLSYM
Trigger: CATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACAT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTCTTGGGATGTGCCAGTaGTTCCTCAACTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSILGMCQ*FLNFVV
Trigger: GACAACAAAGTTGAGGAACCACTGGCACATCCCAAG...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCTTGGGATGTGCCAGTaGTTCCTCAACTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWLGMCQ*FLNFVV
Trigger: GACAACAAAGTTGAGGAACCACTGGCACATCCCAAG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTACCTTGTATCTTAGCTTaGGATGTGCCAGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLPCILA*DVPVVP
Trigger: AGGAACCACTGGCACATCCCAAGCTAAGATACAAGG...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTCCTTGTATCTTAGCTTaGGATGTGCCAGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIPCILA*DVPVVP
Trigger: AGGAACCACTGGCACATCCCAAGCTAAGATACAAGG...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCTAGTAACCACCACATaGCTCAGCATCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLLVTTT*LSICAK
Trigger: TTTGGCACAGATGCTGAGCCATGTGGTGGTTACTAG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGTTTACAGAAGGAAATaGCGGTCAACTGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSVYRRK*RSTVAK
Trigger: TTTAGCTACAGTTGACCGCCATTTCCTTCTGTAAAC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGGCCAGTGGCTCATGTaGGATGTGGGTACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIGQWLM*DVGTKL
Trigger: AAGCTTGGTACCCACATCCCACATGAGCCACTGGCC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCCCGCAGGAAATGCTTaGGAAGAAAAGTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKPAGNA*EEKLLG
Trigger: CCCCAGCAACTTTTCTTCCCAAGCATTTCCTGCGGG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639557.3
3UTR CAA 72 bp TTAAGACGACTGAGTGTGTTGCAGCTGAGTGAATCTTaGGGACTCGGGAAAAATAATCCACACAGACATTGC +
Preference number: 4 (lower is better)
Translates to: LRRLSVLQLSES*GLGKNNPHRHC
Trigger: GCAATGTCTGTGTGGATTATTTTTCCCGAGTCCCAAAGATTCACTCAGCTGCAACACACTCAGTCGTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATCTCTGTCCAACTGACTaGTTCCTTGGGCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYLCPTD*FLGQVL
Trigger: CAAAACTTGCCCAAGGAATCAGTCAGTTGGACAGAG...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCGATAATCAAGTTCATTaGGACTCTGAGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECDNQVH*DSEQLL
Trigger: CAAAAGCTGCTCAGAGTCTCAATGAACTTGATTATC...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAGTAGGCGCTTAGCTTaGTTTTCCACTTCAAGTCGG +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYSRRLA*FSTSSR
Trigger: CCGACTTGAAGTGGAAAATCAAGCTAAGCGCCTACT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAGCTGACTGGGAAGGCTaGGTCAAAACTTTTATGTCT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLADWEG*VKTFMS
Trigger: AGACATAAAAGTTTTGACTCAGCCTTCCCAGTCAGC...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGGAGCAGAGGTCTGAATaGTCTCAGCATCCGATAGGA +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKEQRSE*SQHPIG
Trigger: TCCTATCGGATGCTGAGATCATTCAGACCTCTGCTC...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGGAAGAGCAGAGGTCTaGATGATCTCAGCATCCGAT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRGRAEV*MISASD
Trigger: ATCGGATGCTGAGATCATTCAGACCTCTGCTCTTCC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGTTCTCTACTTCTCACTaGTTGAACATAAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWFSTSH*LNISFQ
Trigger: CTGGAAGCTTATGTTCAATCAGTGAGAAGTAGAGAA...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACATCCTAACTGAAATATaGCCCACTATGGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNILTEI*PTMAGV
Trigger: AACCCCTGCCATAGTGGGTCATATTTCAGTTAGGAT...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGCTGATGGTTCTTACTaGCCTGTCATAGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKADGSY*PVIASS
Trigger: TGAGGAAGCTATGACAGGTCAGTAAGAACCATCAGC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACTTCTGGAAACAAAGCTaGCAGGCTGATGGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNFWKQS*QADGSY
Trigger: GTAAGAACCATCAGCCTGTCAGCTTTGTTTCCAGAA...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAGTATTCTCCTTCAAATaGCTGCTTCAAAAACATCGA +
Preference number: 4 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSVFSFK*LLQKHR
Trigger: TCGATGTTTTTGAAGCAGGCATTTGAAGGAGAATAC...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGTCTGTAGTTCCACTTaGATTAAAATTCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALVCSST*IKIPLD
Trigger: ATCCAAGGGAATTTTAATGCAAGTGGAACTACAGAC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCGAAGTGAGTAAGGGTTaGACAGCATTTTCCATAAGA +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECEVSKG*TAFSIR
Trigger: TCTTATGGAAAATGCTGTGCAACCCTTACTCACTTC...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCAGCCAACTCCATCTGTaGAAAATCAGCAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVSQLHL*KISSKS
Trigger: CGACTTGCTGCTGATTTTGCACAGATGGAGTTGGCT...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCAATCACATCCCCCAATaGAGGACTACTGGCTACATG +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVNHIPQ*RTTGYM
Trigger: CATGTAGCCAGTAGTCCTGCATTGGGGGATGTGATT...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTAATCACATCCCCCAATaGAGGACTACTGGCTACATG +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFNHIPQ*RTTGYM
Trigger: CATGTAGCCAGTAGTCCTGCATTGGGGGATGTGATT...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTCTGCAGTGCAACACTTaGACTTTAATTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPLQCNT*TLIFLQ
Trigger: TTGGAGGAAAATTAAAGTGCAAGTGTTGCACTGCAG...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAATGGTATCCAAGTGGCTaGTGGGTTGTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKWYPSG*WVVLVS
Trigger: GGAAACAAGAACAACCCAGCAGCCACTTGGATACCA...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCCTTGCAGTTGTCCTTaGAGTCTCTTACTGAGATTC +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWPCSCP*SLLLRF
Trigger: GAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGTGTTCCGACTTGAGTTaGATTCTGAGTCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWCSDLS*ILSLQT
Trigger: GGTTTGGAGACTCAGAATCCAACTCAAGTCGGAACA...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGAGTATTTCCTGGGGTTaGCATGGTAGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKSISWG*HGRSSR
Trigger: CCTGGACGATCTACCATGCCAACCCCAGGAAATACT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAAGTTCAACAGCTCTTTaGGCAATAGCCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLSSTAL*AIASVL
Trigger: CAACACTGAGGCTATTGCCCAAAGAGCTGTTGAACT...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTCTTATGAGACTGGCATaGCGGATAAAAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPLMRLA*RIKSST
Trigger: TGTTGAACTTTTTATCCGCCATGCCAGTCTCATAAG...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCTTATGAGACTGGCATaGCGGATAAAAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWLMRLA*RIKSST
Trigger: TGTTGAACTTTTTATCCGCCATGCCAGTCTCATAAG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGGCAGCTGAACCATTATaGGATAAACTGGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWAAEPL*DKLVQI
Trigger: AATTTGCACCAGTTTATCCCATAATGGTTCAGCTGC...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCGGACTTGGTTATGGATaGGAAAGACATTTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECGLGYG*ERHFSL
Trigger: AAGGCTAAAATGTCTTTCCCATCCATAACCAAGTCC...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGACCCATAGGAGGACTTaGTTATGGATGGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWTHRRT*LWMGKT
Trigger: TGTCTTTCCCATCCATAACCAAGTCCTCCTATGGGT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGATGTGCAGCCAAATTTaGAAACCACTGAGCTACATG +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMMCSQI*KPLSYM
Trigger: CATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACAT...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCGTTATTATTTCCAATaGAGACCTAGCCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLRYYFQ*RPSPGQ
Trigger: TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTTATCCAAGTGGCTGCTaGGTTGTTCTTGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFYPSGC*VVLVSS
Trigger: GGAGGAAACAAGAACAACCCAGCAGCCACTTGGATA...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATGTTCCACGCCTTGATTaGCACTCCTGGGGTAATAAA +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYVPRLD*HSWGNK
Trigger: TTTATTACCCCAGGAGTGCCAATCAAGGCGTGGAAC...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR TCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGAGTTCTCTGTCCAACTaGCTGATTCCTTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKSSLSN*LIPWAS
Trigger: ACTTGCCCAAGGAATCAGTCAGTTGGACAGAGAACT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAAGTGCCTGAGTAACTaGATTCCAAAATGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWKCLSN*IPKCVE
Trigger: TTCTACACATTTTGGAATTCAGTTACTCAGGCACTT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTTTGACACAGCTAATGTaGGGTTTGTATCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSILTQLM*GLYQQQ
Trigger: CTGCTGTTGATACAAACCTCACATTAGCTGTGTCAA...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTCATCTCCCACAGAAGTaGGTAAGGGTTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSHLPQK*VRVAQH
Trigger: ATGCTGTGCAACCCTTACTCACTTCTGTGGGAGATG...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTCATCTCCCACAGAAGTaGGTAAGGGTTGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIHLPQK*VRVAQH
Trigger: ATGCTGTGCAACCCTTACTCACTTCTGTGGGAGATG...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTGGAAGAGCAGAGGTCTaGATGATCTCAGCATCCGAT +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSGRAEV*MISASD
Trigger: ATCGGATGCTGAGATCATTCAGACCTCTGCTCTTCC...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCATTTCATGTCATTACTaGAGAGCAGACATAGCCTTT +
Preference number: 4 (lower is better)
Translates to: IVVSVRLPLLDMLINVECISCHY*RADIAF
Trigger: AAAGGCTATGTCTGCTCTTCAGTAATGACATGAAAT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGAACAGGTTCAGGAGATaGGATGGAAAACATAAGGCA +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLNRFRR*DGKHKA
Trigger: TGCCTTATGTTTTCCATCTCATCTCCTGAACCTGTT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGTACACATGATGAAATaGAGCAGAAGCTGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRVHMMK*SRSWES
Trigger: CGACTCCCAGCTTCTGCTTCATTTCATCATGTGTAC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAATAGGCTTGAAAATTaGTATCCTGTGGTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWNRLEN*YPVVLK
Trigger: CTTTAGCACCACAGGATATCAATTTTCAAGCCTATT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTGGGAGTATAAGAGAATaGGAAGGTTTGAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVGSIRE*EGLREK
Trigger: CTTTTCTCTCAAACCTTCTCATTCTCTTATACTCCC...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAACTCAACTCATCACCTaGCACAGGCTAACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKTQLIT*HRLTKD
Trigger: ATCCTTTGTTAGCCTGTGTCAGGTGATGAGTTGAGT...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGTCTCCTTCAAATGCCTaGTTCAAAAACATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMSPSNA*FKNIEE
Trigger: CTCTTCGATGTTTTTGAAGCAGGCATTTGAAGGAGA...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAAGTGAGTAAGGGTTaGACAGCATTTTCCATAAGA +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMEVSKG*TAFSIR
Trigger: TCTTATGGAAAATGCTGTGCAACCCTTACTCACTTC...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAAGCCAACTCCATCTGTaGAAAATCAGCAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRSQLHL*KISSKS
Trigger: CGACTTGCTGCTGATTTTGCACAGATGGAGTTGGCT...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGGCTACATGTTCACTTaGCTGGAAGAGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIGYMFT*LEEQRS
Trigger: AGACCTCTGCTCTTCCAGGCAAGTGAACATGTAGCC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTTCAGTTCAGCGGGTaGTCTCGTGAACAAAAACTG +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYFQFSG*SREQKL
Trigger: CAGTTTTTGTTCACGAGAGCACCCGCTGAACTGAAA...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTTGTGTGGGACCACTCTaGCCTCTGGAAAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPICVGPL*PLERRF
Trigger: AAATCTCCTTTCCAGAGGGCAGAGTGGTCCCACACA...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCTGGTGCAAATTCTTTaGCTTCTCTACTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWLVQIL*LLYFSL
Trigger: CAGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTACATTGGCAATACAGCTaGTTTTGCTCTGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLHWQYS*FCSELQ
Trigger: TTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATG...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCATTGGCAATACAGCTaGTTTTGCTCTGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLHWQYS*FCSELQ
Trigger: TTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCATTGGCAATACAGCTaGTTTTGCTCTGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWHWQYS*FCSELQ
Trigger: TTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGTTGCACTTACTGCAGTaGAACACTTGCACTTTAATT +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWLHLLQ*NTCTLI
Trigger: AATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAA...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAAGACTTTGCACTTACTaGAGTGCAACACTTGCACTT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLRLCTY*SATLAL
Trigger: AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCT...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGGAGTCACGCGTTAGTTaGTACACAGCTTTATCTGTT +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLESRVS*YTALSV
Trigger: AACAGATAAAGCTGTGTAGCAACTAACGCGTGACTC...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CCA 90 bp TTTATTTCCACAGGGCTCACAACAACATTAAACCAGGATGCTTATGTTCTTAAGAGTATTTCCTGGGGTTaGCATGGTAGATCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FISTGLTTTLNQDAYVLKSISWG*HGRSSR
Trigger: CCTGGACGATCTACCATGCCAACCCCAGGAAATACT...CTTAAGAACATAAGCATCCTGGTTTAATGTTGTTGTGAGCCCTGTGGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297135.9
CDS-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTAGTTCAACAGCTCTTTaGGCAATAGCCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFSSTAL*AIASVL
Trigger: CAACACTGAGGCTATTGCCCAAAGAGCTGTTGAACT...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGCTTATGAGACTGGCATaGCGGATAAAAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMLMRLA*RIKSST
Trigger: TGTTGAACTTTTTATCCGCCATGCCAGTCTCATAAG...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCCAATGCAGGACTACTaGCTACATGTTCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKPMQDY*LHVHLP
Trigger: AGGCAAGTGAACATGTAGCCAGTAGTCCTGCATTGG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIPVLFR*MVIQPL
Trigger: CAGTGGCTGGATGACCATCCATCTGAAAAGGACAGG...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAACTGCCAACTATGAATaGGTTAGCACAAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLTANYE*VSTKWR
Trigger: TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGT...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGATAGTAGCAGTCTTTTaGAGTATGTGTTTAACTGCC +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWIVAVF*SMCLTA
Trigger: GGCAGTTAAACACATACTCCAAAAGACTGCTACTAT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAAAGAAGTGGGGACTTTaGGTTTATGTACCCATAGGA +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLKKWGL*VYVPIG
Trigger: TCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGAAGAAGTGGGGACTTTaGGTTTATGTACCCATAGGA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWKKWGL*VYVPIG
Trigger: TCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTATGTGCAGCCAAATTTaGAAACCACTGAGCTACATG +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIMCSQI*KPLSYM
Trigger: CATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACAT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCTTGGGATGTGCCAGTaGTTCCTCAACTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKLGMCQ*FLNFVV
Trigger: GACAACAAAGTTGAGGAACCACTGGCACATCCCAAG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGACCTTGTATCTTAGCTTaGGATGTGCCAGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRPCILA*DVPVVP
Trigger: AGGAACCACTGGCACATCCCAAGCTAAGATACAAGG...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTATGTTACTTACCAAGTaGTGTTTCTGGTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: VGADFALTAVQHLHFNFPMLLTK*CFWLGI
Trigger: GATTCCTAACCAGAAACACCACTTGGTAAGTAACAT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCACTGCTGCAGTTACCATaGCATGCTGAGTTGATGCAC +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSLLQLP*HAELMH
Trigger: GTGCATCAACTCAGCATGCCATGGTAACTGCAGCAG...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCTAGTAACCACCACATaGCTCAGCATCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKLVTTT*LSICAK
Trigger: TTTGGCACAGATGCTGAGCCATGTGGTGGTTACTAG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGTCCTTAGGGTTGCATaGGACACAGGATTGCACATC +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIVLRVA*DTGLHI
Trigger: GATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTAGAAACAGATGGCTGTaGTGTAATGCAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFRNRWL*CNASSE
Trigger: CTCAGAGCTTGCATTACACCACAGCCATCTGTTTCT...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGCTGACTGGGAAGGCTaGGTCAAAACTTTTATGTCT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRADWEG*VKTFMS
Trigger: AGACATAAAAGTTTTGACTCAGCCTTCCCAGTCAGC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCTTGACACAGCTAATGTaGGGTTTGTATCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVLTQLM*GLYQQQ
Trigger: CTGCTGTTGATACAAACCTCACATTAGCTGTGTCAA...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCTCGTGAACAAAAACTaGATAATGATGCTGAACGGA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWLVNKN*IMMLNG
Trigger: TCCGTTCAGCATCATTATTCAGTTTTTGTTCACGAG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCTCGTGAACAAAAACTaGATAATGATGCTGAACGGA +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLLVNKN*IMMLNG
Trigger: TCCGTTCAGCATCATTATTCAGTTTTTGTTCACGAG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAACAGGTTCAGGAGATaGGATGGAAAACATAAGGCA +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYNRFRR*DGKHKA
Trigger: TGCCTTATGTTTTCCATCTCATCTCCTGAACCTGTT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGAATAGGCTTGAAAATTaGTATCCTGTGGTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMNRLEN*YPVVLK
Trigger: CTTTAGCACCACAGGATATCAATTTTCAAGCCTATT...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGTCTTTCATCCTAACTaGAATATGACCCACTATGGC +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKVFHPN*NMTHYG
Trigger: GCCATAGTGGGTCATATTTCAGTTAGGATGAAAGAC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTAAGAAATTCATCCAGTaGTGCTTCAGTATGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GRVENDFKSYFRDATEWVKKFIQ*CFSMQE
Trigger: TTCTTGCATACTGAAGCATCACTGGATGAATTTCTT...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCATCGAAGAGTTTGTTaGCATATGAAATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWHRRVC*HMKLRR
Trigger: TCTTCTCAATTTCATATGGCAACAAACTCTTCGATG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGTATTCTCCTTCAAATaGCTGCTTCAAAAACATCGA +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMVFSFK*LLQKHR
Trigger: TCGATGTTTTTGAAGCAGGCATTTGAAGGAGAATAC...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGTCTGTAGTTCCACTTaGATTAAAATTCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMVCSST*IKIPLD
Trigger: ATCCAAGGGAATTTTAATGCAAGTGGAACTACAGAC...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGTGTGTGGAGAGAAGCTaGTCTGATTTTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWCVERS*SDFTLY
Trigger: ATACAGTGTAAAATCAGAGCAGCTTCTCTCCACACA...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGTGTGGAGAGAAGCTaGTCTGATTTTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLCVERS*SDFTLY
Trigger: ATACAGTGTAAAATCAGAGCAGCTTCTCTCCACACA...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATTTCAGTTCAGCGGGTaGTCTCGTGAACAAAAACTG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRFQFSG*SREQKL
Trigger: CAGTTTTTGTTCACGAGAGCACCCGCTGAACTGAAA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCCTTGCAGTTGTCCTTaGAGTCTCTTACTGAGATTC +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKPCSCP*SLLLRF
Trigger: GAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGTGTTCCGACTTGAGTTaGATTCTGAGTCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKCSDLS*ILSLQT
Trigger: GGTTTGGAGACTCAGAATCCAACTCAAGTCGGAACA...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGACCCATAGGAGGACTTaGTTATGGATGGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKTHRRT*LWMGKT
Trigger: TGTCTTTCCCATCCATAACCAAGTCCTCCTATGGGT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAAGAAGTGGGGACTTTaGGTTTATGTACCCATAGGA +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYKKWGL*VYVPIG
Trigger: TCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCATGTGCAGCCAAATTTaGAAACCACTGAGCTACATG +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVMCSQI*KPLSYM
Trigger: CATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACAT...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTCCTTGTATCTTAGCTTaGGATGTGCCAGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSPCILA*DVPVVP
Trigger: AGGAACCACTGGCACATCCCAAGCTAAGATACAAGG...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCGATAATCAAGTTCATTaGGACTCTGAGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVDNQVH*DSEQLL
Trigger: CAAAAGCTGCTCAGAGTCTCAATGAACTTGATTATC...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGATAATCAAGTTCATTaGGACTCTGAGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKDNQVH*DSEQLL
Trigger: CAAAAGCTGCTCAGAGTCTCAATGAACTTGATTATC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGAAGTGCCTGAGTAACTaGATTCCAAAATGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWKCLSN*IPKCVE
Trigger: TTCTACACATTTTGGAATTCAGTTACTCAGGCACTT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAAAGTGCCTGAGTAACTaGATTCCAAAATGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLKCLSN*IPKCVE
Trigger: TTCTACACATTTTGGAATTCAGTTACTCAGGCACTT...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGAAGTGCCTGAGTAACTaGATTCCAAAATGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLKCLSN*IPKCVE
Trigger: TTCTACACATTTTGGAATTCAGTTACTCAGGCACTT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATTGACACAGCTAATGTaGGGTTTGTATCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRLTQLM*GLYQQQ
Trigger: CTGCTGTTGATACAAACCTCACATTAGCTGTGTCAA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAGTGCAACTTATACAATaGATTCACTACTGCCACATT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLVQLIQ*IHYCHI
Trigger: AATGTGGCAGTAGTGAATTCATTGTATAAGTTGCAC...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGTGCAACTTATACAATaGATTCACTACTGCCACATT +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNVQLIQ*IHYCHI
Trigger: AATGTGGCAGTAGTGAATTCATTGTATAAGTTGCAC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGATTTCATGTCATTACTaGAGAGCAGACATAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLISCHY*RADIAF
Trigger: AAAGGCTATGTCTGCTCTTCAGTAATGACATGAAAT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTAATAGGCTTGAAAATTaGTATCCTGTGGTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSINRLEN*YPVVLK
Trigger: CTTTAGCACCACAGGATATCAATTTTCAAGCCTATT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTACATGCGTATGTATGTaGATGCATTCATGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPITCVCM*MHSWGT
Trigger: AGTGCCCCATGAATGCATTCACATACATACGCATGT...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAAAGAAAACAGATTTGTaGTGTACACACAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKKKTDL*CTHSRT
Trigger: TGTCCTGCTGTGTGTACATCACAAATCTGTTTTCTT...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGGTATTCTCCTTCAAATaGCTGCTTCAAAAACATCGA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWVFSFK*LLQKHR
Trigger: TCGATGTTTTTGAAGCAGGCATTTGAAGGAGAATAC...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAGTCTGTAGTTCCACTTaGATTAAAATTCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLVCSST*IKIPLD
Trigger: ATCCAAGGGAATTTTAATGCAAGTGGAACTACAGAC...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACGTCTGTAGTTCCACTTaGATTAAAATTCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNVCSST*IKIPLD
Trigger: ATCCAAGGGAATTTTAATGCAAGTGGAACTACAGAC...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTTGTGTGGAGAGAAGCTaGTCTGATTTTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFCVERS*SDFTLY
Trigger: ATACAGTGTAAAATCAGAGCAGCTTCTCTCCACACA...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGCTGAAATTATAGTTTaGTCAGCTGCCAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRAEIIV*SAASGN
Trigger: ATTCCCACTGGCAGCTGAGCAAACTATAATTTCAGC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297135.9
ENST00000639557.3
CDS-3UTR GCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGGCTGAAATTATAGTTTaGTCAGCTGCCAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKAEIIV*SAASGN
Trigger: ATTCCCACTGGCAGCTGAGCAAACTATAATTTCAGC...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297135.9
ENST00000639557.3
CDS-3UTR GCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGAAGTGAGTAAGGGTTaGACAGCATTTTCCATAAGA +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKEVSKG*TAFSIR
Trigger: TCTTATGGAAAATGCTGTGCAACCCTTACTCACTTC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATGAAGTGAGTAAGGGTTaGACAGCATTTTCCATAAGA +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYEVSKG*TAFSIR
Trigger: TCTTATGGAAAATGCTGTGCAACCCTTACTCACTTC...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCATTTCAGTTCAGCGGGTaGTCTCGTGAACAAAAACTG +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSFQFSG*SREQKL
Trigger: CAGTTTTTGTTCACGAGAGCACCCGCTGAACTGAAA...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCTGGTGCAAATTCTTTaGCTTCTCTACTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKLVQIL*LLYFSL
Trigger: CAGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGACTGGTGCAAATTCTTTaGCTTCTCTACTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRLVQIL*LLYFSL
Trigger: CAGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAG...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCCTGCAGTGCAACACTTaGACTTTAATTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVLQCNT*TLIFLQ
Trigger: TTGGAGGAAAATTAAAGTGCAAGTGTTGCACTGCAG...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAAGACTTTGCACTTACTaGAGTGCAACACTTGCACTT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRRLCTY*SATLAL
Trigger: AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCT...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTCCTTGCAGTTGTCCTTaGAGTCTCTTACTGAGATTC +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIPCSCP*SLLLRF
Trigger: GAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGG...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTTGTTCCGACTTGAGTTaGATTCTGAGTCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPICSDLS*ILSLQT
Trigger: GGTTTGGAGACTCAGAATCCAACTCAAGTCGGAACA...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTTATTTCCACAGGGCTCACAACAACATTAAACCAGGATGCTTATGTTCTTAAGTTGCATCTCCTTGTGTaGAGAGAAGCTGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: FISTGLTTTLNQDAYVLKLHLLV*REAALI
Trigger: AATCAGAGCAGCTTCTCTCCACACAAGGAGATGCAA...CTTAAGAACATAAGCATCCTGGTTTAATGTTGTTGTGAGCCCTGTGGAAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297135.9
CDS-3UTR CCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTTGCATCTCCTTGTGTaGAGAGAAGCTGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSLHLLV*REAALI
Trigger: AATCAGAGCAGCTTCTCTCCACACAAGGAGATGCAA...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTAGTTCAACAGCTCTTTaGGCAATAGCCTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSSSTAL*AIASVL
Trigger: CAACACTGAGGCTATTGCCCAAAGAGCTGTTGAACT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTCTTATGAGACTGGCATaGCGGATAAAAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: AKYRLSNSTADEITQETFLMRLA*RIKSST
Trigger: TGTTGAACTTTTTATCCGCCATGCCAGTCTCATAAG...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCATTATGGGATAAACTaGTGCAAATTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWHYGIN*CKFFAF
Trigger: GAAGGCAAAGAATTTGCACCAGTTTATCCCATAATG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCATTATGGGATAAACTaGTGCAAATTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLHYGIN*CKFFAF
Trigger: GAAGGCAAAGAATTTGCACCAGTTTATCCCATAATG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCGCAGCTGAACCATTATaGGATAAACTGGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVAAEPL*DKLVQI
Trigger: AATTTGCACCAGTTTATCCCATAATGGTTCAGCTGC...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGACTGCCAACTATGAATaGGTTAGCACAAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKTANYE*VSTKWR
Trigger: TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTATAGTAGCAGTCTTTTaGAGTATGTGTTTAACTGCC +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIIVAVF*SMCLTA
Trigger: GGCAGTTAAACACATACTCCAAAAGACTGCTACTAT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTACCCATAGGAGGACTTaGTTATGGATGGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSTHRRT*LWMGKT
Trigger: TGTCTTTCCCATCCATAACCAAGTCCTCCTATGGGT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTTTGACACAGCTAATGTaGGGTTTGTATCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPILTQLM*GLYQQQ
Trigger: CTGCTGTTGATACAAACCTCACATTAGCTGTGTCAA...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTTGACACAGCTAATGTaGGGTTTGTATCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSLTQLM*GLYQQQ
Trigger: CTGCTGTTGATACAAACCTCACATTAGCTGTGTCAA...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATTCTCTACTTCTCACTaGTTGAACATAAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRFSTSH*LNISFQ
Trigger: CTGGAAGCTTATGTTCAATCAGTGAGAAGTAGAGAA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCATTTCATGTCATTACTaGAGAGCAGACATAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVISCHY*RADIAF
Trigger: AAAGGCTATGTCTGCTCTTCAGTAATGACATGAAAT...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCATCGAAGAGTTTGTTaGCATATGAAATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWHRRVC*HMKLRR
Trigger: TCTTCTCAATTTCATATGGCAACAAACTCTTCGATG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATCTCCTTCAAATGCCTaGTTCAAAAACATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRSPSNA*FKNIEE
Trigger: CTCTTCGATGTTTTTGAAGCAGGCATTTGAAGGAGA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGTATTCTCCTTCAAATaGCTGCTTCAAAAACATCGA +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKVFSFK*LLQKHR
Trigger: TCGATGTTTTTGAAGCAGGCATTTGAAGGAGAATAC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGACTGCAGTGCAACACTTaGACTTTAATTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRLQCNT*TLIFLQ
Trigger: TTGGAGGAAAATTAAAGTGCAAGTGTTGCACTGCAG...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTAGACTTTGCACTTACTaGAGTGCAACACTTGCACTT +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSRLCTY*SATLAL
Trigger: AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTTTTACACTGTATAACTaGATGGTCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIFTLYN*MVFATF
Trigger: AAATGTGGCAAAGACCATCCAGTTATACAGTGTAAA...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACTTTACACTGTATAACTaGATGGTCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: GLSTGERNSSSDASVCKNFTLYN*MVFATF
Trigger: AAATGTGGCAAAGACCATCCAGTTATACAGTGTAAA...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTTTACACTGTATAACTaGATGGTCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLFTLYN*MVFATF
Trigger: AAATGTGGCAAAGACCATCCAGTTATACAGTGTAAA...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCTTATGAGACTGGCATaGCGGATAAAAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKLMRLA*RIKSST
Trigger: TGTTGAACTTTTTATCCGCCATGCCAGTCTCATAAG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCCATTATGGGATAAACTaGTGCAAATTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVHYGIN*CKFFAF
Trigger: GAAGGCAAAGAATTTGCACCAGTTTATCCCATAATG...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGGGACTTGGTTATGGATaGGAAAGACATTTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKGLGYG*ERHFSL
Trigger: AAGGCTAAAATGTCTTTCCCATCCATAACCAAGTCC...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGGACTTGGTTATGGATaGGAAAGACATTTTAGCCTT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRGLGYG*ERHFSL
Trigger: AAGGCTAAAATGTCTTTCCCATCCATAACCAAGTCC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCATGTTACTTACCAAGTaGTGTTTCTGGTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVMLLTK*CFWLGI
Trigger: GATTCCTAACCAGAAACACCACTTGGTAAGTAACAT...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAGATAATCAAGTTCATTaGGACTCTGAGCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSDNQVH*DSEQLL
Trigger: CAAAAGCTGCTCAGAGTCTCAATGAACTTGATTATC...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGTGCAACTTATACAATaGATTCACTACTGCCACATT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRVQLIQ*IHYCHI
Trigger: AATGTGGCAGTAGTGAATTCATTGTATAAGTTGCAC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGGTGCAACTTATACAATaGATTCACTACTGCCACATT +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKVQLIQ*IHYCHI
Trigger: AATGTGGCAGTAGTGAATTCATTGTATAAGTTGCAC...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR TCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATTTTCCATAAGAGCATaGATAGCCTTTAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRFSIRA*IAFRAE
Trigger: TTCAGCTCTAAAGGCTATTCATGCTCTTATGGAAAA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297135.9
ENST00000639557.3
CDS-3UTR TCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCACTCGTGAACAAAAACTaGATAATGATGCTGAACGGA +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSLVNKN*IMMLNG
Trigger: TCCGTTCAGCATCATTATTCAGTTTTTGTTCACGAG...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTTCTCTACTTCTCACTaGTTGAACATAAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSFSTSH*LNISFQ
Trigger: CTGGAAGCTTATGTTCAATCAGTGAGAAGTAGAGAA...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAACATCGAAGAGTTTGTTaGCATATGAAATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKHRRVC*HMKLRR
Trigger: TCTTCTCAATTTCATATGGCAACAAACTCTTCGATG...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGTATTCTCCTTCAAATaGCTGCTTCAAAAACATCGA +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRVFSFK*LLQKHR
Trigger: TCGATGTTTTTGAAGCAGGCATTTGAAGGAGAATAC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGGTATTCTCCTTCAAATaGCTGCTTCAAAAACATCGA +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKVFSFK*LLQKHR
Trigger: TCGATGTTTTTGAAGCAGGCATTTGAAGGAGAATAC...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGTCTGTAGTTCCACTTaGATTAAAATTCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRVCSST*IKIPLD
Trigger: ATCCAAGGGAATTTTAATGCAAGTGGAACTACAGAC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR GCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCATGTGTGGAGAGAAGCTaGTCTGATTTTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSCVERS*SDFTLY
Trigger: ATACAGTGTAAAATCAGAGCAGCTTCTCTCCACACA...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTGAAGTGAGTAAGGGTTaGACAGCATTTTCCATAAGA +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSEVSKG*TAFSIR
Trigger: TCTTATGGAAAATGCTGTGCAACCCTTACTCACTTC...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATTGCACTTACTGCAGTaGAACACTTGCACTTTAATT +
Preference number: 4 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRLHLLQ*NTCTLI
Trigger: AATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTTACACTGTATAACTaGATGGTCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: VIGMNVQPNLETTELHAYFTLYN*MVFATF
Trigger: AAATGTGGCAAAGACCATCCAGTTATACAGTGTAAA...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
3UTR CAA 72 bp AAAAAGCATGACAGTATTTCTGAGCATGATTTTCAGTaGCTAAATATAGGCTTAGCAACAGCACTGCTGATG +
Preference number: 4 (lower is better)
Translates to: KKHDSISEHDFQ*LNIGLATALLM
Trigger: CATCAGCAGTGCTGTTGCTAAGCCTATATTTAGCAACTGAAAATCATGCTCAGAAATACTGTCATGCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTGTGCAACTTATACAATaGATTCACTACTGCCACATT +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSVQLIQ*IHYCHI
Trigger: AATGTGGCAGTAGTGAATTCATTGTATAAGTTGCAC...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCATTTTCCATAAGAGCATaGATAGCCTTTAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSFSIRA*IAFRAE
Trigger: TTCAGCTCTAAAGGCTATTCATGCTCTTATGGAAAA...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297135.9
CDS-3UTR TCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTATTTCATGTCATTACTaGAGAGCAGACATAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSISCHY*RADIAF
Trigger: AAAGGCTATGTCTGCTCTTCAGTAATGACATGAAAT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR TCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGACAACTGTTTTGGATaGACTCATTCCAACTTGTTA +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIDNCFG*THSNLL
Trigger: TAACAAGTTGGAATGAGTTCATCCAAAACAGTTGTC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAGTCTGTAGTTCCACTTaGATTAAAATTCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSVCSST*IKIPLD
Trigger: ATCCAAGGGAATTTTAATGCAAGTGGAACTACAGAC...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGTTTACACTGTATAACTaGATGGTCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: MNVQPNLETTELHAYLVKFTLYN*MVFATF
Trigger: AAATGTGGCAAAGACCATCCAGTTATACAGTGTAAA...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCACATTATGGGATAAACTaGTGCAAATTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSHYGIN*CKFFAF
Trigger: GAAGGCAAAGAATTTGCACCAGTTTATCCCATAATG...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAATGTTACTTACCAAGTaGTGTTTCTGGTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSMLLTK*CFWLGI
Trigger: GATTCCTAACCAGAAACACCACTTGGTAAGTAACAT...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTCCTAACATATTATGCTaGGAGGAACAGAATGAGTAT +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIPNILC*EEQNEY
Trigger: ATACTCATTCTGTTCCTCCCAGCATAATATGTTAGG...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR GCA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTCATCGAAGAGTTTGTTaGCATATGAAATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSHRRVC*HMKLRR
Trigger: TCTTCTCAATTTCATATGGCAACAAACTCTTCGATG...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR GCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTCATCGAAGAGTTTGTTaGCATATGAAATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIHRRVC*HMKLRR
Trigger: TCTTCTCAATTTCATATGGCAACAAACTCTTCGATG...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CCA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTTTTACACTGTATAACTaGATGGTCTTTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIFTLYN*MVFATF
Trigger: AAATGTGGCAAAGACCATCCAGTTATACAGTGTAAA...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS GCA 90 bp TGTCTCTCGCAGCAGCTCAGGGCCGCGCCCCCTGGGCTGGCGTCGTaGCCTAGCCAAGGAGAAGGTGGGCACCGGAACGTGGCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: CLSQQLRAAPPGLAS*PSQGEGGHRNVAAA
Trigger: CGCTGCGGCCACGTTCCGGTGCCCACCTTCTCCTTGGCTAGGGCACGACGCCAGCCCAGGGGGCGCGGCCCTGAGCTGCTGCGAGAGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
CDS CCA 90 bp CTTTCAGCTGTCTCTCGCAGCAGCTCAGGGCCGCGCCCCCTGGGCTaGCGTCGTGCCCTAGCCAAGGAGAAGGTGGGCACCGGAACGTGG +
Preference number: 5 (lower is better)
Translates to: LSAVSRSSSGPRPLG*RRALAKEKVGTGTW
Trigger: CCACGTTCCGGTGCCCACCTTCTCCTTGGCTAGGGCACGACGCCAGCCCAGGGGGCGCGGCCCTGAGCTGCTGCGAGAGACAGCTGAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
CDS TCA 90 bp CAGCGACGCTGCCGCCGCCACCTTCCATGTTGGCAGGTGCCGGGTTaGTGTCGTCAGCAGCAGAACGGCTCCGCCCAGGTGGTGACGCAG +
Preference number: 5 (lower is better)
Translates to: QRRCRRHLPCWQVPG*CRQQQNGSAQVVTQ
Trigger: CTGCGTCACCACCTGGGCGGAGCCGTTCTGCTGCTGACGACATCAACCCGGCACCTGCCAACATGGAAGGTGGCGGCGGCAGCGTCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347053.8
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
ENST00000640820.3
CDS GCA 90 bp GCCAGCTACAGCGACGCTGCCGCCGCCACCTTCCATGTTGGCAGGTaGCGGGTTGATGTCGTCAGCAGCAGAACGGCTCCGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ASYSDAAAATFHVGR*RVDVVSSRTAPPRW
Trigger: CCACCTGGGCGGAGCCGTTCTGCTGCTGACGACATCAACCCGGCACCTGCCAACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347053.8
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
ENST00000640820.3
CDS GCA 90 bp AAAGTCACTATAACACCCGTCCTGCAGAAGTTCCCGGACTGTAGCTaGAGCCGCTCCAGAGCCTCGAGCTCCGAGGCCAGCTACAGCGAC +
Preference number: 5 (lower is better)
Translates to: KVTITPVLQKFPDCS*SRSRASSSEASYSD
Trigger: GTCGCTGTAGCTGGCCTCGGAGCTCGAGGCTCTGGAGCGGCTGCAGCTACAGTCCGGGAACTTCTGCAGGACGGGTGTTATAGTGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000605888.1
ENST00000639330.3
ENST00000639445.1
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCCGCCACCTTCCATGTaGGCAGGTGCCGGGTTGATG +
Preference number: 5 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYPPPSM*AGAGLM
Trigger: CATCAACCCGGCACCTGCCAACATGGAAGGTGGCGG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS CCA 90 bp CACCCTCCTTGGGCTTCCAGACCAGATGGGTGCCCCCAGAGCACCTaGCTTTACCTGATGAGGAGGAGCCTGTCCTTTTCAGATGGATGG +
Preference number: 5 (lower is better)
Translates to: HPPWASRPDGCPQST*LYLMRRSLSFSDGW
Trigger: CCATCCATCTGAAAAGGACAGGCTCCTCCTCATCAGGTAAAGCCAGGTGCTCTGGGGGCACCCATCTGGTCTGGAAGCCCAAGGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639798.1
CDS-3UTR CAA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCCCCAGACCAACAGAATaGGGATCCCCTGGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTPRPTE*GSPGRV
Trigger: AACTCTCCCAGGGGATCCCAATTCTGTTGGTCTGGG...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS CCA 90 bp AGCTTCCAGGGCTCCCCTGATGAGGAGGAGCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTGAGAGAAGCGTGTGTGGGACCACTC +
Preference number: 5 (lower is better)
Translates to: SFQGSPDEEEPVLFR*MVIQPLREACVGPL
Trigger: GAGTGGTCCCACACACGCTTCTCTCAGTGGCTGGATGACCATCCATCTGAAAAGGACAGGCTCCTCCTCATCAGGGGAGCCCTGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS CCA 90 bp GGCTGGCGTCGTGCCCTAGCCAAGGAGAAGGTGGGCACCGGAACGTaGCCGCAGCGCTTATCTGTGAAGCAAGTATTAAACCTCAGAACA +
Preference number: 5 (lower is better)
Translates to: GWRRALAKEKVGTGT*PQRLSVKQVLNLRT
Trigger: TGTTCTGAGGTTTAATACTTGCTTCACAGATAAGCGCTGCGGCCACGTTCCGGTGCCCACCTTCTCCTTGGCTAGGGCACGACGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CAA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCGCCCAATCACCTGACTaGCATCTCCTTGTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTAQSPD*HLLVWR
Trigger: TCTCCACACAAGGAGATGCAAGTCAGGTGATTGGGC...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGGCAGGTGGCTGGTGTaGGTGTCCCAGCCTAAGAGC +
Preference number: 5 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQGRWLV*VSQPKS
Trigger: GCTCTTAGGCTGGGACACCAACACCAGCCACCTGCC...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCGCACCCTGGACCTTCTaGGGGAGCTATAGAGAAATC +
Preference number: 5 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTAPWTF*GSYREI
Trigger: GATTTCTCTATAGCTCCCCAAGAAGGTCCAGGGTGC...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS GCA 90 bp GGCGTAAGGCAGGAGAGCAGAGCGGAGGTTTCAGGGAGCTTCGTTTaGCCTCCACACTCACAAGAGTCACGCGTTAGTTGCTACACAGCT +
Preference number: 5 (lower is better)
Translates to: GVRQESRAEVSGSFV*PPHSQESRVSCYTA
Trigger: AGCTGTGTAGCAACTAACGCGTGACTCTTGTGAGTGTGGAGGGCAAACGAAGCTCCCTGAAACCTCCGCTCTGCTCTCCTGCCTTACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CAA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACCCGCCACCTTCCATGTaGGCAGGTGCCGGGTTGATG +
Preference number: 5 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNPPPSM*AGAGLM
Trigger: CATCAACCCGGCACCTGCCAACATGGAAGGTGGCGG...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATGCATGGTCCTTAGGGTaGCATGGGACACAGGATTGC +
Preference number: 5 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYAWSLG*HGTQDC
Trigger: GCAATCCTGTGTCCCATGCAACCCTAAGGACCATGC...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCGCTGCTGGGTTGTTCTaGTTTCCTCCTCAGAACTGT +
Preference number: 5 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTAAGLF*FPPQNC
Trigger: ACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGC...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS CCA 90 bp GAGCACCTGGCTTTACCTGATGAGGAGGAGCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTGAGAGAAGCGTGTGTGGGACCACTC +
Preference number: 5 (lower is better)
Translates to: EHLALPDEEEPVLFR*MVIQPLREACVGPL
Trigger: GAGTGGTCCCACACACGCTTCTCTCAGTGGCTGGATGACCATCCATCTGAAAAGGACAGGCTCCTCCTCATCAGGTAAAGCCAGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639798.1
CDS-3UTR CAA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCCCCTTGCAGTTGTCCTaGGAGTCTCTTACTGAGATT +
Preference number: 5 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTPLQLS*ESLTEI
Trigger: AATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGG...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCTCTCTACTTCCCCCTaGCAGTTGTCCTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYLSTSP*QLSLES
Trigger: AGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTGCTGCTGGGTTGTTCTaGTTTCCTCCTCAGAACTGT +
Preference number: 5 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLAAGLF*FPPQNC
Trigger: ACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGC...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCCGCAACAGAGTGGGTTaGAGGAATAAGGATGACAGA +
Preference number: 5 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTRNRVG*RNKDDR
Trigger: TCTGTCATCCTTATTCCTCAAACCCACTCTGTTGCG...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATGCACCCTGGACCTTCTaGGGGAGCTATAGAGAAATC +
Preference number: 5 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYAPWTF*GSYREI
Trigger: GATTTCTCTATAGCTCCCCAAGAAGGTCCAGGGTGC...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS GCA 90 bp GGGAGCTTCGTTTGCCCTCCACACTCACAAGAGTCACGCGTTAGTTaGTACACAGCTTTATCTGTTCCACGCCTTGATTGGCACTCCTGG +
Preference number: 5 (lower is better)
Translates to: GSFVCPPHSQESRVS*YTALSVPRLDWHSW
Trigger: CCAGGAGTGCCAATCAAGGCGTGGAACAGATAAAGCTGTGTAGCAACTAACGCGTGACTCTTGTGAGTGTGGAGGGCAAACGAAGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTCCGCCACCTTCCATGTaGGCAGGTGCCGGGTTGATG +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPPPPSM*AGAGLM
Trigger: CATCAACCCGGCACCTGCCAACATGGAAGGTGGCGG...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCCCGCCACCTTCCATGTaGGCAGGTGCCGGGTTGATG +
Preference number: 5 (lower is better)
Translates to: IVVSVRLPLLDMLINVECPPPSM*AGAGLM
Trigger: CATCAACCCGGCACCTGCCAACATGGAAGGTGGCGG...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCCCTTGCAGTTGTCCTaGGAGTCTCTTACTGAGATT +
Preference number: 5 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYPLQLS*ESLTEI
Trigger: AATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAACTCTCTACTTCCCCCTaGCAGTTGTCCTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQLSTSP*QLSLES
Trigger: AGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAG...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCGGCAGGTGGCTGGTGTaGGTGTCCCAGCCTAAGAGC +
Preference number: 5 (lower is better)
Translates to: IVVSVRLPLLDMLINVECGRWLV*VSQPKS
Trigger: GCTCTTAGGCTGGGACACCAACACCAGCCACCTGCC...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCTTGCAGGGAAGAGTGTaGCTTAATAAGCCATGTATG +
Preference number: 5 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFILQGRV*LNKPCM
Trigger: CATACATGGCTTATTAAGCAACACTCTTCCCTGCAA...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATCGCAACAGAGTGGGTTaGAGGAATAAGGATGACAGA +
Preference number: 5 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYRNRVG*RNKDDR
Trigger: TCTGTCATCCTTATTCCTCAAACCCACTCTGTTGCG...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCAGCAGGACAACTGTTTaGGATGAACTCATTCCAACT +
Preference number: 5 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFISRTTV*DELIPT
Trigger: AGTTGGAATGAGTTCATCCAAAACAGTTGTCCTGCT...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTATACTCACCCTCGGTTaGTCTACAGGGGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLILTLG*STGERN
Trigger: ATTTCTTTCCCCTGTAGACAAACCGAGGGTGAGTAT...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCTTCCTTGGGCAAGTTTaGCTAGTTGTTCAGCAATTA +
Preference number: 5 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTFLGQV*LVVQQL
Trigger: TAATTGCTGAACAACTAGCAAAACTTGCCCAAGGAA...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGCCCAGACCAACAGAATaGGGATCCCCTGGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWPRPTE*GSPGRV
Trigger: AACTCTCCCAGGGGATCCCAATTCTGTTGGTCTGGG...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GTCCTTAGGGTTGCATGGGACACAGGATTGCACATCAGGGATATGAAGGTTTGGATGTGGGTACCAAGCTaGAGGGCTCAGGGTCACTTC +
Preference number: 5 (lower is better)
Translates to: VLRVAWDTGLHIRDMKVWMWVPS*RAQGHF
Trigger: GAAGTGACCCTGAGCCCTCAAGCTTGGTACCCACAT...CCAAACCTTCATATCCCTGATGTGCAATCCTGTGTCCCATGCAACCCTAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTACCGCCACCTTCCATGTaGGCAGGTGCCGGGTTGATG +
Preference number: 5 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLPPPSM*AGAGLM
Trigger: CATCAACCCGGCACCTGCCAACATGGAAGGTGGCGG...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAAGGCAACCTGAAGTCTaGCTAGTTGTGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSRQPEV*LVVQSG
Trigger: CCCGGACTGCACAACTAGCAAGACTTCAGGTTGCCT...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTTGTTGCCATATGAAATaGAGAAGAAAGTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLCCHMK*RRKCLS
Trigger: ACTCAGGCACTTTCTTCTCAATTTCATATGGCAACA...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCTGCATTAAAATTCCCTaGGATATGCTGACTGTATTG +
Preference number: 5 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFICIKIP*DMLTVL
Trigger: CAATACAGTCAGCATATCCAAGGGAATTTTAATGCA...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGGCCATATCTCGGCTTACTTCGTATCCTCGGTTCCTGGCCCAGGGCCTACCTGGTATGAATATATCTaGTGCATCATCTTCCATGTG +
Preference number: 5 (lower is better)
Translates to: QGHISAYFVSSVPGPGPTWYEYI*CIIFHV
Trigger: CACATGGAAGATGATGCACAAGATATATTCATACCA...GGTAGGCCCTGGGCCAGGAACCGAGGATACGAAGTAAGCCGAGATATGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGGGCAGGTGGCTGGTGTaGGTGTCCCAGCCTAAGAGC +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLGRWLV*VSQPKS
Trigger: GCTCTTAGGCTGGGACACCAACACCAGCCACCTGCC...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGCATGGGACACAGGATaGCACATCAGGGATATGAAG +
Preference number: 5 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNAWDTG*HIRDMK
Trigger: CTTCATATCCCTGATGTGCAATCCTGTGTCCCATGC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGTTGCAGGGAAGAGTGTaGCTTAATAAGCCATGTATG +
Preference number: 5 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLLQGRV*LNKPCM
Trigger: CATACATGGCTTATTAAGCAACACTCTTCCCTGCAA...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CGCCACTGGAAGGTGCAGTCACATGTCCATGCCCCCAGGCACTGCTCCTTCATCGAGCATGATTTTCAGTaGCTAAATATAGGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: RHWKVQSHVHAPRHCSFIEHDFQ*LNIGLA
Trigger: TGCTAAGCCTATATTTAGCAACTGAAAATCATGCTC...GATGAAGGAGCAGTGCCTGGGGGCATGGACATGTGACTGCACCTTCCAGTGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS CCA 90 bp TCACGCGTTAGTTGCTACACAGCTTTATCTGTTCCACGCCTTGATTaGCACTCCTGGGGTAATAAAAGCCCGCAGGAAATGCTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SRVSCYTALSVPRLD*HSWGNKSPQEMLGK
Trigger: CTTCCCAAGCATTTCCTGCGGGCTTTTATTACCCCAGGAGTGCCAATCAAGGCGTGGAACAGATAAAGCTGTGTAGCAACTAACGCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CAA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGTTCCTTGGGCAAGTTTaGCTAGTTGTTCAGCAATTA +
Preference number: 5 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLFLGQV*LVVQQL
Trigger: TAATTGCTGAACAACTAGCAAAACTTGCCCAAGGAA...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTGTAAATCTTCATGTCTaGCAACAACCTGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLVNLHV*QQPVSV
Trigger: TACACTTACAGGTTGTTGCAAGACATGAAGATTTAC...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTAGGCAACCTGAAGTCTaGCTAGTTGTGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPRQPEV*LVVQSG
Trigger: CCCGGACTGCACAACTAGCAAGACTTCAGGTTGCCT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGACAGGATCTCTCTTCTaGGCCAATACTTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLTGSLF*ANTFCR
Trigger: TCTACAAAAAGTATTGGCCAAGAAGAGAGATCCTGT...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GGCCAGTGGCTCATGTGGGATGTGGGTACCAAGCTTGAGGGCTCAGGGTCACTTGTAGAAAATTTCCGGTaGTCCATCCTTAACTATTTC +
Preference number: 5 (lower is better)
Translates to: GQWLMWDVGTKLEGSGSLVENFR*SILNYF
Trigger: GAAATAGTTAAGGATGGACAACCGGAAATTTTCTAC...AAGTGACCCTGAGCCCTCAAGCTTGGTACCCACATCCCACATGAGCCACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACTGGGCCAAGGCCCCATCCAGAGGCAGTCACAGACCTGAGGGCTCTTAAGTATTGTTGCCATATGAAATaGAGAAGAAAGTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: TGPRPHPEAVTDLRALKYCCHMK*RRKCLS
Trigger: ACTCAGGCACTTTCTTCTCAATTTCATATGGCAACA...ATACTTAAGAGCCCTCAGGTCTGTGACTGCCTCTGGATGGGGCCTTGGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAAAAGAAGTGGGGACTTaGGGTTTATGTACCCATAGG +
Preference number: 5 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQKEVGT*GLCTHR
Trigger: CCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGAGTATACAACAAGGTTaGCCCCAGAAGCTAAAACAA +
Preference number: 5 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLSIQQG*PQKLKQ
Trigger: TTGTTTTAGCTTCTGGGGCAAACCTTGTTGTATACT...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS GCA 90 bp GTGGGACCACTCTGCCCTCTGGAAAGGAGATTTCAGTTCAGCGGGTaGTCTCGTGAACAAAAACTGAATAATGATGCTGAACGGAATCAC +
Preference number: 5 (lower is better)
Translates to: VGPLCPLERRFQFSG*SREQKLNNDAERNH
Trigger: GTGATTCCGTTCAGCATCATTATTCAGTTTTTGTTCACGAGAGCACCCGCTGAACTGAAATCTCCTTTCCAGAGGGCAGAGTGGTCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639557.3
ENST00000639798.1
ENST00000640820.3
CDS-3UTR CAA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGAGGCAACCTGAAGTCTaGCTAGTTGTGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMRQPEV*LVVQSG
Trigger: CCCGGACTGCACAACTAGCAAGACTTCAGGTTGCCT...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CATGGGGCACTACTGGAGGGCCATGGTATCCAAGTGGCTGCTGGGTTGTTCTTGTGGTATGAATATATCTaGTGCATCATCTTCCATGTG +
Preference number: 5 (lower is better)
Translates to: HGALLEGHGIQVAAGLFLWYEYI*CIIFHV
Trigger: CACATGGAAGATGATGCACAAGATATATTCATACCA...CAAGAACAACCCAGCAGCCACTTGGATACCATGGCCCTCCAGTAGTGCCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACAAGTTCAACAGCTCTTaGGGCAATAGCCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNKFNSS*GNSLSV
Trigger: AACACTGAGGCTATTGCCCAAAGAGCTGTTGAACTT...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAAGCAGACATAGCCTTTaGAAGCAGCTGAACCATTAT +
Preference number: 5 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQSRHSL*KQLNHY
Trigger: ATAATGGTTCAGCTGCTTCAAAAGGCTATGTCTGCT...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAAATGTGCAGCCAAATTaGGAAACCACTGAGCTACAT +
Preference number: 5 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQNVQPN*ETTELH
Trigger: ATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATT...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGTGGTGGGGGCAGACTTaGCACTTACTGCAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMWWGQT*HLLQCN
Trigger: GTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCA...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCCATGGCATGCTGAGTaGATGCACCAGGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLPWHAE*MHQVAA
Trigger: TGCTGCCACCTGGTGCATCAACTCAGCATGCCATGG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS CCA 90 bp AGTCGCATTTTCCCACCTTCACCAAGAGGTCTTATGAGACTGGCATaGCGGATAAAAAGTTCAACAGCTCTTTGGGCAATAGCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SRIFPPSPRGLMRLA*RIKSSTALWAIASV
Trigger: CACTGAGGCTATTGCCCAAAGAGCTGTTGAACTTTTTATCCGCCATGCCAGTCTCATAAGACCTCTTGGTGAAGGTGGGAAAATGCGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639557.3
ENST00000639798.1
ENST00000640820.3
CDS CCA 90 bp AGTTGCTACACAGCTTTATCTGTTCCACGCCTTGATTGGCACTCCTaGGGTAATAAAAGCCCGCAGGAAATGCTTGGGAAGAAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: SCYTALSVPRLDWHS*GNKSPQEMLGKKSC
Trigger: GCAACTTTTCTTCCCAAGCATTTCCTGCGGGCTTTTATTACCCCAGGAGTGCCAATCAAGGCGTGGAACAGATAAAGCTGTGTAGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTAGGCAACCTGAAGTCTaGCTAGTTGTGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIRQPEV*LVVQSG
Trigger: CCCGGACTGCACAACTAGCAAGACTTCAGGTTGCCT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACAGGCAACCTGAAGTCTaGCTAGTTGTGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: GLSTGERNSSSDASVCKNRQPEV*LVVQSG
Trigger: CCCGGACTGCACAACTAGCAAGACTTCAGGTTGCCT...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGGGAAAAACCAAGTaGATAGGATCGAAGAGTCGA +
Preference number: 5 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALGGKTK*IGSKSR
Trigger: TCGACTCTTCGATCCTATCAACTTGGTTTTTCCCCC...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAACCCAGAAAAGTCTTCTaGATGCATGGTGATGATTAT +
Preference number: 5 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQPRKVF*MHGDDY
Trigger: ATAATCATCACCATGCATCAAGAAGACTTTTCTGGG...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCACCTTGTATCTTAGCTaGGGATGTGCCAGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: IVVSVRLPLLDMLINVECTLYLS*GCASGS
Trigger: GGAACCACTGGCACATCCCAAGCTAAGATACAAGGT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAAAAGGCCATTTAACCTaGTATCTTAGCTTGGGATGT +
Preference number: 5 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQKGHLT*YLSLGC
Trigger: ACATCCCAAGCTAAGATACAAGGTTAAATGGCCTTT...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTTGGTGGGGGCAGACTTaGCACTTACTGCAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIWWGQT*HLLQCN
Trigger: GTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCA...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCCCATGGCATGCTGAGTaGATGCACCAGGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVPWHAE*MHQVAA
Trigger: TGCTGCCACCTGGTGCATCAACTCAGCATGCCATGG...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ATCCAAGTGGCTGCTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTAGACGACTGAGTGTGTaGCAGCTGAGTGAATCTTTG +
Preference number: 5 (lower is better)
Translates to: IQVAAGLFLFPPQNCFALRRLSV*QLSESL
Trigger: CAAAGATTCACTCAGCTGCAACACACTCAGTCGTCT...AAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGGCCCGCAGGAAATGCTaGGGAAGAAAAGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLARRKC*GRKVAG
Trigger: CCCAGCAACTTTTCTTCCCAAGCATTTCCTGCGGGC...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS-3UTR CAA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGTTCAGGGAGCTTCGTTaGCCCTCCACACTCACAAGA +
Preference number: 5 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMFRELR*PSTLTR
Trigger: TCTTGTGAGTGTGGAGGGCAAACGAAGCTCCCTGAA...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS GCA 90 bp GAACAAAAACTGAATAATGATGCTGAACGGAATCACATCCCCCAATaGAGGACTACTGGCTACATGTTCACTTGCCTGGAAGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: EQKLNNDAERNHIPQ*RTTGYMFTCLEEQR
Trigger: CCTCTGCTCTTCCAGGCAAGTGAACATGTAGCCAGTAGTCCTGCATTGGGGGATGTGATTCCGTTCAGCATCATTATTCAGTTTTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639557.3
ENST00000639798.1
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAGGCAACCTGAAGTCTaGCTAGTTGTGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYRQPEV*LVVQSG
Trigger: CCCGGACTGCACAACTAGCAAGACTTCAGGTTGCCT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCCCTTGCAGTTGTCCTaGGAGTCTCTTACTGAGATT +
Preference number: 5 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWPLQLS*ESLTEI
Trigger: AATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCTCTCTACTTCCCCCTaGCAGTTGTCCTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWLSTSP*QLSLES
Trigger: AGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGCTGTTCCGACTTGAGTaGGATTCTGAGTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWLFRLE*DSESPN
Trigger: GTTTGGAGACTCAGAATCCAACTCAAGTCGGAACAG...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTAAGAGCTGTTCCGACTaGAGTTGGATTCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPKSCSD*SWILSL
Trigger: GAGACTCAGAATCCAACTCAAGTCGGAACAGCTCTT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CAGGTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAATGGTATGAATATATCTaGTGCATCATCTTCCATGTG +
Preference number: 5 (lower is better)
Translates to: QVAAAIRYYFQWRPSPGQWYEYI*CIIFHV
Trigger: CACATGGAAGATGATGCACAAGATATATTCATACCA...TTGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTGGGGGAAAAACCAAGTaGATAGGATCGAAGAGTCGA +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPGGKTK*IGSKSR
Trigger: TCGACTCTTCGATCCTATCAACTTGGTTTTTCCCCC...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGGCCCAATCACCTGACTaGCATCTCCTTGTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLAQSPD*HLLVWR
Trigger: TCTCCACACAAGGAGATGCAAGTCAGGTGATTGGGC...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGGCCCAATCACCTGACTaGCATCTCCTTGTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWAQSPD*HLLVWR
Trigger: TCTCCACACAAGGAGATGCAAGTCAGGTGATTGGGC...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCCATGGCATGCTGAGTaGATGCACCAGGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKPWHAE*MHQVAA
Trigger: TGCTGCCACCTGGTGCATCAACTCAGCATGCCATGG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTTCAAGGTCTCACCATTaGTCCTCAATTCGTGTGACC +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPSRSHH*SSIRVT
Trigger: GGTCACACGAATTGAGGACAAATGGTGAGACCTTGA...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297135.9
CDS-3UTR CAA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACCAAGTGGCTGCTGGGTaGTTCTTGTTTCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GLSTGERNSSSDASVCKNQVAAG*FLFPPQ
Trigger: CTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTG...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATATCTGTTCCACGCCTaGATTGGCACTCCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLYLFHA*IGTPGV
Trigger: TACCCCAGGAGTGCCAATCAAGGCGTGGAACAGATA...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS TCA 90 bp CCCACAGAAGTGAGTAAGGGTTGCACAGCATTTTCCATAAGAGCATaGATAGCCAGTTCTATTCAACACTGTACTGCAGATCCTGGACAG +
Preference number: 5 (lower is better)
Translates to: PTEVSKGCTAFSIRA*IASSIQHCTADPGQ
Trigger: CTGTCCAGGATCTGCAGTACAGTGTTGAATAGAACTGGCTATTCATGCTCTTATGGAAAATGCTGTGCAACCCTTACTCACTTCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464542.5
ENST00000639798.1
CDS TCA 90 bp CTATCAACAGCTCCCTGTAAAGCCCCAATTCTCGTCTGCATCATCTaGAGAACACATCATATTCTCTCCACAACCCAGTCTCAATGGGTT +
Preference number: 5 (lower is better)
Translates to: LSTAPCKAPILVCII*RTHHILSTTQSQWV
Trigger: AACCCATTGAGACTGGGTTGTGGAGAGAATATGATGTGTTCTTCAGATGATGCAGACGAGAATTGGGGCTTTACAGGGAGCTGTTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475638.6
ENST00000640273.1
CDS-3UTR CAA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGTAAATCTTCATGTCTaGCAACAACCTGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNVNLHV*QQPVSV
Trigger: TACACTTACAGGTTGTTGCAAGACATGAAGATTTAC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGACGACTCAATCCCAGTaGCTTGTGCCAGTAAATCTT +
Preference number: 5 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWTTQSQ*LVPVNL
Trigger: AAGATTTACTGGCACAAGCAACTGGGATTGAGTCGT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGCCCTTGCAGTTGTCCTaGGAGTCTCTTACTGAGATT +
Preference number: 5 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMPLQLS*ESLTEI
Trigger: AATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGG...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTCTCTCTACTTCCCCCTaGCAGTTGTCCTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: AKYRLSNSTADEITQETFLSTSP*QLSLES
Trigger: AGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAG...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATCTCTCTACTTCCCCCTaGCAGTTGTCCTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYLSTSP*QLSLES
Trigger: AGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAG...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGGGGGAAAAACCAAGTaGATAGGATCGAAGAGTCGA +
Preference number: 5 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMGGKTK*IGSKSR
Trigger: TCGACTCTTCGATCCTATCAACTTGGTTTTTCCCCC...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTGCCCAATCACCTGACTaGCATCTCCTTGTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AKYRLSNSTADEITQETFAQSPD*HLLVWR
Trigger: TCTCCACACAAGGAGATGCAAGTCAGGTGATTGGGC...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCGCCCAATCACCTGACTaGCATCTCCTTGTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVAQSPD*HLLVWR
Trigger: TCTCCACACAAGGAGATGCAAGTCAGGTGATTGGGC...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTAAGTTCAACAGCTCTTaGGGCAATAGCCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPKFNSS*GNSLSV
Trigger: AACACTGAGGCTATTGCCCAAAGAGCTGTTGAACTT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGACCTTGTATCTTAGCTaGGGATGTGCCAGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWTLYLS*GCASGS
Trigger: GGAACCACTGGCACATCCCAAGCTAAGATACAAGGT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGTGGTGGGGGCAGACTTaGCACTTACTGCAGTGCAAC +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKWWGQT*HLLQCN
Trigger: GTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCA...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAACAAGTGGCTGCTGGGTaGTTCTTGTTTCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKQVAAG*FLFPPQ
Trigger: CTGAGGAGGAAACAAGAACAACCCAGCAGCCACTTG...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACTTGACCATTCTGGGGTaGAGATTTCTGTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GLSTGERNSSSDASVCKNLTILG*RFLWVV
Trigger: CACCACCCACAGAAATCTCAACCCCAGAATGGTCAA...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp TTAAGTATAGAAGGGGCACTAGAGGCATGGGTCTGGACAAGCTCACCTGGGAACGAGCATGATTTTCAGTaGCTAAATATAGGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: LSIEGALEAWVWTSSPGNEHDFQ*LNIGLA
Trigger: TGCTAAGCCTATATTTAGCAACTGAAAATCATGCTC...GTTCCCAGGTGAGCTTGTCCAGACCCATGCCTCTAGTGCCCCTTCTATACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTCTGTTCCGACTTGAGTaGGATTCTGAGTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSILFRLE*DSESPN
Trigger: GTTTGGAGACTCAGAATCCAACTCAAGTCGGAACAG...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGAAGAGCTGTTCCGACTaGAGTTGGATTCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLKSCSD*SWILSL
Trigger: GAGACTCAGAATCCAACTCAAGTCGGAACAGCTCTT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GGTTTGTCTACAGGGGAAAGAAATTCATCCAGTGATGCTTCAGTATGCAAGAACAAGAGCTGTTCCGACTaGAGTTGGATTCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: GLSTGERNSSSDASVCKNKSCSD*SWILSL
Trigger: GAGACTCAGAATCCAACTCAAGTCGGAACAGCTCTT...GTTCTTGCATACTGAAGCATCACTGGATGAATTTCTTTCCCCTGTAGACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTGACTGGAAACAACCTTaGTTACTGATTGGTGCAACT +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPDWKQP*LLIGAT
Trigger: AGTTGCACCAATCAGTAACAAAGGTTGTTTCCAGTC...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297135.9
CDS-3UTR CAA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGACTGGTGCAAATTCTTaGCCTTCTCTACTTCTCACT +
Preference number: 5 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWTGANS*PSLLLT
Trigger: AGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAGT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCAGCAGACATAGCCTTTaGAAGCAGCTGAACCATTAT +
Preference number: 5 (lower is better)
Translates to: IVVSVRLPLLDMLINVECSRHSL*KQLNHY
Trigger: ATAATGGTTCAGCTGCTTCAAAAGGCTATGTCTGCT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATACCTTGTATCTTAGCTaGGGATGTGCCAGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYTLYLS*GCASGS
Trigger: GGAACCACTGGCACATCCCAAGCTAAGATACAAGGT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTTAGAACCACCTCATCATGTCAGCCCCACTCTGGCTTTAGGGAACTCAACTCAAGTATACAACAAGGTTaGCCCCAGAAGCTAAAACAA +
Preference number: 5 (lower is better)
Translates to: FRTTSSCQPHSGFRELNSSIQQG*PQKLKQ
Trigger: TTGTTTTAGCTTCTGGGGCAAACCTTGTTGTATACT...TGAGTTGAGTTCCCTAAAGCCAGAGTGGGGCTGACATGATGAGGTGGTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS TCA 90 bp CCCACAGAAGTGAGTAAGGGTTGCACAGCATTTTCCATAAGAGCATaGATAGCCAGTTCTATTCAACACTGTACTGCAGATCCTTTAGAG +
Preference number: 5 (lower is better)
Translates to: PTEVSKGCTAFSIRA*IASSIQHCTADPLE
Trigger: CTCTAAAGGATCTGCAGTACAGTGTTGAATAGAACTGGCTATTCATGCTCTTATGGAAAATGCTGTGCAACCCTTACTCACTTCTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462342.1
ENST00000468350.5
ENST00000638286.1
ENST00000638872.1
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTTTCCTTGGGCAAGTTTaGCTAGTTGTTCAGCAATTA +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPFLGQV*LVVQQL
Trigger: TAATTGCTGAACAACTAGCAAAACTTGCCCAAGGAA...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGACGACTCAATCCCAGTaGCTTGTGCCAGTAAATCTT +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWTTQSQ*LVPVNL
Trigger: AAGATTTACTGGCACAAGCAACTGGGATTGAGTCGT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGACGACTCAATCCCAGTaGCTTGTGCCAGTAAATCTT +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLTTQSQ*LVPVNL
Trigger: AAGATTTACTGGCACAAGCAACTGGGATTGAGTCGT...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCACTCTCTACTTCCCCCTaGCAGTTGTCCTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSLSTSP*QLSLES
Trigger: AGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAG...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAAAGAGCTGTTCCGACTaGAGTTGGATTCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKKSCSD*SWILSL
Trigger: GAGACTCAGAATCCAACTCAAGTCGGAACAGCTCTT...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAAGAGCTGTTCCGACTaGAGTTGGATTCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYKSCSD*SWILSL
Trigger: GAGACTCAGAATCCAACTCAAGTCGGAACAGCTCTT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTACAGGATCTCTCTTCTaGGCCAATACTTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPTGSLF*ANTFCR
Trigger: TCTACAAAAAGTATTGGCCAAGAAGAGAGATCCTGT...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTTGTTGCCATATGAAATaGAGAAGAAAGTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPCCHMK*RRKCLS
Trigger: ACTCAGGCACTTTCTTCTCAATTTCATATGGCAACA...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAGCCCAATCACCTGACTaGCATCTCCTTGTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSAQSPD*HLLVWR
Trigger: TCTCCACACAAGGAGATGCAAGTCAGGTGATTGGGC...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTCCCAGAAAAGTCTTCTaGATGCATGGTGATGATTAT +
Preference number: 5 (lower is better)
Translates to: VGADFALTAVQHLHFNFPPRKVF*MHGDDY
Trigger: ATAATCATCACCATGCATCAAGAAGACTTTTCTGGG...AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGAAAGGCCATTTAACCTaGTATCTTAGCTTGGGATGT +
Preference number: 5 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWKGHLT*YLSLGC
Trigger: ACATCCCAAGCTAAGATACAAGGTTAAATGGCCTTT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTCAGCTGAGTGAATCTTaGGGACTCGGGAAAAATAAT +
Preference number: 5 (lower is better)
Translates to: GRVENDFKSYFRDATEWVQLSES*GLGKNN
Trigger: ATTATTTTTCCCGAGTCCCAAAGATTCACTCAGCTG...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTAGACGACTGAGTGTGTaGCAGCTGAGTGAATCTTTG +
Preference number: 5 (lower is better)
Translates to: AKYRLSNSTADEITQETFRRLSV*QLSESL
Trigger: CAAAGATTCACTCAGCTGCAACACACTCAGTCGTCT...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS GCA 90 bp TTTGAAGCAGCTGAACCATTATGGGATAAACTGGTGCAAATTCTTTaGCTTCTCTACTTCTCACTGATTGAACATAAGCTTCCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: FEAAEPLWDKLVQIL*LLYFSLIEHKLPGL
Trigger: GAGCCCTGGAAGCTTATGTTCAATCAGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAGTTTATCCCATAATGGTTCAGCTGCTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGTTCCTTGGGCAAGTTTaGCTAGTTGTTCAGCAATTA +
Preference number: 5 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMFLGQV*LVVQQL
Trigger: TAATTGCTGAACAACTAGCAAAACTTGCCCAAGGAA...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTACGACTCAATCCCAGTaGCTTGTGCCAGTAAATCTT +
Preference number: 5 (lower is better)
Translates to: AKYRLSNSTADEITQETFTTQSQ*LVPVNL
Trigger: AAGATTTACTGGCACAAGCAACTGGGATTGAGTCGT...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGCTGTTCCGACTTGAGTaGGATTCTGAGTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKLFRLE*DSESPN
Trigger: GTTTGGAGACTCAGAATCCAACTCAAGTCGGAACAG...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGGTAGAAAATTTCCGGTaGTCCATCCTTAACTATTTC +
Preference number: 5 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWVENFR*SILNYF
Trigger: GAAATAGTTAAGGATGGACAACCGGAAATTTTCTAC...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCTGGTATGAATATATCTaGTGCATCATCTTCCATGTG +
Preference number: 5 (lower is better)
Translates to: IVVSVRLPLLDMLINVECWYEYI*CIIFHV
Trigger: CACATGGAAGATGATGCACAAGATATATTCATACCA...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGGGGGAAAAACCAAGTaGATAGGATCGAAGAGTCGA +
Preference number: 5 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRGGKTK*IGSKSR
Trigger: TCGACTCTTCGATCCTATCAACTTGGTTTTTCCCCC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCAAGTTCAACAGCTCTTaGGGCAATAGCCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVKFNSS*GNSLSV
Trigger: AACACTGAGGCTATTGCCCAAAGAGCTGTTGAACTT...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAAGTTCAACAGCTCTTaGGGCAATAGCCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYKFNSS*GNSLSV
Trigger: AACACTGAGGCTATTGCCCAAAGAGCTGTTGAACTT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTACTGGTGCAAATTCTTaGCCTTCTCTACTTCTCACT +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSITGANS*PSLLLT
Trigger: AGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAGT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGAGCAGACATAGCCTTTaGAAGCAGCTGAACCATTAT +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWSRHSL*KQLNHY
Trigger: ATAATGGTTCAGCTGCTTCAAAAGGCTATGTCTGCT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAAAGAAGTGGGGACTTaGGGTTTATGTACCCATAGG +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYKEVGT*GLCTHR
Trigger: CCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGAATGTGCAGCCAAATTaGGAAACCACTGAGCTACAT +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWNVQPN*ETTELH
Trigger: ATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTAATGTGCAGCCAAATTaGGAAACCACTGAGCTACAT +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSINVQPN*ETTELH
Trigger: ATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCGGTTCCTCAACTTTGTaGTCTATTGGAATCATTTTG +
Preference number: 5 (lower is better)
Translates to: IVVSVRLPLLDMLINVECGSSTL*SIGIIL
Trigger: CAAAATGATTCCAATAGACAACAAAGTTGAGGAACC...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ATAGTGGTGTCTGTCAGGCTCCCACTCCTAGACATGTTAATTAATGTGGAGTGCATTAGAGCAAATACATaGGCAATACAGCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: IVVSVRLPLLDMLINVECIRANT*AIQLLL
Trigger: CAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAAT...GCACTCCACATTAATTAACATGTCTAGGAGTGGGAGCCTGACAGACACCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp AAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGGACTGCTGTTTATACATaGGCTCCTTACTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: KKWGLWVYVPIGGLGYGWTAVYT*APYCLL
Trigger: TAATAAGCAGTAAGGAGCCAATGTATAAACAGCAGT...CCATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGACGACTCAATCCCAGTaGCTTGTGCCAGTAAATCTT +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKTTQSQ*LVPVNL
Trigger: AAGATTTACTGGCACAAGCAACTGGGATTGAGTCGT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCACCCTTGCAGTTGTCCTaGGAGTCTCTTACTGAGATT +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSPLQLS*ESLTEI
Trigger: AATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGG...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTCTGTTCCGACTTGAGTaGGATTCTGAGTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: LFPIYSAAVVTLSSICPILFRLE*DSESPN
Trigger: GTTTGGAGACTCAGAATCCAACTCAAGTCGGAACAG...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAAAGAGCTGTTCCGACTaGAGTTGGATTCTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSKSCSD*SWILSL
Trigger: GAGACTCAGAATCCAACTCAAGTCGGAACAGCTCTT...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTACAGGATCTCTCTTCTaGGCCAATACTTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSITGSLF*ANTFCR
Trigger: TCTACAAAAAGTATTGGCCAAGAAGAGAGATCCTGT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAACAGGATCTCTCTTCTaGGCCAATACTTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLTGSLF*ANTFCR
Trigger: TCTACAAAAAGTATTGGCCAAGAAGAGAGATCCTGT...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTTGCATTAAAATTCCCTaGGATATGCTGACTGTATTG +
Preference number: 5 (lower is better)
Translates to: GRVENDFKSYFRDATEWVCIKIP*DMLTVL
Trigger: CAATACAGTCAGCATATCCAAGGGAATTTTAATGCA...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTGGGGGAAAAACCAAGTaGATAGGATCGAAGAGTCGA +
Preference number: 5 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSGGKTK*IGSKSR
Trigger: TCGACTCTTCGATCCTATCAACTTGGTTTTTCCCCC...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGGGGGAAAAACCAAGTaGATAGGATCGAAGAGTCGA +
Preference number: 5 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIGGKTK*IGSKSR
Trigger: TCGACTCTTCGATCCTATCAACTTGGTTTTTCCCCC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGACTGGAAACAACCTTaGTTACTGATTGGTGCAACT +
Preference number: 5 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKDWKQP*LLIGAT
Trigger: AGTTGCACCAATCAGTAACAAAGGTTGTTTCCAGTC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCGACTGGAAACAACCTTaGTTACTGATTGGTGCAACT +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVDWKQP*LLIGAT
Trigger: AGTTGCACCAATCAGTAACAAAGGTTGTTTCCAGTC...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297135.9
ENST00000639557.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGCCCAGAAAAGTCTTCTaGATGCATGGTGATGATTAT +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWPRKVF*MHGDDY
Trigger: ATAATCATCACCATGCATCAAGAAGACTTTTCTGGG...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTGATAGTAGCAGTCTTTaGGAGTATGTGTTTAACTGC +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIDSSSL*EYVFNC
Trigger: GCAGTTAAACACATACTCCAAAAGACTGCTACTATC...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGAAAGGCCATTTAACCTaGTATCTTAGCTTGGGATGT +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWKGHLT*YLSLGC
Trigger: ACATCCCAAGCTAAGATACAAGGTTAAATGGCCTTT...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATACTGCAGTGCAACACTaGCACTTTAATTTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYTAVQH*HFNFPP
Trigger: TGGAGGAAAATTAAAGTGCAAGTGTTGCACTGCAGT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp AAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGATGAATATGAGTGAGGATTaGCTTTCTCCATTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: KEVGTLGLCTHRRTWLWMNMSED*LSPLEH
Trigger: ATGCTCTAATGGAGAAAGCAAATCCTCACTCATATT...CATCCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAACAGCTGAGTGAATCTTaGGGACTCGGGAAAAATAAT +
Preference number: 5 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKQLSES*GLGKNN
Trigger: ATTATTTTTCCCGAGTCCCAAAGATTCACTCAGCTG...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp GGGAGAGTTGAGAATGACTTCAAGAGCTATTTTAGAGACGCAACAGAGTGGGTTTACACTATCCTCAATTaGCCCTATTTTATGACAACC +
Preference number: 5 (lower is better)
Translates to: GRVENDFKSYFRDATEWVYTILN*PYFMTT
Trigger: GGTTGTCATAAAATAGGGCAAATTGAGGATAGTGTA...AACCCACTCTGTTGCGTCTCTAAAATAGCTCTTGAAGTCATTCTCAACTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGGTAAATCTTCATGTCTaGCAACAACCTGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLVNLHV*QQPVSV
Trigger: TACACTTACAGGTTGTTGCAAGACATGAAGATTTAC...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTACGACTCAATCCCAGTaGCTTGTGCCAGTAAATCTT +
Preference number: 5 (lower is better)
Translates to: LFPIYSAAVVTLSSICPITTQSQ*LVPVNL
Trigger: AAGATTTACTGGCACAAGCAACTGGGATTGAGTCGT...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGGTAGAAAATTTCCGGTaGTCCATCCTTAACTATTTC +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLVENFR*SILNYF
Trigger: GAAATAGTTAAGGATGGACAACCGGAAATTTTCTAC...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CCTTTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTAGTAGAAAATTTCCGGTaGTCCATCCTTAACTATTTC +
Preference number: 5 (lower is better)
Translates to: PLKEVGTLGLCTHRRTWLVENFR*SILNYF
Trigger: GAAATAGTTAAGGATGGACAACCGGAAATTTTCTAC...TAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTAAAAGAAGTGGGGACTTTGGGTTTATGTACCCATAGGAGGACTTGGTTATGGGTAGAAAATTTCCGGTaGTCCATCCTTAACTATTTC +
Preference number: 5 (lower is better)
Translates to: LKEVGTLGLCTHRRTWLWVENFR*SILNYF
Trigger: GAAATAGTTAAGGATGGACAACCGGAAATTTTCTAC...CCATAACCAAGTCCTCCTATGGGTACATAAACCCAAAGTCCCCACTTCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCTGTTGCCATATGAAATaGAGAAGAAAGTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVCCHMK*RRKCLS
Trigger: ACTCAGGCACTTTCTTCTCAATTTCATATGGCAACA...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTTGCATTAAAATTCCCTaGGATATGCTGACTGTATTG +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSICIKIP*DMLTVL
Trigger: CAATACAGTCAGCATATCCAAGGGAATTTTAATGCA...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTTGGTATGAATATATCTaGTGCATCATCTTCCATGTG +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSIWYEYI*CIIFHV
Trigger: CACATGGAAGATGATGCACAAGATATATTCATACCA...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GCTAAATATAGGCTTAGCAACAGCACTGCTGATGAAATCACTCAGGAGACATTTCCCAGAAAAGTCTTCTaGATGCATGGTGATGATTAT +
Preference number: 5 (lower is better)
Translates to: AKYRLSNSTADEITQETFPRKVF*MHGDDY
Trigger: ATAATCATCACCATGCATCAAGAAGACTTTTCTGGG...AAATGTCTCCTGAGTGATTTCATCAGCAGTGCTGTTGCTAAGCCTATATTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTAAGTTCAACAGCTCTTaGGGCAATAGCCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIKFNSS*GNSLSV
Trigger: AACACTGAGGCTATTGCCCAAAGAGCTGTTGAACTT...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTAAGTTCAACAGCTCTTaGGGCAATAGCCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSKFNSS*GNSLSV
Trigger: AACACTGAGGCTATTGCCCAAAGAGCTGTTGAACTT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGACTGGTGCAAATTCTTaGCCTTCTCTACTTCTCACT +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKTGANS*PSLLLT
Trigger: AGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAGT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAAAAGAAGTGGGGACTTaGGGTTTATGTACCCATAGG +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSKEVGT*GLCTHR
Trigger: CCTATGGGTACATAAACCCAAAGTCCCCACTTCTTT...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTAGTGGTTCCTCAACTTaGTTGTCTATTGGAATCATT +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSISGSST*LSIGII
Trigger: AATGATTCCAATAGACAACAAAGTTGAGGAACCACT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGACTGCAGTGCAACACTaGCACTTTAATTTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKTAVQH*HFNFPP
Trigger: TGGAGGAAAATTAAAGTGCAAGTGTTGCACTGCAGT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGTCTATTACTGCTGTTTATACATaGGCTCCTTACTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: TLYLSLGCASGSSTLLSITAVYT*APYCLL
Trigger: TAATAAGCAGTAAGGAGCCAATGTATAAACAGCAGT...AATAGACAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CATTTAACCTTGTATCTTAGCTTGGGATGTGCCAGTGGTTCCTCAACTTTGTTGCAGGTAATAATAGGCTaGAAAATTGATATCCTGTGG +
Preference number: 5 (lower is better)
Translates to: HLTLYLSLGCASGSSTLLQVIIG*KIDILW
Trigger: CCACAGGATATCAATTTTCAAGCCTATTATTACCTG...CAACAAAGTTGAGGAACCACTGGCACATCCCAAGCTAAGATACAAGGTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAAGGATGACAGAGGAGTaGAATGATGATGTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKRMTEE*NDDVKV
Trigger: AACCTTTACATCATCATTCAACTCCTCTGTCATCCT...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGTTCCTTGGGCAAGTTTaGCTAGTTGTTCAGCAATTA +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKFLGQV*LVVQQL
Trigger: TAATTGCTGAACAACTAGCAAAACTTGCCCAAGGAA...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATTCCTTGGGCAAGTTTaGCTAGTTGTTCAGCAATTA +
Preference number: 5 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRFLGQV*LVVQQL
Trigger: TAATTGCTGAACAACTAGCAAAACTTGCCCAAGGAA...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCGTAAATCTTCATGTCTaGCAACAACCTGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVVNLHV*QQPVSV
Trigger: TACACTTACAGGTTGTTGCAAGACATGAAGATTTAC...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAACAGGATCTCTCTTCTaGGCCAATACTTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRTGSLF*ANTFCR
Trigger: TCTACAAAAAGTATTGGCCAAGAAGAGAGATCCTGT...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAAGTAGAAAATTTCCGGTaGTCCATCCTTAACTATTTC +
Preference number: 5 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKVENFR*SILNYF
Trigger: GAAATAGTTAAGGATGGACAACCGGAAATTTTCTAC...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCTGCATTAAAATTCCCTaGGATATGCTGACTGTATTG +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVCIKIP*DMLTVL
Trigger: CAATACAGTCAGCATATCCAAGGGAATTTTAATGCA...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTGACTGGAAACAACCTTaGTTACTGATTGGTGCAACT +
Preference number: 5 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIDWKQP*LLIGAT
Trigger: AGTTGCACCAATCAGTAACAAAGGTTGTTTCCAGTC...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGACCCAGAAAAGTCTTCTaGATGCATGGTGATGATTAT +
Preference number: 5 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRPRKVF*MHGDDY
Trigger: ATAATCATCACCATGCATCAAGAAGACTTTTCTGGG...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAACTGGTGCAAATTCTTaGCCTTCTCTACTTCTCACT +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSTGANS*PSLLLT
Trigger: AGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAGT...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAAGCAGACATAGCCTTTaGAAGCAGCTGAACCATTAT +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSSRHSL*KQLNHY
Trigger: ATAATGGTTCAGCTGCTTCAAAAGGCTATGTCTGCT...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGGATAGTAGCAGTCTTTaGGAGTATGTGTTTAACTGC +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKDSSSL*EYVFNC
Trigger: GCAGTTAAACACATACTCCAAAAGACTGCTACTATC...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATGGTTCCTCAACTTTGTaGTCTATTGGAATCATTTTG +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYGSSTL*SIGIIL
Trigger: CAAAATGATTCCAATAGACAACAAAGTTGAGGAACC...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCAGTGGTTCCTCAACTTaGTTGTCTATTGGAATCATT +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVSGSST*LSIGII
Trigger: AATGATTCCAATAGACAACAAAGTTGAGGAACCACT...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATAGTGGTTCCTCAACTTaGTTGTCTATTGGAATCATT +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYSGSST*LSIGII
Trigger: AATGATTCCAATAGACAACAAAGTTGAGGAACCACT...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGAAAGGCCATTTAACCTaGTATCTTAGCTTGGGATGT +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKKGHLT*YLSLGC
Trigger: ACATCCCAAGCTAAGATACAAGGTTAAATGGCCTTT...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTACTGCAGTGCAACACTaGCACTTTAATTTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSTAVQH*HFNFPP
Trigger: TGGAGGAAAATTAAAGTGCAAGTGTTGCACTGCAGT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp GTGATTGGTATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATCAGGTAATAATAGGCTaGAAAATTGATATCCTGTGG +
Preference number: 5 (lower is better)
Translates to: VIGMNVQPNLETTELHAYQVIIG*KIDILW
Trigger: CCACAGGATATCAATTTTCAAGCCTATTATTACCTG...ATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCATACCAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGCCAACTATGAATGGGTTAGCACAAAGTGGAGATGAACAAAGATTTCATGTCCAGGTAATAATAGGCTaGAAAATTGATATCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LPTMNGLAQSGDEQRFHVQVIIG*KIDILW
Trigger: CCACAGGATATCAATTTTCAAGCCTATTATTACCTG...GACATGAAATCTTTGTTCATCTCCACTTTGTGCTAACCCATTCATAGTTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTGGGTTGTTCTTGTTTCCTCCTCAGAACTGTTTCGCACTTGGGTATTTTTAAATACACTATCCTCAATTaGCCCTATTTTATGACAACC +
Preference number: 5 (lower is better)
Translates to: LGCSCFLLRTVSHLGIFKYTILN*PYFMTT
Trigger: GGTTGTCATAAAATAGGGCAAATTGAGGATAGTGTA...TTTAAAAATACCCAAGTGCGAAACAGTTCTGAGGAGGAAACAAGAACAACCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ATGAATGTGCAGCCAAATTTGGAAACCACTGAGCTACATGCTTATTTAGTGAAGGTAAATCTTCATGTCTaGCAACAACCTGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: MNVQPNLETTELHAYLVKVNLHV*QQPVSV
Trigger: TACACTTACAGGTTGTTGCAAGACATGAAGATTTAC...CTTCACTAAATAAGCATGTAGCTCAGTGGTTTCCAAATTTGGCTGCACATTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTACAGGATCTCTCTTCTaGGCCAATACTTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: LFPIYSAAVVTLSSICPITGSLF*ANTFCR
Trigger: TCTACAAAAAGTATTGGCCAAGAAGAGAGATCCTGT...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTGTTGCCATATGAAATaGAGAAGAAAGTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSCCHMK*RRKCLS
Trigger: ACTCAGGCACTTTCTTCTCAATTTCATATGGCAACA...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCATGTTGCCATATGAAATaGAGAAGAAAGTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSCCHMK*RRKCLS
Trigger: ACTCAGGCACTTTCTTCTCAATTTCATATGGCAACA...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CTATTTCCCATTTATTCAGCAGCAGTAGTTACACTATCCTCAATTTGCCCTATTCCCAGAAAAGTCTTCTaGATGCATGGTGATGATTAT +
Preference number: 5 (lower is better)
Translates to: LFPIYSAAVVTLSSICPIPRKVF*MHGDDY
Trigger: ATAATCATCACCATGCATCAAGAAGACTTTTCTGGG...AATAGGGCAAATTGAGGATAGTGTAACTACTGCTGCTGAATAAATGGGAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393603.7
ENST00000639330.3
CDS-3UTR CAA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAGGTTCCTCAACTTTGTaGTCTATTGGAATCATTTTG +
Preference number: 5 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRGSSTL*SIGIIL
Trigger: CAAAATGATTCCAATAGACAACAAAGTTGAGGAACC...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS-3UTR CAA 90 bp TTTTGGAGTATGTGTTTAACTGCCAACTATGAATGGGTTAGCACAAAGTGGAGAATTAGAGCAAATACATaGGCAATACAGCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: FWSMCLTANYEWVSTKWRIRANT*AIQLLL
Trigger: CAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAAT...TCTCCACTTTGTGCTAACCCATTCATAGTTGGCAGTTAAACACATACTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTGTAAATCTTCATGTCTaGCAACAACCTGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSVNLHV*QQPVSV
Trigger: TACACTTACAGGTTGTTGCAAGACATGAAGATTTAC...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp TTTATTTCCACAGGGCTCACAACAACATTAAACCAGGATGCTTATGTTCTTAAGTGGTATGAATATATCTaGTGCATCATCTTCCATGTG +
Preference number: 5 (lower is better)
Translates to: FISTGLTTTLNQDAYVLKWYEYI*CIIFHV
Trigger: CACATGGAAGATGATGCACAAGATATATTCATACCA...CTTAAGAACATAAGCATCCTGGTTTAATGTTGTTGTGAGCCCTGTGGAAATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297135.9
CDS-3UTR CAA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTATTAGAGCAAATACATaGGCAATACAGCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSIRANT*AIQLLL
Trigger: CAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAAT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp ACTTACCAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTACTGCTGTTTATACATaGGCTCCTTACTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: TYQVVFLVRNHSCKIDFSTAVYT*APYCLL
Trigger: TAATAAGCAGTAAGGAGCCAATGTATAAACAGCAGT...ACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTGGTAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS-3UTR CAA 90 bp CAAGTGGTGTTTCTGGTTAGGAATCACAGCTGTAAAATTGATTTCAGTTCATCAAATATGAGTGAGGATTaGCTTTCTCCATTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: QVVFLVRNHSCKIDFSSSNMSED*LSPLEH
Trigger: ATGCTCTAATGGAGAAAGCAAATCCTCACTCATATT...TGATGAACTGAAATCAATTTTACAGCTGTGATTCCTAACCAGAAACACCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000640820.3
CDS GCA 72 bp CGCAGGTACTCGAGCAGTGGGCGCCCAGGGTCCGAGTaGTCTGCGCCCAGCGCACCGAGGGAGCCAAGGCCG +
Preference number: 6 (lower is better)
Translates to: RRYSSSGRPGSE*SAPSAPREPRP
Trigger: CGGCCTTGGCTCCCTCGGTGCGCTGGGCGCAGAGCACTCGGACCCTGGGCGCCCACTGCTCGAGTACCTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
CDS GCA 72 bp CAGCAGCTCAGGGCCGCGCCCCCTGGGCTGGCGTCGTaGCCTAGCCAAGGAGAAGGTGGGCACCGGAACGTG +
Preference number: 6 (lower is better)
Translates to: QQLRAAPPGLAS*PSQGEGGHRNV
Trigger: CACGTTCCGGTGCCCACCTTCTCCTTGGCTAGGGCACGACGCCAGCCCAGGGGGCGCGGCCCTGAGCTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
CDS CCA 72 bp GTCTCTCGCAGCAGCTCAGGGCCGCGCCCCCTGGGCTaGCGTCGTGCCCTAGCCAAGGAGAAGGTGGGCACC +
Preference number: 6 (lower is better)
Translates to: VSRSSSGPRPLG*RRALAKEKVGT
Trigger: GGTGCCCACCTTCTCCTTGGCTAGGGCACGACGCCAGCCCAGGGGGCGCGGCCCTGAGCTGCTGCGAGAGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
CDS GCA 72 bp CAGAGCCTCGAGCTCCGAGGCCAGCTACAGCGACGCTaGCGCCGCCACCTTCCATGTTGGCAGGTGCCGGGT +
Preference number: 6 (lower is better)
Translates to: QSLELRGQLQRR*RRHLPCWQVPG
Trigger: ACCCGGCACCTGCCAACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTGGCCTCGGAGCTCGAGGCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000605888.1
ENST00000639330.3
ENST00000639445.1
ENST00000639557.3
ENST00000640820.3
CDS CAA 90 bp GCTCCGAGGCCAGCTACAGCGACGCTGCCGCCGCCACCTTCCATGTaGGCAGGTGCCGGGTTGATGTCGTCAGCAGCAGAACGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: APRPATATLPPPPSM*AGAGLMSSAAERLR
Trigger: GCGGAGCCGTTCTGCTGCTGACGACATCAACCCGGCACCTGCCAACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTGGCCTCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347053.8
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
ENST00000640820.3
CDS CAA 90 bp ACAGCGACGCTGCCGCCGCCACCTTCCATGTTGGCAGGTGCCGGGTaGATGTCGTCAGCAGCAGAACGGCTCCGCCCAGGTGGTGACGCA +
Preference number: 6 (lower is better)
Translates to: TATLPPPPSMLAGAG*MSSAAERLRPGGDA
Trigger: TGCGTCACCACCTGGGCGGAGCCGTTCTGCTGCTGACGACATCAACCCGGCACCTGCCAACATGGAAGGTGGCGGCGGCAGCGTCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347053.8
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
ENST00000640820.3
CDS TCA 72 bp TGCCGCCGCCACCTTCCATGTTGGCAGGTGCCGGGTTaGTGTCGTCAGCAGCAGAACGGCTCCGCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: CRRHLPCWQVPG*CRQQQNGSAQV
Trigger: CACCTGGGCGGAGCCGTTCTGCTGCTGACGACATCAACCCGGCACCTGCCAACATGGAAGGTGGCGGCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347053.8
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
ENST00000640820.3
CDS CAA 72 bp CTGCCGCCGCCACCTTCCATGTTGGCAGGTGCCGGGTaGATGTCGTCAGCAGCAGAACGGCTCCGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: LPPPPSMLAGAG*MSSAAERLRPG
Trigger: ACCTGGGCGGAGCCGTTCTGCTGCTGACGACATCAACCCGGCACCTGCCAACATGGAAGGTGGCGGCGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347053.8
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
ENST00000640820.3
CDS GCA 72 bp ATAACACCCGTCCTGCAGAAGTTCCCGGACTGTAGCTaGAGCCGCTCCAGAGCCTCGAGCTCCGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ITPVLQKFPDCS*SRSRASSSEAS
Trigger: GCTGGCCTCGGAGCTCGAGGCTCTGGAGCGGCTGCAGCTACAGTCCGGGAACTTCTGCAGGACGGGTGTTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000605888.1
ENST00000639330.3
ENST00000639445.1
ENST00000639557.3
ENST00000640820.3
CDS CAA 72 bp CCAGCTACAGCGACGCTGCCGCCGCCACCTTCCATGTaGGCAGGTGCCGGGTTGATGTCGTCAGCAGCAGAA +
Preference number: 6 (lower is better)
Translates to: PATATLPPPPSM*AGAGLMSSAAE
Trigger: TTCTGCTGCTGACGACATCAACCCGGCACCTGCCAACATGGAAGGTGGCGGCGGCAGCGTCGCTGTAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347053.8
ENST00000393603.7
ENST00000605888.1
ENST00000639330.3
ENST00000639445.1
ENST00000639557.3
ENST00000640820.3
CDS GCA 72 bp CATCCCCACCCTCCTTGGGCTTCCAGACCAGATGGGTaGCCCCAGAGCACCTGGCTTTACCTGATGAGGAGG +
Preference number: 6 (lower is better)
Translates to: HPHPPWASRPDG*PQSTWLYLMRR
Trigger: CCTCCTCATCAGGTAAAGCCAGGTGCTCTGGGGGCACCCATCTGGTCTGGAAGCCCAAGGAGGGTGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639798.1
CDS GCA 72 bp CAGGAGAGCAGAGCGGAGGTTTCAGGGAGCTTCGTTTaGCCTCCACACTCACAAGAGTCACGCGTTAGTTGC +
Preference number: 6 (lower is better)
Translates to: QESRAEVSGSFV*PPHSQESRVSC
Trigger: GCAACTAACGCGTGACTCTTGTGAGTGTGGAGGGCAAACGAAGCTCCCTGAAACCTCCGCTCTGCTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS CCA 72 bp GGCTCCCCTGATGAGGAGGAGCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTGAGAGAAGCGTGTGTG +
Preference number: 6 (lower is better)
Translates to: GSPDEEEPVLFR*MVIQPLREACV
Trigger: CACACACGCTTCTCTCAGTGGCTGGATGACCATCCATCTGAAAAGGACAGGCTCCTCCTCATCAGGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS CCA 72 bp CGTGCCCTAGCCAAGGAGAAGGTGGGCACCGGAACGTaGCCGCAGCGCTTATCTGTGAAGCAAGTATTAAAC +
Preference number: 6 (lower is better)
Translates to: RALAKEKVGTGT*PQRLSVKQVLN
Trigger: GTTTAATACTTGCTTCACAGATAAGCGCTGCGGCCACGTTCCGGTGCCCACCTTCTCCTTGGCTAGGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
CDS CCA 72 bp GCTTTACCTGATGAGGAGGAGCCTGTCCTTTTCAGATaGATGGTCATCCAGCCACTGAGAGAAGCGTGTGTG +
Preference number: 6 (lower is better)
Translates to: ALPDEEEPVLFR*MVIQPLREACV
Trigger: CACACACGCTTCTCTCAGTGGCTGGATGACCATCCATCTGAAAAGGACAGGCTCCTCCTCATCAGGTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639798.1
CDS CAA 72 bp GCGTTAGTTGCTACACAGCTTTATCTGTTCCACGCCTaGATTGGCACTCCTGGGGTAATAAAAGCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: ALVATQLYLFHA*IGTPGVIKARR
Trigger: CCTGCGGGCTTTTATTACCCCAGGAGTGCCAATCAAGGCGTGGAACAGATAAAGCTGTGTAGCAACTAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS GCA 72 bp GTTTGCCCTCCACACTCACAAGAGTCACGCGTTAGTTaGTACACAGCTTTATCTGTTCCACGCCTTGATTGG +
Preference number: 6 (lower is better)
Translates to: VCPPHSQESRVS*YTALSVPRLDW
Trigger: CCAATCAAGGCGTGGAACAGATAAAGCTGTGTAGCAACTAACGCGTGACTCTTGTGAGTGTGGAGGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS CCA 72 bp ACAGCTTTATCTGTTCCACGCCTTGATTGGCACTCCTaGGGTAATAAAAGCCCGCAGGAAATGCTTGGGAAG +
Preference number: 6 (lower is better)
Translates to: TALSVPRLDWHS*GNKSPQEMLGK
Trigger: CTTCCCAAGCATTTCCTGCGGGCTTTTATTACCCCAGGAGTGCCAATCAAGGCGTGGAACAGATAAAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS CAA 90 bp AAGAGTCACGCGTTAGTTGCTACACAGCTTTATCTGTTCCACGCCTaGATTGGCACTCCTGGGGTAATAAAAGCCCGCAGGAAATGCTTG +
Preference number: 6 (lower is better)
Translates to: KSHALVATQLYLFHA*IGTPGVIKARRKCL
Trigger: CAAGCATTTCCTGCGGGCTTTTATTACCCCAGGAGTGCCAATCAAGGCGTGGAACAGATAAAGCTGTGTAGCAACTAACGCGTGACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS CCA 72 bp AGTTGCTACACAGCTTTATCTGTTCCACGCCTTGATTaGCACTCCTGGGGTAATAAAAGCCCGCAGGAAATG +
Preference number: 6 (lower is better)
Translates to: SCYTALSVPRLD*HSWGNKSPQEM
Trigger: CATTTCCTGCGGGCTTTTATTACCCCAGGAGTGCCAATCAAGGCGTGGAACAGATAAAGCTGTGTAGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639557.3
CDS TCA 72 bp GCTCCCTGTAAAGCCCCAATTCTCGTCTGCATCATCTaGAGAACACATCATATTCTCTCCACAACCCAGTCT +
Preference number: 6 (lower is better)
Translates to: APCKAPILVCII*RTHHILSTTQS
Trigger: AGACTGGGTTGTGGAGAGAATATGATGTGTTCTTCAGATGATGCAGACGAGAATTGGGGCTTTACAGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475638.6
ENST00000640273.1
CDS GCA 72 bp CTGAATAATGATGCTGAACGGAATCACATCCCCCAATaGAGGACTACTGGCTACATGTTCACTTGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: LNNDAERNHIPQ*RTTGYMFTCLE
Trigger: TTCCAGGCAAGTGAACATGTAGCCAGTAGTCCTGCATTGGGGGATGTGATTCCGTTCAGCATCATTATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639557.3
ENST00000639798.1
ENST00000640820.3
CDS TCA 72 bp AACTGGTGCAAATTCTTTGCCTTCTCTACTTCTCACTaGTTGAACATAAGCTTCCAGGGCTCCCCTGATGAG +
Preference number: 6 (lower is better)
Translates to: NWCKFFAFSTSH*LNISFQGSPDE
Trigger: CTCATCAGGGGAGCCCTGGAAGCTTATGTTCAATCAGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS CCA 72 bp TTCCCACCTTCACCAAGAGGTCTTATGAGACTGGCATaGCGGATAAAAAGTTCAACAGCTCTTTGGGCAATA +
Preference number: 6 (lower is better)
Translates to: FPPSPRGLMRLA*RIKSSTALWAI
Trigger: TATTGCCCAAAGAGCTGTTGAACTTTTTATCCGCCATGCCAGTCTCATAAGACCTCTTGGTGAAGGTGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639557.3
ENST00000639798.1
ENST00000640820.3
CDS CAA 90 bp CTGAGCAGCTTTTGTTATCTCTCTACTTCCCCCTTGCAGTTGTCCTaGGAGTCTCTTACTGAGATTCAAGATACGAATAATCCTCCGAAG +
Preference number: 6 (lower is better)
Translates to: LSSFCYLSTSPLQLS*ESLTEIQDTNNPPK
Trigger: CTTCGGAGGATTATTCGTATCTTGAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAGATAACAAAAGCTGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000475638.6
ENST00000605888.1
ENST00000639330.3
ENST00000639445.1
ENST00000639557.3
ENST00000640273.1
ENST00000640820.3
CDS TCA 72 bp GATTTCAGTTCAGCGGGTGCTCTCGTGAACAAAAACTaGATAATGATGCTGAACGGAATCACATCCCCCAAT +
Preference number: 6 (lower is better)
Translates to: DFSSAGALVNKN*IMMLNGITSPN
Trigger: ATTGGGGGATGTGATTCCGTTCAGCATCATTATTCAGTTTTTGTTCACGAGAGCACCCGCTGAACTGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639557.3
ENST00000639798.1
ENST00000640820.3
CDS CAA 72 bp GAGACTGGCATGGCGGATAAAAAGTTCAACAGCTCTTaGGGCAATAGCCTCAGTGTTGTCAAAGACAAAATC +
Preference number: 6 (lower is better)
Translates to: ETGMADKKFNSS*GNSLSVVKDKI
Trigger: GATTTTGTCTTTGACAACACTGAGGCTATTGCCCAAAGAGCTGTTGAACTTTTTATCCGCCATGCCAGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000464542.5
ENST00000639330.3
ENST00000639557.3
ENST00000639798.1
ENST00000640820.3
CDS CAA 90 bp GAGACTCTGAGCAGCTTTTGTTATCTCTCTACTTCCCCCTTGCAGTaGTCCTTGGAGTCTCTTACTGAGATTCAAGATACGAATAATCCT +
Preference number: 6 (lower is better)
Translates to: ETLSSFCYLSTSPLQ*SLESLTEIQDTNNP
Trigger: AGGATTATTCGTATCTTGAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAGATAACAAAAGCTGCTCAGAGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000475638.6
ENST00000605888.1
ENST00000639330.3
ENST00000639445.1
ENST00000639557.3
ENST00000640273.1
ENST00000640820.3
CDS CAA 72 bp TCATCTGAAGAACACCTTCCAACGACTCAATCCCAGTaGCTTGTGCCAGTAAATCTTCATGTCTTGCAACAA +
Preference number: 6 (lower is better)
Translates to: SSEEHLPTTQSQ*LVPVNLHVLQQ
Trigger: TTGTTGCAAGACATGAAGATTTACTGGCACAAGCAACTGGGATTGAGTCGTTGGAAGGTGTTCTTCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000605888.1
ENST00000639330.3
ENST00000639445.1
ENST00000639557.3
ENST00000640820.3
CDS TCA 72 bp GTGAGTAAGGGTTGCACAGCATTTTCCATAAGAGCATaGATAGCCAGTTCTATTCAACACTGTACTGCAGAT +
Preference number: 6 (lower is better)
Translates to: VSKGCTAFSIRA*IASSIQHCTAD
Trigger: ATCTGCAGTACAGTGTTGAATAGAACTGGCTATTCATGCTCTTATGGAAAATGCTGTGCAACCCTTACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000462342.1
ENST00000464542.5
ENST00000468350.5
ENST00000638286.1
ENST00000638872.1
ENST00000639798.1
CDS GCA 72 bp AAGAGCATGAATAGCCAGTTCTATTCAACACTGTACTaGAGATCCTGGACAGTGAAACAAGGCATGGAAAAA +
Preference number: 6 (lower is better)
Translates to: KSMNSQFYSTLY*RSWTVKQGMEK
Trigger: TTTTTCCATGCCTTGTTTCACTGTCCAGGATCTGCAGTACAGTGTTGAATAGAACTGGCTATTCATGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464542.5
ENST00000639798.1
CDS CCA 72 bp TTTGTTATCTCTCTACTTCCCCCTTGCAGTTGTCCTTaGAGTCTCTTACTGAGATTCAAGATACGAATAATC +
Preference number: 6 (lower is better)
Translates to: FVISLLPPCSCP*SLLLRFKIRII
Trigger: GATTATTCGTATCTTGAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAGATAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000475638.6
ENST00000605888.1
ENST00000639330.3
ENST00000639445.1
ENST00000639557.3
ENST00000640273.1
ENST00000640820.3
CDS CAA 72 bp ATAGAGGTCTGTAGTTCCACTTGCATTAAAATTCCCTaGGATATGCTGACTGTATTGTTGAAGACGCTTCCA +
Preference number: 6 (lower is better)
Translates to: IEVCSSTCIKIP*DMLTVLLKTLP
Trigger: TGGAAGCGTCTTCAACAATACAGTCAGCATATCCAAGGGAATTTTAATGCAAGTGGAACTACAGACCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7
ENST00000639330.3
ENST00000639557.3
ENST00000640820.3
CDS GCA 72 bp GCTGAACCATTATGGGATAAACTGGTGCAAATTCTTTaGCTTCTCTACTTCTCACTGATTGAACATAAGCTT +
Preference number: 6 (lower is better)
Translates to: AEPLWDKLVQIL*LLYFSLIEHKL
Trigger: AAGCTTATGTTCAATCAGTGAGAAGTAGAGAAGGCAAAGAATTTGCACCAGTTTATCCCATAATGGTTCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000639557.3
ENST00000640820.3
CDS CAA 72 bp TTTTGTTATCTCTCTACTTCCCCCTTGCAGTTGTCCTaGGAGTCTCTTACTGAGATTCAAGATACGAATAAT +
Preference number: 6 (lower is better)
Translates to: FCYLSTSPLQLS*ESLTEIQDTNN
Trigger: ATTATTCGTATCTTGAATCTCAGTAAGAGACTCCAAGGACAACTGCAAGGGGGAAGTAGAGAGATAACAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000297135.9
ENST00000347053.8
ENST00000393603.7