RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166685

Ensembl transcript IDs: ENST00000299886.9, ENST00000438720.7, ENST00000577238.1, ENST00000577844.1, ENST00000580271.5, ENST00000582512.5, ENST00000582587.2, ENST00000582672.1, ENST00000582973.1, ENST00000618996.4

Found 534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAAGTCCAAACCATGTTAGCCAGGATGGTCTCGATCTCCTGACGTaGTCCGTCCACCTTGGCCTCCCGAAGTGCCCCGCAGAAGCCTCT +
Preference number: 1 (lower is better)
Translates to: RSPNHVSQDGLDLLT*SVHLGLPKCPAEAS
Trigger: AGAGGCTTCTGCGGGGCACTTCGGGAGGCCAAGGTGGACGGATCACGTCAGGAGATCGAGACCATCCTGGCTAACATGGTTTGGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582973.1
3UTR GCA 90 bp CTTTCATGCAGAATAGTTGACCGGAAGTGGCTGGCGGCTGCCACCTaGCGGATGAGTATAGGAAACCGGGAGAGGACGGGACTGTATCGG +
Preference number: 1 (lower is better)
Translates to: LSCRIVDRKWLAAAT*RMSIGNRERTGLYR
Trigger: CCGATACAGTCCCGTCCTCTCCCGGTTTCCTATACTCATCCGGCAGGTGGCAGCCGCCAGCCACTTCCGGTCAACTATTCTGCATGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
3UTR GCA 90 bp ACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAGGACTTTaGTGTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGCCT +
Preference number: 1 (lower is better)
Translates to: TQAELRSTMALVRGL*CRSRFEEDTEQHEP
Trigger: AGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR GCA 90 bp TCTCCACAGCCTGCTAACCTAATGTGGGCAGAACTGAAAGATCACTaGAGTGGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATGCT +
Preference number: 1 (lower is better)
Translates to: SPQPANLMWAELKDH*SGNCSGRGCNIAHA
Trigger: AGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATTAGGTTAGCAGGCTGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR CCA 90 bp CCTAATGTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTaGAAGAGGCTGCAACATAGCCCATGCTTAGGGACTGGATGGTTT +
Preference number: 1 (lower is better)
Translates to: PNVGRTERSLQWKLF*KRLQHSPCLGTGWF
Trigger: AAACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR TCA 90 bp ACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAATaGGGACTGTCTTGGGAAAAGGGTAGACACAGGCACTTCTCTCCA +
Preference number: 1 (lower is better)
Translates to: TRNSMSLCDKTRIWK*GLSWEKGRHRHFSP
Trigger: TGGAGAGAAGTGCCTGTGTCTACCCTTTTCCCAAGACAGTCCTCATTTCCAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR-3UTR TCA 90 bp CTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCTGTCGGTCCAGATTTaGAGAGGACACGGAACAGCA +
Preference number: 2 (lower is better)
Translates to: LPTRPPRDATRSPHGTHKLSVQI*RGHGTA
Trigger: TGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAG...CTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR-3UTR GCA 90 bp CCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAACCCAGGAGGATTCCTaGAGGCTTAACAGTTGGCAT +
Preference number: 2 (lower is better)
Translates to: PSARRHSESTRHTQAELRTQEDS*RLNSWH
Trigger: ATGCCAACTGTTAAGCCTGCAGGAATCCTCCTGGGT...TCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR-3UTR CCA 90 bp ATAGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCTTGACCGGAAGTGGCTaGCGGCTGCCACCTGCCGGA +
Preference number: 2 (lower is better)
Translates to: IEHRASATAWSDTPWHLSLTGSG*RLPPAG
Trigger: TCCGGCAGGTGGCAGCCGCCAGCCACTTCCGGTCAA...GCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
3UTR-3UTR TCA 90 bp ATAGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCGTGGCGTGGAGACACTaGGAGGCTTCCATCGAGCTC +
Preference number: 2 (lower is better)
Translates to: IEHRASATAWSDTPWHLSVAWRH*EASIEL
Trigger: GAGCTCGATGGAAGCCTCTCAGTGTCTCCACGCCAC...GCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
3UTR-3UTR GCA 90 bp AGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCAAGAAGTGGCTGGCGGCTaGCACCTGCCGGATGAGTAT +
Preference number: 2 (lower is better)
Translates to: RAQGLGHSLVRHTLAFEQEVAGG*HLPDEY
Trigger: ATACTCATCCGGCAGGTGGCAGCCGCCAGCCACTTC...TTGCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
3UTR-3UTR TCA 90 bp TCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGGTTCGATGTTTCTGGTTaGTTTAGCCTTTCGAGTGCT +
Preference number: 2 (lower is better)
Translates to: SEQGARNCRVTSCGACRGFDVSG*FSLSSA
Trigger: AGCACTCGAAAGGCTAAATCAACCAGAAACATCGAA...CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582973.1
3UTR CAA 90 bp TCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCAACATCTaGCTTTCATGCAGAATAGTTGACCGGAAGTGGCTGGCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SATAWSDTPWHLSNI*LSCRIVDRKWLAAA
Trigger: GGCAGCCGCCAGCCACTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTTGCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
3UTR CAA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTaGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACT +
Preference number: 2 (lower is better)
Translates to: ILESQPSLNNEGADV*SSSLTSCLNKEPGT
Trigger: AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
3UTR-3UTR CCA 90 bp CCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGCAGGCTTAACAGTTaGCATCGTACTGAAATGAAA +
Preference number: 2 (lower is better)
Translates to: PDLKRTRNSMSLCDKTRICRLNS*HRTEMK
Trigger: TTTCATTTCAGTACGATGCCAACTGTTAAGCCTGCA...AATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR CCA 72 bp GGATGGTCTCGATCTCCTGACGTGATCCGTCCACCTTaGCCTCCCGAAGTGCCCCGCAGAAGCCTCTTGGCA +
Preference number: 3 (lower is better)
Translates to: GWSRSPDVIRPP*PPEVPRRSLLA
Trigger: TGCCAAGAGGCTTCTGCGGGGCACTTCGGGAGGCCAAGGTGGACGGATCACGTCAGGAGATCGAGACCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582973.1
3UTR TCA 72 bp AACCATGTTAGCCAGGATGGTCTCGATCTCCTGACGTaGTCCGTCCACCTTGGCCTCCCGAAGTGCCCCGCA +
Preference number: 3 (lower is better)
Translates to: NHVSQDGLDLLT*SVHLGLPKCPA
Trigger: TGCGGGGCACTTCGGGAGGCCAAGGTGGACGGATCACGTCAGGAGATCGAGACCATCCTGGCTAACATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582973.1
3UTR GCA 72 bp AGAATAGTTGACCGGAAGTGGCTGGCGGCTGCCACCTaGCGGATGAGTATAGGAAACCGGGAGAGGACGGGA +
Preference number: 3 (lower is better)
Translates to: RIVDRKWLAAAT*RMSIGNRERTG
Trigger: TCCCGTCCTCTCCCGGTTTCCTATACTCATCCGGCAGGTGGCAGCCGCCAGCCACTTCCGGTCAACTATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
3UTR CCA 72 bp GGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTaGAAGAGGCTGCAACATAGCCCATGCTTAGGGACT +
Preference number: 3 (lower is better)
Translates to: GRTERSLQWKLF*KRLQHSPCLGT
Trigger: AGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR CCA 72 bp CACAGGCACTTCTCTCCACAGCCTGCTAACCTAATGTaGGCAGAACTGAAAGATCACTGCAGTGGAAACTGT +
Preference number: 3 (lower is better)
Translates to: HRHFSPQPANLM*AELKDHCSGNC
Trigger: ACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCACATTAGGTTAGCAGGCTGTGGAGAGAAGTGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR GCA 72 bp TGGAAACTGTTCTGGAAGAGGCTGCAACATAGCCCATaGTTAGGGACTGGATGGTTTTTGCAAGAGCTTTTT +
Preference number: 3 (lower is better)
Translates to: WKLFWKRLQHSP*LGTGWFLQELF
Trigger: AAAAAGCTCTTGCAAAAACCATCCAGTCCCTAAGCATGGGCTATGTTGCAGCCTCTTCCAGAACAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438720.7
3UTR TCA 72 bp AGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAATaGGGACTGTCTTGGGAAAAGGGTAGACACAGGCAC +
Preference number: 3 (lower is better)
Translates to: SMSLCDKTRIWK*GLSWEKGRHRH
Trigger: GTGCCTGTGTCTACCCTTTTCCCAAGACAGTCCTCATTTCCAAATTCTAGTTTTGTCACAAAGGCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp AGCCCTCCTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACATGCACTGCTTCAGATaGGGGCACAGCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPPAHSPSARRHSESTRHMHCFR*GHSSPR
Trigger: CCTGGGAGAGCTGTGCCCCCATCTGAAGCAGTGCAT...GTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGGCAGGAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp AGCCCTCCTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACAGCAAATCTGAGCCTTaGTACCAGCACCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: SPPAHSPSARRHSESTRHSKSEP*YQHHGV
Trigger: CACACCATGGTGCTGGTATCAAGGCTCAGATTTGCT...GTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGGCAGGAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp CTGGCGGCTGCCACCTGCCGGATGAGTATAGGAAACCGGGAGAGGACGGGACTGTTCTCCTGGGATGGCTaGTGTGGCTGCAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LAAATCRMSIGNRERTGLFSWDG*CGCRGR
Trigger: CCTTCCCCTGCAGCCACAGCAGCCATCCCAGGAGAA...CAGTCCCGTCCTCTCCCGGTTTCCTATACTCATCCGGCAGGTGGCAGCCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp AGCAGAGCAGGTAGAGCTGTGTGGCGTGGAGACACTGAGAGGCTTCCATCGAGCATCTCGGCCCGAACCTaGCGCTCCAGCCCGCGGATC +
Preference number: 4 (lower is better)
Translates to: SRAGRAVWRGDTERLPSSISART*RSSPRI
Trigger: GATCCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGAT...GCTCGATGGAAGCCTCTCAGTGTCTCCACGCCACACAGCTCTACCTGCTCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp CTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGAAGGGTTCGGAGTGTTaGCTGGAACTCGACGATGGA +
Preference number: 4 (lower is better)
Translates to: LPTRPPRDATRSPHGTHKKGSEC*LELDDG
Trigger: TCCATCGTCGAGTTCCAGCCAACACTCCGAACCCTT...CTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp CTGGCGGCTGCCACCTGCCGGATGAGTATAGGAAACCGGGAGAGGACGGGACTGAGCTCCTCCTTCTTGTaGTCGATCTCGGCCCGAACC +
Preference number: 4 (lower is better)
Translates to: LAAATCRMSIGNRERTGLSSSFL*SISART
Trigger: GGTTCGGGCCGAGATCGAGCACAAGAAGGAGGAGCT...CAGTCCCGTCCTCTCCCGGTTTCCTATACTCATCCGGCAGGTGGCAGCCGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp AACCGGGAGAGGACGGGACTGTATCGGGAACTAGAAGAATCCAGCTGGAGCAGGAGGCGGGCGCAGTACTaGTCGGTGGCCTTCACGGCG +
Preference number: 4 (lower is better)
Translates to: NRERTGLYRELEESSWSRRRAQY*SVAFTA
Trigger: CGCCGTGAAGGCCACCGACCAGTACTGCGCCCGCCT...CCTGCTCCAGCTGGATTCTTCTAGTTCCCGATACAGTCCCGTCCTCTCCCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp TCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGGTGCAGCGCCCGGTTCTaGGTGACTGGAAATGCACCT +
Preference number: 4 (lower is better)
Translates to: SEQGARNCRVTSCGACRGCSARF*VTGNAP
Trigger: AGGTGCATTTCCAGTCACCCAGAACCGGGCGCTGCA...CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp CCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACATCCCAGCTGTaGTTGGTGGACTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: PSARRHSESTRHTQAELRSTSQL*LVDSLV
Trigger: TACCAATGAGTCCACCAATCACAGCTGGGATGTGCT...TCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCATGCATGCCACGGACTaGGTCCGCAGCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERAMHATD*VRSISC
Trigger: GCAGGAGATGCTGCGGACTCAGTCCGTGGCATGCAT...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp TCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGGAGTCCAAACCTGATCTaGCTGGATGCCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SEQGARNCRVTSCGACRGSPNLI*LDASGR
Trigger: CCTGCCACTGGCATCCAGTCAGATCAGGTTTGGACT...CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR GCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCCCTGCAGGACACCAGTaGCCTTTCCGGCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERAPAGHQ*PFRQDA
Trigger: AGCATCCTGCCGGAAAGGGCACTGGTGTCCTGCAGG...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCGTGAGGTTGCCGCGGTaGCCATGGTGCACTCGTCAG +
Preference number: 4 (lower is better)
Translates to: KLSEQGARNCRVTSCGACVRLPR*PWCTRQ
Trigger: CTGACGAGTGCACCATGGCCACCGCGGCAACCTCAC...GCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR CCA 90 bp ACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGGCGCATCTGGCCGATaGTGTCGGCCGCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: TSCLNKEPGTVGSPAVERGASGR*CRPPRS
Trigger: TGATCGAGGCGGCCGACACCATCGGCCAGATGCGCC...ACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCCGCAGTACTGGTCGGTaGCCTTCACGGCGTCCACTA +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERARSTGR*PSRRPL
Trigger: TAGTGGACGCCGTGAAGGCCACCGACCAGTACTGCG...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGCTCATCCCAGCTGGTaGCTGTGGCCAGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERAAHPSW*LWPELS
Trigger: GCTCAGTTCTGGCCACAGCCACCAGCTGGGATGAGC...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp CCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAAAGTTCCTGCAAAGCTaGAACCAAGAGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSARRHSESTRHTQAELRKFLQS*NQELLG
Trigger: TCCAAGGAGCTCTTGGTTTCAGCTTTGCAGGAACTT...TCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCCGCTGCACCAGGCGATaGAGGTTGCTGTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERARCTRR*RLLLRC
Trigger: ACACCTCAACAGCAACCTTCATCGCCTGGTGCAGCG...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR GCA 90 bp TTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCAGATGGCTGCTGTGGCTaGTGGGCCCGCGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSSSLTSCLNKEPGTVGSDGCCG*WARGGR
Trigger: CCGGCCACCGCGGGCCCAGCAGCCACAGCAGCCATC...TGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCCCTTTCCGGCAGGATaGTGGCCTGTGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KLSEQGARNCRVTSCGACPFPAG*WPVMVS
Trigger: GGAGACCATCACAGGCCAGCATCCTGCCGGAAAGGG...GCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp TCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGGCTGATTTTCCCAGGATaGACTGCTTCAGATGGGGGC +
Preference number: 4 (lower is better)
Translates to: SEQGARNCRVTSCGACRGLIFPG*TASDGG
Trigger: GCCCCCATCTGAAGCAGTGCATCCTGGGAAAATCAG...CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGTCGCCAGGTTGGCTaGGAAACTGTGGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERAGRQVG*ETVAEV
Trigger: GACTTCAGCCACAGTTTCGCAGCCAACCTGGCGACC...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR CCA 90 bp TTGAGCAACATCTTGCTTTCATGCAGAATAGTTGACCGGAAGTGGCTGGCGGCTGCGCAGCGGCGCATCTaGCCGATGGTGTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSNILLSCRIVDRKWLAAAQRRI*PMVSAA
Trigger: GGCGGCCGACACCATCGGCCAGATGCGCCGCTGCGC...AGCCGCCAGCCACTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTTGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCCTGGGATGGCTGCTGTaGCTGCTGGGCCCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVLGWLL*LLGPRW
Trigger: CCACCGCGGGCCCAGCAGCCACAGCAGCCATCCCAG...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCAACATCTTGTTGACCGGAAGTGGCTaGCGGCTGCCACCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: RASATAWSDTPWHLSNILLTGSG*RLPPAG
Trigger: TCCGGCAGGTGGCAGCCGCCAGCCACTTCCGGTCAA...CAAGATGTTGCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp TCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGGGTTGCTGTTGAGGTGTaGCGTGAAAACGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SEQGARNCRVTSCGACRGVAVEV*RENVQV
Trigger: GACCTGGACGTTTTCACGCCACACCTCAACAGCAAC...CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp TCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGGCTGACTGGATGCCAGTaGCAGGATGTTATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SEQGARNCRVTSCGACRGLTGCQ*QDVMGF
Trigger: GAACCCCATAACATCCTGCCACTGGCATCCAGTCAG...CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR TCA 90 bp CCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAACTAATGAGCAAATCTaGGCCTTGATACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PSARRHSESTRHTQAELRTNEQI*ALIPAP
Trigger: TGGTGCTGGTATCAAGGCTCAGATTTGCTCATTAGT...TCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGCCCGGTTTGCCACGCTaGCCCAGGCCGCATCGGAAG +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGPGLPR*PRPHRK
Trigger: CTTCCGATGCGGCCTGGGTCAGCGTGGCAAACCGGG...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCACCCGGTTTGCCACGCTaGCCCAGGCCGCATCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPPGLPR*PRPHRK
Trigger: CTTCCGATGCGGCCTGGGTCAGCGTGGCAAACCGGG...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCGAGCCGGCTGGGAAGTaGGGTCGCCAGAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTEPAGK*GRQRGE
Trigger: CTCACCTCTCTGGCGACCTCACTTCCCAGCCGGCTC...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR GCA 90 bp CTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGAAGTTTCTGAATAGTTaGCTTTCTGGCCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LPTRPPRDATRSPHGTHKKFLNS*LSGQQE
Trigger: TTCCTGCTGGCCAGAAAGGCAACTATTCAGAAACTT...CTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGATGTGCTTGATGCATaGCACGGACTGAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERADVLDA*HGLSPQ
Trigger: CTGCGGACTCAGTCCGTGGCATGCATCAAGCACATC...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGCATCCTGTTGCCCTTaGACACCCTCTTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: LSEQGARNCRVTSCGACRASCCP*TPSSML
Trigger: GAGCATTGAAGAGGGTGTGCAAGGGCAACAGGATGC...CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCATCTCGGCCCGAACCTaGCGCTCCAGCCCGCGGATC +
Preference number: 4 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVISART*RSSPRI
Trigger: GATCCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGAT...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GAGGACGGGACTGTATCGGGAACTAGAAGAATCCAGCTGGAGCAGGCTGTGGAGCGCAGTACTGGTCGGTaGCCTTCACGGCGTCCACTA +
Preference number: 4 (lower is better)
Translates to: EDGTVSGTRRIQLEQAVERSTGR*PSRRPL
Trigger: TAGTGGACGCCGTGAAGGCCACCGACCAGTACTGCG...CTCCACAGCCTGCTCCAGCTGGATTCTTCTAGTTCCCGATACAGTCCCGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGCAGTACTGGTCGGTaGCCTTCACGGCGTCCACTA +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVERSTGR*PSRRPL
Trigger: TAGTGGACGCCGTGAAGGCCACCGACCAGTACTGCG...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACTGGGATGGCTGCTGTaGCTGCTGGGCCCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LSSSLTSCLNKEPGTVGSLGWLL*LLGPRW
Trigger: CCACCGCGGGCCCAGCAGCCACAGCAGCCATCCCAG...TGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTTGACCGGAAGTGGCTaGCGGCTGCCACCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSLTGSG*RLPPAG
Trigger: TCCGGCAGGTGGCAGCCGCCAGCCACTTCCGGTCAA...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp ATAGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCATAGTTGACCGGAAGTaGCTGGCGGCTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: IEHRASATAWSDTPWHLSIVDRK*LAAATC
Trigger: GCAGGTGGCAGCCGCCAGCCACTTCCGGTCAACTAT...GCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCCTCCGCCATCTTCGTTaGGGGCGGAAGCGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSLRHLR*GRKRFR
Trigger: GCGGAAGCGCTTCCGCCCCCAACGAAGATGGCGGAG...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR TCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTCCGCTACTGGCAAACTaGCCCCGGTTTGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCPLLAN*PRFATL
Trigger: CAGCGTGGCAAACCGGGGTCAGTTTGCCAGTAGCGG...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAGCCTTAGAGTTGGCCTaGGCCCTCCTGCCCACTCGC +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGALELA*ALLPTR
Trigger: GCGAGTGGGCAGGAGGGCTCAGGCCAACTCTAAGGC...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCTTGGCAGCCTTTACCTaGTCTGACTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERALAAFT*SDWMPV
Trigger: CACTGGCATCCAGTCAGATCAGGTAAAGGCTGCCAA...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582973.1
CDS-3UTR TCA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCAGGTCGCCAGAGAGGTaGGGTCGCCAGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVRSPER*GRQVGC
Trigger: GCAGCCAACCTGGCGACCTCACCTCTCTGGCGACCT...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR GCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGATTCTCCTGGGATGGCTaGTGTGGCTGCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGFSWDG*CGCWAR
Trigger: GCGGGCCCAGCAGCCACAGCAGCCATCCCAGGAGAA...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp ATAGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCCTGGCGGCTGCCACCTaGCGGATGAGTATAGGAAAC +
Preference number: 4 (lower is better)
Translates to: IEHRASATAWSDTPWHLSLAAAT*RMSIGN
Trigger: GTTTCCTATACTCATCCGGCAGGTGGCAGCCGCCAG...GCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR GCA 90 bp TCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGGGAACTCGACGATGGATaGTGGCAGGTGTTTAAACCA +
Preference number: 4 (lower is better)
Translates to: SEQGARNCRVTSCGACRGELDDG*WQVFKP
Trigger: TGGTTTAAACACCTGCCAGCATCCATCGTCGAGTTC...CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCCTGACTGATGGGATGTaGAAGGGTTCGGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERALTDGM*KGSECW
Trigger: CCAACACTCCGAACCCTTGCACATCCCATCAGTCAG...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGCACGGTCCCCGCATCTaGGTATCTGTCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: DKLSEQGARNCRVTSCGAHGPRI*VSVKGR
Trigger: TCTGCCTTTGACAGATACGCAGATGCGGGGACCGTG...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCCGCAGCATCTCCTaGACGGTCCCCGCATCTGCG +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRVRSIS*TVPASA
Trigger: CGCAGATGCGGGGACCGTGCAGGAGATGCTGCGGAC...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCTTTCCCAGGATGCACTaGTTCAGATGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: KLSEQGARNCRVTSCGACFPRMH*FRWGHS
Trigger: GCTGTGCCCCCATCTGAAGCAGTGCATCCTGGGAAA...GCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTTCTGGAGTCTGGCTTaGTCCGGCCACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: DKLSEQGARNCRVTSCGAFWSLA*SGHSSP
Trigger: AGGTGAAGAGTGGCCGGAGCAAGCCAGACTCCAGAA...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGGCGCAGCGGCGCATCTaGCCGATGGTGTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLAQRRI*PMVSAA
Trigger: GGCGGCCGACACCATCGGCCAGATGCGCCGCTGCGC...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGTTGACCGGAAGTGGCTaGCGGCTGCCACCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRLTGSG*RLPPAG
Trigger: TCCGGCAGGTGGCAGCCGCCAGCCACTTCCGGTCAA...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCAAGCCTCGGCCACAGCTTaGTCAGACACACCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RAQGLGHSLVRHTLAFEQASATA*SDTPWH
Trigger: ATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGC...TTGCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGTGGAGAGGCCGCTACTaGCAAACTGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVEWRGRY*QTDPGL
Trigger: CAAACCGGGGTCAGTTTGCCAGTAGCGGCCTCTCCA...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGTGCAGCGCCCGGTTCTaGGTGACTGGAAATGCACCT +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVECSARF*VTGNAP
Trigger: AGGTGCATTTCCAGTCACCCAGAACCGGGCGCTGCA...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CTGCCCACTCGCCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGTGCAGGCTTAACAGTTaGCATCGTACTGAAATGAAA +
Preference number: 4 (lower is better)
Translates to: LPTRPPRDATRSPHGTHKCRLNS*HRTEMK
Trigger: TTTCATTTCAGTACGATGCCAACTGTTAAGCCTGCA...CTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGGCGAGTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGCCGCTTCAGCGCGGGTaGGGTTGCCGCGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLPLQRG*GCRGGH
Trigger: ATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGG...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR TCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGACCGCTACTGGCAAACTaGCCCCGGTTTGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGPLLAN*PRFATL
Trigger: CAGCGTGGCAAACCGGGGTCAGTTTGCCAGTAGCGG...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp AAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCGGCAGAGTCTGGCCATaGAAAGAACTGAGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLSEQGARNCRVTSCGACGRVWP*KELSAA
Trigger: AGCTGCACTCAGTTCTTTTCATGGCCAGACTCTGCC...GCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGCCCGGTTCTGGGTaGCTGGAAATGCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGAPGSG*LEMHLL
Trigger: AAGAAGGTGCATTTCCAGTCACCCAGAACCGGGCGC...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCAAATCTCCTCCGCTCCATaGGTCTCGAAAAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: RAQGLGHSLVRHTLAFEQISSAP*VSKRAA
Trigger: TGCGGCTCTTTTCGAGACGCATGGAGCGGAGGAGAT...TTGCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR GCA 90 bp AAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCTGACTGATGGGATGTaGAAGGGTTCGGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KLSEQGARNCRVTSCGACLTDGM*KGSECW
Trigger: CCAACACTCCGAACCCTTGCACATCCCATCAGTCAG...GCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAAAACTGACCCCGGTTTaGCACGCTGACCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGKLTPV*HADPGR
Trigger: GCGGCCTGGGTCAGCGTGGCAAACCGGGGTCAGTTT...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGCTTTCACAACTGCACTaGTCCAGACCTGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: DKLSEQGARNCRVTSCGALSQLH*SRPGSP
Trigger: TGGGCTACCAGGTCTGGAGCAGTGCAGTTGTGAAAG...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACCGCGGTGGCCATGGTaGACTCGTCAGCCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LESQPSLNNEGADVLSSSPRWPW*TRQPPA
Trigger: CGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGG...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR CCA 90 bp TCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGCCACATGGCAGGGCTaGATCTGGCAGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSLTSCLNKEPGTVGSPAATWQG*IWQQSF
Trigger: GAAGGACTGCTGCCAGATCCAGCCCTGCCATGTGGC...AGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCCCCAGCTGGTGGCTGTaGCCAGAACTGAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTPSWWL*PELSQH
Trigger: ATGCTGGCTCAGTTCTGGCCACAGCCACCAGCTGGG...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCGCTCATCCCAGCTGGTaGCTGTGGCCAGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTAHPSW*LWPELS
Trigger: GCTCAGTTCTGGCCACAGCCACCAGCTGGGATGAGC...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCTCACTTTCTCAATTCTaGAGTCTGGCTTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERASLSQF*SLACSG
Trigger: GCCGGAGCAAGCCAGACTCCAGAATTGAGAAAGTGA...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp TTGTCATGCTCAGTGGGAGAAGTCCAAACCATGTTAGCCAGGATGGTCTCGATCGTGATCCGTCCACCTTaGCCTCCCGAAGTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LSCSVGEVQTMLARMVSIVIRPP*PPEVPR
Trigger: GCGGGGCACTTCGGGAGGCCAAGGTGGACGGATCAC...GATCGAGACCATCCTGGCTAACATGGTTTGGACTTCTCCCACTGAGCATGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582973.1
CDS-3UTR CCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGATTAAACGGAGCCGGCTaGGAAGTGAGGTCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGLNGAG*EVRSPE
Trigger: CTCTGGCGACCTCACTTCCCAGCCGGCTCCGTTTAA...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR TCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGCCAGCAGGAAGTCTGTaGGGGCTTGGCGAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGPAGSL*GLGEEN
Trigger: GTTCTCCTCGCCAAGCCCTCACAGACTTCCTGCTGG...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAAGTCCACGATGTGCTTaGTGCATGCCACGGACTGAG +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGSPRCA*CMPRTE
Trigger: CTCAGTCCGTGGCATGCATCAAGCACATCGTGGACT...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCAGAGCCAGCCAAGTTTaGATAATGAAGGTGCAGACG +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERARASQV*IMKVQT
Trigger: CGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCT...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR GCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTCTGGCGGCTGCCACCTaGCGGATGAGTATAGGAAAC +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCLAAAT*RMSIGN
Trigger: GTTTCCTATACTCATCCGGCAGGTGGCAGCCGCCAG...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGACCTGCAGGACACCAGTaGCCTTTCCGGCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGPAGHQ*PFRQDA
Trigger: AGCATCCTGCCGGAAAGGGCACTGGTGTCCTGCAGG...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAAGGGCTGATGGCTTGTaGTTTCATGGAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGRADGL*FHGEAA
Trigger: AGCGGCCTCTCCATGAAAGCACAAGCCATCAGCCCT...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCACACCCTCTTCAATaGTCTGTAGCTCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGAHPLQ*SVALPG
Trigger: TCCGGGCAGAGCTACAGAGCATTGAAGAGGGTGTGC...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGCCTGATCTGACTGGATaGCAGTGGCAGGATGTTATG +
Preference number: 4 (lower is better)
Translates to: DKLSEQGARNCRVTSCGAPDLTG*QWQDVM
Trigger: CATAACATCCTGCCACTGGCATCCAGTCAGATCAGG...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR GCA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGACCCAGGAGGATTCCTaGAGGCTTAACAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: DKLSEQGARNCRVTSCGATQEDS*RLNSWH
Trigger: ATGCCAACTGTTAAGCCTGCAGGAATCCTCCTGGGT...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR GCA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACATGGCCTGAGCCCTCCTaGCCACTCGCCCTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: GFDGREYGKDTLLILCLTWPEPS*PLALRA
Trigger: CGCGCGGAGGGCGAGTGGGCAGGAGGGCTCAGGCCA...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACGCGCAGCGGCGCATCTaGCCGATGGTGTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNAQRRI*PMVSAA
Trigger: GGCGGCCGACACCATCGGCCAGATGCGCCGCTGCGC...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AGCAGAGCAGGTAGAGCTGTGTGGCGTGGAGACACTGAGAGGCTTCCATCGAGCAAGTCTGTGAGGGCTTaGCGAGGAGAACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRAGRAVWRGDTERLPSSKSVRA*RGELSS
Trigger: AGAAGAGAGTTCTCCTCGCCAAGCCCTCACAGACTT...GCTCGATGGAAGCCTCTCAGTGTCTCCACGCCACACAGCTCTACCTGCTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGCCCAGCTGGTGGCTGTaGCCAGAACTGAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGPSWWL*PELSQH
Trigger: ATGCTGGCTCAGTTCTGGCCACAGCCACCAGCTGGG...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp ACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTCTCAATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: TSCLNKEPGTVGSPAVERLNSGV*LAPATL
Trigger: AAGAGTGGCCGGAGCAAGCCAGACTCCAGAATTGAG...ACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCTCAATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVELNSGV*LAPATL
Trigger: AAGAGTGGCCGGAGCAAGCCAGACTCCAGAATTGAG...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTCACTTTCTCAATTCTaGAGTCTGGCTTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: DKLSEQGARNCRVTSCGASLSQF*SLACSG
Trigger: GCCGGAGCAAGCCAGACTCCAGAATTGAGAAAGTGA...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp AGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCAGTGGCAGGATGTTATaGGGTTCTTGGGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SCLNKEPGTVGSPAVERASGRML*GSWELN
Trigger: GTTCAACTCCCAAGAACCCCATAACATCCTGCCACT...GGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp ACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTCTGACTGGATGCCAGTaGCAGGATGTTATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TSCLNKEPGTVGSPAVERLTGCQ*QDVMGF
Trigger: GAACCCCATAACATCCTGCCACTGGCATCCAGTCAG...ACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR TCA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTGGCGTGGAGACACTaGGAGGCTTCCATCGAGCTC +
Preference number: 4 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTVAWRH*EASIEL
Trigger: GAGCTCGATGGAAGCCTCTCAGTGTCTCCACGCCAC...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGGTGGATGTGCTTATTTaGAGGGGAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVEVDVLI*RGVAGA
Trigger: AGCACCAGCAACTCCCCTTCAAATAAGCACATCCAC...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGAGAGCCAGCCAAGTTTaGATAATGAAGGTGCAGACG +
Preference number: 4 (lower is better)
Translates to: DKLSEQGARNCRVTSCGARASQV*IMKVQT
Trigger: CGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCT...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR GCA 90 bp TGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAACGAAGTGGCTGGCGGCTaGCACCTGCCGGATGAGTAT +
Preference number: 4 (lower is better)
Translates to: WAELKDHCSGNCSGRGCNEVAGG*HLPDEY
Trigger: ATACTCATCCGGCAGGTGGCAGCCGCCAGCCACTTC...GTTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp TTGAGCAACATCTTGCTTTCATGCAGAATAGTTGACCGGAAGTGGCTGGCGGCTGAAGTGGCTGGCGGCTaGCACCTGCCGGATGAGTAT +
Preference number: 4 (lower is better)
Translates to: LSNILLSCRIVDRKWLAAEVAGG*HLPDEY
Trigger: ATACTCATCCGGCAGGTGGCAGCCGCCAGCCACTTC...AGCCGCCAGCCACTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTTGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR GCA 90 bp CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGATGTGGATCCATTTCTaGAGCGTGTCTTTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LSEQGARNCRVTSCGACRMWIHF*SVSFRY
Trigger: ATACCTGAAAGACACGCTGCAGAAATGGATCCACAT...CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTTTCTGGAGTCTGGCTTaGTCCGGCCACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCFWSLA*SGHSSP
Trigger: AGGTGAAGAGTGGCCGGAGCAAGCCAGACTCCAGAA...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR GCA 90 bp ACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTACCCAGGAGGATTCCTaGAGGCTTAACAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: TSCLNKEPGTVGSPAVERTQEDS*RLNSWH
Trigger: ATGCCAACTGTTAAGCCTGCAGGAATCCTCCTGGGT...ACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCAAGGCGGGCGCAGTACTaGTCGGTGGCCTTCACGGCG +
Preference number: 4 (lower is better)
Translates to: LESQPSLNNEGADVLSSSRRAQY*SVAFTA
Trigger: CGCCGTGAAGGCCACCGACCAGTACTGCGCCCGCCT...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTATAGTTGACCGGAAGTaGCTGGCGGCTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTIVDRK*LAAATC
Trigger: GCAGGTGGCAGCCGCCAGCCACTTCCGGTCAACTAT...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGACCAGCACCATGGTGTaGCTGGTTGAGAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVETSTMV*LVEKFL
Trigger: CAGAAACTTCTCAACCAGCCACACCATGGTGCTGGT...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCAAACCAAGAGCTCCTTaGAGCTACTGGAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: KLSEQGARNCRVTSCGACKPRAP*SYWRWS
Trigger: ACTCCATCTCCAGTAGCTCCAAGGAGCTCTTGGTTT...GCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCAGCTCTCCCAGGGACTaGCAGAGTCTGGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSSSPRD*QSLAMK
Trigger: TTTCATGGCCAGACTCTGCCAGTCCCTGGGAGAGCT...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCAACGTCCAGGTCAAATaGATCAATGAGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KLSEQGARNCRVTSCGACNVQVK*INEGFQ
Trigger: CTGGAAGCCCTCATTGATCCATTTGACCTGGACGTT...GCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp TCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTCCCGCAGAAGCCTCTTaGCAGCCTTTACCTGATCTG +
Preference number: 4 (lower is better)
Translates to: SSLTSCLNKEPGTVGSPAPAEAS*QPLPDL
Trigger: CAGATCAGGTAAAGGCTGCCAAGAGGCTTCTGCGGG...AGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582973.1
CDS-3UTR TCA 90 bp ATAGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGAGCTTTCTAAGAGTAGCTTaGTCTGGGCAGCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: IEHRASATAWSDTPWHLSFLRVA*SGQPCC
Trigger: ACAGCATGGCTGCCCAGATCAAGCTACTCTTAGAAA...GCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR TCA 90 bp CATTTGAGCAACATCTTGCTTTCATGCAGAATAGTTGACCGGAAGTGGCTGGCGCCAGCAGGAAGTCTGTaGGGGCTTGGCGAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: HLSNILLSCRIVDRKWLAPAGSL*GLGEEN
Trigger: GTTCTCCTCGCCAAGCCCTCACAGACTTCCTGCTGG...CGCCAGCCACTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTTGCTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR TCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGGCCATGAAAAGAACTaGGTGCAGCTTGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGGHEKN*VQLGTV
Trigger: AACAGTGCCAAGCTGCACTCAGTTCTTTTCATGGCC...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCGGCAGAGTCTGGCCATaGAAAGAACTGAGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTGRVWP*KELSAA
Trigger: AGCTGCACTCAGTTCTTTTCATGGCCAGACTCTGCC...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGTCGGATCTTGGATGTaGCACTGCTGCCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPVGSWM*HCCQTL
Trigger: CAGAGTCTGGCAGCAGTGTCACATCCAAGATCCGAC...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp TCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGGTCAAATGGATCAATaGGGGCTTCCAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSLTSCLNKEPGTVGSPAGQMDQ*GLPGGQ
Trigger: CTGACCACCTGGAAGCCCTCATTGATCCATTTGACC...AGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGAGTCCAAACCTGATCTaGCTGGATGCCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGSPNLI*LDASGR
Trigger: CCTGCCACTGGCATCCAGTCAGATCAGGTTTGGACT...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGACTGCGAAACTGTGGCTaGAGTCTTCCCTTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGLRNCG*SLPFPL
Trigger: TAAGGGAAAGGGAAGACTTCAGCCACAGTTTCGCAG...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR GCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGATCTCCTCCGCTCCATaGGTCTCGAAAAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGISSAP*VSKRAA
Trigger: TGCGGCTCTTTTCGAGACGCATGGAGCGGAGGAGAT...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTCCCTTTCCGGCAGGATaGTGGCCTGTGATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VGPDLKRTRNSMSLCDKTPFPAG*WPVMVS
Trigger: GGAGACCATCACAGGCCAGCATCCTGCCGGAAAGGG...AGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGAGGGCTGATGGCTTGTaGTTTCATGGAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGRADGL*FHGEAA
Trigger: AGCGGCCTCTCCATGAAAGCACAAGCCATCAGCCCT...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCATGCAGTCCACGATGTaGTTGATGCATGCCACGGAC +
Preference number: 4 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTMQSTM*LMHATD
Trigger: GTCCGTGGCATGCATCAAGCACATCGTGGACTGCAT...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCCTGATTTTCCCAGGATaGACTGCTTCAGATGGGGGC +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSLIFPG*TASDGG
Trigger: GCCCCCATCTGAAGCAGTGCATCCTGGGAAAATCAG...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGTTGATACCAGCACCATaGTGTGGCTGGTTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVELIPAP*CGWLRS
Trigger: ACTTCTCAACCAGCCACACCATGGTGCTGGTATCAA...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTTTCCGGCAGGATGCTaGCCTGTGATGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGFPAGC*PVMVSR
Trigger: TCTGGAGACCATCACAGGCCAGCATCCTGCCGGAAA...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCTCCTTGGAGCTACTaGAGATGGAGTCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGAPWSY*RWSQSL
Trigger: AAGGCTTTGACTCCATCTCCAGTAGCTCCAAGGAGC...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGGGAGCTGATCATGGGTaGCTCGGTGGGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLGADHG*LGGRWG
Trigger: TCCCCACCTCCCACCGAGCCACCCATGATCAGCTCC...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCAGCACATCCCAGCTGTaGTTGGTGGACTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSSTSQL*LVDSLV
Trigger: TACCAATGAGTCCACCAATCACAGCTGGGATGTGCT...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAAAGTTCCTGCAAAGCTaGAACCAAGAGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGKFLQS*NQELLG
Trigger: TCCAAGGAGCTCTTGGTTTCAGCTTTGCAGGAACTT...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGATGCATGCCACGGACTaGGTCCGCAGCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLMHATD*VRSISC
Trigger: GCAGGAGATGCTGCGGACTCAGTCCGTGGCATGCAT...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp AAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCGTAGGAATGATTTCCTaGGTTTTCACCTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KLSEQGARNCRVTSCGACVGMIS*VFTFPC
Trigger: ACAGGGAAAGGTGAAAACTCAGGAAATCATTCCTAC...GCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGGTCAAATGGATCAATaGGGGCTTCCAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPGQMDQ*GLPGGQ
Trigger: CTGACCACCTGGAAGCCCTCATTGATCCATTTGACC...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGGAGAAGTCCAAACCTaGTCTGACTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPGEVQT*SDWMPV
Trigger: CACTGGCATCCAGTCAGATCAGGTTTGGACTTCTCC...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCCTGTCGGTCCAGATTTaGAGAGGACACGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVLSVQI*RGHGTA
Trigger: TGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAG...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGTTCTCCTGGGATGGCTaGTGTGGCTGCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKFSWDG*CGCWAR
Trigger: GCGGGCCCAGCAGCCACAGCAGCCATCCCAGGAGAA...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTGTCCGCAGCATCTCCTaGACGGTCCCCGCATCTGCG +
Preference number: 4 (lower is better)
Translates to: ILESQPSLNNEGADVLSSVRSIS*TVPASA
Trigger: CGCAGATGCGGGGACCGTGCAGGAGATGCTGCGGAC...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGATGAAAAGAACTGAGTaGAGCTTGGCACTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVEMKRTE*SLALLR
Trigger: CCTCAACAGTGCCAAGCTGCACTCAGTTCTTTTCAT...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAATACCAGGACGGCTGTaGAGGGAGTCGGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPIPGRL*RESDLG
Trigger: TCCAAGATCCGACTCCCTGCACAGCCGTCCTGGTAT...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTCCTGATCTGACTGGATaGCAGTGGCAGGATGTTATG +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCPDLTG*QWQDVM
Trigger: CATAACATCCTGCCACTGGCATCCAGTCAGATCAGG...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR GCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGATTCGAGTGCTTGTCATaGTCAGTGGGAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGFECLS*SVGEVQ
Trigger: TTGGACTTCTCCCACTGAGCATGACAAGCACTCGAA...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp TTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAAAGGCGGGCGCAGTACTaGTCGGTGGCCTTCACGGCG +
Preference number: 4 (lower is better)
Translates to: LKRTRNSMSLCDKTRIWKRRAQY*SVAFTA
Trigger: CGCCGTGAAGGCCACCGACCAGTACTGCGCCCGCCT...TTTCCAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTTTTCCGGCAGGATGCTaGCCTGTGATGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTFPAGC*PVMVSR
Trigger: TCTGGAGACCATCACAGGCCAGCATCCTGCCGGAAA...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTTCGGAGTGTTGGCTaGAACTCGACGATGGATGCT +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRVRSVG*NSTMDA
Trigger: AGCATCCATCGTCGAGTTCCAGCCAACACTCCGAAC...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCGCTCCTTGGAGCTACTaGAGATGGAGTCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSAPWSY*RWSQSL
Trigger: AAGGCTTTGACTCCATCTCCAGTAGCTCCAAGGAGC...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGATGGCTTGTGCTTTCATaGAGAGGCCGCTACTGGCAA +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGWLVLS*RGRYWQ
Trigger: TTGCCAGTAGCGGCCTCTCCATGAAAGCACAAGCCA...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGAACTCTTGGCCTGTGTaGGAGAAACGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGNSWPV*EKRPWA
Trigger: TGCCCAAGGACGTTTCTCCCACACAGGCCAAGAGTT...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTCCCATCACGCTCTGCTaGAGGAGTACTTCTTTAACC +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCPITLC*RSTSLT
Trigger: GGTTAAAGAAGTACTCCTCCAGCAGAGCGTGATGGG...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCCTCAATTCTGGAGTCTaGCTTGCTCCGGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVLNSGV*LAPATL
Trigger: AAGAGTGGCCGGAGCAAGCCAGACTCCAGAATTGAG...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGATGAGGGCTTCCAGGTaGTCAGTCACTTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVEMRASR*SVTFSI
Trigger: AATTGAGAAAGTGACTGACCACCTGGAAGCCCTCAT...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAGTTGCTGTTGAGGTGTaGCGTGAAAACGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGVAVEV*RENVQV
Trigger: GACCTGGACGTTTTCACGCCACACCTCAACAGCAAC...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTTTTCTAAGAGTAGCTTaGTCTGGGCAGCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCFLRVA*SGQPCC
Trigger: ACAGCATGGCTGCCCAGATCAAGCTACTCTTAGAAA...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGAGCAAATCTGAGCCTTaGTACCAGCACCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRSKSEP*YQHHGV
Trigger: CACACCATGGTGCTGGTATCAAGGCTCAGATTTGCT...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GTCAGAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGGGCCATGAAAAGAACTaGGTGCAGCTTGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: VRGLCCRSRFEEDTEQHEGHEKN*VQLGTV
Trigger: AACAGTGCCAAGCTGCACTCAGTTCTTTTCATGGCC...CTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGGCGCCCGGTTCTGGGTaGCTGGAAATGCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLAPGSG*LEMHLL
Trigger: AAGAAGGTGCATTTCCAGTCACCCAGAACCGGGCGC...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGGTCAAATGGATCAATaGGGGCTTCCAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTGQMDQ*GLPGGQ
Trigger: CTGACCACCTGGAAGCCCTCATTGATCCATTTGACC...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAGAAGTCCAAACCTaGTCTGACTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPGEVQT*SDWMPV
Trigger: CACTGGCATCCAGTCAGATCAGGTTTGGACTTCTCC...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp ACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTTTCGATGTTTCTGGTTaGTTTAGCCTTTCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: TSCLNKEPGTVGSPAVERFDVSG*FSLSSA
Trigger: AGCACTCGAAAGGCTAAATCAACCAGAAACATCGAA...ACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR GCA 90 bp GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGAACATCTTGCTTTCATaGAGAATAGTTGACCGGAAG +
Preference number: 4 (lower is better)
Translates to: GVHTAHTSGAEKHDGSSQNILLS*RIVDRK
Trigger: CTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTT...CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp GCAGAGCAGGTAGAGCTGTGTGGCGTGGAGACACTGAGAGGCTTCCATCGAGCTAACATCTTGCTTTCATaGAGAATAGTTGACCGGAAG +
Preference number: 4 (lower is better)
Translates to: AEQVELCGVETLRGFHRANILLS*RIVDRK
Trigger: CTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTT...AGCTCGATGGAAGCCTCTCAGTGTCTCCACGCCACACAGCTCTACCTGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR GCA 90 bp GTCAGAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGACCCAGGAGGATTCCTaGAGGCTTAACAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VRGLCCRSRFEEDTEQHETQEDS*RLNSWH
Trigger: ATGCCAACTGTTAAGCCTGCAGGAATCCTCCTGGGT...CTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp AAAACCTTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTATCTCGGCCCGAACCTaGCGCTCCAGCCCGCGGATC +
Preference number: 4 (lower is better)
Translates to: KTLYFSIAPPLKAALVHFISART*RSSPRI
Trigger: GATCCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGAT...AAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAAGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAACCAGCACCATGGTGTaGCTGGTTGAGAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPTSTMV*LVEKFL
Trigger: CAGAAACTTCTCAACCAGCCACACCATGGTGCTGGT...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCAGAGCTTGCTTCAGAGTaGTGGCCAGCAACTCCACTA +
Preference number: 4 (lower is better)
Translates to: LSSSLTSCLNKEPGTVGSELASE*WPATPL
Trigger: TAGTGGAGTTGCTGGCCACCACTCTGAAGCAAGCTC...TGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGCTCGACGATGGATGCTaGCAGGTGTTTAAACCAGCT +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGLDDGC*QVFKPA
Trigger: AGCTGGTTTAAACACCTGCCAGCATCCATCGTCGAG...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAAAGGGTTCGGAGTGTTaGCTGGAACTCGACGATGGA +
Preference number: 4 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPKGSEC*LELDDG
Trigger: TCCATCGTCGAGTTCCAGCCAACACTCCGAACCCTT...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGCCCATCACGCTCTGCTaGAGGAGTACTTCTTTAACC +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRPITLC*RSTSLT
Trigger: GGTTAAAGAAGTACTCCTCCAGCAGAGCGTGATGGG...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAATGTTATGGGGTTCTTaGGAGTTGAACGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGMLWGS*ELNVLL
Trigger: GAGCAGTACGTTCAACTCCCAAGAACCCCATAACAT...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp TTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACTGACTGGATGCCAGTaGCAGGATGTTATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSSSLTSCLNKEPGTVGSLTGCQ*QDVMGF
Trigger: GAACCCCATAACATCCTGCCACTGGCATCCAGTCAG...TGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCGCTTGTCATGCTCAGTaGGAGAAGTCCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSACHAQ*EKSKPD
Trigger: ATCAGGTTTGGACTTCTCCCACTGAGCATGACAAGC...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTTGGCTGCGAAACTGTaGCTGAAGTCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGLAAKL*LKSSLS
Trigger: GGAAAGGGAAGACTTCAGCCACAGTTTCGCAGCCAA...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR TCA 90 bp TGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAACTCAGGTATTCCTGACTaGTGGGATGTGCAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: WAELKDHCSGNCSGRGCNSGIPD*WDVQGF
Trigger: GAACCCTTGCACATCCCATCAGTCAGGAATACCTGA...GTTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp TGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTCAGGTATTCCTGACTaGTGGGATGTGCAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: CRRVVFFTDKLSEQGARNSGIPD*WDVQGF
Trigger: GAACCCTTGCACATCCCATCAGTCAGGAATACCTGA...GTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGTCTTTCAGGTATTCCTaGCTGATGGGATGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRSFRYS*LMGCAR
Trigger: CCTTGCACATCCCATCAGTCAGGAATACCTGAAAGA...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGATCTTTCAGGTATTCCTaGCTGATGGGATGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGSFRYS*LMGCAR
Trigger: CCTTGCACATCCCATCAGTCAGGAATACCTGAAAGA...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCTGTCAGAACAATGTTaGGGTAACGCAGATCATAAA +
Preference number: 4 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVELSEQC*GNADHK
Trigger: TTTATGATCTGCGTTACCTCAACATTGTTCTGACAG...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GTTTCGATGTTTCTGGTTGATTTAGCCTTTCGAGTGCTTGTCATGCTCAGTGGGAGCCTTTACCTGATCTaGCTGGATGCCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSMFLVDLAFRVLVMLSGSLYLI*LDASGR
Trigger: CCTGCCACTGGCATCCAGTCAGATCAGGTAAAGGCT...CCCACTGAGCATGACAAGCACTCGAAAGGCTAAATCAACCAGAAACATCGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582973.1
CDS-3UTR GCA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTGAAGTGGCTGGCGGCTaGCACCTGCCGGATGAGTAT +
Preference number: 4 (lower is better)
Translates to: ILESQPSLNNEGADVLSSEVAGG*HLPDEY
Trigger: ATACTCATCCGGCAGGTGGCAGCCGCCAGCCACTTC...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCAGTTTCATCTCTTCCTaGAGGACACCAGTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVSFISS*RTPVPF
Trigger: AAAGGGCACTGGTGTCCTGCAGGAAGAGATGAAACT...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGGAACTCGACGATGGATaGTGGCAGGTGTTTAAACCA +
Preference number: 4 (lower is better)
Translates to: RCRRVVFFTDKLSEQGARELDDG*WQVFKP
Trigger: TGGTTTAAACACCTGCCAGCATCCATCGTCGAGTTC...CCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp TGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACCCTGATCTGACTGGATaGCAGTGGCAGGATGTTATG +
Preference number: 4 (lower is better)
Translates to: CRRVVFFTDKLSEQGARNPDLTG*QWQDVM
Trigger: CATAACATCCTGCCACTGGCATCCAGTCAGATCAGG...GTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp ATTATAGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGTGGTCAGACACACCTTaGCATTTGAGCAACATCTTG +
Preference number: 4 (lower is better)
Translates to: IIEHRASATAWSDTPWHLWSDTP*HLSNIL
Trigger: CAAGATGTTGCTCAAATGCCAAGGTGTGTCTGACCA...CAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCTATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTTGGTCAGACACACCTTaGCATTTGAGCAACATCTTG +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCWSDTP*HLSNIL
Trigger: CAAGATGTTGCTCAAATGCCAAGGTGTGTCTGACCA...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAAAGTCTGTGAGGGCTTaGCGAGGAGAACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPKSVRA*RGELSS
Trigger: AGAAGAGAGTTCTCCTCGCCAAGCCCTCACAGACTT...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGTTGATACCAGCACCATaGTGTGGCTGGTTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRLIPAP*CGWLRS
Trigger: ACTTCTCAACCAGCCACACCATGGTGCTGGTATCAA...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTGAGCTTGCTTCAGAGTaGTGGCCAGCAACTCCACTA +
Preference number: 4 (lower is better)
Translates to: VGPDLKRTRNSMSLCDKTELASE*WPATPL
Trigger: TAGTGGAGTTGCTGGCCACCACTCTGAAGCAAGCTC...AGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCAGAAGAGCAAGCCACATaGCAGGGCTGGATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LESQPSLNNEGADVLSSSEEQAT*QGWIWQ
Trigger: CTGCCAGATCCAGCCCTGCCATGTGGCTTGCTCTTC...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAACTCGACGATGGATGCTaGCAGGTGTTTAAACCAGCT +
Preference number: 4 (lower is better)
Translates to: VGRTERSLQWKLFWKRLQLDDGC*QVFKPA
Trigger: AGCTGGTTTAAACACCTGCCAGCATCCATCGTCGAG...TTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTTGGAGCTACTGGAGATaGAGTCAAAGCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCWSYWR*SQSLLL
Trigger: CAAAAGAAGGCTTTGACTCCATCTCCAGTAGCTCCA...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCATTGAAGGGGAGTTGCTaGTGCTGCTTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPLKGSC*CCFQVP
Trigger: AGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAA...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAGCTCTCCCAGGGACTaGCAGAGTCTGGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLSSPRD*QSLAMK
Trigger: TTTCATGGCCAGACTCTGCCAGTCCCTGGGAGAGCT...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTCACTTTCTCAATTCTaGAGTCTGGCTTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: CRRVVFFTDKLSEQGARNSLSQF*SLACSG
Trigger: GCCGGAGCAAGCCAGACTCCAGAATTGAGAAAGTGA...GTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACGTCCAGGTCAAATaGATCAATGAGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RCRRVVFFTDKLSEQGARNVQVK*INEGFQ
Trigger: CTGGAAGCCCTCATTGATCCATTTGACCTGGACGTT...CCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGCCCATGCTTAGGGACTaGATGGTTTTTGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRPMLRD*MVFARA
Trigger: AGCTCTTGCAAAAACCATCCAGTCCCTAAGCATGGG...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAATTTCTAAGAGTAGCTTaGTCTGGGCAGCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: VGRTERSLQWKLFWKRLQFLRVA*SGQPCC
Trigger: ACAGCATGGCTGCCCAGATCAAGCTACTCTTAGAAA...TTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTGTGGATGTGCTTATTTaGAGGGGAGTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VGPDLKRTRNSMSLCDKTVDVLI*RGVAGA
Trigger: AGCACCAGCAACTCCCCTTCAAATAAGCACATCCAC...AGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACCGCTGCACCAGGCGATaGAGGTTGCTGTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNRCTRR*RLLLRC
Trigger: ACACCTCAACAGCAACCTTCATCGCCTGGTGCAGCG...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGCTCTTGGCACCAACCTaGGCTTTTGTTTCGATGTTT +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRLLAPT*AFVSMF
Trigger: AAACATCGAAACAAAAGCTCAGGTTGGTGCCAAGAG...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp ACATTTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCAGCTCCTCCTTCTTGTaGTCGATCTCGGCCCGAACC +
Preference number: 4 (lower is better)
Translates to: TFLLRGYLVVSAGIFYTFSSSFL*SISART
Trigger: GGTTCGGGCCGAGATCGAGCACAAGAAGGAGGAGCT...GAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGCTGGCGGCTGCCACCTaGCGGATGAGTATAGGAAAC +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKLAAAT*RMSIGN
Trigger: GTTTCCTATACTCATCCGGCAGGTGGCAGCCGCCAG...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AAAACCTTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTAAACTGACCCCGGTTTaGCACGCTGACCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: KTLYFSIAPPLKAALVHFKLTPV*HADPGR
Trigger: GCGGCCTGGGTCAGCGTGGCAAACCGGGGTCAGTTT...AAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAATGAAAAGAACTGAGTaGAGCTTGGCACTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPMKRTE*SLALLR
Trigger: CCTCAACAGTGCCAAGCTGCACTCAGTTCTTTTCAT...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCCTGGGTGACTGGAAATaGACCTTCTTTCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTLGDWK*TFFLNL
Trigger: CAGATTAAGAAAGAAGGTGCATTTCCAGTCACCCAG...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGCTTGTACTTCTCTATTaGGCCGCCATTAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRLVLLY*AAIKSS
Trigger: GCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAAG...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGACTAGTCAGAGGACTTTaGTGTCGGTCCAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGLVRGL*CRSRFE
Trigger: TTCAAATCTGGACCGACAGCAAAGTCCTCTGACTAG...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGCCTCGGCCACAGCTTaGTCAGACACACCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKASATA*SDTPWH
Trigger: ATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGC...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAGCCACATGGCAGGGCTaGATCTGGCAGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NGFDGREYGKDTLLILCLATWQG*IWQQSF
Trigger: GAAGGACTGCTGCCAGATCCAGCCCTGCCATGTGGC...TAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp ACATTTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTGGAGAGGCCGCTACTaGCAAACTGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: TFLLRGYLVVSAGIFYTFWRGRY*QTDPGL
Trigger: CAAACCGGGGTCAGTTTGCCAGTAGCGGCCTCTCCA...GAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAACTCTTGGCCTGTGTaGGAGAAACGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLNSWPV*EKRPWA
Trigger: TGCCCAAGGACGTTTCTCCCACACAGGCCAAGAGTT...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGATGCACTGCTTCAGATaGGGGCACAGCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKMHCFR*GHSSPR
Trigger: CCTGGGAGAGCTGTGCCCCCATCTGAAGCAGTGCAT...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTCAGAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGATGAGGGCTTCCAGGTaGTCAGTCACTTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: VRGLCCRSRFEEDTEQHEMRASR*SVTFSI
Trigger: AATTGAGAAAGTGACTGACCACCTGGAAGCCCTCAT...CTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCATGAGGGCTTCCAGGTaGTCAGTCACTTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVMRASR*SVTFSI
Trigger: AATTGAGAAAGTGACTGACCACCTGGAAGCCCTCAT...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CCA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAAGTGGCAGGATGTTATaGGGTTCTTGGGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPSGRML*GSWELN
Trigger: GTTCAACTCCCAAGAACCCCATAACATCCTGCCACT...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp TTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCAAGTGGCAGGATGTTATaGGGTTCTTGGGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LSSSLTSCLNKEPGTVGSSGRML*GSWELN
Trigger: GTTCAACTCCCAAGAACCCCATAACATCCTGCCACT...TGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp GTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAAGCTTGTCATGCTCAGTaGGAGAAGTCCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: VGRTERSLQWKLFWKRLQACHAQ*EKSKPD
Trigger: ATCAGGTTTGGACTTCTCCCACTGAGCATGACAAGC...TTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAAATGATAGTGCCGGGTTaGCAGTTAACTCTTTCACCC +
Preference number: 4 (lower is better)
Translates to: VGRTERSLQWKLFWKRLQMIVPG*QLTLSP
Trigger: GGGTGAAAGAGTTAACTGCCAACCCGGCACTATCAT...TTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCATGCAGGCTTAACAGTTaGCATCGTACTGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPCRLNS*HRTELL
Trigger: CAAAAGCTCAGTACGATGCCAACTGTTAAGCCTGCA...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582512.5
ENST00000618996.4
3UTR CAA 72 bp GCTTGGTCAGACACACCTTGGCATTTGAGCAACATCTaGCTTTCATGCAGAATAGTTGACCGGAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AWSDTPWHLSNI*LSCRIVDRKWL
Trigger: CAGCCACTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTTGCTCAAATGCCAAGGTGTGTCTGACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR TCA 90 bp TGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACACTAATGAGCAAATCTaGGCCTTGATACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: CRRVVFFTDKLSEQGARNTNEQI*ALIPAP
Trigger: TGGTGCTGGTATCAAGGCTCAGATTTGCTCATTAGT...GTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTAGGAATGATTTCCTaGGTTTTCACCTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRVGMIS*VFTFPC
Trigger: ACAGGGAAAGGTGAAAACTCAGGAAATCATTCCTAC...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGACTGGGTGAATCCATaGATCAAAACTTTCACAACT +
Preference number: 4 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCDWVNP*IKTFTT
Trigger: AGTTGTGAAAGTTTTGATTCATGGATTCACCCAGTC...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACGTCGGATCTTGGATGTaGCACTGCTGCCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNVGSWM*HCCQTL
Trigger: CAGAGTCTGGCAGCAGTGTCACATCCAAGATCCGAC...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp AATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTACGCTGCACCAGGCGATaGAGGTTGCTGTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: NGFDGREYGKDTLLILCLRCTRR*RLLLRC
Trigger: ACACCTCAACAGCAACCTTCATCGCCTGGTGCAGCG...TAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR GCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGATCTCCTCCGCTCCATaGGTCTCGAAAAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKISSAP*VSKRAA
Trigger: TGCGGCTCTTTTCGAGACGCATGGAGCGGAGGAGAT...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCATGTGGATCCATTTCTaGAGCGTGTCTTTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVMWIHF*SVSFRY
Trigger: ATACCTGAAAGACACGCTGCAGAAATGGATCCACAT...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCATCAAGGAACAGTTGCTaGATCATATCTTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPSRNSC*IISSQN
Trigger: GTTCTGGGAAGATATGATGCAGCAACTGTTCCTTGA...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGTCAAGGAACAGTTGCTaGATCATATCTTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRSRNSC*IISSQN
Trigger: GTTCTGGGAAGATATGATGCAGCAACTGTTCCTTGA...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGTATTTGAAGGGGAGTTaGTGGTGCTGCTTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRYLKGS*WCCFQV
Trigger: AACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATA...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTATTTGAAGGGGAGTTaGTGGTGCTGCTTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGYLKGS*WCCFQV
Trigger: AACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATA...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTACTCAAAGTGGATGTaGTTATTTGAAGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSYSKWM*LFEGEL
Trigger: CAACTCCCCTTCAAATAAGCACATCCACTTTGAGTA...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTGATGTGCTTGATGCATaGCACGGACTGAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ILESQPSLNNEGADVLSSDVLDA*HGLSPQ
Trigger: CTGCGGACTCAGTCCGTGGCATGCATCAAGCACATC...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGCACACCCTCTTCAATaGTCTGTAGCTCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKAHPLQ*SVALPG
Trigger: TCCGGGCAGAGCTACAGAGCATTGAAGAGGGTGTGC...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTATACCAGGACGGCTGTaGAGGGAGTCGGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: PDLKRTRNSMSLCDKTRIIPGRL*RESDLG
Trigger: TCCAAGATCCGACTCCCTGCACAGCCGTCCTGGTAT...AATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGCTGGGTGACTGGAAATaGACCTTCTTTCTTAATCTG +
Preference number: 4 (lower is better)
Translates to: RCRRVVFFTDKLSEQGARLGDWK*TFFLNL
Trigger: CAGATTAAGAAAGAAGGTGCATTTCCAGTCACCCAG...CCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGGAACTGAAAGATCACTaGAGTGGAAACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RCRRVVFFTDKLSEQGARELKDH*SGNCSG
Trigger: TCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTC...CCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGTCATTATAGTTGACCGGAAGTaGCTGGCGGCTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LYFSIAPPLKAALVHFVIIVDRK*LAAATC
Trigger: GCAGGTGGCAGCCGCCAGCCACTTCCGGTCAACTAT...AATGACAAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGTCTTCATTACACATGTaGATCCATTTCTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RCRRVVFFTDKLSEQGARSSLHM*IHFCSV
Trigger: CACGCTGCAGAAATGGATCCACATGTGTAATGAAGA...CCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAAACCAAGAGCTCCTTaGAGCTACTGGAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: VGPDLKRTRNSMSLCDKTKPRAP*SYWRWS
Trigger: ACTCCATCTCCAGTAGCTCCAAGGAGCTCTTGGTTT...AGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAACATGTTATGGGGTTCTTaGGAGTTGAACGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: WAELKDHCSGNCSGRGCNMLWGS*ELNVLL
Trigger: GAGCAGTACGTTCAACTCCCAAGAACCCCATAACAT...GTTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTATGTTATGGGGTTCTTaGGAGTTGAACGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTMLWGS*ELNVLL
Trigger: GAGCAGTACGTTCAACTCCCAAGAACCCCATAACAT...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGCTTAGGGACTGGATaGTTTTTGCAAGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSCLGTG*FLQELF
Trigger: AAAAAGCTCTTGCAAAAACCATCCAGTCCCTAAGCA...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCGAAGTAATGACTGGGTaGATCCATGAATCAAAACTT +
Preference number: 4 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTEVMTG*IHESKL
Trigger: AAGTTTTGATTCATGGATTCACCCAGTCATTACTTC...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGCTGTCAGAACAATGTTaGGGTAACGCAGATCATAAA +
Preference number: 4 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRLSEQC*GNADHK
Trigger: TTTATGATCTGCGTTACCTCAACATTGTTCTGACAG...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp TTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGTCATTCGCTGCACCAGGCGATaGAGGTTGCTGTTGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LYFSIAPPLKAALVHFVIRCTRR*RLLLRC
Trigger: ACACCTCAACAGCAACCTTCATCGCCTGGTGCAGCG...AATGACAAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAGGAGAAGTCCAAACCTaGTCTGACTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GFDGREYGKDTLLILCLTGEVQT*SDWMPV
Trigger: CACTGGCATCCAGTCAGATCAGGTTTGGACTTCTCC...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR TCA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCATTCGATGTTTCTGGTTaGTTTAGCCTTTCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPFDVSG*FSLSSA
Trigger: AGCACTCGAAAGGCTAAATCAACCAGAAACATCGAA...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR TCA 90 bp GGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAATAAAGCAAGGACCCATCCACGGATaGGCCTCTTGCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GREYGKDTLLILCLTIKQGPIHG*ASCSWH
Trigger: GTGCCAAGAGCAAGAGGCTCATCCGTGGATGGGTCC...TTGCTTTATTGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp ACATTTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCGCATCCTGTTGCCCTTaGACACCCTCTTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: TFLLRGYLVVSAGIFYTFASCCP*TPSSML
Trigger: GAGCATTGAAGAGGGTGTGCAAGGGCAACAGGATGC...GAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp TTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAATTTCCCAGGATGCACTaGTTCAGATGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LKRTRNSMSLCDKTRIWKFPRMH*FRWGHS
Trigger: GCTGTGCCCCCATCTGAAGCAGTGCATCCTGGGAAA...TTTCCAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTCTTTCACAACTGCACTaGTCCAGACCTGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: ILESQPSLNNEGADVLSSLSQLH*SRPGSP
Trigger: TGGGCTACCAGGTCTGGAGCAGTGCAGTTGTGAAAG...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGTTCGAGTGCTTGTCATaGTCAGTGGGAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLFECLS*SVGEVQ
Trigger: TTGGACTTCTCCCACTGAGCATGACAAGCACTCGAA...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp AAAACCTTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGCCTCGGCCACAGCTTaGTCAGACACACCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KTLYFSIAPPLKAALVHFASATA*SDTPWH
Trigger: ATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGC...AAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp AAAACCTTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGAAGAGCAAGCCACATaGCAGGGCTGGATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTLYFSIAPPLKAALVHFEEQAT*QGWIWQ
Trigger: CTGCCAGATCCAGCCCTGCCATGTGGCTTGCTCTTC...AAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCATCTTCATTACACATGTaGATCCATTTCTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPSSLHM*IHFCSV
Trigger: CACGCTGCAGAAATGGATCCACATGTGTAATGAAGA...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCATGGGAGAAACGTCCTTaGGCAGTGATGAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LESQPSLNNEGADVLSSSWEKRP*AVMSHQ
Trigger: CTGATGACTCATCACTGCCCAAGGACGTTTCTCCCA...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAACGTCCAGGTCAAATaGATCAATGAGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLNVQVK*INEGFQ
Trigger: CTGGAAGCCCTCATTGATCCATTTGACCTGGACGTT...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTGTTGCTGTTGAGGTGTaGCGTGAAAACGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ILESQPSLNNEGADVLSSVAVEV*RENVQV
Trigger: GACCTGGACGTTTTCACGCCACACCTCAACAGCAAC...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGGCTTGTCATGCTCAGTaGGAGAAGTCCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLACHAQ*EKSKPD
Trigger: ATCAGGTTTGGACTTCTCCCACTGAGCATGACAAGC...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp GTCAGAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGGAAGTAATGACTGGGTaGATCCATGAATCAAAACTT +
Preference number: 4 (lower is better)
Translates to: VRGLCCRSRFEEDTEQHEEVMTG*IHESKL
Trigger: AAGTTTTGATTCATGGATTCACCCAGTCATTACTTC...CTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp AATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAGGTCAAATGGATCAATaGGGGCTTCCAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: NGFDGREYGKDTLLILCLGQMDQ*GLPGGQ
Trigger: CTGACCACCTGGAAGCCCTCATTGATCCATTTGACC...TAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR TCA 90 bp TCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAACAGGAGAAGTCCAAACCTaGTCTGACTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SVTSHPTKREDKTIITRTGEVQT*SDWMPV
Trigger: CACTGGCATCCAGTCAGATCAGGTTTGGACTTCTCC...TGTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp CTGGTTGATTTAGCCTTTCGAGTGCTTGTCATGCTCAGTGGGAGAAGTCCAAACTTCGATGTTTCTGGTTaGTTTAGCCTTTCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVDLAFRVLVMLSGRSPNFDVSG*FSLSSA
Trigger: AGCACTCGAAAGGCTAAATCAACCAGAAACATCGAA...GTTTGGACTTCTCCCACTGAGCATGACAAGCACTCGAAAGGCTAAATCAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582973.1
CDS-3UTR GCA 90 bp CATTTGAGCAACATCTTGCTTTCATGCAGAATAGTTGACCGGAAGTGGCTGGCGAAGTTTCTGAATAGTTaGCTTTCTGGCCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HLSNILLSCRIVDRKWLAKFLNS*LSGQQE
Trigger: TTCCTGCTGGCCAGAAAGGCAACTATTCAGAAACTT...CGCCAGCCACTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTTGCTCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR GCA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTTACTCAAAGTGGATGTaGTTATTTGAAGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTYSKWM*LFEGEL
Trigger: CAACTCCCCTTCAAATAAGCACATCCACTTTGAGTA...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp TTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGTCATTCACGGTCCCCGCATCTaGGTATCTGTCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LYFSIAPPLKAALVHFVIHGPRI*VSVKGR
Trigger: TCTGCCTTTGACAGATACGCAGATGCGGGGACCGTG...AATGACAAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp AAAACCTTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTTTCTGGAGTCTGGCTTaGTCCGGCCACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: KTLYFSIAPPLKAALVHFFWSLA*SGHSSP
Trigger: AGGTGAAGAGTGGCCGGAGCAAGCCAGACTCCAGAA...AAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAAGGTTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAACCCAGGAGGATTCCTaGAGGCTTAACAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GFDGREYGKDTLLILCLTTQEDS*RLNSWH
Trigger: ATGCCAACTGTTAAGCCTGCAGGAATCCTCCTGGGT...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR CCA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAAAGTCTGTGAGGGCTTaGCGAGGAGAACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GFDGREYGKDTLLILCLTKSVRA*RGELSS
Trigger: AGAAGAGAGTTCTCCTCGCCAAGCCCTCACAGACTT...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTCTTGCTTCAGAGTGGTaGCCAGCAACTCCACTAATG +
Preference number: 4 (lower is better)
Translates to: ILESQPSLNNEGADVLSSLASEW*PATPLM
Trigger: CATTAGTGGAGTTGCTGGCCACCACTCTGAAGCAAG...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAACAGTTCGGAGTGTTGGCTaGAACTCGACGATGGATGCT +
Preference number: 4 (lower is better)
Translates to: SVTSHPTKREDKTIITRTVRSVG*NSTMDA
Trigger: AGCATCCATCGTCGAGTTCCAGCCAACACTCCGAAC...TGTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGTGGAGCTACTGGAGATaGAGTCAAAGCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLWSYWR*SQSLLL
Trigger: CAAAAGAAGGCTTTGACTCCATCTCCAGTAGCTCCA...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAATGGCTTGTGCTTTCATaGAGAGGCCGCTACTGGCAA +
Preference number: 4 (lower is better)
Translates to: LKRTRNSMSLCDKTRIWKWLVLS*RGRYWQ
Trigger: TTGCCAGTAGCGGCCTCTCCATGAAAGCACAAGCCA...TTTCCAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGACCCGATTAATTTCCTaGCATAAACTAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: RCRRVVFFTDKLSEQGARTRLIS*HKLNRK
Trigger: CTTCCTGTTTAGTTTATGCCAGGAAATTAATCGGGT...CCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAACCCGATTAATTTCCTaGCATAAACTAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPTRLIS*HKLNRK
Trigger: CTTCCTGTTTAGTTTATGCCAGGAAATTAATCGGGT...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACCGGTTCTGGGTGACTaGAAATGCACCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LESQPSLNNEGADVLSSSPVLGD*KCTFFL
Trigger: AAGAAAGAAGGTGCATTTCCAGTCACCCAGAACCGG...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp CAAACAACTCGATGCTGTAAGAAGACAAGCTGTTTGAGCTTTCAAACACACATGCTGACTGGATGCCAGTaGCAGGATGTTATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: QTTRCCKKTSCLSFQTHMLTGCQ*QDVMGF
Trigger: GAACCCCATAACATCCTGCCACTGGCATCCAGTCAG...CATGTGTGTTTGAAAGCTCAAACAGCTTGTCTTCTTACAGCATCGAGTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
3UTR CAA 72 bp AGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTaGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: SQPSLNNEGADV*SSSLTSCLNKE
Trigger: CTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR TCA 90 bp GGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAATAAAGCAAAGTCCACGATGTGCTTaGTGCATGCCACGGACTGAG +
Preference number: 4 (lower is better)
Translates to: GREYGKDTLLILCLTIKQSPRCA*CMPRTE
Trigger: CTCAGTCCGTGGCATGCATCAAGCACATCGTGGACT...TTGCTTTATTGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAATAAAGCAAAGTCCAAACCTGATCTaGCTGGATGCCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GREYGKDTLLILCLTIKQSPNLI*LDASGR
Trigger: CCTGCCACTGGCATCCAGTCAGATCAGGTTTGGACT...TTGCTTTATTGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR TCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGTTCGATGTTTCTGGTTaGTTTAGCCTTTCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLFDVSG*FSLSSA
Trigger: AGCACTCGAAAGGCTAAATCAACCAGAAACATCGAA...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR GCA 90 bp CCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTAGTTTCATCTCTTCCTaGAGGACACCAGTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PDLKRTRNSMSLCDKTRISFISS*RTPVPF
Trigger: AAAGGGCACTGGTGTCCTGCAGGAAGAGATGAAACT...AATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp AATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTACCTGATCTGACTGGATaGCAGTGGCAGGATGTTATG +
Preference number: 4 (lower is better)
Translates to: NGFDGREYGKDTLLILCLPDLTG*QWQDVM
Trigger: CATAACATCCTGCCACTGGCATCCAGTCAGATCAGG...TAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR GCA 90 bp AGGATTTTAGATCTTAATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCCTGATCTGACTGGATaGCAGTGGCAGGATGTTATG +
Preference number: 4 (lower is better)
Translates to: RILDLNGFDGREYGKDTLPDLTG*QWQDVM
Trigger: CATAACATCCTGCCACTGGCATCCAGTCAGATCAGG...CAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATTAAGATCTAAAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR GCA 90 bp ACATTTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCTTCGAGTGCTTGTCATaGTCAGTGGGAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TFLLRGYLVVSAGIFYTFFECLS*SVGEVQ
Trigger: TTGGACTTCTCCCACTGAGCATGACAAGCACTCGAA...GAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGTTCGAGTGCTTGTCATaGTCAGTGGGAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKFECLS*SVGEVQ
Trigger: TTGGACTTCTCCCACTGAGCATGACAAGCACTCGAA...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp CCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTTGAAGGGGAGTTGCTaGTGCTGCTTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PDLKRTRNSMSLCDKTRILKGSC*CCFQVP
Trigger: AGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAA...AATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACACCTTTGGCAAGGCATaGCCTCCAACCCGATTAATT +
Preference number: 4 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNTFGKA*PPTRLI
Trigger: AATTAATCGGGTTGGAGGCCATGCCTTGCCAAAGGT...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGACCTTTGGCAAGGCATaGCCTCCAACCCGATTAATT +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKTFGKA*PPTRLI
Trigger: AATTAATCGGGTTGGAGGCCATGCCTTGCCAAAGGT...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CCA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAGCTTGTCATGCTCAGTaGGAGAAGTCCAAACCTGAT +
Preference number: 4 (lower is better)
Translates to: GFDGREYGKDTLLILCLTACHAQ*EKSKPD
Trigger: ATCAGGTTTGGACTTCTCCCACTGAGCATGACAAGC...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR CCA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACGCTTGTCATGCTCAGTaGGAGAAGTCCAAACCATGT +
Preference number: 4 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNACHAQ*EKSKPC
Trigger: ACATGGTTTGGACTTCTCCCACTGAGCATGACAAGC...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582973.1
CDS-3UTR TCA 90 bp TCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAACAAGAGCCAGCCAAGTTTaGATAATGAAGGTGCAGACG +
Preference number: 4 (lower is better)
Translates to: SVTSHPTKREDKTIITRTRASQV*IMKVQT
Trigger: CGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCT...TGTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp TTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGTCATTTATTTAAAAGGGAGCTaGTCATGGGTGGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LYFSIAPPLKAALVHFVIYLKGS*SWVARW
Trigger: CCACCGAGCCACCCATGATCAGCTCCCTTTTAAATA...AATGACAAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp TCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAACAGGACACGGAACAGCATaGGCCTTTGTGACAAAACTA +
Preference number: 4 (lower is better)
Translates to: SVTSHPTKREDKTIITRTGHGTA*AFVTKL
Trigger: TAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCC...TGTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGAACATCTTGCTTTCATaGAGAATAGTTGACCGGAAG +
Preference number: 4 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLNILLS*RIVDRK
Trigger: CTTCCGGTCAACTATTCTGCATGAAAGCAAGATGTT...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAACTTCTTTAACCTCTTaGCACTTGGCCTGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GFDGREYGKDTLLILCLTTSLTS*HLACVG
Trigger: TCCTACACAGGCCAAGTGGCAAGAGGTTAAAGAAGT...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR GCA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTACTTCTTTAACCTCTTaGCACTTGGCCTGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: ILESQPSLNNEGADVLSSTSLTS*HLACVG
Trigger: TCCTACACAGGCCAAGTGGCAAGAGGTTAAAGAAGT...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp CAAACAACTCGATGCTGTAAGAAGACAAGCTGTTTGAGCTTTCAAACACACATGTTCGAGTGCTTGTCATaGTCAGTGGGAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QTTRCCKKTSCLSFQTHMFECLS*SVGEVQ
Trigger: TTGGACTTCTCCCACTGAGCATGACAAGCACTCGAA...CATGTGTGTTTGAAAGCTCAAACAGCTTGTCTTCTTACAGCATCGAGTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR GCA 90 bp TTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAACTGCAACATAGCCCATaGTTAGGGACTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: LKRTRNSMSLCDKTRIWKLQHSP*LGTGWF
Trigger: AAACCATCCAGTCCCTAAGCATGGGCTATGTTGCAG...TTTCCAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp AAAACCTTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTTGGGAGAAACGTCCTTaGGCAGTGATGAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: KTLYFSIAPPLKAALVHFWEKRP*AVMSHQ
Trigger: CTGATGACTCATCACTGCCCAAGGACGTTTCTCCCA...AAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAAGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAATAAAGCAAGTTGCTGTTGAGGTGTaGCGTGAAAACGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GREYGKDTLLILCLTIKQVAVEV*RENVQV
Trigger: GACCTGGACGTTTTCACGCCACACCTCAACAGCAAC...TTGCTTTATTGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR CCA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACATGTTATGGGGTTCTTaGGAGTTGAACGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNMLWGS*ELNVLL
Trigger: GAGCAGTACGTTCAACTCCCAAGAACCCCATAACAT...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CCA 90 bp CAAACAACTCGATGCTGTAAGAAGACAAGCTGTTTGAGCTTTCAAACACACATGAGTGGCAGGATGTTATaGGGTTCTTGGGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: QTTRCCKKTSCLSFQTHMSGRML*GSWELN
Trigger: GTTCAACTCCCAAGAACCCCATAACATCCTGCCACT...CATGTGTGTTTGAAAGCTCAAACAGCTTGTCTTCTTACAGCATCGAGTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR CCA 90 bp TTTGTTTCGATGTTTCTGGTTGATTTAGCCTTTCGAGTGCTTGTCATGCTCAGTAGTGGCAGGATGTTATaGGGTTCTTGGGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: FVSMFLVDLAFRVLVMLSSGRML*GSWELN
Trigger: GTTCAACTCCCAAGAACCCCATAACATCCTGCCACT...ACTGAGCATGACAAGCACTCGAAAGGCTAAATCAACCAGAAACATCGAAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582973.1
CDS-3UTR CCA 90 bp CCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTGAAAGATCACTGCAGTaGAAACTGTTCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PDLKRTRNSMSLCDKTRIERSLQ*KLFWKR
Trigger: CCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTC...AATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACTGCAGGCTTAACAGTTaGCATCGTACTGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNCRLNS*HRTELL
Trigger: CAAAAGCTCAGTACGATGCCAACTGTTAAGCCTGCA...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582512.5
ENST00000618996.4
CDS-3UTR TCA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAAGAAGACAAGCTGTTTaGGCTTTCAAACACACATGC +
Preference number: 4 (lower is better)
Translates to: GFDGREYGKDTLLILCLTRRQAV*AFKHTC
Trigger: GCATGTGTGTTTGAAAGCTCAAACAGCTTGTCTTCT...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR GCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGAAGTTTCTGAATAGTTaGCTTTCTGGCCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKKFLNS*LSGQQE
Trigger: TTCCTGCTGGCCAGAAAGGCAACTATTCAGAAACTT...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR GCA 90 bp AAAACCTTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGGATGTAGAGAAAAGTaGCTTAGAGTTGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KTLYFSIAPPLKAALVHFGCREK*LRVGLS
Trigger: GCTCAGGCCAACTCTAAGGCACTTTTCTCTACATCC...AAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAATGGTCAGACACACCTTaGCATTTGAGCAACATCTTG +
Preference number: 4 (lower is better)
Translates to: LKRTRNSMSLCDKTRIWKWSDTP*HLSNIL
Trigger: CAAGATGTTGCTCAAATGCCAAGGTGTGTCTGACCA...TTTCCAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp TTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGTCATTCCGGTTCTGGGTGACTaGAAATGCACCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LYFSIAPPLKAALVHFVIPVLGD*KCTFFL
Trigger: AAGAAAGAAGGTGCATTTCCAGTCACCCAGAACCGG...AATGACAAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp CAAACAACTCGATGCTGTAAGAAGACAAGCTGTTTGAGCTTTCAAACACACATGATGTTATGGGGTTCTTaGGAGTTGAACGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: QTTRCCKKTSCLSFQTHMMLWGS*ELNVLL
Trigger: GAGCAGTACGTTCAACTCCCAAGAACCCCATAACAT...CATGTGTGTTTGAAAGCTCAAACAGCTTGTCTTCTTACAGCATCGAGTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR CCA 90 bp AATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTACCTGCTAACCTAATGTaGGCAGAACTGAAAGATCAC +
Preference number: 4 (lower is better)
Translates to: NGFDGREYGKDTLLILCLPANLM*AELKDH
Trigger: GTGATCTTTCAGTTCTGCCCACATTAGGTTAGCAGG...TAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp AGGATTTTAGATCTTAATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGTGCAGGCTTAACAGTTaGCATCGTACTGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RILDLNGFDGREYGKDTLCRLNS*HRTELL
Trigger: CAAAAGCTCAGTACGATGCCAACTGTTAAGCCTGCA...CAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATTAAGATCTAAAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582672.1
CDS-3UTR TCA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACGACTGGGTGAATCCATaGATCAAAACTTTCACAACT +
Preference number: 4 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNDWVNP*IKTFTT
Trigger: AGTTGTGAAAGTTTTGATTCATGGATTCACCCAGTC...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR TCA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGCAGTTGGCATCGTACTaGAATGAAACGTGTATTAAC +
Preference number: 4 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKQLASY*NETCIN
Trigger: GTTAATACACGTTTCATTTCAGTACGATGCCAACTG...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp TTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTTGGAAAAGAAGACAAGCTGTTTaGGCTTTCAAACACACATGC +
Preference number: 4 (lower is better)
Translates to: LKRTRNSMSLCDKTRIWKRRQAV*AFKHTC
Trigger: GCATGTGTGTTTGAAAGCTCAAACAGCTTGTCTTCT...TTTCCAAATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CCA 90 bp GGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAATAAAGCAAAACGTCCAGGTCAAATaGATCAATGAGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GREYGKDTLLILCLTIKQNVQVK*INEGFQ
Trigger: CTGGAAGCCCTCATTGATCCATTTGACCTGGACGTT...TTGCTTTATTGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR TCA 90 bp TCTGTTACTTCCCACCCAACTAAAAGGGAAGATAAAACCATCATCACCAGAACAACTAGAATTTGGAAATaGGGACTGTCTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SVTSHPTKREDKTIITRTTRIWK*GLSWEK
Trigger: CTTTTCCCAAGACAGTCCTCATTTCCAAATTCTAGT...TGTTCTGGTGATGATGGTTTTATCTTCCCTTTTAGTTGGGTGGGAAGTAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR TCA 90 bp GGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAATAAAGCAATTCGATGTTTCTGGTTaGTTTAGCCTTTCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GREYGKDTLLILCLTIKQFDVSG*FSLSSA
Trigger: AGCACTCGAAAGGCTAAATCAACCAGAAACATCGAA...TTGCTTTATTGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS CCA 90 bp GCGCGGCCGAGCCGGCCTGGCGGAGGCGGGCGCAGTACTGGTCGGTaGCCTTCACGGCGTCCACTAGCCCCACGGCGCAGCGGCGCATCT +
Preference number: 5 (lower is better)
Translates to: ARPSRPGGGGRSTGR*PSRRPLAPRRSGAS
Trigger: AGATGCGCCGCTGCGCCGTGGGGCTAGTGGACGCCGTGAAGGCCACCGACCAGTACTGCGCCCGCCTCCGCCAGGCCGGCTCGGCCGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS CCA 90 bp TCACGGCGTCCACTAGCCCCACGGCGCAGCGGCGCATCTGGCCGATaGTGTCGGCCGCCTCGATCAGGTCGCGGTACCGTTCGCCCACCA +
Preference number: 5 (lower is better)
Translates to: SRRPLAPRRSGASGR*CRPPRSGRGTVRPP
Trigger: TGGTGGGCGAACGGTACCGCGACCTGATCGAGGCGGCCGACACCATCGGCCAGATGCGCCGCTGCGCCGTGGGGCTAGTGGACGCCGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS CCA 90 bp GTGGCCTTCACGGCGTCCACTAGCCCCACGGCGCAGCGGCGCATCTaGCCGATGGTGTCGGCCGCCTCGATCAGGTCGCGGTACCGTTCG +
Preference number: 5 (lower is better)
Translates to: VAFTASTSPTAQRRI*PMVSAASIRSRYRS
Trigger: CGAACGGTACCGCGACCTGATCGAGGCGGCCGACACCATCGGCCAGATGCGCCGCTGCGCCGTGGGGCTAGTGGACGCCGTGAAGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS TCA 90 bp GAAAAGAGCCGCAGGGTCGCGCAGATCCAGCCGCTTCAGCGCGGGTaGGGTTGCCGCGGTGGCCATGGTGCACTCGTCAGCCCCCGGCGA +
Preference number: 5 (lower is better)
Translates to: EKSRRVAQIQPLQRG*GCRGGHGALVSPRR
Trigger: TCGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGCTGGATCTGCGCGACCCTGCGGCTCTTTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS CCA 90 bp GGTCGCGCAGATCCAGCCGCTTCAGCGCGGGTGAGGTTGCCGCGGTaGCCATGGTGCACTCGTCAGCCCCCGGCGATCTACCTACGCCCT +
Preference number: 5 (lower is better)
Translates to: GRADPAASARVRLPR*PWCTRQPPAIYLRP
Trigger: AGGGCGTAGGTAGATCGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGCTGGATCTGCGCGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS GCA 90 bp TCGCGGTACCGTTCGCCCACCATCTGCCGCAGCTCCTCCTTCTTGTaGTCGATCTCGGCCCGAACCTGGCGCTCCAGCCCGCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SRYRSPTICRSSSFL*SISARTWRSSPRIS
Trigger: GGAGATCCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGATCGAGCACAAGAAGGAGGAGCTGCGGCAGATGGTGGGCGAACGGTACCGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS GCA 90 bp GTGTCGGCCGCCTCGATCAGGTCGCGGTACCGTTCGCCCACCATCTaGCGCAGCTCCTCCTTCTTGTGCTCGATCTCGGCCCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: VSAASIRSRYRSPTI*RSSSFLCSISARTW
Trigger: CCAGGTTCGGGCCGAGATCGAGCACAAGAAGGAGGAGCTGCGGCAGATGGTGGGCGAACGGTACCGCGACCTGATCGAGGCGGCCGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS GCA 90 bp GATCCAGCCGCTTCAGCGCGGGTGAGGTTGCCGCGGTGGCCATGGTaGACTCGTCAGCCCCCGGCGATCTACCTACGCCCTTTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: DPAASARVRLPRWPW*TRQPPAIYLRPFSP
Trigger: GGGACTAAAAGGGCGTAGGTAGATCGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGCTGGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS CCA 90 bp GCAGATCCAGCCGCTTCAGCGCGGGTGAGGTTGCCGCGGTGGCCATaGTGCACTCGTCAGCCCCCGGCGATCTACCTACGCCCTTTTAGT +
Preference number: 5 (lower is better)
Translates to: ADPAASARVRLPRWP*CTRQPPAIYLRPFS
Trigger: ACTAAAAGGGCGTAGGTAGATCGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGCTGGATCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS CCA 90 bp ATCTGCCGCAGCTCCTCCTTCTTGTGCTCGATCTCGGCCCGAACCTaGCGCTCCAGCCCGCGGATCTCCTCCGCTCCATGCGTCTCGAAA +
Preference number: 5 (lower is better)
Translates to: ICRSSSFLCSISART*RSSPRISSAPCVSK
Trigger: TTTCGAGACGCATGGAGCGGAGGAGATCCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGATCGAGCACAAGAAGGAGGAGCTGCGGCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS-3UTR CAA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGCCGGGGGCCATGTTaGTTACCCGAGGGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVERRGPC*LPEGAG
Trigger: GCCCGCCCCCTCGGGTAACAAACATGGCCCCCGGCG...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS TCA 90 bp GGGCTGATGGCTTGTGCTTTCATGGAGAGGCCGCTACTGGCAAACTaGCCCCGGTTTGCCACGCTGACCCAGGCCGCATCGGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GLMACAFMERPLLAN*PRFATLTQAASEGR
Trigger: CCTGCCTTCCGATGCGGCCTGGGTCAGCGTGGCAAACCGGGGTCAGTTTGCCAGTAGCGGCCTCTCCATGAAAGCACAAGCCATCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GCAGAGCAGGTAGAGCTGTGTGGCGTGGAGACACTGAGAGGCTTCCATCGAGCTCGCAGCTCCTCCTTCTaGTGCTCGATCTCGGCCCGA +
Preference number: 5 (lower is better)
Translates to: AEQVELCGVETLRGFHRARSSSF*CSISAR
Trigger: TCGGGCCGAGATCGAGCACAAGAAGGAGGAGCTGCG...AGCTCGATGGAAGCCTCTCAGTGTCTCCACGCCACACAGCTCTACCTGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CAA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCAGCGCGGGTGAGGTaGCCGCGGTGGCCATGGTGC +
Preference number: 5 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGSARVR*PRWPWC
Trigger: GCACCATGGCCACCGCGGCAACCTCACCCGCGCTGA...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR CAA 90 bp TCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGGGGTGGGAGAAACGTCCTaGGGCAGTGATGAGTCATCA +
Preference number: 5 (lower is better)
Translates to: SEQGARNCRVTSCGACRGVGETS*GSDESS
Trigger: TGATGACTCATCACTGCCCAAGGACGTTTCTCCCAC...CCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp CCCTCCGCGCGACGCCACTCGGAGTCCACACGGCACACACAAGCGGAGCTGAGAAATGATAGTGCCGGGTaGGCAGTTAACTCTTTCACC +
Preference number: 5 (lower is better)
Translates to: PSARRHSESTRHTQAELRNDSAG*AVNSFT
Trigger: GGTGAAAGAGTTAACTGCCAACCCGGCACTATCATT...TCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCCGAGTGGCGTCGCGCGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS TCA 90 bp CTTCAATGCTCTGTAGCTCTGCCCGGATGCAGTCCACGATGTGCTTaGTGCATGCCACGGACTGAGTCCGCAGCATCTCCTGCACGGTCC +
Preference number: 5 (lower is better)
Translates to: LQCSVALPGCSPRCA*CMPRTESAASPARS
Trigger: GGACCGTGCAGGAGATGCTGCGGACTCAGTCCGTGGCATGCATCAAGCACATCGTGGACTGCATCCGGGCAGAGCTACAGAGCATTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp CCCAGGATGCACTGCTTCAGATGGGGGCACAGCTCTCCCAGGGACTaGCAGAGTCTGGCCATGAAAAGAACTGAGTGCAGCTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: PRMHCFRWGHSSPRD*QSLAMKRTECSLAL
Trigger: CAGTGCCAAGCTGCACTCAGTTCTTTTCATGGCCAGACTCTGCCAGTCCCTGGGAGAGCTGTGCCCCCATCTGAAGCAGTGCATCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCAGCTTGGCACTGTaGAGGGCATCCTGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: DKLSEQGARNCRVTSCGACSLAL*RASCCP
Trigger: AGGGCAACAGGATGCCCTCAACAGTGCCAAGCTGCA...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGGCAGGGAGTCGGATCTaGGATGTGACACTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GVHTAHTSGAEKHDGSSQAGSRI*DVTLLP
Trigger: TGGCAGCAGTGTCACATCCAAGATCCGACTCCCTGC...CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS TCA 90 bp GCACAGCTCTCCCAGGGACTGGCAGAGTCTGGCCATGAAAAGAACTaGGTGCAGCTTGGCACTGTTGAGGGCATCCTGTTGCCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: AQLSQGLAESGHEKN*VQLGTVEGILLPLH
Trigger: GTGCAAGGGCAACAGGATGCCCTCAACAGTGCCAAGCTGCACTCAGTTCTTTTCATGGCCAGACTCTGCCAGTCCCTGGGAGAGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 90 bp GTTTTCTTAAACGGAGCCGGCTGGGAAGTGAGGTCGCCAGAGAGGTaGGGTCGCCAGGTTGGCTGCGAAACTGTGGCTGAAGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: VFLNGAGWEVRSPER*GRQVGCETVAEVFP
Trigger: AGGGAAGACTTCAGCCACAGTTTCGCAGCCAACCTGGCGACCTCACCTCTCTGGCGACCTCACTTCCCAGCCGGCTCCGTTTAAGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR CAA 90 bp ATTATAGAGCACAGGGCCTCGGCCACAGCTTGGTCAGACACACCTTGGCATTTGGGCCTCGGCCACAGCTaGGTCAGACACACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: IIEHRASATAWSDTPWHLGLGHS*VRHTLA
Trigger: TGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCC...CAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCCCTGTGCTCTATAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CAA 90 bp GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGGAAAAGGGCATGAGCTaGCTTCAGAGTGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: GVHTAHTSGAEKHDGSSQEKGMS*LQSGGQ
Trigger: CTGGCCACCACTCTGAAGCAAGCTCATGCCCTTTTC...CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGGCTGTCGGTCCAGATTaGAAGAGGACACGGAACAGC +
Preference number: 5 (lower is better)
Translates to: GVHTAHTSGAEKHDGSSQAVGPD*KRTRNS
Trigger: GCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGC...CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS TCA 90 bp AAGAGCGGCTTCTCCAGAAGCCGCCGACATAGCACATCCCAGCTGTaGTTGGTGGACTCATTGGTAAGTAACTCCCACATGGCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: KSGFSRSRRHSTSQL*LVDSLVSNSHMASR
Trigger: CCGGGACGCCATGTGGGAGTTACTTACCAATGAGTCCACCAATCACAGCTGGGATGTGCTATGTCGGCGGCTTCTGGAGAAGCCGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 90 bp TCCGGCCACTCTTCACCTCGTCACCCTTGGCTGTCAGAACAATGTTaGGGTAACGCAGATCATAAAGCAGCTGCAGCGCCCGGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SGHSSPRHPWLSEQC*GNADHKAAAAPGSG
Trigger: CCCAGAACCGGGCGCTGCAGCTGCTTTATGATCTGCGTTACCTCAACATTGTTCTGACAGCCAAGGGTGACGAGGTGAAGAGTGGCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000577844.1
ENST00000580271.5
ENST00000618996.4
CDS TCA 90 bp GTCGCCAGAGAGGTGAGGTCGCCAGGTTGGCTGCGAAACTGTGGCTaGAGTCTTCCCTTTCCCTTAGGAGCAGAGCTTCTCTGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: VAREVRSPGWLRNCG*SLPFPLGAELLCGV
Trigger: AACTCCACAGAGAAGCTCTGCTCCTAAGGGAAAGGGAAGACTTCAGCCACAGTTTCGCAGCCAACCTGGCGACCTCACCTCTCTGGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS CCA 90 bp CCTGCACGGTCCCCGCATCTGCGTATCTGTCAAAGGCAGAACTCTTaGCCTGTGTGGGAGAAACGTCCTTGGGCAGTGATGAGTCATCAG +
Preference number: 5 (lower is better)
Translates to: PARSPHLRICQRQNS*PVWEKRPWAVMSHQ
Trigger: CTGATGACTCATCACTGCCCAAGGACGTTTCTCCCACACAGGCCAAGAGTTCTGCCTTTGACAGATACGCAGATGCGGGGACCGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGACGCAGCTCCTCCTTCTaGTGCTCGATCTCGGCCCGA +
Preference number: 5 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGRSSSF*CSISAR
Trigger: TCGGGCCGAGATCGAGCACAAGAAGGAGGAGCTGCG...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTTGGGGTTCTTGGGAGTaGAACGTACTGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SSLTSCLNKEPGTVGSPAWGSWE*NVLLRG
Trigger: CCCCCGGAGCAGTACGTTCAACTCCCAAGAACCCCA...AGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGGATGTTATGGGGTTCTaGGGAGTTGAACGTACTGCT +
Preference number: 5 (lower is better)
Translates to: LSEQGARNCRVTSCGACRDVMGF*GVERTA
Trigger: AGCAGTACGTTCAACTCCCAAGAACCCCATAACATC...CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS TCA 90 bp AGTCGGATCTTGGATGTGACACTGCTGCCAGACTCTGCCTCCTCCTaGATTTCTAGCTCATCCCAGCTGGTGGCTGTGGCCAGAACTGAG +
Preference number: 5 (lower is better)
Translates to: SRILDVTLLPDSASS*ISSSSQLVAVARTE
Trigger: CTCAGTTCTGGCCACAGCCACCAGCTGGGATGAGCTAGAAATTCAGGAGGAGGCAGAGTCTGGCAGCAGTGTCACATCCAAGATCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 90 bp GATGCTGGCAGGTGTTTAAACCAGCTGCAGAGTTTCATCTCTTCCTaGAGGACACCAGTGCCCTTTCCGGCAGGATGCTGGCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: DAGRCLNQLQSFISS*RTPVPFPAGCWPVM
Trigger: CATCACAGGCCAGCATCCTGCCGGAAAGGGCACTGGTGTCCTGCAGGAAGAGATGAAACTCTGCAGCTGGTTTAAACACCTGCCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp GAAGAGCAAGCCACATGGCAGGGCTGGATCTGGCAGCAGTCCTTCTaGCAAAGTGTAGAAAAGGGCATGAGCTTGCTTCAGAGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: EEQATWQGWIWQQSF*QSVEKGMSLLQSGG
Trigger: GCCACCACTCTGAAGCAAGCTCATGCCCTTTTCTACACTTTGCCAGAAGGACTGCTGCCAGATCCAGCCCTGCCATGTGGCTTGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTCGCAGCTCCTCCTTCTaGTGCTCGATCTCGGCCCGA +
Preference number: 5 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTRSSSF*CSISAR
Trigger: TCGGGCCGAGATCGAGCACAAGAAGGAGGAGCTGCG...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTCAAGGGTTCGGAGTGTaGGCTGGAACTCGACGATGG +
Preference number: 5 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCQGFGV*AGTRRW
Trigger: CCATCGTCGAGTTCCAGCCAACACTCCGAACCCTTG...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGCAGGGAGTCGGATCTaGGATGTGACACTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SSLTSCLNKEPGTVGSPAAGSRI*DVTLLP
Trigger: TGGCAGCAGTGTCACATCCAAGATCCGACTCCCTGC...AGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTATTCTGGAGTCTGGCTaGCTCCGGCCACTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SSLTSCLNKEPGTVGSPAILESG*LRPLFT
Trigger: GGTGAAGAGTGGCCGGAGCAAGCCAGACTCCAGAAT...AGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CAA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCATTCTGGAGTCTGGCTaGCTCCGGCCACTCTTCACC +
Preference number: 5 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTILESG*LRPLFT
Trigger: GGTGAAGAGTGGCCGGAGCAAGCCAGACTCCAGAAT...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CAA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTGGGGTTCTTGGGAGTaGAACGTACTGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGWGSWE*NVLLRG
Trigger: CCCCCGGAGCAGTACGTTCAACTCCCAAGAACCCCA...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCTGGGGTTCTTGGGAGTaGAACGTACTGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVWGSWE*NVLLRG
Trigger: CCCCCGGAGCAGTACGTTCAACTCCCAAGAACCCCA...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS GCA 90 bp ATCCAGGGCAGAACAGAAGTTCTGTACACAAGGGCTGATGGCTTGTaGTTTCATGGAGAGGCCGCTACTGGCAAACTGACCCCGGTTTGC +
Preference number: 5 (lower is better)
Translates to: IQGRTEVLYTRADGL*FHGEAATGKLTPVC
Trigger: GCAAACCGGGGTCAGTTTGCCAGTAGCGGCCTCTCCATGAAAGCACAAGCCATCAGCCCTTGTGTACAGAACTTCTGTTCTGCCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 90 bp TGCCCCGCAGAAGCCTCTTGGCAGCCTTTACCTGATCTGACTGGATaGCAGTGGCAGGATGTTATGGGGTTCTTGGGAGTTGAACGTACT +
Preference number: 5 (lower is better)
Translates to: CPAEASWQPLPDLTG*QWQDVMGFLGVERT
Trigger: AGTACGTTCAACTCCCAAGAACCCCATAACATCCTGCCACTGGCATCCAGTCAGATCAGGTAAAGGCTGCCAAGAGGCTTCTGCGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577238.1
ENST00000580271.5
ENST00000582973.1
CDS-3UTR CAA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGCAAGGGTTCGGAGTGTaGGCTGGAACTCGACGATGG +
Preference number: 5 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRQGFGV*AGTRRW
Trigger: CCATCGTCGAGTTCCAGCCAACACTCCGAACCCTTG...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGGTTGAGGGCATCCTGTaGCCCTTGCACACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VLSSSLTSCLNKEPGTVGVEGIL*PLHTLF
Trigger: GAAGAGGGTGTGCAAGGGCAACAGGATGCCCTCAAC...CCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GTCAGAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGTGCAGCTTGGCACTGTaGAGGGCATCCTGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: VRGLCCRSRFEEDTEQHECSLAL*RASCCP
Trigger: AGGGCAACAGGATGCCCTCAACAGTGCCAAGCTGCA...CTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp TCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTAGAACTGAGTGCAGCTaGGCACTGTTGAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: SSLTSCLNKEPGTVGSPARTECS*ALLRAS
Trigger: GGATGCCCTCAACAGTGCCAAGCTGCACTCAGTTCT...AGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GGAGTCCACACGGCACACACAAGCGGAGCTGAGAAGCACGATGGCTCTAGTCAGTACTTCTTTAACCTCTaGCCACTTGGCCTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: GVHTAHTSGAEKHDGSSQYFFNL*PLGLCR
Trigger: CCTACACAGGCCAAGTGGCAAGAGGTTAAAGAAGTA...CTGACTAGAGCCATCGTGCTTCTCAGCTCCGCTTGTGTGTGCCGTGTGGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp CTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGCCGGCATCGTACTGAGCTTTaGTTTCGATGTTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LSEQGARNCRVTSCGACRHRTEL*FRCFWL
Trigger: CAACCAGAAACATCGAAACAAAAGCTCAGTACGATG...CCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582512.5
ENST00000618996.4
CDS TCA 90 bp ACTGTACATACCAGGACGGCTGTGCAGGGAGTCGGATCTTGGATGTaGCACTGCTGCCAGACTCTGCCTCCTCCTGAATTTCTAGCTCAT +
Preference number: 5 (lower is better)
Translates to: TVHTRTAVQGVGSWM*HCCQTLPPPEFLAH
Trigger: ATGAGCTAGAAATTCAGGAGGAGGCAGAGTCTGGCAGCAGTGTCACATCCAAGATCCGACTCCCTGCACAGCCGTCCTGGTATGTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 90 bp GGGATGTGCAAGGGTTCGGAGTGTTGGCTGGAACTCGACGATGGATaGTGGCAGGTGTTTAAACCAGCTGCAGAGTTTCATCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GMCKGSECWLELDDG*WQVFKPAAEFHLFL
Trigger: CAGGAAGAGATGAAACTCTGCAGCTGGTTTAAACACCTGCCAGCATCCATCGTCGAGTTCCAGCCAACACTCCGAACCCTTGCACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 90 bp CCATTTCTGCAGCGTGTCTTTCAGGTATTCCTGACTGATGGGATGTaGAAGGGTTCGGAGTGTTGGCTGGAACTCGACGATGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: PFLQRVFQVFLTDGM*KGSECWLELDDGCW
Trigger: CCAGCATCCATCGTCGAGTTCCAGCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAATACCTGAAAGACACGCTGCAGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp GGCGTGAAAACGTCCAGGTCAAATGGATCAATGAGGGCTTCCAGGTaGTCAGTCACTTTCTCAATTCTGGAGTCTGGCTTGCTCCGGCCA +
Preference number: 5 (lower is better)
Translates to: GVKTSRSNGSMRASR*SVTFSILESGLLRP
Trigger: TGGCCGGAGCAAGCCAGACTCCAGAATTGAGAAAGTGACTGACCACCTGGAAGCCCTCATTGATCCATTTGACCTGGACGTTTTCACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000580271.5
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CAA 90 bp ACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTAGGAAGAGCGACATGTaGTACTCAAAGTGGATGTGC +
Preference number: 5 (lower is better)
Translates to: TSCLNKEPGTVGSPAVERRKSDM*YSKWMC
Trigger: GCACATCCACTTTGAGTACAACATGTCGCTCTTCCT...ACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAGAACTGAGTGCAGCTaGGCACTGTTGAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: RCRRVVFFTDKLSEQGARRTECS*ALLRAS
Trigger: GGATGCCCTCAACAGTGCCAAGCTGCACTCAGTTCT...CCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp CTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGGATGTTATGGGGTTCTaGGGAGTTGAACGTACTGCT +
Preference number: 5 (lower is better)
Translates to: LTSCLNKEPGTVGSPAVEDVMGF*GVERTA
Trigger: AGCAGTACGTTCAACTCCCAAGAACCCCATAACATC...CTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp ACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGTGAGAGCCAGCCAAGTTaGAATAATGAAGGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: TSCLNKEPGTVGSPAVERESQPS*NNEGAD
Trigger: GTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC...ACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGGGTGAGGTCGCCAGGTaGGCTGCGAAACTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLGEVAR*AAKLWL
Trigger: CAGCCACAGTTTCGCAGCCAACCTGGCGACCTCACC...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS-3UTR CAA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTCCTCCGCCATCTTCGTaGGGGGCGGAAGCGCTTCCG +
Preference number: 5 (lower is better)
Translates to: ILESQPSLNNEGADVLSSPPPSS*GAEALP
Trigger: CGGAAGCGCTTCCGCCCCCAACGAAGATGGCGGAGG...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS CCA 90 bp ATGTGCAAGGGTTCGGAGTGTTGGCTGGAACTCGACGATGGATGCTaGCAGGTGTTTAAACCAGCTGCAGAGTTTCATCTCTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: MCKGSECWLELDDGC*QVFKPAAEFHLFLQ
Trigger: CTGCAGGAAGAGATGAAACTCTGCAGCTGGTTTAAACACCTGCCAGCATCCATCGTCGAGTTCCAGCCAACACTCCGAACCCTTGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp TGCCAGACTCTGCCTCCTCCTGAATTTCTAGCTCATCCCAGCTGGTaGCTGTGGCCAGAACTGAGCCAGCATCATCTAGAAGTAATGACT +
Preference number: 5 (lower is better)
Translates to: CQTLPPPEFLAHPSW*LWPELSQHHLEVMT
Trigger: AGTCATTACTTCTAGATGATGCTGGCTCAGTTCTGGCCACAGCCACCAGCTGGGATGAGCTAGAAATTCAGGAGGAGGCAGAGTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp AACAGAAGTTCGCTGCACCAGGCGATGAAGGTTGCTGTTGAGGTGTaGCGTGAAAACGTCCAGGTCAAATGGATCAATGAGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: NRSSLHQAMKVAVEV*RENVQVKWINEGFQ
Trigger: CTGGAAGCCCTCATTGATCCATTTGACCTGGACGTTTTCACGCCACACCTCAACAGCAACCTTCATCGCCTGGTGCAGCGAACTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000577238.1
ENST00000580271.5
ENST00000582512.5
ENST00000582672.1
ENST00000618996.4
CDS-3UTR CAA 90 bp GGAAACCGGGAGAGGACGGGACTGTATCGGGAACTAGAAGAATCCAGCTGGAGCGACACACCTTGGCATTaGAGCAACATCTTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: GNRERTGLYRELEESSWSDTPWH*SNILLS
Trigger: TGAAAGCAAGATGTTGCTCAAATGCCAAGGTGTGTC...GCTCCAGCTGGATTCTTCTAGTTCCCGATACAGTCCCGTCCTCTCCCGGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582587.2
CDS-3UTR CAA 90 bp GACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGCGACGTACATGAGCAGGTaGGTGATCCCATTTTTAATG +
Preference number: 5 (lower is better)
Translates to: DKLSEQGARNCRVTSCGATYMSR*VIPFLM
Trigger: CATTAAAAATGGGATCACCAACCTGCTCATGTACGT...CGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGCATCCTGTTGCCCTaGCACACCCTCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPGILLP*HTLFNA
Trigger: AGCATTGAAGAGGGTGTGCAAGGGCAACAGGATGCC...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCACCTGTAATGTCACCTTaGGCAAGGCATGGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPPVMSP*ARHGLQ
Trigger: TTGGAGGCCATGCCTTGCCAAAGGTGACATTACAGG...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTTTCACCTCGTCACCCTaGGCTGTCAGAACAATGTTG +
Preference number: 5 (lower is better)
Translates to: FTDKLSEQGARNCRVTSCFTSSP*AVRTML
Trigger: CAACATTGTTCTGACAGCCAAGGGTGACGAGGTGAA...ACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CAA 90 bp ACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTGTGGAGAGAGCCAGCCAAGTTaGAATAATGAAGGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: TDKLSEQGARNCRVTSCGESQPS*NNEGAD
Trigger: GTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC...TCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS TCA 90 bp CTTCCATCGAGCTCCAGATCTTCTCCGGAATTTCTAAGAGTAGCTTaGTCTGGGCAGCCATGCTGTAGAACTTCTCCTGGGATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPSSSRSSPEFLRVA*SGQPCCRTSPGMAA
Trigger: AGCAGCCATCCCAGGAGAAGTTCTACAGCATGGCTGCCCAGATCAAGCTACTCTTAGAAATTCCGGAGAAGATCTGGAGCTCGATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS TCA 90 bp ACATGTGGATCCATTTCTGCAGCGTGTCTTTCAGGTATTCCTGACTaGTGGGATGTGCAAGGGTTCGGAGTGTTGGCTGGAACTCGACGA +
Preference number: 5 (lower is better)
Translates to: TCGSISAACLSGIPD*WDVQGFGVLAGTRR
Trigger: TCGTCGAGTTCCAGCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAATACCTGAAAGACACGCTGCAGAAATGGATCCACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 90 bp CCAGTCACCAATCCAAACAGAACAGAAGTTCGCTGCACCAGGCGATaGAGGTTGCTGTTGAGGTGTGGCGTGAAAACGTCCAGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: PVTNPNRTEVRCTRR*RLLLRCGVKTSRSN
Trigger: ATTTGACCTGGACGTTTTCACGCCACACCTCAACAGCAACCTTCATCGCCTGGTGCAGCGAACTTCTGTTCTGTTTGGATTGGTGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000577238.1
ENST00000580271.5
ENST00000582512.5
ENST00000582672.1
ENST00000618996.4
CDS TCA 90 bp GTGGGGACCCATCCACGGATGAGCCTCTTGCTCTTGGCACCAACCTaGGCTTTTGTTTCGATGTTTCTGGTTGATTTAGCCTTTCGAGTG +
Preference number: 5 (lower is better)
Translates to: VGTHPRMSLLLLAPT*AFVSMFLVDLAFRV
Trigger: CACTCGAAAGGCTAAATCAACCAGAAACATCGAAACAAAAGCTCAGGTTGGTGCCAAGAGCAAGAGGCTCATCCGTGGATGGGTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS CCA 90 bp TTTCAGGTATTCCTGACTGATGGGATGTGCAAGGGTTCGGAGTGTTaGCTGGAACTCGACGATGGATGCTGGCAGGTGTTTAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: FQVFLTDGMCKGSEC*LELDDGCWQVFKPA
Trigger: AGCTGGTTTAAACACCTGCCAGCATCCATCGTCGAGTTCCAGCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAATACCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp AATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGGCCTCGGCCACAGCTaGGTCAGACACACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: NNEGADVLSSSLTSCLNKGLGHS*VRHTLA
Trigger: TGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCC...CTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGAAACCAAGAGCTCCTaGGAGCTACTGGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: EGADVLSSSLTSCLNKEPETKSS*ELLEME
Trigger: CTCCATCTCCAGTAGCTCCAAGGAGCTCTTGGTTTC...TGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCAGTGGATGTGCTTATTaGAAGGGGAGTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VVFFTDKLSEQGARNCRVSGCAY*KGSCWC
Trigger: GCACCAGCAACTCCCCTTCAAATAAGCACATCCACT...GACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTGGGAGAAACGTCCTaGGGCAGTGATGAGTCATCA +
Preference number: 5 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTVGETS*GSDESS
Trigger: TGATGACTCATCACTGCCCAAGGACGTTTCTCCCAC...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTTCAAAGGCAGAACTCTaGGCCTGTGTGGGAGAAACG +
Preference number: 5 (lower is better)
Translates to: ADVLSSSLTSCLNKEPGTSKAEL*ACVGET
Trigger: CGTTTCTCCCACACAGGCCAAGAGTTCTGCCTTTGA...AGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTGGCATCCTGTTGCCCTaGCACACCCTCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: VGPDLKRTRNSMSLCDKTGILLP*HTLFNA
Trigger: AGCATTGAAGAGGGTGTGCAAGGGCAACAGGATGCC...AGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGTTCACCTCGTCACCCTaGGCTGTCAGAACAATGTTG +
Preference number: 5 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRFTSSP*AVRTML
Trigger: CAACATTGTTCTGACAGCCAAGGGTGACGAGGTGAA...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CAA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAGAAGGTGCAGACGTGTaGTCTTCTTCACTGACAAGC +
Preference number: 5 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGEGADV*SSSLTS
Trigger: GCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS TCA 90 bp TTACACATGTGGATCCATTTCTGCAGCGTGTCTTTCAGGTATTCCTaGCTGATGGGATGTGCAAGGGTTCGGAGTGTTGGCTGGAACTCG +
Preference number: 5 (lower is better)
Translates to: LHMWIHFCSVSFRYS*LMGCARVRSVGWNS
Trigger: CGAGTTCCAGCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAATACCTGAAAGACACGCTGCAGAAATGGATCCACATGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp AGGATTTTAGATCTTAATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGGGCCTCGGCCACAGCTaGGTCAGACACACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RILDLNGFDGREYGKDTLGLGHS*VRHTLA
Trigger: TGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAGGCC...CAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATTAAGATCTAAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp GTCAGAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGTCGGTCAAGGAACAGTaGCTGCATCATATCTTCCCA +
Preference number: 5 (lower is better)
Translates to: VRGLCCRSRFEEDTEQHESVKEQ*LHHIFP
Trigger: TGGGAAGATATGATGCAGCAACTGTTCCTTGACCGA...CTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp AGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGTCGGTCAAGGAACAGTaGCTGCATCATATCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RCRRVVFFTDKLSEQGARSVKEQ*LHHIFP
Trigger: TGGGAAGATATGATGCAGCAACTGTTCCTTGACCGA...CCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACATGGGGTTCTTGGGAGTaGAACGTACTGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GFDGREYGKDTLLILCLTWGSWE*NVLLRG
Trigger: CCCCCGGAGCAGTACGTTCAACTCCCAAGAACCCCA...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR CAA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTGGGGTTCTTGGGAGTaGAACGTACTGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: ILESQPSLNNEGADVLSSWGSWE*NVLLRG
Trigger: CCCCCGGAGCAGTACGTTCAACTCCCAAGAACCCCA...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGAGAGCCAGCCAAGTTaGAATAATGAAGGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRESQPS*NNEGAD
Trigger: GTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp GTGGGCAGAACTGAAAGATCACTGCAGTGGAAACTGTTCTGGAAGAGGCTGCAACTATTAAGAGGCTACTaGGTAGTGTCAGCGGGCATC +
Preference number: 5 (lower is better)
Translates to: VGRTERSLQWKLFWKRLQLLRGY*VVSAGI
Trigger: GATGCCCGCTGACACTACCAAGTAGCCTCTTAATAG...TTGCAGCCTCTTCCAGAACAGTTTCCACTGCAGTGATCTTTCAGTTCTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS GCA 90 bp AAGCCTTCTTTTGTCAGAGTCTGTAATCGGTCAAGGAACAGTTGCTaGATCATATCTTCCCAGAACAAGAGCGGCTTCTCCAGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: KPSFVRVCNRSRNSC*IISSQNKSGFSRSR
Trigger: GCGGCTTCTGGAGAAGCCGCTCTTGTTCTGGGAAGATATGATGCAGCAACTGTTCCTTGACCGATTACAGACTCTGACAAAAGAAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAGACACACCTTGGCATTaGAGCAACATCTTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: GADVLSSSLTSCLNKEPGDTPWH*SNILLS
Trigger: TGAAAGCAAGATGTTGCTCAAATGCCAAGGTGTGTC...TCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGACACACCTTGGCATTaGAGCAACATCTTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRDTPWH*SNILLS
Trigger: TGAAAGCAAGATGTTGCTCAAATGCCAAGGTGTGTC...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCAGAAAAGGGCATGAGCTaGCTTCAGAGTGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LESQPSLNNEGADVLSSSEKGMS*LQSGGQ
Trigger: CTGGCCACCACTCTGAAGCAAGCTCATGCCCTTTTC...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGTCAAAGCCTTCTTTaGTCAGAGTCTGTAATCGGT +
Preference number: 5 (lower is better)
Translates to: VFFTDKLSEQGARNCRVTSQSLL*SESVIG
Trigger: ACCGATTACAGACTCTGACAAAAGAAGGCTTTGACT...GGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCAGTCAAAGCCTTCTTTaGTCAGAGTCTGTAATCGGT +
Preference number: 5 (lower is better)
Translates to: FFTDKLSEQGARNCRVTSSQSLL*SESVIG
Trigger: ACCGATTACAGACTCTGACAAAAGAAGGCTTTGACT...GCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGTCAAAGGCAGAACTCTaGGCCTGTGTGGGAGAAACG +
Preference number: 5 (lower is better)
Translates to: ESQPSLNNEGADVLSSSLSKAEL*ACVGET
Trigger: CGTTTCTCCCACACAGGCCAAGAGTTCTGCCTTTGA...CAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACGTTGAGGGCATCCTGTaGCCCTTGCACACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNVEGIL*PLHTLF
Trigger: GAAGAGGGTGTGCAAGGGCAACAGGATGCCCTCAAC...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCATACTTCTTTAACCTCTaGCCACTTGGCCTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: LSSSLTSCLNKEPGTVGSYFFNL*PLGLCR
Trigger: CCTACACAGGCCAAGTGGCAAGAGGTTAAAGAAGTA...TGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCAGCTATAGGCAGCTACTACTaGAACCATACAGCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: SSLTSCLNKEPGTVGSPAIGSYY*NHTAFQ
Trigger: CTGAAAAGCTGTATGGTTCAAGTAGTAGCTGCCTAT...AGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GTCAGAGGACTTTGCTGTCGGTCCAGATTTGAAGAGGACACGGAACAGCATGAGCACCAACCTGAGCTTTaGTTTCGATGTTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: VRGLCCRSRFEEDTEQHEHQPEL*FRCFWL
Trigger: CAACCAGAAACATCGAAACAAAAGCTCAGGTTGGTG...CTCATGCTGTTCCGTGTCCTCTTCAAATCTGGACCGACAGCAAAGTCCTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS GCA 90 bp TGTACTCAAAGTGGATGTGCTTATTTGAAGGGGAGTTGCTGGTGCTaGTTTCAAGTTCCTGCAAAGCTGAAACCAAGAGCTCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: CTQSGCAYLKGSCWC*FQVPAKLKPRAPWS
Trigger: GCTCCAAGGAGCTCTTGGTTTCAGCTTTGCAGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACTTTGAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp AATGTCACCTTTGGCAAGGCATGGCCTCCAACCCGATTAATTTCCTaGCATAAACTAAACAGGAAGGACTGTACATACCAGGACGGCTGT +
Preference number: 5 (lower is better)
Translates to: NVTFGKAWPPTRLIS*HKLNRKDCTYQDGC
Trigger: ACAGCCGTCCTGGTATGTACAGTCCTTCCTGTTTAGTTTATGCCAGGAAATTAATCGGGTTGGAGGCCATGCCTTGCCAAAGGTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp ATGAAGGTTGCTGTTGAGGTGTGGCGTGAAAACGTCCAGGTCAAATaGATCAATGAGGGCTTCCAGGTGGTCAGTCACTTTCTCAATTCT +
Preference number: 5 (lower is better)
Translates to: MKVAVEVWRENVQVK*INEGFQVVSHFLNS
Trigger: AGAATTGAGAAAGTGACTGACCACCTGGAAGCCCTCATTGATCCATTTGACCTGGACGTTTTCACGCCACACCTCAACAGCAACCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000577238.1
ENST00000580271.5
ENST00000582512.5
ENST00000618996.4
CDS-3UTR CAA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACCTGTAATGTCACCTTaGGCAAGGCATGGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LESQPSLNNEGADVLSSSPVMSP*ARHGLQ
Trigger: TTGGAGGCCATGCCTTGCCAAAGGTGACATTACAGG...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp CGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGATAGGCAGCTACTACTaGAACCATACAGCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: RVVFFTDKLSEQGARNCRIGSYY*NHTAFQ
Trigger: CTGAAAAGCTGTATGGTTCAAGTAGTAGCTGCCTAT...CCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACTGTCGGGTCACCACATCGTACTGAGCTTTaGTTTCGATGTTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SSSLTSCLNKEPGTVGSPHRTEL*FRCFWL
Trigger: CAACCAGAAACATCGAAACAAAAGCTCAGTACGATG...TGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582512.5
ENST00000618996.4
CDS GCA 90 bp TGTTGTACTCAAAGTGGATGTGCTTATTTGAAGGGGAGTTGCTGGTaGTGCTTTCAAGTTCCTGCAAAGCTGAAACCAAGAGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: CCTQSGCAYLKGSCW*CFQVPAKLKPRAPW
Trigger: CCAAGGAGCTCTTGGTTTCAGCTTTGCAGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACTTTGAGTACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTGAAACCAAGAGCTCCTaGGAGCTACTGGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: ILESQPSLNNEGADVLSSETKSS*ELLEME
Trigger: CTCCATCTCCAGTAGCTCCAAGGAGCTCTTGGTTTC...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACAAGGAGCCAGGAACGGAGAGACAGATGTGTaGCCATGTTACTTAGTCATA +
Preference number: 5 (lower is better)
Translates to: CRRVVFFTDKLSEQGARNGETDV*PCYLVI
Trigger: TATGACTAAGTAACATGGCAACACATCTGTCTCTCC...GTTCCTGGCTCCTTGTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp CCAGATTTGAAGAGGACACGGAACAGCATGAGCCTTTGTGACAAAACTAGAATTGGGGACAACCTGCCATaGGATGTAGAGAAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: PDLKRTRNSMSLCDKTRIGDNLP*DVEKSA
Trigger: GGCACTTTTCTCTACATCCAATGGCAGGTTGTCCCC...AATTCTAGTTTTGTCACAAAGGCTCATGCTGTTCCGTGTCCTCTTCAAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS CCA 90 bp TTTCAAGTTCCTGCAAAGCTGAAACCAAGAGCTCCTTGGAGCTACTaGAGATGGAGTCAAAGCCTTCTTTTGTCAGAGTCTGTAATCGGT +
Preference number: 5 (lower is better)
Translates to: FQVPAKLKPRAPWSY*RWSQSLLLSESVIG
Trigger: ACCGATTACAGACTCTGACAAAAGAAGGCTTTGACTCCATCTCCAGTAGCTCCAAGGAGCTCTTGGTTTCAGCTTTGCAGGAACTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp ACATGTTGTACTCAAAGTGGATGTGCTTATTTGAAGGGGAGTTGCTaGTGCTGCTTTCAAGTTCCTGCAAAGCTGAAACCAAGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: TCCTQSGCAYLKGSC*CCFQVPAKLKPRAP
Trigger: AGGAGCTCTTGGTTTCAGCTTTGCAGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACTTTGAGTACAACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCAATTTCTAAGAGTAGCTaGATCTGGGCAGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: LESQPSLNNEGADVLSSSISKSS*IWAAML
Trigger: CAGCATGGCTGCCCAGATCAAGCTACTCTTAGAAAT...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp ACATTTCTATTAAGAGGCTACTTGGTAGTGTCAGCGGGCATCTTTTACACCTTCAGTGGATGTGCTTATTaGAAGGGGAGTTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: TFLLRGYLVVSAGIFYTFSGCAY*KGSCWC
Trigger: GCACCAGCAACTCCCCTTCAAATAAGCACATCCACT...GAAGGTGTAAAAGATGCCCGCTGACACTACCAAGTAGCCTCTTAATAGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTTCACCTCGTCACCCTaGGCTGTCAGAACAATGTTG +
Preference number: 5 (lower is better)
Translates to: ILESQPSLNNEGADVLSSFTSSP*AVRTML
Trigger: CAACATTGTTCTGACAGCCAAGGGTGACGAGGTGAA...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp GGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACAATAAAGCAAATTCTGGAGTCTGGCTaGCTCCGGCCACTCTTCACC +
Preference number: 5 (lower is better)
Translates to: GREYGKDTLLILCLTIKQILESG*LRPLFT
Trigger: GGTGAAGAGTGGCCGGAGCAAGCCAGACTCCAGAAT...TTGCTTTATTGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp ATACTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTGAAGGTGCAGACGTGTaGTCTTCTTCACTGACAAGC +
Preference number: 5 (lower is better)
Translates to: ILESQPSLNNEGADVLSSEGADV*SSSLTS
Trigger: GCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC...AGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACGAAGGTGCAGACGTGTaGTCTTCTTCACTGACAAGC +
Preference number: 5 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNEGADV*SSSLTS
Trigger: GCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438720.7
ENST00000582512.5
ENST00000582973.1
ENST00000618996.4
CDS TCA 90 bp ACTTCTTTAACCTCTTGCCACTTGGCCTGTGTAGGAATGATTTCCTaGGTTTTCACCTTTCCCTGTTTTCTCAGAGCCCTAAACTCCCTT +
Preference number: 5 (lower is better)
Translates to: TSLTSCHLACVGMIS*VFTFPCFLRALNSL
Trigger: AAGGGAGTTTAGGGCTCTGAGAAAACAGGGAAAGGTGAAAACTCAGGAAATCATTCCTACACAGGCCAAGTGGCAAGAGGTTAAAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 90 bp ATACAGCTTTTCAGCATCTCCTGTAATGTCACCTTTGGCAAGGCATaGCCTCCAACCCGATTAATTTCCTGGCATAAACTAAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: IQLFSISCNVTFGKA*PPTRLISWHKLNRK
Trigger: CTTCCTGTTTAGTTTATGCCAGGAAATTAATCGGGTTGGAGGCCATGCCTTGCCAAAGGTGACATTACAGGAGATGCTGAAAAGCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp AGGATTTTAGATCTTAATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGGAAGGTGCAGACGTGTaGTCTTCTTCACTGACAAGC +
Preference number: 5 (lower is better)
Translates to: RILDLNGFDGREYGKDTLEGADV*SSSLTS
Trigger: GCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTC...CAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATTAAGATCTAAAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCAACGTACATGAGCAGGTaGGTGATCCCATTTTTAATG +
Preference number: 5 (lower is better)
Translates to: LESQPSLNNEGADVLSSSTYMSR*VIPFLM
Trigger: CATTAAAAATGGGATCACCAACCTGCTCATGTACGT...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp TTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCACTGACAAGCTGTCTGAACTTAACCTCTTGCCACTaGGCCTGTGTAGGAATGATT +
Preference number: 5 (lower is better)
Translates to: LNNEGADVLSSSLTSCLNLTSCH*ACVGMI
Trigger: AATCATTCCTACACAGGCCAAGTGGCAAGAGGTTAA...GTTCAGACAGCTTGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000618996.4
CDS-3UTR CAA 90 bp AGGATTTTAGATCTTAATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGGATGTTATGGGGTTCTaGGGAGTTGAACGTACTGCT +
Preference number: 5 (lower is better)
Translates to: RILDLNGFDGREYGKDTLDVMGF*GVERTA
Trigger: AGCAGTACGTTCAACTCCCAAGAACCCCATAACATC...CAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATTAAGATCTAAAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438720.7
ENST00000582672.1
CDS-3UTR CAA 90 bp GCTTTTGTTTCGATGTTTCTGGTTGATTTAGCCTTTCGAGTGCTTGTCATGCTCGGACAACCTGAGCTTTaGTTTCGATGTTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AFVSMFLVDLAFRVLVMLGQPEL*FRCFWL
Trigger: CAACCAGAAACATCGAAACAAAAGCTCAGGTTGTCC...GAGCATGACAAGCACTCGAAAGGCTAAATCAACCAGAAACATCGAAACAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582973.1
CDS-3UTR CAA 90 bp CTAGAGAGCCAGCCAAGTTTGAATAATGAAGGTGCAGACGTGTTGTCTTCTTCAGGAGAGACAGATGTGTaGCCATGTTACTTAGTCATA +
Preference number: 5 (lower is better)
Translates to: LESQPSLNNEGADVLSSSGETDV*PCYLVI
Trigger: TATGACTAAGTAACATGGCAACACATCTGTCTCTCC...TGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438720.7
ENST00000582973.1
ENST00000618996.4
CDS-3UTR CAA 90 bp AGGATTTTAGATCTTAATGGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCAAGCTAGTAAAACCTaGTACTTCTCTATTGCGCCG +
Preference number: 5 (lower is better)
Translates to: RILDLNGFDGREYGKDTLQASKT*YFSIAP
Trigger: CGGCGCAATAGAGAAGTACAAGGTTTTACTAGCTTG...CAGTGTATCCTTTCCGTATTCCCTACCATCGAACCCATTAAGATCTAAAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS-3UTR CAA 90 bp GGGTTCGATGGTAGGGAATACGGAAAGGATACACTGCTAATATTGTGTCTAACACATCGTACTGAGCTTTaGTTTCGATGTTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GFDGREYGKDTLLILCLTHRTEL*FRCFWL
Trigger: CAACCAGAAACATCGAAACAAAAGCTCAGTACGATG...TGTTAGACACAATATTAGCAGTGTATCCTTTCCGTATTCCCTACCATCGAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582672.1
CDS-3UTR CAA 90 bp TTGTACTTCTCTATTGCGCCGCCATTAAAAGCAGCATTAGTGCATTTTGTCATTGGAGAGACAGATGTGTaGCCATGTTACTTAGTCATA +
Preference number: 5 (lower is better)
Translates to: LYFSIAPPLKAALVHFVIGETDV*PCYLVI
Trigger: TATGACTAAGTAACATGGCAACACATCTGTCTCTCC...AATGACAAAATGCACTAATGCTGCTTTTAATGGCGGCGCAATAGAGAAGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS CCA 72 bp GCGGCCGAGCCGGCCTGGCGGAGGCGGGCGCAGTACTaGTCGGTGGCCTTCACGGCGTCCACTAGCCCCACG +
Preference number: 6 (lower is better)
Translates to: AAEPAWRRRAQY*SVAFTASTSPT
Trigger: CGTGGGGCTAGTGGACGCCGTGAAGGCCACCGACCAGTACTGCGCCCGCCTCCGCCAGGCCGGCTCGGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS CCA 72 bp AGCCGGCCTGGCGGAGGCGGGCGCAGTACTGGTCGGTaGCCTTCACGGCGTCCACTAGCCCCACGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: SRPGGGGRSTGR*PSRRPLAPRRS
Trigger: GCTGCGCCGTGGGGCTAGTGGACGCCGTGAAGGCCACCGACCAGTACTGCGCCCGCCTCCGCCAGGCCGGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS CCA 72 bp ACGGCGTCCACTAGCCCCACGGCGCAGCGGCGCATCTaGCCGATGGTGTCGGCCGCCTCGATCAGGTCGCGG +
Preference number: 6 (lower is better)
Translates to: TASTSPTAQRRI*PMVSAASIRSR
Trigger: CCGCGACCTGATCGAGGCGGCCGACACCATCGGCCAGATGCGCCGCTGCGCCGTGGGGCTAGTGGACGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS CAA 90 bp GAGCCGCAGGGTCGCGCAGATCCAGCCGCTTCAGCGCGGGTGAGGTaGCCGCGGTGGCCATGGTGCACTCGTCAGCCCCCGGCGATCTAC +
Preference number: 6 (lower is better)
Translates to: EPQGRADPAASARVR*PRWPWCTRQPPAIY
Trigger: GTAGATCGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGCTGGATCTGCGCGACCCTGCGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS TCA 72 bp CGCAGGGTCGCGCAGATCCAGCCGCTTCAGCGCGGGTaGGGTTGCCGCGGTGGCCATGGTGCACTCGTCAGC +
Preference number: 6 (lower is better)
Translates to: RRVAQIQPLQRG*GCRGGHGALVS
Trigger: GCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGCTGGATCTGCGCGACCCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299886.9
ENST00000618996.4
CDS CCA 72 bp CCACTAGCCCCACGGCGCAGCGGCGCATCTGGCCGATaGTGTCGGCCGCCTCGATCAGGTCGCGGTACCGTT +
Preference number: 6 (lower is better)
Translates to: PLAPRRSGASGR*CRPPRSGRGTV
Trigger: AACGGTACCGCGACCTGATCGAGGCGGCCGACACCATCGGCCAGATGCGCCGCTGCGCCGTGGGGCTAGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS CCA 72 bp GCCGCTTCAGCGCGGGTGAGGTTGCCGCGGTGGCCATaGTGCACTCGTCAGCCCCCGGCGATCTACCTACGC +
Preference number: 6 (lower is better)
Translates to: AASARVRLPRWP*CTRQPPAIYLR
Trigger: GCGTAGGTAGATCGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS GCA 72 bp GCTTCAGCGCGGGTGAGGTTGCCGCGGTGGCCATGGTaGACTCGTCAGCCCCCGGCGATCTACCTACGCCCT +
Preference number: 6 (lower is better)
Translates to: ASARVRLPRWPW*TRQPPAIYLRP
Trigger: AGGGCGTAGGTAGATCGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS CCA 72 bp GATCCAGCCGCTTCAGCGCGGGTGAGGTTGCCGCGGTaGCCATGGTGCACTCGTCAGCCCCCGGCGATCTAC +
Preference number: 6 (lower is better)
Translates to: DPAASARVRLPR*PWCTRQPPAIY
Trigger: GTAGATCGCCGGGGGCTGACGAGTGCACCATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGCTGGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS CAA 90 bp AGGTCGCGGTACCGTTCGCCCACCATCTGCCGCAGCTCCTCCTTCTaGTGCTCGATCTCGGCCCGAACCTGGCGCTCCAGCCCGCGGATC +
Preference number: 6 (lower is better)
Translates to: RSRYRSPTICRSSSF*CSISARTWRSSPRI
Trigger: GATCCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGATCGAGCACAAGAAGGAGGAGCTGCGGCAGATGGTGGGCGAACGGTACCGCGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS GCA 72 bp ACCTGGCGCTCCAGCCCGCGGATCTCCTCCGCTCCATaGGTCTCGAAAAGAGCCGCAGGGTCGCGCAGATCC +
Preference number: 6 (lower is better)
Translates to: TWRSSPRISSAP*VSKRAAGSRRS
Trigger: GGATCTGCGCGACCCTGCGGCTCTTTTCGAGACGCATGGAGCGGAGGAGATCCGCGGGCTGGAGCGCCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS CCA 72 bp AGCTCCTCCTTCTTGTGCTCGATCTCGGCCCGAACCTaGCGCTCCAGCCCGCGGATCTCCTCCGCTCCATGC +
Preference number: 6 (lower is better)
Translates to: SSSFLCSISART*RSSPRISSAPC
Trigger: GCATGGAGCGGAGGAGATCCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGATCGAGCACAAGAAGGAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS GCA 72 bp GCCTCGATCAGGTCGCGGTACCGTTCGCCCACCATCTaGCGCAGCTCCTCCTTCTTGTGCTCGATCTCGGCC +
Preference number: 6 (lower is better)
Translates to: ASIRSRYRSPTI*RSSSFLCSISA
Trigger: GGCCGAGATCGAGCACAAGAAGGAGGAGCTGCGGCAGATGGTGGGCGAACGGTACCGCGACCTGATCGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582587.2
ENST00000618996.4
CDS TCA 72 bp GCTTGTGCTTTCATGGAGAGGCCGCTACTGGCAAACTaGCCCCGGTTTGCCACGCTGACCCAGGCCGCATCG +
Preference number: 6 (lower is better)
Translates to: ACAFMERPLLAN*PRFATLTQAAS
Trigger: CGATGCGGCCTGGGTCAGCGTGGCAAACCGGGGTCAGTTTGCCAGTAGCGGCCTCTCCATGAAAGCACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 72 bp GGGTGGCTCGGTGGGAGGTGGGGACCCATCCACGGATaGGCCTCTTGCTCTTGGCACCAACCTGAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: GWLGGRWGPIHG*ASCSWHQPELL
Trigger: CAAAAGCTCAGGTTGGTGCCAAGAGCAAGAGGCTCATCCGTGGATGGGTCCCCACCTCCCACCGAGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS TCA 72 bp AACGGAGCCGGCTGGGAAGTGAGGTCGCCAGAGAGGTaGGGTCGCCAGGTTGGCTGCGAAACTGTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: NGAGWEVRSPER*GRQVGCETVAE
Trigger: TTCAGCCACAGTTTCGCAGCCAACCTGGCGACCTCACCTCTCTGGCGACCTCACTTCCCAGCCGGCTCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS TCA 72 bp CACCATGTTAGCCAGGATGGTCTCGATCTCCTGACGTaGTCCGTCCACCTTGGCCTCCCGAAGTGCCCCGCA +
Preference number: 6 (lower is better)
Translates to: HHVSQDGLDLLT*SVHLGLPKCPA
Trigger: TGCGGGGCACTTCGGGAGGCCAAGGTGGACGGATCACGTCAGGAGATCGAGACCATCCTGGCTAACATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577238.1
ENST00000580271.5
CDS CCA 72 bp CACCTTGGCCTCCCGAAGTGCCCCGCAGAAGCCTCTTaGCAGCCTTTACCTGATCTGACTGGATGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: HLGLPKCPAEAS*QPLPDLTGCQW
Trigger: CCACTGGCATCCAGTCAGATCAGGTAAAGGCTGCCAAGAGGCTTCTGCGGGGCACTTCGGGAGGCCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577238.1
ENST00000580271.5
ENST00000582973.1
CDS TCA 72 bp TCTGTAGCTCTGCCCGGATGCAGTCCACGATGTGCTTaGTGCATGCCACGGACTGAGTCCGCAGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: SVALPGCSPRCA*CMPRTESAASP
Trigger: AGGAGATGCTGCGGACTCAGTCCGTGGCATGCATCAAGCACATCGTGGACTGCATCCGGGCAGAGCTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 72 bp GAGCTCTCTGATTTTCCCAGGATGCACTGCTTCAGATaGGGGCACAGCTCTCCCAGGGACTGGCAGAGTCTG +
Preference number: 6 (lower is better)
Translates to: ELSDFPRMHCFR*GHSSPRDWQSL
Trigger: CAGACTCTGCCAGTCCCTGGGAGAGCTGTGCCCCCATCTGAAGCAGTGCATCCTGGGAAAATCAGAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 72 bp TGTACATACCAGGACGGCTGTGCAGGGAGTCGGATCTaGGATGTGACACTGCTGCCAGACTCTGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: CTYQDGCAGSRI*DVTLLPDSASS
Trigger: GGAGGAGGCAGAGTCTGGCAGCAGTGTCACATCCAAGATCCGACTCCCTGCACAGCCGTCCTGGTATGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 90 bp CCCAGGGACTGGCAGAGTCTGGCCATGAAAAGAACTGAGTGCAGCTaGGCACTGTTGAGGGCATCCTGTTGCCCTTGCACACCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: PRDWQSLAMKRTECS*ALLRASCCPCTPSS
Trigger: TGAAGAGGGTGTGCAAGGGCAACAGGATGCCCTCAACAGTGCCAAGCTGCACTCAGTTCTTTTCATGGCCAGACTCTGCCAGTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 72 bp ACCAGGACGGCTGTGCAGGGAGTCGGATCTTGGATGTaGCACTGCTGCCAGACTCTGCCTCCTCCTGAATTT +
Preference number: 6 (lower is better)
Translates to: TRTAVQGVGSWM*HCCQTLPPPEF
Trigger: AAATTCAGGAGGAGGCAGAGTCTGGCAGCAGTGTCACATCCAAGATCCGACTCCCTGCACAGCCGTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 72 bp GAGGTGAGGTCGCCAGGTTGGCTGCGAAACTGTGGCTaGAGTCTTCCCTTTCCCTTAGGAGCAGAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: EVRSPGWLRNCG*SLPFPLGAELL
Trigger: GAGAAGCTCTGCTCCTAAGGGAAAGGGAAGACTTCAGCCACAGTTTCGCAGCCAACCTGGCGACCTCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618996.4
CDS CAA 90 bp TCCTGCACGGTCCCCGCATCTGCGTATCTGTCAAAGGCAGAACTCTaGGCCTGTGTGGGAGAAACGTCCTTGGGCAGTGATGAGTCATCA +
Preference number: 6 (lower is better)
Translates to: SCTVPASAYLSKAEL*ACVGETSLGSDESS
Trigger: TGATGACTCATCACTGCCCAAGGACGTTTCTCCCACACAGGCCAAGAGTTCTGCCTTTGACAGATACGCAGATGCGGGGACCGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 72 bp GTCCCCGCATCTGCGTATCTGTCAAAGGCAGAACTCTaGGCCTGTGTGGGAGAAACGTCCTTGGGCAGTGAT +
Preference number: 6 (lower is better)
Translates to: VPASAYLSKAEL*ACVGETSLGSD
Trigger: ATCACTGCCCAAGGACGTTTCTCCCACACAGGCCAAGAGTTCTGCCTTTGACAGATACGCAGATGCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 72 bp TTCCTGACTGATGGGATGTGCAAGGGTTCGGAGTGTTaGCTGGAACTCGACGATGGATGCTGGCAGGTGTTT +
Preference number: 6 (lower is better)
Translates to: FLTDGMCKGSEC*LELDDGCWQVF
Trigger: AAACACCTGCCAGCATCCATCGTCGAGTTCCAGCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 72 bp ACTCTGCCTCCTCCTGAATTTCTAGCTCATCCCAGCTaGTGGCTGTGGCCAGAACTGAGCCAGCATCATCTA +
Preference number: 6 (lower is better)
Translates to: TLPPPEFLAHPS*WLWPELSQHHL
Trigger: TAGATGATGCTGGCTCAGTTCTGGCCACAGCCACCAGCTGGGATGAGCTAGAAATTCAGGAGGAGGCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 72 bp CTGGCCATGAAAAGAACTGAGTGCAGCTTGGCACTGTaGAGGGCATCCTGTTGCCCTTGCACACCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LAMKRTECSLAL*RASCCPCTPSS
Trigger: TGAAGAGGGTGTGCAAGGGCAACAGGATGCCCTCAACAGTGCCAAGCTGCACTCAGTTCTTTTCATGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 72 bp TGGCAGAGTCTGGCCATGAAAAGAACTGAGTGCAGCTaGGCACTGTTGAGGGCATCCTGTTGCCCTTGCACA +
Preference number: 6 (lower is better)
Translates to: WQSLAMKRTECS*ALLRASCCPCT
Trigger: TGTGCAAGGGCAACAGGATGCCCTCAACAGTGCCAAGCTGCACTCAGTTCTTTTCATGGCCAGACTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 90 bp AGAATCCAGGGCAGAACAGAAGTTCTGTACACAAGGGCTGATGGCTaGTGCTTTCATGGAGAGGCCGCTACTGGCAAACTGACCCCGGTT +
Preference number: 6 (lower is better)
Translates to: RIQGRTEVLYTRADG*CFHGEAATGKLTPV
Trigger: AACCGGGGTCAGTTTGCCAGTAGCGGCCTCTCCATGAAAGCACAAGCCATCAGCCCTTGTGTACAGAACTTCTGTTCTGCCCTGGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 90 bp TGGCAGAGTCTGGCCATGAAAAGAACTGAGTGCAGCTTGGCACTGTaGAGGGCATCCTGTTGCCCTTGCACACCCTCTTCAATGCTCTGT +
Preference number: 6 (lower is better)
Translates to: WQSLAMKRTECSLAL*RASCCPCTPSSMLC
Trigger: ACAGAGCATTGAAGAGGGTGTGCAAGGGCAACAGGATGCCCTCAACAGTGCCAAGCTGCACTCAGTTCTTTTCATGGCCAGACTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 72 bp TCTTCACCTCGTCACCCTTGGCTGTCAGAACAATGTTaGGGTAACGCAGATCATAAAGCAGCTGCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: SSPRHPWLSEQC*GNADHKAAAAP
Trigger: GGGCGCTGCAGCTGCTTTATGATCTGCGTTACCTCAACATTGTTCTGACAGCCAAGGGTGACGAGGTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000577844.1
ENST00000580271.5
ENST00000618996.4
CDS GCA 72 bp CAGCGTGTCTTTCAGGTATTCCTGACTGATGGGATGTaGAAGGGTTCGGAGTGTTGGCTGGAACTCGACGAT +
Preference number: 6 (lower is better)
Translates to: QRVFQVFLTDGM*KGSECWLELDD
Trigger: ATCGTCGAGTTCCAGCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAATACCTGAAAGACACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 72 bp GCTCAGTGGGAGAAGTCCAAACCTGATCTGACTGGATaGCAGTGGCAGGATGTTATGGGGTTCTTGGGAGTT +
Preference number: 6 (lower is better)
Translates to: AQWEKSKPDLTG*QWQDVMGFLGV
Trigger: AACTCCCAAGAACCCCATAACATCCTGCCACTGGCATCCAGTCAGATCAGGTTTGGACTTCTCCCACTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000582512.5
ENST00000582672.1
ENST00000618996.4
CDS GCA 72 bp GAAGCCTCTTGGCAGCCTTTACCTGATCTGACTGGATaGCAGTGGCAGGATGTTATGGGGTTCTTGGGAGTT +
Preference number: 6 (lower is better)
Translates to: EASWQPLPDLTG*QWQDVMGFLGV
Trigger: AACTCCCAAGAACCCCATAACATCCTGCCACTGGCATCCAGTCAGATCAGGTAAAGGCTGCCAAGAGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577238.1
ENST00000580271.5
ENST00000582973.1
CDS CCA 72 bp GGTTCGGAGTGTTGGCTGGAACTCGACGATGGATGCTaGCAGGTGTTTAAACCAGCTGCAGAGTTTCATCTC +
Preference number: 6 (lower is better)
Translates to: GSECWLELDDGC*QVFKPAAEFHL
Trigger: GAGATGAAACTCTGCAGCTGGTTTAAACACCTGCCAGCATCCATCGTCGAGTTCCAGCCAACACTCCGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 72 bp TCGCTGCACCAGGCGATGAAGGTTGCTGTTGAGGTGTaGCGTGAAAACGTCCAGGTCAAATGGATCAATGAG +
Preference number: 6 (lower is better)
Translates to: SLHQAMKVAVEV*RENVQVKWINE
Trigger: CTCATTGATCCATTTGACCTGGACGTTTTCACGCCACACCTCAACAGCAACCTTCATCGCCTGGTGCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000577238.1
ENST00000580271.5
ENST00000582512.5
ENST00000582672.1
ENST00000618996.4
CDS TCA 72 bp TCCATTTCTGCAGCGTGTCTTTCAGGTATTCCTGACTaGTGGGATGTGCAAGGGTTCGGAGTGTTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: SISAACLSGIPD*WDVQGFGVLAG
Trigger: TCCAGCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAATACCTGAAAGACACGCTGCAGAAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 72 bp TGGATCCATTTCTGCAGCGTGTCTTTCAGGTATTCCTaGCTGATGGGATGTGCAAGGGTTCGGAGTGTTGGC +
Preference number: 6 (lower is better)
Translates to: WIHFCSVSFRYS*LMGCARVRSVG
Trigger: GCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAATACCTGAAAGACACGCTGCAGAAATGGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 72 bp TTCTCCAGAAGCCGCCGACATAGCACATCCCAGCTGTaGTTGGTGGACTCATTGGTAAGTAACTCCCACATG +
Preference number: 6 (lower is better)
Translates to: FSRSRRHSTSQL*LVDSLVSNSHM
Trigger: CATGTGGGAGTTACTTACCAATGAGTCCACCAATCACAGCTGGGATGTGCTATGTCGGCGGCTTCTGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 72 bp AGAACAGAAGTTCTGTACACAAGGGCTGATGGCTTGTaGTTTCATGGAGAGGCCGCTACTGGCAAACTGACC +
Preference number: 6 (lower is better)
Translates to: RTEVLYTRADGL*FHGEAATGKLT
Trigger: GGTCAGTTTGCCAGTAGCGGCCTCTCCATGAAAGCACAAGCCATCAGCCCTTGTGTACAGAACTTCTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 72 bp GCTGTTGAGGTGTGGCGTGAAAACGTCCAGGTCAAATaGATCAATGAGGGCTTCCAGGTGGTCAGTCACTTT +
Preference number: 6 (lower is better)
Translates to: AVEVWRENVQVK*INEGFQVVSHF
Trigger: AAAGTGACTGACCACCTGGAAGCCCTCATTGATCCATTTGACCTGGACGTTTTCACGCCACACCTCAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000577238.1
ENST00000580271.5
ENST00000582512.5
ENST00000582672.1
ENST00000618996.4
CDS CAA 90 bp CTGGTAGCCCATCACGCTCTGCTGGAGGAGTACTTCTTTAACCTCTaGCCACTTGGCCTGTGTAGGAATGATTTCCTGAGTTTTCACCTT +
Preference number: 6 (lower is better)
Translates to: LVAHHALLEEYFFNL*PLGLCRNDFLSFHL
Trigger: AAGGTGAAAACTCAGGAAATCATTCCTACACAGGCCAAGTGGCAAGAGGTTAAAGAAGTACTCCTCCAGCAGAGCGTGATGGGCTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS TCA 72 bp CATCCACGGATGAGCCTCTTGCTCTTGGCACCAACCTaGGCTTTTGTTTCGATGTTTCTGGTTGATTTAGCC +
Preference number: 6 (lower is better)
Translates to: HPRMSLLLLAPT*AFVSMFLVDLA
Trigger: GGCTAAATCAACCAGAAACATCGAAACAAAAGCTCAGGTTGGTGCCAAGAGCAAGAGGCTCATCCGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438720.7
CDS CCA 72 bp AAGTGTAGAAAAGGGCATGAGCTTGCTTCAGAGTGGTaGCCAGCAACTCCACTAATGAGCAAATCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: KCRKGHELASEW*PATPLMSKSEP
Trigger: AGGCTCAGATTTGCTCATTAGTGGAGTTGCTGGCCACCACTCTGAAGCAAGCTCATGCCCTTTTCTACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 72 bp GCAAAGTGTAGAAAAGGGCATGAGCTTGCTTCAGAGTaGTGGCCAGCAACTCCACTAATGAGCAAATCTGAG +
Preference number: 6 (lower is better)
Translates to: AKCRKGHELASE*WPATPLMSKSE
Trigger: CTCAGATTTGCTCATTAGTGGAGTTGCTGGCCACCACTCTGAAGCAAGCTCATGCCCTTTTCTACACTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 72 bp CATCACGCTCTGCTGGAGGAGTACTTCTTTAACCTCTaGCCACTTGGCCTGTGTAGGAATGATTTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: HHALLEEYFFNL*PLGLCRNDFLS
Trigger: ACTCAGGAAATCATTCCTACACAGGCCAAGTGGCAAGAGGTTAAAGAAGTACTCCTCCAGCAGAGCGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 90 bp ACCAGAGGAAGAGCGACATGTTGTACTCAAAGTGGATGTGCTTATTaGAAGGGGAGTTGCTGGTGCTGCTTTCAAGTTCCTGCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: TRGRATCCTQSGCAY*KGSCWCCFQVPAKL
Trigger: CAGCTTTGCAGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACTTTGAGTACAACATGTCGCTCTTCCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 90 bp CGGATTCCCGCGAGACCCTTCATGCTCTTCACGTACATGAGCAGGTaGGTGATCCCATTTTTAATGTCTTCATTACACATGTGGATCCAT +
Preference number: 6 (lower is better)
Translates to: RIPARPFMLFTYMSR*VIPFLMSSLHMWIH
Trigger: ATGGATCCACATGTGTAATGAAGACATTAAAAATGGGATCACCAACCTGCTCATGTACGTGAAGAGCATGAAGGGTCTCGCGGGAATCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 72 bp TTTGTCAGAGTCTGTAATCGGTCAAGGAACAGTTGCTaGATCATATCTTCCCAGAACAAGAGCGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FVRVCNRSRNSC*IISSQNKSGFS
Trigger: GGAGAAGCCGCTCTTGTTCTGGGAAGATATGATGCAGCAACTGTTCCTTGACCGATTACAGACTCTGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 72 bp AGTGGATGTGCTTATTTGAAGGGGAGTTGCTGGTGCTaGTTTCAAGTTCCTGCAAAGCTGAAACCAAGAGCT +
Preference number: 6 (lower is better)
Translates to: SGCAYLKGSCWC*FQVPAKLKPRA
Trigger: AGCTCTTGGTTTCAGCTTTGCAGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 72 bp CAGAGGAAGAGCGACATGTTGTACTCAAAGTGGATGTaGTTATTTGAAGGGGAGTTGCTGGTGCTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: QRKSDMLYSKWM*LFEGELLVLLS
Trigger: TGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACTTTGAGTACAACATGTCGCTCTTCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS GCA 72 bp CAAAGTGGATGTGCTTATTTGAAGGGGAGTTGCTGGTaGTGCTTTCAAGTTCCTGCAAAGCTGAAACCAAGA +
Preference number: 6 (lower is better)
Translates to: QSGCAYLKGSCW*CFQVPAKLKPR
Trigger: TCTTGGTTTCAGCTTTGCAGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 72 bp TTTGGCAAGGCATGGCCTCCAACCCGATTAATTTCCTaGCATAAACTAAACAGGAAGGACTGTACATACCAG +
Preference number: 6 (lower is better)
Translates to: FGKAWPPTRLIS*HKLNRKDCTYQ
Trigger: CTGGTATGTACAGTCCTTCCTGTTTAGTTTATGCCAGGAAATTAATCGGGTTGGAGGCCATGCCTTGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CCA 72 bp TTCAGCATCTCCTGTAATGTCACCTTTGGCAAGGCATaGCCTCCAACCCGATTAATTTCCTGGCATAAACTA +
Preference number: 6 (lower is better)
Translates to: FSISCNVTFGKA*PPTRLISWHKL
Trigger: TAGTTTATGCCAGGAAATTAATCGGGTTGGAGGCCATGCCTTGCCAAAGGTGACATTACAGGAGATGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 72 bp AGAGCGACATGTTGTACTCAAAGTGGATGTGCTTATTaGAAGGGGAGTTGCTGGTGCTGCTTTCAAGTTCCT +
Preference number: 6 (lower is better)
Translates to: RATCCTQSGCAY*KGSCWCCFQVP
Trigger: AGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACTTTGAGTACAACATGTCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 72 bp TCATTAGGACTCTCAGACCAGAGGAAGAGCGACATGTaGTACTCAAAGTGGATGTGCTTATTTGAAGGGGAG +
Preference number: 6 (lower is better)
Translates to: SLGLSDQRKSDM*YSKWMCLFEGE
Trigger: CTCCCCTTCAAATAAGCACATCCACTTTGAGTACAACATGTCGCTCTTCCTCTGGTCTGAGAGTCCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299886.9
ENST00000438720.7
ENST00000618996.4
CDS CAA 72 bp ATGAATTCCCAGTCCCCACCCATGAAGAGAGAGGACTaGGTATGTGAGCGTAATAAACAGCTTCAAGTTTTG +
Preference number: 6 (lower is better)
Translates to: MNSQSPPMKRED*VCERNKQLQVL
Trigger: CAAAACTTGAAGCTGTTTATTACGCTCACATACCAAGTCCTCTCTCTTCATGGGTGGGGACTGGGAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577844.1
CDS CAA 72 bp TGGGTTTTATTCTACTTAGTTGCTGGCTTAGTACGTTaGTCACTGATGATAGTGCTTAAGTCACCCTCAAGC +
Preference number: 6 (lower is better)
Translates to: WVLFYLVAGLVR*SLMIVLKSPSS
Trigger: GCTTGAGGGTGACTTAAGCACTATCATCAGTGACAAACGTACTAAGCCAGCAACTAAGTAGAATAAAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577238.1
CDS CAA 90 bp TCTTGGAGTTGGGTTTTATTCTACTTAGTTGCTGGCTTAGTACGTTaGTCACTGATGATAGTGCTTAAGTCACCCTCAAGCATGATGTCT +
Preference number: 6 (lower is better)
Translates to: SWSWVLFYLVAGLVR*SLMIVLKSPSSMMS
Trigger: AGACATCATGCTTGAGGGTGACTTAAGCACTATCATCAGTGACAAACGTACTAAGCCAGCAACTAAGTAGAATAAAACCCAACTCCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577238.1
CDS CAA 90 bp GAGAGGACTTGGTATGTGAGCGTAATAAACAGCTTCAAGTTTTGGTaGAGTTTCAGCTTGCTATTTCAGAAGCAGATGGTTTTAATGCTC +
Preference number: 6 (lower is better)
Translates to: ERTWYVSVINSFKFW*SFSLLFQKQMVLML
Trigger: GAGCATTAAAACCATCTGCTTCTGAAATAGCAAGCTGAAACTCAACCAAAACTTGAAGCTGTTTATTACGCTCACATACCAAGTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577844.1
CDS CAA 72 bp TGGTATGTGAGCGTAATAAACAGCTTCAAGTTTTGGTaGAGTTTCAGCTTGCTATTTCAGAAGCAGATGGTT +
Preference number: 6 (lower is better)
Translates to: WYVSVINSFKFW*SFSLLFQKQMV
Trigger: AACCATCTGCTTCTGAAATAGCAAGCTGAAACTCAACCAAAACTTGAAGCTGTTTATTACGCTCACATACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577844.1
CDS CAA 72 bp GACTTGGTATGTGAGCGTAATAAACAGCTTCAAGTTTaGGTTGAGTTTCAGCTTGCTATTTCAGAAGCAGAT +
Preference number: 6 (lower is better)
Translates to: DLVCERNKQLQV*VEFQLAISEAD
Trigger: ATCTGCTTCTGAAATAGCAAGCTGAAACTCAACCAAAACTTGAAGCTGTTTATTACGCTCACATACCAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577844.1
CDS CAA 90 bp TATGTGAGCGTAATAAACAGCTTCAAGTTTTGGTTGAGTTTCAGCTaGCTATTTCAGAAGCAGATGGTTTTAATGCTCATATGGCCAGTT +
Preference number: 6 (lower is better)
Translates to: YVSVINSFKFWLSFS*LFQKQMVLMLIWPV
Trigger: AACTGGCCATATGAGCATTAAAACCATCTGCTTCTGAAATAGCAAGCTGAAACTCAACCAAAACTTGAAGCTGTTTATTACGCTCACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577844.1
CDS CAA 90 bp AAGAGAGAGGACTTGGTATGTGAGCGTAATAAACAGCTTCAAGTTTaGGTTGAGTTTCAGCTTGCTATTTCAGAAGCAGATGGTTTTAAT +
Preference number: 6 (lower is better)
Translates to: KREDLVCERNKQLQV*VEFQLAISEADGFN
Trigger: ATTAAAACCATCTGCTTCTGAAATAGCAAGCTGAAACTCAACCAAAACTTGAAGCTGTTTATTACGCTCACATACCAAGTCCTCTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577844.1
CDS CAA 72 bp GTAATAAACAGCTTCAAGTTTTGGTTGAGTTTCAGCTaGCTATTTCAGAAGCAGATGGTTTTAATGCTCATA +
Preference number: 6 (lower is better)
Translates to: VINSFKFWLSFS*LFQKQMVLMLI
Trigger: TATGAGCATTAAAACCATCTGCTTCTGAAATAGCAAGCTGAAACTCAACCAAAACTTGAAGCTGTTTATTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577844.1