RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COBLL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000082438

Ensembl transcript IDs: ENST00000342193.8, ENST00000375458.6, ENST00000409184.8, ENST00000414843.5, ENST00000434366.5, ENST00000439313.5, ENST00000444537.5, ENST00000445474.2, ENST00000448708.5, ENST00000452626.5, ENST00000456171.5, ENST00000456693.5, ENST00000460238.1, ENST00000474975.1, ENST00000480873.1, ENST00000483743.6, ENST00000489955.1, ENST00000491126.6, ENST00000493713.1, ENST00000493868.5, ENST00000493921.1, ENST00000495084.1, ENST00000496396.1, ENST00000629362.2, ENST00000652658.2

Found 798 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTATGGGTGGGAGAGGGGGCTCTGCCTCTTTAATGAGAGGAGCTaGAAAGTCACACAGCAAAAGGTACGGATGCAAGAGAGGGAAAGA +
Preference number: 1 (lower is better)
Translates to: SYGWERGLCLFNERS*KVTQQKVRMQERER
Trigger: TCTTTCCCTCTCTTGCATCCGTACCTTTTGCTGTGTGACTTTGCAGCTCCTCTCATTAAAGAGGCAGAGCCCCCTCTCCCACCCATAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR GCA 90 bp GATTGGTCTCATTTCAAGGACTTGGATAAGATGACAGAGTGTGTATaGTGTTGCCAGTGCCTAGTGGCCAAGGCCAGATCTGGCAGTTCA +
Preference number: 1 (lower is better)
Translates to: DWSHFKDLDKMTECV*CCQCLVAKARSGSS
Trigger: TGAACTGCCAGATCTGGCCTTGGCCACTAGGCACTGGCAACAGCATACACACTCTGTCATCTTATCCAAGTCCTTGAAATGAGACCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR CCA 90 bp CAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTaGAAAGCCCAGGGTGAAAGGTTTCACTTAAAGATGAAAGATTCA +
Preference number: 1 (lower is better)
Translates to: QRFPPSVWAQCTAPD*KAQGERFHLKMKDS
Trigger: TGAATCTTTCATCTTTAAGTGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
3UTR GCA 90 bp TCTTTAATGAGAGGAGCTGCAAAGTCACACAGCAAAAGGTACGGATaGAAGAGAGGGAAAGAACTGAGGCCATCACTGCTATCACAGCAA +
Preference number: 1 (lower is better)
Translates to: SLMRGAAKSHSKRYG*KRGKELRPSLLSQQ
Trigger: TTGCTGTGATAGCAGTGATGGCCTCAGTTCTTTCCCTCTCTTGCATCCGTACCTTTTGCTGTGTGACTTTGCAGCTCCTCTCATTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR GCA 90 bp GGGAAGAACAAATTAGTAATTGGATGTGGGACTCTGAGACTCCTCTaGTTCTGTGACCTTTGTAAAGTAGCAATCTTTGCACACCTTTTA +
Preference number: 1 (lower is better)
Translates to: GKNKLVIGCGTLRLL*FCDLCKVAIFAHLL
Trigger: TAAAAGGTGTGCAAAGATTGCTACTTTACAAAGGTCACAGAAGCAGAGGAGTCTCAGAGTCCCACATCCAATTACTAATTTGTTCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR TCA 90 bp CAACATTTCAAATACAGTGAAAGCAAGCAGAAACACATGAACCTTTaGGGGCTGGTCTTAGAACTGGCACAGTGTCATTTTCACTTCATT +
Preference number: 1 (lower is better)
Translates to: QHFKYSESKQKHMNL*GLVLELAQCHFHFI
Trigger: AATGAAGTGAAAATGACACTGTGCCAGTTCTAAGACCAGCCCTCAAAGGTTCATGTGTTTCTGCTTGCTTTCACTGTATTTGAAATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR TCA 90 bp CATAAAACACGACTTGTTCCACCACTCACTCTTGTCACTTGTTTTTaGGATGTATTCATGCTGACATATATAGCTCTAGCTTGTTCATTT +
Preference number: 1 (lower is better)
Translates to: HKTRLVPPLTLVTCF*DVFMLTYIALACSF
Trigger: AAATGAACAAGCTAGAGCTATATATGTCAGCATGAATACATCTCAAAAACAAGTGACAAGAGTGAGTGGTGGAACAAGTCGTGTTTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR TCA 90 bp CCAACTGAAGATTCAGAACAAATAACTTCCTATTCTGGTATCCCTTaGAATCTAGCACCAGTTTCTTCATCATTTGCTACATTTAGTCAT +
Preference number: 1 (lower is better)
Translates to: PTEDSEQITSYSGIP*NLAPVSSSFATFSH
Trigger: ATGACTAAATGTAGCAAATGATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAATCTTCAGTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAGTATGAAGTTGGTCTaGAGTGGAAGTGAAGTGCAG +
Preference number: 2 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSMKLV*SGSEVQ
Trigger: CTGCACTTCACTTCCACTTCAGACCAACTTCATACT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
3UTR-3UTR TCA 90 bp AATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACAGAGGTTTCCCTGGAAAGCCCAGGGTaGAAGGTTTCACTTAAAGAT +
Preference number: 2 (lower is better)
Translates to: NDVMAASGVPGHSKTEVSLESPG*KVSLKD
Trigger: ATCTTTAAGTGAAACCTTTCACCCTGGGCTTTCCAG...GGAAACCTCTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
3UTR-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTGGGAGAGGGGGCTCTaGCTCTTTAATGAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFWERGL*LFNERS
Trigger: GCTCCTCTCATTAAAGAGGCAGAGCCCCCTCTCCCA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAGTATGAAGTTGGTCTaGAGTGGAAGTGAAGTGCAG +
Preference number: 2 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASMKLV*SGSEVQ
Trigger: CTGCACTTCACTTCCACTTCAGACCAACTTCATACT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
3UTR-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTCCAATTGCTACACTaGGGCAGCAAATGTCATATC +
Preference number: 2 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFQLLH*GSKCHI
Trigger: GATATGACATTTGCTGCCTCAGTGTAGCAATTGGAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
3UTR-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGAGGGTCTCTCCAACTaGTTCAAGGAAAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFEGLSN*FKENSS
Trigger: GCTGCTGTTTTCCTTGAATCAGTTGGAGAGACCCTC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGGGAGCTCTGCTCCCTaGATCTCTCATCCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFGSSAP*ISHPFL
Trigger: AAGAAAAGGATGAGAGATGCAGGGAGCAGAGCTCCC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACAGTTCATGAAGAGGTaGAATCGGAAGAAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIAQFMKR*NRKKGH
Trigger: GTGACCCTTCTTCCGATTTCACCTCTTCATGAACTG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTCGCAAGGCGTGGGCTaGAAACTAAGAATAAACTGG +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFSQGVG*KLRINW
Trigger: CCAGTTTATTCTTAGTTTCCAGCCCACGCCTTGCGA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAATGTTCCATTAGTATaGAGTTGGTCTGAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFANVPLV*SWSEVE
Trigger: TTCCACTTCAGACCAACTTCATACTAATGGAACATT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
3UTR-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAAGATCTGGCAGTTCATaGAGAGGTGAAATCGGAAGA +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIARSGSS*RGEIGR
Trigger: TCTTCCGATTTCACCTCTTCATGAACTGCCAGATCT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATTAGACCATGCATTTTaGAGTCAGAATGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIALDHAF*SQNARA
Trigger: AGCCCTGGCATTCTGACTCCAAAATGCATGGTCTAA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACAATTCAGTCTTTCTTaGTTCCCACAGGTAACCACC +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIAQFSLS*FPQVTT
Trigger: GGTGGTTACCTGTGGGAACCAAGAAAGACTGAATTG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTCATCTGTGAGATTCTaGAGGAAACAGCGTTGTGGA +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFSSVRF*RKQRCG
Trigger: TCCACAACGCTGTTTCCTCCAGAATCTCACAGATGA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCCTCAGAAATCACTTTaGCCCTGGAAATCTTCACTA +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFPQKSL*PWKSSL
Trigger: TAGTGAAGATTTCCAGGGTCAAAGTGATTTCTGAGG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACCTCAGAAATCACTTTaGCCCTGGAAATCTTCACTA +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIAPQKSL*PWKSSL
Trigger: TAGTGAAGATTTCCAGGGTCAAAGTGATTTCTGAGG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTTGGATGTGGGACTCTaGGACTCCTCTGCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFILDVGL*DSSASV
Trigger: CACAGAAGCAGAGGAGTCTCAGAGTCCCACATCCAA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGCTAGACAGAAAGTCTaGGGTGTATTTGTGTTGGAT +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFARQKV*GVFVLD
Trigger: ATCCAACACAAATACACCTCAGACTTTCTGTCTAGC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAATTTTGGAGTCAGAATaGCAGGGCTTAAATGTACAC +
Preference number: 2 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQILESE*QGLNVH
Trigger: GTGTACATTTAAGCCCTGGCATTCTGACTCCAAAAT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTACTCTGAGACTCCTCTaGTTCTGTGACCTTTGTAAA +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFTLRLL*FCDLCK
Trigger: TTTACAAAGGTCACAGAAGCAGAGGAGTCTCAGAGT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGATCAGTTTGGGCGCAGTaGACTGCTCCTGACTGGAAA +
Preference number: 2 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRSVWAQ*TAPDWK
Trigger: TTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGA...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
3UTR-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCCTTGGTGGTATTGCTaGGGTAAGCATTTATTGCTT +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFPWWYC*GKHLLL
Trigger: AAGCAATAAATGCTTACCCCAGCAATACCACCAAGG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGATTTCCTCCATCAGTTTaGGCGCAGTGCACTGCTCCT +
Preference number: 2 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRFPPSV*AQCTAP
Trigger: AGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAA...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
3UTR-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCGAGGGTCTCTCCAACTaGTTCAAGGAAAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIEGLSN*FKENSS
Trigger: GCTGCTGTTTTCCTTGAATCAGTTGGAGAGACCCTC...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTACACAAGGCTGCCGTaGACATTTTTGCAGATGTCT +
Preference number: 2 (lower is better)
Translates to: EVYHMNICITKAEHGLGPYTRLP*TFLQMS
Trigger: AGACATCTGCAAAAATGTTCACGGCAGCCTTGTGTA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTAATTTCTTTCCCCATTaGCAGGATAGCACATGTTCT +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFNFFPH*QDSTCS
Trigger: AGAACATGTGCTATCCTGTCAATGGGGAAAGAAATT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTATTTTGGAGTCAGAATaGCAGGGCTTAAATGTACAC +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFILESE*QGLNVH
Trigger: GTGTACATTTAAGCCCTGGCATTCTGACTCCAAAAT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGCAGATGTCTCCTTATaGATGTGCATAAGTACTTAT +
Preference number: 2 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQADVSL*MCISTY
Trigger: ATAAGTACTTATGCACATGCATAAGGAGACATCTGC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTTTAATGAGAGGAGCTaGAAAGTCACACAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFFNERS*KVTQQK
Trigger: CTTTTGCTGTGTGACTTTGCAGCTCCTCTCATTAAA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTAAACCTTGGTGGTATTaGTGGGGTAAGCATTTATTG +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFKPWWY*WGKHLL
Trigger: CAATAAATGCTTACCCCAGCAATACCACCAAGGTTT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATCTCAGGACAAAGATTaGTCTCATTTCAAGGACTTG +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIASQDKD*SHFKDL
Trigger: CAAGTCCTTGAAATGAGACCAATCTTTGTCCTGAGA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATCAATTGGGACGCTTTaGGTTTTAAGCACCTATAAG +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIASIGTL*VLSTYK
Trigger: CTTATAGGTGCTTAAAACCCAAAGCGTCCCAATTGA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTTCCAATTGCTACACTaGGGCAGCAAATGTCATATC +
Preference number: 2 (lower is better)
Translates to: EVYHMNICITKAEHGLGPFQLLH*GSKCHI
Trigger: GATATGACATTTGCTGCCTCAGTGTAGCAATTGGAA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATTCCAATTGCTACACTaGGGCAGCAAATGTCATATC +
Preference number: 2 (lower is better)
Translates to: NICITKAEHGLGPLSAVLFQLLH*GSKCHI
Trigger: GATATGACATTTGCTGCCTCAGTGTAGCAATTGGAA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATGGAAATCTTCACTATaGCCTCTAATTGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIAWKSSL*PLIASS
Trigger: AGAACTTGCAATTAGAGGTCATAGTGAAGATTTCCA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATTTGTGAAGCAGAGATaGCAACAGATCTCTACAAAT +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIAFVKQR*QQISTN
Trigger: ATTTGTAGAGATCTGTTGGCATCTCTGCTTCACAAA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCAGTATGAAGTTGGTCTaGAGTGGAAGTGAAGTGCAG +
Preference number: 2 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFSMKLV*SGSEVQ
Trigger: CTGCACTTCACTTCCACTTCAGACCAACTTCATACT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCAAGAAACAATAGAATaGCTAACAGAAATACGATCG +
Preference number: 2 (lower is better)
Translates to: LGLLTSITHMADSASSFFQETIE*LTEIRS
Trigger: CGATCGTATTTCTGTTAGCCATTCTATTGTTTCTTG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAAATAACTTCCTATTCTaGTATCCCTTGAAATCTAGC +
Preference number: 2 (lower is better)
Translates to: YGCKRERIEAITMPIAIANNFLF*YPLKSS
Trigger: GCTAGATTTCAAGGGATACCAGAATAGGAAGTTATT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCATTAGTAATTGGATGTaGGACTCTGAGACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIISNWM*DSETPL
Trigger: CAGAGGAGTCTCAGAGTCCCACATCCAATTACTAAT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCAATTTCTTTCCCCATTaGCAGGATAGCACATGTTCT +
Preference number: 2 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFINFFPH*QDSTCS
Trigger: AGAACATGTGCTATCCTGTCAATGGGGAAAGAAATT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCAATGTTCCATTAGTATaGAGTTGGTCTGAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFNVPLV*SWSEVE
Trigger: TTCCACTTCAGACCAACTTCATACTAATGGAACATT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCGCAGATGTCTCCTTATaGATGTGCATAAGTACTTAT +
Preference number: 2 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIADVSL*MCISTY
Trigger: ATAAGTACTTATGCACATGCATAAGGAGACATCTGC...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR GCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCATAGAGAAAGTAATTTaGCCAAGATCCCATGACTCA +
Preference number: 2 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFIEKVI*PRSHDS
Trigger: TGAGTCATGGGATCTTGGGCAAATTACTTTCTCTAT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR CCA 72 bp AGTAAACTGGGGGCCTGGCTCTTAGGTGATCTAGGCTaGCCTCAGTTGGGAGCTCTGCTCCCTGCATCTCTC +
Preference number: 3 (lower is better)
Translates to: SKLGAWLLGDLG*PQLGALLPASL
Trigger: GAGAGATGCAGGGAGCAGAGCTCCCAACTGAGGCCAGCCTAGATCACCTAAGAGCCAGGCCCCCAGTTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR CCA 72 bp CCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTaGAAAGCCCAGGGTGAAAGGTTTCACTTAAAGATG +
Preference number: 3 (lower is better)
Translates to: PPSVWAQCTAPD*KAQGERFHLKM
Trigger: CATCTTTAAGTGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
3UTR-3UTR CAA 90 bp TTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAGTTTCCTCCATCAGTTaGGGCGCAGTGCACTGCTCC +
Preference number: 3 (lower is better)
Translates to: LFQMSMMLWLPQVSQGTQVSSIS*GAVHCS
Trigger: GGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAAC...TTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
3UTR CCA 72 bp CTTCATTCTGTTACTCTCAAAACCTGCTCCTATGGGTaGGAGAGGGGGCTCTGCCTCTTTAATGAGAGGAGC +
Preference number: 3 (lower is better)
Translates to: LHSVTLKTCSYG*ERGLCLFNERS
Trigger: GCTCCTCTCATTAAAGAGGCAGAGCCCCCTCTCCCACCCATAGGAGCAGGTTTTGAGAGTAACAGAATGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR GCA 72 bp AGAGGAGCTGCAAAGTCACACAGCAAAAGGTACGGATaGAAGAGAGGGAAAGAACTGAGGCCATCACTGCTA +
Preference number: 3 (lower is better)
Translates to: RGAAKSHSKRYG*KRGKELRPSLL
Trigger: TAGCAGTGATGGCCTCAGTTCTTTCCCTCTCTTGCATCCGTACCTTTTGCTGTGTGACTTTGCAGCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR CCA 72 bp CATTTATTGCTTACACATCAGAGTAAACTGGGGGCCTaGCTCTTAGGTGATCTAGGCTGGCCTCAGTTGGGA +
Preference number: 3 (lower is better)
Translates to: HLLLTHQSKLGA*LLGDLGWPQLG
Trigger: TCCCAACTGAGGCCAGCCTAGATCACCTAAGAGCCAGGCCCCCAGTTTACTCTGATGTGTAAGCAATAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR GCA 72 bp ATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATaGCTATCGCTATCGCAAGGCGTGGGCTGGAAACTA +
Preference number: 3 (lower is better)
Translates to: MDAREKELRPSL*LSLSQGVGWKL
Trigger: TAGTTTCCAGCCCACGCCTTGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTAGAGTGTGTATGCTGTaGCCAGTGCCTAGTGGCCAA +
Preference number: 3 (lower is better)
Translates to: LGLLTSITHMADSASSFFRVCML*PVPSGQ
Trigger: TTGGCCACTAGGCACTGGCAACAGCATACACACTCT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR GCA 72 bp ACAAACCTTGGTGGTATTGCTGGGGTAAGCATTTATTaGTTACACATCAGAGTAAACTGGGGGCCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: TNLGGIAGVSIY*LHIRVNWGPGS
Trigger: AGAGCCAGGCCCCCAGTTTACTCTGATGTGTAAGCAATAAATGCTTACCCCAGCAATACCACCAAGGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTaGCTTAACAGTTTTAGCTTC +
Preference number: 3 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRQMGIV*LNSFSF
Trigger: GAAGCTAAAACTGTTAAGCAAAACAATGCCCATTTG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
3UTR-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTACTTAGACCATGCATTTaGGAGTCAGAATGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLRPCI*ESECQG
Trigger: GCCCTGGCATTCTGACTCCAAAATGCATGGTCTAAG...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCAGAGTGTGTATGCTGTaGCCAGTGCCTAGTGGCCAA +
Preference number: 3 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIRVCML*PVPSGQ
Trigger: TTGGCCACTAGGCACTGGCAACAGCATACACACTCT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGTCTCAGGACAAAGATaGGTCTCATTTCAAGGACTT +
Preference number: 3 (lower is better)
Translates to: LGLLTSITHMADSASSFFVSGQR*VSFQGL
Trigger: AAGTCCTTGAAATGAGACCAATCTTTGTCCTGAGAC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR GCA 72 bp TTGGACTGCTGTGTGGAAGTCTATCATATGAATATATaGATTACTAAAGCTGAGCACGGGTTAGGACCCCTT +
Preference number: 3 (lower is better)
Translates to: LDCCVEVYHMNI*ITKAEHGLGPL
Trigger: AAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTCCACACAGCAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCTTAGACCATGCATTTaGGAGTCAGAATGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFILRPCI*ESECQG
Trigger: GCCCTGGCATTCTGACTCCAAAATGCATGGTCTAAG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACATCTTACATGTCGCTaGTCTTTAAGTCTTCAATCC +
Preference number: 3 (lower is better)
Translates to: YGCKRERIEAITMPIAIAHLTCR*SLSLQS
Trigger: GGATTGAAGACTTAAAGACAAGCGACATGTAAGATG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAATGAGTGAAAACTACTaGTCACAAATTTCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQMSENY*SQISFP
Trigger: GGGGAAAGAAATTTGTGACAAGTAGTTTTCACTCAT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTATGAGTGAAAACTACTaGTCACAAATTTCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: LGLLTSITHMADSASSFFMSENY*SQISFP
Trigger: GGGGAAAGAAATTTGTGACAAGTAGTTTTCACTCAT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGCCGACAAATGGGCATaGTTTTGCTTAACAGTTTTA +
Preference number: 3 (lower is better)
Translates to: EVYHMNICITKAEHGLGPADKWA*FCLTVL
Trigger: TAAAACTGTTAAGCAAAACAATGCCCATTTGTCGGC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGCCGACAAATGGGCATaGTTTTGCTTAACAGTTTTA +
Preference number: 3 (lower is better)
Translates to: NICITKAEHGLGPLSAVLADKWA*FCLTVL
Trigger: TAAAACTGTTAAGCAAAACAATGCCCATTTGTCGGC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTCAATTCAGTCTTTCTaGGTTCCCACAGGTAACCAC +
Preference number: 3 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFISIQSF*VPTGNH
Trigger: GTGGTTACCTGTGGGAACCAAGAAAGACTGAATTGA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR TCA 72 bp AGAGATGTCTTTCTCACAGCAACATTTCAAATACAGTaGAAGCAAGCAGAAACACATGAACCTTTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: RDVFLTATFQIQ*KQAETHEPLRA
Trigger: AGCCCTCAAAGGTTCATGTGTTTCTGCTTGCTTTCACTGTATTTGAAATGTTGCTGTGAGAAAGACATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR GCA 72 bp TTCTGCTGTTTTACACAAGGCTGCCGTGAACATTTTTaGAGATGTCTCCTTATGCATGTGCATAAGTACTTA +
Preference number: 3 (lower is better)
Translates to: FCCFTQGCREHF*RCLLMHVHKYL
Trigger: TAAGTACTTATGCACATGCATAAGGAGACATCTGCAAAAATGTTCACGGCAGCCTTGTGTAAAACAGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR GCA 72 bp AAATTAGTAATTGGATGTGGGACTCTGAGACTCCTCTaGTTCTGTGACCTTTGTAAAGTAGCAATCTTTGCA +
Preference number: 3 (lower is better)
Translates to: KLVIGCGTLRLL*FCDLCKVAIFA
Trigger: TGCAAAGATTGCTACTTTACAAAGGTCACAGAAGCAGAGGAGTCTCAGAGTCCCACATCCAATTACTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCCACCACTCACTCTaGTCACTTGTTTTTGAGATG +
Preference number: 3 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFFHHSL*SLVFEM
Trigger: CATCTCAAAAACAAGTGACAAGAGTGAGTGGTGGAA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCGTCTCAGGACAAAGATaGGTCTCATTTCAAGGACTT +
Preference number: 3 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFVSGQR*VSFQGL
Trigger: AAGTCCTTGAAATGAGACCAATCTTTGTCCTGAGAC...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTACAAATGGGCATTGTTTaGCTTAACAGTTTTAGCTTC +
Preference number: 3 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLQMGIV*LNSFSF
Trigger: GAAGCTAAAACTGTTAAGCAAAACAATGCCCATTTG...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCATCTTACATGTCGCTaGTCTTTAAGTCTTCAATCC +
Preference number: 3 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFHLTCR*SLSLQS
Trigger: GGATTGAAGACTTAAAGACAAGCGACATGTAAGATG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCAAATGGGCATTGTTTaGCTTAACAGTTTTAGCTTC +
Preference number: 3 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIQMGIV*LNSFSF
Trigger: GAAGCTAAAACTGTTAAGCAAAACAATGCCCATTTG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR TCA 72 bp GATTCAGAACAAATAACTTCCTATTCTGGTATCCCTTaGAATCTAGCACCAGTTTCTTCATCATTTGCTACA +
Preference number: 3 (lower is better)
Translates to: DSEQITSYSGIP*NLAPVSSSFAT
Trigger: TGTAGCAAATGATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAGGCGGCGCGTCACTaGTGGGGTGGGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRQAARH*WGGRGR
Trigger: CCGGCCTCTCCCACCCCAGCAGTGACGCGCCGCCTG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342193.8
ENST00000375458.6
CDS-3UTR GCA 90 bp CAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACAGCCCGGCCCGCGCTCTTaGCGCTCGGCTCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QMSMMLWLPQVSQGTQRQPGPRS*RSALKP
Trigger: TGGCTTGAGAGCCGAGCGGCAAGAGCGCGGGCCGGG...CTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCGTCACTGCTGGGGTaGGAGAGGCCGGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRASLLG*ERPAGQ
Trigger: CTGACCCGCCGGCCTCTCCCACCCCAGCAGTGACGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342193.8
ENST00000375458.6
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCGGAGCGAAGCTGGCTaGGCGTCAAGAGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFARSEAG*ASRARP
Trigger: CGGGCGGGCTCTTGACGCTCAGCCAGCTTCGCTCCG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342193.8
ENST00000375458.6
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCCCGGCCCGCGCTCTTaGCGCTCGGCTCTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAPGPRS*RSALKP
Trigger: TGGCTTGAGAGCCGAGCGGCAAGAGCGCGGGCCGGG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCTCGCCGCCGCCTCTaGAGCACGGCCGCACATAAG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRARRRL*STAAHK
Trigger: CTTATGTGCGGCCGTGCTGCAGAGGCGGCGGCGAGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409184.8
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACCTGCCCCATTTCCCTaGCCGGAGTCCGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRPAPFP*PESGSS
Trigger: CGAGCTCCCGGACTCCGGGCAGGGAAATGGGGCAGG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409184.8
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATGGTTTTCTCCTGGCTaGGGCGTCCTGCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRWFSPG*GVLRAR
Trigger: CCGCGCCCGCAGGACGCCCCAGCCAGGAGAAAACCA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGAACGGGGCGGGGGTaGGCCGGGAGCAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGTGRG*AGSKLE
Trigger: TTCCAACTTGCTCCCGGCCCACCCCCGCCCCGTTCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409184.8
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCGGCGCGTCACTGCCTaGCCCATTTCCCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFARRVTA*PISLPG
Trigger: TCCGGGCAGGGAAATGGGGCAGGCAGTGACGCGCCG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409184.8
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAGGCCGGAGCGAAGCTaGCTGAGCGTCAAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRRPERS*LSVKSP
Trigger: CGGGCTCTTGACGCTCAGCCAGCTTCGCTCCGGCCT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342193.8
ENST00000375458.6
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGAGCCCGCCTCTTCTTaGGTGCATCCGACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSREPASS*VHPTAG
Trigger: CCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATGGCATCGGGGGCAGTaGAGCCCGCCTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRWHRGQ*SPPLLG
Trigger: CCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
3UTR CAA 72 bp GGGGCCTGGCTCTTAGGTGATCTAGGCTGGCCTCAGTaGGGAGCTCTGCTCCCTGCATCTCTCATCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GAWLLGDLGWPQ*GALLPASLILF
Trigger: GAAAAGGATGAGAGATGCAGGGAGCAGAGCTCCCAACTGAGGCCAGCCTAGATCACCTAAGAGCCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCTTGGGGGACACTCTaGGATGCTGGCATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSWGTL*DAGIGG
Trigger: GCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCAGGCGGCGCGTCACTaGTGGGGTGGGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFQAARH*WGGRGR
Trigger: CCGGCCTCTCCCACCCCAGCAGTGACGCGCCGCCTG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375458.6
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGGGACACTCTGAGATaGTGGCATCGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGDTLR*WHRGQW
Trigger: CCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAGCCCGCCTCTTCTTaGGTGCATCCGACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAEPASS*VHPTAG
Trigger: CCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAGAGCCCGCCTCTTCTTaGGTGCATCCGACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LIPDVNDVMAASGVPGHSEPASS*VHPTAG
Trigger: CCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTC...TGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTGGCATCGGGGGCAGTaGAGCCCGCCTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAWHRGQ*SPPLLG
Trigger: CCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGATGGCATCGGGGGCAGTaGAGCCCGCCTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FQMSMMLWLPQVSQGTQRWHRGQ*SPPLLG
Trigger: CCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCA...TCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTCTTGGGGGACACTCTaGGATGCTGGCATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASWGTL*DAGIGG
Trigger: GCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCTGCTGAGCTGCAGTaGACCTGCCCTCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRAAELQ*TCPHSS
Trigger: GGAAGAGTGAGGGCAGGTTCACTGCAGCTCAGCAGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACCGCCTCTTCTTGGGTaGATCCGACGGCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRPPLLG*IRRQGV
Trigger: AACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp CAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACAGCCGCCTCTTCTTGGGTaGATCCGACGGCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: QMSMMLWLPQVSQGTQRQPPLLG*IRRQGV
Trigger: AACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGG...CTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGGGACACTCTGAGATaGTGGCATCGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGDTLR*WHRGQW
Trigger: CCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGAAAGCCTTTCCTCCATCAGTTTaGGCGCAGTGCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRFPPSVWAQCTAPDWKAFPPSV*AQCTAP
Trigger: AGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAA...GGCTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTACGGCCGCACATAAGTaGGGACCAGCTCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFATAAHK*GPARRH
Trigger: ATGCCGCCGAGCTGGTCCCCACTTATGTGCGGCCGT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409184.8
CDS-3UTR TCA 90 bp CAAAGACAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGATAGGGGCAAGCTCTTaGAGCGATGCATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: QRQRFPPSVWAQCTAPDWIGASS*SDACGL
Trigger: GAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTAT...CCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTGTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp TTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAGGGGACACTCTGAGATaGTGGCATCGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LFQMSMMLWLPQVSQGTQGDTLR*WHRGQW
Trigger: CCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCC...TTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTGGTTTTCTCCTGGCTaGGGCGTCCTGCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFWFSPG*GVLRAR
Trigger: CCGCGCCCGCAGGACGCCCCAGCCAGGAGAAAACCA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGAGCCCGCCTCTTCTTaGGTGCATCCGACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQEPASS*VHPTAG
Trigger: CCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGACACTCTGAGATGCTaGCATCGGGGGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFADTLRC*HRGQWS
Trigger: GCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACATGGCATCATCAGGTaGGCTCACAGAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRHGIIR*AHRTGH
Trigger: GTGCCCAGTTCTGTGAGCTCACCTGATGATGCCATG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATGGGAGAGGGGGCTCTaGCTCTTTAATGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRWERGL*LFNERS
Trigger: GCTCCTCTCATTAAAGAGGCAGAGCCCCCTCTCCCA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTCAGTTGGGAGCTCTaGTCCCTGCATCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLSWEL*SLHLSS
Trigger: GGATGAGAGATGCAGGGAGCAGAGCTCCCAACTGAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGAAAGCCGGGGCACTTGCAGTTTaGTCTCGCTTTTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: QRFPPSVWAQCTAPDWKAGALAV*SRFFLL
Trigger: CAGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCCC...GGCTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGAGCCCGCCTCTTCTTaGGTGCATCCGACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAEPASS*VHPTAG
Trigger: CCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGAAGCAGGCCTCTCCTaGATGTGTGCAAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSREAGLS*MCARSW
Trigger: CCAAGACCTTGCACACATCCAGGAGAGGCCTGCTTC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGAGCTGGGTTTGGCCTaGGCATTTGAAGCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRELGLA*AFEARD
Trigger: ATCTCGGGCTTCAAATGCCCAGGCCAAACCCAGCTC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCAAAACCTGCTCCTATaGGTGGGAGAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAQNLLL*VGEGAL
Trigger: CAGAGCCCCCTCTCCCACCCATAGGAGCAGGTTTTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATAGGGGCAAGCTCTTaGAGCGATGCATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRIGASS*SDACGL
Trigger: GAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGAAAGCCTGTCCTTCTCAAAGATaGATTCCCTGCAGACATGCT +
Preference number: 4 (lower is better)
Translates to: QRFPPSVWAQCTAPDWKACPSQR*IPCRHA
Trigger: AGCATGTCTGCAGGGAATTCATCTTTGAGAAGGACA...GGCTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCTGGAAAGCCCAGGGTaGAAGGTTTCTGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALESPG*KVSGLD
Trigger: ATCCAGCCCAGAAACCTTTCACCCTGGGCTTTCCAG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCATGGCATCATCAGGTaGGCTCACAGAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAHGIIR*AHRTGH
Trigger: GTGCCCAGTTCTGTGAGCTCACCTGATGATGCCATG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCTTCAGCAGGAGCCTaGCCGATGACATCATCATCA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRASAGA*PMTSSS
Trigger: TGATGATGATGTCATCGGTCAGGCTCCTGCTGAAGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTGCACTGGCACTAGGTaGCTCGGTGCGCTCTTTACT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFACTGTR*LGALFT
Trigger: AGTAAAGAGCGCACCGAGTCACCTAGTGCCAGTGCA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGGGGACACTCTGAGATaGTGGCATCGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFGDTLR*WHRGQW
Trigger: CCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCCTCTCCTGGATGTGTaGAAGGTCTTGGGGGACACT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAPLLDV*KVLGDT
Trigger: AGTGTCCCCCAAGACCTTGCACACATCCAGGAGAGG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGAGGGTGGGGAAGGTaGTTTTCGCTTTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGGWGR*FSLCPS
Trigger: AGAAGGACAAAGCGAAAAGCACCTTCCCCACCCTCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCAGTTTGGGCGCAGTaGACTGCTCCTGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSVWAQ*TAPDWK
Trigger: TTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTCTCCCGAACGGATTaGAGTCAGCAAACTCTGTCG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLSRTD*SQQTLS
Trigger: CGACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGACACTCTGAGATGCTaGCATCGGGGGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQDTLRC*HRGQWS
Trigger: GCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAAGCAGGCCTCTCCTaGATGTGTGCAAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAEAGLS*MCARSW
Trigger: CCAAGACCTTGCACACATCCAGGAGAGGCCTGCTTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAGCTGGGTTTGGCCTaGGCATTTGAAGCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAELGLA*AFEARD
Trigger: ATCTCGGGCTTCAAATGCCCAGGCCAAACCCAGCTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGTGTTGGCTGGAGGTTaGACCAATGCACTGGCACTA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRVLAGG*TNALAL
Trigger: TAGTGCCAGTGCATTGGTCCAACCTCCAGCCAACAC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCCCTTCCTCTGTGTTaGCTGGAGGTTGGACCAATG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSLPLC*LEVGPM
Trigger: CATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp GACAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGAAAGAAATGTTTCCTGGGCTaGATAGCTCCTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: DRGFLHQFGRSALLLTGKKCFLG*IAPQES
Trigger: ACTCTCCTGAGGAGCTATCCAGCCCAGGAAACATTT...CTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCGGAGCGAAGCTGGCTaGGCGTCAAGAGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIRSEAG*ASRARP
Trigger: CGGGCGGGCTCTTGACGCTCAGCCAGCTTCGCTCCG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375458.6
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAGGAGAGTTTGCTTCTaGAGCACTGTCTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRRRVCF*STVWRN
Trigger: GTTCCTCCAGACAGTGCTTCAGAAGCAAACTCTCCT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTGGATGTGGGACTCTaGGACTCCTCTGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALDVGL*DSSASV
Trigger: CACAGAAGCAGAGGAGTCTCAGAGTCCCACATCCAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAACCTCTCCTGGATGTGTaGAAGGTCTTGGGGGACACT +
Preference number: 4 (lower is better)
Translates to: LFQMSMMLWLPQVSQGTQPLLDV*KVLGDT
Trigger: AGTGTCCCCCAAGACCTTGCACACATCCAGGAGAGG...TTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGAGGGTGGGGAAGGTaGTTTTCGCTTTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGGWGR*FSLCPS
Trigger: AGAAGGACAAAGCGAAAAGCACCTTCCCCACCCTCC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp CAGTGCACTGCTCCTGACTGGAAAGCCCAGGGTGAAAGGTTTCACTTAAAGATGGGAGGGTGGGGAAGGTaGTTTTCGCTTTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QCTAPDWKAQGERFHLKMGGWGR*FSLCPS
Trigger: AGAAGGACAAAGCGAAAAGCACCTTCCCCACCCTCC...CATCTTTAAGTGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAACTCTCCACTACCATTaGCAAGGGCTGAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRTLHYH*QGLSQD
Trigger: ATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAAGGGAGAAAGAGTCTaGTCCGGAGAAGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRKGERV*SGEGSI
Trigger: TATGCTGCCTTCTCCGGAGCAGACTCTTTCTCCCTT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCGCGTCACTGCTGGGGTaGGAGAGGCCGGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIASLLG*ERPAGQ
Trigger: CTGACCCGCCGGCCTCTCCCACCCCAGCAGTGACGC...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375458.6
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGAGGAAGTGGTGCCTTaGCTTTTGGTTTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSREEVVP*LLVFSW
Trigger: CCAGGAGAAAACCAAAAGCCAAGGCACCACTTCCTC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTCAGCTGGAGGAAGTaGTGCCTTGGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLSWRK*CLGFWF
Trigger: AAACCAAAAGCCAAGGCACCACTTCCTCCAGCTGAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATATTTGGTCTCAGCTaGAGGAAGTGGTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRIFGLS*RKWCLG
Trigger: GCCAAGGCACCACTTCCTCCAGCTGAGACCAAATAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp TTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAGAAGCAGGCCTCTCCTaGATGTGTGCAAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LFQMSMMLWLPQVSQGTQEAGLS*MCARSW
Trigger: CCAAGACCTTGCACACATCCAGGAGAGGCCTGCTTC...TTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGGTATTTTGGAGGGTaGGGAAGGTGCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGYFGG*GRCFSL
Trigger: AAGCGAAAAGCACCTTCCCCACCCTCCAAAATACCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTTCCTCCATCAGTTTaGGCGCAGTGCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFPPSV*AQCTAP
Trigger: AGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGTGAGCTCACAGAACTaGGCACTTGATGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRVSSQN*ALDALF
Trigger: GAACAGAGCATCAAGTGCCCAGTTCTGTGAGCTCAC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAAAAAGAGCTGGGTTTaGCCTGGGCATTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRKKSWV*PGHLKP
Trigger: GGGCTTCAAATGCCCAGGCCAAACCCAGCTCTTTTT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAGCATGGACACTCTTaGCAGCTGCAGATGTCACAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRQHGHS*QLQMSH
Trigger: ATGTGACATCTGCAGCTGCCAAGAGTGTCCATGCTG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTCCTCTGTGTTGGCTaGAGGTTGGACCAATGCACT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFLCVG*RLDQCT
Trigger: AGTGCATTGGTCCAACCTCCAGCCAACACAGAGGAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTCCCTTCCTCTGTGTTaGCTGGAGGTTGGACCAATG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASLPLC*LEVGPM
Trigger: CATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCAGGGGACATGGAATaGCTGAGTCTTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSGDME*LSLDLP
Trigger: TGGAAGGTCAAGACTCAGCCATTCCATGTCCCCTGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTATTCCAGCTGGGCTaGATAGCTCCTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLFQLG*IAPQES
Trigger: ACTCTCCTGAGGAGCTATCCAGCCCAGCTGGAATAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAGGAGAGTTTGCTTCTaGAGCACTGTCTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFARRVCF*STVWRN
Trigger: GTTCCTCCAGACAGTGCTTCAGAAGCAAACTCTCCT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CTTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAGGAGAGTTTGCTTCTaGAGCACTGTCTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LIPDVNDVMAASGVPGHSRRVCF*STVWRN
Trigger: GTTCCTCCAGACAGTGCTTCAGAAGCAAACTCTCCT...TGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAACCATTGCCAAGGGCTaGGTCAGGATCATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRTIAKG*VRIIFQ
Trigger: CTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAACAGAACTGGGCACTTaGTGCTCTGTTCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRTELGT*CSVLRL
Trigger: TAACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACGGTGCGCTCTTTACTaGAAGACTGTGACCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRRCALY*KTVTFS
Trigger: TGAAAAGGTCACAGTCTTTCAGTAAAGAGCGCACCG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTACATGGGGGCATCGCTaGGGGAGAACTACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFTWGHR*GRTTKE
Trigger: CTCCTTGGTAGTTCTCCCTCAGCGATGCCCCCATGT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAGCTGGAGGAAGTGGTaGCTTGGCTTTTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSWRKW*LGFWFS
Trigger: AGAAAACCAAAAGCCAAGGCACCACTTCCTCCAGCT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAAGCTCTTGAAGCGATaGATGTGGACTCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRKLLKR*MWTHSH
Trigger: GTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAACCTCTCCTGGATGTGTaGAAGGTCTTGGGGGACACT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQPLLDV*KVLGDT
Trigger: AGTGTCCCCCAAGACCTTGCACACATCCAGGAGAGG...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTACTCTCCACTACCATTaGCAAGGGCTGAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFATLHYH*QGLSQD
Trigger: ATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp TTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGAACTCTCCACTACCATTaGCAAGGGCTGAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: FQMSMMLWLPQVSQGTQRTLHYH*QGLSQD
Trigger: ATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT...TCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGACACTCTTGGCAGCTaGAGATGTCACATAGTGACC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFADTLGS*RCHIVT
Trigger: GGTCACTATGTGACATCTGCAGCTGCCAAGAGTGTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAAGGGAGAAAGAGTCTaGTCCGGAGAAGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAKGERV*SGEGSI
Trigger: TATGCTGCCTTCTCCGGAGCAGACTCTTTCTCCCTT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAGGAAGTGGTGCCTTaGCTTTTGGTTTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAEEVVP*LLVFSW
Trigger: CCAGGAGAAAACCAAAAGCCAAGGCACCACTTCCTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCTCAGCTGGAGGAAGTaGTGCCTTGGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALSWRK*CLGFWF
Trigger: AAACCAAAAGCCAAGGCACCACTTCCTCCAGCTGAG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATATTTGGTCTCAGCTaGAGGAAGTGGTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAIFGLS*RKWCLG
Trigger: GCCAAGGCACCACTTCCTCCAGCTGAGACCAAATAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGGGCACTTGCAGTTTaGTCTCGCTTTTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGALAV*SRFFLL
Trigger: CAGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGGTATTTTGGAGGGTaGGGAAGGTGCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGYFGG*GRCFSL
Trigger: AAGCGAAAAGCACCTTCCCCACCCTCCAAAATACCC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAAAGGTTTCTGGGCTaGATAGCTCCTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAERFLG*IAPQES
Trigger: ACTCTCCTGAGGAGCTATCCAGCCCAGAAACCTTTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCTTCGGTTTAAGGTTTaGCAGTGGCTCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALRFKV*QWLFWA
Trigger: AGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAAAAAGAGCTGGGTTTaGCCTGGGCATTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAKKSWV*PGHLKP
Trigger: GGGCTTCAAATGCCCAGGCCAAACCCAGCTCTTTTT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCAGCATGGACACTCTTaGCAGCTGCAGATGTCACAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAQHGHS*QLQMSH
Trigger: ATGTGACATCTGCAGCTGCCAAGAGTGTCCATGCTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTCCTCTGTGTTGGCTaGAGGTTGGACCAATGCACT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFLCVG*RLDQCT
Trigger: AGTGCATTGGTCCAACCTCCAGCCAACACAGAGGAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTGTCGCATCTGTTCTaGGTCAGAGCTTTGGAATGT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLSHLF*VRALEC
Trigger: ACATTCCAAAGCTCTGACCCAGAACAGATGCGACAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTCAGGGGACATGGAATaGCTGAGTCTTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASGDME*LSLDLP
Trigger: TGGAAGGTCAAGACTCAGCCATTCCATGTCCCCTGA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGAAGTGAAGTGCAGTaGTGTGGCAGGGTAACATTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGSEVQ*CGRVTF
Trigger: AAATGTTACCCTGCCACACCACTGCACTTCACTTCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCGCAAGGCGTGGGCTaGAAACTAAGAATAAACTGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSQGVG*KLRINW
Trigger: CCAGTTTATTCTTAGTTTCCAGCCCACGCCTTGCGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGCAGGACTCTCTGTTaGCATCCATCGCATATAATT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGRTLC*HPSHII
Trigger: AATTATATGCGATGGATGTCAACAGAGAGTCCTGCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATCTTGGGGGACACTCTaGGATGCTGGCATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLSWGTL*DAGIGG
Trigger: GCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATGTCCTTCTCAAAGATaGATTCCCTGCAGACATGCT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRCPSQR*IPCRHA
Trigger: AGCATGTCTGCAGGGAATTCATCTTTGAGAAGGACA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTACCATTGCCAAGGGCTaGGTCAGGATCATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFATIAKG*VRIIFQ
Trigger: CTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATGTGCCTCAGAGTTTaGTGGTCTCTCAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRMCLRV*WSLNFH
Trigger: ATGGAAGTTGAGAGACCATCAAACTCTGAGGCACAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAGAAGGGGTTGTCTaGATTGCTGCATCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRQEGVV*IAASFV
Trigger: GACAAAAGATGCAGCAATTCAGACAACCCCTTCTTG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTACAGAACTGGGCACTTaGTGCTCTGTTCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFATELGT*CSVLRL
Trigger: TAACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACATGGCATCATCAGGTaGGCTCACAGAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAHGIIR*AHRTGH
Trigger: GTGCCCAGTTCTGTGAGCTCACCTGATGATGCCATG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGTTGTGGAACAGAGTaGGGCATTTTACTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGCGTE*GILLKG
Trigger: TCCCTTAAGTAAAATGCCTCACTCTGTTCCACAACC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGCTTCAGCAGGAGCCTaGCCGATGACATCATCATCA +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQASAGA*PMTSSS
Trigger: TGATGATGATGTCATCGGTCAGGCTCCTGCTGAAGC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCGGTGCGCTCTTTACTaGAAGACTGTGACCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFARCALY*KTVTFS
Trigger: TGAAAAGGTCACAGTCTTTCAGTAAAGAGCGCACCG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTGCCCAAGATCCCATaGCTCATAAGTGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALPKIP*LISGRL
Trigger: AAGTCTGCCACTTATGAGTCATGGGATCTTGGGCAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCAGTTCATGAAGAGGTaGAATCGGAAGAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAQFMKR*NRKKGH
Trigger: GTGACCCTTCTTCCGATTTCACCTCTTCATGAACTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAGCTGGAGGAAGTGGTaGCTTGGCTTTTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASWRKW*LGFWFS
Trigger: AGAAAACCAAAAGCCAAGGCACCACTTCCTCCAGCT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAAGCTCTTGAAGCGATaGATGTGGACTCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAKLLKR*MWTHSH
Trigger: GTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp CTTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGCTCTTGAAGCGATaGATGTGGACTCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: LIPDVNDVMAASGVPGHSKLLKR*MWTHSH
Trigger: GTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTT...TGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTACCGCCTCTTCTTGGGTaGATCCGACGGCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLPPLLG*IRRQGV
Trigger: AACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGG...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACCTCTCCTGGATGTGTaGAAGGTCTTGGGGGACACT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAPLLDV*KVLGDT
Trigger: AGTGTCCCCCAAGACCTTGCACACATCCAGGAGAGG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGTGCAAAAGGAGCTGTaGCAGTGTCTCTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRVQKEL*QCLLSF
Trigger: AAATGACAAGAGACACTGGCACAGCTCCTTTTGCAC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTGAAGCGATGCATGTaGACTCACTCTCACTATGGT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLKRCM*THSHYG
Trigger: ACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGGGCACTTGCAGTTTaGTCTCGCTTTTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGALAV*SRFFLL
Trigger: CAGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCCC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACCGACGGCAGGGTGTTaGAAATATATGGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRPTAGC*KYMVWK
Trigger: TTTCCAAACCATATATTTCCAACACCCTGCCGTCGG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTGGCATCGGGGGCAGTaGAGCCCGCCTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFWHRGQ*SPPLLG
Trigger: CCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGAAGCAGGCCTCTCCTaGATGTGTGCAAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFEAGLS*MCARSW
Trigger: CCAAGACCTTGCACACATCCAGGAGAGGCCTGCTTC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATGTCAATGATGTTATaGCTGCCTCAGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAMSMML*LPQVSQ
Trigger: CTGGGACACCTGAGGCAGCCATAACATCATTGACAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR CCA 90 bp TTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGAATGTCAATGATGTTATaGCTGCCTCAGGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FQMSMMLWLPQVSQGTQRMSMML*LPQVSQ
Trigger: CTGGGACACCTGAGGCAGCCATAACATCATTGACAT...TCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTTAAGGTTTGGCAGTaGCTCTTCTGGGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFKVWQ*LFWAFR
Trigger: TCTGAAAGCCCAGAAGAGCCACTGCCAAACCTTAAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATTTGTCAGTTCTTTTaGAGCAGGATTAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRICQFF*SRIRGS
Trigger: GCTGCCCCTAATCCTGCTCCAAAAGAACTGACAAAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCTGTCGCATCTGTTCTaGGTCAGAGCTTTGGAATGT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALSHLF*VRALEC
Trigger: ACATTCCAAAGCTCTGACCCAGAACAGATGCGACAG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCATCTGTGAGATTCTaGAGGAAACAGCGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSSVRF*RKQRCG
Trigger: TCCACAACGCTGTTTCCTCCAGAATCTCACAGATGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACAGGCGGCGCGTCACTaGTTCTTTTCCAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAQAARH*FFSKGD
Trigger: GTCTCCTTTGGAAAAGAACCAGTGACGCGCCGCCTG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652658.2
3UTR CAA 72 bp CACAAACCTTGGTGGTATTGCTGGGGTAAGCATTTATaGCTTACACATCAGAGTAAACTGGGGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HKPWWYCWGKHL*LTHQSKLGAWL
Trigger: GAGCCAGGCCCCCAGTTTACTCTGATGTGTAAGCAATAAATGCTTACCCCAGCAATACCACCAAGGTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CAAAGACAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGCTTGATGGATTTAAGTaGTACTGTGCACAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: QRQRFPPSVWAQCTAPDWLDGFK*YCAQRN
Trigger: ATTCCTTTGTGCACAGTATCACTTAAATCCATCAAG...CCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTGTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGTGGTTCTGTTCAGCTaGCAACAGATCGATTGTGTA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAVVLFS*QQIDCV
Trigger: TACACAATCGATCTGTTGTCAGCTGAACAGAACCAC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTATAGGGGCAAGCTCTTaGAGCGATGCATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFIGASS*SDACGL
Trigger: GAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTAT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAATAGGGGCAAGCTCTTaGAGCGATGCATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAIGASS*SDACGL
Trigger: GAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTAT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGCAGGACTCTCTGTTaGCATCCATCGCATATAATT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGRTLC*HPSHII
Trigger: AATTATATGCGATGGATGTCAACAGAGAGTCCTGCC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTCTTGGGGGACACTCTaGGATGCTGGCATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFISWGTL*DAGIGG
Trigger: GCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGATCTTGGGGGACACTCTaGGATGCTGGCATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRSWGTL*DAGIGG
Trigger: GCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGA...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTGTCCTTCTCAAAGATaGATTCCCTGCAGACATGCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFACPSQR*IPCRHA
Trigger: AGCATGTCTGCAGGGAATTCATCTTTGAGAAGGACA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTATTCCAGATGTCAATaGTGTTATGGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAYSRCQ*CYGCLR
Trigger: CCTGAGGCAGCCATAACATCATTGACATCTGGAATA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR TCA 90 bp CTTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCATATTCCAGATGTCAATaGTGTTATGGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LIPDVNDVMAASGVPGHSYSRCQ*CYGCLR
Trigger: CCTGAGGCAGCCATAACATCATTGACATCTGGAATA...TGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTCCATGGAGTTTTGTaGGAACTCTCCACTACCATT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFHGVL*ELSTTI
Trigger: AATGGTAGTGGAGAGTTCTCACAAAACTCCATGGAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACAGAGGTTTCCTTCCATGGAGTTTTGTaGGAACTCTCCACTACCATT +
Preference number: 4 (lower is better)
Translates to: NDVMAASGVPGHSKTEVSFHGVL*ELSTTI
Trigger: AATGGTAGTGGAGAGTTCTCACAAAACTCCATGGAA...GGAAACCTCTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATGTGCCTCAGAGTTTaGTGGTCTCTCAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAMCLRV*WSLNFH
Trigger: ATGGAAGTTGAGAGACCATCAAACTCTGAGGCACAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCAAGAAGGGGTTGTCTaGATTGCTGCATCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAQEGVV*IAASFV
Trigger: GACAAAAGATGCAGCAATTCAGACAACCCCTTCTTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATAATTAGGGTGCCTTaGCTCCTGAATTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAIIRVP*LLNSLE
Trigger: CTCAAGGGAATTCAGGAGTCAAGGCACCCTAATTAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTTGGCCTGGGCATTTaGAGCCCGAGATTTAAATTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFGLGI*SPRFKF
Trigger: AAATTTAAATCTCGGGCTTCAAATGCCCAGGCCAAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGTTGTGGAACAGAGTaGGGCATTTTACTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGCGTE*GILLKG
Trigger: TCCCTTAAGTAAAATGCCTCACTCTGTTCCACAACC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTTTGTGTGGATACCTaGCTAGCAGGAATTGTCACA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFCVDT*LAGIVT
Trigger: TGTGACAATTCCTGCTAGTCAGGTATCCACACAAAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTCTCATAACAGTGAATaGTGGGCCATCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASHNSE*WAISWS
Trigger: ACTCCAACTGATGGCCCATCATTCACTGTTATGAGA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGGCAGACTTGTGATCTaGACCCCAATCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQGRLVI*TPISSL
Trigger: GAGTGAAGAGATTGGGGTTCAGATCACAAGTCTGCC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAGATCTGGCAGTTCATaGAGAGGTGAAATCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFARSGSS*RGEIGR
Trigger: TCTTCCGATTTCACCTCTTCATGAACTGCCAGATCT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCTAGACAGAAAGTCTaGGGTGTATTTGTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRARQKV*GVFVLD
Trigger: ATCCAACACAAATACACCTCAGACTTTCTGTCTAGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTACGCCTCTTGGTTTCTTaGCTTAGGGAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLRLLVS*LRESWA
Trigger: GGCCCAGGACTCCCTAAGTCAAGAAACCAAGAGGCG...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATATTTTCTGATCCCTTaGAGGTATCCAAAACCCACC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRYFLIP*RYPKPT
Trigger: GGTGGGTTTTGGATACCTTCAAGGGATCAGAAAATA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGGAGGGTGGGGAAGGTaGTTTTCGCTTTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAGGWGR*FSLCPS
Trigger: AGAAGGACAAAGCGAAAAGCACCTTCCCCACCCTCC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGTGCAAAAGGAGCTGTaGCAGTGTCTCTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAVQKEL*QCLLSF
Trigger: AAATGACAAGAGACACTGGCACAGCTCCTTTTGCAC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGAGTGTGTATGCTGTTaGCAGTGCCTAGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAECVCC*QCLVAK
Trigger: CTTGGCCACTAGGCACTGGCAACAGCATACACACTC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGGGAGCTCTGCTCCCTaGATCTCTCATCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQGSSAP*ISHPFL
Trigger: AAGAAAAGGATGAGAGATGCAGGGAGCAGAGCTCCC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTGAAGCGATGCATGTaGACTCACTCTCACTATGGT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALKRCM*THSHYG
Trigger: ACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCCGACGGCAGGGTGTTaGAAATATATGGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAPTAGC*KYMVWK
Trigger: TTTCCAAACCATATATTTCCAACACCCTGCCGTCGG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CAGTGCACTGCTCCTGACTGGAAAGCCCAGGGTGAAAGGTTTCACTTAAAGATGCCGACGGCAGGGTGTTaGAAATATATGGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: QCTAPDWKAQGERFHLKMPTAGC*KYMVWK
Trigger: TTTCCAAACCATATATTTCCAACACCCTGCCGTCGG...CATCTTTAAGTGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAACATTCTCTTGGTTTaGGCCCAACGACTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRNILLV*AQRLQV
Trigger: AACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAACCATGTGCACAAATTaGATCTTTTACGGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRTMCTN*IFYGKR
Trigger: CCGCTTACCGTAAAAGATCCAATTTGTGCACATGGT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTTAAGGTTTGGCAGTaGCTCTTCTGGGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFKVWQ*LFWAFR
Trigger: TCTGAAAGCCCAGAAGAGCCACTGCCAAACCTTAAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGTGAGCTCACAGAACTaGGCACTTGATGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQVSSQN*ALDALF
Trigger: GAACAGAGCATCAAGTGCCCAGTTCTGTGAGCTCAC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTGTCTCTTGTCATTTTaGGAGCAGGTTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFACLLSF*EQVSED
Trigger: GTCCTCTGAAACCTGCTCCCAAAATGACAAGAGACA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATTTGTCAGTTCTTTTaGAGCAGGATTAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAICQFF*SRIRGS
Trigger: GCTGCCCCTAATCCTGCTCCAAAAGAACTGACAAAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTCAACAAGGGGTTGTaGAACAGAGTGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFNKGL*NRVRHF
Trigger: AAAATGCCTCACTCTGTTCCACAACCCCTTGTTGAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGTGTTGGCTGGAGGTTaGACCAATGCACTGGCACTA +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFVLAGG*TNALAL
Trigger: TAGTGCCAGTGCATTGGTCCAACCTCCAGCCAACAC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGTGTTGGCTGGAGGTTaGACCAATGCACTGGCACTA +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAVLAGG*TNALAL
Trigger: TAGTGCCAGTGCATTGGTCCAACCTCCAGCCAACAC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTCCCTTCCTCTGTGTTaGCTGGAGGTTGGACCAATG +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFSLPLC*LEVGPM
Trigger: CATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCCATCAGTTGGAGTTaGTATTTGGGAATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRAISWS*YLGILF
Trigger: GAACAGAATTCCCAAATACCAACTCCAACTGATGGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATCAGGGGACATGGAATaGCTGAGTCTTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQSGDME*LSLDLP
Trigger: TGGAAGGTCAAGACTCAGCCATTCCATGTCCCCTGA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATACATTCTCTTGGTTTaGGCCCAACGACTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRYILLV*AQRLQV
Trigger: AACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTAGACCATGCATTTTaGAGTCAGAATGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALDHAF*SQNARA
Trigger: AGCCCTGGCATTCTGACTCCAAAATGCATGGTCTAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATTAACAGCTATCTTTaGAGAGGAGAGTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRINSYL*RGEWDA
Trigger: AGCATCCCACTCTCCTCTCCAAAGATAGCTGTTAAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATTAGTAATTGGATGTaGGACTCTGAGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRISNWM*DSETPL
Trigger: CAGAGGAGTCTCAGAGTCCCACATCCAATTACTAAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACTCTCCACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTACAGGCGGCGCGTCACTaGTTCTTTTCCAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: TLHYHCQGLSQDHFSVYLQAARH*FFSKGD
Trigger: GTCTCCTTTGGAAAAGAACCAGTGACGCGCCGCCTG...TAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp AAAGACAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGATACAGAATCAGCAGCTaGAGAGACATCAGTATATTT +
Preference number: 4 (lower is better)
Translates to: KDRGFLHQFGRSALLLTGYRISS*RDISIF
Trigger: AAATATACTGATGTCTCTTCAGCTGCTGATTCTGTA...TCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCGCTGCTGAGCTGCAGTaGACCTGCCCTCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIAAELQ*TCPHSS
Trigger: GGAAGAGTGAGGGCAGGTTCACTGCAGCTCAGCAGC...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGAGCTGCTGAGCTGCAGTaGACCTGCCCTCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRAAELQ*TCPHSS
Trigger: GGAAGAGTGAGGGCAGGTTCACTGCAGCTCAGCAGC...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAAGGAGAGTTTGCTTCTaGAGCACTGTCTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIARRVCF*STVWRN
Trigger: GTTCCTCCAGACAGTGCTTCAGAAGCAAACTCTCCT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAACTCCTGAATTCCCTTaGGGTATTTACAGAATCTTG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRTPEFP*GIYRIL
Trigger: CAAGATTCTGTAAATACCTCAAGGGAATTCAGGAGT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTTGGCCTGGGCATTTaGAGCCCGAGATTTAAATTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFGLGI*SPRFKF
Trigger: AAATTTAAATCTCGGGCTTCAAATGCCCAGGCCAAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTTACTGAAAGACTGTaGCCTTTTCACTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFTERL*PFHYSK
Trigger: CTTGCTGTAGTGAAAAGGTCACAGTCTTTCAGTAAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAACGGTGCGCTCTTTACTaGAAGACTGTGACCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQRCALY*KTVTFS
Trigger: TGAAAAGGTCACAGTCTTTCAGTAAAGAGCGCACCG...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGGCAGACTTGTGATCTaGACCCCAATCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAGRLVI*TPISSL
Trigger: GAGTGAAGAGATTGGGGTTCAGATCACAAGTCTGCC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAGGACTTGGATAAGATaGCAGAGTGTGTATGCTGTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFARTWIR*QSVYAV
Trigger: AACAGCATACACACTCTGTCATCTTATCCAAGTCCT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATATTCTGGTATCCCTTaGAATCTAGCACCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRYSGIP*NLAPVS
Trigger: AGAAACTGGTGCTAGATTTCAAGGGATACCAGAATA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAAGAGAGGGAAAGAACTaGGGCCATCACTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAREGKN*GHHCYH
Trigger: GTGATAGCAGTGATGGCCTCAGTTCTTTCCCTCTCT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGCAAGCAGAAACACATaGACCTTTGAGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAASRNT*TFEGWS
Trigger: AGACCAGCCCTCAAAGGTTCATGTGTTTCTGCTTGC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAAAGCTCTTGAAGCGATaGATGTGGACTCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQKLLKR*MWTHSH
Trigger: GTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCCGCCTCTTCTTGGGTaGATCCGACGGCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIPPLLG*IRRQGV
Trigger: AACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACTCTCCACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTATCAGTTTGGGCGCAGTaGACTGCTCCTGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: TLHYHCQGLSQDHFSVYLSVWAQ*TAPDWK
Trigger: TTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGA...TAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGACACTCTTGGCAGCTaGAGATGTCACATAGTGACC +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFDTLGS*RCHIVT
Trigger: GGTCACTATGTGACATCTGCAGCTGCCAAGAGTGTC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAGCATATCCCTTTCTaGCTCTTTATTTGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRQHIPF*LFICQF
Trigger: GAACTGACAAATAAAGAGGCAGAAAGGGATATGCTG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGTATGCTGTTGCCAGTaGCTAGTGGCCAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPVCCCQ*LVAKAR
Trigger: TCTGGCCTTGGCCACTAGGCACTGGCAACAGCATAC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATTGAGGCCATCACTATaGCTATCGCTATCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIALRPSL*LSLSQG
Trigger: GCCTTGCGATAGCGATAGGCATAGTGATGGCCTCAA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTACTCAGTTGGGAGCTCTaGTCCCTGCATCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLSWEL*SLHLSS
Trigger: GGATGAGAGATGCAGGGAGCAGAGCTCCCAACTGAG...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAGGTTTTGTGATATTTaGCAGGACTCTCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRRFCDI*QDSLLT
Trigger: TGTCAACAGAGAGTCCTGCCAAATATCACAAAACCT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTATTATATGACACTCTGAGATGCTaGCATCGGGGGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HYHCQGLSQDHFSVYLLYDTLRC*HRGQWS
Trigger: GCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTC...ATATAATAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCGACACTCTGAGATGCTaGCATCGGGGGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFDTLRC*HRGQWS
Trigger: GCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTC...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATATACTACACTGTGTaGTTCTTGTCCATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRIYYTV*FLSICA
Trigger: AGCACAGATGGACAAGAACCACACAGTGTAGTATAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTACCATGTGCACAAATTaGATCTTTTACGGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFATMCTN*IFYGKR
Trigger: CCGCTTACCGTAAAAGATCCAATTTGTGCACATGGT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTGAAGGTTTTGGCTTaGGATTGTAGTCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLKVLA*DCSPVY
Trigger: ATAGACAGGACTACAATCCCAAGCCAAAACCTTCAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACTTCGGTTTAAGGTTTaGCAGTGGCTCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIALRFKV*QWLFWA
Trigger: AGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCTTCGGTTTAAGGTTTaGCAGTGGCTCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFLRFKV*QWLFWA
Trigger: AGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATATTTCTTCCAAATTTaGTGCAAAAGGAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRYFFQI*CKRSCA
Trigger: GGCACAGCTCCTTTTGCACCAAATTTGGAAGAAATA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAAAAAAGAGCTGGGTTTaGCCTGGGCATTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAKKSWV*PGHLKP
Trigger: GGGCTTCAAATGCCCAGGCCAAACCCAGCTCTTTTT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCAGCATGGACACTCTTaGCAGCTGCAGATGTCACAT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFQHGHS*QLQMSH
Trigger: ATGTGACATCTGCAGCTGCCAAGAGTGTCCATGCTG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTCAACAAGGGGTTGTaGAACAGAGTGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFNKGL*NRVRHF
Trigger: AAAATGCCTCACTCTGTTCCACAACCCCTTGTTGAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAGACACACCAAGCTGTaGGATGTCCACAAATTTATT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRRHTKL*DVHKFI
Trigger: AATAAATTTGTGGACATCCCACAGCTTGGTGTGTCT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGCCATCAGTTGGAGTTaGTATTTGGGAATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAAISWS*YLGILF
Trigger: GAACAGAATTCCCAAATACCAACTCCAACTGATGGC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAACTGTCGCATCTGTTCTaGGTCAGAGCTTTGGAATGT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQLSHLF*VRALEC
Trigger: ACATTCCAAAGCTCTGACCCAGAACAGATGCGACAG...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGGAAGTGAAGTGCAGTaGTGTGGCAGGGTAACATTT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQGSEVQ*CGRVTF
Trigger: AAATGTTACCCTGCCACACCACTGCACTTCACTTCC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATTAACAGCTATCTTTaGAGAGGAGAGTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAINSYL*RGEWDA
Trigger: AGCATCCCACTCTCCTCTCCAAAGATAGCTGTTAAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTTCCAGAACACTGCTaGTATAAAAGGCAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLPEHC*YKRQVV
Trigger: AACAACTTGCCTTTTATACCAGCAGTGTTCTGGAAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATTAGTAATTGGATGTaGGACTCTGAGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAISNWM*DSETPL
Trigger: CAGAGGAGTCTCAGAGTCCCACATCCAATTACTAAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTACAAAACCTGCTCCTATaGGTGGGAGAGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLQNLLL*VGEGAL
Trigger: CAGAGCCCCCTCTCCCACCCATAGGAGCAGGTTTTG...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTGCTTTTAACTGGTTaGGAGCTAGACAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLLLTG*ELDRKS
Trigger: AGACTTTCTGTCTAGCTCCCAACCAGTTAAAAGCAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATACAGAATCAGCAGCTaGAGAGACATCAGTATATTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRYRISS*RDISIF
Trigger: AAATATACTGATGTCTCTTCAGCTGCTGATTCTGTA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTTGATGGATTTAAGTaGTACTGTGCACAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLDGFK*YCAQRN
Trigger: ATTCCTTTGTGCACAGTATCACTTAAATCCATCAAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGGCAGGACTCTCTGTTaGCATCCATCGCATATAATT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQGRTLC*HPSHII
Trigger: AATTATATGCGATGGATGTCAACAGAGAGTCCTGCC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAATGTGCCTCAGAGTTTaGTGGTCTCTCAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQMCLRV*WSLNFH
Trigger: ATGGAAGTTGAGAGACCATCAAACTCTGAGGCACAT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGAGTCAGATAAATTATaGTCTTGGTGTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRESDKL*SWCFPS
Trigger: TGATGGGAAACACCAAGATCATAATTTATCTGACTC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTACTCCTGAATTCCCTTaGGGTATTTACAGAATCTTG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFATPEFP*GIYRIL
Trigger: CAAGATTCTGTAAATACCTCAAGGGAATTCAGGAGT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATACTCTATGGTTTCTaGTTGCCAGTCTTTCGATAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRILYGF*LPVFRY
Trigger: ATATCGAAAGACTGGCAATCAGAAACCATAGAGTAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAAAGCATGCATGTCCTaGTCATCTTTATACTCTATG +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRKACMS*SSLYSM
Trigger: CATAGAGTATAAAGATGATCAGGACATGCATGCTTT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCTTTCACATTCTCATaGGTGTGCTTTTTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSFTFS*VCFFPK
Trigger: TTTAGGGAAAAAGCACACTCATGAGAATGTGAAAGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGCTTCAGCAGGAGCCTaGCCGATGACATCATCATCA +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPASAGA*PMTSSS
Trigger: TGATGATGATGTCATCGGTCAGGCTCCTGCTGAAGC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTTACTGAAAGACTGTaGCCTTTTCACTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFTERL*PFHYSK
Trigger: CTTGCTGTAGTGAAAAGGTCACAGTCTTTCAGTAAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAATGTTCCATTAGTATaGAGTTGGTCTGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRNVPLV*SWSEVE
Trigger: TTCCACTTCAGACCAACTTCATACTAATGGAACATT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATTGCCCAAGATCCCATaGCTCATAAGTGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIALPKIP*LISGRL
Trigger: AAGTCTGCCACTTATGAGTCATGGGATCTTGGGCAA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTATTCTGGTATCCCTTaGAATCTAGCACCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAYSGIP*NLAPVS
Trigger: AGAAACTGGTGCTAGATTTCAAGGGATACCAGAATA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCTTTCAGGTTTTCAATaGAATAGCACAGTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALSGFQ*NSTVAR
Trigger: TCTGGCAACTGTGCTATTTCATTGAAAACCTGAAAG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCGCCTCTTGGTTTCTTaGCTTAGGGAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIRLLVS*LRESWA
Trigger: GGCCCAGGACTCCCTAAGTCAAGAAACCAAGAGGCG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCACATGGGGGCATCGCTaGGGGAGAACTACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFTWGHR*GRTTKE
Trigger: CTCCTTGGTAGTTCTCCCTCAGCGATGCCCCCATGT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTATTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAACAGAAGTGGCTCTGTTaGCATCCATCGCATATAATT +
Preference number: 4 (lower is better)
Translates to: LFQMSMMLWLPQVSQGTQQKWLC*HPSHII
Trigger: AATTATATGCGATGGATGTCAACAGAGCCACTTCTG...TTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTAGCTGGAGGAAGTGGTaGCTTGGCTTTTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFSWRKW*LGFWFS
Trigger: AGAAAACCAAAAGCCAAGGCACCACTTCCTCCAGCT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAAAGCTCTTGAAGCGATaGATGTGGACTCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAKLLKR*MWTHSH
Trigger: GTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGGAGGGTGGGGAAGGTaGTTTTCGCTTTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPGGWGR*FSLCPS
Trigger: AGAAGGACAAAGCGAAAAGCACCTTCCCCACCCTCC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCTATGGTTTCTGATTaGCAGTCTTTCGATATTTCC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSMVSD*QSFDIS
Trigger: GGAAATATCGAAAGACTGGCAATCAGAAACCATAGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCAGCATATCCCTTTCTaGCTCTTTATTTGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAQHIPF*LFICQF
Trigger: GAACTGACAAATAAAGAGGCAGAAAGGGATATGCTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTACTCTCCCGAACGGATTaGAGTCAGCAAACTCTGTCG +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLSRTD*SQQTLS
Trigger: CGACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAG...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCAGATGTCTCCTTATaGATGTGCATAAGTACTTAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRADVSL*MCISTY
Trigger: ATAAGTACTTATGCACATGCATAAGGAGACATCTGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATAGAGAAAGTAATTTaGCCAAGATCCCATGACTCA +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRIEKVI*PRSHDS
Trigger: TGAGTCATGGGATCTTGGGCAAATTACTTTCTCTAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGAGTGTGTATGCTGTTaGCAGTGCCTAGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPECVCC*QCLVAK
Trigger: CTTGGCCACTAGGCACTGGCAACAGCATACACACTC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTTAATGAGAGGAGCTaGAAAGTCACACAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFNERS*KVTQQK
Trigger: CTTTTGCTGTGTGACTTTGCAGCTCCTCTCATTAAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATGGGAGAGGGGGCTCTaGCTCTTTAATGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLWERGL*LFNERS
Trigger: GCTCCTCTCATTAAAGAGGCAGAGCCCCCTCTCCCA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGGGTAAGCATTTATTaGTTACACATCAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGVSIY*LHIRVN
Trigger: GTTTACTCTGATGTGTAAGCAATAAATGCTTACCCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTAGGGAGTCCTGGGCCTaGTCACTTCTATTACTCATA +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFRESWA*SLLLLI
Trigger: TATGAGTAATAGAAGTGAGCAGGCCCAGGACTCCCT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACTCTCCACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTACTCAGCTGGAGGAAGTaGTGCCTTGGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLHYHCQGLSQDHFSVYLLSWRK*CLGFWF
Trigger: AAACCAAAAGCCAAGGCACCACTTCCTCCAGCTGAG...TAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp ACTCTCCACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTAATATTTGGTCTCAGCTaGAGGAAGTGGTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TLHYHCQGLSQDHFSVYLIFGLS*RKWCLG
Trigger: GCCAAGGCACCACTTCCTCCAGCTGAGACCAAATAT...TAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAGGTTTTGTGATATTTaGCAGGACTCTCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFARFCDI*QDSLLT
Trigger: TGTCAACAGAGAGTCCTGCCAAATATCACAAAACCT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATATACTACACTGTGTaGTTCTTGTCCATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAIYYTV*FLSICA
Trigger: AGCACAGATGGACAAGAACCACACAGTGTAGTATAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAGACACACCAAGCTGTaGGATGTCCACAAATTTATT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFARHTKL*DVHKFI
Trigger: AATAAATTTGTGGACATCCCACAGCTTGGTGTGTCT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCTGTCGCATCTGTTCTaGGTCAGAGCTTTGGAATGT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFLSHLF*VRALEC
Trigger: ACATTCCAAAGCTCTGACCCAGAACAGATGCGACAG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGGAAGTGAAGTGCAGTaGTGTGGCAGGGTAACATTT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAGSEVQ*CGRVTF
Trigger: AAATGTTACCCTGCCACACCACTGCACTTCACTTCC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAACAATTCAGTCTTTCTTaGTTCCCACAGGTAACCACC +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQQFSLS*FPQVTT
Trigger: GGTGGTTACCTGTGGGAACCAAGAAAGACTGAATTG...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATCGCAAGGCGTGGGCTaGAAACTAAGAATAAACTGG +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIASQGVG*KLRINW
Trigger: CCAGTTTATTCTTAGTTTCCAGCCCACGCCTTGCGA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTACAGAATCAGCAGCTaGAGAGACATCAGTATATTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAYRISS*RDISIF
Trigger: AAATATACTGATGTCTCTTCAGCTGCTGATTCTGTA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCTTGATGGATTTAAGTaGTACTGTGCACAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALDGFK*YCAQRN
Trigger: ATTCCTTTGTGCACAGTATCACTTAAATCCATCAAG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGTGGTTCTGTTCAGCTaGCAACAGATCGATTGTGTA +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFVVLFS*QQIDCV
Trigger: TACACAATCGATCTGTTGTCAGCTGAACAGAACCAC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATGTCCTTCTCAAAGATaGATTCCCTGCAGACATGCT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIACPSQR*IPCRHA
Trigger: AGCATGTCTGCAGGGAATTCATCTTTGAGAAGGACA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCAACACCTTCTACATTaGTTTCTGTTTTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAQHLLH*FLFSSL
Trigger: GAGTGAAGAAAACAGAAATCAATGTAGAAGGTGTTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACAAGAAGGGGTTGTCTaGATTGCTGCATCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAQEGVV*IAASFV
Trigger: GACAAAAGATGCAGCAATTCAGACAACCCCTTCTTG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAGTCAGATAAATTATaGTCTTGGTGTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAESDKL*SWCFPS
Trigger: TGATGGGAAACACCAAGATCATAATTTATCTGACTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTCGTGTAATTTCATTTaGAGGTTTTGGCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASCNFI*RFWLGI
Trigger: AATCCCAAGCCAAAACCTTCAAATGAAATTACACGA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAAAGCATGCATGTCCTaGTCATCTTTATACTCTATG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAKACMS*SSLYSM
Trigger: CATAGAGTATAAAGATGATCAGGACATGCATGCTTT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCATGGCATCATCAGGTaGGCTCACAGAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIHGIIR*AHRTGH
Trigger: GTGCCCAGTTCTGTGAGCTCACCTGATGATGCCATG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGGTTGTGGAACAGAGTaGGGCATTTTACTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAGCGTE*GILLKG
Trigger: TCCCTTAAGTAAAATGCCTCACTCTGTTCCACAACC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATTTTGTGTGGATACCTaGCTAGCAGGAATTGTCACA +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQFCVDT*LAGIVT
Trigger: TGTGACAATTCCTGCTAGTCAGGTATCCACACAAAA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTGCACTGGCACTAGGTaGCTCGGTGCGCTCTTTACT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFCTGTR*LGALFT
Trigger: AGTAAAGAGCGCACCGAGTCACCTAGTGCCAGTGCA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGAGGGTCTCTCCAACTaGTTCAAGGAAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLEGLSN*FKENSS
Trigger: GCTGCTGTTTTCCTTGAATCAGTTGGAGAGACCCTC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATACACAAGGCTGCCGTaGACATTTTTGCAGATGTCT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAYTRLP*TFLQMS
Trigger: AGACATCTGCAAAAATGTTCACGGCAGCCTTGTGTA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAAGGACTTGGATAAGATaGCAGAGTGTGTATGCTGTT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQRTWIR*QSVYAV
Trigger: AACAGCATACACACTCTGTCATCTTATCCAAGTCCT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATTGGATGTGGGACTCTaGGACTCCTCTGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLLDVGL*DSSASV
Trigger: CACAGAAGCAGAGGAGTCTCAGAGTCCCACATCCAA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCAGAGAGGGAAAGAACTaGGGCCATCACTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPREGKN*GHHCYH
Trigger: GTGATAGCAGTGATGGCCTCAGTTCTTTCCCTCTCT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATTAGTAAGTCATCTGTaGGATTCTGGAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQLVSHL*DSGGNS
Trigger: GCTGTTTCCTCCAGAATCTCACAGATGACTTACTAA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTCAACAATAGTGTATaGAACGGATCAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFNNSV*NGSNSH
Trigger: ATGTGAGTTTGATCCGTTGCATACACTATTGTTGAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp CAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACAGTTCAACAATAGTGTATaGAACGGATCAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: QMSMMLWLPQVSQGTQRQFNNSV*NGSNSH
Trigger: ATGTGAGTTTGATCCGTTGCATACACTATTGTTGAA...CTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATCTTTTGTCTTTTCTaGACTGGGTTGATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRIFCLF*TGLIQF
Trigger: AAACTGAATCAACCCAGTGCAGAAAAGACAAAAGAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTCTATGGTTTCTGATTaGCAGTCTTTCGATATTTCC +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASMVSD*QSFDIS
Trigger: GGAAATATCGAAAGACTGGCAATCAGAAACCATAGA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGACACTCTTGGCAGCTaGAGATGTCACATAGTGACC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLDTLGS*RCHIVT
Trigger: GGTCACTATGTGACATCTGCAGCTGCCAAGAGTGTC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATTGAGGCCATCACTATaGCTATCGCTATCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLRPSL*LSLSQG
Trigger: GCCTTGCGATAGCGATAGGCATAGTGATGGCCTCAA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTCCACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTATTAGAGGAAGTGGTGCCTTaGCTTTTGGTTTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LHYHCQGLSQDHFSVYLLEEVVP*LLVFSW
Trigger: CCAGGAGAAAACCAAAAGCCAAGGCACCACTTCCTC...TAATAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGAGGAAGTGGTGCCTTaGCTTTTGGTTTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPEEVVP*LLVFSW
Trigger: CCAGGAGAAAACCAAAAGCCAAGGCACCACTTCCTC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTACTCAGCTGGAGGAAGTaGTGCCTTGGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLSWRK*CLGFWF
Trigger: AAACCAAAAGCCAAGGCACCACTTCCTCCAGCTGAG...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACAGTCTCACAGTTTTCTCTaGTATTATAGGTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: QMSMMLWLPQVSQGTQRQSHSFL*YYRCRF
Trigger: AAACCTACACCTATAATACCAGAGAAAACTGTGAGA...CTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACATCTTTATACTCTATaGTTTCTGATTGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRHLYTL*FLIASL
Trigger: AAGACTGGCAATCAGAAACCATAGAGTATAAAGATG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCGAGCTGGGTTTGGCCTaGGCATTTGAAGCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIELGLA*AFEARD
Trigger: ATCTCGGGCTTCAAATGCCCAGGCCAAACCCAGCTC...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAAAAAAGAGCTGGGTTTaGCCTGGGCATTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLKKSWV*PGHLKP
Trigger: GGGCTTCAAATGCCCAGGCCAAACCCAGCTCTTTTT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTATTTGTCAGTTCTTTTaGAGCAGGATTAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFICQFF*SRIRGS
Trigger: GCTGCCCCTAATCCTGCTCCAAAAGAACTGACAAAT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTTCCTCTGTGTTGGCTaGAGGTTGGACCAATGCACT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPFLCVG*RLDQCT
Trigger: AGTGCATTGGTCCAACCTCCAGCCAACACAGAGGAA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATCCCTTCCTCTGTGTTaGCTGGAGGTTGGACCAATG +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLSLPLC*LEVGPM
Trigger: CATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATCTAGCTTGTTCATTTaGACTGCTGTGTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQSSLFI*TAVWKS
Trigger: AGACTTCCACACAGCAGTCCAAATGAACAAGCTAGA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCAATTCAGTCTTTCTTaGTTCCCACAGGTAACCACC +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFQFSLS*FPQVTT
Trigger: GGTGGTTACCTGTGGGAACCAAGAAAGACTGAATTG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAACAAATTAGTAATTaGATGTGGGACTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAEQISN*MWDSET
Trigger: AGTCTCAGAGTCCCACATCCAATTACTAATTTGTTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAAACCACAAACCTTGGTaGTATTGCTGGGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIANHKPW*YCWGKH
Trigger: ATGCTTACCCCAGCAATACCACCAAGGTTTGTGGTT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCACCATTGCCAAGGGCTaGGTCAGGATCATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPTIAKG*VRIIFQ
Trigger: CTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATTCCATGGAGTTTTGTaGGAACTCTCCACTACCATT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAFHGVL*ELSTTI
Trigger: AATGGTAGTGGAGAGTTCTCACAAAACTCCATGGAA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAGAGGGTCTCTCCAACTaGTTCAAGGAAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLEGLSN*FKENSS
Trigger: GCTGCTGTTTTCCTTGAATCAGTTGGAGAGACCCTC...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAGCAAGCAGAAACACATaGACCTTTGAGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLASRNT*TFEGWS
Trigger: AGACCAGCCCTCAAAGGTTCATGTGTTTCTGCTTGC...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTATTTTCTGATCCCTTaGAGGTATCCAAAACCCACC +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFYFLIP*RYPKPT
Trigger: GGTGGGTTTTGGATACCTTCAAGGGATCAGAAAATA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTCAACAATAGTGTATaGAACGGATCAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFNNSV*NGSNSH
Trigger: ATGTGAGTTTGATCCGTTGCATACACTATTGTTGAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATCTTTTGTCTTTTCTaGACTGGGTTGATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAIFCLF*TGLIQF
Trigger: AAACTGAATCAACCCAGTGCAGAAAAGACAAAAGAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCAGGGAGTCCTGGGCCTaGTCACTTCTATTACTCATA +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPRESWA*SLLLLI
Trigger: TATGAGTAATAGAAGTGAGCAGGCCCAGGACTCCCT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTACTCAGCTGGAGGAAGTaGTGCCTTGGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLLSWRK*CLGFWF
Trigger: AAACCAAAAGCCAAGGCACCACTTCCTCCAGCTGAG...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTCTCACAGTTTTCTCTaGTATTATAGGTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFASHSFL*YYRCRF
Trigger: AAACCTACACCTATAATACCAGAGAAAACTGTGAGA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp ACTCTCCACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTATTGAAGCGATGCATGTaGACTCACTCTCACTATGGT +
Preference number: 4 (lower is better)
Translates to: TLHYHCQGLSQDHFSVYLLKRCM*THSHYG
Trigger: ACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAA...TAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAGGGTATTTTGGAGGGTaGGGAAGGTGCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLGYFGG*GRCFSL
Trigger: AAGCGAAAAGCACCTTCCCCACCCTCCAAAATACCC...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAATATACTACACTGTGTaGTTCTTGTCCATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQIYYTV*FLSICA
Trigger: AGCACAGATGGACAAGAACCACACAGTGTAGTATAT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTGTCTTTTCTGCACTaGGTTGATTCAGTTTTTGAT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALSFLH*VDSVFD
Trigger: ATCAAAAACTGAATCAACCCAGTGCAGAAAAGACAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTACCATGTGCACAAATTaGATCTTTTACGGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFTMCTN*IFYGKR
Trigger: CCGCTTACCGTAAAAGATCCAATTTGTGCACATGGT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCATCTTTATACTCTATaGTTTCTGATTGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAHLYTL*FLIASL
Trigger: AAGACTGGCAATCAGAAACCATAGAGTATAAAGATG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTTCAACAAGGGGTTGTaGAACAGAGTGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFFNKGL*NRVRHF
Trigger: AAAATGCCTCACTCTGTTCCACAACCCCTTGTTGAA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATTCAACAAGGGGTTGTaGAACAGAGTGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAFNKGL*NRVRHF
Trigger: AAAATGCCTCACTCTGTTCCACAACCCCTTGTTGAA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATTATTCCAGCTGGGCTaGATAGCTCCTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLLFQLG*IAPQES
Trigger: ACTCTCCTGAGGAGCTATCCAGCCCAGCTGGAATAA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATACATTCTCTTGGTTTaGGCCCAACGACTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAYILLV*AQRLQV
Trigger: AACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCAAGAAACAATAGAATaGCTAACAGAAATACGATCG +
Preference number: 4 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAQETIE*LTEIRS
Trigger: CGATCGTATTTCTGTTAGCCATTCTATTGTTTCTTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCACCAACCACAAACCTTaGTGGTATTGCTGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPTNHKP*WYCWGK
Trigger: CTTACCCCAGCAATACCACCAAGGTTTGTGGTTGGT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGATGACTTTGACAGCTaGGCTCTCATGCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLDDFDS*ALMLLG
Trigger: ACCTAGAAGCATGAGAGCCCAGCTGTCAAAGTCATC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR CAA 72 bp AAGTCTCAGGACAAAGATTGGTCTCATTTCAAGGACTaGGATAAGATGACAGAGTGTGTATGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KSQDKDWSHFKD*DKMTECVCCCQ
Trigger: CTGGCAACAGCATACACACTCTGTCATCTTATCCAAGTCCTTGAAATGAGACCAATCTTTGTCCTGAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAACTCCTGAATTCCCTTaGGGTATTTACAGAATCTTG +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIATPEFP*GIYRIL
Trigger: CAAGATTCTGTAAATACCTCAAGGGAATTCAGGAGT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATCGTGTAATTTCATTTaGAGGTTTTGGCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQSCNFI*RFWLGI
Trigger: AATCCCAAGCCAAAACCTTCAAATGAAATTACACGA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAAAAGCATGCATGTCCTaGTCATCTTTATACTCTATG +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQKACMS*SSLYSM
Trigger: CATAGAGTATAAAGATGATCAGGACATGCATGCTTT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATCTTTCACATTCTCATaGGTGTGCTTTTTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQSFTFS*VCFFPK
Trigger: TTTAGGGAAAAAGCACACTCATGAGAATGTGAAAGA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGGTTGTGGAACAGAGTaGGGCATTTTACTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLGCGTE*GILLKG
Trigger: TCCCTTAAGTAAAATGCCTCACTCTGTTCCACAACC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTCTCATAACAGTGAATaGTGGGCCATCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPSHNSE*WAISWS
Trigger: ACTCCAACTGATGGCCCATCATTCACTGTTATGAGA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAAGTATGAAGTTGGTCTaGAGTGGAAGTGAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLSMKLV*SGSEVQ
Trigger: CTGCACTTCACTTCCACTTCAGACCAACTTCATACT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAAGATCTGGCAGTTCATaGAGAGGTGAAATCGGAAGA +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLRSGSS*RGEIGR
Trigger: TCTTCCGATTTCACCTCTTCATGAACTGCCAGATCT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCAAACACATGAACCTTTaGGGGCTGGTCTTAGAACTG +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPKHMNL*GLVLEL
Trigger: CAGTTCTAAGACCAGCCCTCAAAGGTTCATGTGTTT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCACTCTCCACTACCATTaGCAAGGGCTGAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFITLHYH*QGLSQD
Trigger: ATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGTGCAAAAGGAGCTGTaGCAGTGTCTCTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPVQKEL*QCLLSF
Trigger: AAATGACAAGAGACACTGGCACAGCTCCTTTTGCAC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCAAGGGAGAAAGAGTCTaGTCCGGAGAAGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIKGERV*SGEGSI
Trigger: TATGCTGCCTTCTCCGGAGCAGACTCTTTCTCCCTT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAATAGAGAAAGTAATTTaGCCAAGATCCCATGACTCA +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQIEKVI*PRSHDS
Trigger: TGAGTCATGGGATCTTGGGCAAATTACTTTCTCTAT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAAAGAAAAATACAGGATaGCTAGTTAGCTTGAACGTC +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQKKNTG*LVSLNV
Trigger: GACGTTCAAGCTAACTAGGCATCCTGTATTTTTCTT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCATATTTGGTCTCAGCTaGAGGAAGTGGTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIIFGLS*RKWCLG
Trigger: GCCAAGGCACCACTTCCTCCAGCTGAGACCAAATAT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAGGGGCACTTGCAGTTTaGTCTCGCTTTTTCTTACTG +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLGALAV*SRFFLL
Trigger: CAGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCCC...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGAGGGTATTTTGGAGGGTaGGGAAGGTGCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRGYFGG*GRCFSL
Trigger: AAGCGAAAAGCACCTTCCCCACCCTCCAAAATACCC...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTATATACTACACTGTGTaGTTCTTGTCCATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFIYYTV*FLSICA
Trigger: AGCACAGATGGACAAGAACCACACAGTGTAGTATAT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCGTGAGCTCACAGAACTaGGCACTTGATGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFVSSQN*ALDALF
Trigger: GAACAGAGCATCAAGTGCCCAGTTCTGTGAGCTCAC...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTATTTCTTCCAAATTTaGTGCAAAAGGAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFYFFQI*CKRSCA
Trigger: GGCACAGCTCCTTTTGCACCAAATTTGGAAGAAATA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATATTTCTTCCAAATTTaGTGCAAAAGGAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAYFFQI*CKRSCA
Trigger: GGCACAGCTCCTTTTGCACCAAATTTGGAAGAAATA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAATTTGTCAGTTCTTTTaGAGCAGGATTAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLICQFF*SRIRGS
Trigger: GCTGCCCCTAATCCTGCTCCAAAAGAACTGACAAAT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTAGACACACCAAGCTGTaGGATGTCCACAAATTTATT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFRHTKL*DVHKFI
Trigger: AATAAATTTGTGGACATCCCACAGCTTGGTGTGTCT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTCAGGGGACATGGAATaGCTGAGTCTTGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFSGDME*LSLDLP
Trigger: TGGAAGGTCAAGACTCAGCCATTCCATGTCCCCTGA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTATTCCAGCTGGGCTaGATAGCTCCTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFLFQLG*IAPQES
Trigger: ACTCTCCTGAGGAGCTATCCAGCCCAGCTGGAATAA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACTTCCAGAACACTGCTaGTATAAAAGGCAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIALPEHC*YKRQVV
Trigger: AACAACTTGCCTTTTATACCAGCAGTGTTCTGGAAG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTCTCAGGACAAAGATTaGTCTCATTTCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFSQDKD*SHFKDL
Trigger: CAAGTCCTTGAAATGAGACCAATCTTTGTCCTGAGA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAAACCACAAACCTTGGTaGTATTGCTGGGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLNHKPW*YCWGKH
Trigger: ATGCTTACCCCAGCAATACCACCAAGGTTTGTGGTT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTTGCTTTTAACTGGTTaGGAGCTAGACAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFLLLTG*ELDRKS
Trigger: AGACTTTCTGTCTAGCTCCCAACCAGTTAAAAGCAA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCGTAATGACGCCTCTTaGTTTCTTGACTTAGGGAGT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPRNDAS*FLDLGS
Trigger: ACTCCCTAAGTCAAGAAACCAAGAGGCGTCATTACG...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCTTGATGGATTTAAGTaGTACTGTGCACAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFLDGFK*YCAQRN
Trigger: ATTCCTTTGTGCACAGTATCACTTAAATCCATCAAG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAGTGGTTCTGTTCAGCTaGCAACAGATCGATTGTGTA +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLVVLFS*QQIDCV
Trigger: TACACAATCGATCTGTTGTCAGCTGAACAGAACCAC...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGAACCATTGCCAAGGGCTaGGTCAGGATCATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRTIAKG*VRIIFQ
Trigger: CTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGT...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTACAAGAAGGGGTTGTCTaGATTGCTGCATCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLQEGVV*IAASFV
Trigger: GACAAAAGATGCAGCAATTCAGACAACCCCTTCTTG...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGAGTCAGATAAATTATaGTCTTGGTGTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAESDKL*SWCFPS
Trigger: TGATGGGAAACACCAAGATCATAATTTATCTGACTC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAATACTCTATGGTTTCTaGTTGCCAGTCTTTCGATAT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAILYGF*LPVFRY
Trigger: ATATCGAAAGACTGGCAATCAGAAACCATAGAGTAT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCACAGAACTGGGCACTTaGTGCTCTGTTCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFTELGT*CSVLRL
Trigger: TAACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCACAGAACTGGGCACTTaGTGCTCTGTTCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFITELGT*CSVLRL
Trigger: TAACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATTTGGCCTGGGCATTTaGAGCCCGAGATTTAAATTT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLFGLGI*SPRFKF
Trigger: AAATTTAAATCTCGGGCTTCAAATGCCCAGGCCAAA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATCTCATAACAGTGAATaGTGGGCCATCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLSHNSE*WAISWS
Trigger: ACTCCAACTGATGGCCCATCATTCACTGTTATGAGA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCAGTTCATGAAGAGGTaGAATCGGAAGAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFQFMKR*NRKKGH
Trigger: GTGACCCTTCTTCCGATTTCACCTCTTCATGAACTG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTGGAAATCTTCACTATaGCCTCTAATTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFWKSSL*PLIASS
Trigger: AGAACTTGCAATTAGAGGTCATAGTGAAGATTTCCA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAATCTTTTGTCTTTTCTaGACTGGGTTGATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQIFCLF*TGLIQF
Trigger: AAACTGAATCAACCCAGTGCAGAAAAGACAAAAGAT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAGTGCAAAAGGAGCTGTaGCAGTGTCTCTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLVQKEL*QCLLSF
Trigger: AAATGACAAGAGACACTGGCACAGCTCCTTTTGCAC...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGCAGATGTCTCCTTATaGATGTGCATAAGTACTTAT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAADVSL*MCISTY
Trigger: ATAAGTACTTATGCACATGCATAAGGAGACATCTGC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTTTGTGAAGCAGAGATaGCAACAGATCTCTACAAAT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFFVKQR*QQISTN
Trigger: ATTTGTAGAGATCTGTTGGCATCTCTGCTTCACAAA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAAGCAAAAGGTACGGATaGAAGAGAGGGAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLSKRYG*KRGKEL
Trigger: CAGTTCTTTCCCTCTCTTGCATCCGTACCTTTTGCT...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATTTAACAGGGTGTATTaGACCTATTGCCACATTAAT +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQFNRVY*TYCHIN
Trigger: ATTAATGTGGCAATAGGTGCAATACACCCTGTTAAA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTAAGAAAAATACAGGATaGCTAGTTAGCTTGAACGTC +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFKKNTG*LVSLNV
Trigger: GACGTTCAAGCTAACTAGGCATCCTGTATTTTTCTT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATTGAAGCGATGCATGTaGACTCACTCTCACTATGGT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLLKRCM*THSHYG
Trigger: ACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAACCATGTGCACAAATTaGATCTTTTACGGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLTMCTN*IFYGKR
Trigger: CCGCTTACCGTAAAAGATCCAATTTGTGCACATGGT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATGTCTCTTGTCATTTTaGGAGCAGGTTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLCLLSF*EQVSED
Trigger: GTCCTCTGAAACCTGCTCCCAAAATGACAAGAGACA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATCTAGCTTGTTCATTTaGACTGCTGTGTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLSSLFI*TAVWKS
Trigger: AGACTTCCACACAGCAGTCCAAATGAACAAGCTAGA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAAATAACTTCCTATTCTaGTATCCCTTGAAATCTAGC +
Preference number: 4 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQNNFLF*YPLKSS
Trigger: GCTAGATTTCAAGGGATACCAGAATAGGAAGTTATT...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCCTTGGTGGTATTGCTaGGGTAAGCATTTATTGCTT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPPWWYC*GKHLLL
Trigger: AAGCAATAAATGCTTACCCCAGCAATACCACCAAGG...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCACCAACCACAAACCTTaGTGGTATTGCTGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFTNHKP*WYCWGK
Trigger: CTTACCCCAGCAATACCACCAAGGTTTGTGGTTGGT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTAGAATTGCTTTTAACTaGTTGGGAGCTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFRIAFN*LGARQK
Trigger: TTTCTGTCTAGCTCCCAACCAGTTAAAAGCAATTCT...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCGATGACTTTGACAGCTaGGCTCTCATGCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIDDFDS*ALMLLG
Trigger: ACCTAGAAGCATGAGAGCCCAGCTGTCAAAGTCATC...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGAGTGGTTCTGTTCAGCTaGCAACAGATCGATTGTGTA +
Preference number: 4 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRVVLFS*QQIDCV
Trigger: TACACAATCGATCTGTTGTCAGCTGAACAGAACCAC...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCGGCAGGACTCTCTGTTaGCATCCATCGCATATAATT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFGRTLC*HPSHII
Trigger: AATTATATGCGATGGATGTCAACAGAGAGTCCTGCC...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATTCCATGGAGTTTTGTaGGAACTCTCCACTACCATT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLFHGVL*ELSTTI
Trigger: AATGGTAGTGGAGAGTTCTCACAAAACTCCATGGAA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCATAATTAGGGTGCCTTaGCTCCTGAATTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIIIRVP*LLNSLE
Trigger: CTCAAGGGAATTCAGGAGTCAAGGCACCCTAATTAT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATTTTGTGTGGATACCTaGCTAGCAGGAATTGTCACA +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLFCVDT*LAGIVT
Trigger: TGTGACAATTCCTGCTAGTCAGGTATCCACACAAAA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCAGTATGAAGTTGGTCTaGAGTGGAAGTGAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFISMKLV*SGSEVQ
Trigger: CTGCACTTCACTTCCACTTCAGACCAACTTCATACT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAAATTTCTTTCCCCATTaGCAGGATAGCACATGTTCT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLNFFPH*QDSTCS
Trigger: AGAACATGTGCTATCCTGTCAATGGGGAAAGAAATT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTACCTCAGAAATCACTTTaGCCCTGGAAATCTTCACTA +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLPQKSL*PWKSSL
Trigger: TAGTGAAGATTTCCAGGGTCAAAGTGATTTCTGAGG...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCAAACACATGAACCTTTaGGGGCTGGTCTTAGAACTG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIKHMNL*GLVLEL
Trigger: CAGTTCTAAGACCAGCCCTCAAAGGTTCATGTGTTT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATTAGTAAGTCATCTGTaGGATTCTGGAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLLVSHL*DSGGNS
Trigger: GCTGTTTCCTCCAGAATCTCACAGATGACTTACTAA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGACTGGAAAGCCCAGGGTaGAAGGTTTCACTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRLESPG*KVSLKD
Trigger: ATCTTTAAGTGAAACCTTTCACCCTGGGCTTTCCAG...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCAGCATATCCCTTTCTaGCTCTTTATTTGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPQHIPF*LFICQF
Trigger: GAACTGACAAATAAAGAGGCAGAAAGGGATATGCTG...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAACTCTGAGACTCCTCTaGTTCTGTGACCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLTLRLL*FCDLCK
Trigger: TTTACAAAGGTCACAGAAGCAGAGGAGTCTCAGAGT...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCAGCAAAAGGTACGGATaGAAGAGAGGGAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFSKRYG*KRGKEL
Trigger: CAGTTCTTTCCCTCTCTTGCATCCGTACCTTTTGCT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATTTAATGAGAGGAGCTaGAAAGTCACACAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLFNERS*KVTQQK
Trigger: CTTTTGCTGTGTGACTTTGCAGCTCCTCTCATTAAA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCAAACCTTGGTGGTATTaGTGGGGTAAGCATTTATTG +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPKPWWY*WGKHLL
Trigger: CAATAAATGCTTACCCCAGCAATACCACCAAGGTTT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATCTCACAGTTTTCTCTaGTATTATAGGTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIASHSFL*YYRCRF
Trigger: AAACCTACACCTATAATACCAGAGAAAACTGTGAGA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCCGACGGCAGGGTGTTaGAAATATATGGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIPTAGC*KYMVWK
Trigger: TTTCCAAACCATATATTTCCAACACCCTGCCGTCGG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATTGTCTTTTCTGCACTaGGTTGATTCAGTTTTTGAT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIALSFLH*VDSVFD
Trigger: ATCAAAAACTGAATCAACCCAGTGCAGAAAAGACAA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATTGAAGGTTTTGGCTTaGGATTGTAGTCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLKVLA*DCSPVY
Trigger: ATAGACAGGACTACAATCCCAAGCCAAAACCTTCAA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACATCTTTATACTCTATaGTTTCTGATTGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: YGCKRERIEAITMPIAIAHLYTL*FLIASL
Trigger: AAGACTGGCAATCAGAAACCATAGAGTATAAAGATG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCATCTTTATACTCTATaGTTTCTGATTGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LGLLTSITHMADSASSFFHLYTL*FLIASL
Trigger: AAGACTGGCAATCAGAAACCATAGAGTATAAAGATG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTGTCTCTTGTCATTTTaGGAGCAGGTTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFICLLSF*EQVSED
Trigger: GTCCTCTGAAACCTGCTCCCAAAATGACAAGAGACA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAGCCATCAGTTGGAGTTaGTATTTGGGAATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLAISWS*YLGILF
Trigger: GAACAGAATTCCCAAATACCAACTCCAACTGATGGC...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTCATCTGTGAGATTCTaGAGGAAACAGCGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFISSVRF*RKQRCG
Trigger: TCCACAACGCTGTTTCCTCCAGAATCTCACAGATGA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCGTAATGACGCCTCTTaGTTTCTTGACTTAGGGAGT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFRNDAS*FLDLGS
Trigger: ACTCCCTAAGTCAAGAAACCAAGAGGCGTCATTACG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTGATGGATTTAAGTaGTACTGTGCACAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPLDGFK*YCAQRN
Trigger: ATTCCTTTGTGCACAGTATCACTTAAATCCATCAAG...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGAGTCAGATAAATTATaGTCTTGGTGTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPESDKL*SWCFPS
Trigger: TGATGGGAAACACCAAGATCATAATTTATCTGACTC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTCGTGTAATTTCATTTaGAGGTTTTGGCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPSCNFI*RFWLGI
Trigger: AATCCCAAGCCAAAACCTTCAAATGAAATTACACGA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTTGGCCTGGGCATTTaGAGCCCGAGATTTAAATTT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFFGLGI*SPRFKF
Trigger: AAATTTAAATCTCGGGCTTCAAATGCCCAGGCCAAA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATCTATGGTTTCTGATTaGCAGTCTTTCGATATTTCC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLSMVSD*QSFDIS
Trigger: GGAAATATCGAAAGACTGGCAATCAGAAACCATAGA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCACTCTGAGACTCCTCTaGTTCTGTGACCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFITLRLL*FCDLCK
Trigger: TTTACAAAGGTCACAGAAGCAGAGGAGTCTCAGAGT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTTTGTGAAGCAGAGATaGCAACAGATCTCTACAAAT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPFVKQR*QQISTN
Trigger: ATTTGTAGAGATCTGTTGGCATCTCTGCTTCACAAA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGGGGTAAGCATTTATTaGTTACACATCAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLGVSIY*LHIRVN
Trigger: GTTTACTCTGATGTGTAAGCAATAAATGCTTACCCC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTACATTCTCTTGGTTTaGGCCCAACGACTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFYILLV*AQRLQV
Trigger: AACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGAACAAATTAGTAATTaGATGTGGGACTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPEQISN*MWDSET
Trigger: AGTCTCAGAGTCCCACATCCAATTACTAATTTGTTC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCCTTGGTGGTATTGCTaGGGTAAGCATTTATTGCTT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFPWWYC*GKHLLL
Trigger: AAGCAATAAATGCTTACCCCAGCAATACCACCAAGG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCAGAATTGCTTTTAACTaGTTGGGAGCTAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPRIAFN*LGARQK
Trigger: TTTCTGTCTAGCTCCCAACCAGTTAAAAGCAATTCT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCACTCCTGAATTCCCTTaGGGTATTTACAGAATCTTG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFITPEFP*GIYRIL
Trigger: CAAGATTCTGTAAATACCTCAAGGGAATTCAGGAGT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTTTACTGAAAGACTGTaGCCTTTTCACTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIFTERL*PFHYSK
Trigger: CTTGCTGTAGTGAAAAGGTCACAGTCTTTCAGTAAA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTTACTGAAAGACTGTaGCCTTTTCACTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFFTERL*PFHYSK
Trigger: CTTGCTGTAGTGAAAAGGTCACAGTCTTTCAGTAAA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATGGAAATCTTCACTATaGCCTCTAATTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLWKSSL*PLIASS
Trigger: AGAACTTGCAATTAGAGGTCATAGTGAAGATTTCCA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCTTTCAGGTTTTCAATaGAATAGCACAGTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFLSGFQ*NSTVAR
Trigger: TCTGGCAACTGTGCTATTTCATTGAAAACCTGAAAG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCATCTTTTGTCTTTTCTaGACTGGGTTGATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPIFCLF*TGLIQF
Trigger: AAACTGAATCAACCCAGTGCAGAAAAGACAAAAGAT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCATTTTGGAGTCAGAATaGCAGGGCTTAAATGTACAC +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIILESE*QGLNVH
Trigger: GTGTACATTTAAGCCCTGGCATTCTGACTCCAAAAT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCAAACCTTGGTGGTATTaGTGGGGTAAGCATTTATTG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIKPWWY*WGKHLL
Trigger: CAATAAATGCTTACCCCAGCAATACCACCAAGGTTT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGTGTATTGCACCTATTaGCACATTAATGCTGTATAT +
Preference number: 4 (lower is better)
Translates to: NICITKAEHGLGPLSAVLVYCTY*HINAVY
Trigger: ATATACAGCATTAATGTGGCAATAGGTGCAATACAC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCAGGTTTTGTGATATTTaGCAGGACTCTCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIRFCDI*QDSLLT
Trigger: TGTCAACAGAGAGTCCTGCCAAATATCACAAAACCT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTTGTCTTTTCTGCACTaGGTTGATTCAGTTTTTGAT +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPLSFLH*VDSVFD
Trigger: ATCAAAAACTGAATCAACCCAGTGCAGAAAAGACAA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTTGAAGGTTTTGGCTTaGGATTGTAGTCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFILKVLA*DCSPVY
Trigger: ATAGACAGGACTACAATCCCAAGCCAAAACCTTCAA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCAATAACTTCCTATTCTaGTATCCCTTGAAATCTAGC +
Preference number: 4 (lower is better)
Translates to: EVYHMNICITKAEHGLGPNNFLF*YPLKSS
Trigger: GCTAGATTTCAAGGGATACCAGAATAGGAAGTTATT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
3UTR CAA 72 bp TTGAGATGTATTCATGCTGACATATATAGCTCTAGCTaGTTCATTTGGACTGCTGTGTGGAAGTCTATCATA +
Preference number: 4 (lower is better)
Translates to: LRCIHADIYSSS*FIWTAVWKSII
Trigger: TATGATAGACTTCCACACAGCAGTCCAAATGAACAAGCTAGAGCTATATATGTCAGCATGAATACATCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCAACACCTTCTACATTaGTTTCTGTTTTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIQHLLH*FLFSSL
Trigger: GAGTGAAGAAAACAGAAATCAATGTAGAAGGTGTTG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCATACTCTATGGTTTCTaGTTGCCAGTCTTTCGATAT +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIILYGF*LPVFRY
Trigger: ATATCGAAAGACTGGCAATCAGAAACCATAGAGTAT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCAAAGCATGCATGTCCTaGTCATCTTTATACTCTATG +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIKACMS*SSLYSM
Trigger: CATAGAGTATAAAGATGATCAGGACATGCATGCTTT...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR TCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTCTTTCACATTCTCATaGGTGTGCTTTTTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFSFTFS*VCFFPK
Trigger: TTTAGGGAAAAAGCACACTCATGAGAATGTGAAAGA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATTCAACAATAGTGTATaGAACGGATCAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLFNNSV*NGSNSH
Trigger: ATGTGAGTTTGATCCGTTGCATACACTATTGTTGAA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTCTATGGTTTCTGATTaGCAGTCTTTCGATATTTCC +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFSMVSD*QSFDIS
Trigger: GGAAATATCGAAAGACTGGCAATCAGAAACCATAGA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCAACAATAGTGTATaGAACGGATCAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFFNNSV*NGSNSH
Trigger: ATGTGAGTTTGATCCGTTGCATACACTATTGTTGAA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCGTGTATTGCACCTATTaGCACATTAATGCTGTATAT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFVYCTY*HINAVY
Trigger: ATATACAGCATTAATGTGGCAATAGGTGCAATACAC...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR GCA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTTTAACAGGGTGTATTaGACCTATTGCCACATTAAT +
Preference number: 4 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIFNRVY*TYCHIN
Trigger: ATTAATGTGGCAATAGGTGCAATACACCCTGTTAAA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTCTCACAGTTTTCTCTaGTATTATAGGTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFSHSFL*YYRCRF
Trigger: AAACCTACACCTATAATACCAGAGAAAACTGTGAGA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCAAGAAACAATAGAATaGCTAACAGAAATACGATCG +
Preference number: 4 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFQETIE*LTEIRS
Trigger: CGATCGTATTTCTGTTAGCCATTCTATTGTTTCTTG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CCA 90 bp CACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTATTATATAGGTTTTGTGATATTTaGCAGGACTCTTGTAAAGAT +
Preference number: 4 (lower is better)
Translates to: HYHCQGLSQDHFSVYLLYRFCDI*QDSCKD
Trigger: ATCTTTACAAGAGTCCTGCCAAATATCACAAAACCT...ATATAATAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS CCA 90 bp AGTCCGGGAGCTCGCCGCCGCCTCTGCAGCACGGCCGCACATAAGTaGGGACCAGCTCGGCGGCATTGGAGCGAGGGAAGCAGCGAGCCG +
Preference number: 5 (lower is better)
Translates to: SPGARRRLCSTAAHK*GPARRHWSEGSSEP
Trigger: CGGCTCGCTGCTTCCCTCGCTCCAATGCCGCCGAGCTGGTCCCCACTTATGTGCGGCCGTGCTGCAGAGGCGGCGGCGAGCTCCCGGACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409184.8
ENST00000445474.2
ENST00000456693.5
ENST00000483743.6
ENST00000496396.1
ENST00000629362.2
CDS CCA 90 bp CCCGGCCCGCGCTCTTGCCGCTCGGCTCTCAAGCCAGGACTTGAATaGAGAAGCGGCAACCCCTGCGAGGCTCAGCCCAGCGCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PGPRSCRSALKPGLE*RSGNPCEAQPSAGR
Trigger: CCTGCCCGCGCTGGGCTGAGCCTCGCAGGGGTTGCCGCTTCTCCATTCAAGTCCTGGCTTGAGAGCCGAGCGGCAAGAGCGCGGGCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496396.1
CDS CCA 90 bp CTCCCAGGCGGCGCGTCACTGCTTGCCAGGATCCGCGGGGAGGATTaGGGCCTCCGCGGAATGCGGTCAGAAACTCGCAGAGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: LPGGASLLARIRGED*GLRGMRSETRRVGP
Trigger: AGGCCCCACTCTGCGAGTTTCTGACCGCATTCCGCGGAGGCCCCAATCCTCCCCGCGGATCCTGGCAAGCAGTGACGCGCCGCCTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491126.6
CDS GCA 90 bp CTCGCGGCTTCCTCTCCTACTCTTCCCTTCCCCGGCCCGCGCTCTTaGCGCTCGGCTCTCAAGCCAGGACTTGAATGGAGAAGCGGCAAC +
Preference number: 5 (lower is better)
Translates to: LAASSPTLPFPGPRS*RSALKPGLEWRSGN
Trigger: GTTGCCGCTTCTCCATTCAAGTCCTGGCTTGAGAGCCGAGCGGCAAGAGCGCGGGCCGGGGAAGGGAAGAGTAGGAGAGGAAGCCGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414843.5
ENST00000496396.1
CDS CCA 90 bp TGCAAGGTCTTGGGGGACACTCTGAGATGCTGGCATCGGGGGCAGTaGAGCCCGCCTCTTCTTGGGTGCATCCGACGGCAGGGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: CKVLGDTLRCWHRGQ*SPPLLGCIRRQGVG
Trigger: TCCAACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGACCTTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS TCA 90 bp GAAGCAGGCCTCTCCTGGATGTGTGCAAGGTCTTGGGGGACACTCTaGGATGCTGGCATCGGGGGCAGTGGAGCCCGCCTCTTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: EAGLSWMCARSWGTL*DAGIGGSGARLFLG
Trigger: ACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGACCTTGCACACATCCAGGAGAGGCCTGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 90 bp CCTCTCCTGGATGTGTGCAAGGTCTTGGGGGACACTCTGAGATGCTaGCATCGGGGGCAGTGGAGCCCGCCTCTTCTTGGGTGCATCCGA +
Preference number: 5 (lower is better)
Translates to: PLLDVCKVLGDTLRC*HRGQWSPPLLGCIR
Trigger: TCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGACCTTGCACACATCCAGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACCCCGGCCCGCGCTCTaGCCGCTCGGCTCTCAAGCC +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRPRPAL*PLGSQA
Trigger: GGCTTGAGAGCCGAGCGGCAAGAGCGCGGGCCGGGG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACCCCGGCCCGCGCTCTaGCCGCTCGGCTCTCAAGCC +
Preference number: 5 (lower is better)
Translates to: FQMSMMLWLPQVSQGTQRPRPAL*PLGSQA
Trigger: GGCTTGAGAGCCGAGCGGCAAGAGCGCGGGCCGGGG...TCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGAGCCCGCCTCTTCTaGGGTGCATCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGARLF*GASDGR
Trigger: CCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGAGCCCGCCTCTTCTaGGGTGCATCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGARLF*GASDGR
Trigger: CCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS GCA 90 bp CTGAGATGCTGGCATCGGGGGCAGTGGAGCCCGCCTCTTCTTGGGTaGATCCGACGGCAGGGTGTTGGAAATATATGGTTTGGAAATGGT +
Preference number: 5 (lower is better)
Translates to: LRCWHRGQWSPPLLG*IRRQGVGNIWFGNG
Trigger: ACCATTTCCAAACCATATATTTCCAACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCAGCATCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 90 bp CAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTaGAAAGCCCAGGGTGAAAGGTTTCTGGGCTGGATAGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: QRFPPSVWAQCTAPD*KAQGERFLGWIAPQ
Trigger: CTGAGGAGCTATCCAGCCCAGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342193.8
ENST00000629362.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTACCAGCTCGGCGGCATaGGAGCGAGGGAAGCAGCGA +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFATSSAA*ERGKQR
Trigger: TCGCTGCTTCCCTCGCTCCAATGCCGCCGAGCTGGT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409184.8
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGTGGTGCCTTGGCTTTaGGTTTTCTCCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRVVPWL*VFSWLG
Trigger: CCCCAGCCAGGAGAAAACCAAAAGCCAAGGCACCAC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGGAGCCCGCCTCTTCTaGGGTGCATCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: YGCKRERIEAITMPIAIAGARLF*GASDGR
Trigger: CCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGTTTCCTCCATCAGTTaGGGCGCAGTGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRVSSIS*GAVHCS
Trigger: GGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAAC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR CAA 90 bp GACAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGAAAGAATAGGGGCAAGCTCTaGAAGCGATGCATGTGGACT +
Preference number: 5 (lower is better)
Translates to: DRGFLHQFGRSALLLTGKNRGKL*KRCMWT
Trigger: AGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATT...CTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGATGTGTGCAAGGTCTaGGGGGACACTCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRDVCKV*GDTLRC
Trigger: GCATCTCAGAGTGTCCCCCAAGACCTTGCACACATC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGACAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGAGCTCCTCAGGAGAGTTaGCTTCTGAAGCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: KDRGFLHQFGRSALLLTGAPQES*LLKHCL
Trigger: CAGACAGTGCTTCAGAAGCAAACTCTCCTGAGGAGC...TCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp CAGTGCACTGCTCCTGACTGGAAAGCCCAGGGTGAAAGGTTTCACTTAAAGATGGTTTCCTCCATCAGTTaGGGCGCAGTGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: QCTAPDWKAQGERFHLKMVSSIS*GAVHCS
Trigger: GGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAAC...CATCTTTAAGTGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATGTGTTGGCTGGAGGTaGGACCAATGCACTGGCACT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRCVGWR*DQCTGT
Trigger: AGTGCCAGTGCATTGGTCCAACCTCCAGCCAACACA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACCTCTCCCGAACGGATaGCAGTCAGCAAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRPLPNG*QSANSV
Trigger: GACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGAGGAAGTGGTGCCTaGGCTTTTGGTTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGGSGA*AFGFLL
Trigger: CAGGAGAAAACCAAAAGCCAAGGCACCACTTCCTCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGGAGCCCGCCTCTTCTaGGGTGCATCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLGARLF*GASDGR
Trigger: CCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCTCCTCAGGAGAGTTaGCTTCTGAAGCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRAPQES*LLKHCL
Trigger: CAGACAGTGCTTCAGAAGCAAACTCTCCTGAGGAGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAACTCTCCACTACCATaGCCAAGGGCTGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRNSPLP*PRAESG
Trigger: TCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGTT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGAATTGTCACAGGTTTaGGAGCTATGGGAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRELSQV*ELWEEG
Trigger: CCCCTCCTCCCATAGCTCCAAAACCTGTGACAATTC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTCCCTTCCTCTGTGTaGGCTGGAGGTTGGACCAAT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFPSSV*AGGWTN
Trigger: ATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCCTCTCCCGAACGGATaGCAGTCAGCAAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAPLPNG*QSANSV
Trigger: GACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGTGGTGCCTTGGCTTTaGGTTTTCTCCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQVVPWL*VFSWLG
Trigger: CCCCAGCCAGGAGAAAACCAAAAGCCAAGGCACCAC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CAAAGACAGAGGTTTCCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTGGGAGACATCAGTATATTaGGTCTCAGCTGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: QRQRFPPSVWAQCTAPDWETSVY*VSAGGS
Trigger: ACTTCCTCCAGCTGAGACCAAATATACTGATGTCTC...CCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGGAAACCTCTGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAATAGGGGCAAGCTCTaGAAGCGATGCATGTGGACT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRNRGKL*KRCMWT
Trigger: AGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGCTCCTCAGGAGAGTTaGCTTCTGAAGCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAAPQES*LLKHCL
Trigger: CAGACAGTGCTTCAGAAGCAAACTCTCCTGAGGAGC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTGTGCCAGTGTCTCTaGTCATTTTGGGAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLCQCL*SFWEQV
Trigger: AACCTGCTCCCAAAATGACAAGAGACACTGGCACAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTCCCTTCCTCTGTGTaGGCTGGAGGTTGGACCAAT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFPSSV*AGGWTN
Trigger: ATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGTAACCCTTTTCAATTaGGCAGCAGCCTCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRVTLFN*AAASPE
Trigger: TTCGGGAGAGGCTGCTGCCAAATTGAAAAGGGTTAC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS TCA 90 bp GGACTAACCATGGCATCATCAGGTGAGCTCACAGAACTGGGCACTTaGTGCTCTGTTCTCAGGTTAGGCTTCGGTTTAAGGTTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: GLTMASSGELTELGT*CSVLRLGFGLRFGS
Trigger: ACTGCCAAACCTTAAACCGAAGCCTAACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGTGAGCTCACCTGATGATGCCATGGTTAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS TCA 90 bp CATTTTGGGAGCAGGTTTCAGAGGACTAACCATGGCATCATCAGGTaGGCTCACAGAACTGGGCACTTGATGCTCTGTTCTCAGGTTAGG +
Preference number: 5 (lower is better)
Translates to: HFGSRFQRTNHGIIR*AHRTGHLMLCSQVR
Trigger: CCTAACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGTGAGCTCACCTGATGATGCCATGGTTAGTCCTCTGAAACCTGCTCCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 90 bp AATGGTAACCCTTTTCAATTTGGCAGCAGCCTCTCCCGAACGGATTaGAGTCAGCAAACTCTGTCGCATCTGTTCTGGGTCAGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: NGNPFQFGSSLSRTD*SQQTLSHLFWVRAL
Trigger: CAAAGCTCTGACCCAGAACAGATGCGACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGGCTGCTGCCAAATTGAAAAGGGTTACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 90 bp TTATCCATCCCTTTTCAATTTGGCAGCAGCCTCTCCCGAACGGATTaGAGTCAGCAAACTCTGTCGCATCTGTTCTGGGTCAGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LSIPFQFGSSLSRTD*SQQTLSHLFWVRAL
Trigger: CAAAGCTCTGACCCAGAACAGATGCGACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGGCTGCTGCCAAATTGAAAAGGGATGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495084.1
CDS CCA 90 bp CCGCCTCTTCTTGGGTGCATCCGACGGCAGGGTGTTGGAAATATATaGTTTGGAAATGGTATTGGACCTTGTAAAAGTTGGGCGGTGCTT +
Preference number: 5 (lower is better)
Translates to: PPLLGCIRRQGVGNI*FGNGIGPCKSWAVL
Trigger: AAGCACCGCCCAACTTTTACAAGGTCCAATACCATTTCCAAACCATATATTTCCAACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAGGGGCACTTGCAGTTaGGTCTCGCTTTTTCTTACT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRRGTCS*VSLFLT
Trigger: AGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCCCT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATCCGACGGCAGGGTGTaGGAAATATATGGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSDGRV*EIYGLE
Trigger: TTCCAAACCATATATTTCCAACACCCTGCCGTCGGA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACAGTCCGACGGCAGGGTGTaGGAAATATATGGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: QMSMMLWLPQVSQGTQRQSDGRV*EIYGLE
Trigger: TTCCAAACCATATATTTCCAACACCCTGCCGTCGGA...CTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGAGGAGCCCGCCTCTTCTaGGGTGCATCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRGARLF*GASDGR
Trigger: CCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCC...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGAACATTCTCTTGGTTaGGGCCCAACGACTTCAAGT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSREHSLG*GPTTSS
Trigger: ACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTTC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACATGTGCCTCAGAGTTaGATGGTCTCTCAACTTCCA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRHVPQS*MVSQLP
Trigger: TGGAAGTTGAGAGACCATCAAACTCTGAGGCACATG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCACAGAACTGGGCACTaGATGCTCTGTTCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAHRTGH*MLCSQV
Trigger: AACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCTGTGCCAGTGTCTCTaGTCATTTTGGGAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALCQCL*SFWEQV
Trigger: AACCTGCTCCCAAAATGACAAGAGACACTGGCACAG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTACATTCTCTTGGTTaGGGCCCAACGACTTCAAGT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLHSLG*GPTTSS
Trigger: ACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS CCA 90 bp CTCTTCCTGCTTCACAGGGACTCTTATCTGTCTCATCCACGCTCATaGATTTCACTATACAAGAAGCAGGCCTCTCCTGGATGTGTGCAA +
Preference number: 5 (lower is better)
Translates to: LFLLHRDSYLSHPRS*ISLYKKQASPGCVQ
Trigger: TTGCACACATCCAGGAGAGGCCTGCTTCTTGTATAGTGAAATCCATGAGCGTGGATGAGACAGATAAGAGTCCCTGTGAAGCAGGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp ACTCTCCACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTAGTGGTGCCTTGGCTTTaGGTTTTCTCCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TLHYHCQGLSQDHFSVYLVVPWL*VFSWLG
Trigger: CCCCAGCCAGGAGAAAACCAAAAGCCAAGGCACCAC...TAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATGGCAGGACTCTCTGTaGACATCCATCGCATATAAT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRWQDSL*TSIAYN
Trigger: ATTATATGCGATGGATGTCAACAGAGAGTCCTGCCA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCCAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGAAGGGGCACTTGCAGTTaGGTCTCGCTTTTTCTTACT +
Preference number: 5 (lower is better)
Translates to: FQMSMMLWLPQVSQGTQRRGTCS*VSLFLT
Trigger: AGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCCCT...TCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGCTCCTCAGGAGAGTTaGCTTCTGAAGCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQAPQES*LLKHCL
Trigger: CAGACAGTGCTTCAGAAGCAAACTCTCCTGAGGAGC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCATGTGCCTCAGAGTTaGATGGTCTCTCAACTTCCA +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAHVPQS*MVSQLP
Trigger: TGGAAGTTGAGAGACCATCAAACTCTGAGGCACATG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTGTGTTGGCTGGAGGTaGGACCAATGCACTGGCACT +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFCVGWR*DQCTGT
Trigger: AGTGCCAGTGCATTGGTCCAACCTCCAGCCAACACA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGCCATCAGTTGGAGTaGGTATTTGGGAATTCTGTT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGHQLE*VFGNSV
Trigger: AACAGAATTCCCAAATACCAACTCCAACTGATGGCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS CCA 90 bp GGGCACTTGATGCTCTGTTCTCAGGTTAGGCTTCGGTTTAAGGTTTaGCAGTGGCTCTTCTGGGCTTTCAGAAATAGCAGAATCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GHLMLCSQVRLRFKV*QWLFWAFRNSRIFC
Trigger: ACAGAAGATTCTGCTATTTCTGAAAGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAGCCTAACCTGAGAACAGAGCATCAAGTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAGACATCAGTATATTaGGTCTCAGCTGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAETSVY*VSAGGS
Trigger: ACTTCCTCCAGCTGAGACCAAATATACTGATGTCTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGTTTGGAAATGGTATaGGACCTTGTAAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGLEMV*DLVKVG
Trigger: CCCAACTTTTACAAGGTCCAATACCATTTCCAAACC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CAGATGTCAATGATGTTATGGCTGCCTCAGGTGTCCCAGGGCACTCAAAGACAGGGTTTGGAAATGGTATaGGACCTTGTAAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: QMSMMLWLPQVSQGTQRQGLEMV*DLVKVG
Trigger: CCCAACTTTTACAAGGTCCAATACCATTTCCAAACC...CTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATACACTGTGTGGTTCTaGTCCATCTGTGCTTTTAGT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRYTVWF*SICAFS
Trigger: ACTAAAAGCACAGATGGACAAGAACCACACAGTGTA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAATTTTGAACATTCTCTaGGTTTGGGCCCAACGACTT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRILNIL*VWAQRL
Trigger: AAGTCGTTGGGCCCAAACCAAGAGAATGTTCAAAAT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342193.8
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAACTGTGCCAGTGTCTCTaGTCATTTTGGGAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQLCQCL*SFWEQV
Trigger: AACCTGCTCCCAAAATGACAAGAGACACTGGCACAG...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTTTTCAACAAGGGGTaGTGGAACAGAGTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFFNKG*WNRVRH
Trigger: ATGCCTCACTCTGTTCCACAACCCCTTGTTGAAAAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGAATTGTCACAGGTTTaGGAGCTATGGGAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: YGCKRERIEAITMPIAIAELSQV*ELWEEG
Trigger: CCCCTCCTCCCATAGCTCCAAAACCTGTGACAATTC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTTCCCTTCCTCTGTGTaGGCTGGAGGTTGGACCAAT +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFFPSSV*AGGWTN
Trigger: ATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGAA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGCCATCAGTTGGAGTaGGTATTTGGGAATTCTGTT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGHQLE*VFGNSV
Trigger: AACAGAATTCCCAAATACCAACTCCAACTGATGGCC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTATGATGGGCCATCAGTaGGAGTTGGTATTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAMMGHQ*ELVFGN
Trigger: ATTCCCAAATACCAACTCCAACTGATGGCCCATCAT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTGAACTACATTCTCTaGGTTTGGGCCCAACGACTT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALNYIL*VWAQRL
Trigger: AAGTCGTTGGGCCCAAACCAAGAGAATGTAGTTCAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAACTTAGACCATGCATTTaGGAGTCAGAATGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQLRPCI*ESECQG
Trigger: GCCCTGGCATTCTGACTCCAAAATGCATGGTCTAAG...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGGATCAAACTCACATTaGCTACATATAATAGGGGCA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRGSNSH*LHIIGA
Trigger: TGCCCCTATTATATGTAGCAAATGTGAGTTTGATCC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGGTTTGGAAATGGTATaGGACCTTGTAAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAGLEMV*DLVKVG
Trigger: CCCAACTTTTACAAGGTCCAATACCATTTCCAAACC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGATGTGTGCAAGGTCTaGGGGGACACTCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLDVCKV*GDTLRC
Trigger: GCATCTCAGAGTGTCCCCCAAGACCTTGCACACATC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAAGGTGCTTTTCGCTTaGTCCTTCTCAAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRKVLFA*SFSKMN
Trigger: ATTCATCTTTGAGAAGGACAAAGCGAAAAGCACCTT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTACACTGTGTGGTTCTaGTCCATCTGTGCTTTTAGT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAYTVWF*SICAFS
Trigger: ACTAAAAGCACAGATGGACAAGAACCACACAGTGTA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCTTTTCTGCACTGGGTaGATTCAGTTTTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFALFCTG*IQFLIW
Trigger: CCAGATCAAAAACTGAATCAACCCAGTGCAGAAAAG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAAGGGGTTGTCTGAATaGCTGCATCTTTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRKGLSE*LHLLSF
Trigger: AAAAGACAAAAGATGCAGCAATTCAGACAACCCCTT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGAAGCAGTGGAATTTTaGTCAATCCTATCTACAGGA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSREAVEF*SILSTG
Trigger: TCCTGTAGATAGGATTGACAAAAATTCCACTGCTTC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGTAGTCATGCCAATTTaGGGTATATACTCTCGTGTA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRVVMPI*GIYSRV
Trigger: TACACGAGAGTATATACCCAAAATTGGCATGACTAC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGATTTCTGCCTCTTTATTaGTCAGTTCTTTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRFLPLY*SVLLEQ
Trigger: CTGCTCCAAAAGAACTGACAAATAAAGAGGCAGAAA...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAGCCGACAAATGGGCATaGTTTTGCTTAACAGTTTTA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRADKWA*FCLTVL
Trigger: TAAAACTGTTAAGCAAAACAATGCCCATTTGTCGGC...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAACTACATTCTCTTGGTTaGGGCCCAACGACTTCAAGT +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQLHSLG*GPTTSS
Trigger: ACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTAG...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCTTAGACCATGCATTTaGGAGTCAGAATGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFLRPCI*ESECQG
Trigger: GCCCTGGCATTCTGACTCCAAAATGCATGGTCTAAG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGTCTCAGGACAAAGATaGGTCTCATTTCAAGGACTT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAVSGQR*VSFQGL
Trigger: AAGTCCTTGAAATGAGACCAATCTTTGTCCTGAGAC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS TCA 90 bp AGAAGGGGAGGTCCTGATATTTCATTTACTCCAGCGTACCTGCCATaGACAGTAGTAGATTTGATAATATCCCCAGGTAGGACCACTGAG +
Preference number: 5 (lower is better)
Translates to: RRGGPDISFTPAYLP*TVVDLIISPGRTTE
Trigger: CTCAGTGGTCCTACCTGGGGATATTATCAAATCTACTACTGTTCATGGCAGGTACGCTGGAGTAAATGAAATATCAGGACCTCCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000480873.1
ENST00000483743.6
ENST00000496396.1
CDS GCA 90 bp GTGCCCAGTACCGAATTAAGTCATTCCTCTGCTCCTCTATTCAAATaGCCTGAAGAATCATGCTTCCTGCACCATCACTGTGCTTATCTT +
Preference number: 5 (lower is better)
Translates to: VPSTELSHSSAPLFK*PEESCFLHHHCAYL
Trigger: AAGATAAGCACAGTGATGGTGCAGGAAGCATGATTCTTCAGGGCATTTGAATAGAGGAGCAGAGGAATGACTTAATTCGGTACTGGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CCA 90 bp TGTTCTCAGGTTAGGCTTCGGTTTAAGGTTTGGCAGTGGCTCTTCTaGGCTTTCAGAAATAGCAGAATCTTCTGTTTGGATGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: CSQVRLRFKVWQWLF*AFRNSRIFCLDGSF
Trigger: GAAACTGCCATCCAAACAGAAGATTCTGCTATTTCTGAAAGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAGCCTAACCTGAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCGTGGTGCCTTGGCTTTaGGTTTTCTCCTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIVVPWL*VFSWLG
Trigger: CCCCAGCCAGGAGAAAACCAAAAGCCAAGGCACCAC...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACTGACAACAGATCGATaGTGTAACTTGATGGATTTA +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRLTTDR*CNLMDL
Trigger: TAAATCCATCAAGTTACACAATCGATCTGTTGTCAG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAAGGTGCTTTTCGCTTaGTCCTTCTCAAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAKVLFA*SFSKMN
Trigger: ATTCATCTTTGAGAAGGACAAAGCGAAAAGCACCTT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CAGTGCACTGCTCCTGACTGGAAAGCCCAGGGTGAAAGGTTTCACTTAAAGATGAAGGTGCTTTTCGCTTaGTCCTTCTCAAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: QCTAPDWKAQGERFHLKMKVLFA*SFSKMN
Trigger: ATTCATCTTTGAGAAGGACAAAGCGAAAAGCACCTT...CATCTTTAAGTGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAAACTCTCCACTACCATaGCCAAGGGCTGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLNSPLP*PRAESG
Trigger: TCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGTT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCAACTCTCCACTACCATaGCCAAGGGCTGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPNSPLP*PRAESG
Trigger: TCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGTT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACCTTCTTTCCATTGCTaGTATCATATACTACACTGT +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRPSFHC*YHILHC
Trigger: ACAGTGTAGTATATGATACAAGCAATGGAAAGAAGG...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTAAGGGGTTGTCTGAATaGCTGCATCTTTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAKGLSE*LHLLSF
Trigger: AAAAGACAAAAGATGCAGCAATTCAGACAACCCCTT...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGAAGCAGTGGAATTTTaGTCAATCCTATCTACAGGA +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAEAVEF*SILSTG
Trigger: TCCTGTAGATAGGATTGACAAAAATTCCACTGCTTC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGTAGTCATGCCAATTTaGGGTATATACTCTCGTGTA +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAVVMPI*GIYSRV
Trigger: TACACGAGAGTATATACCCAAAATTGGCATGACTAC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTTTTCTGCCTCTTTATTaGTCAGTTCTTTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAFLPLY*SVLLEQ
Trigger: CTGCTCCAAAAGAACTGACAAATAAAGAGGCAGAAA...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATTTTTCAACAAGGGGTaGTGGAACAGAGTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQFFNKG*WNRVRH
Trigger: ATGCCTCACTCTGTTCCACAACCCCTTGTTGAAAAA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AAAGTAGGGACAGAACACCAACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGAAGTTGGAGTTGGTATTaGGGAATTCTGTTCATTATG +
Preference number: 5 (lower is better)
Translates to: KVGTEHQQALDSGRAVSRSWSWY*GILFIM
Trigger: CATAATGAACAGAATTCCCAAATACCAACTCCAACT...TCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGTTGGTGTTCTGTCCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTGCCGACAAATGGGCATaGTTTTGCTTAACAGTTTTA +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAADKWA*FCLTVL
Trigger: TAAAACTGTTAAGCAAAACAATGCCCATTTGTCGGC...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATCAATTCAGTCTTTCTaGGTTCCCACAGGTAACCAC +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQSIQSF*VPTGNH
Trigger: GTGGTTACCTGTGGGAACCAAGAAAGACTGAATTGA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCATGAAAGTCAAAAGTaGGTTCTAGACCATTCCTGT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAHESQK*VLDHSC
Trigger: ACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS TCA 90 bp TTTCTGTTCCATGATGAAAGCAGTGGATTCTACAGAATCAGCAGCTaGAGAGACATCAGTATATTTGGTCTCAGCTGGAGGAAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: FLFHDESSGFYRISS*RDISIFGLSWRKWC
Trigger: GCACCACTTCCTCCAGCTGAGACCAAATATACTGATGTCTCTTCAGCTGCTGATTCTGTAGAATCCACTGCTTTCATCATGGAACAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000414843.5
ENST00000434366.5
ENST00000439313.5
ENST00000444537.5
ENST00000445474.2
ENST00000448708.5
ENST00000452626.5
ENST00000456171.5
ENST00000480873.1
ENST00000483743.6
ENST00000493921.1
ENST00000496396.1
ENST00000629362.2
ENST00000652658.2
CDS GCA 90 bp ATTCCTCTGCTCCTCTATTCAAATGCCCTGAAGAATCATGCTTCCTaGACCATCACTGTGCTTATCTTCAAAACCCTAGTGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: IPLLLYSNALKNHAS*TITVLIFKTLVAFS
Trigger: TGAAAAGGCCACTAGGGTTTTGAAGATAAGCACAGTGATGGTGCAGGAAGCATGATTCTTCAGGGCATTTGAATAGAGGAGCAGAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS GCA 90 bp TTAAGTCATTCCTCTGCTCCTCTATTCAAATGCCCTGAAGAATCATaGTTCCTGCACCATCACTGTGCTTATCTTCAAAACCCTAGTGGC +
Preference number: 5 (lower is better)
Translates to: LSHSSAPLFKCPEES*FLHHHCAYLQNPSG
Trigger: GCCACTAGGGTTTTGAAGATAAGCACAGTGATGGTGCAGGAAGCATGATTCTTCAGGGCATTTGAATAGAGGAGCAGAGGAATGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CCA 90 bp TTGATGCTCTGTTCTCAGGTTAGGCTTCGGTTTAAGGTTTGGCAGTaGCTCTTCTGGGCTTTCAGAAATAGCAGAATCTTCTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LMLCSQVRLRFKVWQ*LFWAFRNSRIFCLD
Trigger: ATCCAAACAGAAGATTCTGCTATTTCTGAAAGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAGCCTAACCTGAGAACAGAGCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp CACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTATTATATGATGTGTGCAAGGTCTaGGGGGACACTCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: HYHCQGLSQDHFSVYLLYDVCKV*GDTLRC
Trigger: GCATCTCAGAGTGTCCCCCAAGACCTTGCACACATC...ATATAATAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCGATGTGTGCAAGGTCTaGGGGGACACTCTGAGATGC +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIDVCKV*GDTLRC
Trigger: GCATCTCAGAGTGTCCCCCAAGACCTTGCACACATC...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCCTTCTTTCCATTGCTaGTATCATATACTACACTGT +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAPSFHC*YHILHC
Trigger: ACAGTGTAGTATATGATACAAGCAATGGAAAGAAGG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCACAGAACTGGGCACTaGATGCTCTGTTCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPHRTGH*MLCSQV
Trigger: AACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGTG...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTGTGTTGGCTGGAGGTaGGACCAATGCACTGGCACT +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFICVGWR*DQCTGT
Trigger: AGTGCCAGTGCATTGGTCCAACCTCCAGCCAACACA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGGCCATCAGTTGGAGTaGGTATTTGGGAATTCTGTT +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFGHQLE*VFGNSV
Trigger: AACAGAATTCCCAAATACCAACTCCAACTGATGGCC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCCTCTCCCGAACGGATaGCAGTCAGCAAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFPLPNG*QSANSV
Trigger: GACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCGTAACCCTTTTCAATTaGGCAGCAGCCTCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPVTLFN*AAASPE
Trigger: TTCGGGAGAGGCTGCTGCCAAATTGAAAAGGGTTAC...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAGGCTCTAGACTCCGGAAGAGCTGTAAGCCGACAAATGGGCATTGTTTTGCTCAAATGGGCATTGTTTaGCTTAACAGTTTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: TGSRLRKSCKPTNGHCFAQMGIV*LNSFSF
Trigger: GAAGCTAAAACTGTTAAGCAAAACAATGCCCATTTG...AGCAAAACAATGCCCATTTGTCGGCTTACAGCTCTTCCGGAGTCTAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000652658.2
CDS-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCATTGAACTACATTCTCTaGGTTTGGGCCCAACGACTT +
Preference number: 5 (lower is better)
Translates to: YGCKRERIEAITMPIAIALNYIL*VWAQRL
Trigger: AAGTCGTTGGGCCCAAACCAAGAGAATGTAGTTCAA...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAACTATTCTGGTATCCCTaGAAATCTAGCACCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQLFWYP*KSSTSF
Trigger: GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAG...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS TCA 90 bp AACGGATCAAACTCACATTTGCTACATATAATAGGGGCAAGCTCTTaGAGCGATGCATGTGGACTCACTCTCACTATGGTCTTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: NGSNSHLLHIIGASS*SDACGLTLTMVFCV
Trigger: AACACAGAAGACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATTATATGTAGCAAATGTGAGTTTGATCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000452626.5
ENST00000456171.5
ENST00000456693.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 90 bp ATTGCAGTCAGCAAACTCTGTCGCATCTGTTCTGGGTCAGAGCTTTaGAATGTTAAAGAACTTTGTCTCATAACAGTGAATGATGGGCCA +
Preference number: 5 (lower is better)
Translates to: IAVSKLCRICSGSEL*NVKELCLITVNDGP
Trigger: TGGCCCATCATTCACTGTTATGAGACAAAGTTCTTTAACATTCCAAAGCTCTGACCCAGAACAGATGCGACAGAGTTTGCTGACTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000495084.1
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAAGGATCAAACTCACATTaGCTACATATAATAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQGSNSH*LHIIGA
Trigger: TGCCCCTATTATATGTAGCAAATGTGAGTTTGATCC...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGGTTTGGAAATGGTATaGGACCTTGTAAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: YGCKRERIEAITMPIAIAGLEMV*DLVKVG
Trigger: CCCAACTTTTACAAGGTCCAATACCATTTCCAAACC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTATTATATAACTCTCCACTACCATaGCCAAGGGCTGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: HYHCQGLSQDHFSVYLLYNSPLP*PRAESG
Trigger: TCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGTT...ATATAATAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTACATGTGCCTCAGAGTTaGATGGTCTCTCAACTTCCA +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLHVPQS*MVSQLP
Trigger: TGGAAGTTGAGAGACCATCAAACTCTGAGGCACATG...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTTCCCTTCCTCTGTGTaGGCTGGAGGTTGGACCAAT +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIFPSSV*AGGWTN
Trigger: ATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGAA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCAGAGTGTGTATGCTGTaGCCAGTGCCTAGTGGCCAA +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFRVCML*PVPSGQ
Trigger: TTGGCCACTAGGCACTGGCAACAGCATACACACTCT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATCTCATTTCAAGGACTaGGATAAGATGACAGAGTGT +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQSHFKD*DKMTEC
Trigger: ACACTCTGTCATCTTATCCAAGTCCTTGAAATGAGA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS TCA 90 bp CAGTACCGAATTAAGTCATTCCTCTGCTCCTCTATTCAAATGCCCTaGAGAATCATGCTTCCTGCACCATCACTGTGCTTATCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: QYRIKSFLCSSIQMP*RIMLPAPSLCLSSK
Trigger: TTTTGAAGATAAGCACAGTGATGGTGCAGGAAGCATGATTCTTCAGGGCATTTGAATAGAGGAGCAGAGGAATGACTTAATTCGGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGAGACATCAGTATATTaGGTCTCAGCTGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLETSVY*VSAGGS
Trigger: ACTTCCTCCAGCTGAGACCAAATATACTGATGTCTC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCAATAGGGGCAAGCTCTaGAAGCGATGCATGTGGACT +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFNRGKL*KRCMWT
Trigger: AGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGGATCAAACTCACATTaGCTACATATAATAGGGGCA +
Preference number: 5 (lower is better)
Translates to: YGCKRERIEAITMPIAIAGSNSH*LHIIGA
Trigger: TGCCCCTATTATATGTAGCAAATGTGAGTTTGATCC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTGGCAGGACTCTCTGTaGACATCCATCGCATATAAT +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPWQDSL*TSIAYN
Trigger: ATTATATGCGATGGATGTCAACAGAGAGTCCTGCCA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAAAGGTGCTTTTCGCTTaGTCCTTCTCAAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: YGCKRERIEAITMPIAIAKVLFA*SFSKMN
Trigger: ATTCATCTTTGAGAAGGACAAAGCGAAAAGCACCTT...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTGAAGCAGTGGAATTTTaGTCAATCCTATCTACAGGA +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFEAVEF*SILSTG
Trigger: TCCTGTAGATAGGATTGACAAAAATTCCACTGCTTC...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCTGTGCCAGTGTCTCTaGTCATTTTGGGAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFLCQCL*SFWEQV
Trigger: AACCTGCTCCCAAAATGACAAGAGACACTGGCACAG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTTTTTCAACAAGGGGTaGTGGAACAGAGTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPFFNKG*WNRVRH
Trigger: ATGCCTCACTCTGTTCCACAACCCCTTGTTGAAAAA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCATGATGGGCCATCAGTaGGAGTTGGTATTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPMMGHQ*ELVFGN
Trigger: ATTCCCAAATACCAACTCCAACTGATGGCCCATCAT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCGTAACCCTTTTCAATTaGGCAGCAGCCTCTCCCGAA +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFVTLFN*AAASPE
Trigger: TTCGGGAGAGGCTGCTGCCAAATTGAAAAGGGTTAC...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCAGCCGACAAATGGGCATaGTTTTGCTTAACAGTTTTA +
Preference number: 5 (lower is better)
Translates to: YGCKRERIEAITMPIAIAADKWA*FCLTVL
Trigger: TAAAACTGTTAAGCAAAACAATGCCCATTTGTCGGC...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTACTACATTCTCTTGGTTaGGGCCCAACGACTTCAAGT +
Preference number: 5 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLLHSLG*GPTTSS
Trigger: ACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTAG...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATTGAACTACATTCTCTaGGTTTGGGCCCAACGACTT +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLNYIL*VWAQRL
Trigger: AAGTCGTTGGGCCCAAACCAAGAGAATGTAGTTCAA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCATCTTACATGTCGCTaGTCTTTAAGTCTTCAATCC +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFHLTCR*SLSLQS
Trigger: GGATTGAAGACTTAAAGACAAGCGACATGTAAGATG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATCAATTCAGTCTTTCTaGGTTCCCACAGGTAACCAC +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLSIQSF*VPTGNH
Trigger: GTGGTTACCTGTGGGAACCAAGAAAGACTGAATTGA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCATGAAAGTCAAAAGTaGGTTCTAGACCATTCCTGT +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFHESQK*VLDHSC
Trigger: ACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGAACCCCAATCTCTTCACTCCAGCCAACATTATGTACCGCAGCAAGAAACAATGGGGTAAGCATTTATaGCTTACACATCAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LNPNLFTPANIMYRSKKQWGKHL*LTHQSK
Trigger: TTTACTCTGATGTGTAAGCAATAAATGCTTACCCCA...TTGTTTCTTGCTGCGGTACATAATGTTGGCTGGAGTGAAGAGATTGGGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTCTGACAACAGATCGATaGTGTAACTTGATGGATTTA +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFLTTDR*CNLMDL
Trigger: TAAATCCATCAAGTTACACAATCGATCTGTTGTCAG...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCAGGGGCACTTGCAGTTaGGTCTCGCTTTTTCTTACT +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFRGTCS*VSLFLT
Trigger: AGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCCCT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGGTTTGGAAATGGTATaGGACCTTGTAAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLGLEMV*DLVKVG
Trigger: CCCAACTTTTACAAGGTCCAATACCATTTCCAAACC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTCCGACGGCAGGGTGTaGGAAATATATGGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFISDGRV*EIYGLE
Trigger: TTCCAAACCATATATTTCCAACACCCTGCCGTCGGA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTCCGACGGCAGGGTGTaGGAAATATATGGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFSDGRV*EIYGLE
Trigger: TTCCAAACCATATATTTCCAACACCCTGCCGTCGGA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TATGGATGCAAGAGAGAAAGAATTGAGGCCATCACTATGCCTATCGCTATCGCACCTTCTTTCCATTGCTaGTATCATATACTACACTGT +
Preference number: 5 (lower is better)
Translates to: YGCKRERIEAITMPIAIAPSFHC*YHILHC
Trigger: ACAGTGTAGTATATGATACAAGCAATGGAAAGAAGG...TGCGATAGCGATAGGCATAGTGATGGCCTCAATTCTTTCTCTCTTGCATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCATGTGCCTCAGAGTTaGATGGTCTCTCAACTTCCA +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIHVPQS*MVSQLP
Trigger: TGGAAGTTGAGAGACCATCAAACTCTGAGGCACATG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTACTTTTCTGCACTGGGTaGATTCAGTTTTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLFCTG*IQFLIW
Trigger: CCAGATCAAAAACTGAATCAACCCAGTGCAGAAAAG...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CTGGGCCTGCTCACTTCTATTACTCATATGGCAGATTCTGCTTCTTCCTTCTTTTCATATGTGTATGGTTaGTTTAACAGGGTGTATTGC +
Preference number: 5 (lower is better)
Translates to: LGLLTSITHMADSASSFFSYVYG*FNRVYC
Trigger: GCAATACACCCTGTTAAACAAACCATACACATATGA...AAAGAAGGAAGAAGCAGAATCTGCCATATGAGTAATAGAAGTGAGCAGGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS TCA 90 bp ATTTGGCCTCTATCTGTCAGAAGAACAAATGGGAAACACATTAATTaGACTTCTGTCCTCACAATGCAAGTCTCAAAGAGCATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: IWPLSVRRTNGKHIN*TSVLTMQVSKSICH
Trigger: ATGGCAGATGCTCTTTGAGACTTGCATTGTGAGGACAGAAGTTCAATTAATGTGTTTCCCATTTGTTCTTCTGACAGATAGAGGCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495084.1
CDS GCA 90 bp AAACTCACATTTGCTACATATAATAGGGGCAAGCTCTTGAAGCGATaGATGTGGACTCACTCTCACTATGGTCTTCTGTGTTTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: KLTFATYNRGKLLKR*MWTHSHYGLLCFLK
Trigger: TTTAAGAAAACACAGAAGACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATTATATGTAGCAAATGTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000452626.5
ENST00000456171.5
ENST00000456693.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 90 bp CCAACGACTTCAAGTTTCTTATACTGTCAACTACCTTCTTTCCATTaGTTGTATCATATACTACACTGTGTGGTTCTTGTCCATCTGTGC +
Preference number: 5 (lower is better)
Translates to: PTTSSFLYCQLPSFH*LYHILHCVVLVHLC
Trigger: GCACAGATGGACAAGAACCACACAGTGTAGTATATGATACAAGCAATGGAAAGAAGGTAGTTGACAGTATAAGAAACTTGAAGTCGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCGAGACATCAGTATATTaGGTCTCAGCTGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFETSVY*VSAGGS
Trigger: ACTTCCTCCAGCTGAGACCAAATATACTGATGTCTC...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACTCTCCACTACCATTGCCAAGGGCTGAGTCAGGATCATTTTTCAGTGTATTTACTGACAACAGATCGATaGTGTAACTTGATGGATTTA +
Preference number: 5 (lower is better)
Translates to: TLHYHCQGLSQDHFSVYLLTTDR*CNLMDL
Trigger: TAAATCCATCAAGTTACACAATCGATCTGTTGTCAG...TAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTGGCAGGACTCTCTGTaGACATCCATCGCATATAAT +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIWQDSL*TSIAYN
Trigger: ATTATATGCGATGGATGTCAACAGAGAGTCCTGCCA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAAAGGGGTTGTCTGAATaGCTGCATCTTTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLKGLSE*LHLLSF
Trigger: AAAAGACAAAAGATGCAGCAATTCAGACAACCCCTT...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTAGTAGTCATGCCAATTTaGGGTATATACTCTCGTGTA +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLVVMPI*GIYSRV
Trigger: TACACGAGAGTATATACCCAAAATTGGCATGACTAC...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTCCGTTTTTGCTAATTaGATGTGGTACCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPSVFAN*MWYLSM
Trigger: CATGGAAAGGTACCACATCAAATTAGCAAAAACGGA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTCTCATTTCAAGGACTaGGATAAGATGACAGAGTGT +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPSHFKD*DKMTEC
Trigger: ACACTCTGTCATCTTATCCAAGTCCTTGAAATGAGA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAGTCTCAGGACAAAGATaGGTCTCATTTCAAGGACTT +
Preference number: 5 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLVSGQR*VSFQGL
Trigger: AAGTCCTTGAAATGAGACCAATCTTTGTCCTGAGAC...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp AATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCTTTCTGCTGTTTTATTATTTTCTGATCCCTaGAAGGTATCCAAAACCCAC +
Preference number: 5 (lower is better)
Translates to: NICITKAEHGLGPLSAVLLFSDP*KVSKTH
Trigger: GTGGGTTTTGGATACCTTCAAGGGATCAGAAAATAA...TAAAACAGCAGAAAGGGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCTTATTTTCTGATCCCTaGAAGGTATCCAAAACCCAC +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPLFSDP*KVSKTH
Trigger: GTGGGTTTTGGATACCTTCAAGGGATCAGAAAATAA...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS TCA 90 bp TCTTTTACGGTAAGCGGATCTTCTGAATGTATAATTAGGGTGCCTTaGCTCCTGAATTCCCTTGAGGTATTTACAGAATCTTGTGAACTT +
Preference number: 5 (lower is better)
Translates to: SFTVSGSSECIIRVP*LLNSLEVFTESCEL
Trigger: AAGTTCACAAGATTCTGTAAATACCTCAAGGGAATTCAGGAGTCAAGGCACCCTAATTATACATTCAGAAGATCCGCTTACCGTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 90 bp TTTCCTTTTCCATATGGTTCAGTAATTTGCTTTCTAAAGAACGTATaGATAGTGGGAGTAAACAAGACACCAAGAGGTACCTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FPFPYGSVICFLKNV*IVGVNKTPRGTFSS
Trigger: AGAGGAGAAGGTACCTCTTGGTGTCTTGTTTACTCCCACTATGCATACGTTCTTTAGAAAGCAAATTACTGAACCATATGGAAAAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493921.1
CDS CCA 90 bp TGTCTCATAACAGTGAATGATGGGCCATCAGTTGGAGTTGGTATTTaGGAATTCTGTTCATTATGTGCAGAGTTATTTTCCTTATCAGAC +
Preference number: 5 (lower is better)
Translates to: CLITVNDGPSVGVGI*EFCSLCAELFSLSD
Trigger: GTCTGATAAGGAAAATAACTCTGCACATAATGAACAGAATTCCCAAATACCAACTCCAACTGATGGCCCATCATTCACTGTTATGAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTACACTGTGTGGTTCTaGTCCATCTGTGCTTTTAGT +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIYTVWF*SICAFS
Trigger: ACTAAAAGCACAGATGGACAAGAACCACACAGTGTA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATTTCTGCCTCTTTATTaGTCAGTTCTTTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLFLPLY*SVLLEQ
Trigger: CTGCTCCAAAAGAACTGACAAATAAAGAGGCAGAAA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCCAAATGGGCATTGTTTaGCTTAACAGTTTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPQMGIV*LNSFSF
Trigger: GAAGCTAAAACTGTTAAGCAAAACAATGCCCATTTG...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTTCCACCACTCACTCTaGTCACTTGTTTTTGAGATG +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFIFHHSL*SLVFEM
Trigger: CATCTCAAAAACAAGTGACAAGAGTGAGTGGTGGAA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp GAAGTCTATCATATGAATATATGCATTACTAAAGCTGAGCACGGGTTAGGACCCATGAGTGAAAACTACTaGTCACAAATTTCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: EVYHMNICITKAEHGLGPMSENY*SQISFP
Trigger: GGGGAAAGAAATTTGTGACAAGTAGTTTTCACTCAT...GGGTCCTAACCCGTGCTCAGCTTTAGTAATGCATATATTCATATGATAGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCCTATTCTGGTATCCCTaGAAATCTAGCACCAGTTTC +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFILFWYP*KSSTSF
Trigger: GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAG...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGAACAGAAGTGGCTCTGTaGACATCCATCGCATATAAT +
Preference number: 5 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRTEVAL*TSIAYN
Trigger: ATTATATGCGATGGATGTCAACAGAGCCACTTCTGT...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS TCA 90 bp AGTAGTCATGCCAATTTTGGGTATATACTCTCGTGTAATTTCATTTaGAGGTTTTGGCTTGGGATTGTAGTCCTGTCTATAAAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: SSHANFGYILSCNFI*RFWLGIVVLSIKWV
Trigger: TACCCACTTTATAGACAGGACTACAATCCCAAGCCAAAACCTTCAAATGAAATTACACGAGAGTATATACCCAAAATTGGCATGACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 90 bp ATTTCTTCTCAACATTTCATGATCATTTCCAGTGATTGGCAGTCCTaGAAACCCAGAATCCATCCTCATATACAACTGACAATGATGTTA +
Preference number: 5 (lower is better)
Translates to: ISSQHFMIISSDWQS*KPRIHPHIQLTMML
Trigger: TAACATCATTGTCAGTTGTATATGAGGATGGATTCTGGGTTTCCAGGACTGCCAATCACTGGAAATGATCATGAAATGTTGAGAAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS-3UTR CAA 90 bp CAGTTCTTCCTTTTCATCTATCTCTTCAAGGCTATAATCAGAGCTTATTCCAGAGGATCAAACTCACATTaGCTACATATAATAGGGGCA +
Preference number: 5 (lower is better)
Translates to: QFFLFIYLFKAIIRAYSRGSNSH*LHIIGA
Trigger: TGCCCCTATTATATGTAGCAAATGTGAGTTTGATCC...TCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCAAGGTGCTTTTCGCTTaGTCCTTCTCAAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFKVLFA*SFSKMN
Trigger: ATTCATCTTTGAGAAGGACAAAGCGAAAAGCACCTT...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTAAGTTGGAGTTGGTATTaGGGAATTCTGTTCATTATG +
Preference number: 5 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLSWSWY*GILFIM
Trigger: CATAATGAACAGAATTCCCAAATACCAACTCCAACT...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp ACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTTCATCTCCGTTTTTGCTAATTaGATGTGGTACCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: TNNFLFWYPLKSSTSFFISVFAN*MWYLSM
Trigger: CATGGAAAGGTACCACATCAAATTAGCAAAAACGGA...GATGAAGAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp CATGAAAGTCAAAAGTTGGTTCTAGACCATTCCTGTATCTTCCTTGTGCTGTTATGGGGTAAGCATTTATaGCTTACACATCAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: HESQKLVLDHSCIFLVLLWGKHL*LTHQSK
Trigger: TTTACTCTGATGTGTAAGCAATAAATGCTTACCCCA...TAACAGCACAAGGAAGATACAGGAATGGTCTAGAACCAACTTTTGACTTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS GCA 90 bp AGACCCATGTTCTTAGGAACCATAGAAGAGGCACATTTCTGCCTCTaGTCTCAATTTACTTGGTTCATAAGTATTTTTCAATGTTCATAT +
Preference number: 5 (lower is better)
Translates to: RPMFLGTIEEAHFCL*SQFTWFISIFQCSY
Trigger: ATATGAACATTGAAAAATACTTATGAACCAAGTAAATTGAGAGCAGAGGCAGAAATGTGCCTCTTCTATGGTTCCTAAGAACATGGGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CCA 90 bp TGTAGTCCTGTCTATAAAGTGGGTAATTCTTTAGGTAAGAAGCAGTaGAATTTTTGTCAATCCTATCTACAGGAGGCAAAAGATCATCAT +
Preference number: 5 (lower is better)
Translates to: CSPVYKVGNSLGKKQ*NFCQSYLQEAKDHH
Trigger: ATGATGATCTTTTGCCTCCTGTAGATAGGATTGACAAAAATTCCACTGCTTCTTACCTAAAGAATTACCCACTTTATAGACAGGACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 90 bp TCACATATGGCAATAGTTTGCACAGCACAAGTTAAATGTGAGCCTTaGGGGTCAAACTGTGAAATTATGTCAAGTTATTTCTCTATAGTT +
Preference number: 5 (lower is better)
Translates to: SHMAIVCTAQVKCEP*GSNCEIMSSYFSIV
Trigger: AACTATAGAGAAATAACTTGACATAATTTCACAGTTTGACCCCCAAGGCTCACATTTAACTTGTGCTGTGCAAACTATTGCCATATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCCTGACAACAGATCGATaGTGTAACTTGATGGATTTA +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFLTTDR*CNLMDL
Trigger: TAAATCCATCAAGTTACACAATCGATCTGTTGTCAG...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS-3UTR CAA 90 bp TTCAGAACAAATAACTTCCTATTCTGGTATCCCTTGAAATCTAGCACCAGTTTCTCATATGTGTATGGTTaGTTTAACAGGGTGTATTGC +
Preference number: 5 (lower is better)
Translates to: FRTNNFLFWYPLKSSTSFSYVYG*FNRVYC
Trigger: GCAATACACCCTGTTAAACAAACCATACACATATGA...GAAACTGGTGCTAGATTTCAAGGGATACCAGAATAGGAAGTTATTTGTTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375458.6
ENST00000652658.2
CDS CCA 72 bp GCTCGCCGCCGCCTCTGCAGCACGGCCGCACATAAGTaGGGACCAGCTCGGCGGCATTGGAGCGAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: ARRRLCSTAAHK*GPARRHWSEGS
Trigger: GCTTCCCTCGCTCCAATGCCGCCGAGCTGGTCCCCACTTATGTGCGGCCGTGCTGCAGAGGCGGCGGCGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409184.8
ENST00000445474.2
ENST00000456693.5
ENST00000483743.6
ENST00000496396.1
ENST00000629362.2
CDS CAA 72 bp CGGCGCGTCACTGCTTGCCAGGATCCGCGGGGAGGATaGGGGCCTCCGCGGAATGCGGTCAGAAACTCGCAG +
Preference number: 6 (lower is better)
Translates to: RRVTACQDPRGG*GPPRNAVRNSQ
Trigger: CTGCGAGTTTCTGACCGCATTCCGCGGAGGCCCCAATCCTCCCCGCGGATCCTGGCAAGCAGTGACGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491126.6
CDS TCA 72 bp CCCGCGCTCTTGCCGCTCGGCTCTCAAGCCAGGACTTaGATGGAGAAGCGGCAACCCCTGCGAGGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: PALLPLGSQART*MEKRQPLRGSA
Trigger: GGCTGAGCCTCGCAGGGGTTGCCGCTTCTCCATTCAAGTCCTGGCTTGAGAGCCGAGCGGCAAGAGCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496396.1
CDS GCA 72 bp CTCAAGCCAGGACTTGAATGGAGAAGCGGCAACCCCTaGGAGGCTCAGCCCAGCGCGGGCAGGGCCGACTCA +
Preference number: 6 (lower is better)
Translates to: LKPGLEWRSGNP*EAQPSAGRADS
Trigger: TGAGTCGGCCCTGCCCGCGCTGGGCTGAGCCTCGCAGGGGTTGCCGCTTCTCCATTCAAGTCCTGGCTTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496396.1
CDS CCA 72 bp GGCGCGTCACTGCTTGCCAGGATCCGCGGGGAGGATTaGGGCCTCCGCGGAATGCGGTCAGAAACTCGCAGA +
Preference number: 6 (lower is better)
Translates to: GASLLARIRGED*GLRGMRSETRR
Trigger: TCTGCGAGTTTCTGACCGCATTCCGCGGAGGCCCCAATCCTCCCCGCGGATCCTGGCAAGCAGTGACGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491126.6
CDS CAA 72 bp GCCCGCGCTCTTGCCGCTCGGCTCTCAAGCCAGGACTaGAATGGAGAAGCGGCAACCCCTGCGAGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: ARALAARLSSQD*NGEAATPARLS
Trigger: GCTGAGCCTCGCAGGGGTTGCCGCTTCTCCATTCAAGTCCTGGCTTGAGAGCCGAGCGGCAAGAGCGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496396.1
CDS CCA 72 bp CGCTCTTGCCGCTCGGCTCTCAAGCCAGGACTTGAATaGAGAAGCGGCAACCCCTGCGAGGCTCAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: RSCRSALKPGLE*RSGNPCEAQPS
Trigger: GCTGGGCTGAGCCTCGCAGGGGTTGCCGCTTCTCCATTCAAGTCCTGGCTTGAGAGCCGAGCGGCAAGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496396.1
CDS TCA 72 bp CTCTCCTGGATGTGTGCAAGGTCTTGGGGGACACTCTaGGATGCTGGCATCGGGGGCAGTGGAGCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: LSWMCARSWGTL*DAGIGGSGARL
Trigger: GAGGCGGGCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGACCTTGCACACATCCAGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp TCCTCTCCTACTCTTCCCTTCCCCGGCCCGCGCTCTTaGCGCTCGGCTCTCAAGCCAGGACTTGAATGGAGA +
Preference number: 6 (lower is better)
Translates to: SSPTLPFPGPRS*RSALKPGLEWR
Trigger: TCTCCATTCAAGTCCTGGCTTGAGAGCCGAGCGGCAAGAGCGCGGGCCGGGGAAGGGAAGAGTAGGAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414843.5
ENST00000496396.1
CDS CCA 72 bp ATGCTGGCATCGGGGGCAGTGGAGCCCGCCTCTTCTTaGGTGCATCCGACGGCAGGGTGTTGGAAATATATG +
Preference number: 6 (lower is better)
Translates to: MLASGAVEPASS*VHPTAGCWKYM
Trigger: CATATATTTCCAACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 72 bp GATGCTGGCATCGGGGGCAGTGGAGCCCGCCTCTTCTaGGGTGCATCCGACGGCAGGGTGTTGGAAATATAT +
Preference number: 6 (lower is better)
Translates to: DAGIGGSGARLF*GASDGRVLEIY
Trigger: ATATATTTCCAACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp TTTCACTATACAAGAAGCAGGCCTCTCCTGGATGTGTGCAAGGTCTaGGGGGACACTCTGAGATGCTGGCATCGGGGGCAGTGGAGCCCG +
Preference number: 6 (lower is better)
Translates to: FHYTRSRPLLDVCKV*GDTLRCWHRGQWSP
Trigger: CGGGCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCCCAAGACCTTGCACACATCCAGGAGAGGCCTGCTTCTTGTATAGTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp TGGCATCGGGGGCAGTGGAGCCCGCCTCTTCTTGGGTaGATCCGACGGCAGGGTGTTGGAAATATATGGTTT +
Preference number: 6 (lower is better)
Translates to: WHRGQWSPPLLG*IRRQGVGNIWF
Trigger: AAACCATATATTTCCAACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 72 bp CCTCCATCAGTTTGGGCGCAGTGCACTGCTCCTGACTaGAAAGCCCAGGGTGAAAGGTTTCTGGGCTGGATA +
Preference number: 6 (lower is better)
Translates to: PPSVWAQCTAPD*KAQGERFLGWI
Trigger: TATCCAGCCCAGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTGCGCCCAAACTGATGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342193.8
ENST00000629362.2
CDS CCA 72 bp AAGTTGGAATTTCCTTCCCCCAGGGCTTCGGGTCTTTaGGGTCCGGCTGGGGAAGCTGAACCGAAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: KLEFPSPRASGL*GPAGEAEPKES
Trigger: GCTTTCTTTCGGTTCAGCTTCCCCAGCCGGACCCCAAAGACCCGAAGCCCTGGGGGAAGGAAATTCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445474.2
ENST00000483743.6
CDS CAA 90 bp GCCCAGGGTGAAAGGTTTCTGGGCTGGATAGCTCCTCAGGAGAGTTaGCTTCTGAAGCACTGTCTGGAGGAACTCCATCTACTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: AQGERFLGWIAPQES*LLKHCLEELHLLAV
Trigger: TACAGCCAGTAGATGGAGTTCCTCCAGACAGTGCTTCAGAAGCAAACTCTCCTGAGGAGCTATCCAGCCCAGAAACCTTTCACCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342193.8
ENST00000629362.2
CDS TCA 72 bp TGCAGTGAGCCAAGCTCGCATCATTGCACTCGAGCCTaGGTAACAAGAGCGAAAGAGCCAAGCTCGCATCAT +
Preference number: 6 (lower is better)
Translates to: CSEPSSHHCTRA*VTRAKEPSSHH
Trigger: ATGATGCGAGCTTGGCTCTTTCGCTCTTGTTACTCAGGCTCGAGTGCAATGATGCGAGCTTGGCTCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493921.1
CDS GCA 72 bp CTCAAAGATGAATTCCCTGCAGACATGCTGCTGAGCTaGAGTGAACCTGCCCTCACTCTTCCTGCTTCACAG +
Preference number: 6 (lower is better)
Translates to: LKDEFPADMLLS*SEPALTLPASQ
Trigger: CTGTGAAGCAGGAAGAGTGAGGGCAGGTTCACTGCAGCTCAGCAGCATGTCTGCAGGGAATTCATCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000434366.5
ENST00000456171.5
ENST00000460238.1
ENST00000491126.6
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp CCTTTTCAATTTGGCAGCAGCCTCTCCCGAACGGATTaGAGTCAGCAAACTCTGTCGCATCTGTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PFQFGSSLSRTD*SQQTLSHLFWV
Trigger: GACCCAGAACAGATGCGACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGGCTGCTGCCAAATTGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000495084.1
ENST00000629362.2
ENST00000652658.2
CDS CCA 72 bp AGCACTGGCAGGAGGCATGTGGAAGGAAACAGGGTTTaGAGTCTGCACCATGTGCCCAGTACCGAATTAAGT +
Preference number: 6 (lower is better)
Translates to: STGRRHVEGNRV*SLHHVPSTELS
Trigger: ACTTAATTCGGTACTGGGCACATGGTGCAGACTCCAAACCCTGTTTCCTTCCACATGCCTCCTGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CAA 72 bp CCCTTTTCAATTTGGCAGCAGCCTCTCCCGAACGGATaGCAGTCAGCAAACTCTGTCGCATCTGTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: PFSIWQQPLPNG*QSANSVASVLG
Trigger: ACCCAGAACAGATGCGACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGGCTGCTGCCAAATTGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000495084.1
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp CATCAGTATATTTGGTCTCAGCTGGAGGAAGTGGTGCCTTGGCTTTaGGTTTTCTCCATGACCCAGCAATCTCTCTCCTGGCTGGGGCGT +
Preference number: 6 (lower is better)
Translates to: HQYIWSQLEEVVPWL*VFSMTQQSLSWLGR
Trigger: ACGCCCCAGCCAGGAGAGAGATTGCTGGGTCATGGAGAAAACCAAAAGCCAAGGCACCACTTCCTCCAGCTGAGACCAAATATACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445474.2
ENST00000629362.2
CDS CCA 72 bp CAACAGCTTCCAGTCAACAACATGATGGCAAAGCACTaGCAGGAGGCATGTGGAAGGAAACAGGGTTTGGAG +
Preference number: 6 (lower is better)
Translates to: QQLPVNNMMAKH*QEACGRKQGLE
Trigger: CTCCAAACCCTGTTTCCTTCCACATGCCTCCTGCCAGTGCTTTGCCATCATGTTGTTGACTGGAAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CAA 90 bp GGCAGTGGAGCCCGCCTCTTCTTGGGTGCATCCGACGGCAGGGTGTaGGAAATATATGGTTTGGAAATGGTATTGGACCTTGTAAAAGTT +
Preference number: 6 (lower is better)
Translates to: GSGARLFLGASDGRV*EIYGLEMVLDLVKV
Trigger: AACTTTTACAAGGTCCAATACCATTTCCAAACCATATATTTCCAACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp AATCAGAGCTTATTCCAGCTGGGCTGGATAGCTCCTCAGGAGAGTTaGCTTCTGAAGCACTGTCTGGAGGAACTCCATCTACTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: NQSLFQLGWIAPQES*LLKHCLEELHLLAV
Trigger: TACAGCCAGTAGATGGAGTTCCTCCAGACAGTGCTTCAGAAGCAAACTCTCCTGAGGAGCTATCCAGCCCAGCTGGAATAAGCTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375458.6
ENST00000409184.8
ENST00000460238.1
ENST00000491126.6
ENST00000493868.5
ENST00000652658.2
CDS CAA 90 bp GTTCCTCCTAAATGTTTCCTGGGCTGGATAGCTCCTCAGGAGAGTTaGCTTCTGAAGCACTGTCTGGAGGAACTCCATCTACTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: VPPKCFLGWIAPQES*LLKHCLEELHLLAV
Trigger: TACAGCCAGTAGATGGAGTTCCTCCAGACAGTGCTTCAGAAGCAAACTCTCCTGAGGAGCTATCCAGCCCAGGAAACATTTAGGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456171.5
CDS TCA 72 bp ATGGCATCATCAGGTGAGCTCACAGAACTGGGCACTTaGTGCTCTGTTCTCAGGTTAGGCTTCGGTTTAAGG +
Preference number: 6 (lower is better)
Translates to: MASSGELTELGT*CSVLRLGFGLR
Trigger: CCTTAAACCGAAGCCTAACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGTGAGCTCACCTGATGATGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS TCA 72 bp AGCAGGTTTCAGAGGACTAACCATGGCATCATCAGGTaGGCTCACAGAACTGGGCACTTGATGCTCTGTTCT +
Preference number: 6 (lower is better)
Translates to: SRFQRTNHGIIR*AHRTGHLMLCS
Trigger: AGAACAGAGCATCAAGTGCCCAGTTCTGTGAGCTCACCTGATGATGCCATGGTTAGTCCTCTGAAACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp GAAGAGACATCAGTATATTTGGTCTCAGCTGGAGGAAGTGGTGCCTaGGCTTTTGGTTTTCTCCATGACCCAGCAATCTCTCTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: EETSVYLVSAGGSGA*AFGFLHDPAISLLA
Trigger: AGCCAGGAGAGAGATTGCTGGGTCATGGAGAAAACCAAAAGCCAAGGCACCACTTCCTCCAGCTGAGACCAAATATACTGATGTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445474.2
ENST00000629362.2
CDS CAA 90 bp ATTATCCATCCCTTTTCAATTTGGCAGCAGCCTCTCCCGAACGGATaGCAGTCAGCAAACTCTGTCGCATCTGTTCTGGGTCAGAGCTTT +
Preference number: 6 (lower is better)
Translates to: IIHPFSIWQQPLPNG*QSANSVASVLGQSF
Trigger: AAAGCTCTGACCCAGAACAGATGCGACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGGCTGCTGCCAAATTGAAAAGGGATGGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495084.1
CDS CCA 72 bp GCAATGAGGTTAGGAGACTGTGCTGTCTGCATTTACTaGGTAGAGGCCAGTGAGGATTCCAAACATAGCACA +
Preference number: 6 (lower is better)
Translates to: AMRLGDCAVCIY*VEASEDSKHST
Trigger: TGTGCTATGTTTGGAATCCTCACTGGCCTCTACCCAGTAAATGCAGACAGCACAGTCTCCTAACCTCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493868.5
CDS CAA 72 bp GGTGCATCCGACGGCAGGGTGTTGGAAATATATGGTTaGGAAATGGTATTGGACCTTGTAAAAGTTGGGCGG +
Preference number: 6 (lower is better)
Translates to: GASDGRVLEIYG*EMVLDLVKVGR
Trigger: CCGCCCAACTTTTACAAGGTCCAATACCATTTCCAAACCATATATTTCCAACACCCTGCCGTCGGATGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp TCCAAATTTGGTGCAAAAGGAGCTGTGCCAGTGTCTCTTGTCATTTaGGGAGCAGGTTTCAGAGGACTAACCATGGCATCATCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: SKFGAKGAVPVSLVI*GAGFRGLTMASSGE
Trigger: CTCACCTGATGATGCCATGGTTAGTCCTCTGAAACCTGCTCCCAAAATGACAAGAGACACTGGCACAGCTCCTTTTGCACCAAATTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp GCAGTGGATTCTACAGAATCAGCAGCTGAAGAGACATCAGTATATTaGGTCTCAGCTGGAGGAAGTGGTGCCTTGGCTTTTGGTTTTCTC +
Preference number: 6 (lower is better)
Translates to: AVDSTESAAEETSVY*VSAGGSGALAFGFL
Trigger: GAGAAAACCAAAAGCCAAGGCACCACTTCCTCCAGCTGAGACCAAATATACTGATGTCTCTTCAGCTGCTGATTCTGTAGAATCCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000414843.5
ENST00000434366.5
ENST00000439313.5
ENST00000444537.5
ENST00000445474.2
ENST00000448708.5
ENST00000452626.5
ENST00000456171.5
ENST00000480873.1
ENST00000483743.6
ENST00000493921.1
ENST00000496396.1
ENST00000629362.2
ENST00000652658.2
CDS CCA 72 bp ATGCTCTGTTCTCAGGTTAGGCTTCGGTTTAAGGTTTaGCAGTGGCTCTTCTGGGCTTTCAGAAATAGCAGA +
Preference number: 6 (lower is better)
Translates to: MLCSQVRLRFKV*QWLFWAFRNSR
Trigger: TCTGCTATTTCTGAAAGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAGCCTAACCTGAGAACAGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp CTCTTCTTGGGTGCATCCGACGGCAGGGTGTTGGAAATATATGGTTaGGAAATGGTATTGGACCTTGTAAAAGTTGGGCGGTGCTTATTT +
Preference number: 6 (lower is better)
Translates to: LFLGASDGRVLEIYG*EMVLDLVKVGRCLF
Trigger: AAATAAGCACCGCCCAACTTTTACAAGGTCCAATACCATTTCCAAACCATATATTTCCAACACCCTGCCGTCGGATGCACCCAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000456171.5
ENST00000474975.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 72 bp TGTTCTCAGGTTAGGCTTCGGTTTAAGGTTTGGCAGTaGCTCTTCTGGGCTTTCAGAAATAGCAGAATCTTC +
Preference number: 6 (lower is better)
Translates to: CSQVRLRFKVWQ*LFWAFRNSRIF
Trigger: GAAGATTCTGCTATTTCTGAAAGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAGCCTAACCTGAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp CAACGGATCAAACTCACATTTGCTACATATAATAGGGGCAAGCTCTaGAAGCGATGCATGTGGACTCACTCTCACTATGGTCTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: QRIKLTFATYNRGKL*KRCMWTHSHYGLLC
Trigger: ACACAGAAGACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATTATATGTAGCAAATGTGAGTTTGATCCGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000452626.5
ENST00000456171.5
ENST00000456693.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp TTTGCTACATATAATAGGGGCAAGCTCTTGAAGCGATaGATGTGGACTCACTCTCACTATGGTCTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: FATYNRGKLLKR*MWTHSHYGLLC
Trigger: ACACAGAAGACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATTATATGTAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000452626.5
ENST00000456171.5
ENST00000456693.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp CTCCTCTATTCAAATGCCCTGAAGAATCATGCTTCCTaGACCATCACTGTGCTTATCTTCAAAACCCTAGTG +
Preference number: 6 (lower is better)
Translates to: LLYSNALKNHAS*TITVLIFKTLV
Trigger: CACTAGGGTTTTGAAGATAAGCACAGTGATGGTGCAGGAAGCATGATTCTTCAGGGCATTTGAATAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS GCA 72 bp ACCGAATTAAGTCATTCCTCTGCTCCTCTATTCAAATaGCCTGAAGAATCATGCTTCCTGCACCATCACTGT +
Preference number: 6 (lower is better)
Translates to: TELSHSSAPLFK*PEESCFLHHHC
Trigger: ACAGTGATGGTGCAGGAAGCATGATTCTTCAGGGCATTTGAATAGAGGAGCAGAGGAATGACTTAATTCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS GCA 72 bp CCTTCAAGGAGAATGGGTACGTTTCAGGTTTACAGATaGATTATCCATCCCTTTTCAATTTGGCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: PSRRMGTFQVYR*IIHPFSIWQQP
Trigger: AGGCTGCTGCCAAATTGAAAAGGGATGGATAATGCATCTGTAAACCTGAAACGTACCCATTCTCCTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495084.1
CDS TCA 72 bp GGTCCTGATATTTCATTTACTCCAGCGTACCTGCCATaGACAGTAGTAGATTTGATAATATCCCCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: GPDISFTPAYLP*TVVDLIISPGR
Trigger: CCTACCTGGGGATATTATCAAATCTACTACTGTTCATGGCAGGTACGCTGGAGTAAATGAAATATCAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000480873.1
ENST00000483743.6
ENST00000496396.1
CDS CCA 72 bp ACATATAATAGGGGCAAGCTCTTGAAGCGATGCATGTaGACTCACTCTCACTATGGTCTTCTGTGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: TYNRGKLLKRCM*THSHYGLLCFL
Trigger: AAGAAAACACAGAAGACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATTATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000452626.5
ENST00000456171.5
ENST00000456693.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 72 bp AAACTCACATTTGCTACATATAATAGGGGCAAGCTCTaGAAGCGATGCATGTGGACTCACTCTCACTATGGT +
Preference number: 6 (lower is better)
Translates to: KLTFATYNRGKL*KRCMWTHSHYG
Trigger: ACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATTATATGTAGCAAATGTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000452626.5
ENST00000456171.5
ENST00000456693.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 72 bp TGGGTAGAGGCCAGTGAGGATTCCAAACATAGCACATaGCAAAAGACAGTCCCTAATGACAGAATTATCTTG +
Preference number: 6 (lower is better)
Translates to: WVEASEDSKHST*QKTVPNDRIIL
Trigger: CAAGATAATTCTGTCATTAGGGACTGTCTTTTGCAATGTGCTATGTTTGGAATCCTCACTGGCCTCTACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493868.5
CDS GCA 72 bp CCTATCTACAGGAGGCAAAAGATCATCATTACCATGTaGACAAATTGGATCTTTTACGGTAAGCGGATCTTC +
Preference number: 6 (lower is better)
Translates to: PIYRRQKIIITM*TNWIFYGKRIF
Trigger: GAAGATCCGCTTACCGTAAAAGATCCAATTTGTGCACATGGTAATGATGATCTTTTGCCTCCTGTAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 72 bp CAACATTTCATGATCATTTCCAGTGATTGGCAGTCCTaGAAACCCAGAATCCATCCTCATATACAACTGACA +
Preference number: 6 (lower is better)
Translates to: QHFMIISSDWQS*KPRIHPHIQLT
Trigger: TGTCAGTTGTATATGAGGATGGATTCTGGGTTTCCAGGACTGCCAATCACTGGAAATGATCATGAAATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CAA 90 bp TGCATTTACTGGGTAGAGGCCAGTGAGGATTCCAAACATAGCACATaGCAAAAGACAGTCCCTAATGACAGAATTATCTTGTCTCAAATG +
Preference number: 6 (lower is better)
Translates to: CIYWVEASEDSKHST*QKTVPNDRIILSQM
Trigger: CATTTGAGACAAGATAATTCTGTCATTAGGGACTGTCTTTTGCAATGTGCTATGTTTGGAATCCTCACTGGCCTCTACCCAGTAAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493868.5
CDS CAA 90 bp CCCAACGACTTCAAGTTTCTTATACTGTCAACTACCTTCTTTCCATaGCTTGTATCATATACTACACTGTGTGGTTCTTGTCCATCTGTG +
Preference number: 6 (lower is better)
Translates to: PNDFKFLILSTTFFP*LVSYTTLCGSCPSV
Trigger: CACAGATGGACAAGAACCACACAGTGTAGTATATGATACAAGCAATGGAAAGAAGGTAGTTGACAGTATAAGAAACTTGAAGTCGTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS TCA 72 bp GTAAGCGGATCTTCTGAATGTATAATTAGGGTGCCTTaGCTCCTGAATTCCCTTGAGGTATTTACAGAATCT +
Preference number: 6 (lower is better)
Translates to: VSGSSECIIRVP*LLNSLEVFTES
Trigger: AGATTCTGTAAATACCTCAAGGGAATTCAGGAGTCAAGGCACCCTAATTATACATTCAGAAGATCCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp CCCATGTTCTTAGGAACCATAGAAGAGGCACATTTCTaGCTCTGCTCTCAATTTACTTGGTTCATAAGTATT +
Preference number: 6 (lower is better)
Translates to: PMFLGTIEEAHF*LCSQFTWFISI
Trigger: AATACTTATGAACCAAGTAAATTGAGAGCAGAGGCAGAAATGTGCCTCTTCTATGGTTCCTAAGAACATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CCA 72 bp AGCAAACTCTGTCGCATCTGTTCTGGGTCAGAGCTTTaGAATGTTAAAGAACTTTGTCTCATAACAGTGAAT +
Preference number: 6 (lower is better)
Translates to: SKLCRICSGSEL*NVKELCLITVN
Trigger: ATTCACTGTTATGAGACAAAGTTCTTTAACATTCCAAAGCTCTGACCCAGAACAGATGCGACAGAGTTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000495084.1
ENST00000629362.2
ENST00000652658.2
CDS TCA 72 bp ATGCATGTCCTGATCATCTTTATACTCTATGGTTTCTaGTTGCCAGTCTTTCGATATTTCCAAGGATTTGGG +
Preference number: 6 (lower is better)
Translates to: MHVLIIFILYGF*LPVFRYFQGFG
Trigger: CCCAAATCCTTGGAAATATCGAAAGACTGGCAATCAGAAACCATAGAGTATAAAGATGATCAGGACATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp ATGGGAAACACATTAATTGAACTTCTGTCCTCACAATaGAAGTCTCAAAGAGCATCTGCCATGATGAATGAA +
Preference number: 6 (lower is better)
Translates to: MGNTLIELLSSQ*KSQRASAMMNE
Trigger: TTCATTCATCATGGCAGATGCTCTTTGAGACTTGCATTGTGAGGACAGAAGTTCAATTAATGTGTTTCCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495084.1
CDS CCA 72 bp CACCAATACACAGAACTTATCAGACACACCAAGCTGTaGGATGTCCACAAATTTATTTACAGAATGAGTCTT +
Preference number: 6 (lower is better)
Translates to: HQYTELIRHTKL*DVHKFIYRMSL
Trigger: AAGACTCATTCTGTAAATAAATTTGTGGACATCCCACAGCTTGGTGTGTCTGATAAGTTCTGTGTATTGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493713.1
CDS CCA 72 bp ATTTCTTCTCAACATTTCATGATCATTTCCAGTGATTaGCAGTCCTGGAAACCCAGAATCCATCCTCATATA +
Preference number: 6 (lower is better)
Translates to: ISSQHFMIISSD*QSWKPRIHPHI
Trigger: TATATGAGGATGGATTCTGGGTTTCCAGGACTGCCAATCACTGGAAATGATCATGAAATGTTGAGAAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CCA 72 bp GCAATAGTTTGCACAGCACAAGTTAAATGTGAGCCTTaGGGGTCAAACTGTGAAATTATGTCAAGTTATTTC +
Preference number: 6 (lower is better)
Translates to: AIVCTAQVKCEP*GSNCEIMSSYF
Trigger: GAAATAACTTGACATAATTTCACAGTTTGACCCCCAAGGCTCACATTTAACTTGTGCTGTGCAAACTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CAA 72 bp GGTTCTGTTCAGCTGACAACAGATCGATTGTGTAACTaGATGGATTTAAGTGATACTGTGCACAAAGGAATA +
Preference number: 6 (lower is better)
Translates to: GSVQLTTDRLCN*MDLSDTVHKGI
Trigger: TATTCCTTTGTGCACAGTATCACTTAAATCCATCAAGTTACACAATCGATCTGTTGTCAGCTGAACAGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000414843.5
ENST00000439313.5
ENST00000444537.5
ENST00000448708.5
ENST00000452626.5
ENST00000456171.5
ENST00000456693.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 90 bp ACGACTTCAAGTTTCTTATACTGTCAACTACCTTCTTTCCATTGCTaGTATCATATACTACACTGTGTGGTTCTTGTCCATCTGTGCTTT +
Preference number: 6 (lower is better)
Translates to: TTSSFLYCQLPSFHC*YHILHCVVLVHLCF
Trigger: AAAGCACAGATGGACAAGAACCACACAGTGTAGTATATGATACAAGCAATGGAAAGAAGGTAGTTGACAGTATAAGAAACTTGAAGTCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS TCA 72 bp GCCAATTTTGGGTATATACTCTCGTGTAATTTCATTTaGAGGTTTTGGCTTGGGATTGTAGTCCTGTCTATA +
Preference number: 6 (lower is better)
Translates to: ANFGYILSCNFI*RFWLGIVVLSI
Trigger: TATAGACAGGACTACAATCCCAAGCCAAAACCTTCAAATGAAATTACACGAGAGTATATACCCAAAATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CCA 72 bp TGCAGAGTTATTTTCCTTATCAGACACACCAAGCTGTaGGATGTCCACAAATTTATTTACAGAATGAGTCTT +
Preference number: 6 (lower is better)
Translates to: CRVIFLIRHTKL*DVHKFIYRMSL
Trigger: AAGACTCATTCTGTAAATAAATTTGTGGACATCCCACAGCTTGGTGTGTCTGATAAGGAAAATAACTCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp TCAAGTTTCTTATACTGTCAACTACCTTCTTTCCATTaGTTGTATCATATACTACACTGTGTGGTTCTTGTC +
Preference number: 6 (lower is better)
Translates to: SSFLYCQLPSFH*LYHILHCVVLV
Trigger: GACAAGAACCACACAGTGTAGTATATGATACAAGCAATGGAAAGAAGGTAGTTGACAGTATAAGAAACTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp TTCTTAGGAACCATAGAAGAGGCACATTTCTGCCTCTaGTCTCAATTTACTTGGTTCATAAGTATTTTTCAA +
Preference number: 6 (lower is better)
Translates to: FLGTIEEAHFCL*SQFTWFISIFQ
Trigger: TTGAAAAATACTTATGAACCAAGTAAATTGAGAGCAGAGGCAGAAATGTGCCTCTTCTATGGTTCCTAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CCA 72 bp GTCTATAAAGTGGGTAATTCTTTAGGTAAGAAGCAGTaGAATTTTTGTCAATCCTATCTACAGGAGGCAAAA +
Preference number: 6 (lower is better)
Translates to: VYKVGNSLGKKQ*NFCQSYLQEAK
Trigger: TTTTGCCTCCTGTAGATAGGATTGACAAAAATTCCACTGCTTCTTACCTAAAGAATTACCCACTTTATAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 72 bp AGTTTCTTATACTGTCAACTACCTTCTTTCCATTGCTaGTATCATATACTACACTGTGTGGTTCTTGTCCAT +
Preference number: 6 (lower is better)
Translates to: SFLYCQLPSFHC*YHILHCVVLVH
Trigger: ATGGACAAGAACCACACAGTGTAGTATATGATACAAGCAATGGAAAGAAGGTAGTTGACAGTATAAGAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS GCA 72 bp CTAGAGTTGACAAAAGTCGTAGCAAAACAAACCATATaGAAATCAAAGTACTACGTAAATGTACTTGTGACT +
Preference number: 6 (lower is better)
Translates to: LELTKVVAKQTI*KSKYYVNVLVT
Trigger: AGTCACAAGTACATTTACGTAGTACTTTGATTTGCATATGGTTTGTTTTGCTACGACTTTTGTCAACTCTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489955.1
CDS CAA 72 bp TTCAAGTTTCTTATACTGTCAACTACCTTCTTTCCATaGCTTGTATCATATACTACACTGTGTGGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: FKFLILSTTFFP*LVSYTTLCGSC
Trigger: ACAAGAACCACACAGTGTAGTATATGATACAAGCAATGGAAAGAAGGTAGTTGACAGTATAAGAAACTTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 72 bp AACTTAAGCATGAGTGTTGAGTTGATATGTTGTTATTaGAAGTTTGCACACATTCTTCAACTTTGGAGTCAG +
Preference number: 6 (lower is better)
Translates to: NLSMSVELICCY*KFAHILQLWSQ
Trigger: CTGACTCCAAAGTTGAAGAATGTGTGCAAACTTCAAATAACAACATATCAACTCAACACTCATGCTTAAGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342193.8
ENST00000375458.6
ENST00000409184.8
ENST00000489955.1
ENST00000493868.5
ENST00000629362.2
ENST00000652658.2
CDS CAA 72 bp ATTCTCTGTTGGTATCAAAGAATCTACAAGATAAACTaGGGACATCTAGCCATACTAGAAAGAATGCTATCA +
Preference number: 6 (lower is better)
Translates to: ILCWYQRIYKIN*GHLAILERMLS
Trigger: TGATAGCATTCTTTCTAGTATGGCTAGATGTCCCAAGTTTATCTTGTAGATTCTTTGATACCAACAGAGAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493868.5