RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COBL (Homo sapiens)

Ensembl gene IDs: ENSG00000106078

Ensembl transcript IDs: ENST00000265136.12, ENST00000395540.6, ENST00000395542.6, ENST00000431948.5, ENST00000441453.5, ENST00000445054.5, ENST00000449281.1, ENST00000452534.5, ENST00000462395.1, ENST00000632460.1, ENST00000648294.1

Found 1273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGGGAATGGCTGTCCATGTGGGGCACTGCCCATCCACTCCAGTaGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGC +
Preference number: 1 (lower is better)
Translates to: PGEWLSMWGTAHPLQ*WCDLSHPPPLQDSG
Trigger: GCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCACATGGACAGCCATTCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR TCA 90 bp ATGGCTGTCCATGTGGGGCACTGCCCATCCACTCCAGTGGTGGTGTaGCCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATGCCCTG +
Preference number: 1 (lower is better)
Translates to: MAVHVGHCPSTPVVV*PQPPATLAGLGHAL
Trigger: CAGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCACATGGACAGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR CCA 90 bp GGGGAATGGCTGTCCATGTGGGGCACTGCCCATCCACTCCAGTGGTaGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATG +
Preference number: 1 (lower is better)
Translates to: GEWLSMWGTAHPLQW*CDLSHPPPLQDSGM
Trigger: CATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCACATGGACAGCCATTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 90 bp GACTGCAGAGGGATCTCACACTCAAAGAGGAGCCAGCAGCACCTCTaGACAGACATGGTGGTCACAACCTCTGGCATCTTTATCACATGT +
Preference number: 1 (lower is better)
Translates to: DCRGISHSKRSQQHL*TDMVVTTSGIFITC
Trigger: ACATGTGATAAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCAGAGGTGCTGCTGGCTCCTCTTTGAGTGTGAGATCCCTCTGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CCA 90 bp GGATCTCACACTCAAAGAGGAGCCAGCAGCACCTCTGCACAGACATaGTGGTCACAACCTCTGGCATCTTTATCACATGTACAACCCTTG +
Preference number: 1 (lower is better)
Translates to: GSHTQRGASSTSAQT*WSQPLASLSHVQPL
Trigger: CAAGGGTTGTACATGTGATAAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCAGAGGTGCTGCTGGCTCCTCTTTGAGTGTGAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CCA 90 bp TGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTaGGAGAAACCAGGGACAATATGGCAAGCTTTCAGACAGACAGAA +
Preference number: 1 (lower is better)
Translates to: CGDGFIFRLIFLSIS*EKPGTIWQAFRQTE
Trigger: TTCTGTCTGTCTGAAAGCTTGCCATATTGTCCCTGGTTTCTCCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR CCA 90 bp CTAGTACTTATCAAATGGAACCATCTTTACTTCTTTTCATGTGCCTaGGGAGCCACAGGTAGTAAAATCCAAGGCCAGAGGTCACGTGCT +
Preference number: 1 (lower is better)
Translates to: LVLIKWNHLYFFSCA*GATGSKIQGQRSRA
Trigger: AGCACGTGACCTCTGGCCTTGGATTTTACTACCTGTGGCTCCCCAGGCACATGAAAAGAAGTAAAGATGGTTCCATTTGATAAGTACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CCA 90 bp TCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCATTTaGCCTGTAGACAAGAAAGTAACACCAAAACTTGATGTTCCTGGC +
Preference number: 1 (lower is better)
Translates to: SSRYTGTHRKSTVRI*PVDKKVTPKLDVPG
Trigger: GCCAGGAACATCAAGTTTTGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR TCA 90 bp AGATCATGGACTGTGACCCTCTGTGAAGTGTTAGCCCCAAATATTTaGGGAAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCT +
Preference number: 1 (lower is better)
Translates to: RSWTVTLCEVLAPNI*GRRIQQFYYLTKPP
Trigger: AGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAACACTTCACAGAGGGTCACAGTCCATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 90 bp ACAGAATTGGTATTCCCAAGGGATTCTTCATGCTCTCAACTTGCCTaGACGTCTCTAGTTAGAAAACGTGAGCTACCATCTTTTGTGGAT +
Preference number: 1 (lower is better)
Translates to: TELVFPRDSSCSQLA*TSLVRKRELPSFVD
Trigger: ATCCACAAAAGATGGTAGCTCACGTTTTCTAACTAGAGACGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGGGAATACCAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR GCA 90 bp ACCTTAGCATTTGCTACAGAATTGGTATTCCCAAGGGATTCTTCATaGTCTCAACTTGCCTGCACGTCTCTAGTTAGAAAACGTGAGCTA +
Preference number: 1 (lower is better)
Translates to: TLAFATELVFPRDSS*SQLACTSLVRKREL
Trigger: TAGCTCACGTTTTCTAACTAGAGACGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGGGAATACCAATTCTGTAGCAAATGCTAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CCA 90 bp CAAATGGCCCTTCATTCTATCCAACATCTATCAGGCCATCTCTCATaGAGATCACTAGAGTATTGTCAAAGATCGACCACTCATGTCTTT +
Preference number: 1 (lower is better)
Translates to: QMALHSIQHLSGHLS*RSLEYCQRSTTHVF
Trigger: AAAGACATGAGTGGTCGATCTTTGACAATACTCTAGTGATCTCCATGAGAGATGGCCTGATAGATGTTGGATAGAATGAAGGGCCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 90 bp GTTATATGCTACAATATGGATAAACTTCGAGGAAATTGTGCTAAGTaGAATAAGCCAGGCGCAAAAAGACAAGCAGGCAAAGGGGAGTTG +
Preference number: 1 (lower is better)
Translates to: VICYNMDKLRGNCAK*NKPGAKRQAGKGEL
Trigger: CAACTCCCCTTTGCCTGCTTGTCTTTTTGCGCCTGGCTTATTTCACTTAGCACAATTTCCTCGAAGTTTATCCATATTGTAGCATATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR CCA 90 bp AGGCTCATTTTCCTCTCTATTAGCTGGGAGAAACCAGGGACAATATaGCAAGCTTTCAGACAGACAGAATTCATTACATTAGAACTGTGT +
Preference number: 1 (lower is better)
Translates to: RLIFLSISWEKPGTI*QAFRQTEFITLELC
Trigger: ACACAGTTCTAATGTAATGAATTCTGTCTGTCTGAAAGCTTGCCATATTGTCCCTGGTTTCTCCCAGCTAATAGAGAGGAAAATGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR CCA 90 bp CACAGTGCCAAGTCACATGTAAATCTACAAAACTTGTTCATCAAATaGCCCTTCATTCTATCCAACATCTATCAGGCCATCTCTCATGGA +
Preference number: 1 (lower is better)
Translates to: HSAKSHVNLQNLFIK*PFILSNIYQAISHG
Trigger: TCCATGAGAGATGGCCTGATAGATGTTGGATAGAATGAAGGGCCATTTGATGAACAAGTTTTGTAGATTTACATGTGACTTGGCACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 90 bp GATTTGCAGGACGATGAGGTCCTGGAGATCGGTTTCACAGCATTGTaGATATACTTAAATCTACTGAAGTATGCATTTGAAAATGGAAGG +
Preference number: 1 (lower is better)
Translates to: DLQDDEVLEIGFTAL*IYLNLLKYAFENGR
Trigger: CCTTCCATTTTCAAATGCATACTTCAGTAGATTTAAGTATATTCACAATGCTGTGAAACCGATCTCCAGGACCTCATCGTCCTGCAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR GCA 90 bp ATTAAGTGTGAGTGCTGGGCTCCAGCATTTATAGTCCCATTAACCTaGCAACAAGAATCGTTTATTAGCAACTTAAGATATTCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: IKCECWAPAFIVPLT*QQESFISNLRYSEA
Trigger: TGCCTCTGAATATCTTAAGTTGCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCAGCACTCACACTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 90 bp AGTATCACTTTCCCCTGTTCCAAGGATTTGCCTAGAGATTTTGTGTaGCCATCTTTCTTCAGCATAATAGCTACTTCTTACACAAATGCT +
Preference number: 1 (lower is better)
Translates to: SITFPCSKDLPRDFV*PSFFSIIATSYTNA
Trigger: AGCATTTGTGTAAGAAGTAGCTATTATGCTGAAGAAAGATGGGCACACAAAATCTCTAGGCAAATCCTTGGAACAGGGGAAAGTGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 90 bp TGGTGGTCACAACCTCTGGCATCTTTATCACATGTACAACCCTTGTaGCTAGTACTTATCAAATGGAACCATCTTTACTTCTTTTCATGT +
Preference number: 1 (lower is better)
Translates to: WWSQPLASLSHVQPL*LVLIKWNHLYFFSC
Trigger: ACATGAAAAGAAGTAAAGATGGTTCCATTTGATAAGTACTAGTCACAAGGGTTGTACATGTGATAAAGATGCCAGAGGTTGTGACCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 90 bp ATACTTATTGCATCATATTTGCTGCCTCTCGAACCAATAATTCTATaGGCAGTATCACTTTCCCCTGTTCCAAGGATTTGCCTAGAGATT +
Preference number: 1 (lower is better)
Translates to: ILIASYLLPLEPIIL*AVSLSPVPRICLEI
Trigger: AATCTCTAGGCAAATCCTTGGAACAGGGGAAAGTGATACTGCTCATAGAATTATTGGTTCGAGAGGCAGCAAATATGATGCAATAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 90 bp AGAGTATTGTCAAAGATCGACCACTCATGTCTTTGGCTAACTTTATaGTCAAGTAAATTGGGGGTGCCATGTTCAAATTATATTCACCCC +
Preference number: 1 (lower is better)
Translates to: RVLSKIDHSCLWLTL*SSKLGVPCSNYIHP
Trigger: GGGGTGAATATAATTTGAACATGGCACCCCCAATTTACTTGATCATAAAGTTAGCCAAAGACATGAGTGGTCGATCTTTGACAATACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 90 bp ATGGCAAGCTTTCAGACAGACAGAATTCATTACATTAGAACTGTGTaGATAACACTGATTTCAGGAGGAACATTTAGAAGTCGGTCCATA +
Preference number: 1 (lower is better)
Translates to: MASFQTDRIHYIRTV*ITLISGGTFRSRSI
Trigger: TATGGACCGACTTCTAAATGTTCCTCCTGAAATCAGTGTTATTCACACAGTTCTAATGTAATGAATTCTGTCTGTCTGAAAGCTTGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR CCA 90 bp CTGTTATTAATGCATTTATATGTAAACCCCAAAGGAAGTAAATTCTaGGTATACAATGAGCCCTTTTATCCTGAAAGGAGGAAGAACAAC +
Preference number: 1 (lower is better)
Translates to: LLLMHLYVNPKGSKF*VYNEPFYPERRKNN
Trigger: GTTGTTCTTCCTCCTTTCAGGATAAAAGGGCTCATTGTATACCCAGAATTTACTTCCTTTGGGGTTTACATATAAATGCATTAATAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
3UTR CAA 90 bp GCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTaGCAGGACTCGGGCATGCCCTGGCCACATGATCACGTAGGACTG +
Preference number: 2 (lower is better)
Translates to: AHPLQWWCDLSHPPP*QDSGMPWPHDHVGL
Trigger: CAGTCCTACGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTGCAGGACTCGGGCATaGCCTGGCCACATGATCACG +
Preference number: 2 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPCRTRA*PGHMIT
Trigger: CGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCCTTGGCACACGAGCTaGGCAGCGACACAGCATCTT +
Preference number: 2 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPPWHTS*AATQHL
Trigger: AAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAAAACACATTTCCTTaGCACACGAGCTGCGCAGCG +
Preference number: 2 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLQNTFP*HTSCAA
Trigger: CGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTTTG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGCCCATCCACTCCAGTaGTGGTGTGACCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAAHPLQ*WCDLSH
Trigger: GTGGCTGAGGTCACACCACCACTGGAGTGGATGGGC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACATGCCCTGGCCACATaGTCACGTAGGACTGTTTTC +
Preference number: 2 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGHALAT*SRRTVF
Trigger: GAAAACAGTCCTACGTGATCATGTGGCCAGGGCATG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCCTTGGCACACGAGCTaGGCAGCGACACAGCATCTT +
Preference number: 2 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAPWHTS*AATQHL
Trigger: AAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGG...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACTGCAGGACTCGGGCATaGCCTGGCCACATGATCACG +
Preference number: 2 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHCRTRA*PGHMIT
Trigger: CGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCA...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGTCCATGTGGGGCACTaGCCATCCACTCCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHVHVGH*PSTPVV
Trigger: CACCACTGGAGTGGATGGGCAGTGCCCCACATGGAC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGCTATGCAGACTCCTTaGGTGACGCCTGTGGGCATA +
Preference number: 2 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAAMQTP*VTPVGI
Trigger: TATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATTACAGGTGGGTTTCTaGAATTCTCTGGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: HSSGGVTSATRHPCRTRALQVGF*NSLASV
Trigger: AACAGAGGCCAGAGAATTGCAGAAACCCACCTGTAA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTGTCACTTCATAGCCTaGGGAATGGCTGTCCATGTG +
Preference number: 2 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPCHFIA*GMAVHV
Trigger: CACATGGACAGCCATTCCCCAGGCTATGAAGTGACA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTGCAGACTCCTTGAGTaGCGCCTGTGGGCATATTAC +
Preference number: 2 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMACRLLE*RLWAYY
Trigger: GTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTGCAGACTCCTTGAGTaGCGCCTGTGGGCATATTAC +
Preference number: 2 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSCRLLE*RLWAYY
Trigger: GTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCATGCCCTGGCCACATaGTCACGTAGGACTGTTTTC +
Preference number: 2 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAHALAT*SRRTVF
Trigger: GAAAACAGTCCTACGTGATCATGTGGCCAGGGCATG...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAATTAAGTGTGAGTGCTaGGCTCCAGCATTTATAGTC +
Preference number: 2 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAIKCEC*APAFIV
Trigger: GACTATAAATGCTGGAGCCCAGCACTCACACTTAAT...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACACTCCAGTGGTGGTGTaGCCTCAGCCACCCGCCACC +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDTPVVV*PQPPAT
Trigger: GGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCATAATTAAGTGTGAGTaGTGGGCTCCAGCATTTATA +
Preference number: 2 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPIIKCE*WAPAFI
Trigger: TATAAATGCTGGAGCCCAGCACTCACACTTAATTAT...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp AGCCAGGCGCAAAAAGACAAGCAGGCAAAGGGGAGTTGCTGTTCAGTGAGTAGACAGTCTCCAGGGCCCTaGTGCCTGGAAAGGATGCAG +
Preference number: 2 (lower is better)
Translates to: SQAQKDKQAKGSCCSVSRQSPGP*CLERMQ
Trigger: CTGCATCCTTTCCAGGCAGCAGGGCCCTGGAGACTG...TCTACTCACTGAACAGCAACTCCCCTTTGCCTGCTTGTCTTTTTGCGCCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGATGGGCATATTACAGGTaGGTTTCTGCAATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGWAYYR*VSAILW
Trigger: CCAGAGAATTGCAGAAACCCACCTGTAATATGCCCA...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCAAAACACATTTCCTTaGCACACGAGCTGCGCAGCG +
Preference number: 2 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHQNTFP*HTSCAA
Trigger: CGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTTTG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTAGTAACACCAAAACTTaGTGTTCCTGGCTATGCAGA +
Preference number: 2 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPSNTKT*CSWLCR
Trigger: TCTGCATAGCCAGGAACATCAAGTTTTGGTGTTACT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp AGCCAGGCGCAAAAAGACAAGCAGGCAAAGGGGAGTTGCTGTTCAGTGAGTAGAGCTGCCTGGAAAGGATaGAGTGCGGTCTGTGGTGAC +
Preference number: 2 (lower is better)
Translates to: SQAQKDKQAKGSCCSVSRAAWKG*SAVCGD
Trigger: GTCACCACAGACCGCACTGCATCCTTTCCAGGCAGC...TCTACTCACTGAACAGCAACTCCCCTTTGCCTGCTTGTCTTTTTGCGCCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR-3UTR CCA 90 bp CACAGTCTCCAGGGCCCTGCTGCCTGGAAAGGATGCAGTGCGGTCTGTGGTGACTTCCTCTCTATTAGCTaGGAGAAACCAGGGACAATA +
Preference number: 2 (lower is better)
Translates to: HSLQGPAAWKGCSAVCGDFLSIS*EKPGTI
Trigger: TATTGTCCCTGGTTTCTCCCAGCTAATAGAGAGGAA...GTCACCACAGACCGCACTGCATCCTTTCCAGGCAGCAGGGCCCTGGAGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTGGGCATATTACAGGTaGGTTTCTGCAATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAWAYYR*VSAILW
Trigger: CCAGAGAATTGCAGAAACCCACCTGTAATATGCCCA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAAATCAGTCTAAGGCATaGTTCTTTTTACTTTGCCCA +
Preference number: 2 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGNQSKA*FFLLCP
Trigger: TGGGCAAAGTAAAAAGAATCATGCCTTAGACTGATT...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTTAGCCCCAAATATTTaGGGAAGAAGAATCCAGCAG +
Preference number: 2 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIALAPNI*GRRIQQ
Trigger: CTGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCCAGAAGGCTCCCAGTaGAGTCATCAGGCTCCGTAC +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDPEGSQ*SHQAPY
Trigger: GTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACTTACAGGTGGGTTTCTaGAATTCTCTGGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHLQVGF*NSLASV
Trigger: AACAGAGGCCAGAGAATTGCAGAAACCCACCTGTAA...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATAATTAAGTGTGAGTaGTGGGCTCCAGCATTTATA +
Preference number: 2 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGIIKCE*WAPAFI
Trigger: TATAAATGCTGGAGCCCAGCACTCACACTTAATTAT...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTATTAAGTGTGAGTGCTaGGCTCCAGCATTTATAGTC +
Preference number: 2 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAIKCEC*APAFIV
Trigger: GACTATAAATGCTGGAGCCCAGCACTCACACTTAAT...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCGTACACAGGCACCGTaGGGGAGGCCTATGTCACTT +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDRTQAP*GRPMSL
Trigger: AAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACTTAGCCCCAAATATTTaGGGAAGAAGAATCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHLAPNI*GRRIQQ
Trigger: CTGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAA...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACAACATCCCTGCTCCTTaGCCCTCTGCAGGATTCCAG +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDNIPAP*PSAGFQ
Trigger: CTGGAATCCTGCAGAGGGTCAAGGAGCAGGGATGTT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTAATCAGTCTAAGGCATaGTTCTTTTTACTTTGCCCA +
Preference number: 2 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMANQSKA*FFLLCP
Trigger: TGGGCAAAGTAAAAAGAATCATGCCTTAGACTGATT...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCATGCCCTGGCCACATaGTCACGTAGGACTGTTTTC +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDHALAT*SRRTVF
Trigger: GAAAACAGTCCTACGTGATCATGTGGCCAGGGCATG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTCGTAGGACTGTTTTCTaGGTGGTAATAGTTGATTTT +
Preference number: 2 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMARRTVF*VVIVDF
Trigger: AAAATCAACTATTACCACCCAGAAAACAGTCCTACG...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTGCAGACTCCTTGAGTaGCGCCTGTGGGCATATTAC +
Preference number: 2 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRCRLLE*RLWAYY
Trigger: GTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACAGCGCAACTTTGATCTaGACTCTTGACAGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDSATLI*TLDRWA
Trigger: TGCCCACCTGTCAAGAGTTCAGATCAAAGTTGCGCT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp TTTTATAAATCACAGCATGCTCAATTGTCCACTGGCAACATGGTCTCCAGGGTGCTGGGTGAGGTTGTGTaGCTGCAGAGGGATCTCACA +
Preference number: 2 (lower is better)
Translates to: FYKSQHAQLSTGNMVSRVLGEVV*LQRDLT
Trigger: TGTGAGATCCCTCTGCAGTCACACAACCTCACCCAG...CACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCATGCTGTGATTTATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCATAGTCCCATTAACCTaGCAACAAGAATCGTTTATT +
Preference number: 2 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSIVPLT*QQESFI
Trigger: AATAAACGATTCTTGTTGGCAGGTTAATGGGACTAT...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACATAATTAAGTGTGAGTaGTGGGCTCCAGCATTTATA +
Preference number: 2 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHIIKCE*WAPAFI
Trigger: TATAAATGCTGGAGCCCAGCACTCACACTTAATTAT...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTAGGACTGTTTTCTaGGTGGTAATAGTTGATTTT +
Preference number: 2 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHRRTVF*VVIVDF
Trigger: AAAATCAACTATTACCACCCAGAAAACAGTCCTACG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCTCTCAGCGCAACTTTaGTCTGAACTCTTGACAGGT +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDLSAQL*SELLTG
Trigger: ACCTGTCAAGAGTTCAGATCAAAGTTGCGCTGAGAG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp TTGGTATTCCCAAGGGATTCTTCATGCTCTCAACTTGCCTGCACGTCTCTAGTTGTGAGGTTGTGTGACTaGAGAGGGATCTCACACTCA +
Preference number: 2 (lower is better)
Translates to: LVFPRDSSCSQLACTSLVVRLCD*RGISHS
Trigger: TGAGTGTGAGATCCCTCTGCAGTCACACAACCTCAC...AACTAGAGACGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGGGAATACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR TCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTGCAGACTCCTTGAGTaGCGCCTGTGGGCATATTAC +
Preference number: 2 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPCRLLE*RLWAYY
Trigger: GTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp TCTCTAGTTAGAAAACGTGAGCTACCATCTTTTGTGGATAGGGTGTATGACATGAGCCAGCAGCACCTCTaGACAGACATGGTGGTCACA +
Preference number: 2 (lower is better)
Translates to: SLVRKRELPSFVDRVYDMSQQHL*TDMVVT
Trigger: TGTGACCACCATGTCTGTGCAGAGGTGCTGCTGGCT...CATGTCATACACCCTATCCACAAAAGATGGTAGCTCACGTTTTCTAACTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR GCA 90 bp TTTTATAAATCACAGCATGCTCAATTGTCCACTGGCAACATGGTCTCCAGGGTGCCAAGGGATTCTTCATaGTCTCAACTTGCCTGCACG +
Preference number: 2 (lower is better)
Translates to: FYKSQHAQLSTGNMVSRVPRDSS*SQLACT
Trigger: CGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGG...CACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCATGCTGTGATTTATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CCA 90 bp GCTTTAAAAGGGAAGGGAATTCTGTTATATGCTACAATATGGATAAACTTCGAGCAGGGCCCTGCTGCCTaGAAAGGATGCAGTGCGGTC +
Preference number: 2 (lower is better)
Translates to: ALKGKGILLYATIWINFEQGPAA*KGCSAV
Trigger: GACCGCACTGCATCCTTTCCAGGCAGCAGGGCCCTG...CTCGAAGTTTATCCATATTGTAGCATATAACAGAATTCCCTTCCCTTTTAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR-3UTR CCA 90 bp TTTTATAAATCACAGCATGCTCAATTGTCCACTGGCAACATGGTCTCCAGGGTGCTACTCTGCCTGTCTTaGGACAATGCAGTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: FYKSQHAQLSTGNMVSRVLLCLS*DNAVEV
Trigger: CACCTCAACTGCATTGTCCCAAGACAGGCAGAGTAG...CACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCATGCTGTGATTTATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CAA 90 bp AAGAAAGTAACACCAAAACTTGATGTTCCTGGCTATGCAGACTCCTaGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTC +
Preference number: 2 (lower is better)
Translates to: KKVTPKLDVPGYADS*SDACGHITGGFLQF
Trigger: GAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAGTTTTGGTGTTACTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACAGTAACACCAAAACTTaGTGTTCCTGGCTATGCAGA +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDSNTKT*CSWLCR
Trigger: TCTGCATAGCCAGGAACATCAAGTTTTGGTGTTACT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp TCTCTAGTTAGAAAACGTGAGCTACCATCTTTTGTGGATAGGGTGTATGACATGCTCTTCGTAACTGGGTaGGGTTGTGTGACTGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLVRKRELPSFVDRVYDMLFVTG*GCVTAE
Trigger: CTCTGCAGTCACACAACCTCACCCAGTTACGAAGAG...CATGTCATACACCCTATCCACAAAAGATGGTAGCTCACGTTTTCTAACTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR GCA 90 bp TTGGTATTCCCAAGGGATTCTTCATGCTCTCAACTTGCCTGCACGTCTCTAGTTCCTGTTCCAAGGATTTaGCTAGAGATTTTGTGTGCC +
Preference number: 2 (lower is better)
Translates to: LVFPRDSSCSQLACTSLVPVPRI*LEILCA
Trigger: GGCACACAAAATCTCTAGGCAAATCCTTGGAACAGG...AACTAGAGACGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGGGAATACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTGGGCATATTACAGGTaGGTTTCTGCAATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRWAYYR*VSAILW
Trigger: CCAGAGAATTGCAGAAACCCACCTGTAATATGCCCA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR CAA 90 bp TCGTTTATTAGCAACTTAAGATATTCAGAGGCAAAACACATTTCCTaGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: SFISNLRYSEAKHIS*AHELRSDTASSPFL
Trigger: AAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTTTGCCTCTGAATATCTTAAGTTGCTAATAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp TCACAGGAACATTTCCAAGTATCAGTGAATTTCAGACAGGTGAATATTATCAACGGGCAGAAGAGACACTaGGAAAGGTCCGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: SQEHFQVSVNFRQVNIINGQKRH*ERSEVR
Trigger: CCTGACCTCGGACCTTTCCCAGTGTCTCTTCTGCCC...GTTGATAATATTCACCTGTCTGAAATTCACTGATACTTGGAAATGTTCCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
3UTR-3UTR CCA 90 bp TTTAGGCACTTAGTTTTACCAGGTAGACAGAAAGTTTCAGTTCTATCCAAATTGGGGCAGAAGAGACACTaGGAAAGGTCCGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: FRHLVLPGRQKVSVLSKLGQKRH*ERSEVR
Trigger: CCTGACCTCGGACCTTTCCCAGTGTCTCTTCTGCCC...CAATTTGGATAGAACTGAAACTTTCTGTCTACCTGGTAAAACTAAGTGCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
3UTR-3UTR CCA 90 bp TTGGTATTCCCAAGGGATTCTTCATGCTCTCAACTTGCCTGCACGTCTCTAGTTTCAGGCCATCTCTCATaGAGATCACTAGAGTATTGT +
Preference number: 2 (lower is better)
Translates to: LVFPRDSSCSQLACTSLVSGHLS*RSLEYC
Trigger: ACAATACTCTAGTGATCTCCATGAGAGATGGCCTGA...AACTAGAGACGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGGGAATACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATTACAGGTGGGTTTCTaGAATTCTCTGGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSLQVGF*NSLASV
Trigger: AACAGAGGCCAGAGAATTGCAGAAACCCACCTGTAA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR TCA 90 bp TTTTATAAATCACAGCATGCTCAATTGTCCACTGGCAACATGGTCTCCAGGGTGGAACCAATAATTCTATaGGCAGTATCACTTTCCCCT +
Preference number: 2 (lower is better)
Translates to: FYKSQHAQLSTGNMVSRVEPIIL*AVSLSP
Trigger: AGGGGAAAGTGATACTGCTCATAGAATTATTGGTTC...CACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCATGCTGTGATTTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACATAGTCCCATTAACCTaGCAACAAGAATCGTTTATT +
Preference number: 2 (lower is better)
Translates to: HHVRRPRYHTKGANELLDIVPLT*QQESFI
Trigger: AATAAACGATTCTTGTTGGCAGGTTAATGGGACTAT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CCA 90 bp TCTCTAGTTAGAAAACGTGAGCTACCATCTTTTGTGGATAGGGTGTATGACATGTTCTTTTCATGTGCCTaGGGAGCCACAGGTAGTAAA +
Preference number: 2 (lower is better)
Translates to: SLVRKRELPSFVDRVYDMFFSCA*GATGSK
Trigger: TTTACTACCTGTGGCTCCCCAGGCACATGAAAAGAA...CATGTCATACACCCTATCCACAAAAGATGGTAGCTCACGTTTTCTAACTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CCA 90 bp CTTCATTCTATCCAACATCTATCAGGCCATCTCTCATGGAGATCACTAGAGTATGGTGGTCACAACCTCTaGCATCTTTATCACATGTAC +
Preference number: 2 (lower is better)
Translates to: LHSIQHLSGHLSWRSLEYGGHNL*HLYHMY
Trigger: GTACATGTGATAAAGATGCCAGAGGTTGTGACCACC...ATACTCTAGTGATCTCCATGAGAGATGGCCTGATAGATGTTGGATAGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CCA 90 bp TTTTATAAATCACAGCATGCTCAATTGTCCACTGGCAACATGGTCTCCAGGGTGCATTTGCTACAGAATTaGTATTCCCAAGGGATTCTT +
Preference number: 2 (lower is better)
Translates to: FYKSQHAQLSTGNMVSRVHLLQN*YSQGIL
Trigger: AAGAATCCCTTGGGAATACCAATTCTGTAGCAAATG...CACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCATGCTGTGATTTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CAA 90 bp ACCAATAATTCTATGAGCAGTATCACTTTCCCCTGTTCCAAGGATTaGCCTAGAGATTTTGTGTGCCCATCTTTCTTCAGCATAATAGCT +
Preference number: 2 (lower is better)
Translates to: TNNSMSSITFPCSKD*PRDFVCPSFFSIIA
Trigger: AGCTATTATGCTGAAGAAAGATGGGCACACAAAATCTCTAGGCAAATCCTTGGAACAGGGGAAAGTGATACTGCTCATAGAATTATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR TCA 90 bp CTTCATTCTATCCAACATCTATCAGGCCATCTCTCATGGAGATCACTAGAGTATCATGTACAACCCTTGTaGCTAGTACTTATCAAATGG +
Preference number: 2 (lower is better)
Translates to: LHSIQHLSGHLSWRSLEYHVQPL*LVLIKW
Trigger: CCATTTGATAAGTACTAGTCACAAGGGTTGTACATG...ATACTCTAGTGATCTCCATGAGAGATGGCCTGATAGATGTTGGATAGAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCATAGTCCCATTAACCTaGCAACAAGAATCGTTTATT +
Preference number: 2 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPIVPLT*QQESFI
Trigger: AATAAACGATTCTTGTTGGCAGGTTAATGGGACTAT...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR GCA 90 bp TATACTTATTGCATCATATTTGCTGCCTCTCGAACCAATAATTCTATGAGCAGTAGGCCAGAGGTCACGTaGTTGTTATTCACTCTTATA +
Preference number: 2 (lower is better)
Translates to: YTYCIIFAASRTNNSMSSRPEVT*LLFTLI
Trigger: TATAAGAGTGAATAACAAGCACGTGACCTCTGGCCT...ACTGCTCATAGAATTATTGGTTCGAGAGGCAGCAAATATGATGCAATAAGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CCA 90 bp GAAGGGAATTCTGTTATATGCTACAATATGGATAAACTTCGAGGAAATTGTGCTTTTAAAAGTCTTGCCTaGGTTGAGCAAAACAAGCCT +
Preference number: 2 (lower is better)
Translates to: EGNSVICYNMDKLRGNCAFKSLA*VEQNKP
Trigger: AGGCTTGTTTTGCTCAACCCAGGCAAGACTTTTAAA...AGCACAATTTCCTCGAAGTTTATCCATATTGTAGCATATAACAGAATTCCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR-3UTR CAA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTAGCCACCCGCCACCCTaGCAGGACTCGGGCATGCCC +
Preference number: 3 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPSHPPP*QDSGMP
Trigger: GGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR TCA 72 bp CATGTGGGGCACTGCCCATCCACTCCAGTGGTGGTGTaGCCTCAGCCACCCGCCACCCTTGCAGGACTCGGG +
Preference number: 3 (lower is better)
Translates to: HVGHCPSTPVVV*PQPPATLAGLG
Trigger: CCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 72 bp TCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTaGAGGACTCGGGCATGCCCTGGCCACATGATCACG +
Preference number: 3 (lower is better)
Translates to: SSGGVTSATRHP*RTRACPGHMIT
Trigger: CGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR CCA 72 bp TGGCTGTCCATGTGGGGCACTGCCCATCCACTCCAGTaGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAG +
Preference number: 3 (lower is better)
Translates to: WLSMWGTAHPLQ*WCDLSHPPPLQ
Trigger: CTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCACATGGACAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CAA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGGCTATGCAGACTCCTaGAGTGACGCCTGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAGYADS*SDACGH
Trigger: ATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CAA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGGCTATGCAGACTCCTaGAGTGACGCCTGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGGYADS*SDACGH
Trigger: ATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 72 bp GAGCACAGTCTCCAGGGCCCTGCTGCCTGGAAAGGATaGAGTGCGGTCTGTGGTGACGGGTTCATATTCAGG +
Preference number: 3 (lower is better)
Translates to: EHSLQGPAAWKG*SAVCGDGFIFR
Trigger: CCTGAATATGAACCCGTCACCACAGACCGCACTGCATCCTTTCCAGGCAGCAGGGCCCTGGAGACTGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR-3UTR CAA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGGCTATGCAGACTCCTaGAGTGACGCCTGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAGYADS*SDACGH
Trigger: ATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR CCA 72 bp CCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTaGGGGAGGCCTATGTCACTTCATAGCCTGGGGAAT +
Preference number: 3 (lower is better)
Translates to: PSEVIRLRTQAP*GRPMSLHSLGN
Trigger: ATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CAA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGTTAGCCCCAAATATTaGAGGAAGAAGAATCCAGCA +
Preference number: 3 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAVSPKY*RKKNPA
Trigger: TGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAAC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CAA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCTAACAAAGCCACCTTaGAAAAGCCTCCCAATTTTT +
Preference number: 3 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLLTKPP*KSLPIF
Trigger: AAAAATTGGGAGGCTTTTCAAAGGTGGCTTTGTTAG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR TCA 72 bp GCCACCCTTGCAGGACTCGGGCATGCCCTGGCCACATaGTCACGTAGGACTGTTTTCTGGGTGGTAATAGTT +
Preference number: 3 (lower is better)
Translates to: ATLAGLGHALAT*SRRTVFWVVIV
Trigger: AACTATTACCACCCAGAAAACAGTCCTACGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCAAGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 72 bp GGGATCTCACACTCAAAGAGGAGCCAGCAGCACCTCTaGACAGACATGGTGGTCACAACCTCTGGCATCTTT +
Preference number: 3 (lower is better)
Translates to: GISHSKRSQQHL*TDMVVTTSGIF
Trigger: AAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCAGAGGTGCTGCTGGCTCCTCTTTGAGTGTGAGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CAA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACTAACAAAGCCACCTTaGAAAAGCCTCCCAATTTTT +
Preference number: 3 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGLTKPP*KSLPIF
Trigger: AAAAATTGGGAGGCTTTTCAAAGGTGGCTTTGTTAG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR TCA 72 bp CCCTGCTGCCTGGAAAGGATGCAGTGCGGTCTGTGGTaGCGGGTTCATATTCAGGCTCATTTTCCTCTCTAT +
Preference number: 3 (lower is better)
Translates to: PCCLERMQCGLW*RVHIQAHFPLY
Trigger: ATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACAGACCGCACTGCATCCTTTCCAGGCAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR-3UTR CAA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGTTAGCCCCAAATATTaGAGGAAGAAGAATCCAGCA +
Preference number: 3 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSVSPKY*RKKNPA
Trigger: TGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAAC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CAA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGGCTATGCAGACTCCTaGAGTGACGCCTGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRGYADS*SDACGH
Trigger: ATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CAA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGCAAAACACATTTCCTaGGCACACGAGCTGCGCAGC +
Preference number: 3 (lower is better)
Translates to: HHVRRPRYHTKGANELLDAKHIS*AHELRS
Trigger: GCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTTTGC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR TCA 72 bp ACCTACTCTGCCTGTCTTGGGACAATGCAGTTGAGGTaGCTAGCTCTTCGTAACTGGGTGAGGTTGTGTGAC +
Preference number: 3 (lower is better)
Translates to: TYSACLGTMQLR*LALRNWVRLCD
Trigger: GTCACACAACCTCACCCAGTTACGAAGAGCTAGTCACCTCAACTGCATTGTCCCAAGACAGGCAGAGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CAA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCATCAACTGTGCGCATTaGGCCTGTAGACAAGAAAGT +
Preference number: 3 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFINCAH*ACRQES
Trigger: ACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGAT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR TCA 72 bp CACCAAAACTTGATGTTCCTGGCTATGCAGACTCCTTaGGTGACGCCTGTGGGCATATTACAGGTGGGTTTC +
Preference number: 3 (lower is better)
Translates to: HQNLMFLAMQTP*VTPVGILQVGF
Trigger: GAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAGTTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CAA 90 bp TTGGTATTCCCAAGGGATTCTTCATGCTCTCAACTTGCCTGCACGTCTCTAGTTGCTGACTTAGCCCTATaGCATTTGTTTTCCCCCACC +
Preference number: 3 (lower is better)
Translates to: LVFPRDSSCSQLACTSLVADLAL*HLFSPT
Trigger: GGTGGGGGAAAACAAATGCAATAGGGCTAAGTCAGC...AACTAGAGACGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGGGAATACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 72 bp AACCAAAATTGTGATGCTCTCAGCGCAACTTTGATCTaGACTCTTGACAGGTGGGCATCCAACATCCCTGCT +
Preference number: 3 (lower is better)
Translates to: NQNCDALSATLI*TLDRWASNIPA
Trigger: AGCAGGGATGTTGGATGCCCACCTGTCAAGAGTTCAGATCAAAGTTGCGCTGAGAGCATCACAATTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR-3UTR CAA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGTTAGCCCCAAATATTaGAGGAAGAAGAATCCAGCA +
Preference number: 3 (lower is better)
Translates to: HHVRRPRYHTKGANELLDVSPKY*RKKNPA
Trigger: TGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAAC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 72 bp GATAGCTGTGATGAAGAGCAATTGGCTGGTAGCTCGTaGCTCACCAAGAGTTTAGCAACGTTAATCAGTGAA +
Preference number: 3 (lower is better)
Translates to: DSCDEEQLAGSS*LTKSLATLISE
Trigger: TTCACTGATTAACGTTGCTAAACTCTTGGTGAGGCACGAGCTACCAGCCAATTGCTCTTCATCACAGCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 72 bp GTATTCCCAAGGGATTCTTCATGCTCTCAACTTGCCTaGACGTCTCTAGTTAGAAAACGTGAGCTACCATCT +
Preference number: 3 (lower is better)
Translates to: VFPRDSSCSQLA*TSLVRKRELPS
Trigger: AGATGGTAGCTCACGTTTTCTAACTAGAGACGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGGGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CCA 72 bp GACCACGATATCATACAAAGGGAGCCAATGAGCTGTTaGACAAACGCGTCAAGGCTGAACCAAAATTGTGAT +
Preference number: 3 (lower is better)
Translates to: DHDIIQREPMSC*TNASRLNQNCD
Trigger: ATCACAATTTTGGTTCAGCCTTGACGCGTTTGTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR CCA 72 bp ATCAAATGGAACCATCTTTACTTCTTTTCATGTGCCTaGGGAGCCACAGGTAGTAAAATCCAAGGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: IKWNHLYFFSCA*GATGSKIQGQR
Trigger: CCTCTGGCCTTGGATTTTACTACCTGTGGCTCCCCAGGCACATGAAAAGAAGTAAAGATGGTTCCATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CCA 72 bp GGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTaGGAGAAACCAGGGACAATATGGCAAGCTTTCAGA +
Preference number: 3 (lower is better)
Translates to: GFIFRLIFLSIS*EKPGTIWQAFR
Trigger: TCTGAAAGCTTGCCATATTGTCCCTGGTTTCTCCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
3UTR-3UTR CAA 90 bp TCTCTAGTTAGAAAACGTGAGCTACCATCTTTTGTGGATAGGGTGTATGACATGCCAGAGGTCACGTGCTaGTTATTCACTCTTATAGCC +
Preference number: 3 (lower is better)
Translates to: SLVRKRELPSFVDRVYDMPEVTC*LFTLIA
Trigger: GGCTATAAGAGTGAATAACAAGCACGTGACCTCTGG...CATGTCATACACCCTATCCACAAAAGATGGTAGCTCACGTTTTCTAACTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CAA 90 bp TATACTTATTGCATCATATTTGCTGCCTCTCGAACCAATAATTCTATGAGCAGTCGTAACTGGGTGAGGTaGTGTGACTGCAGAGGGATC +
Preference number: 3 (lower is better)
Translates to: YTYCIIFAASRTNNSMSSRNWVR*CDCRGI
Trigger: GATCCCTCTGCAGTCACACAACCTCACCCAGTTACG...ACTGCTCATAGAATTATTGGTTCGAGAGGCAGCAAATATGATGCAATAAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR-3UTR CAA 90 bp TTTTATAAATCACAGCATGCTCAATTGTCCACTGGCAACATGGTCTCCAGGGTGGAGATCACTAGAGTATaGTCAAAGATCGACCACTCA +
Preference number: 3 (lower is better)
Translates to: FYKSQHAQLSTGNMVSRVEITRV*SKIDHS
Trigger: TGAGTGGTCGATCTTTGACAATACTCTAGTGATCTC...CACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCATGCTGTGATTTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 72 bp GCATCATATTTGCTGCCTCTCGAACCAATAATTCTATaGGCAGTATCACTTTCCCCTGTTCCAAGGATTTGC +
Preference number: 3 (lower is better)
Translates to: ASYLLPLEPIIL*AVSLSPVPRIC
Trigger: GCAAATCCTTGGAACAGGGGAAAGTGATACTGCTCATAGAATTATTGGTTCGAGAGGCAGCAAATATGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 72 bp ACTGTGACCCTCTGTGAAGTGTTAGCCCCAAATATTTaGGGAAGAAGAATCCAGCAGTTTTACTACCTAACA +
Preference number: 3 (lower is better)
Translates to: TVTLCEVLAPNI*GRRIQQFYYLT
Trigger: TGTTAGGTAGTAAAACTGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAACACTTCACAGAGGGTCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR GCA 72 bp TTCCCCTGTTCCAAGGATTTGCCTAGAGATTTTGTGTaGCCATCTTTCTTCAGCATAATAGCTACTTCTTAC +
Preference number: 3 (lower is better)
Translates to: FPCSKDLPRDFV*PSFFSIIATSY
Trigger: GTAAGAAGTAGCTATTATGCTGAAGAAAGATGGGCACACAAAATCTCTAGGCAAATCCTTGGAACAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CCA 72 bp CTTCATTCTATCCAACATCTATCAGGCCATCTCTCATaGAGATCACTAGAGTATTGTCAAAGATCGACCACT +
Preference number: 3 (lower is better)
Translates to: LHSIQHLSGHLS*RSLEYCQRSTT
Trigger: AGTGGTCGATCTTTGACAATACTCTAGTGATCTCCATGAGAGATGGCCTGATAGATGTTGGATAGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR GCA 72 bp GAGTGCTGGGCTCCAGCATTTATAGTCCCATTAACCTaGCAACAAGAATCGTTTATTAGCAACTTAAGATAT +
Preference number: 3 (lower is better)
Translates to: ECWAPAFIVPLT*QQESFISNLRY
Trigger: ATATCTTAAGTTGCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCAGCACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR TCA 72 bp CAACCTCTGGCATCTTTATCACATGTACAACCCTTGTaGCTAGTACTTATCAAATGGAACCATCTTTACTTC +
Preference number: 3 (lower is better)
Translates to: QPLASLSHVQPL*LVLIKWNHLYF
Trigger: GAAGTAAAGATGGTTCCATTTGATAAGTACTAGTCACAAGGGTTGTACATGTGATAAAGATGCCAGAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR TCA 72 bp TCAAAGATCGACCACTCATGTCTTTGGCTAACTTTATaGTCAAGTAAATTGGGGGTGCCATGTTCAAATTAT +
Preference number: 3 (lower is better)
Translates to: SKIDHSCLWLTL*SSKLGVPCSNY
Trigger: ATAATTTGAACATGGCACCCCCAATTTACTTGATCATAAAGTTAGCCAAAGACATGAGTGGTCGATCTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR CCA 72 bp AAGTCACATGTAAATCTACAAAACTTGTTCATCAAATaGCCCTTCATTCTATCCAACATCTATCAGGCCATC +
Preference number: 3 (lower is better)
Translates to: KSHVNLQNLFIK*PFILSNIYQAI
Trigger: GATGGCCTGATAGATGTTGGATAGAATGAAGGGCCATTTGATGAACAAGTTTTGTAGATTTACATGTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
3UTR GCA 72 bp GAGAAACATGACAAGCTTCTCCAGTTCAAATGCATCTaGATAATAAAAGTTAATCAAAGCAAGCAAGAACTA +
Preference number: 3 (lower is better)
Translates to: EKHDKLLQFKCI*IIKVNQSKQEL
Trigger: TAGTTCTTGCTTGCTTTGATTAACTTTTATTATGCAGATGCATTTGAACTGGAGAAGCTTGTCATGTTTCTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCCATCCGGGCTGCAGTaGCTGCCAGACCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPPSGLQ*LPDPRG
Trigger: GCCCCTGGGGTCTGGCAGCCACTGCAGCCCGGATGG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCGCTGGCACCCTCACGTaGCCCATGCCCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPAGTLT*PMPMVG
Trigger: CCCCACCATGGGCATGGGTCACGTGAGGGTGCCAGC...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCGAGCCTTCCTCAGGCTaGAGGTGCCGCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPEPSSG*RCRCAR
Trigger: GCGGGCACAGCGGCACCTGCAGCCTGAGGAAGGCTC...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATGGGAAGGCTCGCCGTaGCCTGGGGCGCGCACAGAG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAWEGSP*PGARTE
Trigger: CTCTGTGCGCGCCCCAGGCCACGGCGAGCCTTCCCA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGCTGGCACCCTCACGTaGCCCATGCCCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAAGTLT*PMPMVG
Trigger: CCCCACCATGGGCATGGGTCACGTGAGGGTGCCAGC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCGGGCTGCAGTGGCTaGCAGACCCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPGCSG*QTPGAG
Trigger: GCCTGCCCCTGGGGTCTGGCAGCCACTGCAGCCCGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGGCCACCCGCCACCCTTaGAGGACTCGGGCATGCCCT +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLATRHP*RTRACP
Trigger: AGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGC...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAAGGCTCGCCGTGGCCTaGGGCGCGCACAGAGCCATT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRARLAVA*GAHRAI
Trigger: AATGGCTCTGTGCGCGCCCCAGGCCACGGCGAGCCT...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGACCCTCCTGGAGGGTaGGAAGGCTCGCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRADPPGG*EGSPWP
Trigger: AGGCCACGGCGAGCCTTCCCACCCTCCAGGAGGGTC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAACTCCAGTGGTGGTGTaGCCTCAGCCACCCGCCACC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRATPVVV*PQPPAT
Trigger: GGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGT...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGACTCCAGTGGTGGTGTaGCCTCAGCCACCCGCCACC +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLTPVVV*PQPPAT
Trigger: GGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGT...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGGGAGGCCGTCCTTGGTaGAGAGAGAGCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLGGRPW*RESLGG
Trigger: CCCTCCCAGGCTCTCTCTGCACCAAGGACGGCCTCC...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCGGCTTGCCTTGCGTCTaGGGTGTTGCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPGLPCV*GVAEGA
Trigger: GGCACCCTCAGCAACACCGCAGACGCAAGGCAAGCC...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATGTGCCAGACCCTCCTaGAGGGTGGGAAGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRACARPS*RVGRLA
Trigger: GGCGAGCCTTCCCACCCTCCAGGAGGGTCTGGCACA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCGTAGGACAGTTTCGCTaGCCTGCCCTCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPVGQFR*PALPGV
Trigger: CACACCGGGGAGGGCAGGCCAGCGAAACTGTCCTAC...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATTTGGGTATCGGGTCTaGGGCCTCGGAACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAFGYRV*GLGTSA
Trigger: GGCGCTGGTTCCGAGGCCTCAGACCCGATACCCAAA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCCAGCACTGGCGCCTTaGCTGCATAACCCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPPALAP*LHNPSR
Trigger: CCGAGAAGGGTTATGCAGGCAAGGCGCCAGTGCTGG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCGTGCCCGCGGATAGCTaGCAGCAGTGCAGATCGTTC +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPVPADS*QQCRSF
Trigger: GAACGATCTGCACTGCTGGCAGCTATCCGCGGGCAC...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACTGCAGGTGCCGCTGTaGCCGCGGATAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGLQVPL*PRIAAS
Trigger: GCTGGCAGCTATCCGCGGGCACAGCGGCACCTGCAG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGTCTCGCAGCCCCTGTaGCGGAGCGGATGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGVSQPL*RSGWRP
Trigger: TGGACGCCATCCGCTCCGGCACAGGGGCTGCGAGAC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGCCACCCGCCACCCTTaGAGGACTCGGGCATGCCCT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPATRHP*RTRACP
Trigger: AGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGGGACTCGGTGGTGGTaGCTGTGGTGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPGTRWW*LWWRGS
Trigger: GCTCCCCCTCCACCACAGCCACCACCACCGAGTCCC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCGCCGTGAGGGATCATaGCATCCTGTGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPRREGS*HPVGSG
Trigger: ACCACTGCCCACAGGATGCCATGATCCCTCACGGCG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTTCCGGCCCTCATGGTaGGCAGACTTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLFRPSW*ADFCWG
Trigger: GCCCCAGCAGAAGTCTGCCCACCATGAGGGCCGGAA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR CAA 72 bp CTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTaGCAGGACTCGGGCATGCCCTGGCCACATGATCAC +
Preference number: 4 (lower is better)
Translates to: LQWWCDLSHPPP*QDSGMPWPHDH
Trigger: GTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTCCCTGCTGCAGGCCTaGGTGTCAGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPSLLQA*VSDVCG
Trigger: TCCACACACATCTGACACTCAGGCCTGCAGCAGGGA...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGGACTTTCCGAGCCCTaGGCAGAGAGTGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAGLSEP*AESAAS
Trigger: AGATGCCGCACTCTCTGCTCAGGGCTCGGAAAGTCC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTACTCCAGTGGTGGTGTaGCCTCAGCCACCCGCCACC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPTPVVV*PQPPAT
Trigger: GGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAATGCGAACCAAGTTCTaGTGCGACCCGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAMRTKF*CDPRAP
Trigger: TGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCGCAT...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGATGCGAACCAAGTTCTaGTGCGACCCGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLMRTKF*CDPRAP
Trigger: TGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCGCAT...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTCTGGATTCTGCGTCTaGGTGGGCACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLSGFCV*VGTGVE
Trigger: CTCCACCCCTGTGCCCACGCAGACGCAGAATCCAGA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCTGCTCTCTGGATTCTaGGTCTGCGTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLLLSGF*VCVGTG
Trigger: CCCTGTGCCCACGCAGACGCAGAATCCAGAGAGCAG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACCAGCACTGGCGCCTTaGCTGCATAACCCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAPALAP*LHNPSR
Trigger: CCGAGAAGGGTTATGCAGGCAAGGCGCCAGTGCTGG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCAGGAGGGGCTCCCACTaGCAAATCTTCCCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPRRGSH*QIFPVV
Trigger: AACCACGGGGAAGATTTGGCAGTGGGAGCCCCTCCT...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGTGCCCGCGGATAGCTaGCAGCAGTGCAGATCGTTC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAVPADS*QQCRSF
Trigger: GAACGATCTGCACTGCTGGCAGCTATCCGCGGGCAC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGCCCTGAGCAGAGAGTaGGGCATCTCGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAALSRE*GISEAL
Trigger: CAGAGCTTCCGAGATGCCGCACTCTCTGCTCAGGGC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGGTCCATGTGGGGCACTaGCCATCCACTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLVHVGH*PSTPVV
Trigger: CACCACTGGAGTGGATGGGCAGTGCCCCACATGGAC...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGGCTTTTGTGGCACCTaGCGTCCACCACCCATCGTG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAGFCGT*RPPPIV
Trigger: CACGATGGGTGGTGGACGGCAGGTGCCACAAAAGCC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTATCCTCAGTGCGGTTaGGGATCAGGGGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPYPQCG*GSGDSV
Trigger: CACCGAGTCCCCTGATCCCCAACCGCACTGAGGATA...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCACAAGGGGCTCTTCTaGGGACCCAGGTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLHKGLF*GPRSGV
Trigger: AACCCCAGACCTGGGTCCCCAGAAGAGCCCCTTGTG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACGCCGTGAGGGATCATaGCATCCTGTGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRARREGS*HPVGSG
Trigger: ACCACTGCCCACAGGATGCCATGATCCCTCACGGCG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGGGGAGTCTCTCCTGCTaGCAACACCCTCCGAGTCGA +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLGSLSC*QHPPSR
Trigger: TCGACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCC...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGATTCTGCGTCTGCGTaGGCACAGGGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGDSASA*AQGWRG
Trigger: CCCCCTCCACCCCTGTGCCCACGCAGACGCAGAATC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATGGTGCAGCCAGCACTaGCGCCTTGCCTGCATAACC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAWCSQH*RLACIT
Trigger: GGTTATGCAGGCAAGGCGCCAGTGCTGGCTGCACCA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCATCAGGTGCGCGTCTaGGCTCAGATGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLHQVRV*AQMLSW
Trigger: CCAGCTCAGCATCTGAGCCCAGACGCGCACCTGATG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACATCAGGTGCGCGTCTaGGCTCAGATGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAHQVRV*AQMLSW
Trigger: CCAGCTCAGCATCTGAGCCCAGACGCGCACCTGATG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGAAGGCTCGCCGTaGCCTGGGGCGCGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAWEGSP*PGARTE
Trigger: CTCTGTGCGCGCCCCAGGCCACGGCGAGCCTTCCCA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATCTGGGAGGCTTTTGTaGCACCTGCCGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRASGRLL*HLPSTT
Trigger: GGTGGTGGACGGCAGGTGCCACAAAAGCCTCCCAGA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACCTGGAGGCCGTCCTTaGTGCAGAGAGAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAPGGRP*CRESLP
Trigger: AGGAAGGCTCTCTCTGCACCAAGGACGGCCTCCAGG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGAAAACAGCTGCCAACTaGCACGGTCTCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLKTAAN*HGLLRL
Trigger: GAGGCGGAGGAGACCGTGTCAGTTGGCAGCTGTTTT...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCATGGATGGAGCTGGTaGGGGAGCTGGTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPHGWSW*GSWCLF
Trigger: AAACAGACACCAGCTCCCTCACCAGCTCCATCCATG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGCATCTGTGTCGCCGTaGGGGATCATGGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAASVSP*GIMASC
Trigger: ACAGGATGCCATGATCCCTCACGGCGACACAGATGC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAACTCTCTCTGTGGCTTaGGTCCTCTCCCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRATLSVA*VLSPSA
Trigger: TGCTGACGGGGAGAGGACTCAAGCCACAGAGAGAGT...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACTGATGCCGGTGGCGTaGGGACTCACCAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGLMPVA*GLTKFP
Trigger: GGGGAACTTGGTGAGTCCTCACGCCACCGGCATCAG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGCTGGCACCCTCACGTaGCCCATGCCCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAAGTLT*PMPMVG
Trigger: CCCCACCATGGGCATGGGTCACGTGAGGGTGCCAGC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCCATCCTTGTGTCTCTaGGTGTGGGCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPPSLCL*VWAGCP
Trigger: AGGACATCCAGCCCACACTCAGAGACACAAGGATGG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTTTGGGTATCGGGTCTaGGGCCTCGGAACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPFGYRV*GLGTSA
Trigger: GGCGCTGGTTCCGAGGCCTCAGACCCGATACCCAAA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACGGACACCCCTGAGATaGTGCCCAGCGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGRTPLR*CPARGM
Trigger: CATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCCGACGCAAAACAGCTaGCAACTGACACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPPTQNS*QLTRSP
Trigger: AGGAGACCGTGTCAGTTGGCAGCTGTTTTGCGTCGG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATTCTGTGGTGTGAGCTaGTGGCACCCTCACGTGACC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAFCGVS*WHPHVT
Trigger: GGTCACGTGAGGGTGCCAGCAGCTCACACCACAGAA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCTTTTGGGGCTCCTATaGGCTTGGCAATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPLLGLL*AWQWQR
Trigger: CCTCTGCCATTGCCAAGCGCATAGGAGCCCCAAAAG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGATAGCTGCCAGCAGTaGAGATCGTTCGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRADSCQQ*RSFALC
Trigger: GCAGAGGGCGAACGATCTGCACTGCTGGCAGCTATC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGGATAGCTGCCAGCAGTaGAGATCGTTCGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLDSCQQ*RSFALC
Trigger: GCAGAGGGCGAACGATCTGCACTGCTGGCAGCTATC...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCCACCTTCCTCAGGCTaGAGGTGCCGCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAPPSSG*RCRCAR
Trigger: GCGGGCACAGCGGCACCTGCAGCCTGAGGAAGGTGG...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGGCTTGCCTTGCGTCTaGGGTGTTGCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPGLPCV*GVAEGA
Trigger: GGCACCCTCAGCAACACCGCAGACGCAAGGCAAGCC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGTCTCGCAGCCCCTGTaGCGGAGCGGATGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAVSQPL*RSGWRP
Trigger: TGGACGCCATCCGCTCCGGCACAGGGGCTGCGAGAC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGCCACCCGCCACCCTTaGAGGACTCGGGCATGCCCT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSATRHP*RTRACP
Trigger: AGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGGAGAACGTGAGTGCATaGATGGGGAGTTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLENVSA*MGSWGS
Trigger: CGACCCCCAACTCCCCATCCATGCACTCACGTTCTC...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCCATCCGGGCTGCAGTaGCTGCCAGACCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHPSGLQ*LPDPRG
Trigger: GCCCCTGGGGTCTGGCAGCCACTGCAGCCCGGATGG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTCCCTTGCCTTTTCATaGGGCTGGCTGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPSLAFS*GWLCSA
Trigger: AGCTGAGCACAGCCAGCCCCATGAAAAGGCAAGGGA...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGGAGTCTGCTCTCTaGATTCTGCGTCTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPLESAL*ILRLRG
Trigger: CCCACGCAGACGCAGAATCCAGAGAGCAGACTCCAA...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCGGCTTGGGGTCTGCTTaGAGTCTGCTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPGLGSA*SLLSGF
Trigger: GAATCCAGAGAGCAGACTCCAAGCAGACCCCAAGCC...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCTATGCGCTTGGCAATaGCAGAGGCCACATACTGGC +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPLCAWQ*QRPHTG
Trigger: GCCAGTATGTGGCCTCTGCCATTGCCAAGCGCATAG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGACCCTCCTGGAGGGTaGGAAGGCTCGCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMADPPGG*EGSPWP
Trigger: AGGCCACGGCGAGCCTTCCCACCCTCCAGGAGGGTC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGACCCTCCTGGAGGGTaGGAAGGCTCGCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIADPPGG*EGSPWP
Trigger: AGGCCACGGCGAGCCTTCCCACCCTCCAGGAGGGTC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACTCCCGCAGAGTGGATaGCTTCCATCAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRALPQSG*LPSGQS
Trigger: ACTCTGCCCTGATGGAAGCCATCCACTCTGCGGGAG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATTCCCTCCCGCAGAGTaGATGGCTTCCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAFPPAE*MASIRA
Trigger: TGCCCTGATGGAAGCCATCCACTCTGCGGGAGGGAA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGTAGGACAGTTTCGCTaGCCTGCCCTCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGVGQFR*PALPGV
Trigger: CACACCGGGGAGGGCAGGCCAGCGAAACTGTCCTAC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTGGCTGTGCTCAGCTTaGAGTGGCGCCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPWLCSA*SGARES
Trigger: AGACTCCCTGGCGCCACTTCAAGCTGAGCACAGCCA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGATGGCTGTGCTCAGCTTaGAGTGGCGCCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGWLCSA*SGARES
Trigger: AGACTCCCTGGCGCCACTTCAAGCTGAGCACAGCCA...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGTGACTTCTGTGGTGTaGGCTGCTGGCACCCTCACG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGVTSVV*AAGTLT
Trigger: CGTGAGGGTGCCAGCAGCTCACACCACAGAAGTCAC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGCTATGCAGACTCCTTaGGTGACGCCTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAAMQTP*VTPVGI
Trigger: TATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCATGCCCTGGCCACATaGTCACGTAGGACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPHALAT*SRRTVF
Trigger: GAAAACAGTCCTACGTGATCATGTGGCCAGGGCATG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCAGGGAGTCTCTCCTaGTGGCAACACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPGSLS*WQHPPS
Trigger: ACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCCTGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCCAGGGAGTCTCTCCTaGTGGCAACACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPPGSLS*WQHPPS
Trigger: ACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCCTGG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCAGGTACTTCCTCCCTTaGCTTTTCATGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPRYFLP*LFMGLA
Trigger: AGCCAGCCCCATGAAAAGGCAAGGGAGGAAGTACCT...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACTTTTGGGGCTCCTATaGGCTTGGCAATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRALLGLL*AWQWQR
Trigger: CCTCTGCCATTGCCAAGCGCATAGGAGCCCCAAAAG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCAGCACTGGCGCCTTaGCTGCATAACCCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPALAP*LHNPSR
Trigger: CCGAGAAGGGTTATGCAGGCAAGGCGCCAGTGCTGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGTGCCCGCGGATAGCTaGCAGCAGTGCAGATCGTTC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPVPADS*QQCRSF
Trigger: GAACGATCTGCACTGCTGGCAGCTATCCGCGGGCAC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCCACCTTCCTCAGGCTaGAGGTGCCGCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHPPSSG*RCRCAR
Trigger: GCGGGCACAGCGGCACCTGCAGCCTGAGGAAGGTGG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGGAGGCCGTCCTTGGTaGAGAGAGAGCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAGGRPW*RESLGG
Trigger: CCCTCCCAGGCTCTCTCTGCACCAAGGACGGCCTCC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR GCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACATCAAGGCTTGCCTTaGGTCTGCGGTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAHQGLP*VCGVAE
Trigger: CTCAGCAACACCGCAGACGCAAGGCAAGCCTTGATG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGTCTCGCAGCCCCTGTaGCGGAGCGGATGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHVSQPL*RSGWRP
Trigger: TGGACGCCATCCGCTCCGGCACAGGGGCTGCGAGAC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGTGGACCCCGAGCAGTaGCTCTGGGAGGCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGVDPEQ*LWEAFV
Trigger: CACAAAAGCCTCCCAGAGGCACTGCTCGGGGTCCAC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGGAGGCCGTCCTTGGTaGAGAGAGAGCCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPGGRPW*RESLPQ
Trigger: CTGAGGAAGGCTCTCTCTGCACCAAGGACGGCCTCC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGCCCAGCGAGAGGGATaGACCCAGCGTAAGAGAACG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGAQREG*TQRKRT
Trigger: CGTTCTCTTACGCTGGGTCCATCCCTCTCGCTGGGC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGGGACTCGGTGGTGGTaGCTGTGGTGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHGTRWW*LWWRGS
Trigger: GCTCCCCCTCCACCACAGCCACCACCACCGAGTCCC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTGGTTGGATGCACCATaGATGGAGCTGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLWLDAP*MELVRE
Trigger: CTCCCTCACCAGCTCCATCCATGGTGCATCCAACCA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGGGAGTCTCTCCTGCTaGCAACACCCTCCGAGTCGA +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPGSLSC*QHPPSR
Trigger: TCGACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCTTTTCCGACGTCATaGGAAGCGGGGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPFPTS*EAGCRA
Trigger: TGCCCTGCACCCCGCTTCCCATGACGTCGGAAAAGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTTGGAGTCTGCTCTCTaGATTCTGCGTCTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLLESAL*ILRLRG
Trigger: CCCACGCAGACGCAGAATCCAGAGAGCAGACTCCAA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGTGCCAGACCCTCCTaGAGGGTGGGAAGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIACARPS*RVGRLA
Trigger: GGCGAGCCTTCCCACCCTCCAGGAGGGTCTGGCACA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGCCCATCCACTCCAGTaGTGGTGTGACCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPAHPLQ*WCDLSH
Trigger: GTGGCTGAGGTCACACCACCACTGGAGTGGATGGGC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCCCGAGCAGTGCCTCTaGGAGGCTTTTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPPEQCL*EAFVAP
Trigger: AGGTGCCACAAAAGCCTCCCAGAGGCACTGCTCGGG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATGTCATCTTTCACAGTaGCAGGTGGTGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRACHLSQ*QVVQPA
Trigger: TGCTGGCTGCACCACCTGTCACTGTGAAAGATGACA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAGCAGCAGGTCTGTCCTaGGTAGACAACTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAAAGLS*VDNFLC
Trigger: ACACAGGAAGTTGTCTACTCAGGACAGACCTGCTGC...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTCCCTGCTGCAGGCCTaGGTGTCAGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPSLLQA*VSDVCG
Trigger: TCCACACACATCTGACACTCAGGCCTGCAGCAGGGA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTGCAGACTCCTTGAGTaGCGCCTGTGGGCATATTAC +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLCRLLE*RLWAYY
Trigger: GTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCAGCTTCCATTCTACCTaGGGCCTAGATCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPSFHST*GLDLRS
Trigger: CGATCTCAGATCTAGGCCTCAGGTAGAATGGAAGCT...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGGACACCCCTGAGATaGTGCCCAGCGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSRTPLR*CPARGM
Trigger: CATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGATTCTGTGGTGTGAGCTaGTGGCACCCTCACGTGACC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGFCGVS*WHPHVT
Trigger: GGTCACGTGAGGGTGCCAGCAGCTCACACCACAGAA...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCTTGGCACACGAGCTaGGCAGCGACACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPWHTS*AATQHL
Trigger: AAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGGCATCCAACATCCCTaGTCCTTGACCCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGGIQHP*SLTLCR
Trigger: CCTGCAGAGGGTCAAGGAGCAGGGATGTTGGATGCC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCCCGACAGCACGAGCTaGTCAGCCTTACTATTGCTT +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLPDSTS*SALLLL
Trigger: AAGCAATAGTAAGGCTGAGCAGCTCGTGCTGTCGGG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGATCAGGGGACTCGGTaGTGGTGGCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIADQGTR*WWLWWR
Trigger: CCTCCACCACAGCCACCACCACCGAGTCCCCTGATC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATCACTGCAGTCTTCCTaGTCTGTGGCCCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRASLQSS*SVAHLS
Trigger: AGACAAGTGGGCCACAGACCAGGAAGACTGCAGTGA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTCACTGCAGTCTTCCTaGTCTGTGGCCCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLSLQSS*SVAHLS
Trigger: AGACAAGTGGGCCACAGACCAGGAAGACTGCAGTGA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGTGCTCAGCTTGAAGTaGCGCCAGGGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPVLSLK*RQGVSP
Trigger: AGGAGAGACTCCCTGGCGCCACTTCAAGCTGAGCAC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGGGGCGATATTGGCTTaGGGTCTGCTTGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPGAILA*GLLGVC
Trigger: GCAGACTCCAAGCAGACCCCAAGCCAATATCGCCCC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCTGCTGGGGCGATATTaGCTTGGGGTCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPLLGRY*LGVCLE
Trigger: CTCCAAGCAGACCCCAAGCCAATATCGCCCCAGCAG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGATGGGCAGACTTCTGCTaGGGCGATATTGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGWADFC*GDIGLG
Trigger: CCCCAAGCCAATATCGCCCCAGCAGAAGTCTGCCCA...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGGGCTCCTATGCGCTTaGCAATGGCAGAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPGLLCA*QWQRPH
Trigger: ATGTGGCCTCTGCCATTGCCAAGCGCATAGGAGCCC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTGTGTGTGGAGGGGGTaGGTCTGTACCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPCVWRG*VCTIRC
Trigger: GCACCTGATGGTACAGACCCACCCCCTCCACACACA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCTCCCGCAGAGTGGATaGCTTCCATCAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPLPQSG*LPSGQS
Trigger: ACTCTGCCCTGATGGAAGCCATCCACTCTGCGGGAG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGATTCCCTCCCGCAGAGTaGATGGCTTCCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGFPPAE*MASIRA
Trigger: TGCCCTGATGGAAGCCATCCACTCTGCGGGAGGGAA...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGTAGGACAGTTTCGCTaGCCTGCCCTCCCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAVGQFR*PALPGV
Trigger: CACACCGGGGAGGGCAGGCCAGCGAAACTGTCCTAC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACAAAACACATTTCCTTaGCACACGAGCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAQNTFP*HTSCAA
Trigger: CGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTTTG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCGTACACAGGCACCGTaGGGGAGGCCTATGTCACTT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPRTQAP*GRPMSL
Trigger: AAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGGGGGAAGCACTAACTaGGGTGGACCCCGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAGGSTN*GGPRAV
Trigger: CACTGCTCGGGGTCCACCCCAGTTAGTGCTTCCCCC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTGGCTGTGCTCAGCTTaGAGTGGCGCCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAWLCSA*SGARES
Trigger: AGACTCCCTGGCGCCACTTCAAGCTGAGCACAGCCA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGTGACTTCTGTGGTGTaGGCTGCTGGCACCCTCACG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAVTSVV*AAGTLT
Trigger: CGTGAGGGTGCCAGCAGCTCACACCACAGAAGTCAC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGTGACTTCTGTGGTGTaGGCTGCTGGCACCCTCACG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSVTSVV*AAGTLT
Trigger: CGTGAGGGTGCCAGCAGCTCACACCACAGAAGTCAC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCATCCTTGTGTCTCTaGGTGTGGGCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPSLCL*VWAGCP
Trigger: AGGACATCCAGCCCACACTCAGAGACACAAGGATGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATGCTTTGCTTTCCACTaGAACCACAGCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRACFAFH*NHSSVP
Trigger: TGGGACAGAGCTGTGGTTTCAGTGGAAAGCAAAGCA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGGACTTTCCGAGCCCTaGGCAGAGAGTGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAGLSEP*AESAAS
Trigger: AGATGCCGCACTCTCTGCTCAGGGCTCGGAAAGTCC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTAACATCCCTGCTCCTTaGCCCTCTGCAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPNIPAP*PSAGFQ
Trigger: CTGGAATCCTGCAGAGGGTCAAGGAGCAGGGATGTT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGAGCGCAACTTTGATCTaGACTCTTGACAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLSATLI*TLDRWA
Trigger: TGCCCACCTGTCAAGAGTTCAGATCAAAGTTGCGCT...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTACAAAGGGAGCCAATaGGCTGTTGGACAAACGCGT +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLYKGSQ*AVGQTR
Trigger: ACGCGTTTGTCCAACAGCTCATTGGCTCCCTTTGTA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTCCGGGCTGCAGTGGCTaGCAGACCCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSPGCSG*QTPGAG
Trigger: GCCTGCCCCTGGGGTCTGGCAGCCACTGCAGCCCGG...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTGGGCAGTGGTTGGATaGACCATGGATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPWAVVG*TMDGAG
Trigger: ACCAGCTCCATCCATGGTGCATCCAACCACTGCCCA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGCTCTCTGGATTCTaGGTCTGCGTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSLLSGF*VCVGTG
Trigger: CCCTGTGCCCACGCAGACGCAGAATCCAGAGAGCAG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTACAGTTTCGCTGGCCTaGCCTCCCCGGTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMATVSLA*PPRCVL
Trigger: CAGAACACACCGGGGAGGGCAGGCCAGCGAAACTGT...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCACAGTTTCGCTGGCCTaGCCTCCCCGGTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSTVSLA*PPRCVL
Trigger: CAGAACACACCGGGGAGGGCAGGCCAGCGAAACTGT...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCTGCAGGTGCCGCTGTaGCCGCGGATAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFLQVPL*PRIAAS
Trigger: GCTGGCAGCTATCCGCGGGCACAGCGGCACCTGCAG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCATCAAGGCTTGCCTTaGGTCTGCGGTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPHQGLP*VCGVAE
Trigger: CTCAGCAACACCGCAGACGCAAGGCAAGCCTTGATG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACATCAAGGCTTGCCTTaGGTCTGCGGTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGHQGLP*VCGVAE
Trigger: CTCAGCAACACCGCAGACGCAAGGCAAGCCTTGATG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGCAGGACTCGGGCATaGCCTGGCCACATGATCACG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIACRTRA*PGHMIT
Trigger: CGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGTCCATGTGGGGCACTaGCCATCCACTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAVHVGH*PSTPVV
Trigger: CACCACTGGAGTGGATGGGCAGTGCCCCACATGGAC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGTCCACCACCCATCGTaGTCTTCCTGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGVHHPS*SSCSPP
Trigger: AGGAGGAGAACAGGAAGAGCACGATGGGTGGTGGAC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGGCTTTTGTGGCACCTaGCGTCCACCACCCATCGTG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSGFCGT*RPPPIV
Trigger: CACGATGGGTGGTGGACGGCAGGTGCCACAAAAGCC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGGAGGCCGTCCTTGGTaGAGAGAGAGCCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSGGRPW*RESLPQ
Trigger: CTGAGGAAGGCTCTCTCTGCACCAAGGACGGCCTCC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTAGGTCCATCATCGCATaGCTCCCATTGAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPRSIIA*LPLSTL
Trigger: GAGCGTGCTCAATGGGAGCCATGCGATGATGGACCT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAAGGTCCATCATCGCATaGCTCCCATTGAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGRSIIA*LPLSTL
Trigger: GAGCGTGCTCAATGGGAGCCATGCGATGATGGACCT...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGCATCCTGTGGGCAGTaGTTGGATGCACCATGGATG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGASCGQ*LDAPWM
Trigger: CATCCATGGTGCATCCAACCACTGCCCACAGGATGC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGATCATGGCATCCTGTaGGCAGTGGTTGGATGCACC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPDHGIL*AVVGCT
Trigger: GGTGCATCCAACCACTGCCCACAGGATGCCATGATC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAAATTCACTCTCTCTGTaGCTTGAGTCCTCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRANSLSL*LESSPR
Trigger: ACGGGGAGAGGACTCAAGCCACAGAGAGAGTGAATT...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGGGTTTTGGCCTCGTTaGTGCCATGATGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPGFWPR*CHDVGA
Trigger: GGCACCAACATCATGGCACCAACGAGGCCAAAACCC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCTTTTCCCTGGGTTTTaGCCTCGTTGGTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLLFPGF*PRWCHD
Trigger: ATCATGGCACCAACGAGGCCAAAACCCAGGGAAAAG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGGCTTGGGGTCTGCTTaGAGTCTGCTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGGLGSA*SLLSGF
Trigger: GAATCCAGAGAGCAGACTCCAAGCAGACCCCAAGCC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGGGTTCCGGCCCTCATaGTGGGCAGACTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHGFRPS*WADFCW
Trigger: CCAGCAGAAGTCTGCCCACCATGAGGGCCGGAACCC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCTCACCACATCAGCATaGACTTTTGGGGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLLTTSA*TFGAPM
Trigger: CATAGGAGCCCCAAAAGTCCATGCTGATGTGGTGAG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCTCGGCATAACCGTGTaGCCTCACCACATCAGCATG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPLGITV*PHHISM
Trigger: CATGCTGATGTGGTGAGGCCACACGGTTATGCCGAG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTGGTGCAGCCAGCACTaGCGCCTTGCCTGCATAACC +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSWCSQH*RLACIT
Trigger: GGTTATGCAGGCAAGGCGCCAGTGCTGGCTGCACCA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCATCAGGTGCGCGTCTaGGCTCAGATGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAHQVRV*AQMLSW
Trigger: CCAGCTCAGCATCTGAGCCCAGACGCGCACCTGATG...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTCGGCCCAAAAATGCTaGGTGGCCAAATACTGTCTG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLSAQKC*VAKYCL
Trigger: CAGACAGTATTTGGCCACCCAGCATTTTTGGGCCGA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCCGAGCAGTGCCTCTaGGAGGCTTTTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSPEQCL*EAFVAP
Trigger: AGGTGCCACAAAAGCCTCCCAGAGGCACTGCTCGGG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGCATCTGTGTCGCCGTaGGGGATCATGGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAASVSP*GIMASC
Trigger: ACAGGATGCCATGATCCCTCACGGCGACACAGATGC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGCATCTGTGTCGCCGTaGGGGATCATGGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSASVSP*GIMASC
Trigger: ACAGGATGCCATGATCCCTCACGGCGACACAGATGC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCACTCTCTCTGTGGCTTaGGTCCTCTCCCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSTLSVA*VLSPSA
Trigger: TGCTGACGGGGAGAGGACTCAAGCCACAGAGAGAGT...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTACTCTCTCTGTGGCTTaGGTCCTCTCCCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMATLSVA*VLSPSA
Trigger: TGCTGACGGGGAGAGGACTCAAGCCACAGAGAGAGT...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCGCTGAACCAAAATTGTaGTGCTCTCAGCGCAACTTT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPAEPKL*CSQRNF
Trigger: AAAGTTGCGCTGAGAGCATCACAATTTTGGTTCAGC...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTACCGCCGCCACCGCTaGCGCCCTCATTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAYRRHR*RPHSLF
Trigger: AAAAAGTGAATGAGGGCGGCAGCGGTGGCGGCGGTA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCCGGGCTGCAGTGGCTaGCAGACCCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDPGCSG*QTPGAG
Trigger: GCCTGCCCCTGGGGTCTGGCAGCCACTGCAGCCCGG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGGGCTCCATCCGGGCTaGAGTGGCTGCCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFGLHPG*SGCQTP
Trigger: TGGGGTCTGGCAGCCACTGCAGCCCGGATGGAGCCC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACTCTGGATTCTGCGTCTaGGTGGGCACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHSGFCV*VGTGVE
Trigger: CTCCACCCCTGTGCCCACGCAGACGCAGAATCCAGA...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGATATTGGCTTGGGGTCTaGTTGGAGTCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGYWLGV*LESALW
Trigger: CCAGAGAGCAGACTCCAAGCAGACCCCAAGCCAATA...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTATTGGCTTGGGGTCTaGTTGGAGTCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPYWLGV*LESALW
Trigger: CCAGAGAGCAGACTCCAAGCAGACCCCAAGCCAATA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCAGGAGGGGCTCCCACTaGCAAATCTTCCCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIARRGSH*QIFPVV
Trigger: AACCACGGGGAAGATTTGGCAGTGGGAGCCCCTCCT...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGATCCATCAGGGCAGAGTaGAGGGATGTGTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGSIRAE*RDVSFG
Trigger: CCCAAAAGACACATCCCTGCACTCTGCCCTGATGGA...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTAGATCGTTCGCCCTCTaGCTCCGTGTAGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPRSFAL*LRVGQF
Trigger: AAACTGTCCTACACGGAGGCAGAGGGCGAACGATCT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTGCAGGTGCCGCTGTaGCCGCGGATAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFLQVPL*PRIAAS
Trigger: GCTGGCAGCTATCCGCGGGCACAGCGGCACCTGCAG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGCGTCCATCAAGGCTTaGCTTGCGTCTGCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAASIKA*LASAVL
Trigger: CAACACCGCAGACGCAAGGCAAGCCTTGATGGACGC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCCGACAGCACGAGCTaGTCAGCCTTACTATTGCTT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPDSTS*SALLLL
Trigger: AAGCAATAGTAAGGCTGAGCAGCTCGTGCTGTCGGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGAGAACGTGAGTGCATaGATGGGGAGTTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSENVSA*MGSWGS
Trigger: CGACCCCCAACTCCCCATCCATGCACTCACGTTCTC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGCCCAGCGAGAGGGATaGACCCAGCGTAAGAGAACG +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHAQREG*TQRKRT
Trigger: CGTTCTCTTACGCTGGGTCCATCCCTCTCGCTGGGC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGTTCCAGCGAGGTCCTaGTCACTGCAGTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAVPARS*SLQSSW
Trigger: CCAGGAAGACTGCAGTGACCAGGACCTCGCTGGAAC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGCCGTGAGGGATCATaGCATCCTGTGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHRREGS*HPVGSG
Trigger: ACCACTGCCCACAGGATGCCATGATCCCTCACGGCG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGTGCTCAGCTTGAAGTaGCGCCAGGGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAVLSLK*RQGVSP
Trigger: AGGAGAGACTCCCTGGCGCCACTTCAAGCTGAGCAC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAAAAGAAGTCACCCTaGGCGCCGTTTCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLQKKSP*APFPLD
Trigger: ATCTAATGGAAACGGCGCCCAGGGTGACTTCTTTTG...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGGGGCGATATTGGCTTaGGGTCTGCTTGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSGAILA*GLLGVC
Trigger: GCAGACTCCAAGCAGACCCCAAGCCAATATCGCCCC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTGTGGTGTGAGCTGCTaGCACCCTCACGTGACCCAT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSCGVSC*HPHVTH
Trigger: ATGGGTCACGTGAGGGTGCCAGCAGCTCACACCACA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTGTGGTGTGAGCTGCTaGCACCCTCACGTGACCCAT +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMACGVSC*HPHVTH
Trigger: ATGGGTCACGTGAGGGTGCCAGCAGCTCACACCACA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAAGGCCACATACTGGCTaGACGTTCTTCTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGRPHTG*TFFSEA
Trigger: AGCCTCAGAGAAGAACGTCCAGCCAGTATGTGGCCT...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTTTCACAGTGACAGGTaGTGCAGCCAGCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAFHSDR*CSQHWR
Trigger: GCGCCAGTGCTGGCTGCACCACCTGTCACTGTGAAA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTCTCTGAGTGTGGGCTaGATGTCCTGTCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLSLSVG*MSCHLS
Trigger: TGAAAGATGACAGGACATCCAGCCCACACTCAGAGA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATCTCTGAGTGTGGGCTaGATGTCCTGTCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRASLSVG*MSCHLS
Trigger: TGAAAGATGACAGGACATCCAGCCCACACTCAGAGA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGCCAAATCTTCCCCGTaGTTGTTGGGAGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGAKSSP*LLGGVT
Trigger: TGTCACTCCTCCCAACAACCACGGGGAAGATTTGGC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGCTCAGATGCTGAGCTaGCCTCCTGGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAAQMLS*PPGYLC
Trigger: GCACAAGTAGCCAGGAGGCCAGCTCAGCATCTGAGC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTGTGTGTGGAGGGGGTaGGTCTGTACCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSCVWRG*VCTIRC
Trigger: GCACCTGATGGTACAGACCCACCCCCTCCACACACA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACTTTCTAGGAGAATGTaGCTTTCTGTGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRALSRRM*LSVPDP
Trigger: AGGGTCTGGCACAGAAAGCCACATTCTCCTAGAAAG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTTCCCTCCCGCAGAGTaGATGGCTTCCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAFPPAE*MASIRA
Trigger: TGCCCTGATGGAAGCCATCCACTCTGCGGGAGGGAA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTGGGCATATTACAGGTaGGTTTCTGCAATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPWAYYR*VSAILW
Trigger: CCAGAGAATTGCAGAAACCCACCTGTAATATGCCCA...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGAGCCAATGAGCTGTTaGACAAACGCGTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGEPMSC*TNASRL
Trigger: CAGCCTTGACGCGTTTGTCCAACAGCTCATTGGCTC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCATGGATGGAGCTGGTaGGGGAGCTGGTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSHGWSW*GSWCLF
Trigger: AAACAGACACCAGCTCCCTCACCAGCTCCATCCATG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCATCCACAGGATCATCTaGAACTTCCCCTATGAATGT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPIHRII*NFPYEC
Trigger: ACATTCATAGGGGAAGTTTCAGATGATCCTGTGGAT...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCTGATGCCGGTGGCGTaGGGACTCACCAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFLMPVA*GLTKFP
Trigger: GGGGAACTTGGTGAGTCCTCACGCCACCGGCATCAG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTACTTTCCCAATGGGCTaGGATTCTGCTTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPTFPMG*DSASGT
Trigger: TGTGCCTGAAGCAGAATCTCAGCCCATTGGGAAAGT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCCTGGCAGAGCTCTCTaGGGGTCGGCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFPGRAL*GSAQVF
Trigger: AAACACCTGGGCCGACCCTCAGAGAGCTCTGCCAGG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCCATCCTTGTGTCTCTaGGTGTGGGCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAPSLCL*VWAGCP
Trigger: AGGACATCCAGCCCACACTCAGAGACACAAGGATGG...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTAGCCCCAAATATTTaGGGAAGAAGAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPLAPNI*GRRIQQ
Trigger: CTGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAA...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCAACATCCCTGCTCCTTaGCCCTCTGCAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSNIPAP*PSAGFQ
Trigger: CTGGAATCCTGCAGAGGGTCAAGGAGCAGGGATGTT...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCAACATCCCTGCTCCTTaGCCCTCTGCAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIANIPAP*PSAGFQ
Trigger: CTGGAATCCTGCAGAGGGTCAAGGAGCAGGGATGTT...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTAGCGCAACTTTGATCTaGACTCTTGACAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPSATLI*TLDRWA
Trigger: TGCCCACCTGTCAAGAGTTCAGATCAAAGTTGCGCT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCTTCCCCGGGAAAGCTaGGAGGCTCCACCACGTCTG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFLPRES*EAPPRL
Trigger: CAGACGTGGTGGAGCCTCTCAGCTTTCCCGGGGAAG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACTACCGCCGCCACCGCTaGCGCCCTCATTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHYRRHR*RPHSLF
Trigger: AAAAAGTGAATGAGGGCGGCAGCGGTGGCGGCGGTA...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCCTCCTTATCCTCAGTaGGGTTGGGGATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHPPYPQ*GWGSGD
Trigger: GTCCCCTGATCCCCAACCGCACTGAGGATAAGGAGG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTATTTCATGCTGTCCTaGTGCGAGTCCAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPYFMLS*CESRET
Trigger: CGTCTCTCTGGACTCGCAGCAGGACAGCATGAAATA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTGGGCAGTGGTTGGATaGACCATGGATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAWAVVG*TMDGAG
Trigger: ACCAGCTCCATCCATGGTGCATCCAACCACTGCCCA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCCAGCGTTTTTATCGTTaGTGTCCTTTTCATTCACCG +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPQRFYR*CPFHSP
Trigger: CGGTGAATGAAAAGGACAGCAACGATAAAAACGCTG...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTGGTGGGCAGACTTCTaGTGGGGCGATATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSWWADF*WGDIGL
Trigger: CAAGCCAATATCGCCCCAGCAGAAGTCTGCCCACCA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTCACTGGCGCCTTGCCTaGATAACCCTTCTCGGCATA +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAHWRLA*ITLLGI
Trigger: TATGCCGAGAAGGGTTATGCAGGCAAGGCGCCAGTG...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCACTGGCGCCTTGCCTaGATAACCCTTCTCGGCATA +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSHWRLA*ITLLGI
Trigger: TATGCCGAGAAGGGTTATGCAGGCAAGGCGCCAGTG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGAATGTGGCTTTCTGTaGCAGACCCTCCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSECGFL*QTLLEG
Trigger: ACCCTCCAGGAGGGTCTGGCACAGAAAGCCACATTC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCCTTGGCACACGAGCTaGGCAGCGACACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHPWHTS*AATQHL
Trigger: AAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTTGGCTGGTAGCTCGTaGCTCACCAAGAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPLAGSS*LTKSLA
Trigger: TGCTAAACTCTTGGTGAGGCACGAGCTACCAGCCAA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGATTGGCTGGTAGCTCGTaGCTCACCAAGAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGLAGSS*LTKSLA
Trigger: TGCTAAACTCTTGGTGAGGCACGAGCTACCAGCCAA...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGATCAGGGGACTCGGTaGTGGTGGCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFDQGTR*WWLWWR
Trigger: CCTCCACCACAGCCACCACCACCGAGTCCCCTGATC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAAGTCTTCCTGGTCTGTaGCCCACTTGTCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRASLPGL*PTCLCI
Trigger: AATACAAAGACAAGTGGGCCACAGACCAGGAAGACT...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGCATCCTGTGGGCAGTaGTTGGATGCACCATGGATG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAASCGQ*LDAPWM
Trigger: CATCCATGGTGCATCCAACCACTGCCCACAGGATGC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGATCATGGCATCCTGTaGGCAGTGGTTGGATGCACC +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMADHGIL*AVVGCT
Trigger: GGTGCATCCAACCACTGCCCACAGGATGCCATGATC...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTCCCTTGCCTTTTCATaGGGCTGGCTGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIASLAFS*GWLCSA
Trigger: AGCTGAGCACAGCCAGCCCCATGAAAAGGCAAGGGA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTTGGAGTCTGCTCTCTaGATTCTGCGTCTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIALESAL*ILRLRG
Trigger: CCCACGCAGACGCAGAATCCAGAGAGCAGACTCCAA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGGCTTGGGGTCTGCTTaGAGTCTGCTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAGLGSA*SLLSGF
Trigger: GAATCCAGAGAGCAGACTCCAAGCAGACCCCAAGCC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGGGTTCCGGCCCTCATaGTGGGCAGACTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFGFRPS*WADFCW
Trigger: CCAGCAGAAGTCTGCCCACCATGAGGGCCGGAACCC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTCGGCATAACCGTGTaGCCTCACCACATCAGCATG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSLGITV*PHHISM
Trigger: CATGCTGATGTGGTGAGGCCACACGGTTATGCCGAG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAAGGCTCGCCGTGGCCTaGGGCGCGCACAGAGCCATT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITRLAVA*GAHRAI
Trigger: AATGGCTCTGTGCGCGCCCCAGGCCACGGCGAGCCT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTAGGCTCGCCGTGGCCTaGGGCGCGCACAGAGCCATT +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSRLAVA*GAHRAI
Trigger: AATGGCTCTGTGCGCGCCCCAGGCCACGGCGAGCCT...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACCCAAAAATGCTGGGTaGCCAAATACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAPKNAG*PNTVCF
Trigger: GAAACAGACAGTATTTGGCCACCCAGCATTTTTGGG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCTGTGCCGGAGCGGATaGCGTCCATCAAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFLCRSG*RPSRLA
Trigger: GGCAAGCCTTGATGGACGCCATCCGCTCCGGCACAG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTGGGCATATTACAGGTaGGTTTCTGCAATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLWAYYR*VSAILW
Trigger: CCAGAGAATTGCAGAAACCCACCTGTAATATGCCCA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCATAAATATTGGTGACTaGGCACCATGTGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPINIGD*APCEKT
Trigger: GGTCTTCTCACATGGTGCCCAGTCACCAATATTTAT...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGGGGGAAGCACTAACTaGGGTGGACCCCGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFGGSTN*GGPRAV
Trigger: CACTGCTCGGGGTCCACCCCAGTTAGTGCTTCCCCC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCAGCGTAAGAGAACGTaGGTGCATGGATGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAQRKRT*VHGWGV
Trigger: AACTCCCCATCCATGCACTCACGTTCTCTTACGCTG...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCACTGAAACTTCCCCTATaGATGTTACTGGGATTGCAT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRALKLPL*MLLGLH
Trigger: ATGCAATCCCAGTAACATTCATAGGGGAAGTTTCAG...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCAATCCACAGGATCATCTaGAACTTCCCCTATGAATGT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAIHRII*NFPYEC
Trigger: ACATTCATAGGGGAAGTTTCAGATGATCCTGTGGAT...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCACCTCCAGAACTCTCTaGCTTTCCCAATGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSTSRTL*LSQWAE
Trigger: CTCAGCCCATTGGGAAAGTCAGAGAGTTCTGGAGGT...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTACCTCCAGAACTCTCTaGCTTTCCCAATGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMATSRTL*LSQWAE
Trigger: CTCAGCCCATTGGGAAAGTCAGAGAGTTCTGGAGGT...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCCTGGCAGAGCTCTCTaGGGGTCGGCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFPGRAL*GSAQVF
Trigger: AAACACCTGGGCCGACCCTCAGAGAGCTCTGCCAGG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTCTGGACGTTCTTCTCTaGGGCTTGAGAAATGTGACT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPLDVLL*GLRNVT
Trigger: AGTCACATTTCTCAAGCCTCAGAGAAGAACGTCCAG...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTGTCATCTTTCACAGTaGCAGGTGGTGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSCHLSQ*QVVQPA
Trigger: TGCTGGCTGCACCACCTGTCACTGTGAAAGATGACA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTCCCTCTGGGAAGACTaGACCAGTGAGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIASLWED*TSEKQE
Trigger: CTCCTGTTTCTCACTGGTTCAGTCTTCCCAGAGGGA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCATGCCCTGGCCACATaGTCACGTAGGACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSHALAT*SRRTVF
Trigger: GAAAACAGTCCTACGTGATCATGTGGCCAGGGCATG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTAGATACCTTTTCCGATaGCTTGTCTTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPRYLFR*LVLHRW
Trigger: CCACCTGTGCAAGACAAGGCATCGGAAAAGGTATCT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGGTCTTCATCAAGTTCTaGAAGGGTTTTACGGAACTC +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLVFIKF*KGFTEL
Trigger: GAGTTCCGTAAAACCCTTGCAGAACTTGATGAAGAC...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCTGCTCTCTGGATTCTaGGTCTGCGTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFLLSGF*VCVGTG
Trigger: CCCTGTGCCCACGCAGACGCAGAATCCAGAGAGCAG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACTGGTGGGCAGACTTCTaGTGGGGCGATATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHWWADF*WGDIGL
Trigger: CAAGCCAATATCGCCCCAGCAGAAGTCTGCCCACCA...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTAGATCGTTCGCCCTCTaGCTCCGTGTAGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMARSFAL*LRVGQF
Trigger: AAACTGTCCTACACGGAGGCAGAGGGCGAACGATCT...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCTCAGAAGCAGAGGATaGCACCTTCCTCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHLRSRG*HLPQAA
Trigger: TGCAGCCTGAGGAAGGTGGCATCCTCTGCTTCTGAG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGTCCATGTGGGGCACTaGCCATCCACTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFVHVGH*PSTPVV
Trigger: CACCACTGGAGTGGATGGGCAGTGCCCCACATGGAC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGTCCACCACCCATCGTaGTCTTCCTGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHVHHPS*SSCSPP
Trigger: AGGAGGAGAACAGGAAGAGCACGATGGGTGGTGGAC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACGCCGAGTCAGGCGCTaGCTACCGCCGCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPRRVRR*LPPPPL
Trigger: CAGCGGTGGCGGCGGTAGCCAGCGCCTGACTCGGCG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR CCA 90 bp TTTTATAAATCACAGCATGCTCAATTGTCCACTGGCAACATGGTCTCCAGGGTGCGCCGAGTCAGGCGCTaGCTACCGCCGCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: FYKSQHAQLSTGNMVSRVRRVRR*LPPPPL
Trigger: CAGCGGTGGCGGCGGTAGCCAGCGCCTGACTCGGCG...CACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCATGCTGTGATTTATAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp AGGAGCCAGCAGCACCTCTGCACAGACATGGTGGTCACAACCTCTGGCATCTTTGAGAACGTGAGTGCATaGATGGGGAGTTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: RSQQHLCTDMVVTTSGIFENVSA*MGSWGS
Trigger: CGACCCCCAACTCCCCATCCATGCACTCACGTTCTC...AAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCAGAGGTGCTGCTGGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGGGACTCGGTGGTGGTaGCTGTGGTGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDGTRWW*LWWRGS
Trigger: GCTCCCCCTCCACCACAGCCACCACCACCGAGTCCC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGATCAGGGGACTCGGTaGTGGTGGCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFDQGTR*WWLWWR
Trigger: CCTCCACCACAGCCACCACCACCGAGTCCCCTGATC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCCCATCCGGGCTGCAGTaGCTGCCAGACCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRPSGLQ*LPDPRG
Trigger: GCCCCTGGGGTCTGGCAGCCACTGCAGCCCGGATGG...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCCTATGAATGTTACTaGGATTGCATCTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPYECY*DCICVA
Trigger: GGCGACACAGATGCAATCCCAGTAACATTCATAGGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGGGAGTCTCTCCTGCTaGCAACACCCTCCGAGTCGA +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFGSLSC*QHPPSR
Trigger: TCGACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACAAAAGAAGTCACCCTaGGCGCCGTTTCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGQKKSP*APFPLD
Trigger: ATCTAATGGAAACGGCGCCCAGGGTGACTTCTTTTG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAGATTCTGCGTCTGCGTaGGCACAGGGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITDSASA*AQGWRG
Trigger: CCCCCTCCACCCCTGTGCCCACGCAGACGCAGAATC...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTTCCGGCCCTCATGGTaGGCAGACTTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFFRPSW*ADFCWG
Trigger: GCCCCAGCAGAAGTCTGCCCACCATGAGGGCCGGAA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTGGGAAGGCTCGCCGTaGCCTGGGGCGCGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRWEGSP*PGARTE
Trigger: CTCTGTGCGCGCCCCAGGCCACGGCGAGCCTTCCCA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGACCCTCCTGGAGGGTaGGAAGGCTCGCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDDPPGG*EGSPWP
Trigger: AGGCCACGGCGAGCCTTCCCACCCTCCAGGAGGGTC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACTTTCTAGGAGAATGTaGCTTTCTGTGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGLSRRM*LSVPDP
Trigger: AGGGTCTGGCACAGAAAGCCACATTCTCCTAGAAAG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCAAAACACATTTCCTTaGCACACGAGCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSQNTFP*HTSCAA
Trigger: CGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTTTG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGATTAAGTGTGAGTGCTaGGCTCCAGCATTTATAGTC +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLIKCEC*APAFIV
Trigger: GACTATAAATGCTGGAGCCCAGCACTCACACTTAAT...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGCCCATCCACTCCAGTaGTGGTGTGACCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFAHPLQ*WCDLSH
Trigger: GTGGCTGAGGTCACACCACCACTGGAGTGGATGGGC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCAAAACAGCTGCCAACTaGCACGGTCTCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFKTAAN*HGLLRL
Trigger: GAGGCGGAGGAGACCGTGTCAGTTGGCAGCTGTTTT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGGAACTCATCACTCCTaGGTCCTCGGTCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFGTHHS*VLGRVL
Trigger: GAGGACACGACCGAGGACTCAGGAGTGATGAGTTCC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACACTGATGCCGGTGGCGTaGGGACTCACCAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITLMPVA*GLTKFP
Trigger: GGGGAACTTGGTGAGTCCTCACGCCACCGGCATCAG...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGCTGGCACCCTCACGTaGCCCATGCCCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRAGTLT*PMPMVG
Trigger: CCCCACCATGGGCATGGGTCACGTGAGGGTGCCAGC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTGCTTTGCTTTCCACTaGAACCACAGCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMACFAFH*NHSSVP
Trigger: TGGGACAGAGCTGTGGTTTCAGTGGAAAGCAAAGCA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCAATCAGTCTAAGGCATaGTTCTTTTTACTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPNQSKA*FFLLCP
Trigger: TGGGCAAAGTAAAAAGAATCATGCCTTAGACTGATT...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGGAGTTGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGCGAACCAAGTTCTGCTaGGACCCGAGGGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: GSCCSVSRVSDLQDDEVLRTKFC*DPRAPS
Trigger: CGATGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCG...CAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGCAGGCTTACCATCGTaGTCTTCCTGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHAGLPS*SSCSPP
Trigger: AGGAGGAGAACAGGAAGAGCACGATGGTAAGCCTGC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCCCGGGCTGCAGTGGCTaGCAGACCCCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPPGCSG*QTPGAG
Trigger: GCCTGCCCCTGGGGTCTGGCAGCCACTGCAGCCCGG...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTATTTCATGCTGTCCTaGTGCGAGTCCAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAYFMLS*CESRET
Trigger: CGTCTCTCTGGACTCGCAGCAGGACAGCATGAAATA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTGTCTTTGTATTTCATaGTGTCCTGCTGCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPCLCIS*CPAASP
Trigger: TGGACTCGCAGCAGGACAGCATGAAATACAAAGACA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCGAGGTCCTGGTCACTaGAGTCTTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFRGPGH*SLPGLW
Trigger: CCACAGACCAGGAAGACTGCAGTGACCAGGACCTCG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGAATGTTACTGGGATTaGATCTGTGTCGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAECYWD*ICVAVR
Trigger: CCTCACGGCGACACAGATGCAATCCCAGTAACATTC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCCAGGGAGTCTCTCCTaGTGGCAACACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFPGSLS*WQHPPS
Trigger: ACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCCTGG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCCAGCACTGGCGCCTTaGCTGCATAACCCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFPALAP*LHNPSR
Trigger: CCGAGAAGGGTTATGCAGGCAAGGCGCCAGTGCTGG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGTGCCCGCGGATAGCTaGCAGCAGTGCAGATCGTTC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFVPADS*QQCRSF
Trigger: GAACGATCTGCACTGCTGGCAGCTATCCGCGGGCAC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTGGCTTGCCTTGCGTCTaGGGTGTTGCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSGLPCV*GVAEGA
Trigger: GGCACCCTCAGCAACACCGCAGACGCAAGGCAAGCC...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGAGCCTTCCTCAGGCTaGAGGTGCCGCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVREPSSG*RCRCAR
Trigger: GCGGGCACAGCGGCACCTGCAGCCTGAGGAAGGCTC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCCGCCGAGTCAGGCGCTaGCTACCGCCGCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISRRVRR*LPPPPL
Trigger: CAGCGGTGGCGGCGGTAGCCAGCGCCTGACTCGGCG...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACCATCCGGGCTGCAGTaGCTGCCAGACCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPPSGLQ*LPDPRG
Trigger: GCCCCTGGGGTCTGGCAGCCACTGCAGCCCGGATGG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTAGTCTTCCTGGTCTGTaGCCCACTTGTCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPSLPGL*PTCLCI
Trigger: AATACAAAGACAAGTGGGCCACAGACCAGGAAGACT...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCCTTTTCCGACGTCATaGGAAGCGGGGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFPFPTS*EAGCRA
Trigger: TGCCCTGCACCCCGCTTCCCATGACGTCGGAAAAGG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCAATTCACTCTCTCTGTaGCTTGAGTCCTCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSNSLSL*LESSPR
Trigger: ACGGGGAGAGGACTCAAGCCACAGAGAGAGTGAATT...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTTTTCCCTGGGTTTTaGCCTCGTTGGTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSLFPGF*PRWCHD
Trigger: ATCATGGCACCAACGAGGCCAAAACCCAGGGAAAAG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTCTGTAGCTTTTCCCTaGGTTTTGGCCTCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMASVAFP*VLASLV
Trigger: CACCAACGAGGCCAAAACCCAGGGAAAAGCTACAGA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGATTCTGCGTCTGCGTaGGCACAGGGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDDSASA*AQGWRG
Trigger: CCCCCTCCACCCCTGTGCCCACGCAGACGCAGAATC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGGGCTCCTATGCGCTTaGCAATGGCAGAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFGLLCA*QWQRPH
Trigger: ATGTGGCCTCTGCCATTGCCAAGCGCATAGGAGCCC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTCACCACATCAGCATaGACTTTTGGGGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSLTTSA*TFGAPM
Trigger: CATAGGAGCCCCAAAAGTCCATGCTGATGTGGTGAG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCTCACCACATCAGCATaGACTTTTGGGGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIALTTSA*TFGAPM
Trigger: CATAGGAGCCCCAAAAGTCCATGCTGATGTGGTGAG...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTGGTGCAGCCAGCACTaGCGCCTTGCCTGCATAACC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFWCSQH*RLACIT
Trigger: GGTTATGCAGGCAAGGCGCCAGTGCTGGCTGCACCA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGCTCAGATGCTGAGCTaGCCTCCTGGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFAQMLS*PPGYLC
Trigger: GCACAAGTAGCCAGGAGGCCAGCTCAGCATCTGAGC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCATGGGAAGGCTCGCCGTaGCCTGGGGCGCGCACAGAG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPWEGSP*PGARTE
Trigger: CTCTGTGCGCGCCCCAGGCCACGGCGAGCCTTCCCA...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGACCCAAAAATGCTGGGTaGCCAAATACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGPKNAG*PNTVCF
Trigger: GAAACAGACAGTATTTGGCCACCCAGCATTTTTGGG...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTCGGCCCAAAAATGCTaGGTGGCCAAATACTGTCTG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSSAQKC*VAKYCL
Trigger: CAGACAGTATTTGGCCACCCAGCATTTTTGGGCCGA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATTTGGGACTGGTCTCTaGACAACAGGTTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: HSSGGVTSATRHPCRTRAFGTGL*TTGLNF
Trigger: AAAATTCAAACCTGTTGTCCAGAGACCAGTCCCAAA...TGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTTTGGGACTGGTCTCTaGACAACAGGTTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLFGTGL*TTGLNF
Trigger: AAAATTCAAACCTGTTGTCCAGAGACCAGTCCCAAA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTCAGGGATGTGTCTTTTaGGACTGGTCTCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAQGCVF*DWSLDN
Trigger: GTTGTCCAGAGACCAGTCCCAAAAGACACATCCCTG...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACACTGTGCCGGAGCGGATaGCGTCCATCAAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITLCRSG*RPSRLA
Trigger: GGCAAGCCTTGATGGACGCCATCCGCTCCGGCACAG...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTCTGTGCCGGAGCGGATaGCGTCCATCAAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSLCRSG*RPSRLA
Trigger: GGCAAGCCTTGATGGACGCCATCCGCTCCGGCACAG...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTGTCACTTCATAGCCTaGGGAATGGCTGTCCATGTG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMACHFIA*GMAVHV
Trigger: CACATGGACAGCCATTCCCCAGGCTATGAAGTGACA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTGTCACTTCATAGCCTaGGGAATGGCTGTCCATGTG +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSCHFIA*GMAVHV
Trigger: CACATGGACAGCCATTCCCCAGGCTATGAAGTGACA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AGCCAGGCGCAAAAAGACAAGCAGGCAAAGGGGAGTTGCTGTTCAGTGAGTAGACATCCACAGGGTTCTTaGCTTTGCTGTGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SQAQKDKQAKGSCCSVSRHPQGS*LCCARG
Trigger: GCCCCGGGCACAGCAAAGCCAAGAACCCTGTGGATG...TCTACTCACTGAACAGCAACTCCCCTTTGCCTGCTTGTCTTTTTGCGCCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGGGGCAGGCTTAGTTTaGGTATCGGGTCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFGAGLV*VSGLRP
Trigger: AGGCCTCAGACCCGATACCCAAACTAAGCCTGCCCC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATCACTTTTTCCGCGCTaGCCCATCGTCCTCCCACGC +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITSLFPR*PIVLPR
Trigger: GCGTGGGAGGACGATGGGTCAGCGCGGAAAAAGTGA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR TCA 90 bp TGTGCCTGGGGAGCCACAGGTAGTAAAATCCAAGGCCAGAGGTCACGTGCTTGTCAGCGTAAGAGAACGTaGGTGCATGGATGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: CAWGATGSKIQGQRSRACQRKRT*VHGWGV
Trigger: AACTCCCCATCCATGCACTCACGTTCTCTTACGCTG...ACAAGCACGTGACCTCTGGCCTTGGATTTTACTACCTGTGGCTCCCCAGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR TCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAGTCTTCTTCATCATTTaGGGCTGTGACAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGVFFII*GCDSFF
Trigger: GAAAAAGCTGTCACAGCCTCAAATGATGAAGAAGAC...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTGTCTTCTTCATCATTTaGGGCTGTGACAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPVFFII*GCDSFF
Trigger: GAAAAAGCTGTCACAGCCTCAAATGATGAAGAAGAC...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATCCACAGGATCATCTaGAACTTCCCCTATGAATGT +
Preference number: 4 (lower is better)
Translates to: GSVHRHRGGGLCHFIAWGIHRII*NFPYEC
Trigger: ACATTCATAGGGGAAGTTTCAGATGATCCTGTGGAT...TCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGTTTAGGTTGTCTGTGTaGAGATTCGAAGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLFRLSV*RFEAKE
Trigger: TTCTTTTGCTTCGAATCTTCACACAGACAACCTAAA...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACACTTTCCCAATGGGCTaGGATTCTGCTTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHTFPMG*DSASGT
Trigger: TGTGCCTGAAGCAGAATCTCAGCCCATTGGGAAAGT...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTCTGGACGTTCTTCTCTaGGGCTTGAGAAATGTGACT +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMALDVLL*GLRNVT
Trigger: AGTCACATTTCTCAAGCCTCAGAGAAGAACGTCCAG...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTTAGCCCCAAATATTTaGGGAAGAAGAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPLAPNI*GRRIQQ
Trigger: CTGCTGGATTCTTCTTCCTCAAATATTTGGGGCTAA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCCAGAAGGCTCCCAGTaGAGTCATCAGGCTCCGTAC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFPEGSQ*SHQAPY
Trigger: GTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTCAAACGCGTCAAGGCTaGACCAAAATTGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAQTRQG*TKIVML
Trigger: GAGCATCACAATTTTGGTTCAGCCTTGACGCGTTTG...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACTACAAAGGGAGCCAATaGGCTGTTGGACAAACGCGT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHYKGSQ*AVGQTR
Trigger: ACGCGTTTGTCCAACAGCTCATTGGCTCCCTTTGTA...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCGAACCAAGTTCTGCTaGGACCCGAGGGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDRTKFC*DPRAPS
Trigger: CGATGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGGGCTCCATCCGGGCTaGAGTGGCTGCCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPGLHPG*SGCQTP
Trigger: TGGGGTCTGGCAGCCACTGCAGCCCGGATGGAGCCC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCCGACGCAAAACAGCTaGCAACTGACACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFPTQNS*QLTRSP
Trigger: AGGAGACCGTGTCAGTTGGCAGCTGTTTTGCGTCGG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGAATGTTACTGGGATTaGATCTGTGTCGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHECYWD*ICVAVR
Trigger: CCTCACGGCGACACAGATGCAATCCCAGTAACATTC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATCTGGATTCTGCGTCTaGGTGGGCACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITSGFCV*VGTGVE
Trigger: CTCCACCCCTGTGCCCACGCAGACGCAGAATCCAGA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTCTTCGGCCCAAAAATaGTGGGTGGCCAAATACTGT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIASSAQK*WVAKYC
Trigger: ACAGTATTTGGCCACCCAGCATTTTTGGGCCGAAGA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAACAGTTTCGCTGGCCTaGCCTCCCCGGTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITTVSLA*PPRCVL
Trigger: CAGAACACACCGGGGAGGGCAGGCCAGCGAAACTGT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGATAGCTGCCAGCAGTaGAGATCGTTCGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFDSCQQ*RSFALC
Trigger: GCAGAGGGCGAACGATCTGCACTGCTGGCAGCTATC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCATAGTCCCATTAACCTaGCAACAAGAATCGTTTATT +
Preference number: 4 (lower is better)
Translates to: WGTAHPLQWWCDLSHPPPIVPLT*QQESFI
Trigger: AATAAACGATTCTTGTTGGCAGGTTAATGGGACTAT...GGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGATAATTAAGTGTGAGTaGTGGGCTCCAGCATTTATA +
Preference number: 4 (lower is better)
Translates to: GTAHPLQWWCDLSHPPPLIIKCE*WAPAFI
Trigger: TATAAATGCTGGAGCCCAGCACTCACACTTAATTAT...CAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTTGCAGGACTCGGGCATaGCCTGGCCACATGATCACG +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSCRTRA*PGHMIT
Trigger: CGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCA...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGGAGTTGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGTCTCCAGGGCCCTGCTaGCTGGAAAGGATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GSCCSVSRVSDLQDDEVLSPGPC*LERMQC
Trigger: GCACTGCATCCTTTCCAGGCAGCAGGGCCCTGGAGA...CAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp GGGAGTTGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGGCCCAGCGAGAGGGATaGACCCAGCGTAAGAGAACG +
Preference number: 4 (lower is better)
Translates to: GSCCSVSRVSDLQDDEVLAQREG*TQRKRT
Trigger: CGTTCTCTTACGCTGGGTCCATCCCTCTCGCTGGGC...CAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGGGACTCGGTGGTGGTaGCTGTGGTGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPGTRWW*LWWRGS
Trigger: GCTCCCCCTCCACCACAGCCACCACCACCGAGTCCC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCCCTATGAATGTTACTaGGATTGCATCTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSPYECY*DCICVA
Trigger: GGCGACACAGATGCAATCCCAGTAACATTCATAGGG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGTGCTCAGCTTGAAGTaGCGCCAGGGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFVLSLK*RQGVSP
Trigger: AGGAGAGACTCCCTGGCGCCACTTCAAGCTGAGCAC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCTCCCTTGCCTTTTCATaGGGCTGGCTGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFSLAFS*GWLCSA
Trigger: AGCTGAGCACAGCCAGCCCCATGAAAAGGCAAGGGA...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTTTTCATTCACCGGTTaGGAATTCACTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPFSFTG*EFTLSV
Trigger: CACAGAGAGAGTGAATTCCCAACCGGTGAATGAAAA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGATTCTGCGTCTGCGTaGGCACAGGGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRDSASA*AQGWRG
Trigger: CCCCCTCCACCCCTGTGCCCACGCAGACGCAGAATC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTGGGCAGACTTCTGCTaGGGCGATATTGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFWADFC*GDIGLG
Trigger: CCCCAAGCCAATATCGCCCCAGCAGAAGTCTGCCCA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCTCACCACATCAGCATaGACTTTTGGGGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHLTTSA*TFGAPM
Trigger: CATAGGAGCCCCAAAAGTCCATGCTGATGTGGTGAG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTTGGTGCAGCCAGCACTaGCGCCTTGCCTGCATAACC +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSWCSQH*RLACIT
Trigger: GGTTATGCAGGCAAGGCGCCAGTGCTGGCTGCACCA...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTCTCTGAGTGTGGGCTaGATGTCCTGTCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMASLSVG*MSCHLS
Trigger: TGAAAGATGACAGGACATCCAGCCCACACTCAGAGA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGCTCAGATGCTGAGCTaGCCTCCTGGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFAQMLS*PPGYLC
Trigger: GCACAAGTAGCCAGGAGGCCAGCTCAGCATCTGAGC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCAGTGTCAGATGTGTGTaGAGGGGGTGGGTCTGTACC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFSVRCV*RGWVCT
Trigger: GGTACAGACCCACCCCCTCCACACACATCTGACACT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTCTTTCTAGGAGAATGTaGCTTTCTGTGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMALSRRM*LSVPDP
Trigger: AGGGTCTGGCACAGAAAGCCACATTCTCCTAGAAAG...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTTTCTAGGAGAATGTaGCTTTCTGTGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSLSRRM*LSVPDP
Trigger: AGGGTCTGGCACAGAAAGCCACATTCTCCTAGAAAG...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCGTACACAGGCACCGTaGGGGAGGCCTATGTCACTT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFRTQAP*GRPMSL
Trigger: AAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGTGATGAAGAGCAATTaGCTGGTAGCTCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHVMKSN*LVARAS
Trigger: TGAGGCACGAGCTACCAGCCAATTGCTCTTCATCAC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AGGAGCCAGCAGCACCTCTGCACAGACATGGTGGTCACAACCTCTGGCATCTTTACCTCTGCACAGACATaGTGGTCACAACCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RSQQHLCTDMVVTTSGIFTSAQT*WSQPLA
Trigger: TGCCAGAGGTTGTGACCACCATGTCTGTGCAGAGGT...AAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCAGAGGTGCTGCTGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTCACTTTTTCCGCGCTaGCCCATCGTCCTCCCACGC +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDSLFPR*PIVLPR
Trigger: GCGTGGGAGGACGATGGGTCAGCGCGGAAAAAGTGA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR TCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTGCATCTGTGTCGCCGTaGGGGATCATGGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSASVSP*GIMASC
Trigger: ACAGGATGCCATGATCCCTCACGGCGACACAGATGC...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAACTCTCTCTGTGGCTTaGGTCCTCTCCCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITTLSVA*VLSPSA
Trigger: TGCTGACGGGGAGAGGACTCAAGCCACAGAGAGAGT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGTGACTTCTGTGGTGTaGGCTGCTGGCACCCTCACG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDVTSVV*AAGTLT
Trigger: CGTGAGGGTGCCAGCAGCTCACACCACAGAAGTCAC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACACCAGAAGGCTCCCAGTaGAGTCATCAGGCTCCGTAC +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITPEGSQ*SHQAPY
Trigger: GTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGG...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTTTGATCTGAACTCTTaGCAGGTGGGCATCCAACAT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAFDLNS*QVGIQH
Trigger: ATGTTGGATGCCCACCTGTCAAGAGTTCAGATCAAA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCAAACGCGTCAAGGCTaGACCAAAATTGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHQTRQG*TKIVML
Trigger: GAGCATCACAATTTTGGTTCAGCCTTGACGCGTTTG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AGGAGCCAGCAGCACCTCTGCACAGACATGGTGGTCACAACCTCTGGCATCTTTGGCCTGAGTAGGGAATaGCGCACAGCAATAAACCAT +
Preference number: 4 (lower is better)
Translates to: RSQQHLCTDMVVTTSGIFGLSRE*RTAINH
Trigger: ATGGTTTATTGCTGTGCGTCATTCCCTACTCAGGCC...AAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCAGAGGTGCTGCTGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR GCA 90 bp TGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGGAGATCATGCGAACCAAGTTCTaGTGCGACCCGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: CCSVSRVSDLQDDEVLEIMRTKF*CDPRAP
Trigger: TGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCGCAT...GATCTCCAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCCGGACACCCCTGAGATaGTGCCCAGCGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRRTPLR*CPARGM
Trigger: CATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCG...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTCCTCCTTATCCTCAGTaGGGTTGGGGATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSPPYPQ*GWGSGD
Trigger: GTCCCCTGATCCCCAACCGCACTGAGGATAAGGAGG...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GGGAGTTGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGCCTCCTTATCCTCAGTaGGGTTGGGGATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GSCCSVSRVSDLQDDEVLPPYPQ*GWGSGD
Trigger: GTCCCCTGATCCCCAACCGCACTGAGGATAAGGAGG...CAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACACCTCCTTATCCTCAGTaGGGTTGGGGATCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITPPYPQ*GWGSGD
Trigger: GTCCCCTGATCCCCAACCGCACTGAGGATAAGGAGG...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGTCTTTGTATTTCATaGTGTCCTGCTGCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIACLCIS*CPAASP
Trigger: TGGACTCGCAGCAGGACAGCATGAAATACAAAGACA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTCGAGGTCCTGGTCACTaGAGTCTTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSRGPGH*SLPGLW
Trigger: CCACAGACCAGGAAGACTGCAGTGACCAGGACCTCG...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCGGTCTGCTTGGAGTCTaGTCTCTGGATTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFGLLGV*SLDSAS
Trigger: AGACGCAGAATCCAGAGAGCAGACTCCAAGCAGACC...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAAGGAGGGGCTCCCACTaGCAAATCTTCCCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITRRGSH*QIFPVV
Trigger: AACCACGGGGAAGATTTGGCAGTGGGAGCCCCTCCT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTTGGCTACTTGTGCTTTaGTTTCCACTGAAACCACAG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAWLLVL*FPLKPQ
Trigger: CTGTGGTTTCAGTGGAAAGCAAAGCACAAGTAGCCA...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGAATGTGGCTTTCTGTaGCAGACCCTCCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFECGFL*QTLLEG
Trigger: ACCCTCCAGGAGGGTCTGGCACAGAAAGCCACATTC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACTCTTCGGCCCAAAAATaGTGGGTGGCCAAATACTGT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHSSAQK*WVAKYC
Trigger: ACAGTATTTGGCCACCCAGCATTTTTGGGCCGAAGA...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCCTGCAGGTGCCGCTGTaGCCGCGGATAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISLQVPL*PRIAAS
Trigger: GCTGGCAGCTATCCGCGGGCACAGCGGCACCTGCAG...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCATCAAGGCTTGCCTTaGGTCTGCGGTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFHQGLP*VCGVAE
Trigger: CTCAGCAACACCGCAGACGCAAGGCAAGCCTTGATG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAGGCATCCAACATCCCTaGTCCTTGACCCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITGIQHP*SLTLCR
Trigger: CCTGCAGAGGGTCAAGGAGCAGGGATGTTGGATGCC...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GAAACCAGGGACAATATGGCAAGCTTTCAGACAGACAGAATTCATTACATTAGACGCCGAGTCAGGCGCTaGCTACCGCCGCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: ETRDNMASFQTDRIHYIRRRVRR*LPPPPL
Trigger: CAGCGGTGGCGGCGGTAGCCAGCGCCTGACTCGGCG...TCTAATGTAATGAATTCTGTCTGTCTGAAAGCTTGCCATATTGTCCCTGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTGTTCCAGCGAGGTCCTaGTCACTGCAGTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSVPARS*SLQSSW
Trigger: CCAGGAAGACTGCAGTGACCAGGACCTCGCTGGAAC...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGATCATGGCATCCTGTaGGCAGTGGTTGGATGCACC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFDHGIL*AVVGCT
Trigger: GGTGCATCCAACCACTGCCCACAGGATGCCATGATC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCCTTTTCCGACGTCATaGGAAGCGGGGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDPFPTS*EAGCRA
Trigger: TGCCCTGCACCCCGCTTCCCATGACGTCGGAAAAGG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATGGGCAGACTTCTGCTaGGGCGATATTGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITWADFC*GDIGLG
Trigger: CCCCAAGCCAATATCGCCCCAGCAGAAGTCTGCCCA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCATCAGGTGCGCGTCTaGGCTCAGATGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDHQVRV*AQMLSW
Trigger: CCAGCTCAGCATCTGAGCCCAGACGCGCACCTGATG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCAGGCTCGCCGTGGCCTaGGGCGCGCACAGAGCCATT +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPRLAVA*GAHRAI
Trigger: AATGGCTCTGTGCGCGCCCCAGGCCACGGCGAGCCT...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCTGTGTCTTTTGGGACTaGTCTCTGGACAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSCVFWD*SLDNRF
Trigger: AAACCTGTTGTCCAGAGACCAGTCCCAAAAGACACA...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGTGTCTTTTGGGACTaGTCTCTGGACAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIACVFWD*SLDNRF
Trigger: AAACCTGTTGTCCAGAGACCAGTCCCAAAAGACACA...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGCCCATCCACTCCAGTaGTGGTGTGACCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDAHPLQ*WCDLSH
Trigger: GTGGCTGAGGTCACACCACCACTGGAGTGGATGGGC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGGAACTCATCACTCCTaGGTCCTCGGTCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDGTHHS*VLGRVL
Trigger: GAGGACACGACCGAGGACTCAGGAGTGATGAGTTCC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTCATGGATGGAGCTGGTaGGGGAGCTGGTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSHGWSW*GSWCLF
Trigger: AAACAGACACCAGCTCCCTCACCAGCTCCATCCATG...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACACATGGATGGAGCTGGTaGGGGAGCTGGTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITHGWSW*GSWCLF
Trigger: AAACAGACACCAGCTCCCTCACCAGCTCCATCCATG...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCATCCACAGGATCATCTaGAACTTCCCCTATGAATGT +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSIHRII*NFPYEC
Trigger: ACATTCATAGGGGAAGTTTCAGATGATCCTGTGGAT...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTTTTAGGTTGTCTGTGTaGAGATTCGAAGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: KAPSEVIRLRTQAPWGRPFRLSV*RFEAKE
Trigger: TTCTTTTGCTTCGAATCTTCACACAGACAACCTAAA...AGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACTGATGCCGGTGGCGTaGGGACTCACCAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPLMPVA*GLTKFP
Trigger: GGGGAACTTGGTGAGTCCTCACGCCACCGGCATCAG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCACTTTCCCAATGGGCTaGGATTCTGCTTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFTFPMG*DSASGT
Trigger: TGTGCCTGAAGCAGAATCTCAGCCCATTGGGAAAGT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACCTGGCAGAGCTCTCTaGGGGTCGGCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPPGRAL*GSAQVF
Trigger: AAACACCTGGGCCGACCCTCAGAGAGCTCTGCCAGG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTGTCATCTTTCACAGTaGCAGGTGGTGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFCHLSQ*QVVQPA
Trigger: TGCTGGCTGCACCACCTGTCACTGTGAAAGATGACA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTCCCTGCTGCAGGCCTaGGTGTCAGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDSLLQA*VSDVCG
Trigger: TCCACACACATCTGACACTCAGGCCTGCAGCAGGGA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAGCTATGCAGACTCCTTaGGTGACGCCTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITAMQTP*VTPVGI
Trigger: TATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGC...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCAGTAACACCAAAACTTaGTGTTCCTGGCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSSNTKT*CSWLCR
Trigger: TCTGCATAGCCAGGAACATCAAGTTTTGGTGTTACT...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCATGCCCTGGCCACATaGTCACGTAGGACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFHALAT*SRRTVF
Trigger: GAAAACAGTCCTACGTGATCATGTGGCCAGGGCATG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTCCAGTGGTGGTGTaGCCTCAGCCACCCGCCACC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSTPVVV*PQPPAT
Trigger: GGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGT...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTAACATCCCTGCTCCTTaGCCCTCTGCAGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSNIPAP*PSAGFQ
Trigger: CTGGAATCCTGCAGAGGGTCAAGGAGCAGGGATGTT...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACGCTGAACCAAAATTGTaGTGCTCTCAGCGCAACTTT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHAEPKL*CSQRNF
Trigger: AAAGTTGCGCTGAGAGCATCACAATTTTGGTTCAGC...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACACCGACGCAAAACAGCTaGCAACTGACACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITPTQNS*QLTRSP
Trigger: AGGAGACCGTGTCAGTTGGCAGCTGTTTTGCGTCGG...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTTCATGCTGTCCTGCTaGGAGTCCAGAGAGACGATG +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFFMLSC*ESRETM
Trigger: CATCGTCTCTCTGGACTCGCAGCAGGACAGCATGAA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCGTCTTCATCAAGTTCTaGAAGGGTTTTACGGAACTC +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAVFIKF*KGFTEL
Trigger: GAGTTCCGTAAAACCCTTGCAGAACTTGATGAAGAC...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCGTCTTCATCAAGTTCTaGAAGGGTTTTACGGAACTC +
Preference number: 4 (lower is better)
Translates to: VIRLRTQAPWGRPMSLHSVFIKF*KGFTEL
Trigger: GAGTTCCGTAAAACCCTTGCAGAACTTGATGAAGAC...GCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTCAGCGTTTTTATCGTTaGTGTCCTTTTCATTCACCG +
Preference number: 4 (lower is better)
Translates to: VHRHRGGGLCHFIAWGMAQRFYR*CPFHSP
Trigger: CGGTGAATGAAAAGGACAGCAACGATAAAAACGCTG...AGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTCTGGATTCTGCGTCTaGGTGGGCACAGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRSGFCV*VGTGVE
Trigger: CTCCACCCCTGTGCCCACGCAGACGCAGAATCCAGA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACAGGAGGGGCTCCCACTaGCAAATCTTCCCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDRRGSH*QIFPVV
Trigger: AACCACGGGGAAGATTTGGCAGTGGGAGCCCCTCCT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAGAATGTGGCTTTCTGTaGCAGACCCTCCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITECGFL*QTLLEG
Trigger: ACCCTCCAGGAGGGTCTGGCACAGAAAGCCACATTC...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGATAGCTGCCAGCAGTaGAGATCGTTCGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDDSCQQ*RSFALC
Trigger: GCAGAGGGCGAACGATCTGCACTGCTGGCAGCTATC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGCGTCCATCAAGGCTTaGCTTGCGTCTGCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDASIKA*LASAVL
Trigger: CAACACCGCAGACGCAAGGCAAGCCTTGATGGACGC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGTCCATGTGGGGCACTaGCCATCCACTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRVHVGH*PSTPVV
Trigger: CACCACTGGAGTGGATGGGCAGTGCCCCACATGGAC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AGCCAGGCGCAAAAAGACAAGCAGGCAAAGGGGAGTTGCTGTTCAGTGAGTAGATTCTTGGCTTTGCTGTaGCCGGGGCTGTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: SQAQKDKQAKGSCCSVSRFLALL*PGLWYS
Trigger: TGAATACCACAGCCCCGGGCACAGCAAAGCCAAGAA...TCTACTCACTGAACAGCAACTCCCCTTTGCCTGCTTGTCTTTTTGCGCCTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp AGTTGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGGAGGCTGCCTGGAAAGGATaGAGTGCGGTCTGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SCCSVSRVSDLQDDEVLEAAWKG*SAVCGD
Trigger: GTCACCACAGACCGCACTGCATCCTTTCCAGGCAGC...CTCCAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp GTTTTACCAGGTAGACAGAAAGTTTCAGTTCTATCCAAATTGACTATACTGGTCCGCCGAGTCAGGCGCTaGCTACCGCCGCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: VLPGRQKVSVLSKLTILVRRVRR*LPPPPL
Trigger: CAGCGGTGGCGGCGGTAGCCAGCGCCTGACTCGGCG...GACCAGTATAGTCAATTTGGATAGAACTGAAACTTTCTGTCTACCTGGTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGTTCCAGCGAGGTCCTaGTCACTGCAGTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDVPARS*SLQSSW
Trigger: CCAGGAAGACTGCAGTGACCAGGACCTCGCTGGAAC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATGGTTGGATGCACCATaGATGGAGCTGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITWLDAP*MELVRE
Trigger: CTCCCTCACCAGCTCCATCCATGGTGCATCCAACCA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATCCCTTGCCTTTTCATaGGGCTGGCTGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITSLAFS*GWLCSA
Trigger: AGCTGAGCACAGCCAGCCCCATGAAAAGGCAAGGGA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAGGGTTTTGGCCTCGTTaGTGCCATGATGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITGFWPR*CHDVGA
Trigger: GGCACCAACATCATGGCACCAACGAGGCCAAAACCC...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCTGCTGGGGCGATATTaGCTTGGGGTCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDLLGRY*LGVCLE
Trigger: CTCCAAGCAGACCCCAAGCCAATATCGCCCCAGCAG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACACTCGGCATAACCGTGTaGCCTCACCACATCAGCATG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITLGITV*PHHISM
Trigger: CATGCTGATGTGGTGAGGCCACACGGTTATGCCGAG...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCAAACAGGAGCTTCTGTaGATAGCAGCAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFKQELL*IAAGLS
Trigger: GGACAGACCTGCTGCTATCCACAGAAGCTCCTGTTT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTGTGCCAGACCCTCCTaGAGGGTGGGAAGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPCARPS*RVGRLA
Trigger: GGCGAGCCTTCCCACCCTCCAGGAGGGTCTGGCACA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATGTGCCAGACCCTCCTaGAGGGTGGGAAGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSCARPS*RVGRLA
Trigger: GGCGAGCCTTCCCACCCTCCAGGAGGGTCTGGCACA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCTCGGCCCAAAAATGCTaGGTGGCCAAATACTGTCTG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFSAQKC*VAKYCL
Trigger: CAGACAGTATTTGGCCACCCAGCATTTTTGGGCCGA...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCATAAATATTGGTGACTaGGCACCATGTGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAINIGD*APCEKT
Trigger: GGTCTTCTCACATGGTGCCCAGTCACCAATATTTAT...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGAGAAACAGGGCCCTGCTGCCTaGAAAGGATGCAGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: CGDGFIFRLIFLSISWEKQGPAA*KGCSAV
Trigger: GACCGCACTGCATCCTTTCCAGGCAGCAGGGCCCTG...TTTCTCCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR TCA 90 bp TGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGAGAAATCACTTTTTCCGCGCTaGCCCATCGTCCTCCCACGC +
Preference number: 4 (lower is better)
Translates to: CGDGFIFRLIFLSISWEKSLFPR*PIVLPR
Trigger: GCGTGGGAGGACGATGGGTCAGCGCGGAAAAAGTGA...TTTCTCCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR TCA 90 bp CGGTCTGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGCAGCGTAAGAGAACGTaGGTGCATGGATGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: RSVVTGSYSGSFSSLLAGQRKRT*VHGWGV
Trigger: AACTCCCCATCCATGCACTCACGTTCTCTTACGCTG...CCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACAGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR TCA 90 bp CTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCTGAAACTTCCCCTATaGATGTTACTGGGATTGCAT +
Preference number: 4 (lower is better)
Translates to: LQDSRRLPVKSSGSVHRHLKLPL*MLLGLH
Trigger: ATGCAATCCCAGTAACATTCATAGGGGAAGTTTCAG...GTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTACCTCCAGAACTCTCTaGCTTTCCCAATGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSTSRTL*LSQWAE
Trigger: CTCAGCCCATTGGGAAAGTCAGAGAGTTCTGGAGGT...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACCTGGCAGAGCTCTCTaGGGGTCGGCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSPGRAL*GSAQVF
Trigger: AAACACCTGGGCCGACCCTCAGAGAGCTCTGCCAGG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATGTCATCTTTCACAGTaGCAGGTGGTGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITCHLSQ*QVVQPA
Trigger: TGCTGGCTGCACCACCTGTCACTGTGAAAGATGACA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAGCAGCAGGTCTGTCCTaGGTAGACAACTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITAAGLS*VDNFLC
Trigger: ACACAGGAAGTTGTCTACTCAGGACAGACCTGCTGC...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTGCAGCAGGTCTGTCCTaGGTAGACAACTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSAAGLS*VDNFLC
Trigger: ACACAGGAAGTTGTCTACTCAGGACAGACCTGCTGC...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATCCCTCTGGGAAGACTaGACCAGTGAGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITSLWED*TSEKQE
Trigger: CTCCTGTTTCTCACTGGTTCAGTCTTCCCAGAGGGA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTTCCCTCTGGGAAGACTaGACCAGTGAGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSSLWED*TSEKQE
Trigger: CTCCTGTTTCTCACTGGTTCAGTCTTCCCAGAGGGA...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCCCAGAAGGCTCCCAGTaGAGTCATCAGGCTCCGTAC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRPEGSQ*SHQAPY
Trigger: GTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGG...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCTCTCAGCGCAACTTTaGTCTGAACTCTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFLSAQL*SELLTG
Trigger: ACCTGTCAAGAGTTCAGATCAAAGTTGCGCTGAGAG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCCTTCCCCGGGAAAGCTaGGAGGCTCCACCACGTCTG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISLPRES*EAPPRL
Trigger: CAGACGTGGTGGAGCCTCTCAGCTTTCCCGGGGAAG...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACGAACCAAGTTCTGCTaGGACCCGAGGGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSRTKFC*DPRAPS
Trigger: CGATGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000395542.6
CDS-3UTR GCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCCGGACACCCCTGAGATaGTGCCCAGCGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISRTPLR*CPARGM
Trigger: CATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCG...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACCAGGGAGTCTCTCCTaGTGGCAACACCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPPGSLS*WQHPPS
Trigger: ACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCCTGG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAAGGTACTTCCTCCCTTaGCTTTTCATGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITRYFLP*LFMGLA
Trigger: AGCCAGCCCCATGAAAAGGCAAGGGAGGAAGTACCT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCAATGGGCTGAGATTCTaGTTCAGGCACAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFNGLRF*FRHRRR
Trigger: TCTTCGTCTGTGCCTGAAGCAGAATCTCAGCCCATT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACTGCTCTCTGGATTCTaGGTCTGCGTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPLLSGF*VCVGTG
Trigger: CCCTGTGCCCACGCAGACGCAGAATCCAGAGAGCAG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATATTGGCTTGGGGTCTaGTTGGAGTCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITYWLGV*LESALW
Trigger: CCAGAGAGCAGACTCCAAGCAGACCCCAAGCCAATA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGGCTTGCCTTGCGTCTaGGGTGTTGCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSGLPCV*GVAEGA
Trigger: GGCACCCTCAGCAACACCGCAGACGCAAGGCAAGCC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCCCTTGGCACACGAGCTaGGCAGCGACACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRPWHTS*AATQHL
Trigger: AAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGG...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGAGAAACAGTCTCCAGGGCCCTaGTGCCTGGAAAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: CGDGFIFRLIFLSISWEKQSPGP*CLERMQ
Trigger: CTGCATCCTTTCCAGGCAGCAGGGCCCTGGAGACTG...TTTCTCCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGTGGACCCCGAGCAGTaGCTCTGGGAGGCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPVDPEQ*LWEAFV
Trigger: CACAAAAGCCTCCCAGAGGCACTGCTCGGGGTCCAC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR GCA 90 bp TGTGCCTGGGGAGCCACAGGTAGTAAAATCCAAGGCCAGAGGTCACGTGCTTGTAGCAATAAACCATCGTaGTCTTCCTGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CAWGATGSKIQGQRSRACSNKPS*SSCSPP
Trigger: AGGAGGAGAACAGGAAGAGCACGATGGTTTATTGCT...ACAAGCACGTGACCTCTGGCCTTGGATTTTACTACCTGTGGCTCCCCAGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp AGTTGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGGAGAGGTCCATCATCGCATaGCTCCCATTGAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: SCCSVSRVSDLQDDEVLERSIIA*LPLSTL
Trigger: GAGCGTGCTCAATGGGAGCCATGCGATGATGGACCT...CTCCAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGCCCAGCGAGAGGGATaGACCCAGCGTAAGAGAACG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPAQREG*TQRKRT
Trigger: CGTTCTCTTACGCTGGGTCCATCCCTCTCGCTGGGC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCGATCAGGGGACTCGGTaGTGGTGGCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPDQGTR*WWLWWR
Trigger: CCTCCACCACAGCCACCACCACCGAGTCCCCTGATC...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTGGTTGGATGCACCATaGATGGAGCTGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDWLDAP*MELVRE
Trigger: CTCCCTCACCAGCTCCATCCATGGTGCATCCAACCA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACGCCGTGAGGGATCATaGCATCCTGTGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPRREGS*HPVGSG
Trigger: ACCACTGCCCACAGGATGCCATGATCCCTCACGGCG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCCCCTATGAATGTTACTaGGATTGCATCTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFPYECY*DCICVA
Trigger: GGCGACACAGATGCAATCCCAGTAACATTCATAGGG...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGGGGCGATATTGGCTTaGGGTCTGCTTGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRGAILA*GLLGVC
Trigger: GCAGACTCCAAGCAGACCCCAAGCCAATATCGCCCC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCCTGCTGGGGCGATATTaGCTTGGGGTCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRLLGRY*LGVCLE
Trigger: CTCCAAGCAGACCCCAAGCCAATATCGCCCCAGCAG...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTTCCGGCCCTCATGGTaGGCAGACTTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISFRPSW*ADFCWG
Trigger: GCCCCAGCAGAAGTCTGCCCACCATGAGGGCCGGAA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATTCCGGCCCTCATGGTaGGCAGACTTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSFRPSW*ADFCWG
Trigger: GCCCCAGCAGAAGTCTGCCCACCATGAGGGCCGGAA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCGGGTTCCGGCCCTCATaGTGGGCAGACTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPGFRPS*WADFCW
Trigger: CCAGCAGAAGTCTGCCCACCATGAGGGCCGGAACCC...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGGGTTCCGGCCCTCATaGTGGGCAGACTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSGFRPS*WADFCW
Trigger: CCAGCAGAAGTCTGCCCACCATGAGGGCCGGAACCC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGGGCTCCTATGCGCTTaGCAATGGCAGAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRGLLCA*QWQRPH
Trigger: ATGTGGCCTCTGCCATTGCCAAGCGCATAGGAGCCC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTATCAGCATGGACTTTTaGGGCTCCTATGCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSISMDF*GSYALG
Trigger: GCCAAGCGCATAGGAGCCCCAAAAGTCCATGCTGAT...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTTTCACAGTGACAGGTaGTGCAGCCAGCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRFHSDR*CSQHWR
Trigger: GCGCCAGTGCTGGCTGCACCACCTGTCACTGTGAAA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTGTGTGTGGAGGGGGTaGGTCTGTACCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRCVWRG*VCTIRC
Trigger: GCACCTGATGGTACAGACCCACCCCCTCCACACACA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGCCCATCCACTCCAGTaGTGGTGTGACCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPAHPLQ*WCDLSH
Trigger: GTGGCTGAGGTCACACCACCACTGGAGTGGATGGGC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTGTCACTTCATAGCCTaGGGAATGGCTGTCCATGTG +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFCHFIA*GMAVHV
Trigger: CACATGGACAGCCATTCCCCAGGCTATGAAGTGACA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCGTGATGAAGAGCAATTaGCTGGTAGCTCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFVMKSN*LVARAS
Trigger: TGAGGCACGAGCTACCAGCCAATTGCTCTTCATCAC...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTGGCTGTGCTCAGCTTaGAGTGGCGCCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISWLCSA*SGARES
Trigger: AGACTCCCTGGCGCCACTTCAAGCTGAGCACAGCCA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGCAGCAGGTCTGTCCTaGGTAGACAACTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDAAGLS*VDNFLC
Trigger: ACACAGGAAGTTGTCTACTCAGGACAGACCTGCTGC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCTTTGATCTGAACTCTTaGCAGGTGGGCATCCAACAT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFFDLNS*QVGIQH
Trigger: ATGTTGGATGCCCACCTGTCAAGAGTTCAGATCAAA...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAACCAGGGACAATATGGCAAGCTTTCAGACAGACAGAATTCATTACATTAGAAAGAGGCTGCCAGGCCTaGGCACAGTCTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KPGTIWQAFRQTEFITLERGCQA*AQSPGP
Trigger: GGGCCCTGGAGACTGTGCTCAGGCCTGGCAGCCTCT...TTCTAATGTAATGAATTCTGTCTGTCTGAAAGCTTGCCATATTGTCCCTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp CTTCATTCTATCCAACATCTATCAGGCCATCTCTCATGGAGATCACTAGAGTATCGGACACCCCTGAGATaGTGCCCAGCGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: LHSIQHLSGHLSWRSLEYRTPLR*CPARGM
Trigger: CATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCG...ATACTCTAGTGATCTCCATGAGAGATGGCCTGATAGATGTTGGATAGAATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCAGATACCTTTTCCGATaGCTTGTCTTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFRYLFR*LVLHRW
Trigger: CCACCTGTGCAAGACAAGGCATCGGAAAAGGTATCT...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTTCATGCTGTCCTGCTaGGAGTCCAGAGAGACGATG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDFMLSC*ESRETM
Trigger: CATCGTCTCTCTGGACTCGCAGCAGGACAGCATGAA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACGAGGTCCTGGTCACTaGAGTCTTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPRGPGH*SLPGLW
Trigger: CCACAGACCAGGAAGACTGCAGTGACCAGGACCTCG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCATTCTGTGGTGTGAGCTaGTGGCACCCTCACGTGACC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPFCGVS*WHPHVT
Trigger: GGTCACGTGAGGGTGCCAGCAGCTCACACCACAGAA...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCTGGCTACTTGTGCTTTaGTTTCCACTGAAACCACAG +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFWLLVL*FPLKPQ
Trigger: CTGTGGTTTCAGTGGAAAGCAAAGCACAAGTAGCCA...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCGCCCTGAGCAGAGAGTaGGGCATCTCGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPALSRE*GISEAL
Trigger: CAGAGCTTCCGAGATGCCGCACTCTCTGCTCAGGGC...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR GCA 90 bp TCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCATAATTAAGTGTGAGTaGTGGGCTCCAGCATTTATA +
Preference number: 4 (lower is better)
Translates to: SSGSVHRHRGGGLCHFIAIIKCE*WAPAFI
Trigger: TATAAATGCTGGAGCCCAGCACTCACACTTAATTAT...GGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATGCAGGACTCGGGCATaGCCTGGCCACATGATCACG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSCRTRA*PGHMIT
Trigger: CGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTGCAGGACTCGGGCATaGCCTGGCCACATGATCACG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISCRTRA*PGHMIT
Trigger: CGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGGCATCCAACATCCCTaGTCCTTGACCCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPGIQHP*SLTLCR
Trigger: CCTGCAGAGGGTCAAGGAGCAGGGATGTTGGATGCC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATTGGCTGGTAGCTCGTaGCTCACCAAGAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITLAGSS*LTKSLA
Trigger: TGCTAAACTCTTGGTGAGGCACGAGCTACCAGCCAA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GTTTTACCAGGTAGACAGAAAGTTTCAGTTCTATCCAAATTGACTATACTGGTCGGGACTCGGTGGTGGTaGCTGTGGTGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLPGRQKVSVLSKLTILVGTRWW*LWWRGS
Trigger: GCTCCCCCTCCACCACAGCCACCACCACCGAGTCCC...GACCAGTATAGTCAATTTGGATAGAACTGAAACTTTCTGTCTACCTGGTAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR CCA 90 bp CTTCATTCTATCCAACATCTATCAGGCCATCTCTCATGGAGATCACTAGAGTATGATCAGGGGACTCGGTaGTGGTGGCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LHSIQHLSGHLSWRSLEYDQGTR*WWLWWR
Trigger: CCTCCACCACAGCCACCACCACCGAGTCCCCTGATC...ATACTCTAGTGATCTCCATGAGAGATGGCCTGATAGATGTTGGATAGAATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACACAAGGGGCTCTTCTaGGGACCCAGGTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSHKGLF*GPRSGV
Trigger: AACCCCAGACCTGGGTCCCCAGAAGAGCCCCTTGTG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGATCATGGCATCCTGTaGGCAGTGGTTGGATGCACC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRDHGIL*AVVGCT
Trigger: GGTGCATCCAACCACTGCCCACAGGATGCCATGATC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGGGAGTCTCTCCTGCTaGCAACACCCTCCGAGTCGA +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSGSLSC*QHPPSR
Trigger: TCGACTCGGAGGGTGTTGCCAGCAGGAGAGACTCCC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGGGTTTTGGCCTCGTTaGTGCCATGATGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRGFWPR*CHDVGA
Trigger: GGCACCAACATCATGGCACCAACGAGGCCAAAACCC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCATGTGGTGTGAGCTGCTaGCACCCTCACGTGACCCAT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPCGVSC*HPHVTH
Trigger: ATGGGTCACGTGAGGGTGCCAGCAGCTCACACCACA...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACAGGCCACATACTGGCTaGACGTTCTTCTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDRPHTG*TFFSEA
Trigger: AGCCTCAGAGAAGAACGTCCAGCCAGTATGTGGCCT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCCTATGCGCTTGGCAATaGCAGAGGCCACATACTGGC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRLCAWQ*QRPHTG
Trigger: GCCAGTATGTGGCCTCTGCCATTGCCAAGCGCATAG...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCATTTCACAGTGACAGGTaGTGCAGCCAGCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPFHSDR*CSQHWR
Trigger: GCGCCAGTGCTGGCTGCACCACCTGTCACTGTGAAA...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAAAACAGGAGCTTCTGTaGATAGCAGCAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITKQELL*IAAGLS
Trigger: GGACAGACCTGCTGCTATCCACAGAAGCTCCTGTTT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGCTGAGCTGGCCTCCTaGCTACTTGTGCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDAELAS*LLVLCF
Trigger: AAAGCAAAGCACAAGTAGCCAGGAGGCCAGCTCAGC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATGTCACTTCATAGCCTaGGGAATGGCTGTCCATGTG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITCHFIA*GMAVHV
Trigger: CACATGGACAGCCATTCCCCAGGCTATGAAGTGACA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAGTGATGAAGAGCAATTaGCTGGTAGCTCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITVMKSN*LVARAS
Trigger: TGAGGCACGAGCTACCAGCCAATTGCTCTTCATCAC...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTCTGGGAGGCTTTTGTaGCACCTGCCGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISSGRLL*HLPSTT
Trigger: GGTGGTGGACGGCAGGTGCCACAAAAGCCTCCCAGA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACCTGGAGGCCGTCCTTaGTGCAGAGAGAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSPGGRP*CRESLP
Trigger: AGGAAGGCTCTCTCTGCACCAAGGACGGCCTCCAGG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCAAAACAGCTGCCAACTaGCACGGTCTCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPKTAAN*HGLLRL
Trigger: GAGGCGGAGGAGACCGTGTCAGTTGGCAGCTGTTTT...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCGGAACTCATCACTCCTaGGTCCTCGGTCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPGTHHS*VLGRVL
Trigger: GAGGACACGACCGAGGACTCAGGAGTGATGAGTTCC...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGGAACTCATCACTCCTaGGTCCTCGGTCGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSGTHHS*VLGRVL
Trigger: GAGGACACGACCGAGGACTCAGGAGTGATGAGTTCC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACCATCCTTGTGTCTCTaGGTGTGGGCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPPSLCL*VWAGCP
Trigger: AGGACATCCAGCCCACACTCAGAGACACAAGGATGG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCCCAGAAGGCTCCCAGTaGAGTCATCAGGCTCCGTAC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISPEGSQ*SHQAPY
Trigger: GTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGG...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTTTGATCTGAACTCTTaGCAGGTGGGCATCCAACAT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFFDLNS*QVGIQH
Trigger: ATGTTGGATGCCCACCTGTCAAGAGTTCAGATCAAA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTCTCTCAGCGCAACTTTaGTCTGAACTCTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSLSAQL*SELLTG
Trigger: ACCTGTCAAGAGTTCAGATCAAAGTTGCGCTGAGAG...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTACAAAGGGAGCCAATaGGCTGTTGGACAAACGCGT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDYKGSQ*AVGQTR
Trigger: ACGCGTTTGTCCAACAGCTCATTGGCTCCCTTTGTA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCAGCAACGTTAATCAGTaGATGCAGAACAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFSNVNQ*MQNSFH
Trigger: ATGGAAGCTGTTCTGCATTCACTGATTAACGTTGCT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGAGAAACAGTGCGGTCTGTGGTaGCGGGTTCATATTCAGGCT +
Preference number: 4 (lower is better)
Translates to: CGDGFIFRLIFLSISWEKQCGLW*RVHIQA
Trigger: AGCCTGAATATGAACCCGTCACCACAGACCGCACTG...TTTCTCCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR TCA 90 bp AGCCAGGCGCAAAAAGACAAGCAGGCAAAGGGGAGTTGCTGTTCAGTGAGTAGAGGAGTTGCTGTTCAGTaGGTAGAGTATCAGATTTGC +
Preference number: 4 (lower is better)
Translates to: SQAQKDKQAKGSCCSVSRGVAVQ*VEYQIC
Trigger: GCAAATCTGATACTCTACTCACTGAACAGCAACTCC...TCTACTCACTGAACAGCAACTCCCCTTTGCCTGCTTGTCTTTTTGCGCCTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR TCA 90 bp TGTGCCTGGGGAGCCACAGGTAGTAAAATCCAAGGCCAGAGGTCACGTGCTTGTCATGTACAACCCTTGTaGCTAGTACTTATCAAATGG +
Preference number: 4 (lower is better)
Translates to: CAWGATGSKIQGQRSRACHVQPL*LVLIKW
Trigger: CCATTTGATAAGTACTAGTCACAAGGGTTGTACATG...ACAAGCACGTGACCTCTGGCCTTGGATTTTACTACCTGTGGCTCCCCAGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR TCA 90 bp TGCACAGACATGGTGGTCACAACCTCTGGCATCTTTATCACATGTACAACCCTTCTCTTCGTAACTGGGTaGGGTTGTGTGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CTDMVVTTSGIFITCTTLLFVTG*GCVTAE
Trigger: CTCTGCAGTCACACAACCTCACCCAGTTACGAAGAG...AAGGGTTGTACATGTGATAAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR TCA 90 bp TGTGCCTGGGGAGCCACAGGTAGTAAAATCCAAGGCCAGAGGTCACGTGCTTGTGAACCAATAATTCTATaGGCAGTATCACTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CAWGATGSKIQGQRSRACEPIIL*AVSLSP
Trigger: AGGGGAAAGTGATACTGCTCATAGAATTATTGGTTC...ACAAGCACGTGACCTCTGGCCTTGGATTTTACTACCTGTGGCTCCCCAGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAAGATACCTTTTCCGATaGCTTGTCTTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITRYLFR*LVLHRW
Trigger: CCACCTGTGCAAGACAAGGCATCGGAAAAGGTATCT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGCAGGCTTACCATCGTaGTCTTCCTGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRAGLPS*SSCSPP
Trigger: AGGAGGAGAACAGGAAGAGCACGATGGTAAGCCTGC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCCGAGGTCCTGGTCACTaGAGTCTTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPRGPGH*SLPGLW
Trigger: CCACAGACCAGGAAGACTGCAGTGACCAGGACCTCG...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGAATGTTACTGGGATTaGATCTGTGTCGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDECYWD*ICVAVR
Trigger: CCTCACGGCGACACAGATGCAATCCCAGTAACATTC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTGGCTACTTGTGCTTTaGTTTCCACTGAAACCACAG +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFWLLVL*FPLKPQ
Trigger: CTGTGGTTTCAGTGGAAAGCAAAGCACAAGTAGCCA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATCTTCGGCCCAAAAATaGTGGGTGGCCAAATACTGT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITSSAQK*WVAKYC
Trigger: ACAGTATTTGGCCACCCAGCATTTTTGGGCCGAAGA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTCCATCAGGGCAGAGTaGAGGGATGTGTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRSIRAE*RDVSFG
Trigger: CCCAAAAGACACATCCCTGCACTCTGCCCTGATGGA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGCGTCCATCAAGGCTTaGCTTGCGTCTGCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSASIKA*LASAVL
Trigger: CAACACCGCAGACGCAAGGCAAGCCTTGATGGACGC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTTACAGGTGGGTTTCTaGAATTCTCTGGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFLQVGF*NSLASV
Trigger: AACAGAGGCCAGAGAATTGCAGAAACCCACCTGTAA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGGCATCCAACATCCCTaGTCCTTGACCCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSGIQHP*SLTLCR
Trigger: CCTGCAGAGGGTCAAGGAGCAGGGATGTTGGATGCC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CGGTCTGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGCTCCATAAACCATCGTaGTCTTCCTGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSVVTGSYSGSFSSLLAGLHKPS*SSCSPP
Trigger: AGGAGGAGAACAGGAAGAGCACGATGGTTTATGGAG...CCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp CCAGGGACAATATGGCAAGCTTTCAGACAGACAGAATTCATTACATTAGAACTGCAGGGTTCTTGGCTTTaGTGTGCCCGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PGTIWQAFRQTEFITLELQGSWL*CARGCG
Trigger: ACCACAGCCCCGGGCACAGCAAAGCCAAGAACCCTG...CAGTTCTAATGTAATGAATTCTGTCTGTCTGAAAGCTTGCCATATTGTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp CGGTCTGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGCAGGCAAAGGGGAGTTaGTGTTCAGTGAGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: RSVVTGSYSGSFSSLLAGQAKGS*CSVSRV
Trigger: TACTCTACTCACTGAACAGCAACTCCCCTTTGCCTG...CCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGAGAACGTGAGTGCATaGATGGGGAGTTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSENVSA*MGSWGS
Trigger: CGACCCCCAACTCCCCATCCATGCACTCACGTTCTC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCGAGAACGTGAGTGCATaGATGGGGAGTTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPENVSA*MGSWGS
Trigger: CGACCCCCAACTCCCCATCCATGCACTCACGTTCTC...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTCATTCTATCCAACATCTATCAGGCCATCTCTCATGGAGATCACTAGAGTATGCCCAGCGAGAGGGATaGACCCAGCGTAAGAGAACG +
Preference number: 4 (lower is better)
Translates to: LHSIQHLSGHLSWRSLEYAQREG*TQRKRT
Trigger: CGTTCTCTTACGCTGGGTCCATCCCTCTCGCTGGGC...ATACTCTAGTGATCTCCATGAGAGATGGCCTGATAGATGTTGGATAGAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp GCTTTAAAAGGGAAGGGAATTCTGTTATATGCTACAATATGGATAAACTTCGAGGGGACTCGGTGGTGGTaGCTGTGGTGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ALKGKGILLYATIWINFEGTRWW*LWWRGS
Trigger: GCTCCCCCTCCACCACAGCCACCACCACCGAGTCCC...CTCGAAGTTTATCCATATTGTAGCATATAACAGAATTCCCTTCCCTTTTAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp TCACAGGAACATTTCCAAGTATCAGTGAATTTCAGACAGGTGAATATTATCAACGGGACTCGGTGGTGGTaGCTGTGGTGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SQEHFQVSVNFRQVNIINGTRWW*LWWRGS
Trigger: GCTCCCCCTCCACCACAGCCACCACCACCGAGTCCC...GTTGATAATATTCACCTGTCTGAAATTCACTGATACTTGGAAATGTTCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR CCA 90 bp GAAACCAGGGACAATATGGCAAGCTTTCAGACAGACAGAATTCATTACATTAGAGATCAGGGGACTCGGTaGTGGTGGCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ETRDNMASFQTDRIHYIRDQGTR*WWLWWR
Trigger: CCTCCACCACAGCCACCACCACCGAGTCCCCTGATC...TCTAATGTAATGAATTCTGTCTGTCTGAAAGCTTGCCATATTGTCCCTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp AAGGAAGTAAATTCTGGGTATACAATGAGCCCTTTTATCCTGAAAGGAGGAAGAGATCAGGGGACTCGGTaGTGGTGGCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KEVNSGYTMSPFILKGGRDQGTR*WWLWWR
Trigger: CCTCCACCACAGCCACCACCACCGAGTCCCCTGATC...TCTTCCTCCTTTCAGGATAAAAGGGCTCATTGTATACCCAGAATTTACTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTATCCTCAGTGCGGTTaGGGATCAGGGGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPYPQCG*GSGDSV
Trigger: CACCGAGTCCCCTGATCCCCAACCGCACTGAGGATA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTATCCTCAGTGCGGTTaGGGATCAGGGGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISYPQCG*GSGDSV
Trigger: CACCGAGTCCCCTGATCCCCAACCGCACTGAGGATA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGTTCCAGCGAGGTCCTaGTCACTGCAGTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSVPARS*SLQSSW
Trigger: CCAGGAAGACTGCAGTGACCAGGACCTCGCTGGAAC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTCCCTATGAATGTTACTaGGATTGCATCTGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSPYECY*DCICVA
Trigger: GGCGACACAGATGCAATCCCAGTAACATTCATAGGG...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCGTGCTCAGCTTGAAGTaGCGCCAGGGAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPVLSLK*RQGVSP
Trigger: AGGAGAGACTCCCTGGCGCCACTTCAAGCTGAGCAC...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGGGTTTTGGCCTCGTTaGTGCCATGATGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPGFWPR*CHDVGA
Trigger: GGCACCAACATCATGGCACCAACGAGGCCAAAACCC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCATTGGAGTCTGCTCTCTaGATTCTGCGTCTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPLESAL*ILRLRG
Trigger: CCCACGCAGACGCAGAATCCAGAGAGCAGACTCCAA...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCGGGGCGATATTGGCTTaGGGTCTGCTTGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISGAILA*GLLGVC
Trigger: GCAGACTCCAAGCAGACCCCAAGCCAATATCGCCCC...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCGGGCTCCTATGCGCTTaGCAATGGCAGAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISGLLCA*QWQRPH
Trigger: ATGTGGCCTCTGCCATTGCCAAGCGCATAGGAGCCC...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCATCAGCATGGACTTTTaGGGCTCCTATGCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRISMDF*GSYALG
Trigger: GCCAAGCGCATAGGAGCCCCAAAAGTCCATGCTGAT...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACTCGGCATAACCGTGTaGCCTCACCACATCAGCATG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPLGITV*PHHISM
Trigger: CATGCTGATGTGGTGAGGCCACACGGTTATGCCGAG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTTTCACAGTGACAGGTaGTGCAGCCAGCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPFHSDR*CSQHWR
Trigger: GCGCCAGTGCTGGCTGCACCACCTGTCACTGTGAAA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGCCAAATCTTCCCCGTaGTTGTTGGGAGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRAKSSP*LLGGVT
Trigger: TGTCACTCCTCCCAACAACCACGGGGAAGATTTGGC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGCTGAGCTGGCCTCCTaGCTACTTGTGCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRAELAS*LLVLCF
Trigger: AAAGCAAAGCACAAGTAGCCAGGAGGCCAGCTCAGC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGCTCAGATGCTGAGCTaGCCTCCTGGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSAQMLS*PPGYLC
Trigger: GCACAAGTAGCCAGGAGGCCAGCTCAGCATCTGAGC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATGTGTGTGGAGGGGGTaGGTCTGTACCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSCVWRG*VCTIRC
Trigger: GCACCTGATGGTACAGACCCACCCCCTCCACACACA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAAGTGTCAGATGTGTGTaGAGGGGGTGGGTCTGTACC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPSVRCV*RGWVCT
Trigger: GGTACAGACCCACCCCCTCCACACACATCTGACACT...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACTCCCGCAGAGTGGATaGCTTCCATCAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSLPQSG*LPSGQS
Trigger: ACTCTGCCCTGATGGAAGCCATCCACTCTGCGGGAG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTTCCCTCCCGCAGAGTaGATGGCTTCCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPFPPAE*MASIRA
Trigger: TGCCCTGATGGAAGCCATCCACTCTGCGGGAGGGAA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACGTACACAGGCACCGTaGGGGAGGCCTATGTCACTT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSRTQAP*GRPMSL
Trigger: AAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCGAGCCAATGAGCTGTTaGACAAACGCGTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVREPMSC*TNASRL
Trigger: CAGCCTTGACGCGTTTGTCCAACAGCTCATTGGCTC...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCATAAATATTGGTGACTaGGCACCATGTGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFINIGD*APCEKT
Trigger: GGTCTTCTCACATGGTGCCCAGTCACCAATATTTAT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCGGGGCAGGCTTAGTTTaGGTATCGGGTCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPGAGLV*VSGLRP
Trigger: AGGCCTCAGACCCGATACCCAAACTAAGCCTGCCCC...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395542.6
ENST00000431948.5
3UTR CAA 72 bp ACACCAAAACTTGATGTTCCTGGCTATGCAGACTCCTaGAGTGACGCCTGTGGGCATATTACAGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TPKLDVPGYADS*SDACGHITGGF
Trigger: AAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAGTTTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
3UTR CAA 72 bp AAGGGGAGTTGCTGTTCAGTGAGTAGAGTATCAGATTaGCAGGACGATGAGGTCCTGGAGATCGGTTTCACA +
Preference number: 4 (lower is better)
Translates to: KGSCCSVSRVSD*QDDEVLEIGFT
Trigger: TGTGAAACCGATCTCCAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR TCA 90 bp AAGGAAGTAAATTCTGGGTATACAATGAGCCCTTTTATCCTGAAAGGAGGAAGATCACTTTTTCCGCGCTaGCCCATCGTCCTCCCACGC +
Preference number: 4 (lower is better)
Translates to: KEVNSGYTMSPFILKGGRSLFPR*PIVLPR
Trigger: GCGTGGGAGGACGATGGGTCAGCGCGGAAAAAGTGA...TCTTCCTCCTTTCAGGATAAAAGGGCTCATTGTATACCCAGAATTTACTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACAGCGTAAGAGAACGTaGGTGCATGGATGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPQRKRT*VHGWGV
Trigger: AACTCCCCATCCATGCACTCACGTTCTCTTACGCTG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTGAAACTTCCCCTATaGATGTTACTGGGATTGCAT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFLKLPL*MLLGLH
Trigger: ATGCAATCCCAGTAACATTCATAGGGGAAGTTTCAG...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTGCTTTGCTTTCCACTaGAACCACAGCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRCFAFH*NHSSVP
Trigger: TGGGACAGAGCTGTGGTTTCAGTGGAAAGCAAAGCA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCGCTATGCAGACTCCTTaGGTGACGCCTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPAMQTP*VTPVGI
Trigger: TATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGC...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAGCTGAACCAAAATTGTaGTGCTCTCAGCGCAACTTT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITAEPKL*CSQRNF
Trigger: AAAGTTGCGCTGAGAGCATCACAATTTTGGTTCAGC...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCAGCTTCCATTCTACCTaGGGCCTAGATCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRSFHST*GLDLRS
Trigger: CGATCTCAGATCTAGGCCTCAGGTAGAATGGAAGCT...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TCTCTAGTTAGAAAACGTGAGCTACCATCTTTTGTGGATAGGGTGTATGACATGCAGAAGCGCTTGGCCTaGGTAGGGAATGACGCACAG +
Preference number: 4 (lower is better)
Translates to: SLVRKRELPSFVDRVYDMQKRLA*VGNDAQ
Trigger: CTGTGCGTCATTCCCTACTCAGGCCAAGCGCTTCTG...CATGTCATACACCCTATCCACAAAAGATGGTAGCTCACGTTTTCTAACTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR GCA 90 bp GTTTTACCAGGTAGACAGAAAGTTTCAGTTCTATCCAAATTGACTATACTGGTCCGAACCAAGTTCTGCTaGGACCCGAGGGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: VLPGRQKVSVLSKLTILVRTKFC*DPRAPS
Trigger: CGATGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCG...GACCAGTATAGTCAATTTGGATAGAACTGAAACTTTCTGTCTACCTGGTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATGTCTTTGTATTTCATaGTGTCCTGCTGCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITCLCIS*CPAASP
Trigger: TGGACTCGCAGCAGGACAGCATGAAATACAAAGACA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTGGGCAGTGGTTGGATaGACCATGGATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPWAVVG*TMDGAG
Trigger: ACCAGCTCCATCCATGGTGCATCCAACCACTGCCCA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATGGGCAGTGGTTGGATaGACCATGGATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSWAVVG*TMDGAG
Trigger: ACCAGCTCCATCCATGGTGCATCCAACCACTGCCCA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAAGGTACTTCCTCCCTTaGCTTTTCATGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPRYFLP*LFMGLA
Trigger: AGCCAGCCCCATGAAAAGGCAAGGGAGGAAGTACCT...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACAATGGGCTGAGATTCTaGTTCAGGCACAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDNGLRF*FRHRRR
Trigger: TCTTCGTCTGTGCCTGAAGCAGAATCTCAGCCCATT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGGTCTGCTTGGAGTCTaGTCTCTGGATTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPGLLGV*SLDSAS
Trigger: AGACGCAGAATCCAGAGAGCAGACTCCAAGCAGACC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTGGTGGGCAGACTTCTaGTGGGGCGATATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISWWADF*WGDIGL
Trigger: CAAGCCAATATCGCCCCAGCAGAAGTCTGCCCACCA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATGGTGGGCAGACTTCTaGTGGGGCGATATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSWWADF*WGDIGL
Trigger: CAAGCCAATATCGCCCCAGCAGAAGTCTGCCCACCA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACACTGGCGCCTTGCCTaGATAACCCTTCTCGGCATA +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSHWRLA*ITLLGI
Trigger: TATGCCGAGAAGGGTTATGCAGGCAAGGCGCCAGTG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCCACTGGCGCCTTGCCTaGATAACCCTTCTCGGCATA +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPHWRLA*ITLLGI
Trigger: TATGCCGAGAAGGGTTATGCAGGCAAGGCGCCAGTG...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGAATGTGGCTTTCTGTaGCAGACCCTCCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSECGFL*QTLLEG
Trigger: ACCCTCCAGGAGGGTCTGGCACAGAAAGCCACATTC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTCTTCGGCCCAAAAATaGTGGGTGGCCAAATACTGT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDSSAQK*WVAKYC
Trigger: ACAGTATTTGGCCACCCAGCATTTTTGGGCCGAAGA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCATCCATCAGGGCAGAGTaGAGGGATGTGTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPSIRAE*RDVSFG
Trigger: CCCAAAAGACACATCCCTGCACTCTGCCCTGATGGA...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACTCAGAAGCAGAGGATaGCACCTTCCTCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSLRSRG*HLPQAA
Trigger: TGCAGCCTGAGGAAGGTGGCATCCTCTGCTTCTGAG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265136.12
ENST00000431948.5
CDS-3UTR GCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATTACAGGTGGGTTTCTaGAATTCTCTGGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITLQVGF*NSLASV
Trigger: AACAGAGGCCAGAGAATTGCAGAAACCCACCTGTAA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGCACAGACATGGTGGTCACAACCTCTGGCATCTTTATCACATGTACAACCCTTGTGAGGTTGTGTGACTaGAGAGGGATCTCACACTCA +
Preference number: 4 (lower is better)
Translates to: CTDMVVTTSGIFITCTTLVRLCD*RGISHS
Trigger: TGAGTGTGAGATCCCTCTGCAGTCACACAACCTCAC...AAGGGTTGTACATGTGATAAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp ACACTGATTTCAGGAGGAACATTTAGAAGTCGGTCCATAGAAAACACCTTCACAGAGAACGTGAGTGCATaGATGGGGAGTTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: TLISGGTFRSRSIENTFTENVSA*MGSWGS
Trigger: CGACCCCCAACTCCCCATCCATGCACTCACGTTCTC...TGTGAAGGTGTTTTCTATGGACCGACTTCTAAATGTTCCTCCTGAAATCAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp AAGGAAGTAAATTCTGGGTATACAATGAGCCCTTTTATCCTGAAAGGAGGAAGAGCCCAGCGAGAGGGATaGACCCAGCGTAAGAGAACG +
Preference number: 4 (lower is better)
Translates to: KEVNSGYTMSPFILKGGRAQREG*TQRKRT
Trigger: CGTTCTCTTACGCTGGGTCCATCCCTCTCGCTGGGC...TCTTCCTCCTTTCAGGATAAAAGGGCTCATTGTATACCCAGAATTTACTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCGCATCCTGTGGGCAGTaGTTGGATGCACCATGGATG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISASCGQ*LDAPWM
Trigger: CATCCATGGTGCATCCAACCACTGCCCACAGGATGC...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGCATCCTGTGGGCAGTaGTTGGATGCACCATGGATG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSASCGQ*LDAPWM
Trigger: CATCCATGGTGCATCCAACCACTGCCCACAGGATGC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCAAAAGAAGTCACCCTaGGCGCCGTTTCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDQKKSP*APFPLD
Trigger: ATCTAATGGAAACGGCGCCCAGGGTGACTTCTTTTG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTCTGTAGCTTTTCCCTaGGTTTTGGCCTCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRSVAFP*VLASLV
Trigger: CACCAACGAGGCCAAAACCCAGGGAAAAGCTACAGA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACTATGCGCTTGGCAATaGCAGAGGCCACATACTGGC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSLCAWQ*QRPHTG
Trigger: GCCAGTATGTGGCCTCTGCCATTGCCAAGCGCATAG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCCTATGCGCTTGGCAATaGCAGAGGCCACATACTGGC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISLCAWQ*QRPHTG
Trigger: GCCAGTATGTGGCCTCTGCCATTGCCAAGCGCATAG...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTCTCTGAGTGTGGGCTaGATGTCCTGTCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDSLSVG*MSCHLS
Trigger: TGAAAGATGACAGGACATCCAGCCCACACTCAGAGA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCAGTGTCAGATGTGTGTaGAGGGGGTGGGTCTGTACC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISSVRCV*RGWVCT
Trigger: GGTACAGACCCACCCCCTCCACACACATCTGACACT...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAAGTGTCAGATGTGTGTaGAGGGGGTGGGTCTGTACC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSSVRCV*RGWVCT
Trigger: GGTACAGACCCACCCCCTCCACACACATCTGACACT...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATGTGTCTTTTGGGACTaGTCTCTGGACAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITCVFWD*SLDNRF
Trigger: AAACCTGTTGTCCAGAGACCAGTCCCAAAAGACACA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACATGGGCATATTACAGGTaGGTTTCTGCAATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITWAYYR*VSAILW
Trigger: CCAGAGAATTGCAGAAACCCACCTGTAATATGCCCA...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCATTAAGTGTGAGTGCTaGGCTCCAGCATTTATAGTC +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFIKCEC*APAFIV
Trigger: GACTATAAATGCTGGAGCCCAGCACTCACACTTAAT...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AGCCAGGCGCAAAAAGACAAGCAGGCAAAGGGGAGTTGCTGTTCAGTGAGTAGAAAACCAGGGACAATATaGCAAGCTTTCAGACAGACA +
Preference number: 4 (lower is better)
Translates to: SQAQKDKQAKGSCCSVSRKPGTI*QAFRQT
Trigger: TGTCTGTCTGAAAGCTTGCCATATTGTCCCTGGTTT...TCTACTCACTGAACAGCAACTCCCCTTTGCCTGCTTGTCTTTTTGCGCCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp TGCACAGACATGGTGGTCACAACCTCTGGCATCTTTATCACATGTACAACCCTTCTACTCTGCCTGTCTTaGGACAATGCAGTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: CTDMVVTTSGIFITCTTLLLCLS*DNAVEV
Trigger: CACCTCAACTGCATTGTCCCAAGACAGGCAGAGTAG...AAGGGTTGTACATGTGATAAAGATGCCAGAGGTTGTGACCACCATGTCTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp TGTGCCTGGGGAGCCACAGGTAGTAAAATCCAAGGCCAGAGGTCACGTGCTTGTCATTTGCTACAGAATTaGTATTCCCAAGGGATTCTT +
Preference number: 4 (lower is better)
Translates to: CAWGATGSKIQGQRSRACHLLQN*YSQGIL
Trigger: AAGAATCCCTTGGGAATACCAATTCTGTAGCAAATG...ACAAGCACGTGACCTCTGGCCTTGGATTTTACTACCTGTGGCTCCCCAGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR TCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACAGCGTAAGAGAACGTaGGTGCATGGATGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSQRKRT*VHGWGV
Trigger: AACTCCCCATCCATGCACTCACGTTCTCTTACGCTG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCCAGCGTAAGAGAACGTaGGTGCATGGATGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISQRKRT*VHGWGV
Trigger: AACTCCCCATCCATGCACTCACGTTCTCTTACGCTG...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp GACTCCTTGAGTGACGCCTGTGGGCATATTACAGGTGGGTTTCTGCAATTCTCTGTCTTCTTCATCATTTaGGGCTGTGACAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DSLSDACGHITGGFLQFSVFFII*GCDSFF
Trigger: GAAAAAGCTGTCACAGCCTCAAATGATGAAGAAGAC...AGAGAATTGCAGAAACCCACCTGTAATATGCCCACAGGCGTCACTCAAGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAACTTTCCCAATGGGCTaGGATTCTGCTTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPTFPMG*DSASGT
Trigger: TGTGCCTGAAGCAGAATCTCAGCCCATTGGGAAAGT...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCACCTCCAGAACTCTCTaGCTTTCCCAATGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISTSRTL*LSQWAE
Trigger: CTCAGCCCATTGGGAAAGTCAGAGAGTTCTGGAGGT...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTCCCTCTGGGAAGACTaGACCAGTGAGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISSLWED*TSEKQE
Trigger: CTCCTGTTTCTCACTGGTTCAGTCTTCCCAGAGGGA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCATGCTTTGCTTTCCACTaGAACCACAGCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPCFAFH*NHSSVP
Trigger: TGGGACAGAGCTGTGGTTTCAGTGGAAAGCAAAGCA...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTGCAGACTCCTTGAGTaGCGCCTGTGGGCATATTAC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISCRLLE*RLWAYY
Trigger: GTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAAGTAACACCAAAACTTaGTGTTCCTGGCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITSNTKT*CSWLCR
Trigger: TCTGCATAGCCAGGAACATCAAGTTTTGGTGTTACT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACATGCCCTGGCCACATaGTCACGTAGGACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSHALAT*SRRTVF
Trigger: GAAAACAGTCCTACGTGATCATGTGGCCAGGGCATG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGCTGAACCAAAATTGTaGTGCTCTCAGCGCAACTTT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDAEPKL*CSQRNF
Trigger: AAAGTTGCGCTGAGAGCATCACAATTTTGGTTCAGC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAAGCTTCCATTCTACCTaGGGCCTAGATCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPSFHST*GLDLRS
Trigger: CGATCTCAGATCTAGGCCTCAGGTAGAATGGAAGCT...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAAGCAACGTTAATCAGTaGATGCAGAACAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITSNVNQ*MQNSFH
Trigger: ATGGAAGCTGTTCTGCATTCACTGATTAACGTTGCT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp CGGTCTGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGGGAAATTGTGCTAAGTaGAATAAGCCAGGCGCAAAA +
Preference number: 4 (lower is better)
Translates to: RSVVTGSYSGSFSSLLAGGNCAK*NKPGAK
Trigger: TTTTGCGCCTGGCTTATTTCACTTAGCACAATTTCC...CCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACAGACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp GGGACAATATGGCAAGCTTTCAGACAGACAGAATTCATTACATTAGAACTGTGTTACCGCCGCCACCGCTaGCGCCCTCATTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: GTIWQAFRQTEFITLELCYRRHR*RPHSLF
Trigger: AAAAAGTGAATGAGGGCGGCAGCGGTGGCGGCGGTA...ACACAGTTCTAATGTAATGAATTCTGTCTGTCTGAAAGCTTGCCATATTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp TCACAGGAACATTTCCAAGTATCAGTGAATTTCAGACAGGTGAATATTATCAACCGAACCAAGTTCTGCTaGGACCCGAGGGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: SQEHFQVSVNFRQVNIINRTKFC*DPRAPS
Trigger: CGATGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCG...GTTGATAATATTCACCTGTCTGAAATTCACTGATACTTGGAAATGTTCCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR GCA 90 bp GTTTTACCAGGTAGACAGAAAGTTTCAGTTCTATCCAAATTGACTATACTGGTCATGCGAACCAAGTTCTaGTGCGACCCGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VLPGRQKVSVLSKLTILVMRTKF*CDPRAP
Trigger: TGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCGCAT...GACCAGTATAGTCAATTTGGATAGAACTGAAACTTTCTGTCTACCTGGTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR GCA 90 bp GAAGGGAATTCTGTTATATGCTACAATATGGATAAACTTCGAGGAAATTGTGCTCGGACACCCCTGAGATaGTGCCCAGCGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: EGNSVICYNMDKLRGNCARTPLR*CPARGM
Trigger: CATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCG...AGCACAATTTCCTCGAAGTTTATCCATATTGTAGCATATAACAGAATTCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp TTTAGGCACTTAGTTTTACCAGGTAGACAGAAAGTTTCAGTTCTATCCAAATTGCGGACACCCCTGAGATaGTGCCCAGCGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: FRHLVLPGRQKVSVLSKLRTPLR*CPARGM
Trigger: CATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCG...CAATTTGGATAGAACTGAAACTTTCTGTCTACCTGGTAAAACTAAGTGCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR GCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATTCATGCTGTCCTGCTaGGAGTCCAGAGAGACGATG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSFMLSC*ESRETM
Trigger: CATCGTCTCTCTGGACTCGCAGCAGGACAGCATGAA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAGAATGTTACTGGGATTaGATCTGTGTCGCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPECYWD*ICVAVR
Trigger: CCTCACGGCGACACAGATGCAATCCCAGTAACATTC...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCGGTCTGCTTGGAGTCTaGTCTCTGGATTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISGLLGV*SLDSAS
Trigger: AGACGCAGAATCCAGAGAGCAGACTCCAAGCAGACC...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTATTGGCTTGGGGTCTaGTTGGAGTCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISYWLGV*LESALW
Trigger: CCAGAGAGCAGACTCCAAGCAGACCCCAAGCCAATA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTCCATCAGGGCAGAGTaGAGGGATGTGTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPSIRAE*RDVSFG
Trigger: CCCAAAAGACACATCCCTGCACTCTGCCCTGATGGA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCAGATCGTTCGCCCTCTaGCTCCGTGTAGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISRSFAL*LRVGQF
Trigger: AAACTGTCCTACACGGAGGCAGAGGGCGAACGATCT...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCAGATCGTTCGCCCTCTaGCTCCGTGTAGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPRSFAL*LRVGQF
Trigger: AAACTGTCCTACACGGAGGCAGAGGGCGAACGATCT...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTTACAGGTGGGTTTCTaGAATTCTCTGGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDLQVGF*NSLASV
Trigger: AACAGAGGCCAGAGAATTGCAGAAACCCACCTGTAA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AGTTGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGGAGTATCACAGCTTCAGCTaGTCCATAAACCATCGTGCT +
Preference number: 4 (lower is better)
Translates to: SCCSVSRVSDLQDDEVLEYHSFS*SINHRA
Trigger: AGCACGATGGTTTATGGAGCAGCTGAAGCTGTGATA...CTCCAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR GCA 90 bp TGTGGTGACGGGTTCATATTCAGGCTCATTTTCCTCTCTATTAGCTGGGAGAAAGATTGTGTAGAGAACTaGGGCCCTCACTCATCCACA +
Preference number: 4 (lower is better)
Translates to: CGDGFIFRLIFLSISWEKDCVEN*GPHSST
Trigger: TGTGGATGAGTGAGGGCCGCAGTTCTCTACACAATC...TTTCTCCCAGCTAATAGAGAGGAAAATGAGCCTGAATATGAACCCGTCACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp TCTCTAGTTAGAAAACGTGAGCTACCATCTTTTGTGGATAGGGTGTATGACATGAGGTCCATCATCGCATaGCTCCCATTGAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: SLVRKRELPSFVDRVYDMRSIIA*LPLSTL
Trigger: GAGCGTGCTCAATGGGAGCCATGCGATGATGGACCT...CATGTCATACACCCTATCCACAAAAGATGGTAGCTCACGTTTTCTAACTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp AAGGAAGTAAATTCTGGGTATACAATGAGCCCTTTTATCCTGAAAGGAGGAAGAGAGAACGTGAGTGCATaGATGGGGAGTTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: KEVNSGYTMSPFILKGGRENVSA*MGSWGS
Trigger: CGACCCCCAACTCCCCATCCATGCACTCACGTTCTC...TCTTCCTCCTTTCAGGATAAAAGGGCTCATTGTATACCCAGAATTTACTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR CCA 90 bp GAAACCAGGGACAATATGGCAAGCTTTCAGACAGACAGAATTCATTACATTAGATATCCTCAGTGCGGTTaGGGATCAGGGGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: ETRDNMASFQTDRIHYIRYPQCG*GSGDSV
Trigger: CACCGAGTCCCCTGATCCCCAACCGCACTGAGGATA...TCTAATGTAATGAATTCTGTCTGTCTGAAAGCTTGCCATATTGTCCCTGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACAGTCTTCCTGGTCTGTaGCCCACTTGTCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDSLPGL*PTCLCI
Trigger: AATACAAAGACAAGTGGGCCACAGACCAGGAAGACT...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTCACTGCAGTCTTCCTaGTCTGTGGCCCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISSLQSS*SVAHLS
Trigger: AGACAAGTGGGCCACAGACCAGGAAGACTGCAGTGA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAAATTCACTCTCTCTGTaGCTTGAGTCCTCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPNSLSL*LESSPR
Trigger: ACGGGGAGAGGACTCAAGCCACAGAGAGAGTGAATT...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACTTTTCCCTGGGTTTTaGCCTCGTTGGTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPLFPGF*PRWCHD
Trigger: ATCATGGCACCAACGAGGCCAAAACCCAGGGAAAAG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCATCTGTAGCTTTTCCCTaGGTTTTGGCCTCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPSVAFP*VLASLV
Trigger: CACCAACGAGGCCAAAACCCAGGGAAAAGCTACAGA...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCAGGCCACATACTGGCTaGACGTTCTTCTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISRPHTG*TFFSEA
Trigger: AGCCTCAGAGAAGAACGTCCAGCCAGTATGTGGCCT...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAATCAGCATGGACTTTTaGGGCTCCTATGCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSISMDF*GSYALG
Trigger: GCCAAGCGCATAGGAGCCCCAAAAGTCCATGCTGAT...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCGCTGAGCTGGCCTCCTaGCTACTTGTGCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISAELAS*LLVLCF
Trigger: AAAGCAAAGCACAAGTAGCCAGGAGGCCAGCTCAGC...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAGCTGAGCTGGCCTCCTaGCTACTTGTGCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSAELAS*LLVLCF
Trigger: AAAGCAAAGCACAAGTAGCCAGGAGGCCAGCTCAGC...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTTTGGGACTGGTCTCTaGACAACAGGTTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFFGTGL*TTGLNF
Trigger: AAAATTCAAACCTGTTGTCCAGAGACCAGTCCCAAA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCACAAAACACATTTCCTTaGCACACGAGCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSQNTFP*HTSCAA
Trigger: CGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTTTG...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CTTGATGTTCCTGGCTATGCAGACTCCTTGAGTGACGCCTGTGGGCATATTACAATTAAGTGTGAGTGCTaGGCTCCAGCATTTATAGTC +
Preference number: 4 (lower is better)
Translates to: LDVPGYADSLSDACGHITIKCEC*APAFIV
Trigger: GACTATAAATGCTGGAGCCCAGCACTCACACTTAAT...TGTAATATGCCCACAGGCGTCACTCAAGGAGTCTGCATAGCCAGGAACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp GGGAGTTGCTGTTCAGTGAGTAGAGTATCAGATTTGCAGGACGATGAGGTCCTGTTCCTCTCTATTAGCTaGGAGAAACCAGGGACAATA +
Preference number: 4 (lower is better)
Translates to: GSCCSVSRVSDLQDDEVLFLSIS*EKPGTI
Trigger: TATTGTCCCTGGTTTCTCCCAGCTAATAGAGAGGAA...CAGGACCTCATCGTCCTGCAAATCTGATACTCTACTCACTGAACAGCAACTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395540.6
CDS-3UTR CCA 90 bp AAGGAAGTAAATTCTGGGTATACAATGAGCCCTTTTATCCTGAAAGGAGGAAGAGGGCAGAAGAGACACTaGGAAAGGTCCGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KEVNSGYTMSPFILKGGRGQKRH*ERSEVR
Trigger: CCTGACCTCGGACCTTTCCCAGTGTCTCTTCTGCCC...TCTTCCTCCTTTCAGGATAAAAGGGCTCATTGTATACCCAGAATTTACTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR CCA 90 bp TTTTATAAATCACAGCATGCTCAATTGTCCACTGGCAACATGGTCTCCAGGGTGTGCTCAATTGTCCACTaGCAACATGGTCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FYKSQHAQLSTGNMVSRVCSIVH*QHGLQG
Trigger: ACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCA...CACCCTGGAGACCATGTTGCCAGTGGACAATTGAGCATGCTGTGATTTATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR TCA 90 bp ACAGGAACATTTCCAAGTATCAGTGAATTTCAGACAGGTGAATATTATCAACCTTCACTTTTTCCGCGCTaGCCCATCGTCCTCCCACGC +
Preference number: 4 (lower is better)
Translates to: TGTFPSISEFQTGEYYQPSLFPR*PIVLPR
Trigger: GCGTGGGAGGACGATGGGTCAGCGCGGAAAAAGTGA...AGGTTGATAATATTCACCTGTCTGAAATTCACTGATACTTGGAAATGTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR TCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACCTGAAACTTCCCCTATaGATGTTACTGGGATTGCAT +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDLKLPL*MLLGLH
Trigger: ATGCAATCCCAGTAACATTCATAGGGGAAGTTTCAG...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCTTTAGGTTGTCTGTGTaGAGATTCGAAGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFFRLSV*RFEAKE
Trigger: TTCTTTTGCTTCGAATCTTCACACAGACAACCTAAA...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACTGGACGTTCTTCTCTaGGGCTTGAGAAATGTGACT +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPLDVLL*GLRNVT
Trigger: AGTCACATTTCTCAAGCCTCAGAGAAGAACGTCCAG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCAGCGCAACTTTGATCTaGACTCTTGACAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISSATLI*TLDRWA
Trigger: TGCCCACCTGTCAAGAGTTCAGATCAAAGTTGCGCT...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCACAAACGCGTCAAGGCTaGACCAAAATTGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPQTRQG*TKIVML
Trigger: GAGCATCACAATTTTGGTTCAGCCTTGACGCGTTTG...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR TCA 90 bp AAGGAAGTAAATTCTGGGTATACAATGAGCCCTTTTATCCTGAAAGGAGGAAGACTGGGTGAGGTTGTGTaGCTGCAGAGGGATCTCACA +
Preference number: 4 (lower is better)
Translates to: KEVNSGYTMSPFILKGGRLGEVV*LQRDLT
Trigger: TGTGAGATCCCTCTGCAGTCACACAACCTCACCCAG...TCTTCCTCCTTTCAGGATAAAAGGGCTCATTGTATACCCAGAATTTACTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR GCA 90 bp TTTAGGCACTTAGTTTTACCAGGTAGACAGAAAGTTTCAGTTCTATCCAAATTGATGCGAACCAAGTTCTaGTGCGACCCGAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FRHLVLPGRQKVSVLSKLMRTKF*CDPRAP
Trigger: TGGGGCCCTCGGGTCGCAGCAGAACTTGGTTCGCAT...CAATTTGGATAGAACTGAAACTTTCTGTCTACCTGGTAAAACTAAGTGCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR GCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTATTTCATGCTGTCCTaGTGCGAGTCCAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPYFMLS*CESRET
Trigger: CGTCTCTCTGGACTCGCAGCAGGACAGCATGAAATA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACGTCTTCATCAAGTTCTaGAAGGGTTTTACGGAACTC +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDVFIKF*KGFTEL
Trigger: GAGTTCCGTAAAACCCTTGCAGAACTTGATGAAGAC...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp ACACACCGAAAATCAACTGTGCGCATTTGGCCTGTAGACAAGAAAGTAACACCAAATGGGCTGAGATTCTaGTTCAGGCACAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: THRKSTVRIWPVDKKVTPNGLRF*FRHRRR
Trigger: TCTTCGTCTGTGCCTGAAGCAGAATCTCAGCCCATT...TGGTGTTACTTTCTTGTCTACAGGCCAAATGCGCACAGTTGATTTTCGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCTGGCTACTTGTGCTTTaGTTTCCACTGAAACCACAG +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRWLLVL*FPLKPQ
Trigger: CTGTGGTTTCAGTGGAAAGCAAAGCACAAGTAGCCA...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp CATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCCTTTCATAGTCCCATTAACCTaGCAACAAGAATCGTTTATT +
Preference number: 4 (lower is better)
Translates to: HFLGTRAAQRHSIFSFPFIVPLT*QQESFI
Trigger: AATAAACGATTCTTGTTGGCAGGTTAATGGGACTAT...GAAAGGAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp AAACACATTTCCTTGGCACACGAGCTGCGCAGCGACACAGCATCTTCTCCTTTCATAATTAAGTGTGAGTaGTGGGCTCCAGCATTTATA +
Preference number: 4 (lower is better)
Translates to: KHISLAHELRSDTASSPFIIKCE*WAPAFI
Trigger: TATAAATGCTGGAGCCCAGCACTCACACTTAATTAT...GAAAGGAGAAGATGCTGTGTCGCTGCGCAGCTCGTGTGCCAAGGAAATGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCTTGGCTGGTAGCTCGTaGCTCACCAAGAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISLAGSS*LTKSLA
Trigger: TGCTAAACTCTTGGTGAGGCACGAGCTACCAGCCAA...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR GCA 90 bp GATCAAGTAAATTGGGGGTGCCATGTTCAAATTATATTCACCCCCTGTAAGCTGCCAAGGGATTCTTCATaGTCTCAACTTGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: DQVNWGCHVQIIFTPCKLPRDSS*SQLACT
Trigger: CGTGCAGGCAAGTTGAGAGCATGAAGAATCCCTTGG...CAGCTTACAGGGGGTGAATATAATTTGAACATGGCACCCCCAATTTACTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441453.5
CDS-3UTR CCA 90 bp AAGGAAGTAAATTCTGGGTATACAATGAGCCCTTTTATCCTGAAAGGAGGAAGAAGGTCCATCATCGCATaGCTCCCATTGAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: KEVNSGYTMSPFILKGGRRSIIA*LPLSTL
Trigger: GAGCGTGCTCAATGGGAGCCATGCGATGATGGACCT...TCTTCCTCCTTTCAGGATAAAAGGGCTCATTGTATACCCAGAATTTACTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441453.5
ENST00000632460.1
CDS-3UTR CCA 90 bp TCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAACTGTGCGCAGTCTTCCTGGTCTGTaGCCCACTTGTCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SPFLSSRYTGTHRKSTVRSLPGL*PTCLCI
Trigger: AATACAAAGACAAGTGGGCCACAGACCAGGAAGACT...GCGCACAGTTGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCAAATTCACTCTCTCTGTaGCTTGAGTCCTCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSNSLSL*LESSPR
Trigger: ACGGGGAGAGGACTCAAGCCACAGAGAGAGTGAATT...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp CACCATGTGAGAAGACCACGATATCATACAAAGGGAGCCAATGAGCTGTTGGACTTTTCATTCACCGGTTaGGAATTCACTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HHVRRPRYHTKGANELLDFSFTG*EFTLSV
Trigger: CACAGAGAGAGTGAATTCCCAACCGGTGAATGAAAA...GTCCAACAGCTCATTGGCTCCCTTTGTATGATATCGTGGTCTTCTCACATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp ACAGCATCTTCTCCTTTCCTTTCAAGCCGTTATACAGGAACACACCGAAAATCATCTGTAGCTTTTCCCTaGGTTTTGGCCTCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TASSPFLSSRYTGTHRKSSVAFP*VLASLV
Trigger: CACCAACGAGGCCAAAACCCAGGGAAAAGCTACAGA...TGATTTTCGGTGTGTTCCTGTATAACGGCTTGAAAGGAAAGGAGAAGATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCATTTATAGTCCCATTAACCTGCCAACAAGAATCGTTTATTAGCAAACAGGAGCTTCTGTaGATAGCAGCAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: WAPAFIVPLTCQQESFISKQELL*IAAGLS
Trigger: GGACAGACCTGCTGCTATCCACAGAAGCTCCTGTTT...GCTAATAAACGATTCTTGTTGGCAGGTTAATGGGACTATAAATGCTGGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265136.12
ENST00000395542.6
ENST00000431948.5
ENST00000445054.5
CDS-3UTR CCA 90 bp AAGAAGAATCCAGCAGTTTTACTACCTAACAAAGCCACCTTTGAAAAGCCTCCCTCGGCCCAAAAATGCTaGGTGGCCAAATACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KKNPAVLLPNKATFEKPPSAQKC*VAKYCL
Trigger: CAGACAGTATTTGGCCACCCAGCATTTTTGGGCCGA...GGGAGGCTTTTCAAAGGTGGCTTTGTTAGGTAGTAAAACTGCTGGATTCTTCTT
4