Pregenerated sensors for COA5 (Homo sapiens)
Ensembl gene IDs: ENSG00000183513Ensembl transcript IDs: ENST00000328709.8, ENST00000409997.1, ENST00000480666.1, ENST00000483527.5
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAACAGTCCGAAGATGATGGTAAAGAGCCTGGGCAACACAATCTaGGGCCTAGCATCAGCTATGCCTGTGGACGCTATTAAAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: KNSPKMMVKSLGNTI*GLASAMPVDAIKVL Trigger: CAGCACTTTAATAGCGTCCACAGGCATAGCTGATGCTAGGCCCCAGATTGTGTTGCCCAGGCTCTTTACCATCATCTTCGGACTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTGGTCCAATGCAAGGGCCCAACAGACACCTTCTaGATAGGCTGCATGTTATCG | + |
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Preference number: 2 (lower is better) Translates to: QDHRPPSPLPQGLVQCKGPTDTF*IGCMLS Trigger: CGATAACATGCAGCCTATCCAGAAGGTGTCTGTTGG...GCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTGGTCCAATGCAAGGGCACCTTCTGGATAGGCTaGATGTTATCGACTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: QDHRPPSPLPQGLVQCKGTFWIG*MLSTVS Trigger: TGACACAGTCGATAACATGCAGCCTATCCAGAAGGT...GCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTGGTCCAATGCAAGGGCCTCCCTTTTGAATCATaGATAATAAGGATGTGGACT | + |
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Preference number: 2 (lower is better) Translates to: QDHRPPSPLPQGLVQCKGLPFES*IIRMWT Trigger: AGTCCACATCCTTATTATCCATGATTCAAAAGGGAG...GCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR CCA 72 bp | AAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTaGTCCAATGCAAGGGCAGGTGATCCTGGGAAGACC | + |
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Preference number: 3 (lower is better) Translates to: KITGPHPLFHRD*SNARAGDPGKT Trigger: GGTCTTCCCAGGATCACCTGCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR CCA 72 bp | CCGAAGATGATGGTAAAGAGCCTGGGCAACACAATCTaGGGCCTAGCATCAGCTATGCCTGTGGACGCTATT | + |
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Preference number: 3 (lower is better) Translates to: PKMMVKSLGNTI*GLASAMPVDAI Trigger: AATAGCGTCCACAGGCATAGCTGATGCTAGGCCCCAGATTGTGTTGCCCAGGCTCTTTACCATCATCTTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR TCA 72 bp | CCTCTTCCACAGGGACTGGTCCAATGCAAGGGCAGGTaGTCCTGGGAAGACCAGAGTCCTTTTATAGATTTG | + |
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Preference number: 3 (lower is better) Translates to: PLPQGLVQCKGR*SWEDQSPFIDL Trigger: CAAATCTATAAAAGGACTCTGGTCTTCCCAGGATCACCTGCCCTTGCATTGGACCAGTCCCTGTGGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAAACAAAAACAGTCCGAAGATGATGGTAAAGAGCCTGGGCAACACAATCGACCAGGGAAAATATTaGTTGTTTTCCATGTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: PGNKNSPKMMVKSLGNTIDQGKY*LFSMLA Trigger: AGCCAACATGGAAAACAACAAATATTTTCCCTGGTC...GATTGTGTTGCCCAGGCTCTTTACCATCATCTTCGGACTGTTTTTGTTTCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR CCA 72 bp | CTGGGAAGACCAGAGTCCTTTTATAGATTTGATTTGTaGACCCTGAAAAAGGAAGTTCTCTCTCTCCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LGRPESFYRFDL*TLKKEVLSLPF Trigger: AAAAGGGAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGACTCTGGTCTTCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR GCA 90 bp | CAAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTGGTCCAATGCAAGGGCTCCCACCGCAACACTTaGAACCGGGTCGGGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: QDHRPPSPLPQGLVQCKGSHRNT*NRVGSE Trigger: CTCGCTCCCGACCCGGTTGCAAGTGTTGCGGTGGGA...GCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR CCA 90 bp | AAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTGGTCCAATGCAAGGGCACTCTTCCACAGGGACTaGTCCAATGCAAGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KITGPHPLFHRDWSNARALFHRD*SNARAG Trigger: ACCTGCCCTTGCATTGGACCAGTCCCTGTGGAAGAG...TGCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR TCA 90 bp | CAAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTGGTCCAATGCAAGGGCTTGTCCCTTTCCTGGTaGAAAGGAGTATACACAACA | + |
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Preference number: 4 (lower is better) Translates to: QDHRPPSPLPQGLVQCKGLSLSW*KGVYTT Trigger: TGTTGTGTATACTCCTTTTCACCAGGAAAGGGACAA...GCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR CCA 90 bp | AAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTGGTCCAATGCAAGGGCACTCCCTTTTGAATCATaGATAATAAGGATGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: KITGPHPLFHRDWSNARALPFES*IIRMWT Trigger: AGTCCACATCCTTATTATCCATGATTCAAAAGGGAG...TGCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTTATAGATTTGATTTGTGGACCCTGAAAAAGGAAGTTCTCTCTCTCCCTGCGCTTCCCCTCCGATaGGGACGCGACTTTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SFYRFDLWTLKKEVLSLPALPLR*GRDFLP Trigger: TGGGAGAAAGTCGCGTCCGCATCGGAGGGGAAGCGC...AGGGAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR GCA 90 bp | GAGTCCTTTTATAGATTTGATTTGTGGACCCTGAAAAAGGAAGTTCTCTCTCTCACCACACAGTCCGACTaGAGCAGACACGCGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESFYRFDLWTLKKEVLSLTTQSD*SRHAPR Trigger: CCTGGGCGCGTGTCTGCTGCAGTCGGACTGTGTGGT...GAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAAACAAAAACAGTCCGAAGATGATGGTAAAGAGCCTGGGCAACACAATCACCTTCTGGATAGGCTaGATGTTATCGACTGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PGNKNSPKMMVKSLGNTITFWIG*MLSTVS Trigger: TGACACAGTCGATAACATGCAGCCTATCCAGAAGGT...GATTGTGTTGCCCAGGCTCTTTACCATCATCTTCGGACTGTTTTTGTTTCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTTATAGATTTGATTTGTGGACCCTGAAAAAGGAAGTTCTCTCTCTCCCTGGTGATTTTCCTTCCTaGACCACACAGTCCGACTGC | + |
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Preference number: 4 (lower is better) Translates to: SFYRFDLWTLKKEVLSLPGDFPS*TTQSDC Trigger: GCAGTCGGACTGTGTGGTCCAGGAAGGAAAATCACC...AGGGAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| 3UTR CAA 72 bp | ATCCTGGGAAGACCAGAGTCCTTTTATAGATTTGATTaGTGGACCCTGAAAAAGGAAGTTCTCTCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ILGRPESFYRFD*WTLKKEVLSLP Trigger: AGGGAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGACTCTGGTCTTCCCAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTTATAGATTTGATTTGTGGACCCTGAAAAAGGAAGTTCTCTCTCTCCCTGTACAACGCCCCGATTaGTTTAACTCCAGTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: SFYRFDLWTLKKEVLSLPVQRPD*FNSSEP Trigger: TGGTTCACTGGAGTTAAAGCAATCGGGGCGTTGTAC...AGGGAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR CCA 90 bp | GAGTCCTTTTATAGATTTGATTTGTGGACCCTGAAAAAGGAAGTTCTCTCTCTCCCAACAGACACCTTCTaGATAGGCTGCATGTTATCG | + |
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Preference number: 4 (lower is better) Translates to: ESFYRFDLWTLKKEVLSLPTDTF*IGCMLS Trigger: CGATAACATGCAGCCTATCCAGAAGGTGTCTGTTGG...GAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTTATAGATTTGATTTGTGGACCCTGAAAAAGGAAGTTCTCTCTCTCCCTTTGATTTGTGGACCCTaGAAAAGGAAGTTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SFYRFDLWTLKKEVLSLPLICGP*KRKFSL Trigger: GAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAA...AGGGAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTTATAGATTTGATTTGTGGACCCTGAAAAAGGAAGTTCTCTCTCTCCCTTCTCTCTCTCCCTTTTaGATCATGGATAATAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SFYRFDLWTLKKEVLSLPSLSPF*IMDNKD Trigger: ATCCTTATTATCCATGATTCAAAAGGGAGAGAGAGA...AGGGAGAGAGAGAACTTCCTTTTTCAGGGTCCACAAATCAAATCTATAAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR CAA 90 bp | CCAGGAAACAAAAACAGTCCGAAGATGATGGTAAAGAGCCTGGGCAACACAATCCTCCCACCGCAACACTaGCAACCGGGTCGGGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: PGNKNSPKMMVKSLGNTILPPQH*QPGRER Trigger: TCGCTCCCGACCCGGTTGCAAGTGTTGCGGTGGGAG...GATTGTGTTGCCCAGGCTCTTTACCATCATCTTCGGACTGTTTTTGTTTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS-3UTR CAA 90 bp | AAGATCACAGGCCCCCATCCCCTCTTCCACAGGGACTGGTCCAATGCAAGGGCAGACCAGGGAAAATATTaGTTGTTTTCCATGTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: KITGPHPLFHRDWSNARADQGKY*LFSMLA Trigger: AGCCAACATGGAAAACAACAAATATTTTCCCTGGTC...TGCCCTTGCATTGGACCAGTCCCTGTGGAAGAGGGGATGGGGGCCTGTGATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000328709.8 |
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| CDS GCA 72 bp | TCCGATGCGGACGCGACTTTCTCCCACCGCAACACTTaGAACCGGGTCGGGAGCGAGCGAGGCCCCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SDADATFSHRNT*NRVGSERGPSL Trigger: GAGACTGGGGCCTCGCTCGCTCCCGACCCGGTTGCAAGTGTTGCGGTGGGAGAAAGTCGCGTCCGCATCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000328709.8 ENST00000409997.1 ENST00000483527.5 |
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| CDS CAA 72 bp | GCCGCATCACTGCAGCCACTCCCCAGAACCTTTATGTaGCAAGTGCCAGGCACGCTCTGCCAGTTTTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: AASLQPLPRTFM*QVPGTLCQFFL Trigger: TAGGAAAAACTGGCAGAGCGTGCCTGGCACTTGCAACATAAAGGTTCTGGGGAGTGGCTGCAGTGATGCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480666.1 |
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| CDS GCA 72 bp | TCCCTCAAGCAGATTTTGACTCTACAGCCGCATCACTaGAGCCACTCCCCAGAACCTTTATGTTGCAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: SLKQILTLQPHH*SHSPEPLCCKC Trigger: GCACTTGCAACATAAAGGTTCTGGGGAGTGGCTGCAGTGATGCGGCTGTAGAGTCAAAATCTGCTTGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480666.1 |
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| CDS CAA 72 bp | GCTCTGCATAATCAGGGATTTTCCCTCAAGCAGATTTaGACTCTACAGCCGCATCACTGCAGCCACTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: ALHNQGFSLKQI*TLQPHHCSHSP Trigger: TGGGGAGTGGCTGCAGTGATGCGGCTGTAGAGTCAAAATCTGCTTGAGGGAAAATCCCTGATTATGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480666.1 |
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| CDS CAA 90 bp | AGCTCATCTGCTCTGCATAATCAGGGATTTTCCCTCAAGCAGATTTaGACTCTACAGCCGCATCACTGCAGCCACTCCCCAGAACCTTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSALHNQGFSLKQI*TLQPHHCSHSPEPL Trigger: TAAAGGTTCTGGGGAGTGGCTGCAGTGATGCGGCTGTAGAGTCAAAATCTGCTTGAGGGAAAATCCCTGATTATGCAGAGCAGATGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480666.1 |
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