Pregenerated sensors for COA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000183978Ensembl transcript IDs: ENST00000328434.8, ENST00000586680.1
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTaGCTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGCAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: VALQRESRSLLGVSK*LHPRNRLSLFPCSQ Trigger: TTGGCTGCAAGGGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR TCA 90 bp | GAAGCCAGGCTGGCGCCCATCTCTGAAGGTAAGGCCTCTGACCACTaGCCTTCCCCTGCCATTATCCCTACTCACTGTCTGTCCTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: EARLAPISEGKASDH*PSPAIIPTHCLSCH Trigger: GTGACAGGACAGACAGTGAGTAGGGATAATGGCAGGGGAAGGTCAGTGGTCAGAGGCCTTACCTTCAGAGATGGGCGCCAGCCTGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR GCA 90 bp | AACCTGGGAGAGCAAGGTGTGTGGCTAGCCCTTTCATGCCCTCCGTaGATCCTCAGGCACTTGTCAGAGGTGGAAACACTACAGACACTG | + |
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Preference number: 1 (lower is better) Translates to: NLGEQGVWLALSCPP*ILRHLSEVETLQTL Trigger: CAGTGTCTGTAGTGTTTCCACCTCTGACAAGTGCCTGAGGATGCACGGAGGGCATGAAAGGGCTAGCCACACACCTTGCTCTCCCAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR GCA 90 bp | CAAGTGTGCAGTGGGCAAAGTTCTGTTCTTTTGACATTGGCCAAATaGGTAAGTCCCTGGTTTCTTGGGCTCAATCACGGTCCAAGGTTA | + |
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Preference number: 1 (lower is better) Translates to: QVCSGQSSVLLTLAK*VSPWFLGLNHGPRL Trigger: TAACCTTGGACCGTGATTGAGCCCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGCCCACTGCACACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGACTACAGACACTGGCTaGAGCTTCGCCTTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GGGPETREALAESDRAAETTDTG*SFAFLP Trigger: TGGGAGGAAGGCGAAGCTGCAGCCAGTGTCTGTAGT...CTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGAGTGAGAGGAGAACCTaGGAGAGCAAGGTGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: GGGPETREALAESDRAAESERRT*ESKVCG Trigger: GCCACACACCTTGCTCTCCCAGGTTCTCCTCTCACT...CTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCGGCACTTGTCAGAGGTaGAAACACTACAGACACTGG | + |
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Preference number: 2 (lower is better) Translates to: AGQRPGKLWLRATVQLRVGTCQR*KHYRHW Trigger: CCAGTGTCTGTAGTGTTTCCACCTCTGACAAGTGCC...GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR CAA 90 bp | GGTGTGTGGCTAGCCCTTTCATGCCCTCCGTGCATCCTCAGGCACTaGTCAGAGGTGGAAACACTACAGACACTGGCTGCAGCTTCGCCT | + |
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Preference number: 2 (lower is better) Translates to: GVWLALSCPPCILRH*SEVETLQTLAAASP Trigger: AGGCGAAGCTGCAGCCAGTGTCTGTAGTGTTTCCACCTCTGACAAGTGCCTGAGGATGCACGGAGGGCATGAAAGGGCTAGCCACACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR GCA 90 bp | GTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGTGGCTAGCCCTTTCATaGCCTCCGTGCATCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VGRFQVTSSKEPAEPLPLWLALS*PPCILR Trigger: CCTGAGGATGCACGGAGGGCATGAAAGGGCTAGCCA...CAAGGGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTGGAAACGCCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | CCTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCAAACACTACAGACACTaGCTGCAGCTTCGCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PHAFFLVALQRESRSLLGKHYRH*LQLRLP Trigger: AGGAAGGCGAAGCTGCAGCCAGTGTCTGTAGTGTTT...GCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | CCTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCATCCCCCACTCTCTCTaGTTCTCCAAAACCTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: PHAFFLVALQRESRSLLGIPHSL*FSKTFN Trigger: GTTGAAGGTTTTGGAGAACCAGAGAGAGTGGGGGAT...GCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | ACCCCTGAGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGGCCTTCCTCCCACCTTaGAGGTTTCTTCATCACTTT | + |
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Preference number: 2 (lower is better) Translates to: TPEPSQPSVDELLLQQPVAFLPP*RFLHHF Trigger: AAAGTGATGAAGAAACCTCCAAGGTGGGAGGAAGGC...CACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCTCAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGGAAGATGAGGAGTTCTaGGCTGAGCTGCAGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: VGRFQVTSSKEPAEPLPLEDEEF*AELQSL Trigger: AAGACTCTGCAGCTCAGCCCAGAACTCCTCATCTTC...CAAGGGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTGGAAACGCCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGAAGGTAAGGCCTCTGACCACTGACCTTCCCCTGCCATTATCCCTACTCAAAGCCGCAGCTTGTTaGGCGTTTCCAAGTGACTTC | + |
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Preference number: 2 (lower is better) Translates to: SLKVRPLTTDLPLPLSLLKAAAC*AFPSDF Trigger: GAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTT...GAGTAGGGATAATGGCAGGGGAAGGTCAGTGGTCAGAGGCCTTACCTTCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCTGCACTCTTCCCTTCAAGGCCTCTGACCACTaGCCTTCCCCTGCCATTATC | + |
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Preference number: 2 (lower is better) Translates to: SRKPRGMIRETPLCTLPFKASDH*PSPAII Trigger: GATAATGGCAGGGGAAGGTCAGTGGTCAGAGGCCTT...GAAGGGAAGAGTGCAGAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR TCA 90 bp | AGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCTTCTTTTCCCTCCAGTaGATTCAGAACAGAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: SHPSPVWMNYSYSSLCLSFFSLQ*IQNRSH Trigger: ATGGCTTCTGTTCTGAATTCACTGGAGGGAAAAGAA...GCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCTGCACTCTTCCCTTCTTGGGCGTTTCCAAGTaGCTTCATCCAAGGAACCGG | + |
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Preference number: 2 (lower is better) Translates to: SRKPRGMIRETPLCTLPFLGVSK*LHPRNR Trigger: CCGGTTCCTTGGATGAAGTCACTTGGAAACGCCCAA...GAAGGGAAGAGTGCAGAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCAAAACCTTCAACCCCTCAGCTCACTTCAGAGAGCTCAGATACAGAGGACTTTCATGCCCTCCGTaGATCCTCAGGCACTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: FSKTFNPSAHFRELRYRGLSCPP*ILRHLS Trigger: TGACAAGTGCCTGAGGATGCACGGAGGGCATGAAAG...TCCTCTGTATCTGAGCTCTCTGAAGTGAGCTGAGGGGTTGAAGGTTTTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCAAAACCTTCAACCCCTCAGCTCACTTCAGAGAGCTCAGATACAGAGGAAGTTCTGGGCTGAGCTaGAGAGTCTTCGGCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: FSKTFNPSAHFRELRYRGSSGLS*RVFGRS Trigger: ACTTCTGCCGAAGACTCTGCAGCTCAGCCCAGAACT...TCCTCTGTATCTGAGCTCTCTGAAGTGAGCTGAGGGGTTGAAGGTTTTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCAAAACCTTCAACCCCTCAGCTCACTTCAGAGAGCTCAGATACAGAGGACACCAGGGCCCACCATaGAGCTTGTGTTCTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: FSKTFNPSAHFRELRYRGHQGPP*SLCSQN Trigger: ATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTG...TCCTCTGTATCTGAGCTCTCTGAAGTGAGCTGAGGGGTTGAAGGTTTTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACAAGTCCCTGGTTTCTTaGGCTCAATCACGGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SETLGKATVACTPLKQGNKSLVS*AQSRSK Trigger: CTTGGACCGTGATTGAGCCCAAGAAACCAGGGACTT...GTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| 3UTR CAA 90 bp | TGTACACAGCAAGTGTGCAGTGGGCAAAGTTCTGTTCTTTTGACATaGGCCAAATGCGTAAGTCCCTGGTTTCTTGGGCTCAATCACGGT | + |
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Preference number: 2 (lower is better) Translates to: CTQQVCSGQSSVLLT*AKCVSPWFLGLNHG Trigger: ACCGTGATTGAGCCCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGCCCACTGCACACTTGCTGTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| 3UTR CAA 90 bp | TGGAAACACTACAGACACTGGCTGCAGCTTCGCCTTCCTCCCACCTaGGAGGTTTCTTCATCACTTTTTCTTTTCCCTCCAGTGAATTCA | + |
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Preference number: 2 (lower is better) Translates to: WKHYRHWLQLRLPPT*EVSSSLFLFPPVNS Trigger: TGAATTCACTGGAGGGAAAAGAAAAAGTGATGAAGAAACCTCCAAGGTGGGAGGAAGGCGAAGCTGCAGCCAGTGTCTGTAGTGTTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACTGTACACAGCAAGTGTaGAGTGGGCAAAGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: SETLGKATVACTPLKQGNCTQQV*SGQSSV Trigger: AACAGAACTTTGCCCACTGCACACTTGCTGTGTACA...GTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| 3UTR-3UTR GCA 90 bp | TATTCTCAATTTGACCCTATGTATCCCACTGTAGGCTCAAACACTGCACAGAGCAAAGCCACGGTCGCATaGACACCTCTCAAACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YSQFDPMYPTVGSNTAQSKATVA*TPLKQG Trigger: TCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTT...GCTCTGTGCAGTGTTTGAGCCTACAGTGGGATACATAGGGTCAAATTGAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACAAATGCGTAAGTCCCTaGTTTCTTGGGCTCAATCAC | + |
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Preference number: 2 (lower is better) Translates to: SETLGKATVACTPLKQGNKCVSP*FLGLNH Trigger: GTGATTGAGCCCAAGAAACCAGGGACTTACGCATTT...GTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGTTCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGAGGCCAACAATGTTGTaGGCAGGATTCAATTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: AKFCSFDIGQMRKSLVSWRPTML*AGFNFY Trigger: GTAGAAATTGAATCCTGCTCACAACATTGTTGGCCT...CCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| 3UTR GCA 72 bp | AACCTGGGAGAGCAAGGTGTGTGGCTAGCCCTTTCATaGCCTCCGTGCATCCTCAGGCACTTGTCAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: NLGEQGVWLALS*PPCILRHLSEV Trigger: CACCTCTGACAAGTGCCTGAGGATGCACGGAGGGCATGAAAGGGCTAGCCACACACCTTGCTCTCCCAGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR CCA 72 bp | TCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTaGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGC | + |
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Preference number: 3 (lower is better) Translates to: SSSPYRGKAAAC*AFPSDFIQGTG Trigger: GCCGGTTCCTTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR TCA 72 bp | CAGAGGGAAAGCCGCAGCTTGTTGGGCGTTTCCAAGTaGCTTCATCCAAGGAACCGGCTGAGCCTCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: QRESRSLLGVSK*LHPRNRLSLFP Trigger: AGGGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTTCCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR CCA 72 bp | CATGCCCTCCGTGCATCCTCAGGCACTTGTCAGAGGTaGAAACACTACAGACACTGGCTGCAGCTTCGCCTT | + |
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Preference number: 3 (lower is better) Translates to: HALRASSGTCQR*KHYRHWLQLRL Trigger: AAGGCGAAGCTGCAGCCAGTGTCTGTAGTGTTTCCACCTCTGACAAGTGCCTGAGGATGCACGGAGGGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR GCA 72 bp | GAGCAAGGTGTGTGGCTAGCCCTTTCATGCCCTCCGTaGATCCTCAGGCACTTGTCAGAGGTGGAAACACTA | + |
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Preference number: 3 (lower is better) Translates to: EQGVWLALSCPP*ILRHLSEVETL Trigger: TAGTGTTTCCACCTCTGACAAGTGCCTGAGGATGCACGGAGGGCATGAAAGGGCTAGCCACACACCTTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CAA 90 bp | AGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCGGCCCACCATGGAGCTaGTGTTCTCAGAATCTGATG | + |
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Preference number: 3 (lower is better) Translates to: SHPSPVWMNYSYSSLCLSGPPWS*CSQNLM Trigger: CATCAGATTCTGAGAACACAAGCTCCATGGTGGGCC...GCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR-3UTR CAA 90 bp | GTGGAGAGTGAGGTGAGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCCGCCTTCCTCCCACCTaGGAGGTTTCTTCATCACTT | + |
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Preference number: 3 (lower is better) Translates to: VESEVSRKPRGMIRETPLRLPPT*EVSSSL Trigger: AAGTGATGAAGAAACCTCCAAGGTGGGAGGAAGGCG...GAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACTCACCTCACTCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR CCA 72 bp | TCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTaGTTTCTTGGGCTCAATCACGGTCCAAGGTTAGTA | + |
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Preference number: 3 (lower is better) Translates to: SVLLTLAKCVSP*FLGLNHGPRLV Trigger: TACTAACCTTGGACCGTGATTGAGCCCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR TCA 90 bp | GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCGTCGGGTCGATACGCTaGGCGAACGGGGCCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AGQRPGKLWLRATVQLRVVGSIR*ANGASP Trigger: TGGAGAGGCCCCGTTCGCTCAGCGTATCGACCCGAC...GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCCAGGGGAAGCCAGGCTaGCGCCCATCTCTGAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: AGQRPGKLWLRATVQLRVQGKPG*RPSLKV Trigger: TACCTTCAGAGATGGGCGCCAGCCTGGCTTCCCCTG...GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | CCTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCCGTGGTAGGACCTTCTaGCACTGGGCAAGCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PHAFFLVALQRESRSLLGRGRTF*HWASSA Trigger: GGCGGAGCTTGCCCAGTGGCAGAAGGTCCTACCACG...GCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | CCTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCACACCAGGGCCCCGATaGCTAGGCCGGTCACGATGT | + |
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Preference number: 4 (lower is better) Translates to: PHAFFLVALQRESRSLLGTPGPR*LGRSRC Trigger: ACATCGTGACCGGCCTAGGCATCGGGGCCCTGGTGT...GCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | CTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCGCCTTCCCCCTCCCGTTaGTCCTGGTGGCCAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LMPSSSSPYRGKAAACWAPSPSR*SWWPGK Trigger: CTTTCCTGGCCACCAGGAGCAACGGGAGGGGGAAGG...CGCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGCATCCCAGCCCAGTGTaGATGAACTACTCCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: GGGPETREALAESDRAAEHPSPV*MNYSYS Trigger: GCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATG...CTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | CTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCGCCCTCCCGTTGCTCCTaGTGGCCAGGAAAGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LMPSSSSPYRGKAAACWAPSRCS*WPGKPF Trigger: GAAGGGCTTTCCTGGCCACCAGGAGCAACGGGAGGG...CGCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | CCTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCTGGGCAAGCTCCGCCTaGCGCATGGAATGCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PHAFFLVALQRESRSLLGWASSA*RMECSC Trigger: GCAACTGCATTCCATGCGGCAGGCGGAGCTTGCCCA...GCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGCACTTGTCAGAGGTaGAAACACTACAGACACTGG | + |
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Preference number: 4 (lower is better) Translates to: GGGPETREALAESDRAAEGTCQR*KHYRHW Trigger: CCAGTGTCTGTAGTGTTTCCACCTCTGACAAGTGCC...CTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGAAGATGAGGAGTTCTaGGCTGAGCTGCAGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GGGPETREALAESDRAAEEDEEF*AELQSL Trigger: AAGACTCTGCAGCTCAGCCCAGAACTCCTCATCTTC...CTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | CCTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCAGACCAGGGAAGCTCTaGCTGAGAGCGACCGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PHAFFLVALQRESRSLLGRPGKL*LRATVQ Trigger: CTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCT...GCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | AAGCCAGGCTGGCGCCCATCTCTGAAGGTAAGGCCTCTGACCACTGACCTTCCCAGATACAGAGGACAGTaGTGGAGGCGGGCCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: KPGWRPSLKVRPLTTDLPRYRGQ*WRRARD Trigger: GTCTCTGGCCCGCCTCCAGCACTGTCCTCTGTATCT...GGGAAGGTCAGTGGTCAGAGGCCTTACCTTCAGAGATGGGCGCCAGCCTGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | AGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCAGGACCTTCTGCCACTaGGCAAGCTCCGCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SHPSPVWMNYSYSSLCLSRTFCH*ASSACR Trigger: GCGGCAGGCGGAGCTTGCCCAGTGGCAGAAGGTCCT...GCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | GTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGGCTCCGCCTGCCGCATaGAATGCAGTTGCTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGRFQVTSSKEPAEPLPLAPPAA*NAVARV Trigger: CACCCGAGCAACTGCATTCCATGCGGCAGGCGGAGC...CAAGGGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTGGAAACGCCCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | CTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCGAGTGAGAGGAGAACCTaGGAGAGCAAGGTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSSSPYRGKAAACWASERRT*ESKVCG Trigger: GCCACACACCTTGCTCTCCCAGGTTCTCCTCTCACT...CGCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | GTTGGGCGTTTCCAAGTGACTTCATCCAAGGAACCGGCTGAGCCTCTTCCCTTGGCCTGCCGCATGGAATaGAGTTGCTCGGGTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGRFQVTSSKEPAEPLPLACRME*SCSGVS Trigger: GCTGACACCCGAGCAACTGCATTCCATGCGGCAGGC...CAAGGGAAGAGGCTCAGCCGGTTCCTTGGATGAAGTCACTTGGAAACGCCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | AAGCCAGGCTGGCGCCCATCTCTGAAGGTAAGGCCTCTGACCACTGACCTTCCCCCACTGACCTTCCCCTaGCATTATCCCTACTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KPGWRPSLKVRPLTTDLPPLTFP*HYPYSL Trigger: CAGTGAGTAGGGATAATGGCAGGGGAAGGTCAGTGG...GGGAAGGTCAGTGGTCAGAGGCCTTACCTTCAGAGATGGGCGCCAGCCTGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | GTGGAGAGTGAGGTGAGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCCTGTGGCCCAGTCCCTaGTGTCCCCCTCACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VESEVSRKPRGMIRETPLLWPSP*CPPHLG Trigger: GCCCAGGTGAGGGGGACAGCAGGGACTGGGCCACAG...GAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACTCACCTCACTCTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR TCA 90 bp | AGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCCCAGCCCAGTGTGGATaGACTACTCCTACAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHPSPVWMNYSYSSLCLSPAQCG*TTPTAA Trigger: GGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGG...GCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR TCA 90 bp | AGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCTGCACTCTTCCCTTCGAGCGACCGTGCAGCTaGGGGTCTGGGGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRKPRGMIRETPLCTLPFERPCS*GSGGWS Trigger: ACTCCAGCCCCCAGACCCTCAGCTGCACGGTCGCTC...GAAGGGAAGAGTGCAGAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | AGGCACTTGTCAGAGGTGGAAACACTACAGACACTGGCTGCAGCTTCGCCTTCCTGGCTAGCCCTTTCATaGCCTCCGTGCATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHLSEVETLQTLAAASPSWLALS*PPCILR Trigger: CCTGAGGATGCACGGAGGGCATGAAAGGGCTAGCCA...GGAAGGCGAAGCTGCAGCCAGTGTCTGTAGTGTTTCCACCTCTGACAAGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | CCTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCTGTCTGTCCTGTCACTaGTCTCCTTTCCTCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHAFFLVALQRESRSLLGCLSCH*SPFLMP Trigger: AGGCATGAGGAAAGGAGAGCAGTGACAGGACAGACA...GCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | CTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCGAAAGCCGCAGCTTGTTaGGCGTTTCCAAGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LMPSSSSPYRGKAAACWAKAAAC*AFPSDF Trigger: GAAGTCACTTGGAAACGCCCAACAAGCTGCGGCTTT...CGCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR TCA 90 bp | ACCCCTGAGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGAGGTGGAGAGTGAGGTaGGTAGAAAACCAAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSQPSVDELLLQQPVRWRVR*VENQEG Trigger: TCCCTCTTGGTTTTCTACTCACCTCACTCTCCACCT...CACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCTCAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | TCCGTGCATCCTCAGGCACTTGTCAGAGGTGGAAACACTACAGACACTGGCTGCGGAGAGCAAGGTGTGTaGCTAGCCCTTTCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVHPQALVRGGNTTDTGCGEQGV*LALSCP Trigger: AGGGCATGAAAGGGCTAGCCACACACCTTGCTCTCC...GCAGCCAGTGTCTGTAGTGTTTCCACCTCTGACAAGTGCCTGAGGATGCACGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | AGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCCCCCTCTCCTTTCTCTaGCTAGTGCCTTCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPSPVWMNYSYSSLCLSPLSFL*LVPSHW Trigger: CCAGTGAGAAGGCACTAGCCAGAGAAAGGAGAGGGG...GCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR TCA 90 bp | AGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCACAGCAGCCTGTGTTTaGGCAGCGAGGAGTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHPSPVWMNYSYSSLCLSTAACV*AARSQK Trigger: TTTCTGACTCCTCGCTGCTCAAACACAGGCTGCTGT...GCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | CAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACACGTGGTAGGACCTTCTaGCACTGGGCAAGCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKLWEKPRSHAHLSNKETRGRTF*HWASSA Trigger: GGCGGAGCTTGCCCAGTGGCAGAAGGTCCTACCACG...TGTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CCA 90 bp | CAAAGTCAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGCTCCGCCTGCCGCATaGAATGCAGTTGCTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSQKLWEKPRSHAHLSNKAPPAA*NAVARV Trigger: CACCCGAGCAACTGCATTCCATGCGGCAGGCGGAGC...CTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTGACTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR TCA 90 bp | GCAAAGTTCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGGTCGGGTCGATACGCTaGGCGAACGGGGCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKFCSFDIGQMRKSLVSWVGSIR*ANGASP Trigger: TGGAGAGGCCCCGTTCGCTCAGCGTATCGACCCGAC...CCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR TCA 90 bp | GTGGAGAGTGAGGTGAGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCAGTCTTCGGCAGAAGTaGGTCTCGGGAGGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VESEVSRKPRGMIRETPLSLRQK*VSGGWR Trigger: CCTCCATCCTCCCGAGACTCACTTCTGCCGAAGACT...GAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACTCACCTCACTCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | TCAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACCCGAAGACGCCATGTTaGCACTCCTCCCTTCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SETLGKATVACTPLKQGNPKTPC*HSSLRG Trigger: ACCGCGAAGGGAGGAGTGGCAACATGGCGTCTTCGG...GTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR GCA 90 bp | GTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCAGCGAGGAGTCAGAACGCATGGAATGCAGTTaGTCGGGTGTCAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VWMNYSYSSLCLSSEESERMECS*SGVSFS Trigger: GGAGAAGCTGACACCCGAGCAACTGCATTCCATGCG...TTCTGACTCCTCGCTGCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | CAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACAGCCTGCCGCATGGAATaGAGTTGCTCGGGTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLWEKPRSHAHLSNKETACRME*SCSGVS Trigger: GCTGACACCCGAGCAACTGCATTCCATGCGGCAGGC...TGTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR GCA 90 bp | CAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACATGGGCAAGCTCCGCCTaGCGCATGGAATGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLWEKPRSHAHLSNKETWASSA*RMECSC Trigger: GCAACTGCATTCCATGCGGCAGGCGGAGCTTGCCCA...TGTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR GCA 90 bp | GCCACGTCTAACCTCGTAACAACTGCGTCCCTGGAAGGTGAAGGGGGTAAACCAAAAGCCACGGTCGCATaGACACCTCTCAAACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ATSNLVTTASLEGEGGKPKATVA*TPLKQG Trigger: TCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTT...TGGTTTACCCCCTTCACCTTCCAGGGACGCAGTTGTTACGAGGTTAGACGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR GCA 90 bp | GTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCAGCGAGGAGTCAGAAACTACAGACACTGGCTaGAGCTTCGCCTTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWMNYSYSSLCLSSEESETTDTG*SFAFLP Trigger: TGGGAGGAAGGCGAAGCTGCAGCCAGTGTCTGTAGT...TTCTGACTCCTCGCTGCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | GCAAAGTTCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGAGGACCTTCTGCCACTaGGCAAGCTCCGCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AKFCSFDIGQMRKSLVSWRTFCH*ASSACR Trigger: GCGGCAGGCGGAGCTTGCCCAGTGGCAGAAGGTCCT...CCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CCA 90 bp | AGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCAAACACTACAGACACTaGCTGCAGCTTCGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHPSPVWMNYSYSSLCLSKHYRH*LQLRLP Trigger: AGGAAGGCGAAGCTGCAGCCAGTGTCTGTAGTGTTT...GCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | AGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCTGCACTCTTCCCTTCTACAGAGGACAGTGCTaGAGGCGGGCCAGAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKPRGMIRETPLCTLPFYRGQC*RRARDQ Trigger: CTGGTCTCTGGCCCGCCTCCAGCACTGTCCTCTGTA...GAAGGGAAGAGTGCAGAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | AGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCTGCACTCTTCCCTTCTCCCGTTGCTCCTGGTaGCCAGGAAAGCCCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRKPRGMIRETPLCTLPFSRCSW*PGKPFT Trigger: GGTGAAGGGCTTTCCTGGCCACCAGGAGCAACGGGA...GAAGGGAAGAGTGCAGAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR TCA 90 bp | AAATGCGTAAGTCCCTGGTTTCTTGGGCTCAATCACGGTCCAAGGTTAGTAAGATCCAGATTAGGACCCTaGCGCCCTTGCCAGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KCVSPWFLGLNHGPRLVRSRLGP*RPCQSS Trigger: CGAGCTCTGGCAAGGGCGTCAGGGTCCTAATCTGGA...TCTTACTAACCTTGGACCGTGATTGAGCCCAAGAAACCAGGGACTTACGCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR TCA 90 bp | ACCCCTGAGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCTGTGTTCTTTTCCCTCCAGTaGATTCAGAACAGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPEPSQPSVDELLLQQPVFFSLQ*IQNRSH Trigger: ATGGCTTCTGTTCTGAATTCACTGGAGGGAAAAGAA...CACAGGCTGCTGTAGGAGTAGTTCATCCACACTGGGCTGGGATGGCTCAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR TCA 90 bp | GTGGAGAGTGAGGTGAGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCAAGGCCTCTGACCACTaGCCTTCCCCTGCCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: VESEVSRKPRGMIRETPLKASDH*PSPAII Trigger: GATAATGGCAGGGGAAGGTCAGTGGTCAGAGGCCTT...GAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACTCACCTCACTCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR GCA 90 bp | GCAAAGTTCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGACACCAGGGCCCCGATaGCTAGGCCGGTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AKFCSFDIGQMRKSLVSWTPGPR*LGRSRC Trigger: ACATCGTGACCGGCCTAGGCATCGGGGCCCTGGTGT...CCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGAGTGAGGTGAGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCCACCAGGGCCCACCATaGAGCTTGTGTTCTCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VESEVSRKPRGMIRETPLHQGPP*SLCSQN Trigger: ATTCTGAGAACACAAGCTCCATGGTGGGCCCTGGTG...GAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACTCACCTCACTCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR TCA 90 bp | GCCACGTCTAACCTCGTAACAACTGCGTCCCTGGAAGGTGAAGGGGGTAAACCAAGGCCAACAATGTTGTaGGCAGGATTCAATTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ATSNLVTTASLEGEGGKPRPTML*AGFNFY Trigger: GTAGAAATTGAATCCTGCTCACAACATTGTTGGCCT...TGGTTTACCCCCTTCACCTTCCAGGGACGCAGTTGTTACGAGGTTAGACGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGGCTCCGCATGGAATGCAGTTaGTCGGGTGTCAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVLLTLAKCVSPWFLGLRMECS*SGVSFS Trigger: GGAGAAGCTGACACCCGAGCAACTGCATTCCATGCG...GAGCCCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGTTCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGGGGCTCGGGCAGCTTTaGCCTCGTCTTCTAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKFCSFDIGQMRKSLVSWGLGQL*PRLLAH Trigger: ATGAGCTAGAAGACGAGGCCAAAGCTGCCCGAGCCC...CCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR GCA 90 bp | CAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACATGTAGGCTCAAACACTaGACAGAGCTGCCACGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QKLWEKPRSHAHLSNKETCRLKH*TELPRL Trigger: TAGACGTGGCAGCTCTGTGCAGTGTTTGAGCCTACA...TGTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGAGTGAGGTGAGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCGCCTTCCTCCCACCTTaGAGGTTTCTTCATCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VESEVSRKPRGMIRETPLAFLPP*RFLHHF Trigger: AAAGTGATGAAGAAACCTCCAAGGTGGGAGGAAGGC...GAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACTCACCTCACTCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| 3UTR CAA 72 bp | CAAGTGTGCAGTGGGCAAAGTTCTGTTCTTTTGACATaGGCCAAATGCGTAAGTCCCTGGTTTCTTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVCSGQSSVLLT*AKCVSPWFLGL Trigger: GAGCCCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGCCCACTGCACACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR TCA 90 bp | AGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCTGCACTCTTCCCTTCGAAAACCAAGAGGGATaGTTAGGGAGACTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKPRGMIRETPLCTLPFENQEG*LGRLHS Trigger: AGAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTC...GAAGGGAAGAGTGCAGAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CCA 90 bp | AGTAGAAAACCAAGAGGGATGATTAGGGAGACTCCACTCTGCACTCTTCCCTTCATCCCCCACTCTCTCTaGTTCTCCAAAACCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRKPRGMIRETPLCTLPFIPHSL*FSKTFN Trigger: GTTGAAGGTTTTGGAGAACCAGAGAGAGTGGGGGAT...GAAGGGAAGAGTGCAGAGTGGAGTCTCCCTAATCATCCCTCTTGGTTTTCTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000586680.1 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGGCTCCCAGCAGGTTGGACATaGTCAATACCCATCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SSVLLTLAKCVSPWFLGLPAGWT*SIPIQI Trigger: AATCTGGATGGGTATTGATCATGTCCAACCTGCTGG...GAGCCCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
||
| CDS-3UTR CCA 90 bp | TATTCTCAATTTGACCCTATGTATCCCACTGTAGGCTCAAACACTGCACAGAGCAAGTCCCTGGTTTCTTaGGCTCAATCACGGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSQFDPMYPTVGSNTAQSKSLVS*AQSRSK Trigger: CTTGGACCGTGATTGAGCCCAAGAAACCAGGGACTT...GCTCTGTGCAGTGTTTGAGCCTACAGTGGGATACATAGGGTCAAATTGAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328434.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACAAAATGCGTAAGTCCCTaGTTTCTTGGGCTCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKLWEKPRSHAHLSNKETKCVSP*FLGLNH Trigger: GTGATTGAGCCCAAGAAACCAGGGACTTACGCATTT...TGTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR GCA 90 bp | AAATGCGTAAGTCCCTGGTTTCTTGGGCTCAATCACGGTCCAAGGTTAGTAAGATGTACACAGCAAGTGTaGAGTGGGCAAAGTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KCVSPWFLGLNHGPRLVRCTQQV*SGQSSV Trigger: AACAGAACTTTGCCCACTGCACACTTGCTGTGTACA...TCTTACTAACCTTGGACCGTGATTGAGCCCAAGAAACCAGGGACTTACGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CCA 90 bp | AAATGCGTAAGTCCCTGGTTTCTTGGGCTCAATCACGGTCCAAGGTTAGTAAGACAAAGTCAGAAACTTTaGGAAAAGCCACGGTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: KCVSPWFLGLNHGPRLVRQSQKL*EKPRSH Trigger: ATGCGACCGTGGCTTTTCCCAAAGTTTCTGACTTTG...TCTTACTAACCTTGGACCGTGATTGAGCCCAAGAAACCAGGGACTTACGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| 3UTR CAA 72 bp | ACACAGCAAGTGTGCAGTGGGCAAAGTTCTGTTCTTTaGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TQQVCSGQSSVL*TLAKCVSPWFL Trigger: AAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGCCCACTGCACACTTGCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS CCA 90 bp | GTCACGATGTTCCGGGTTCGCCGCCGTGGTAGGACCTTCTGCCACTaGGCAAGCTCCGCCTGCCGCATGGAATGCAGTTGCTCGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: VTMFRVRRRGRTFCH*ASSACRMECSCSGV Trigger: GACACCCGAGCAACTGCATTCCATGCGGCAGGCGGAGCTTGCCCAGTGGCAGAAGGTCCTACCACGGCGGCGAACCCGGAACATCGTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328434.8 ENST00000586680.1 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGCTGGCGCCCATCTCTGAAGGTAAGGCCTCTGACCACTGACCTTCCCCCCTTCCCCCTCCCGTaGCTCCTGGTGGCCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: KPGWRPSLKVRPLTTDLPPFPLP*LLVARK Trigger: TTTCCTGGCCACCAGGAGCAACGGGAGGGGGAAGGG...GGGAAGGTCAGTGGTCAGAGGCCTTACCTTCAGAGATGGGCGCCAGCCTGGCTT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CAA 90 bp | GCGGGCCAGAGACCAGGGAAGCTCTGGCTGAGAGCGACCGTGCAGCTGAGGGTCTACAGCAGCCTGTGTTaGAGCAGCGAGGAGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: AGQRPGKLWLRATVQLRVYSSLC*SSEESE Trigger: TTCTGACTCCTCGCTGCTCAAACACAGGCTGCTGTA...GACCCTCAGCTGCACGGTCGCTCTCAGCCAGAGCTTCCCTGGTCTCTGGCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS TCA 90 bp | TGCAGTTGCTCGGGTGTCAGCTTCTCCCGAGTCGGGTCGATACGCTaGGCGAACGGGGCCTCTCCACGCTTAGAATCCAGAGGGTCACCA | + |
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Preference number: 5 (lower is better) Translates to: CSCSGVSFSRVGSIR*ANGASPRLESRGSP Trigger: TGGTGACCCTCTGGATTCTAAGCGTGGAGAGGCCCCGTTCGCTCAGCGTATCGACCCGACTCGGGAGAAGCTGACACCCGAGCAACTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328434.8 ENST00000586680.1 |
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| CDS-3UTR CAA 90 bp | CAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACAAGGACCCTGACGCCCTaGCCAGAGCTCGGGCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: QKLWEKPRSHAHLSNKETRTLTP*PELGLG Trigger: CCCGAGCCCGAGCTCTGGCAAGGGCGTCAGGGTCCT...TGTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CAA 90 bp | CTCATGCCTTCTTCCTCGTCGCCCTACAGAGGGAAAGCCGCAGCTTGTTGGGCGGGCCCACCATGGAGCTaGTGTTCTCAGAATCTGATG | + |
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Preference number: 5 (lower is better) Translates to: LMPSSSSPYRGKAAACWAGPPWS*CSQNLM Trigger: CATCAGATTCTGAGAACACAAGCTCCATGGTGGGCC...CGCCCAACAAGCTGCGGCTTTCCCTCTGTAGGGCGACGAGGAAGAAGGCATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGCTGGCGCCCATCTCTGAAGGTAAGGCCTCTGACCACTGACCTTCCCCGCCTTCCTCCCACCTaGGAGGTTTCTTCATCACTT | + |
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Preference number: 5 (lower is better) Translates to: KPGWRPSLKVRPLTTDLPRLPPT*EVSSSL Trigger: AAGTGATGAAGAAACCTCCAAGGTGGGAGGAAGGCG...GGGAAGGTCAGTGGTCAGAGGCCTTACCTTCAGAGATGGGCGCCAGCCTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CAA 90 bp | GTGTGGATGAACTACTCCTACAGCAGCCTGTGTTTGAGCAGCGAGGAGTCAGAACCGCATGGAATGCAGTaGCTCGGGTGTCAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VWMNYSYSSLCLSSEESEPHGMQ*LGCQLL Trigger: GAGAAGCTGACACCCGAGCAACTGCATTCCATGCGG...TTCTGACTCCTCGCTGCTCAAACACAGGCTGCTGTAGGAGTAGTTCATCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586680.1 |
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| CDS-3UTR CAA 90 bp | CAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACACGGGCTCGGGCAGCTTaGGCCTCGTCTTCTAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: QKLWEKPRSHAHLSNKETRARAA*ASSSSS Trigger: TGAGCTAGAAGACGAGGCCAAAGCTGCCCGAGCCCG...TGTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGTTCTGTTCTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGCCCGAAGACGCCATGTaGCCACTCCTCCCTTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: AKFCSFDIGQMRKSLVSWPEDAM*PLLPSR Trigger: CCGCGAAGGGAGGAGTGGCAACATGGCGTCTTCGGG...CCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAGAACAGAACTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CAA 90 bp | TCAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACCCGCATGGAATGCAGTaGCTCGGGTGTCAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SETLGKATVACTPLKQGNPHGMQ*LGCQLL Trigger: GAGAAGCTGACACCCGAGCAACTGCATTCCATGCGG...GTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CAA 90 bp | CAGAAACTTTGGGAAAAGCCACGGTCGCATGCACACCTCTCAAACAAGGAAACAACAAAGTCAGAAACTTaGGGAAAAGCCACGGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: QKLWEKPRSHAHLSNKETTKSET*GKATVA Trigger: TGCGACCGTGGCTTTTCCCAAAGTTTCTGACTTTGT...TGTTTCCTTGTTTGAGAGGTGTGCATGCGACCGTGGCTTTTCCCAAAGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS-3UTR CAA 90 bp | CTTTTGACATTGGCCAAATGCGTAAGTCCCTGGTTTCTTGGGCTCAATCACGGTTCTGTTCTTTTGACATaGGCCAAATGCGTAAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: LLTLAKCVSPWFLGLNHGSVLLT*AKCVSP Trigger: GGGACTTACGCATTTGGCCAATGTCAAAAGAACAGA...ACCGTGATTGAGCCCAAGAAACCAGGGACTTACGCATTTGGCCAATGTCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328434.8 |
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| CDS CCA 72 bp | TTCCGGGTTCGCCGCCGTGGTAGGACCTTCTGCCACTaGGCAAGCTCCGCCTGCCGCATGGAATGCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: FRVRRRGRTFCH*ASSACRMECSC Trigger: GCAACTGCATTCCATGCGGCAGGCGGAGCTTGCCCAGTGGCAGAAGGTCCTACCACGGCGGCGAACCCGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328434.8 ENST00000586680.1 |
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| CDS TCA 72 bp | TCGGGTGTCAGCTTCTCCCGAGTCGGGTCGATACGCTaGGCGAACGGGGCCTCTCCACGCTTAGAATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGVSFSRVGSIR*ANGASPRLESR Trigger: TCTGGATTCTAAGCGTGGAGAGGCCCCGTTCGCTCAGCGTATCGACCCGACTCGGGAGAAGCTGACACCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328434.8 ENST00000586680.1 |
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