RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106603

Ensembl transcript IDs: ENST00000310564.10, ENST00000395879.5, ENST00000415076.6, ENST00000418140.5, ENST00000420441.1, ENST00000431651.5, ENST00000438444.5, ENST00000446330.6, ENST00000446564.5, ENST00000448704.5, ENST00000451651.5, ENST00000457939.1, ENST00000470156.1, ENST00000478504.1, ENST00000488813.1, ENST00000490251.1

Found 451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGAAGCCAAACTGAGTGCCCTCCTGAGGGTGCCCTCTCGAGAGTaGCCCATGTCCAGGACCCATGCTGTGGGGGCCCTGCCACCCCCA +
Preference number: 1 (lower is better)
Translates to: SEAKLSALLRVPSRE*PMSRTHAVGALPPP
Trigger: TGGGGGTGGCAGGGCCCCCACAGCATGGGTCCTGGACATGGGCCACTCTCGAGAGGGCACCCTCAGGAGGGCACTCAGTTTGGCTTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR GCA 90 bp CAGGCCCCCTCCAGACTCTGCAACTCCACCAACTCTGCAGGATGGTaGAGAAAGGCTGGAGAGGACACTGGAGCCTGTCTGCTTGTCTGC +
Preference number: 1 (lower is better)
Translates to: QAPSRLCNSTNSAGW*RKAGEDTGACLLVC
Trigger: GCAGACAAGCAGACAGGCTCCAGTGTCCTCTCCAGCCTTTCTGCACCATCCTGCAGAGTTGGTGGAGTTGCAGAGTCTGGAGGGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR GCA 90 bp GCGAGCATTCAGCCCACCATCCTGACAGACACAGCCCAGACTGTGTaGCAAGCCCCGCATGGCCAGGAAGCACAACCACTTTGTCTCAGG +
Preference number: 1 (lower is better)
Translates to: ASIQPTILTDTAQTV*QAPHGQEAQPLCLR
Trigger: CCTGAGACAAAGTGGTTGTGCTTCCTGGCCATGCGGGGCTTGGCACACAGTCTGGGCTGTGTCTGTCAGGATGGTGGGCTGAATGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR TCA 90 bp CAGCCTCCTAAGGGAGAAAGGCTGTCACACCAGAAAGCTGAACCCTaGCCCAAAAGTGCACCCATCCCTCTCATGTCCTGCCCCTGTCCC +
Preference number: 1 (lower is better)
Translates to: QPPKGERLSHQKAEP*PKSAPIPLMSCPCP
Trigger: GGGACAGGGGCAGGACATGAGAGGGATGGGTGCACTTTTGGGTCAGGGTTCAGCTTTCTGGTGTGACAGCCTTTCTCCCTTAGGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR TCA 90 bp CCGCCCTCCCTCATTTGCTTCCTTTCCAAATGCCAGGGTTGGTTCTaGAGCCAAACTGAGTGCCCTCCTGAGGGTGCCCTCTCGAGAGTG +
Preference number: 1 (lower is better)
Translates to: PPSLICFLSKCQGWF*SQTECPPEGALSRV
Trigger: CACTCTCGAGAGGGCACCCTCAGGAGGGCACTCAGTTTGGCTTCAGAACCAACCCTGGCATTTGGAAAGGAAGCAAATGAGGGAGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR GCA 90 bp CTGAATCATTCCTGGGAACGCTCATCTCAGGCCCCCTCCAGACTCTaGAACTCCACCAACTCTGCAGGATGGTGCAGAAAGGCTGGAGAG +
Preference number: 1 (lower is better)
Translates to: LNHSWERSSQAPSRL*NSTNSAGWCRKAGE
Trigger: CTCTCCAGCCTTTCTGCACCATCCTGCAGAGTTGGTGGAGTTGCAGAGTCTGGAGGGGGCCTGAGATGAGCGTTCCCAGGAATGATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR TCA 90 bp CCCTGTCCCTTTGGCAGAGGGAAGAGGAGGCCAAATTATTCAGTCTaGATCATTCCTGGGAACGCTCATCTCAGGCCCCCTCCAGACTCT +
Preference number: 1 (lower is better)
Translates to: PCPFGRGKRRPNYSV*IIPGNAHLRPPPDS
Trigger: AGAGTCTGGAGGGGGCCTGAGATGAGCGTTCCCAGGAATGATTCAGACTGAATAATTTGGCCTCCTCTTCCCTCTGCCAAAGGGACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR CCA 90 bp TGGCAGAGGGAAGAGGAGGCCAAATTATTCAGTCTGAATCATTCCTaGGAACGCTCATCTCAGGCCCCCTCCAGACTCTGCAACTCCACC +
Preference number: 1 (lower is better)
Translates to: WQREEEAKLFSLNHS*ERSSQAPSRLCNST
Trigger: GGTGGAGTTGCAGAGTCTGGAGGGGGCCTGAGATGAGCGTTCCCAGGAATGATTCAGACTGAATAATTTGGCCTCCTCTTCCCTCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR CCA 90 bp TCAGGCCAACTGGTAAACAGGAAGCTTATCCTTTGTGGCAATGGCTaGTCCTGTAAGCCTGCGAATGGGCTGGAGCTGTCACTGGCTCCT +
Preference number: 1 (lower is better)
Translates to: SGQLVNRKLILCGNG*SCKPANGLELSLAP
Trigger: AGGAGCCAGTGACAGCTCCAGCCCATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAGGATAAGCTTCCTGTTTACCAGTTGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR CCA 90 bp ACCCAAAAGTGCACCCATCCCTCTCATGTCCTGCCCCTGTCCCTTTaGCAGAGGGAAGAGGAGGCCAAATTATTCAGTCTGAATCATTCC +
Preference number: 1 (lower is better)
Translates to: TQKCTHPSHVLPLSL*QREEEAKLFSLNHS
Trigger: GGAATGATTCAGACTGAATAATTTGGCCTCCTCTTCCCTCTGCCAAAGGGACAGGGGCAGGACATGAGAGGGATGGGTGCACTTTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR TCA 90 bp CTGGCTGCTGACAGTAATTGTGGCCTGTCTTTACAAATTCAAATTTaGGTGCAGTGGGGCTGGAAGCGGCATCTGTCGGGATTTTGCCAT +
Preference number: 1 (lower is better)
Translates to: LAADSNCGLSLQIQI*VQWGWKRHLSGFCH
Trigger: ATGGCAAAATCCCGACAGATGCCGCTTCCAGCCCCACTGCACTCAAATTTGAATTTGTAAAGACAGGCCACAATTACTGTCAGCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR GCA 90 bp CTGCTGACAGTAATTGTGGCCTGTCTTTACAAATTCAAATTTGAGTaGAGTGGGGCTGGAAGCGGCATCTGTCGGGATTTTGCCATCGTG +
Preference number: 1 (lower is better)
Translates to: LLTVIVACLYKFKFE*SGAGSGICRDFAIV
Trigger: CACGATGGCAAAATCCCGACAGATGCCGCTTCCAGCCCCACTGCACTCAAATTTGAATTTGTAAAGACAGGCCACAATTACTGTCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR CCA 90 bp TTATCCTTTGTGGCAATGGCTGGTCCTGTAAGCCTGCGAATGGGCTaGAGCTGTCACTGGCTCCTTTCATATTTTGAAAAATGCACCACC +
Preference number: 1 (lower is better)
Translates to: LSFVAMAGPVSLRMG*SCHWLLSYFEKCTT
Trigger: GGTGGTGCATTTTTCAAAATATGAAAGGAGCCAGTGACAGCTCCAGCCCATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAGGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR TCA 90 bp AAGCCTGCGAATGGGCTGGAGCTGTCACTGGCTCCTTTCATATTTTaGAAAATGCACCACCCTTGGGATGAGGAAACTCTGGTTATGACT +
Preference number: 1 (lower is better)
Translates to: KPANGLELSLAPFIF*KMHHPWDEETLVMT
Trigger: AGTCATAACCAGAGTTTCCTCATCCCAAGGGTGGTGCATTTTTCAAAATATGAAAGGAGCCAGTGACAGCTCCAGCCCATTCGCAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR GCA 90 bp GTGTGCACTGGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATaGATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGA +
Preference number: 1 (lower is better)
Translates to: VCTGLKAHRALLGFL*ILVLVLLFVLVAPG
Trigger: TCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR GCA 90 bp ATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTaGTTTGCTGGGCTTCTTATGCATATTAGTCCTGGTCCTTTTATT +
Preference number: 1 (lower is better)
Translates to: ILMEPLCVHWTESPS*FAGLLMHISPGPFI
Trigger: AATAAAAGGACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR CCA 90 bp CCTCACCTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTaGCCCAATTTCAATACTGTTGTGTCTCAGGGAATAGGGAGGCCA +
Preference number: 1 (lower is better)
Translates to: PHLSHLVRGHCGVIN*PNFNTVVSQGIGRP
Trigger: TGGCCTCCCTATTCCCTGAGACACAACAGTATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAGGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR TCA 90 bp TATTTTGAAAAATGCACCACCCTTGGGATGAGGAAACTCTGGTTATaGCTCAGGCTGAATGAACAGATGGAGGGATGCCAGCTCGGTAAA +
Preference number: 1 (lower is better)
Translates to: YFEKCTTLGMRKLWL*LRLNEQMEGCQLGK
Trigger: TTTACCGAGCTGGCATCCCTCCATCTGTTCATTCAGCCTGAGTCATAACCAGAGTTTCCTCATCCCAAGGGTGGTGCATTTTTCAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR CCA 90 bp TTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTaGAGGAAGAGGTATAACACTTTCTACCATCCTAACCTTTACGTG +
Preference number: 1 (lower is better)
Translates to: FGFPCQCHQCHRLQL*RKRYNTFYHPNLYV
Trigger: CACGTAAAGGTTAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR CCA 90 bp TCTTTATATAATCTCAGAATCTTGATGGAGCCCCTGTGTGTGCACTaGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATT +
Preference number: 1 (lower is better)
Translates to: SLYNLRILMEPLCVH*TESPSCFAGLLMHI
Trigger: AATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCTGAGATTATATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR CCA 90 bp CTACAGCTTCTCCATCAGCACTTGCTGCGTCACGTTGTACTTTTATaGAGATGGCTTCTTTACTTACATCTCATGAACACTGCTAGCTTC +
Preference number: 1 (lower is better)
Translates to: LQLLHQHLLRHVVLL*RWLLYLHLMNTASF
Trigger: GAAGCTAGCAGTGTTCATGAGATGTAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAGAAGCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CCA 90 bp GTTGATAGTTCTTCTGGCACTAAAAGAACTTGTCTCACTTCCTTCTaGCCTCCATGGTTTCCAGAGAGAAATCCACTGTCATCTGAGTTA +
Preference number: 1 (lower is better)
Translates to: VDSSSGTKRTCLTSF*PPWFPERNPLSSEL
Trigger: TAACTCAGATGACAGTGGATTTCTCTCTGGAAACCATGGAGGCCAGAAGGAAGTGAGACAAGTTCTTTTAGTGCCAGAAGAACTATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR TCA 90 bp AGAGGTATAACACTTTCTACCATCCTAACCTTTACGTGGACTGAGTaGAGAAGGGATGGATTCTCAAAACCAGTTGTGTTTCATCATCCC +
Preference number: 1 (lower is better)
Translates to: RGITLSTILTFTWTE*RRDGFSKPVVFHHP
Trigger: GGGATGATGAAACACAACTGGTTTTGAGAATCCATCCCTTCTTCACTCAGTCCACGTAAAGGTTAGGATGGTAGAAAGTGTTATACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415076.6
3UTR GCA 90 bp CTAGATCTTCTGTGTAACTTCTACAGCTTCTCCATCAGCACTTGCTaGGTCACGTTGTACTTTTATGGAGATGGCTTCTTTACTTACATC +
Preference number: 1 (lower is better)
Translates to: LDLLCNFYSFSISTC*VTLYFYGDGFFTYI
Trigger: GATGTAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAGAAGCTGTAGAAGTTACACAGAAGATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR GCA 90 bp AAGCTAGATCTTCTGTGTAACTTCTACAGCTTCTCCATCAGCACTTaGTGCGTCACGTTGTACTTTTATGGAGATGGCTTCTTTACTTAC +
Preference number: 1 (lower is better)
Translates to: KLDLLCNFYSFSIST*CVTLYFYGDGFFTY
Trigger: GTAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAGAAGCTGTAGAAGTTACACAGAAGATCTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR TCA 90 bp AGGAAGAGGTATAACACTTTCTACCATCCTAACCTTTACGTGGACTaGGTGAAGAAGGGATGGATTCTCAAAACCAGTTGTGTTTCATCA +
Preference number: 1 (lower is better)
Translates to: RKRYNTFYHPNLYVD*VKKGWILKTSCVSS
Trigger: TGATGAAACACAACTGGTTTTGAGAATCCATCCCTTCTTCACTCAGTCCACGTAAAGGTTAGGATGGTAGAAAGTGTTATACCTCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415076.6
3UTR TCA 90 bp GACAGTATATCAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGCTaGAACCAGGGTAAGCAAAACAAGGAAATTTTAGTGGCAAACAAG +
Preference number: 1 (lower is better)
Translates to: DSISVMFLSSDQGAS*NQGKQNKEILVANK
Trigger: CTTGTTTGCCACTAAAATTTCCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACATAACTGATATACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
3UTR TCA 90 bp AGGAAGAGGTATAACACTTTCTACCATCCTAACCTTTACGTGGACTaGGTGAAGAAGGGATGGATTCTCAAAACCAGTTGTGTTTCTGAA +
Preference number: 1 (lower is better)
Translates to: RKRYNTFYHPNLYVD*VKKGWILKTSCVSE
Trigger: TTCAGAAACACAACTGGTTTTGAGAATCCATCCCTTCTTCACTCAGTCCACGTAAAGGTTAGGATGGTAGAAAGTGTTATACCTCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
3UTR TCA 90 bp CTCAATATTCCACACATCTCACAATGTTCAACAGCTCTTGTGTTGTaGGATTCAATTCTCACCTCATACACAAGCACTAACATTACCACA +
Preference number: 1 (lower is better)
Translates to: LNIPHISQCSTALVL*DSILTSYTSTNITT
Trigger: TGTGGTAATGTTAGTGCTTGTGTATGAGGTGAGAATTGAATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTGGAATATTGAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
3UTR CCA 90 bp ACCCACAGTAGAACTTCAAAATTAGGAGTCAATCCTCTCAAACCCTaGCCACAGCTAAGTTTATGGAATATTCTAAATCTTTTGTCATTT +
Preference number: 1 (lower is better)
Translates to: THSRTSKLGVNPLKP*PQLSLWNILNLLSF
Trigger: AAATGACAAAAGATTTAGAATATTCCATAAACTTAGCTGTGGCCAGGGTTTGAGAGGATTGACTCCTAATTTTGAAGTTCTACTGTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR TCA 90 bp GAATCATTCCTGGGAACGCTCATCTCAGGCCCCCTCCAGACTCTGCAACTCCACGTGTGTGCACTGGACTaGAAGCCCATCGTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: ESFLGTLISGPLQTLQLHVCALD*KPIVLC
Trigger: GCAAAGCACGATGGGCTTTCAGTCCAGTGCACACAC...GTGGAGTTGCAGAGTCTGGAGGGGGCCTGAGATGAGCGTTCCCAGGAATGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR CCA 90 bp GAATCATTCCTGGGAACGCTCATCTCAGGCCCCCTCCAGACTCTGCAACTCCACGATGACGAGCCAAGCTaGGTGGGGATAAAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: ESFLGTLISGPLQTLQLHDDEPS*VGIKEP
Trigger: AGGCTCCTTTATCCCCACCCAGCTTGGCTCGTCATC...GTGGAGTTGCAGAGTCTGGAGGGGGCCTGAGATGAGCGTTCCCAGGAATGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR CCA 90 bp CAGACTGTGTGCCAAGCCCCGCATGGCCAGGAAGCACAACCACTTTGTCTCAGGAGCCAGACTGGGTTATaGAGAGGTTCCCAGAGTGTT +
Preference number: 2 (lower is better)
Translates to: QTVCQAPHGQEAQPLCLRSQTGL*RGSQSV
Trigger: AACACTCTGGGAACCTCTCCATAACCCAGTCTGGCT...CCTGAGACAAAGTGGTTGTGCTTCCTGGCCATGCGGGGCTTGGCACACAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR CCA 90 bp CTCAGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGCAGTCTGAATCATTCCTaGGAACGCTCATCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LRILMEPLCVHWTESPSCSLNHS*ERSSQA
Trigger: GGCCTGAGATGAGCGTTCCCAGGAATGATTCAGACT...GCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR CAA 90 bp GACCCAAAAGTGCACCCATCCCTCTCATGTCCTGCCCCTGTCCCTTaGGCAGAGGGAAGAGGAGGCCAAATTATTCAGTCTGAATCATTC +
Preference number: 2 (lower is better)
Translates to: DPKVHPSLSCPAPVP*AEGRGGQIIQSESF
Trigger: GAATGATTCAGACTGAATAATTTGGCCTCCTCTTCCCTCTGCCAAAGGGACAGGGGCAGGACATGAGAGGGATGGGTGCACTTTTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR GCA 90 bp ACAGGAAGCTTATCCTTTGTGGCAATGGCTGGTCCTGTAAGCCTGCGAATGGGCGAACAGATGGAGGGATaGCAGCTCGGTAAATACAGC +
Preference number: 2 (lower is better)
Translates to: TGSLSFVAMAGPVSLRMGEQMEG*QLGKYS
Trigger: GCTGTATTTACCGAGCTGGCATCCCTCCATCTGTTC...GCCCATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAGGATAAGCTTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR CCA 90 bp GTAAACAGGAAGCTTATCCTTTGTGGCAATGGCTGGTCCTGTAAGCCTGCGAATCCCCTGTGTGTGCACTaGACTGAAAGCCCATCGTGC +
Preference number: 2 (lower is better)
Translates to: VNRKLILCGNGWSCKPANPLCVH*TESPSC
Trigger: GCACGATGGGCTTTCAGTCCAGTGCACACACAGGGG...ATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAGGATAAGCTTCCTGTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR GCA 90 bp ATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGACACGAGAGCAGAGTGGGAAACAATaGAGAAAATGCCCATCCCTC +
Preference number: 2 (lower is better)
Translates to: MERFPECYSFQRQHETREQSGKQ*RKCPSL
Trigger: GAGGGATGGGCATTTTCTGCATTGTTTCCCACTCTG...CTCTCGTGTCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
3UTR-3UTR GCA 90 bp GCTGGACGCACAGCCACAGCTTTCCCCACCTGTGAACCATCTGGTATTCCCCTTTTGCTGGGCTTCTTATaGATATTAGTCCTGGTCCTT +
Preference number: 2 (lower is better)
Translates to: AGRTATAFPTCEPSGIPLLLGFL*ILVLVL
Trigger: AAGGACCAGGACTAATATGCATAAGAAGCCCAGCAA...AAGGGGAATACCAGATGGTTCACAGGTGGGGAAAGCTGTGGCTGTGCGTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR GCA 90 bp AGTGGGGCTGGAAGCGGCATCTGTCGGGATTTTGCCATCGTGGTCTCTGCTTTTAAGCCCATCGTGCTTTaGTGGGCTTCTTATGCATAT +
Preference number: 2 (lower is better)
Translates to: SGAGSGICRDFAIVVSAFKPIVL*WASYAY
Trigger: ATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTT...AAAAGCAGAGACCACGATGGCAAAATCCCGACAGATGCCGCTTCCAGCCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR GCA 90 bp ACTGGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATTAGTCCTGGGATTCCCAGTTTTGTaGCAAGGGGATTTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: TGLKAHRALLGFLCILVLGFPVL*QGDLPG
Trigger: GCCGGGCAAATCCCCTTGGCACAAAACTGGGAATCC...CAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR CCA 90 bp GCTCCCAGAGGCATTGACCGCCTGCTTCCTGCATACTTAAAAACAAAAGATACAAGCCTGCGAATGGGCTaGAGCTGTCACTGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: APRGIDRLLPAYLKTKDTSLRMG*SCHWLL
Trigger: AAGGAGCCAGTGACAGCTCCAGCCCATTCGCAGGCT...TGTATCTTTTGTTTTTAAGTATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR TCA 90 bp AAGGAAGCCAGAAAGGAGGCCAGACCGCCCTCCCTCATTTGCTTCCTTTCCAAATGCTCCTGGAAAAACTaGGATTACAGGATACAGAGG +
Preference number: 2 (lower is better)
Translates to: KEARKEARPPSLICFLSKCSWKN*DYRIQR
Trigger: CCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCA...TTTGGAAAGGAAGCAAATGAGGGAGGGCGGTCTGGCCTCCTTTCTGGCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR CCA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGTTGGTGTAGGGCTTTaGCTTTCCATGCCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: CRALAFHASVISVIGSNSVGVGL*LSMPVS
Trigger: TGACACTGGCATGGAAAGCCAAAGCCCTACACCAAC...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp TGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAACATCATCCCACTGGTaGCTGGAAAACTGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: CAGWCRALAFHASVISVITSSHW*LENWVA
Trigger: TGCAACCCAGTTTTCCAGCCACCAGTGGGATGATGT...TATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGCAACATCATCCCACTaGTGGCTGGAAAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: CRALAFHASVISVIGSNSATSSH*WLENWV
Trigger: AACCCAGTTTTCCAGCCACCAGTGGGATGATGTTGC...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp TGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAACAAGGGAGATGAGGGAAGGATaGACTAGAAGCAAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: CSFQVIRVPAETRVSKTREMREG*TRSKLG
Trigger: ACCCAGCTTGCTTCTAGTCCATCCTTCCCTCATCTC...CCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
3UTR-3UTR CCA 90 bp TGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAACAAGGGTTGGTGTAGGGCTTTaGCTTTCCATGCCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: CSFQVIRVPAETRVSKTRVGVGL*LSMPVS
Trigger: TGACACTGGCATGGAAAGCCAAAGCCCTACACCAAC...CCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
3UTR-3UTR CCA 90 bp TGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAAGTAAGTGTGCTGGTTaGTGTAGGGCTTTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: CAGWCRALAFHASVISVISKCAG*CRALAF
Trigger: GAAAGCCAAAGCCCTACACCAACCAGCACACTTACT...TATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp CTTGCTCATGGTCCCTCCTCCATTAAATCAACAGCAGAGAATGAAAGTGCAAAACCCCTGTGTGTGCACTaGACTGAAAGCCCATCGTGC +
Preference number: 2 (lower is better)
Translates to: LAHGPSSIKSTAENESAKPLCVH*TESPSC
Trigger: GCACGATGGGCTTTCAGTCCAGTGCACACACAGGGG...TTTTGCACTTTCATTCTCTGCTGTTGATTTAATGGAGGAGGGACCATGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR CCA 90 bp TGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAACAAGGGCAACATCATCCCACTaGTGGCTGGAAAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: CSFQVIRVPAETRVSKTRATSSH*WLENWV
Trigger: AACCCAGTTTTCCAGCCACCAGTGGGATGATGTTGC...CCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446330.6
3UTR-3UTR CCA 90 bp GGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCTCCTCCCTTTGTGGCAATGGCTaGTCCTGTAAGCCTGCGAAT +
Preference number: 2 (lower is better)
Translates to: GSYSQRNGGLAFKITLSSLCGNG*SCKPAN
Trigger: ATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAG...GGAGGAGAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR CAA 90 bp GTAGATCAATTTGGAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTaGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCT +
Preference number: 2 (lower is better)
Translates to: VDQFGTSKCAGWCRA*AFHASVISVIGSNS
Trigger: AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR TCA 90 bp ACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGAAAGTTAAAGCACAAGTaGACCCTAAAGACCAGGAGA +
Preference number: 2 (lower is better)
Translates to: TGLWRGSQSVTASNASMRKLKHK*TLKTRR
Trigger: TCTCCTGGTCTTTAGGGTTCACTTGTGCTTTAACTT...TCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
3UTR-3UTR TCA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCAGCTGCACTAGCCCCTaGCAAGAGTCAGCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTSCTSP*QESACP
Trigger: AGGACAAGCTGACTCTTGTCAGGGGCTAGTGCAGCT...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR GCA 90 bp TGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAACAAGGGGCTTTGGCTTTCCATaGCAGTGTCATCAGTGTCAT +
Preference number: 2 (lower is better)
Translates to: CSFQVIRVPAETRVSKTRGFGFP*QCHQCH
Trigger: ATGACACTGATGACACTGGCATGGAAAGCCAAAGCC...CCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
3UTR-3UTR GCA 90 bp TGGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATTAGTCCTGGTCAGAGTGGGAAACAATaGAGAAAATGCCCATCCCTC +
Preference number: 2 (lower is better)
Translates to: WTESPSCFAGLLMHISPGQSGKQ*RKCPSL
Trigger: GAGGGATGGGCATTTTCTGCATTGTTTCCCACTCTG...ACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR GCA 90 bp TACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCACACTGGAGCCTGTCTaGTTGTCTGCTGGTGACACT +
Preference number: 2 (lower is better)
Translates to: YRGSYSQRNGGLAFKITLTLEPV*LSAGDT
Trigger: AGTGTCACCAGCAGACAAGCAGACAGGCTCCAGTGT...GAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR CCA 90 bp GTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATCCTAACCGAGATGAGGGAAGGATaGACTAGAAGCAAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: VIGSNSGGRGITLSTILTEMREG*TRSKLG
Trigger: ACCCAGCTTGCTTCTAGTCCATCCTTCCCTCATCTC...GGTTAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp CAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCGAGATGAGGGAAGGATaGACTAGAAGCAAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: QCHQCHRLQLWRKRYNTFEMREG*TRSKLG
Trigger: ACCCAGCTTGCTTCTAGTCCATCCTTCCCTCATCTC...GAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp TTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAGTTTCATCATCCCACTaGTGGCTGGAAAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: FHASVISVIGSNSGGRGIVSSSH*WLENWV
Trigger: AACCCAGTTTTCCAGCCACCAGTGGGATGATGAAAC...TATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415076.6
3UTR-3UTR CCA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTCATAGGCTCCAACTCTaGAGGAAGAGGTATAACACT +
Preference number: 2 (lower is better)
Translates to: CRALAFHASVISVIGSNSHRLQL*RKRYNT
Trigger: AGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATG...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp ATCAATTTGGAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGACATCATCCCACTGGTaGCTGGAAAACTGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: INLEPVSVLVGVGLWLSMTSSHW*LENWVA
Trigger: TGCAACCCAGTTTTCCAGCCACCAGTGGGATGATGT...CATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp CTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAGTGCCAAGCCCCGCATaGCCAGGAAGCACAACCACT +
Preference number: 2 (lower is better)
Translates to: LLMHISPGPFICTRCSWKVPSPA*PGSTTT
Trigger: AGTGGTTGTGCTTCCTGGCCATGCGGGGCTTGGCAC...TTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR GCA 90 bp CAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCGGCTTTGGCTTTCCATaGCAGTGTCATCAGTGTCAT +
Preference number: 2 (lower is better)
Translates to: QCHQCHRLQLWRKRYNTFGFGFP*QCHQCH
Trigger: ATGACACTGATGACACTGGCATGGAAAGCCAAAGCC...GAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR GCA 90 bp GTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCGGCTTTGGCTTTCCATaGCAGTGTCATCAGTGTCAT +
Preference number: 2 (lower is better)
Translates to: VISVIGSNSGGRGITLSTGFGFP*QCHQCH
Trigger: ATGACACTGATGACACTGGCATGGAAAGCCAAAGCC...GGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR GCA 90 bp GAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCAAGAACAAAGAATGGGTaGTCAGGAGACAATAAAGGT +
Preference number: 2 (lower is better)
Translates to: EPVSVLVGVGLWLSMPVSRTKNG*SGDNKG
Trigger: ACCTTTATTGTCTCCTGAGCACCCATTCTTTGTTCT...TGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCCCATCATCCCACTGGTaGCTGGAAAACTGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLPSSHW*LENWVA
Trigger: TGCAACCCAGTTTTCCAGCCACCAGTGGGATGATGG...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR CCA 90 bp GCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTCATAGGCTCCAACTCTaGAGGAAGAGGTATAACACT +
Preference number: 2 (lower is better)
Translates to: ASVISVIGSNSGGRGITLHRLQL*RKRYNT
Trigger: AGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATG...AAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp CATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATGTTGGTGTAGGGCTTTaGCTTTCCATGCCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: HQCHRLQLWRKRYNTFYHVGVGL*LSMPVS
Trigger: TGACACTGGCATGGAAAGCCAAAGCCCTACACCAAC...ATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp CAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCAGTAAGTGTGCTGGTTaGTGTAGGGCTTTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: QCHQCHRLQLWRKRYNTFSKCAG*CRALAF
Trigger: GAAAGCCAAAGCCCTACACCAACCAGCACACTTACT...GAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp TACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCGAAAATGTTGCAGAGTaGATGACGAGCCAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: YRGSYSQRNGGLAFKITLENVAE*MTSQAG
Trigger: CCCAGCTTGGCTCGTCATCCACTCTGCAACATTTTC...GAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR CCA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATAGGCCATCATCCCACTaGTGGCTGGAAAACTGGGTT +
Preference number: 2 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNRPSSH*WLENWV
Trigger: AACCCAGTTTTCCAGCCACCAGTGGGATGATGGCCT...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CAA 90 bp GGTCAGAGCATCTCTGAAGAATGTATTAGTCAGATCTTGCTTAATTaGAAGAGAGCTCAACAGGGTGAGGCAGCCAGACTGGGTTATGGA +
Preference number: 2 (lower is better)
Translates to: GQSISEECISQILLN*KRAQQGEAARLGYG
Trigger: TCCATAACCCAGTCTGGCTGCCTCACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCTGACTAATACATTCTTCAGAGATGCTCTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
3UTR-3UTR TCA 90 bp GTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGACTGCTTGTCTGCTGGTaGCACTCACATCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: VLLFVLVAPGKTEITGYRLLVCW*HSHPGK
Trigger: CTTCCCAGGATGTGAGTGTCACCAGCAGACAAGCAG...TCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR TCA 90 bp TGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAAACCAGTTGTGTTTCTaGAAGAACAAAGAATGGGTG +
Preference number: 2 (lower is better)
Translates to: CAGWCRALAFHASVISVINQLCF*KNKEWV
Trigger: CACCCATTCTTTGTTCTTTCAGAAACACAACTGGTT...TATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CCA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCGAGATGAGGGAAGGATaGACTAGAAGCAAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTEMREG*TRSKLG
Trigger: ACCCAGCTTGCTTCTAGTCCATCCTTCCCTCATCTC...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR CCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTACTGGTCTTGAACTCCTaGCATCAAGCAATCCACCCG +
Preference number: 2 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLLVLNS*HQAIHP
Trigger: CGGGTGGATTGCTTGATGCCAGGAGTTCAAGACCAG...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR TCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCCTTTCCAGAAGGTTTTaGACTGACTGCCCAGAACCA +
Preference number: 2 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLLSRRF*TDCPEP
Trigger: TGGTTCTGGGCAGTCAGTTCAAAACCTTCTGGAAAG...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR GCA 90 bp GCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTAGAACAAAGAATGGGTaGTCAGGAGACAATAAAGGT +
Preference number: 2 (lower is better)
Translates to: ASVISVIGSNSGGRGITLRTKNG*SGDNKG
Trigger: ACCTTTATTGTCTCCTGAGCACCCATTCTTTGTTCT...AAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
3UTR CAA 90 bp AATGAAAACGGTCAGAGCATCTCTGAAGAATGTATTAGTCAGATCTaGCTTAATTTGAAGAGAGCTCAACAGGGTGAGGCAGCCAGACTG +
Preference number: 2 (lower is better)
Translates to: NENGQSISEECISQI*LNLKRAQQGEAARL
Trigger: CAGTCTGGCTGCCTCACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCTGACTAATACATTCTTCAGAGATGCTCTGACCGTTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
3UTR-3UTR TCA 90 bp TACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCAAGTTAAAGCACAAGTaGACCCTAAAGACCAGGAGA +
Preference number: 2 (lower is better)
Translates to: YRGSYSQRNGGLAFKITLKLKHK*TLKTRR
Trigger: TCTCCTGGTCTTTAGGGTTCACTTGTGCTTTAACTT...GAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR TCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCAGTCAGCTTGTCCTTTaGAGCCAGGCATTGAGTTTT +
Preference number: 2 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLSQLVL*SQALSF
Trigger: AAAACTCAATGCCTGGCTTCAAAGGACAAGCTGACT...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR TCA 90 bp CTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAATGACTCAGGCTGAATaGACAGATGGAGGGATGCCA +
Preference number: 2 (lower is better)
Translates to: LLMHISPGPFICTRCSWKMTQAE*TDGGMP
Trigger: TGGCATCCCTCCATCTGTTCATTCAGCCTGAGTCAT...TTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR CCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTACTCCATCAGAGCTCTTaGGTAACCAGGTGCATTGTT +
Preference number: 2 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLLHQSS*VTRCIV
Trigger: AACAATGCACCTGGTTACCCAAGAGCTCTGATGGAG...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR TCA 90 bp CTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAATAATCTCAGAATCTTaGTGGAGCCCCTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LLMHISPGPFICTRCSWKIISES*WSPCVC
Trigger: GCACACACAGGGGCTCCATCAAGATTCTGAGATTAT...TTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR-3UTR TCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTATTCTTTGCTCGTCCATaGGAAGGAACTTCTCATCCA +
Preference number: 2 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLFFARP*EGTSHP
Trigger: TGGATGAGAAGTTCCTTCTCATGGACGAGCAAAGAA...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR TCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAGCATGCAATGCTGTTTaGCAGCATTTACCCACAGTA +
Preference number: 2 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLACNAV*QHLPTV
Trigger: TACTGTGGGTAAATGCTGTCAAACAGCATTGCATGC...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR TCA 90 bp TCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGTGCTCCTGGAAAAACTaGGATTACAGGATACAGAGG +
Preference number: 2 (lower is better)
Translates to: SFYLYSLLLEKLRLQDTECSWKN*DYRIQR
Trigger: CCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCA...CTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR-3UTR GCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCACTTCAAATTTTCTCCTaGAGCTTCCTCACCTCTCAC +
Preference number: 2 (lower is better)
Translates to: SQALSFSNYESPRWHLFPLQIFS*SFLTSH
Trigger: GTGAGAGGTGAGGAAGCTGCAGGAGAAAATTTGAAG...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR CCA 90 bp ATTTTAGTGGCAAACAAGTCCAGGGATAATTCTAGCTTCAGTTATGACAGTATTTCATCATCCCACTGGTaGCTGGAAAACTGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: ILVANKSRDNSSFSYDSISSSHW*LENWVA
Trigger: TGCAACCCAGTTTTCCAGCCACCAGTGGGATGATGA...AATACTGTCATAACTGAAGCTAGAATTATCCCTGGACTTGTTTGCCACTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415076.6
3UTR CAA 90 bp GCACTGTTCTCAATATTCCACACATCTCACAATGTTCAACAGCTCTaGTGTTGTGAGATTCAATTCTCACCTCATACACAAGCACTAACA +
Preference number: 2 (lower is better)
Translates to: ALFSIFHTSHNVQQL*CCEIQFSPHTQALT
Trigger: TGTTAGTGCTTGTGTATGAGGTGAGAATTGAATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTGGAATATTGAGAACAGTGC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
3UTR-3UTR TCA 90 bp TCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGAGATCTTGCTTAATTTaGAGAGAGCTCAACAGGGTG +
Preference number: 2 (lower is better)
Translates to: SFYLYSLLLEKLRLQDTERSCLI*RELNRV
Trigger: CACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCT...CTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR GCA 90 bp TTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGGAATTTATTTTCTGCCCCTaGCAGAGTTCCTTGCTCATG +
Preference number: 2 (lower is better)
Translates to: FYLYSLLLEKLRLQDTEEFIFCP*QSSLLM
Trigger: CATGAGCAAGGAACTCTGGCAGGGGCAGAAAATAAA...TTCCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR-3UTR CCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAGTCCTCCATGAGGATTaGAATCTATTTCTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLVLHED*NLFLPN
Trigger: ATTTGGAAGAAATAGATTCCAATCCTCATGGAGGAC...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CAA 90 bp ATAATTCTAGCTTCAGTTATGACAGTATTCAGGGTTCAAAAACTGTaGCTAGTACTCAGTTTTTCTCCAGCATTCAGCTCTGCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: IILASVMTVFRVQKL*LVLSFSPAFSSAFF
Trigger: AAAGAAGGCAGAGCTGAATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGTCATAACTGAAGCTAGAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
3UTR-3UTR CCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAGTACTTTTATGGAGATaGCTTCTTTACTTACATCTC +
Preference number: 2 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLVLLWR*LLYLHL
Trigger: GAGATGTAAGTAAAGAAGCCATCTCCATAAAAGTAC...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR CCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTACACGTTGTACTTTTATaGAGATGGCTTCTTTACTTA +
Preference number: 2 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLHVVLL*RWLLYL
Trigger: TAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTG...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR TCA 90 bp ATTTTAGTGGCAAACAAGTCCAGGGATAATTCTAGCTTCAGTTATGACAGTATTAACCAGTTGTGTTTCTaGAAGAACAAAGAATGGGTG +
Preference number: 2 (lower is better)
Translates to: ILVANKSRDNSSFSYDSINQLCF*KNKEWV
Trigger: CACCCATTCTTTGTTCTTTCAGAAACACAACTGGTT...AATACTGTCATAACTGAAGCTAGAATTATCCCTGGACTTGTTTGCCACTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446330.6
3UTR CAA 90 bp TTTTCTGTCTTTAGTTTTCAGAAGTCTGTCCTATCATGGACTTCTTaGGGTTTCACTCAGCTTCTTAAATACAGGCATAACTCAGAAATA +
Preference number: 2 (lower is better)
Translates to: FSVFSFQKSVLSWTS*GFTQLLKYRHNSEI
Trigger: TATTTCTGAGTTATGCCTGTATTTAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAACTAAAGACAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CCA 72 bp GACAGACACAGCCCAGACTGTGTGCCAAGCCCCGCATaGCCAGGAAGCACAACCACTTTGTCTCAGGCCAAC +
Preference number: 3 (lower is better)
Translates to: DRHSPDCVPSPA*PGSTTTLSQAN
Trigger: GTTGGCCTGAGACAAAGTGGTTGTGCTTCCTGGCCATGCGGGGCTTGGCACACAGTCTGGGCTGTGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR TCA 72 bp CTCATTTGCTTCCTTTCCAAATGCCAGGGTTGGTTCTaGAGCCAAACTGAGTGCCCTCCTGAGGGTGCCCTC +
Preference number: 3 (lower is better)
Translates to: LICFLSKCQGWF*SQTECPPEGAL
Trigger: GAGGGCACCCTCAGGAGGGCACTCAGTTTGGCTTCAGAACCAACCCTGGCATTTGGAAAGGAAGCAAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR GCA 72 bp GAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTaGTTTGCTGGGCTTCTTATGCATATTAGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: EPLCVHWTESPS*FAGLLMHISPG
Trigger: ACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR CCA 72 bp GAAGAGGAGGCCAAATTATTCAGTCTGAATCATTCCTaGGAACGCTCATCTCAGGCCCCCTCCAGACTCTGC +
Preference number: 3 (lower is better)
Translates to: EEEAKLFSLNHS*ERSSQAPSRLC
Trigger: GCAGAGTCTGGAGGGGGCCTGAGATGAGCGTTCCCAGGAATGATTCAGACTGAATAATTTGGCCTCCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR TCA 72 bp GAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATaGGACACGAGAGAAAGACAGAGTGGGAAACAATGC +
Preference number: 3 (lower is better)
Translates to: EVPRVLQLPTPA*DTRERQSGKQC
Trigger: GCATTGTTTCCCACTCTGTCTTTCTCTCGTGTCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
3UTR TCA 72 bp TTTGGCAGAGGGAAGAGGAGGCCAAATTATTCAGTCTaGATCATTCCTGGGAACGCTCATCTCAGGCCCCCT +
Preference number: 3 (lower is better)
Translates to: FGRGKRRPNYSV*IIPGNAHLRPP
Trigger: AGGGGGCCTGAGATGAGCGTTCCCAGGAATGATTCAGACTGAATAATTTGGCCTCCTCTTCCCTCTGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR CCA 72 bp AATCTCAGAATCTTGATGGAGCCCCTGTGTGTGCACTaGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: NLRILMEPLCVH*TESPSCFAGLL
Trigger: AAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCTGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR-3UTR CAA 90 bp TATCAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCGGTTGGTGTAGGGCTTaGGCTTTCCATGCCAGTGTC +
Preference number: 3 (lower is better)
Translates to: YQLCSFQVIRVPAETRVSGWCRA*AFHASV
Trigger: GACACTGGCATGGAAAGCCAAAGCCCTACACCAACC...GCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACATAACTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
3UTR-3UTR CAA 90 bp CAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAGGTTGGTGTAGGGCTTaGGCTTTCCATGCCAGTGTC +
Preference number: 3 (lower is better)
Translates to: QLCSFQVIRVPAETRVSKGWCRA*AFHASV
Trigger: GACACTGGCATGGAAAGCCAAAGCCCTACACCAACC...TTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACATAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
3UTR-3UTR CAA 90 bp GTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATCCTAACCGGTTGGTGTAGGGCTTaGGCTTTCCATGCCAGTGTC +
Preference number: 3 (lower is better)
Translates to: VIGSNSGGRGITLSTILTGWCRA*AFHASV
Trigger: GACACTGGCATGGAAAGCCAAAGCCCTACACCAACC...GGTTAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CAA 90 bp CTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAACCTGCCCCTGTCCCTTaGGCAGAGGGAAGAGGAGGC +
Preference number: 3 (lower is better)
Translates to: LLMHISPGPFICTRCSWKPAPVP*AEGRGG
Trigger: GCCTCCTCTTCCCTCTGCCAAAGGGACAGGGGCAGG...TTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR TCA 72 bp AAATGCACCACCCTTGGGATGAGGAAACTCTGGTTATaGCTCAGGCTGAATGAACAGATGGAGGGATGCCAG +
Preference number: 3 (lower is better)
Translates to: KCTTLGMRKLWL*LRLNEQMEGCQ
Trigger: CTGGCATCCCTCCATCTGTTCATTCAGCCTGAGTCATAACCAGAGTTTCCTCATCCCAAGGGTGGTGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR CCA 72 bp GTGGCAATGGCTGGTCCTGTAAGCCTGCGAATGGGCTaGAGCTGTCACTGGCTCCTTTCATATTTTGAAAAA +
Preference number: 3 (lower is better)
Translates to: VAMAGPVSLRMG*SCHWLLSYFEK
Trigger: TTTTTCAAAATATGAAAGGAGCCAGTGACAGCTCCAGCCCATTCGCAGGCTTACAGGACCAGCCATTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR-3UTR CAA 90 bp ATGCTGGACGCACAGCCACAGCTTTCCCCACCTGTGAACCATCTGGTATTCCCCTTTTATTTGTACTCGTaGCTCCTGGAAAAACTGAGA +
Preference number: 3 (lower is better)
Translates to: MLDAQPQLSPPVNHLVFPFYLYS*LLEKLR
Trigger: TCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAA...GGGGAATACCAGATGGTTCACAGGTGGGGAAAGCTGTGGCTGTGCGTCCAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR CCA 72 bp AGCGTAGATCAATTTGGAACCAGTAAGTGTGCTGGTTaGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATC +
Preference number: 3 (lower is better)
Translates to: SVDQFGTSKCAG*CRALAFHASVI
Trigger: GATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGATCTACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CAA 90 bp ACTGGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATTAGTCCTGTATAATCTCAGAATCTaGATGGAGCCCCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: TGLKAHRALLGFLCILVLYNLRI*MEPLCV
Trigger: CACACACAGGGGCTCCATCAAGATTCTGAGATTATA...CAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR TCA 72 bp AATGGGCTGGAGCTGTCACTGGCTCCTTTCATATTTTaGAAAATGCACCACCCTTGGGATGAGGAAACTCTG +
Preference number: 3 (lower is better)
Translates to: NGLELSLAPFIF*KMHHPWDEETL
Trigger: CAGAGTTTCCTCATCCCAAGGGTGGTGCATTTTTCAAAATATGAAAGGAGCCAGTGACAGCTCCAGCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR CCA 72 bp CCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTaGAGGAAGAGGTATAACACTTTCTACCATCCTAAC +
Preference number: 3 (lower is better)
Translates to: PCQCHQCHRLQL*RKRYNTFYHPN
Trigger: GTTAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CAA 90 bp TTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGGAATTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 3 (lower is better)
Translates to: FYLYSLLLEKLRLQDTEELLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...TTCCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR GCA 72 bp CTTCTGTGTAACTTCTACAGCTTCTCCATCAGCACTTaGTGCGTCACGTTGTACTTTTATGGAGATGGCTTC +
Preference number: 3 (lower is better)
Translates to: LLCNFYSFSIST*CVTLYFYGDGF
Trigger: GAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAGAAGCTGTAGAAGTTACACAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR CAA 90 bp TACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCTCCTGGTCCTTTTATTaGTACTCGTTGCTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: YRGSYSQRNGGLAFKITLSWSFY*YSLLLE
Trigger: TTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGA...GAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR-3UTR CAA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCGAGTCAGCTTGTCCTTaGAAGCCAGGCATTGAGTTT +
Preference number: 3 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLESACP*KPGIEF
Trigger: AAACTCAATGCCTGGCTTCAAAGGACAAGCTGACTC...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR CAA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTATCTCCATCAGAGCTCTaGGGTAACCAGGTGCATTGT +
Preference number: 3 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLSPSEL*GNQVHC
Trigger: ACAATGCACCTGGTTACCCAAGAGCTCTGATGGAGA...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR GCA 72 bp GGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATaGATATTAGTCCTGGTCCTTTTATTTGTACTCGTT +
Preference number: 3 (lower is better)
Translates to: GLKAHRALLGFL*ILVLVLLFVLV
Trigger: AACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
3UTR GCA 72 bp CTGTGTAACTTCTACAGCTTCTCCATCAGCACTTGCTaGGTCACGTTGTACTTTTATGGAGATGGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: LCNFYSFSISTC*VTLYFYGDGFF
Trigger: AAAGAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAGAAGCTGTAGAAGTTACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR TCA 72 bp CTGACAAGAGTCAGCTTGTCCTTTGAAGCCAGGCATTaGGTTTTTCTAACTATGAAAGTCCTAGATGGCATC +
Preference number: 3 (lower is better)
Translates to: LTRVSLSFEARH*VFLTMKVLDGI
Trigger: GATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCTTCAAAGGACAAGCTGACTCTTGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CCA 72 bp CTCCATCAGCACTTGCTGCGTCACGTTGTACTTTTATaGAGATGGCTTCTTTACTTACATCTCATGAACACT +
Preference number: 3 (lower is better)
Translates to: LHQHLLRHVVLL*RWLLYLHLMNT
Trigger: AGTGTTCATGAGATGTAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CCA 72 bp ACTAAAAGAACTTGTCTCACTTCCTTCTGGCCTCCATaGTTTCCAGAGAGAAATCCACTGTCATCTGAGTTA +
Preference number: 3 (lower is better)
Translates to: TKRTCLTSFWPP*FPERNPLSSEL
Trigger: TAACTCAGATGACAGTGGATTTCTCTCTGGAAACCATGGAGGCCAGAAGGAAGTGAGACAAGTTCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR TCA 72 bp ACACTTTCTACCATCCTAACCTTTACGTGGACTGAGTaGAGAAGGGATGGATTCTCAAAACCAGTTGTGTTT +
Preference number: 3 (lower is better)
Translates to: TLSTILTFTWTE*RRDGFSKPVVF
Trigger: AAACACAACTGGTTTTGAGAATCCATCCCTTCTTCACTCAGTCCACGTAAAGGTTAGGATGGTAGAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR TCA 72 bp TCTAGAATGGTGAATCCTTTCCAGAAGGTTTTGAACTaGCTGCCCAGAACCATCAGAGAAACCACAAAATGT +
Preference number: 3 (lower is better)
Translates to: SRMVNPFQKVLN*LPRTIRETTKC
Trigger: ACATTTTGTGGTTTCTCTGATGGTTCTGGGCAGTCAGTTCAAAACCTTCTGGAAAGGATTCACCATTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR TCA 72 bp CCACACATCTCACAATGTTCAACAGCTCTTGTGTTGTaGGATTCAATTCTCACCTCATACACAAGCACTAAC +
Preference number: 3 (lower is better)
Translates to: PHISQCSTALVL*DSILTSYTSTN
Trigger: GTTAGTGCTTGTGTATGAGGTGAGAATTGAATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
3UTR-3UTR CAA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTACCACTTCTAGTTCTCTaGCTATTTTCAGCCCATCTA +
Preference number: 3 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLPLLVL*LFSAHL
Trigger: TAGATGGGCTGAAAATAGCAAGAGAACTAGAAGTGG...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR-3UTR CAA 90 bp GACAGTATTCAGGGTTCAAAAACTGTTGCTAGTACTCAGTTTTTCTCCAGCATTGATTCTCAAAACCAGTaGTGTTTCATCATCCCACTG +
Preference number: 3 (lower is better)
Translates to: DSIQGSKTVASTQFFSSIDSQNQ*CFIIPL
Trigger: CAGTGGGATGATGAAACACAACTGGTTTTGAGAATC...AATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415076.6
3UTR TCA 72 bp TATAACACTTTCTACCATCCTAACCTTTACGTGGACTaGGTGAAGAAGGGATGGATTCTCAAAACCAGTTGT +
Preference number: 3 (lower is better)
Translates to: YNTFYHPNLYVD*VKKGWILKTSC
Trigger: ACAACTGGTTTTGAGAATCCATCCCTTCTTCACTCAGTCCACGTAAAGGTTAGGATGGTAGAAAGTGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR-3UTR CAA 90 bp GTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGATTTACAAATTCAAATTaGAGTGCAGTGGGGCTGGAA +
Preference number: 3 (lower is better)
Translates to: VLLFVLVAPGKTEITGYRFTNSN*SAVGLE
Trigger: TTCCAGCCCCACTGCACTCAAATTTGAATTTGTAAA...TCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418140.5
3UTR TCA 72 bp ATTCCATTTCAAGAAATCACCTTCTTTGCTCGTCCATaGGAAGGAACTTCTCATCCATACAAGTTTGATCCT +
Preference number: 3 (lower is better)
Translates to: IPFQEITFFARP*EGTSHPYKFDP
Trigger: AGGATCAAACTTGTATGGATGAGAAGTTCCTTCTCATGGACGAGCAAAGAAGGTGATTTCTTGAAATGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CCA 72 bp TTAGTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTaGGTTTCACTCAGCTTCTTAAATACAGGCATAACT +
Preference number: 3 (lower is better)
Translates to: LVFRSLSYHGLL*VSLSFLNTGIT
Trigger: AGTTATGCCTGTATTTAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR TCA 72 bp TATCAACCGAGAATGTTTTTATTACCCCATCAATCCTaGAGGATCATTTCACCAAATAGGAATTTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: YQPRMFLLPHQS*RIISPNRNLEL
Trigger: CAACTCCAAATTCCTATTTGGTGAAATGATCCTTCAGGATTGATGGGGTAATAAAAACATTCTCGGTTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CCA 72 bp AGAACTTCAAAATTAGGAGTCAATCCTCTCAAACCCTaGCCACAGCTAAGTTTATGGAATATTCTAAATCTT +
Preference number: 3 (lower is better)
Translates to: RTSKLGVNPLKP*PQLSLWNILNL
Trigger: AAGATTTAGAATATTCCATAAACTTAGCTGTGGCCAGGGTTTGAGAGGATTGACTCCTAATTTTGAAGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR GCA 90 bp CAAAGCCCCCGGCATAGAACACACCGTGGAAAAGGATCCTTGCTCCCAGAGGCACATGTCCAGGACCCATaGTGTGGGGGCCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: QSPRHRTHRGKGSLLPEAHVQDP*CGGPAT
Trigger: GGTGGCAGGGCCCCCACAGCATGGGTCCTGGACATG...TGCCTCTGGGAGCAAGGATCCTTTTCCACGGTGTGTTCTATGCCGGGGGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR TCA 90 bp CTGGAGCCGAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTGCCCAGGTCGTGGCAAACATCCTGTaGGCAACAGAAGCACCACGC +
Preference number: 4 (lower is better)
Translates to: LEPRFNHSTQAVGCSAQVVANIL*ATEAPR
Trigger: GCGTGGTGCTTCTGTTGCTCACAGGATGTTTGCCAC...GACCTGGGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTCGGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000451651.5
CDS-3UTR GCA 90 bp AGCTGGAGCCGAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTGCCCAGGCCTGCCAGAGTTCCTTaGTCATGGTCCCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SWSRDSTIQPRQSAAVPRPARVP*SWSLLH
Trigger: ATGGAGGAGGGACCATGAGCAAGGAACTCTGGCAGG...CCTGGGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTCGGCTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR TCA 90 bp GCAGTGGGGCTGGAAGCGGCATCTGTCGGGATTTTGCCATCGTGGTCTCTGCTTGTGTGTGCACTGGACTaGAAGCCCATCGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AVGLEAASVGILPSWSLLVCALD*KPIVLC
Trigger: GCAAAGCACGATGGGCTTTCAGTCCAGTGCACACAC...AAGCAGAGACCACGATGGCAAAATCCCGACAGATGCCGCTTCCAGCCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR GCA 90 bp GGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCGCCCAGAGCTTCCTGTaGCTCGGGATGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GWCRALAFHASVISVIGSAQSFL*LGMALQ
Trigger: CTGCAGAGCCATCCCGAGGCACAGGAAGCTCTGGGC...GGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
3UTR CAA 72 bp AGCCCCCGGCATAGAACACACCGTGGAAAAGGATCCTaGCTCCCAGAGGCATTGACCGCCTGCTTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SPRHRTHRGKGS*LPEALTACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACGGTGTGTTCTATGCCGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp AAGAGAGCTCAACAGGGTGAGGCAGCCAGACTGGGTTATGGAGAGGTTCCCAGACCCCTGTGTGTGCACTaGACTGAAAGCCCATCGTGC +
Preference number: 4 (lower is better)
Translates to: KRAQQGEAARLGYGEVPRPLCVH*TESPSC
Trigger: GCACGATGGGCTTTCAGTCCAGTGCACACACAGGGG...TCTGGGAACCTCTCCATAACCCAGTCTGGCTGCCTCACCCTGTTGAGCTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp ACAGGAAGCTTATCCTTTGTGGCAATGGCTGGTCCTGTAAGCCTGCGAATGGGCGTGCCCTCTCGAGAGTaGCCCATGTCCAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: TGSLSFVAMAGPVSLRMGVPSRE*PMSRTH
Trigger: ATGGGTCCTGGACATGGGCCACTCTCGAGAGGGCAC...GCCCATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAGGATAAGCTTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR TCA 90 bp CAGACTGTGTGCCAAGCCCCGCATGGCCAGGAAGCACAACCACTTTGTCTCAGGACGCTACAAAGAGCATaGCGAGTTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QTVCQAPHGQEAQPLCLRTLQRA*RVLPGL
Trigger: CAAGCCTGGAAGAACTCGTCATGCTCTTTGTAGCGT...CCTGAGACAAAGTGGTTGTGCTTCCTGGCCATGCGGGGCTTGGCACACAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR TCA 90 bp AGCCAGACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCAGGCAAGTTGTCCTGTaGGCAACAGAAGCACCACGC +
Preference number: 4 (lower is better)
Translates to: SQTGLWRGSQSVTASNASRQVVL*ATEAPR
Trigger: GCGTGGTGCTTCTGTTGCTCACAGGACAACTTGCCT...GCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420441.1
CDS-3UTR TCA 90 bp AAGAGCTGGAGCCGAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTGCCCAGAGATTCTCTCGAGTaGCTCGTGTGGCAAACATCC +
Preference number: 4 (lower is better)
Translates to: KSWSRDSTIQPRQSAAVPRDSLE*LVWQTS
Trigger: GGATGTTTGCCACACGAGTCACTCGAGAGAATCTCT...GGGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTCGGCTCCAGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000451651.5
CDS-3UTR TCA 90 bp CAGACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGGAGAGCTCAACAGGGTaGGGCAGCCAGACTGGGTTA +
Preference number: 4 (lower is better)
Translates to: QTGLWRGSQSVTASNASMESSTG*GSQTGL
Trigger: TAACCCAGTCTGGCTGCCTCACCCTGTTGAGCTCTC...CATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR GCA 90 bp AAGAGAGCTCAACAGGGTGAGGCAGCCAGACTGGGTTATGGAGAGGTTCCCAGAGGATTCCCAGTTTTGTaGCAAGGGGATTTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KRAQQGEAARLGYGEVPRGFPVL*QGDLPG
Trigger: GCCGGGCAAATCCCCTTGGCACAAAACTGGGAATCC...TCTGGGAACCTCTCCATAACCCAGTCTGGCTGCCTCACCCTGTTGAGCTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp AGTCTGACAATGCTGGACGCACAGCCACAGCTTTCCCCACCTGTGAACCATCTGGATGACGAGCCAAGCTaGGTGGGGATAAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SLTMLDAQPQLSPPVNHLDDEPS*VGIKEP
Trigger: AGGCTCCTTTATCCCCACCCAGCTTGGCTCGTCATC...CAGATGGTTCACAGGTGGGGAAAGCTGTGGCTGTGCGTCCAGCATTGTCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR TCA 90 bp AGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGCTTTGAGAGCTCAACAGGGTaGGGCAGCCAGACTGGGTTA +
Preference number: 4 (lower is better)
Translates to: RILMEPLCVHWTESPSCFESSTG*GSQTGL
Trigger: TAACCCAGTCTGGCTGCCTCACCCTGTTGAGCTCTC...AAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR TCA 90 bp CTCAACAGGGTGAGGCAGCCAGACTGGGTTATGGAGAGGTTCCCAGAGTGTTACCTCAAGTATTTCCTCTaGTGGAGGAGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNRVRQPDWVMERFPECYLKYFL*WRSRSR
Trigger: CCTGCTCCTGCTCCTCCATCAGAGGAAATACTTGAG...GTAACACTCTGGGAACCTCTCCATAACCCAGTCTGGCTGCCTCACCCTGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR TCA 90 bp CGAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTGCCCAGGTCTCACCGAATAATCTCAGAATCTTaGTGGAGCCCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: RDSTIQPRQSAAVPRSHRIISES*WSPCVC
Trigger: GCACACACAGGGGCTCCATCAAGATTCTGAGATTAT...TCGGTGAGACCTGGGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CCA 90 bp CTCAGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGCACCAACTCTGCAGGATaGTGCAGAAAGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRILMEPLCVHWTESPSCTNSAG*CRKAGE
Trigger: CTCTCCAGCCTTTCTGCACCATCCTGCAGAGTTGGT...GCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR TCA 90 bp TCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAACAAGGAAAGGGGCCACCTCTGGATaGGTGGACGTAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SFQVIRVPAETRVSKTRKGATSG*VDVEKA
Trigger: GGCCTTCTCTACGTCCACTCATCCAGAGGTGGCCCC...TTTCCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR TCA 90 bp ATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGACACGAGAGCTTCCAACGCCAGCATaGGACACGAGAGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: MERFPECYSFQRQHETRELPTPA*DTRERQ
Trigger: CTGTCTTTCTCTCGTGTCTCATGCTGGCGTTGGAAG...CTCTCGTGTCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR TCA 90 bp AATCTCAGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGCTGCTTGTCTGCTGGTaGCACTCACATCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NLRILMEPLCVHWTESPSLLVCW*HSHPGK
Trigger: CTTCCCAGGATGTGAGTGTCACCAGCAGACAAGCAG...CGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCTGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR GCA 90 bp GGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCGAGGCATTGACCGCCTaGTTCCTGCATACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GWCRALAFHASVISVIGSEALTA*FLHTFA
Trigger: GGCAAAAGTATGCAGGAAGCAGGCGGTCAATGCCTC...GGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR GCA 90 bp TCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAACAAGGAAAGCCCAGAGCTTCCTGTaGCTCGGGATGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFQVIRVPAETRVSKTRKAQSFL*LGMALQ
Trigger: CTGCAGAGCCATCCCGAGGCACAGGAAGCTCTGGGC...TTTCCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR GCA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATAAATGCCCGCGGTCCTaGGCGCCAGCGGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNKCPRS*APAGSS
Trigger: ACTGCTCCCCGCTGGCGCGCAGGACCGCGGGCATTT...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR GCA 90 bp AATCTCAGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGTGCCAAGGGGATTTaGCCGGCTTGGACCCCTAAA +
Preference number: 4 (lower is better)
Translates to: NLRILMEPLCVHWTESPSCAKGI*PAWTPK
Trigger: TTTAGGGGTCCAAGCCGGGCAAATCCCCTTGGCACA...CGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCTGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp AGCCAGACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCAGCCAGACTGGGTTATaGAGAGGTTCCCAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SQTGLWRGSQSVTASNASSQTGL*RGSQSV
Trigger: AACACTCTGGGAACCTCTCCATAACCCAGTCTGGCT...GCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR TCA 90 bp GGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCACGCTACAAAGAGCATaGCGAGTTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GWCRALAFHASVISVIGSTLQRA*RVLPGL
Trigger: CAAGCCTGGAAGAACTCGTCATGCTCTTTGTAGCGT...GGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR TCA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTAGGCAAGTTGTCCTGTaGGCAACAGAAGCACCACGC +
Preference number: 4 (lower is better)
Translates to: CRALAFHASVISVIGSNSRQVVL*ATEAPR
Trigger: GCGTGGTGCTTCTGTTGCTCACAGGACAACTTGCCT...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR TCA 90 bp AGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATCCTAGGGGCCACCTCTGGATaGGTGGACGTAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SVIGSNSGGRGITLSTILGATSG*VDVEKA
Trigger: GGCCTTCTCTACGTCCACTCATCCAGAGGTGGCCCC...TAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGTGGCAAACATCCTGTaGGCAACAGAAGCACCACGC +
Preference number: 4 (lower is better)
Translates to: CRALAFHASVISVIGSNSVANIL*ATEAPR
Trigger: GCGTGGTGCTTCTGTTGCTCACAGGATGTTTGCCAC...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446564.5
CDS-3UTR TCA 90 bp ACAGGAAGCTTATCCTTTGTGGCAATGGCTGGTCCTGTAAGCCTGCGAATGGGCAGAGATTCTCTCGAGTaGCTCGTGTGGCAAACATCC +
Preference number: 4 (lower is better)
Translates to: TGSLSFVAMAGPVSLRMGRDSLE*LVWQTS
Trigger: GGATGTTTGCCACACGAGTCACTCGAGAGAATCTCT...GCCCATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAGGATAAGCTTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp CATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATGCCCAGAGCTTCCTGTaGCTCGGGATGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HQCHRLQLWRKRYNTFYHAQSFL*LGMALQ
Trigger: CTGCAGAGCCATCCCGAGGCACAGGAAGCTCTGGGC...ATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR GCA 90 bp GCTGGACGCACAGCCACAGCTTTCCCCACCTGTGAACCATCTGGTATTCCCCTTAAGCCCATCGTGCTTTaGTGGGCTTCTTATGCATAT +
Preference number: 4 (lower is better)
Translates to: AGRTATAFPTCEPSGIPLKPIVL*WASYAY
Trigger: ATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTT...AAGGGGAATACCAGATGGTTCACAGGTGGGGAAAGCTGTGGCTGTGCGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CCA 90 bp CAGACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAACTCGAGAATACCCTaGCAGGTTCTAGTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QTGLWRGSQSVTASNASMNSRIP*QVLVGN
Trigger: GTTCCCCACTAGAACCTGCCAGGGTATTCTCGAGTT...CATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR CCA 90 bp ACTGGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATTAGTCCTGCCCCTGTGTGTGCACTaGACTGAAAGCCCATCGTGC +
Preference number: 4 (lower is better)
Translates to: TGLKAHRALLGFLCILVLPLCVH*TESPSC
Trigger: GCACGATGGGCTTTCAGTCCAGTGCACACACAGGGG...CAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR TCA 90 bp ATCAATTTGGAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGTCAAGGTGCCACCTCTaGAAGGGGCCACCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: INLEPVSVLVGVGLWLSMSRCHL*KGPPLD
Trigger: ATCCAGAGGTGGCCCCTTTCAGAGGTGGCACCTTGA...CATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp GTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCTCAAGGTGCCACCTCTaGAAGGGGCCACCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VISVIGSNSGGRGITLSTSRCHL*KGPPLD
Trigger: ATCCAGAGGTGGCCCCTTTCAGAGGTGGCACCTTGA...GGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp AGTGGGGCTGGAAGCGGCATCTGTCGGGATTTTGCCATCGTGGTCTCTGCTTTTTGCTCCTGGAAAAACTaGGATTACAGGATACAGAGG +
Preference number: 4 (lower is better)
Translates to: SGAGSGICRDFAIVVSAFCSWKN*DYRIQR
Trigger: CCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCA...AAAAGCAGAGACCACGATGGCAAAATCCCGACAGATGCCGCTTCCAGCCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR TCA 90 bp AGTCAGATCTTGCTTAATTTGAAGAGAGCTCAACAGGGTGAGGCAGCCAGACTGGTGTGTGCACTGGACTaGAAGCCCATCGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SQILLNLKRAQQGEAARLVCALD*KPIVLC
Trigger: GCAAAGCACGATGGGCTTTCAGTCCAGTGCACACAC...CAGTCTGGCTGCCTCACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCGAAAGCACGGGTAAATaGCCGCGGTCCTGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTESTGK*PRSCAP
Trigger: TGGCGCGCAGGACCGCGGGCATTTACCCGTGCTTTC...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR GCA 90 bp CAGCCAGACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGAAGCCCATCGTGCTTTaGTGGGCTTCTTATGCATAT +
Preference number: 4 (lower is better)
Translates to: QPDWVMERFPECYSFQRQKPIVL*WASYAY
Trigger: ATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTT...CTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGTCTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp AGTGGGGCTGGAAGCGGCATCTGTCGGGATTTTGCCATCGTGGTCTCTGCTTTTTTTATTTTCTGCCCCTaGCAGAGTTCCTTGCTCATG +
Preference number: 4 (lower is better)
Translates to: SGAGSGICRDFAIVVSAFFIFCP*QSSLLM
Trigger: CATGAGCAAGGAACTCTGGCAGGGGCAGAAAATAAA...AAAAGCAGAGACCACGATGGCAAAATCCCGACAGATGCCGCTTCCAGCCCCACT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR GCA 90 bp AGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGCTTTGAACAGATGGAGGGATaGCAGCTCGGTAAATACAGC +
Preference number: 4 (lower is better)
Translates to: RILMEPLCVHWTESPSCFEQMEG*QLGKYS
Trigger: GCTGTATTTACCGAGCTGGCATCCCTCCATCTGTTC...AAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp ACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGAGAGTTCTTCCAGGCTTaGGAAAGCACGGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: TGLWRGSQSVTASNASMREFFQA*ESTGKC
Trigger: GCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTC...TCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420441.1
CDS-3UTR CCA 90 bp ACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCGAGTTCTTCCAGGCTTaGGAAAGCACGGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: TSKCAGWCRALAFHASVIEFFQA*ESTGKC
Trigger: GCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTC...GATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp GAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCATCATCCCACTGGTaGCTGGAAAACTGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: EPVSVLVGVGLWLSMPVSSSSHW*LENWVA
Trigger: TGCAACCCAGTTTTCCAGCCACCAGTGGGATGATGA...TGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415076.6
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCGGTCGCCGGGACGTGTaGCTTCTGCTTCTCAGACGC +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLGRRDV*LLLLRR
Trigger: GCGTCTGAGAAGCAGAAGCCACACGTCCCGGCGACC...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp GGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCGTGCCAAGCCCCGCATaGCCAGGAAGCACAACCACT +
Preference number: 4 (lower is better)
Translates to: GYRGSYSQRNGGLAFKITVPSPA*PGSTTT
Trigger: AGTGGTTGTGCTTCCTGGCCATGCGGGGCTTGGCAC...GGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR CAA 72 bp CCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGCTTaGCTGGGCTTCTTATGCATATTAGTCCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PCVCTGLKAHRA*LGFLCILVLVL
Trigger: AAGGACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR TCA 90 bp GAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCTGCTGACCATCCTTaGGCTCTAAAAAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: EPVSVLVGVGLWLSMPVSSADHP*ALKRPR
Trigger: ACGAGGTCTTTTTAGAGCTCAAGGATGGTCAGCAGA...TGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp AGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCTCCTCCTTTATGTTGCAGAGTGGATaGCGAGCCAAGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SYSQRNGGLAFKITLSSFMLQSG*RAKLGG
Trigger: CCCACCCAGCTTGGCTCGTCATCCACTCTGCAACAT...AAAGGAGGAGAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR GCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAGCCCAGAGCTTCCTGTaGCTCGGGATGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLAQSFL*LGMALQ
Trigger: CTGCAGAGCCATCCCGAGGCACAGGAAGCTCTGGGC...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR GCA 90 bp CAGCCAGACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGTTGCTGGGCTTCTTATaGATATTAGTCCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: QPDWVMERFPECYSFQRQLLGFL*ILVLVL
Trigger: AAGGACCAGGACTAATATGCATAAGAAGCCCAGCAA...CTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGTCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp AGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGCTTTCATCTGTCGGGATTTTaGCATCGTGGTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RILMEPLCVHWTESPSCFHLSGF*HRGLCF
Trigger: AAAGCAGAGACCACGATGGCAAAATCCCGACAGATG...AAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR GCA 90 bp GGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCTCCTCCCAACTCCACCAACTCTaGAGGATGGTGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GSYSQRNGGLAFKITLSSQLHQL*RMVQKG
Trigger: GCCTTTCTGCACCATCCTGCAGAGTTGGTGGAGTTG...GGAGGAGAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR GCA 90 bp GTAAACAGGAAGCTTATCCTTTGTGGCAATGGCTGGTCCTGTAAGCCTGCGAATCCGCCCTCCCTCATTTaGTTCCTTTCCAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: VNRKLILCGNGWSCKPANPPSLI*FLSKCQ
Trigger: CTGGCATTTGGAAAGGAAGCAAATGAGGGAGGGCGG...ATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAGGATAAGCTTCCTGTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp GGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCCATAGGCTCCAACTCTaGAGGAAGAGGTATAACACT +
Preference number: 4 (lower is better)
Translates to: GWCRALAFHASVISVIGSHRLQL*RKRYNT
Trigger: AGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATG...GGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp GGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCGGCTGGAGAGGACACTaGAGCCTGTCTGCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GYRGSYSQRNGGLAFKITGWRGH*SLSACL
Trigger: CAGACAAGCAGACAGGCTCCAGTGTCCTCTCCAGCC...GGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CCA 90 bp TGGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATTAGTCCTGGTGGGATTTGCCCGGCTTaGACCCCTAAAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: WTESPSCFAGLLMHISPGGICPA*TPKGKK
Trigger: CTTCTTTCCTTTAGGGGTCCAAGCCGGGCAAATCCC...ACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR CAA 72 bp TTTGGAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTaGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: FGTSKCAGWCRA*AFHASVISVIG
Trigger: GCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp CCCTCCTGTGAAGTTAAAGCACAAGTGAACCCTAAAGACCAGGAGAAGCCCATAACGCTACAAAGAGCATaGCGAGTTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PSCEVKAQVNPKDQEKPITLQRA*RVLPGL
Trigger: CAAGCCTGGAAGAACTCGTCATGCTCTTTGTAGCGT...TATGGGCTTCTCCTGGTCTTTAGGGTTCACTTGTGCTTTAACTTCACAGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR TCA 90 bp GCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTACGCTACAAAGAGCATaGCGAGTTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASVISVIGSNSGGRGITLTLQRA*RVLPGL
Trigger: CAAGCCTGGAAGAACTCGTCATGCTCTTTGTAGCGT...AAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR TCA 90 bp GAAAAACAAAGGACAGTATATCAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGGGGCCACCTCTGGATaGGTGGACGTAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EKQRTVYQLCSFQVIRVPGATSG*VDVEKA
Trigger: GGCCTTCTCTACGTCCACTCATCCAGAGGTGGCCCC...TGGCACCCTGATCACTTGAAAGGAACATAACTGATATACTGTCCTTTGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR TCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAGGGGCCACCTCTGGATaGGTGGACGTAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPGATSG*VDVEKA
Trigger: GGCCTTCTCTACGTCCACTCATCCAGAGGTGGCCCC...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp TGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATATCTGCTGACCATCCTTaGGCTCTAAAAAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: CAGWCRALAFHASVISVISADHP*ALKRPR
Trigger: ACGAGGTCTTTTTAGAGCTCAAGGATGGTCAGCAGA...TATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp ACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAACACAGGAATCTGCTaGCCATCCTTGAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: TSKCAGWCRALAFHASVINTGIC*PSLSSK
Trigger: TTTAGAGCTCAAGGATGGTCAGCAGATTCCTGTGTT...GATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp GGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCGTGGCAAACATCCTGTaGGCAACAGAAGCACCACGC +
Preference number: 4 (lower is better)
Translates to: GYRGSYSQRNGGLAFKITVANIL*ATEAPR
Trigger: GCGTGGTGCTTCTGTTGCTCACAGGATGTTTGCCAC...GGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR TCA 90 bp CAGACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGATCTTGCTTAATTTaGAGAGAGCTCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: QTGLWRGSQSVTASNASMRSCLI*RELNRV
Trigger: CACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCT...CATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR GCA 90 bp ATCAATTTGGAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGGAGGCATTGACCGCCTaGTTCCTGCATACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: INLEPVSVLVGVGLWLSMEALTA*FLHTFA
Trigger: GGCAAAAGTATGCAGGAAGCAGGCGGTCAATGCCTC...CATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGAAGGCCCTCTGATTTaGATCCAGAGACAGGAATCT +
Preference number: 4 (lower is better)
Translates to: CRALAFHASVISVIGSNSEGPLI*IQRQES
Trigger: AGATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTC...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp TATCAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCGAAAGGGGCCACCTCTaGATGAGTGGACGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: YQLCSFQVIRVPAETRVSERGHL*MSGRRE
Trigger: TTCTCTACGTCCACTCATCCAGAGGTGGCCCCTTTC...GCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACATAACTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp GTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATCCTAACCGGACTAGAAGCAAGCTaGGTCTTCTGGGTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VIGSNSGGRGITLSTILTGLEAS*VFWVVS
Trigger: AGAGACGACCCAGAAGACCCAGCTTGCTTCTAGTCC...GGTTAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp CAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCGGACTAGAAGCAAGCTaGGTCTTCTGGGTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: QCHQCHRLQLWRKRYNTFGLEAS*VFWVVS
Trigger: AGAGACGACCCAGAAGACCCAGCTTGCTTCTAGTCC...GAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp GCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTGAGATGAGGGAAGGATaGACTAGAAGCAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASVISVIGSNSGGRGITLEMREG*TRSKLG
Trigger: ACCCAGCTTGCTTCTAGTCCATCCTTCCCTCATCTC...AAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp TTCCAACGCCAGCATGAGACACGAGAGAAAGACAGAGTGGGAAACAATGCAGAAAACTCGAGAATACCCTaGCAGGTTCTAGTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FQRQHETREKDRVGNNAENSRIP*QVLVGN
Trigger: GTTCCCCACTAGAACCTGCCAGGGTATTCTCGAGTT...TTCTGCATTGTTTCCCACTCTGTCTTTCTCTCGTGTCTCATGCTGGCGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR CCA 90 bp TGGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATTAGTCCTGGTAGTCTGAATCATTCCTaGGAACGCTCATCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WTESPSCFAGLLMHISPGSLNHS*ERSSQA
Trigger: GGCCTGAGATGAGCGTTCCCAGGAATGATTCAGACT...ACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CCA 90 bp TTCCAACGCCAGCATGAGACACGAGAGAAAGACAGAGTGGGAAACAATGCAGAACTTTGTGGCAATGGCTaGTCCTGTAAGCCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: FQRQHETREKDRVGNNAELCGNG*SCKPAN
Trigger: ATTCGCAGGCTTACAGGACCAGCCATTGCCACAAAG...TTCTGCATTGTTTCCCACTCTGTCTTTCTCTCGTGTCTCATGCTGGCGTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR TCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTATCAAGGTGCCACCTCTaGAAGGGGCCACCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLSRCHL*KGPPLD
Trigger: ATCCAGAGGTGGCCCCTTTCAGAGGTGGCACCTTGA...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTAACACAGGAATCTGCTaGCCATCCTTGAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: CRALAFHASVISVIGSNSNTGIC*PSLSSK
Trigger: TTTAGAGCTCAAGGATGGTCAGCAGATTCCTGTGTT...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp ATCAATTTGGAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGAGAGATTCTCTCGAGTaGCTCGTGTGGCAAACATCC +
Preference number: 4 (lower is better)
Translates to: INLEPVSVLVGVGLWLSMRDSLE*LVWQTS
Trigger: GGATGTTTGCCACACGAGTCACTCGAGAGAATCTCT...CATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446564.5
CDS-3UTR TCA 90 bp TACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCCTCAAGTATTTCCTCTaGTGGAGGAGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: YRGSYSQRNGGLAFKITLLKYFL*WRSRSR
Trigger: CCTGCTCCTGCTCCTCCATCAGAGGAAATACTTGAG...GAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418140.5
ENST00000448704.5
ENST00000457939.1
CDS-3UTR TCA 90 bp AGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGCTTTCCAAATTATTCAGTCTaGATCATTCCTGGGAACGCT +
Preference number: 4 (lower is better)
Translates to: RILMEPLCVHWTESPSCFPNYSV*IIPGNA
Trigger: AGCGTTCCCAGGAATGATTCAGACTGAATAATTTGG...AAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR TCA 90 bp GGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCGTCACACCAGAAAGCTaGACCCTGACCCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GYRGSYSQRNGGLAFKITVTPES*TLTQKC
Trigger: GCACTTTTGGGTCAGGGTTCAGCTTTCTGGTGTGAC...GGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR TCA 90 bp GGAAAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGGATGCCAGGGTTGGTTCTaGAGCCAAACTGAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GKTEITGYRGSYSQRNGGCQGWF*SQTECP
Trigger: AGGGCACTCAGTTTGGCTTCAGAACCAACCCTGGCA...TCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp TGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTGGCTTTGGCTTTCCATaGCAGTGTCATCAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: CQCHQCHRLQLWRKRYNTGFGFP*QCHQCH
Trigger: ATGACACTGATGACACTGGCATGGAAAGCCAAAGCC...AGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR GCA 90 bp TGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTAGGAAAGTCAGTCTCTaGTCACAGCTCTGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CQCHQCHRLQLWRKRYNTRKVSL*SQLCPK
Trigger: CTTTGGACAGAGCTGTGAGCAGAGACTGACTTTCCT...AGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR GCA 90 bp GGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCTCCTCCACTGAAAGCCCATCGTaGTTTGCTGGGCTTCTTATG +
Preference number: 4 (lower is better)
Translates to: GSYSQRNGGLAFKITLSSTESPS*FAGLLM
Trigger: CATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGT...GGAGGAGAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR GCA 90 bp AGTTCCTTGCTCATGGTCCCTCCTCCATTAAATCAACAGCAGAGAATGAAAGTGACACTGGAGCCTGTCTaGTTGTCTGCTGGTGACACT +
Preference number: 4 (lower is better)
Translates to: SSLLMVPPPLNQQQRMKVTLEPV*LSAGDT
Trigger: AGTGTCACCAGCAGACAAGCAGACAGGCTCCAGTGT...CACTTTCATTCTCTGCTGTTGATTTAATGGAGGAGGGACCATGAGCAAGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR GCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTATTGCCCAGGCTGGAGTaGAGTGGCAGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLLPRLE*SGRILA
Trigger: AGCCAAGATCCTGCCACTGCACTCCAGCCTGGGCAA...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR GCA 90 bp TCCTTTCCAAATGCCAGGGTTGGTTCTGAAGCCAAACTGAGTGCCCTCCTGAGGTCATATTTTGAAAAATaGACCACCCTTGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SFPNARVGSEAKLSALLRSYFEK*TTLGMR
Trigger: CCTCATCCCAAGGGTGGTGCATTTTTCAAAATATGA...CCTCAGGAGGGCACTCAGTTTGGCTTCAGAACCAACCCTGGCATTTGGAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp TTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAGAAGGCCCTCTGATTTaGATCCAGAGACAGGAATCT +
Preference number: 4 (lower is better)
Translates to: FHASVISVIGSNSGGRGIEGPLI*IQRQES
Trigger: AGATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTC...TATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp AGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATCCTAGAAAGGGGCCACCTCTaGATGAGTGGACGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SVIGSNSGGRGITLSTILERGHL*MSGRRE
Trigger: TTCTCTACGTCCACTCATCCAGAGGTGGCCCCTTTC...TAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp CATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATGGACTAGAAGCAAGCTaGGTCTTCTGGGTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: HQCHRLQLWRKRYNTFYHGLEAS*VFWVVS
Trigger: AGAGACGACCCAGAAGACCCAGCTTGCTTCTAGTCC...ATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp TCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAACAAGGAAAGTTGGTGTAGGGCTTTaGCTTTCCATGCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SFQVIRVPAETRVSKTRKVGVGL*LSMPVS
Trigger: TGACACTGGCATGGAAAGCCAAAGCCCTACACCAAC...TTTCCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp CAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAGTTGGTGTAGGGCTTTaGCTTTCCATGCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: QLCSFQVIRVPAETRVSKVGVGL*LSMPVS
Trigger: TGACACTGGCATGGAAAGCCAAAGCCCTACACCAAC...TTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACATAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp ATCAATTTGGAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGGTTGGTGTAGGGCTTTaGCTTTCCATGCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: INLEPVSVLVGVGLWLSMVGVGL*LSMPVS
Trigger: TGACACTGGCATGGAAAGCCAAAGCCCTACACCAAC...CATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCGTTGTCAGTTCCACATaGCTGGGGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLVVSST*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAGCCATGTGGAACTGACAAC...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp ATCAATTTGGAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGGCAACATCATCCCACTaGTGGCTGGAAAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: INLEPVSVLVGVGLWLSMATSSH*WLENWV
Trigger: AACCCAGTTTTCCAGCCACCAGTGGGATGATGTTGC...CATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp AAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAAGGCAAGTTGTCCTGTaGGCAACAGAAGCACCACGC +
Preference number: 4 (lower is better)
Translates to: KTEITGYRGSYSQRNGGLRQVVL*ATEAPR
Trigger: GCGTGGTGCTTCTGTTGCTCACAGGACAACTTGCCT...TAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457939.1
CDS-3UTR TCA 90 bp ACAGTATTCAGGGTTCAAAAACTGTTGCTAGTACTCAGTTTTTCTCCAGCATTCTCAAGGTGCCACCTCTaGAAGGGGCCACCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TVFRVQKLLLVLSFSPAFSRCHL*KGPPLD
Trigger: ATCCAGAGGTGGCCCCTTTCAGAGGTGGCACCTTGA...GAATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR TCA 90 bp TATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGGAAGCTGTGGCAAACATCCTGTaGGCAACAGAAGCACCACGC +
Preference number: 4 (lower is better)
Translates to: YLYSLLLEKLRLQDTEEAVANIL*ATEAPR
Trigger: GCGTGGTGCTTCTGTTGCTCACAGGATGTTTGCCAC...AGCTTCCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR TCA 90 bp CTGGGCTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTCAGAAAGCTGAACCCTaGCCCAAAAGTGCACCCATC +
Preference number: 4 (lower is better)
Translates to: LGFLCILVLVLLFVLVAPQKAEP*PKSAPI
Trigger: GATGGGTGCACTTTTGGGTCAGGGTTCAGCTTTCTG...AGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR TCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAAAGCAGGCACCTCTGTaGGCAACAGAAGCACCACGC +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPKQAPL*ATEAPR
Trigger: GCGTGGTGCTTCTGTTGCTCACAGAGGTGCCTGCTT...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCCCTCCTCTGAAGTCTTaGAACCCTCCAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLPPLKS*NPPSPP
Trigger: TGGAGGACTTGGAGGGTTTCAAGACTTCAGAGGAGG...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp GAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCAAACCAGTTGTGTTTCTaGAAGAACAAAGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: EPVSVLVGVGLWLSMPVSNQLCF*KNKEWV
Trigger: CACCCATTCTTTGTTCTTTCAGAAACACAACTGGTT...TGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
CDS-3UTR GCA 90 bp GAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGACACGAGAGAAACATTCCATTACCTTTTaGCACATCATAGCACAACTC +
Preference number: 4 (lower is better)
Translates to: ERFPECYSFQRQHETREKHSITF*HIIAQL
Trigger: GAGTTGTGCTATGATGTGGCAAAAGGTAATGGAATG...TTTCTCTCGTGTCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR GCA 90 bp TCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAAAACAAGGAAAGGCTTTGGCTTTCCATaGCAGTGTCATCAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: SFQVIRVPAETRVSKTRKGFGFP*QCHQCH
Trigger: ATGACACTGATGACACTGGCATGGAAAGCCAAAGCC...TTTCCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR GCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAGGGACGTGTGGCTTCTaGTTCTCAGACGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPGTCGF*FSDART
Trigger: AGTCCGAGCGTCTGAGAAGCAGAAGCCACACGTCCC...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp AGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATCCTAGAGTTCTTCCAGGCTTaGGAAAGCACGGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: SVIGSNSGGRGITLSTILEFFQA*ESTGKC
Trigger: GCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTC...TAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATGAAAGGGGCCACCTCTaGATGAGTGGACGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNERGHL*MSGRRE
Trigger: TTCTCTACGTCCACTCATCCAGAGGTGGCCCCTTTC...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCGGACTAGAAGCAAGCTaGGTCTTCTGGGTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTGLEAS*VFWVVS
Trigger: AGAGACGACCCAGAAGACCCAGCTTGCTTCTAGTCC...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCTCAGTTCCACATGGCTaGGGAGGCCTCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLSVPHG*GGLRKL
Trigger: AAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACTGA...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCAGGCCATCATCCCACTaGTGGCTGGAAAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTRPSSH*WLENWV
Trigger: AACCCAGTTTTCCAGCCACCAGTGGGATGATGGCCT...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCCTGGTCTTGAACTCCTaGCATCAAGCAATCCACCCG +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLLVLNS*HQAIHP
Trigger: CGGGTGGATTGCTTGATGCCAGGAGTTCAAGACCAG...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp TTCCAACGCCAGCATGAGACACGAGAGAAAGACAGAGTGGGAAACAATGCAGAAAAAATGCACCACCCTTaGGATGAGGAAACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FQRQHETREKDRVGNNAEKMHHP*DEETLV
Trigger: AACCAGAGTTTCCTCATCCCAAGGGTGGTGCATTTT...TTCTGCATTGTTTCCCACTCTGTCTTTCTCTCGTGTCTCATGCTGGCGTTGGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp CTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAGCCTGCGAATGGGCTaGAGCTGTCACTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLMHISPGPFICTRCSWKSLRMG*SCHWLL
Trigger: AAGGAGCCAGTGACAGCTCCAGCCCATTCGCAGGCT...TTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
3UTR CAA 72 bp GGACTGAGTGAAGAAGGGATGGATTCTCAAAACCAGTaGTGTTTCATCATCCCACTGGTGGCTGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: GLSEEGMDSQNQ*CFIIPLVAGKL
Trigger: CAGTTTTCCAGCCACCAGTGGGATGATGAAACACAACTGGTTTTGAGAATCCATCCCTTCTTCACTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415076.6
CDS-3UTR TCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAAGCTGCACTAGCCCCTaGCAAGAGTCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPSCTSP*QESACP
Trigger: AGGACAAGCTGACTCTTGTCAGGGGCTAGTGCAGCT...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCCCTCCTCCCGTGAATTaGATGCTCTTGATGGCATCT +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLPPPVN*MLLMAS
Trigger: AGATGCCATCAAGAGCATTCAATTCACGGGAGGAGG...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR GCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAGAGGCATTGACCGCCTaGTTCCTGCATACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLEALTA*FLHTFA
Trigger: GGCAAAAGTATGCAGGAAGCAGGCGGTCAATGCCTC...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR GCA 90 bp AGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATTAGTCCTGGTCCTTTTATTCAGAGTGGGAAACAATaGAGAAAATGCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: SPSCFAGLLMHISPGPFIQSGKQ*RKCPSL
Trigger: GAGGGATGGGCATTTTCTGCATTGTTTCCCACTCTG...AATAAAAGGACCAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp CATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATAGGAAAGTCAGTCTCTaGTCACAGCTCTGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HQCHRLQLWRKRYNTFYHRKVSL*SQLCPK
Trigger: CTTTGGACAGAGCTGTGAGCAGAGACTGACTTTCCT...ATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR GCA 90 bp AAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAACCCTGACCCAAAAGTaGACCCATCCCTCTCATGTC +
Preference number: 4 (lower is better)
Translates to: KTEITGYRGSYSQRNGGLTLTQK*THPSHV
Trigger: GACATGAGAGGGATGGGTGCACTTTTGGGTCAGGGT...TAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCGAGTTCTTCCAGGCTTaGGAAAGCACGGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLEFFQA*ESTGKC
Trigger: GCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTC...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp GCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTCAGGAATCTTCAACTTaGCATCAACAATGTCCACGA +
Preference number: 4 (lower is better)
Translates to: ASVISVIGSNSGGRGITLQESST*HQQCPR
Trigger: TCGTGGACATTGTTGATGCCAAGTTGAAGATTCCTG...AAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp TATCAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCCATAGGCTCCAACTCTaGAGGAAGAGGTATAACACT +
Preference number: 4 (lower is better)
Translates to: YQLCSFQVIRVPAETRVSHRLQL*RKRYNT
Trigger: AGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATG...GCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACATAACTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp CATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATAGTAAGTGTGCTGGTTaGTGTAGGGCTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HQCHRLQLWRKRYNTFYHSKCAG*CRALAF
Trigger: GAAAGCCAAAGCCCTACACCAACCAGCACACTTACT...ATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCTCTGCTGACCATCCTTaGGCTCTAAAAAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLSADHP*ALKRPR
Trigger: ACGAGGTCTTTTTAGAGCTCAAGGATGGTCAGCAGA...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp CATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATAACACAGGAATCTGCTaGCCATCCTTGAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: HQCHRLQLWRKRYNTFYHNTGIC*PSLSSK
Trigger: TTTAGAGCTCAAGGATGGTCAGCAGATTCCTGTGTT...ATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR TCA 90 bp TTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACACTTCCAACGCCAGCATaGGACACGAGAGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: LVLVLLFVLVAPGKTEITLPTPA*DTRERQ
Trigger: CTGTCTTTCTCTCGTGTCTCATGCTGGCGTTGGAAG...TGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR TCA 90 bp CTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAACTCAAGTATTTCCTCTaGTGGAGGAGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLMHISPGPFICTRCSWKLKYFL*WRSRSR
Trigger: CCTGCTCCTGCTCCTCCATCAGAGGAAATACTTGAG...TTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR TCA 90 bp TTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAAGCTTTCCCCACCTGTaGACCATCTGGTATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LVLVLLFVLVAPGKTEITSFPHL*TIWYSP
Trigger: AGGGGAATACCAGATGGTTCACAGGTGGGGAAAGCT...TGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR TCA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCCTTTCCAGAAGGTTTTaGACTGACTGCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTLSRRF*TDCPEP
Trigger: TGGTTCTGGGCAGTCAGTTCAAAACCTTCTGGAAAG...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCAGTTCCTTCCTCCTCTaGAGTCTTGAAACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTSSFLL*SLETLQ
Trigger: TTGGAGGGTTTCAAGACTTCAGAGGAGGAAGGAACT...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp TATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGGAAGCTATGACTCAGGCTGAATaGACAGATGGAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: YLYSLLLEKLRLQDTEEAMTQAE*TDGGMP
Trigger: TGGCATCCCTCCATCTGTTCATTCAGCCTGAGTCAT...AGCTTCCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp TCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGGAGGCATTGACCGCCTaGTTCCTGCATACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SFYLYSLLLEKLRLQDTEEALTA*FLHTFA
Trigger: GGCAAAAGTATGCAGGAAGCAGGCGGTCAATGCCTC...CTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR GCA 90 bp GAAAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACACTGAAAGCCCATCGTaGTTTGCTGGGCTTCTTATG +
Preference number: 4 (lower is better)
Translates to: EKLRLQDTEEAIANEMVDTESPS*FAGLLM
Trigger: CATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGT...GTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR CCA 90 bp TTTCTCCAGCATTCAGCTCTGCCTTCTTTGAATGACAGTAAGATGGTAATAAAGGAAAGGGGCCACCTCTaGATGAGTGGACGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: FLQHSALPSLNDSKMVIKERGHL*MSGRRE
Trigger: TTCTCTACGTCCACTCATCCAGAGGTGGCCCCTTTC...CTTTATTACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGAATGCTGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCACCATCATCCCACTGGTaGCTGGAAAACTGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPPSSHW*LENWVA
Trigger: TGCAACCCAGTTTTCCAGCCACCAGTGGGATGATGG...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTATGTCTCACTTCCTTCTaGCCTCCATGGTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLCLTSF*PPWFPE
Trigger: CTCTGGAAACCATGGAGGCCAGAAGGAAGTGAGACA...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAACGCTACAAAGAGCATaGCGAGTTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPTLQRA*RVLPGL
Trigger: CAAGCCTGGAAGAACTCGTCATGCTCTTTGTAGCGT...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCAACACAGGAATCTGCTaGCCATCCTTGAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTNTGIC*PSLSSK
Trigger: TTTAGAGCTCAAGGATGGTCAGCAGATTCCTGTGTT...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCGCATGCAATGCTGTTTaGCAGCATTTACCCACAGTA +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLACNAV*QHLPTV
Trigger: TACTGTGGGTAAATGCTGTCAAACAGCATTGCATGC...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp TATCAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGCTGAAACCAGGGTAAGCAACCAGTTGTGTTTCTaGAAGAACAAAGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: YQLCSFQVIRVPAETRVSNQLCF*KNKEWV
Trigger: CACCCATTCTTTGTTCTTTCAGAAACACAACTGGTT...GCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACATAACTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446330.6
CDS-3UTR GCA 90 bp GTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCAGAACAAAGAATGGGTaGTCAGGAGACAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: VISVIGSNSGGRGITLSTRTKNG*SGDNKG
Trigger: ACCTTTATTGTCTCCTGAGCACCCATTCTTTGTTCT...GGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAGAAGGCCCTCTGATTTaGATCCAGAGACAGGAATCT +
Preference number: 4 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLEGPLI*IQRQES
Trigger: AGATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTC...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp GACAGTATTCAGGGTTCAAAAACTGTTGCTAGTACTCAGTTTTTCTCCAGCATTGAGATGAGGGAAGGATaGACTAGAAGCAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DSIQGSKTVASTQFFSSIEMREG*TRSKLG
Trigger: ACCCAGCTTGCTTCTAGTCCATCCTTCCCTCATCTC...AATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp GAAAAACAAAGGACAGTATATCAGTTATGTTCCTTTCAAGTGATCAGGGTGCCAGAGATGAGGGAAGGATaGACTAGAAGCAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: EKQRTVYQLCSFQVIRVPEMREG*TRSKLG
Trigger: ACCCAGCTTGCTTCTAGTCCATCCTTCCCTCATCTC...TGGCACCCTGATCACTTGAAAGGAACATAACTGATATACTGTCCTTTGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp CTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAGCCAGACTGGGTTATaGAGAGGTTCCCAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLMHISPGPFICTRCSWKSQTGL*RGSQSV
Trigger: AACACTCTGGGAACCTCTCCATAACCCAGTCTGGCT...TTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CCA 90 bp TTCCTGCAGGTGTCTGTGGTAGGCAAGTTTAAGATCTCTGTTGATTTTCTGATGCATAGGCTCCAACTCTaGAGGAAGAGGTATAACACT +
Preference number: 4 (lower is better)
Translates to: FLQVSVVGKFKISVDFLMHRLQL*RKRYNT
Trigger: AGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATG...CATCAGAAAATCAACAGAGATCTTAAACTTGCCTACCACAGACACCTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CCA 90 bp TGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAAAATGTTGCAGAGTaGATGACGAGCCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WSFYLYSLLLEKLRLQDTENVAE*MTSQAG
Trigger: CCCAGCTTGGCTCGTCATCCACTCTGCAACATTTTC...TGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CCA 90 bp TTTCTCCAGCATTCAGCTCTGCCTTCTTTGAATGACAGTAAGATGGTAATAAAGACATCATCCCACTGGTaGCTGGAAAACTGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: FLQHSALPSLNDSKMVIKTSSHW*LENWVA
Trigger: TGCAACCCAGTTTTCCAGCCACCAGTGGGATGATGT...CTTTATTACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGAATGCTGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446330.6
3UTR CAA 72 bp ATCTCTGAAGAATGTATTAGTCAGATCTTGCTTAATTaGAAGAGAGCTCAACAGGGTGAGGCAGCCAGACTG +
Preference number: 4 (lower is better)
Translates to: ISEECISQILLN*KRAQQGEAARL
Trigger: CAGTCTGGCTGCCTCACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCTGACTAATACATTCTTCAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
3UTR CAA 72 bp TTCTACAGCTTCTCCATCAGCACTTGCTGCGTCACGTaGTACTTTTATGGAGATGGCTTCTTTACTTACATC +
Preference number: 4 (lower is better)
Translates to: FYSFSISTCCVT*YFYGDGFFTYI
Trigger: GATGTAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAGAAGCTGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp GACAGTATTCAGGGTTCAAAAACTGTTGCTAGTACTCAGTTTTTCTCCAGCATTTCTGCTGACCATCCTTaGGCTCTAAAAAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: DSIQGSKTVASTQFFSSISADHP*ALKRPR
Trigger: ACGAGGTCTTTTTAGAGCTCAAGGATGGTCAGCAGA...AATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR TCA 90 bp TTCTCAATATTCCACACATCTCACAATGTTCAACAGCTCTTGTGTTGTGAGATTAGAGATTCTCTCGAGTaGCTCGTGTGGCAAACATCC +
Preference number: 4 (lower is better)
Translates to: FSIFHTSHNVQQLLCCEIRDSLE*LVWQTS
Trigger: GGATGTTTGCCACACGAGTCACTCGAGAGAATCTCT...AATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTGGAATATTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS-3UTR TCA 90 bp CTGGAAAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGAAGTTAAAGCACAAGTaGACCCTAAAGACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LEKLRLQDTEEAIANEMVKLKHK*TLKTRR
Trigger: TCTCCTGGTCTTTAGGGTTCACTTGTGCTTTAACTT...CACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp GGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCATTCCATTACCTTTTaGCACATCATAGCACAACTC +
Preference number: 4 (lower is better)
Translates to: GYRGSYSQRNGGLAFKITHSITF*HIIAQL
Trigger: GAGTTGTGCTATGATGTGGCAAAAGGTAATGGAATG...GGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR GCA 90 bp GAAGAATGTATTAGTCAGATCTTGCTTAATTTGAAGAGAGCTCAACAGGGTGAGCAGAGTGGGAAACAATaGAGAAAATGCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: EECISQILLNLKRAQQGEQSGKQ*RKCPSL
Trigger: GAGGGATGGGCATTTTCTGCATTGTTTCCCACTCTG...CTCACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCTGACTAATACATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR GCA 90 bp TTTCTCCAGCATTCAGCTCTGCCTTCTTTGAATGACAGTAAGATGGTAATAAAGAGGAAAGTCAGTCTCTaGTCACAGCTCTGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FLQHSALPSLNDSKMVIKRKVSL*SQLCPK
Trigger: CTTTGGACAGAGCTGTGAGCAGAGACTGACTTTCCT...CTTTATTACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGAATGCTGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR GCA 90 bp CTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAAATTCAAATTTGAGTaGAGTGGGGCTGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: LLMHISPGPFICTRCSWKKFKFE*SGAGSG
Trigger: GCCGCTTCCAGCCCCACTGCACTCAAATTTGAATTT...TTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CCA 90 bp TTTCTCCAGCATTCAGCTCTGCCTTCTTTGAATGACAGTAAGATGGTAATAAAGGAAGGCCCTCTGATTTaGATCCAGAGACAGGAATCT +
Preference number: 4 (lower is better)
Translates to: FLQHSALPSLNDSKMVIKEGPLI*IQRQES
Trigger: AGATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTC...CTTTATTACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGAATGCTGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp GACAGTATTCAGGGTTCAAAAACTGTTGCTAGTACTCAGTTTTTCTCCAGCATTAGTAAGTGTGCTGGTTaGTGTAGGGCTTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DSIQGSKTVASTQFFSSISKCAG*CRALAF
Trigger: GAAAGCCAAAGCCCTACACCAACCAGCACACTTACT...AATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCACTCCATCAGAGCTCTTaGGTAACCAGGTGCATTGTT +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPLHQSS*VTRCIV
Trigger: AACAATGCACCTGGTTACCCAAGAGCTCTGATGGAG...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp AAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAAGATCTTGCTTAATTTaGAGAGAGCTCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: KTEITGYRGSYSQRNGGLRSCLI*RELNRV
Trigger: CACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCT...TAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR TCA 90 bp TTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAATAATCTCAGAATCTTaGTGGAGCCCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FLCILVLVLLFVLVAPGKIISES*WSPCVC
Trigger: GCACACACAGGGGCTCCATCAAGATTCTGAGATTAT...TTTTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR TCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAAGTCAGCTTGTCCTTTaGAGCCAGGCATTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPSQLVL*SQALSF
Trigger: AAAACTCAATGCCTGGCTTCAAAGGACAAGCTGACT...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATGTCAAAAGTACTTCTTaGTCTATCAGCAGCAGAATG +
Preference number: 4 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNVKSTS*SISSRM
Trigger: CATTCTGCTGCTGATAGATCAAGAAGTACTTTTGAC...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTATGGCATCTAGAATGGTaGATCCTTTCCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLWHLEW*ILSRRF
Trigger: AAACCTTCTGGAAAGGATTCACCATTCTAGATGCCA...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR GCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCTCAGTTCCAGACCACTaGAATAAACCAAATACAAGC +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLSVPDH*NKPNTS
Trigger: GCTTGTATTTGGTTTATTGCAGTGGTCTGGAACTGA...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCAAGTCTGTCCTATCATaGACTTCTTTGGGTTTCACT +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLKSVLS*TSLGFT
Trigger: AGTGAAACCCAAAGAAGTCCATGATAGGACAGACTT...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp TTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGGAATGCTCCTGGAAAAACTaGGATTACAGGATACAGAGG +
Preference number: 4 (lower is better)
Translates to: FYLYSLLLEKLRLQDTEECSWKN*DYRIQR
Trigger: CCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCA...TTCCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR GCA 90 bp TCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGTTGCTGGGCTTCTTATaGATATTAGTCCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SFYLYSLLLEKLRLQDTELLGFL*ILVLVL
Trigger: AAGGACCAGGACTAATATGCATAAGAAGCCCAGCAA...CTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR GCA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATTCCAGGCTTTGTTGTTaGGTTTATACAGCATATCTT +
Preference number: 4 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNSRLCC*VYTAYL
Trigger: AAGATATGCTGTATAAACGCAACAACAAAGCCTGGA...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp ATTTTAGTGGCAAACAAGTCCAGGGATAATTCTAGCTTCAGTTATGACAGTATTGTTTCATCATCCCACTaGTGGCTGGAAAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: ILVANKSRDNSSFSYDSIVSSSH*WLENWV
Trigger: AACCCAGTTTTCCAGCCACCAGTGGGATGATGAAAC...AATACTGTCATAACTGAAGCTAGAATTATCCCTGGACTTGTTTGCCACTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415076.6
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCGTCCTCCATGAGGATTaGAATCTATTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLVLHED*NLFLPN
Trigger: ATTTGGAAGAAATAGATTCCAATCCTCATGGAGGAC...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CAA 72 bp GCTTCAGTTATGACAGTATTCAGGGTTCAAAAACTGTaGCTAGTACTCAGTTTTTCTCCAGCATTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASVMTVFRVQKL*LVLSFSPAFSS
Trigger: AGAGCTGAATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGTCATAACTGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR TCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCATTACCCCATCAATCCTaGAGGATCATTTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPLPHQS*RIISPN
Trigger: ATTTGGTGAAATGATCCTTCAGGATTGATGGGGTAA...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp TTCTCAATATTCCACACATCTCACAATGTTCAACAGCTCTTGTGTTGTGAGATTAGCAGCCTCTTTGAATaGGGTAATACACAATGGCAA +
Preference number: 4 (lower is better)
Translates to: FSIFHTSHNVQQLLCCEISSLFE*GNTQWQ
Trigger: TTGCCATTGTGTATTACCTCATTCAAAGAGGCTGCT...AATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTGGAATATTGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS-3UTR TCA 90 bp TCAATATTCCACACATCTCACAATGTTCAACAGCTCTTGTGTTGTGAGATTCAAACAGCTCTTGTGTTGTaGGATTCAATTCTCACCTCA +
Preference number: 4 (lower is better)
Translates to: SIFHTSHNVQQLLCCEIQTALVL*DSILTS
Trigger: TGAGGTGAGAATTGAATCTCACAACACAAGAGCTGT...TTGAATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTGGAATATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS-3UTR TCA 90 bp CACACATCTCACAATGTTCAACAGCTCTTGTGTTGTGAGATTCAATTCTCACCTACAGCTAATCTTTATTaGGTGATTTCTATGGCTAGG +
Preference number: 4 (lower is better)
Translates to: HTSHNVQQLLCCEIQFSPTANLY*VISMAR
Trigger: CCTAGCCATAGAAATCACTCAATAAAGATTAGCTGT...AGGTGAGAATTGAATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS-3UTR GCA 90 bp ACAGTATTCAGGGTTCAAAAACTGTTGCTAGTACTCAGTTTTTCTCCAGCATTCAGAACAAAGAATGGGTaGTCAGGAGACAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: TVFRVQKLLLVLSFSPAFRTKNG*SGDNKG
Trigger: ACCTTTATTGTCTCCTGAGCACCCATTCTTTGTTCT...GAATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446330.6
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCGTACTTTTATGGAGATaGCTTCTTTACTTACATCTC +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLVLLWR*LLYLHL
Trigger: GAGATGTAAGTAAAGAAGCCATCTCCATAAAAGTAC...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CCA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCCACGTTGTACTTTTATaGAGATGGCTTCTTTACTTA +
Preference number: 4 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLHVVLL*RWLLYL
Trigger: TAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTG...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR TCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCATTATTAACTCTTTCATaGGAGATTCCTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPLLTLS*EIPLWH
Trigger: ATGCCACAGAGGAATCTCTCATGAAAGAGTTAATAA...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
3UTR CAA 72 bp TCAATATTCCACACATCTCACAATGTTCAACAGCTCTaGTGTTGTGAGATTCAATTCTCACCTCATACACAA +
Preference number: 4 (lower is better)
Translates to: SIFHTSHNVQQL*CCEIQFSPHTQ
Trigger: TTGTGTATGAGGTGAGAATTGAATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTGGAATATTGA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS-3UTR TCA 90 bp TTCTCAATATTCCACACATCTCACAATGTTCAACAGCTCTTGTGTTGTGAGATTCTAATCTTTATTGAGTaGTTTCTATGGCTAGGCACT +
Preference number: 4 (lower is better)
Translates to: FSIFHTSHNVQQLLCCEILIFIE*FLWLGT
Trigger: AGTGCCTAGCCATAGAAATCACTCAATAAAGATTAG...AATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTGGAATATTGAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS-3UTR GCA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAAAAAGTACTTTTAAATaGGAGAGGAGGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SQALSFSNYESPRWHLFPKSTFK*ERRVGK
Trigger: TTTTCCTACCCTCCTCTCGCATTTAAAAGTACTTTT...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS GCA 90 bp GAGTTCTTCCAGGCTTGGGAAAGCACGGGTAAATGCCCGCGGTCCTaGGCGCCAGCGGGGAGCAGTAGAGACTTCCGGCGTCGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: EFFQAWESTGKCPRS*APAGSSRDFRRRLL
Trigger: GAGCAGCCGACGCCGGAAGTCTCTACTGCTCCCCGCTGGCGCGCAGGACCGCGGGCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS CCA 90 bp GGGTCCTCCGGCCGGCTGATCCAGAACTTAGGTCGCCGGGACGTGTaGCTTCTGCTTCTCAGACGCTCGGACTCGCGCCGGGAAGGGTTT +
Preference number: 5 (lower is better)
Translates to: GSSGRLIQNLGRRDV*LLLLRRSDSRREGF
Trigger: AAACCCTTCCCGGCGCGAGTCCGAGCGTCTGAGAAGCAGAAGCCACACGTCCCGGCGACCTAAGTTCTGGATCAGCCGGCCGGAGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS GCA 90 bp AAAGAGCATGACGAGTTCTTCCAGGCTTGGGAAAGCACGGGTAAATaGCCGCGGTCCTGCGCGCCAGCGGGGAGCAGTAGAGACTTCCGG +
Preference number: 5 (lower is better)
Translates to: KEHDEFFQAWESTGK*PRSCAPAGSSRDFR
Trigger: CCGGAAGTCTCTACTGCTCCCCGCTGGCGCGCAGGACCGCGGGCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTCGTCATGCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp AGCAGCCTCCTAAGGGAGAAAGGCTGTCACACCAGAAAGCTGAACCCTGACCCACCTGCCCCTGTCCCTTaGGCAGAGGGAAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SSLLREKGCHTRKLNPDPPAPVP*AEGRGG
Trigger: GCCTCCTCTTCCCTCTGCCAAAGGGACAGGGGCAGG...TGGGTCAGGGTTCAGCTTTCTGGTGTGACAGCCTTTCTCCCTTAGGAGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS TCA 90 bp TCATTTGAAAACCAGGGGAAGGGCACGCCAAACACGCCAAGGCCCTaGGGCAGCCACAGGCTCGGTATCTTCAAGAAGCAGAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SFENQGKGTPNTPRP*GSHRLGIFKKQKAG
Trigger: GCCTGCCTTCTGCTTCTTGAAGATACCGAGCCTGTGGCTGCCTCAGGGCCTTGGCGTGTTTGGCGTGCCCTTCCCCTGGTTTTCAAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478504.1
CDS TCA 90 bp AACGGCACCTCTGCCAAGGTGACATGTGAGACTGGAGGGATCATTTaGAAACCAGGGGAAGGGCACGCCAAACACGCCAAGGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: NGTSAKVTCETGGII*KPGEGHAKHAKALR
Trigger: CCTCAGGGCCTTGGCGTGTTTGGCGTGCCCTTCCCCTGGTTTTCAAATGATCCCTCCAGTCTCACATGTCACCTTGGCAGAGGTGCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478504.1
CDS-3UTR CAA 90 bp CAAGAGCTGGAGCCGAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTGCCCGTGGAAAAGGATCCTaGCTCCCAGAGGCATTGACC +
Preference number: 5 (lower is better)
Translates to: QELEPRFNHSTQAVGCSARGKGS*LPEALT
Trigger: GGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACG...GGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTCGGCTCCAGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000451651.5
CDS TCA 90 bp TTCTCTTCTGAAGGTCCCATCACACTAATGAAGGGAAAGGTGACCTaGCCCTGGAGAGGCCAAGGGAATCCCCCTCCTGGGCTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: FSSEGPITLMKGKVT*PWRGQGNPPPGLLP
Trigger: GGGAAGCAGCCCAGGAGGGGGATTCCCTTGGCCTCTCCAGGGTCAGGTCACCTTTCCCTTCATTAGTGTGATGGGACCTTCAGAAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS CCA 90 bp CAAGGTCCAGAGTGTCCGTGGGGAAAGGCAAACCTGCCGCTGAGTTaGAAGACAACAGCTGCTAACACACGAAGCCTCAGAAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: QGPECPWGKANLPLS*KTTAANTRSLRKPS
Trigger: CGAGGGCTTTCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGCAGGTTTGCCTTTCCCCACGGACACTCTGGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310564.10
CDS-3UTR CAA 90 bp GCTGGACGCACAGCCACAGCTTTCCCCACCTGTGAACCATCTGGTATTCCCCTTCGTGGAAAAGGATCCTaGCTCCCAGAGGCATTGACC +
Preference number: 5 (lower is better)
Translates to: AGRTATAFPTCEPSGIPLRGKGS*LPEALT
Trigger: GGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACG...AAGGGGAATACCAGATGGTTCACAGGTGGGGAAAGCTGTGGCTGTGCGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CAA 90 bp CGAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTGCCCAGGTCTCACCGAGCATCTGTCGGGATTTaGCCATCGTGGTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RDSTIQPRQSAAVPRSHRASVGI*PSWSLL
Trigger: AAGCAGAGACCACGATGGCAAAATCCCGACAGATGC...TCGGTGAGACCTGGGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS TCA 90 bp AGCTACAAGGTCCAGAGTGTCCGTGGGGAAAGGCAAACCTGCCGCTaGGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: SYKVQSVRGERQTCR*VGRQQLLTHEASES
Trigger: GCTTTCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGCAGGTTTGCCTTTCCCCACGGACACTCTGGACCTTGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310564.10
CDS TCA 90 bp AAAGAACCGGTGTGCACAAGGGAGAACCGCAGACAGCAAGTGCTTTaGCCACAGCACAAACACAGGGCCAATCAACAGGAGGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: KEPVCTRENRRQQVL*PQHKHRANQQEAGP
Trigger: AGGTCCAGCCTCCTGTTGATTGGCCCTGTGTTTGTGCTGTGGTCAAAGCACTTGCTGTCTGCGGTTCTCCCTTGTGCACACCGGTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS TCA 90 bp CAGGCAGGCAGTGTTTTGCAGGGATGTGCAGATGACCTTGGGCCTTaGCCTCATGCAGACCCTTTCTGCTTCACCTCATTTCTACCCTCA +
Preference number: 5 (lower is better)
Translates to: QAGSVLQGCADDLGP*PHADPFCFTSFLPS
Trigger: TGAGGGTAGAAATGAGGTGAAGCAGAAAGGGTCTGCATGAGGTCAAGGCCCAAGGTCATCTGCACATCCCTGCAAAACACTGCCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS-3UTR CAA 90 bp CAAGAGCTGGAGCCGAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTGCCGCTTCCTGCATACTTTaGCCACATCATAGCACAACT +
Preference number: 5 (lower is better)
Translates to: QELEPRFNHSTQAVGCSAASCIL*PHHSTT
Trigger: AGTTGTGCTATGATGTGGCAAAAGTATGCAGGAAGC...GGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTCGGCTCCAGCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000451651.5
CDS-3UTR CAA 90 bp ACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCCGTGGAAAAGGATCCTaGCTCCCAGAGGCATTGACC +
Preference number: 5 (lower is better)
Translates to: TSKCAGWCRALAFHASVIRGKGS*LPEALT
Trigger: GGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACG...GATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp AATCTCAGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGCGTGGAAAAGGATCCTaGCTCCCAGAGGCATTGACC +
Preference number: 5 (lower is better)
Translates to: NLRILMEPLCVHWTESPSRGKGS*LPEALT
Trigger: GGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACG...CGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCTGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR CAA 90 bp ACCCAAAAGTGCACCCATCCCTCTCATGTCCTGCCCCTGTCCCTTTGGCAGAGGAAAACTGCTGCCGCTTaGCCACCAGTAGCATTAAAA +
Preference number: 5 (lower is better)
Translates to: TQKCTHPSHVLPLSLWQRKTAAA*PPVALK
Trigger: TTTTAATGCTACTGGTGGCAAAGCGGCAGCAGTTTT...CCTCTGCCAAAGGGACAGGGGCAGGACATGAGAGGGATGGGTGCACTTTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS TCA 90 bp TCCCAAGCAGGGTGTTCAGTTTGGCCGCAGAAAGTGCTTCTCTTCTaGAGGTCCCATCACACTAATGAAGGGAAAGGTGACCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: SQAGCSVWPQKVLLF*RSHHTNEGKGDLTL
Trigger: CAGGGTCAGGTCACCTTTCCCTTCATTAGTGTGATGGGACCTTCAGAAGAGAAGCACTTTCTGCGGCCAAACTGAACACCCTGCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS TCA 90 bp AAAAACCAAAGCACAGGCAGGCAGTGTTTTGCAGGGATGTGCAGATaGCCTTGGGCCTTGACCTCATGCAGACCCTTTCTGCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: KNQSTGRQCFAGMCR*PWALTSCRPFLLHL
Trigger: GAGGTGAAGCAGAAAGGGTCTGCATGAGGTCAAGGCCCAAGGTCATCTGCACATCCCTGCAAAACACTGCCTGCCTGTGCTTTGGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS GCA 90 bp GGTGCCTTTGGGCTAGCAGCAGCCTGGTTAGTGCAACCAGACATATaGACCAAGAGAGGAAGTAACACTCAGGAAGTGGTCAACCTTGCT +
Preference number: 5 (lower is better)
Translates to: GAFGLAAAWLVQPDI*TKRGSNTQEVVNLA
Trigger: AGCAAGGTTGACCACTTCCTGAGTGTTACTTCCTCTCTTGGTGCATATGTCTGGTTGCACTAACCAGGCTGCTGCTAGCCCAAAGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS GCA 90 bp AGAGGCAGGCTTCCCAAGCAGGGTGTTCAGTTTGGCCGCAGAAAGTaGTTCTCTTCTGAAGGTCCCATCACACTAATGAAGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: RGRLPKQGVQFGRRK*FSSEGPITLMKGKV
Trigger: CACCTTTCCCTTCATTAGTGTGATGGGACCTTCAGAAGAGAAGCACTTTCTGCGGCCAAACTGAACACCCTGCTTGGGAAGCCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS-3UTR CAA 90 bp TTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATATTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: FHASVISVIGSNSGGRGILLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...TATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTCGTGGAAAAGGATCCTaGCTCCCAGAGGCATTGACC +
Preference number: 5 (lower is better)
Translates to: CRALAFHASVISVIGSNSRGKGS*LPEALT
Trigger: GGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACG...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp GGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAGAAGGCCCTCTGATTaGGATCCAGAGACAGGAATC +
Preference number: 5 (lower is better)
Translates to: GWCRALAFHASVISVIGSRRPSD*DPETGI
Trigger: GATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTCT...GGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp ATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGACACGAGAGGTTCTAGTGGGGAACTaGGCCCTGGAACATTCCATT +
Preference number: 5 (lower is better)
Translates to: MERFPECYSFQRQHETREVLVGN*ALEHSI
Trigger: AATGGAATGTTCCAGGGCCAAGTTCCCCACTAGAAC...CTCTCGTGTCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR CAA 90 bp AGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGACACGAGAGAAAGACCGCCCTCCCTCATTaGCTTCCTTTCCAAATGCCA +
Preference number: 5 (lower is better)
Translates to: RGSQSVTASNASMRHERKTALPH*LPFQMP
Trigger: TGGCATTTGGAAAGGAAGCAAATGAGGGAGGGCGGT...CTTTCTCTCGTGTCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS CCA 90 bp TGCAACCAGACATATGCACCAAGAGAGGAAGTAACACTCAGGAAGTaGTCAACCTTGCTGCAGGGCATCAGCGGAGGTTTCACAGAGGAA +
Preference number: 5 (lower is better)
Translates to: CNQTYAPREEVTLRK*STLLQGISGGFTEE
Trigger: TTCCTCTGTGAAACCTCCGCTGATGCCCTGCAGCAAGGTTGACCACTTCCTGAGTGTTACTTCCTCTCTTGGTGCATATGTCTGGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS-3UTR CAA 90 bp GTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATCCTAACCTTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: VIGSNSGGRGITLSTILTLLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...GGTTAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp GGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCTCCTCCCGTGGAAAAGGATCCTaGCTCCCAGAGGCATTGACC +
Preference number: 5 (lower is better)
Translates to: GSYSQRNGGLAFKITLSSRGKGS*LPEALT
Trigger: GGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACG...GGAGGAGAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418140.5
ENST00000448704.5
ENST00000457939.1
CDS-3UTR CAA 90 bp TTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAGGTTGGTGTAGGGCTTaGGCTTTCCATGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: FHASVISVIGSNSGGRGIGWCRA*AFHASV
Trigger: GACACTGGCATGGAAAGCCAAAGCCCTACACCAACC...TATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp GCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTGGTTGGTGTAGGGCTTaGGCTTTCCATGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: ASVISVIGSNSGGRGITLGWCRA*AFHASV
Trigger: GACACTGGCATGGAAAGCCAAAGCCCTACACCAACC...AAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp AGTCTGACAATGCTGGACGCACAGCCACAGCTTTCCCCACCTGTGAACCATCTGTATAATCTCAGAATCTaGATGGAGCCCCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SLTMLDAQPQLSPPVNHLYNLRI*MEPLCV
Trigger: CACACACAGGGGCTCCATCAAGATTCTGAGATTATA...CAGATGGTTCACAGGTGGGGAAAGCTGTGGCTGTGCGTCCAGCATTGTCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CAA 90 bp AAGAGCTGGAGCCGAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTGCCCGACTTAGCAGCCTCTTaGAATGAGGTAATACACAAT +
Preference number: 5 (lower is better)
Translates to: KSWSRDSTIQPRQSAAVPDLAAS*NEVIHN
Trigger: ATTGTGTATTACCTCATTCAAAGAGGCTGCTAAGTC...GGGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTCGGCTCCAGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS CCA 90 bp AGTGCTTTGACCACAGCACAAACACAGGGCCAATCAACAGGAGGCTaGACCTGCAGAAGCAAGATGCTAGCAATAAAAGCTGTACGTGAC +
Preference number: 5 (lower is better)
Translates to: SALTTAQTQGQSTGG*TCRSKMLAIKAVRD
Trigger: GTCACGTACAGCTTTTATTGCTAGCATCTTGCTTCTGCAGGTCCAGCCTCCTGTTGATTGGCCCTGTGTTTGTGCTGTGGTCAAAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS-3UTR CAA 90 bp GGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCGCTTCCTGCATACTTTaGCCACATCATAGCACAACT +
Preference number: 5 (lower is better)
Translates to: GWCRALAFHASVISVIGSASCIL*PHHSTT
Trigger: AGTTGTGCTATGATGTGGCAAAAGTATGCAGGAAGC...GGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACACCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp TGTAGGGCTTTGGCTTTCCATGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTAGAAGGCCCTCTGATTaGGATCCAGAGACAGGAATC +
Preference number: 5 (lower is better)
Translates to: CRALAFHASVISVIGSNSRRPSD*DPETGI
Trigger: GATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTCT...AGAGTTGGAGCCTATGACACTGATGACACTGGCATGGAAAGCCAAAGCCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp GGAAAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGGATTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: GKTEITGYRGSYSQRNGGLLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...TCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418140.5
ENST00000448704.5
ENST00000457939.1
CDS-3UTR CAA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATTTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNLLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp GGCTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTGGATTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: GFLCILVLVLLFVLVAPGLLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...TCCAGGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR CAA 90 bp CTGGAAAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGTTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: LEKLRLQDTEEAIANEMVLLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...CACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418140.5
ENST00000448704.5
ENST00000457939.1
CDS-3UTR CAA 90 bp GAACCAGTAAGTGTGCTGGTTGGTGTAGGGCTTTGGCTTTCCATGCCAGTGTCAACAGGAATCTTCAACTaGGCATCAACAATGTCCACG +
Preference number: 5 (lower is better)
Translates to: EPVSVLVGVGLWLSMPVSTGIFN*ASTMST
Trigger: CGTGGACATTGTTGATGCCAAGTTGAAGATTCCTGT...TGACACTGGCATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp AGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCATCCTAGGTTGGTGTAGGGCTTaGGCTTTCCATGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SVIGSNSGGRGITLSTILGWCRA*AFHASV
Trigger: GACACTGGCATGGAAAGCCAAAGCCCTACACCAACC...TAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS TCA 90 bp GGAGTATCCCACCCATTCCAAGTTGCCACCAAGAGAAGAAACTACTaGGGTACACATTTGTGCTTTCCAAACACACCTGAAGGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: GVSHPFQVATKRRNY*GTHLCFPNTPEGRH
Trigger: GTGCCTTCCTTCAGGTGTGTTTGGAAAGCACAAATGTGTACCTCAGTAGTTTCTTCTCTTGGTGGCAACTTGGAATGGGTGGGATACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488813.1
CDS-3UTR CAA 90 bp CACACATCTCACAATGTTCAACAGCTCTTGTGTTGTGAGATTCAATTCTCACCTTTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: HTSHNVQQLLCCEIQFSPLLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...AGGTGAGAATTGAATCTCACAACACAAGAGCTGTTGAACATTGTGAGATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS-3UTR CAA 90 bp ATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGACACGAGAGACATTCCATTACCTTTaGCCACATCATAGCACAACT +
Preference number: 5 (lower is better)
Translates to: MERFPECYSFQRQHETRETFHYL*PHHSTT
Trigger: AGTTGTGCTATGATGTGGCAAAAGGTAATGGAATGT...CTCTCGTGTCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR CAA 90 bp AAGGAAGCCAGAAAGGAGGCCAGACCGCCCTCCCTCATTTGCTTCCTTTCCAAAACATTCCATTACCTTTaGCCACATCATAGCACAACT +
Preference number: 5 (lower is better)
Translates to: KEARKEARPPSLICFLSKTFHYL*PHHSTT
Trigger: AGTTGTGCTATGATGTGGCAAAAGGTAATGGAATGT...TTTGGAAAGGAAGCAAATGAGGGAGGGCGGTCTGGCCTCCTTTCTGGCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS TCA 90 bp ACACAGCTGGTCCATGGCAAAGCCGAGGCCAGAATCCATGATACCTaGCTTCTCAACACTGCCTGTTCCACTAAGTTGAGACATAAAATA +
Preference number: 5 (lower is better)
Translates to: TQLVHGKAEARIHDT*LLNTACSTKLRHKI
Trigger: TATTTTATGTCTCAACTTAGTGGAACAGGCAGTGTTGAGAAGTCAGGTATCATGGATTCTGGCCTCGGCTTTGCCATGGACCAGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS CCA 90 bp TATTCAGGGAGTGACTTTCTTCTATTGTCTAACTCGAGAATACCCTaGCAGGTTCTAGTGGGGAACTTGGCCCTGGAACATTCCATTACC +
Preference number: 5 (lower is better)
Translates to: YSGSDFLLLSNSRIP*QVLVGNLALEHSIT
Trigger: GGTAATGGAATGTTCCAGGGCCAAGTTCCCCACTAGAACCTGCCAGGGTATTCTCGAGTTAGACAATAGAAGAAAGTCACTCCCTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR CAA 90 bp TGCCAGTGTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTGCTTCCTGCATACTTTaGCCACATCATAGCACAACT +
Preference number: 5 (lower is better)
Translates to: CQCHQCHRLQLWRKRYNTASCIL*PHHSTT
Trigger: AGTTGTGCTATGATGTGGCAAAAGTATGCAGGAAGC...AGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415076.6
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp GACAGTATTCAGGGTTCAAAAACTGTTGCTAGTACTCAGTTTTTCTCCAGCATTTTGCTCCCAGAGGCATaGACCGCCTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: DSIQGSKTVASTQFFSSILLPEA*TACFLH
Trigger: ATGCAGGAAGCAGGCGGTCAATGCCTCTGGGAGCAA...AATGCTGGAGAAAAACTGAGTACTAGCAACAGTTTTTGAACCCTGAATACTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CAA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTACGTGGAAAAGGATCCTaGCTCCCAGAGGCATTGACC +
Preference number: 5 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLRGKGS*LPEALT
Trigger: GGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACG...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp ACTGGGTTATGGAGAGGTTCCCAGAGTGTTACAGCTTCCAACGCCAGCATGAGAAGTGACTTTCTTCTATaGTCTAACTCGAGAATACCC +
Preference number: 5 (lower is better)
Translates to: TGLWRGSQSVTASNASMRSDFLL*SNSRIP
Trigger: GGGTATTCTCGAGTTAGACAATAGAAGAAAGTCACT...TCTCATGCTGGCGTTGGAAGCTGTAACACTCTGGGAACCTCTCCATAACCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR CAA 90 bp ACTGGACTGAAAGCCCATCGTGCTTTGCTGGGCTTCTTATGCATATTAGTCCTGTCCTGGTCCTTTTATTaGTACTCGTTGCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: TGLKAHRALLGFLCILVLSWSFY*YSLLLE
Trigger: TTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGA...CAGGACTAATATGCATAAGAAGCCCAGCAAAGCACGATGGGCTTTCAGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR CAA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCTCCTCCTCTGAAGTCTaGAAACCCTCCAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTSSSEV*KPSKSS
Trigger: GGAGGACTTGGAGGGTTTCAAGACTTCAGAGGAGGA...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp TTCCTGCAGGTGTCTGTGGTAGGCAAGTTTAAGATCTCTGTTGATTTTCTGATGAGAAGGCCCTCTGATTaGGATCCAGAGACAGGAATC +
Preference number: 5 (lower is better)
Translates to: FLQVSVVGKFKISVDFLMRRPSD*DPETGI
Trigger: GATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTCT...CATCAGAAAATCAACAGAGATCTTAAACTTGCCTACCACAGACACCTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446330.6
ENST00000446564.5
CDS-3UTR CAA 90 bp TTCCAACGCCAGCATGAGACACGAGAGAAAGACAGAGTGGGAAACAATGCAGAACAGATCTTGCTTAATTaGAAGAGAGCTCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: FQRQHETREKDRVGNNAEQILLN*KRAQQG
Trigger: ACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCTG...TTCTGCATTGTTTCCCACTCTGTCTTTCTCTCGTGTCTCATGCTGGCGTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR CAA 90 bp CCCTCCTGTGAAGTTAAAGCACAAGTGAACCCTAAAGACCAGGAGAAGCCCATACAGATCTTGCTTAATTaGAAGAGAGCTCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: PSCEVKAQVNPKDQEKPIQILLN*KRAQQG
Trigger: ACCCTGTTGAGCTCTCTTCAAATTAAGCAAGATCTG...TATGGGCTTCTCCTGGTCTTTAGGGTTCACTTGTGCTTTAACTTCACAGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS-3UTR CAA 90 bp AGAATCTTGATGGAGCCCCTGTGTGTGCACTGGACTGAAAGCCCATCGTGCTTTTTTTATTTGTACTCGTaGCTCCTGGAAAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: RILMEPLCVHWTESPSCFFYLYS*LLEKLR
Trigger: TCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAA...AAAGCACGATGGGCTTTCAGTCCAGTGCACACACAGGGGCTCCATCAAGATTCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR CAA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATTCTCCATCAGAGCTCTaGGGTAACCAGGTGCATTGT +
Preference number: 5 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNSPSEL*GNQVHC
Trigger: ACAATGCACCTGGTTACCCAAGAGCTCTGATGGAGA...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp TACAGAGGAAGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCGCTTCCTGCATACTTTaGCCACATCATAGCACAACT +
Preference number: 5 (lower is better)
Translates to: YRGSYSQRNGGLAFKITLASCIL*PHHSTT
Trigger: AGTTGTGCTATGATGTGGCAAAAGTATGCAGGAAGC...GAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000457939.1
CDS-3UTR CAA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAAGAAGGCCCTCTGATTaGGATCCAGAGACAGGAATC +
Preference number: 5 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLRRPSD*DPETGI
Trigger: GATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTCT...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp GTCATCAGTGTCATAGGCTCCAACTCTGGAGGAAGAGGTATAACACTTTCTACCTCAGCTCTGCCTTCTTaGAATGACAGTAAGATGGTA +
Preference number: 5 (lower is better)
Translates to: VISVIGSNSGGRGITLSTSALPS*NDSKMV
Trigger: TACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGA...GGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CAA 90 bp GCTGGGCTTCTTATGCATATTAGTCCTGGTCCTTTTATTTGTACTCGTTGCTCCTCCTGGTCCTTTTATTaGTACTCGTTGCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: AGLLMHISPGPFICTRCSSWSFY*YSLLLE
Trigger: TTCCAGGAGCAACGAGTACAAATAAAAGGACCAGGA...GGAGCAACGAGTACAAATAAAAGGACCAGGACTAATATGCATAAGAAGCCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR CAA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATGAGTCAGCTTGTCCTTaGAAGCCAGGCATTGAGTTT +
Preference number: 5 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNESACP*KPGIEF
Trigger: AAACTCAATGCCTGGCTTCAAAGGACAAGCTGACTC...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS TCA 90 bp ATTTGGCAAGGAGGACTCCTATGTCAATGCTCTGGGTACTTCCAATaGTCGCTCAAAAGTCCACTGTTAAAAAGGAGCAAACTCCTGATA +
Preference number: 5 (lower is better)
Translates to: IWQGGLLCQCSGYFQ*SLKSPLLKRSKLLI
Trigger: TATCAGGAGTTTGCTCCTTTTTAACAGTGGACTTTTGAGCGATCATTGGAAGTACCCAGAGCATTGACATAGGAGTCCTCCTTGCCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488813.1
CDS GCA 90 bp GTGGTAGAACTGGGATTCAAATTCATGCAGTCTGGCTCCAGCATCTaGTCTTTCAACCACTGTGGTACACGAGCTTTAAGATATCTAATT +
Preference number: 5 (lower is better)
Translates to: VVELGFKFMQSGSSI*SFNHCGTRALRYLI
Trigger: AATTAGATATCTTAAAGCTCGTGTACCACAGTGGTTGAAAGAGCAGATGCTGGAGCCAGACTGCATGAATTTGAATCCCAGTTCTACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS-3UTR CAA 90 bp GTCCTTTTATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGTTCTAGTGGGGAACTaGGCCCTGGAACATTCCATT +
Preference number: 5 (lower is better)
Translates to: VLLFVLVAPGKTEITGYRVLVGN*ALEHSI
Trigger: AATGGAATGTTCCAGGGCCAAGTTCCCCACTAGAAC...TCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS-3UTR CAA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCGTAGGAAAAGATAAGTaGCTGAAGCCTGCAGTGACT +
Preference number: 5 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLVGKDK*LKPAVT
Trigger: AGTCACTGCAGGCTTCAGCAACTTATCTTTTCCTAC...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAACAGGAATCTTCAACTaGGCATCAACAATGTCCACG +
Preference number: 5 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLTGIFN*ASTMST
Trigger: CGTGGACATTGTTGATGCCAAGTTGAAGATTCCTGT...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp AAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTATATAATCTCAGAATCTaGATGGAGCCCCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: KTEITGYRGSYSQRNGGLYNLRI*MEPLCV
Trigger: CACACACAGGGGCTCCATCAAGATTCTGAGATTATA...TAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR CAA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAATCATCAAAGGCAAGTaGTCAGTTCCACATGGCTGG +
Preference number: 5 (lower is better)
Translates to: SQALSFSNYESPRWHLFPIIKGK*SVPHGW
Trigger: CCAGCCATGTGGAACTGACAACTTGCCTTTGATGAT...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCACAGTATTCATCTCCTaGTACATCTCCATCAGAGCT +
Preference number: 5 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLTVFIS*YISIRA
Trigger: AGCTCTGATGGAGATGTACAAGGAGATGAATACTGT...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp ACTTCTCATCCATACAAGTTTGATCCTGAGGTTACAGCAATTCGGTCACATCTCCCACTTCTAGTTCTCTaGCTATTTTCAGCCCATCTA +
Preference number: 5 (lower is better)
Translates to: TSHPYKFDPEVTAIRSHLPLLVL*LFSAHL
Trigger: TAGATGGGCTGAAAATAGCAAGAGAACTAGAAGTGG...GAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGATGAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp CATGAAAACAGTATTCATCTCCTTGTACATCTCCATCAGAGCTCTTGGGTAACCCTATCATGGACTTCTTaGGGTTTCACTCAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: HENSIHLLVHLHQSSWVTLSWTS*GFTQLL
Trigger: AAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAG...GGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCAGCTTCCTGCATACTTTaGCCACATCATAGCACAACT +
Preference number: 5 (lower is better)
Translates to: SQALSFSNYESPRWHLFPASCIL*PHHSTT
Trigger: AGTTGTGCTATGATGTGGCAAAAGTATGCAGGAAGC...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp TTTCTCCAGCATTCAGCTCTGCCTTCTTTGAATGACAGTAAGATGGTAATAAAGACAGGAATCTTCAACTaGGCATCAACAATGTCCACG +
Preference number: 5 (lower is better)
Translates to: FLQHSALPSLNDSKMVIKTGIFN*ASTMST
Trigger: CGTGGACATTGTTGATGCCAAGTTGAAGATTCCTGT...CTTTATTACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGAATGCTGGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415076.6
ENST00000446330.6
CDS-3UTR CAA 90 bp AGCTATAGCCAACGAAATGGTGGACTAGCCTTTAAAATCACCCTCTCCTCCTTTTTTTATTTGTACTCGTaGCTCCTGGAAAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: SYSQRNGGLAFKITLSSFFYLYS*LLEKLR
Trigger: TCTCAGTTTTTCCAGGAGCAACGAGTACAAATAAAA...AAAGGAGGAGAGGGTGATTTTAAAGGCTAGTCCACCATTTCGTTGGCTATAGCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000418140.5
ENST00000448704.5
CDS-3UTR CAA 90 bp TATTTGTACTCGTTGCTCCTGGAAAAACTGAGATTACAGGATACAGAGGAAGCTGGCTCCTTTCATATTTaGAAAAATGCACCACCCTTG +
Preference number: 5 (lower is better)
Translates to: YLYSLLLEKLRLQDTEEAGSFHI*KNAPPL
Trigger: CAAGGGTGGTGCATTTTTCAAAATATGAAAGGAGCC...AGCTTCCTCTGTATCCTGTAATCTCAGTTTTTCCAGGAGCAACGAGTACAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448704.5
CDS GCA 90 bp ATTCTTACTGTTCAGTGTAAAAGTCCTTGGCAGGCATGCCTTTCCTaGTATTTTTCCAGACAAGGTGGATACATATTTGTACCTTCATTC +
Preference number: 5 (lower is better)
Translates to: ILTVQCKSPWQACLS*YFSRQGGYIFVPSF
Trigger: GAATGAAGGTACAAATATGTATCCACCTTGTCTGGAAAAATAGCAGGAAAGGCATGCCTGCCAAGGACTTTTACACTGAACAGTAAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS-3UTR CAA 90 bp TTTCTCCAGCATTCAGCTCTGCCTTCTTTGAATGACAGTAAGATGGTAATAAAGGATTCTCAAAACCAGTaGTGTTTCATCATCCCACTG +
Preference number: 5 (lower is better)
Translates to: FLQHSALPSLNDSKMVIKDSQNQ*CFIIPL
Trigger: CAGTGGGATGATGAAACACAACTGGTTTTGAGAATC...CTTTATTACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGAATGCTGGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415076.6
CDS-3UTR CAA 90 bp AAAACTGAGATTACAGGATACAGAGGAAGCTATAGCCAACGAAATGGTGGACTATTTACAAATTCAAATTaGAGTGCAGTGGGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: KTEITGYRGSYSQRNGGLFTNSN*SAVGLE
Trigger: TTCCAGCCCCACTGCACTCAAATTTGAATTTGTAAA...TAGTCCACCATTTCGTTGGCTATAGCTTCCTCTGTATCCTGTAATCTCAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418140.5
CDS-3UTR CAA 90 bp AGCCAGGCATTGAGTTTTTCTAACTATGAAAGTCCTAGATGGCATCTTTTTCCACTCATCCATACAAGTTaGATCCTGAGGTTACAGCAA +
Preference number: 5 (lower is better)
Translates to: SQALSFSNYESPRWHLFPLIHTS*ILRLQQ
Trigger: TTGCTGTAACCTCAGGATCAAACTTGTATGGATGAG...TGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp CTCTCACATTTAGTGAGAGGCCACTGTGGGGTTATTAATTGGCCCAATTTCAATTCACCAAATAGGAATTaGGAGTTGACAGAGTTTTGT +
Preference number: 5 (lower is better)
Translates to: LSHLVRGHCGVINWPNFNSPNRN*ELTEFC
Trigger: ACAAAACTCTGTCAACTCCAAATTCCTATTTGGTGA...ATTGAAATTGGGCCAATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS-3UTR CAA 90 bp GTTTTCAGAAGTCTGTCCTATCATGGACTTCTTTGGGTTTCACTCAGCTTCTTAATTAATGTTGATATTTaGACCTCCTCCCGTGAATTG +
Preference number: 5 (lower is better)
Translates to: VFRSLSYHGLLWVSLSFLINVDI*TSSREL
Trigger: CAATTCACGGGAGGAGGTCAAAATATCAACATTAAT...TAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS GCA 72 bp CAGGCTTGGGAAAGCACGGGTAAATGCCCGCGGTCCTaGGCGCCAGCGGGGAGCAGTAGAGACTTCCGGCGT +
Preference number: 6 (lower is better)
Translates to: QAWESTGKCPRS*APAGSSRDFRR
Trigger: ACGCCGGAAGTCTCTACTGCTCCCCGCTGGCGCGCAGGACCGCGGGCATTTACCCGTGCTTTCCCAAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS CCA 72 bp GGCCGGCTGATCCAGAACTTAGGTCGCCGGGACGTGTaGCTTCTGCTTCTCAGACGCTCGGACTCGCGCCGG +
Preference number: 6 (lower is better)
Translates to: GRLIQNLGRRDV*LLLLRRSDSRR
Trigger: CCGGCGCGAGTCCGAGCGTCTGAGAAGCAGAAGCCACACGTCCCGGCGACCTAAGTTCTGGATCAGCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS TCA 72 bp ACAGGCATCTCCCAGAGTGCCTTCCTGTGTCCTCGGTaGTGGCCAAAGATACCTCCCGGGGCAGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: TGISQSAFLCPR*WPKIPPGAGAG
Trigger: CCCTGCCCCTGCCCCGGGAGGTATCTTTGGCCATCACCGAGGACACAGGAAGGCACTCTGGGAGATGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488813.1
CDS GCA 72 bp GACGAGTTCTTCCAGGCTTGGGAAAGCACGGGTAAATaGCCGCGGTCCTGCGCGCCAGCGGGGAGCAGTAGA +
Preference number: 6 (lower is better)
Translates to: DEFFQAWESTGK*PRSCAPAGSSR
Trigger: TCTACTGCTCCCCGCTGGCGCGCAGGACCGCGGGCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS CAA 72 bp GGAGCAGAGGCAGGCTTCCCAAGCAGGGTGTTCAGTTaGGCCGCAGAAAGTGCTTCTCTTCTGAAGGTCCCA +
Preference number: 6 (lower is better)
Translates to: GAEAGFPSRVFS*AAESASLLKVP
Trigger: TGGGACCTTCAGAAGAGAAGCACTTTCTGCGGCCAAACTGAACACCCTGCTTGGGAAGCCTGCCTCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS CAA 90 bp CAAAGAACCGGTGTGCACAAGGGAGAACCGCAGACAGCAAGTGCTTaGACCACAGCACAAACACAGGGCCAATCAACAGGAGGCTGGACC +
Preference number: 6 (lower is better)
Translates to: QRTGVHKGEPQTASA*TTAQTQGQSTGGWT
Trigger: GGTCCAGCCTCCTGTTGATTGGCCCTGTGTTTGTGCTGTGGTCAAAGCACTTGCTGTCTGCGGTTCTCCCTTGTGCACACCGGTTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS TCA 72 bp AGCACAGGCAGGCAGTGTTTTGCAGGGATGTGCAGATaGCCTTGGGCCTTGACCTCATGCAGACCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: STGRQCFAGMCR*PWALTSCRPFL
Trigger: CAGAAAGGGTCTGCATGAGGTCAAGGCCCAAGGTCATCTGCACATCCCTGCAAAACACTGCCTGCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS CCA 72 bp GAGTGTCCGTGGGGAAAGGCAAACCTGCCGCTGAGTTaGAAGACAACAGCTGCTAACACACGAAGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: ECPWGKANLPLS*KTTAANTRSLR
Trigger: TCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGCAGGTTTGCCTTTCCCCACGGACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310564.10
CDS TCA 72 bp AGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTaGCTCGTGTGGCAAACATCCAAGGCACTAGCCATG +
Preference number: 6 (lower is better)
Translates to: RKPSPGLRDSLE*LVWQTSKALAM
Trigger: CATGGCTAGTGCCTTGGATGTTTGCCACACGAGTCACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431651.5
CDS TCA 72 bp TCTGCCAAGGTGACATGTGAGACTGGAGGGATCATTTaGAAACCAGGGGAAGGGCACGCCAAACACGCCAAG +
Preference number: 6 (lower is better)
Translates to: SAKVTCETGGII*KPGEGHAKHAK
Trigger: CTTGGCGTGTTTGGCGTGCCCTTCCCCTGGTTTTCAAATGATCCCTCCAGTCTCACATGTCACCTTGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478504.1
CDS TCA 72 bp GGCAGTGAAGAACGGCACCTCTGCCAAGGTGACATGTaGGACTGGAGGGATCATTTGAAAACCAGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GSEERHLCQGDM*DWRDHLKTRGR
Trigger: CCTTCCCCTGGTTTTCAAATGATCCCTCCAGTCTCACATGTCACCTTGGCAGAGGTGCCGTTCTTCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478504.1
CDS GCA 72 bp GAGATTCAACCATTCAACCCAGGCAGTCGGCTGCAGTaGCCAGGTCTCACCGACTTAGCAGCCTCTTTGAAT +
Preference number: 6 (lower is better)
Translates to: EIQPFNPGSRLQ*PGLTDLAASLN
Trigger: ATTCAAAGAGGCTGCTAAGTCGGTGAGACCTGGGCACTGCAGCCGACTGCCTGGGTTGAATGGTTGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451651.5
CDS CAA 72 bp GGTGTGCACAAGGGAGAACCGCAGACAGCAAGTGCTTaGACCACAGCACAAACACAGGGCCAATCAACAGGA +
Preference number: 6 (lower is better)
Translates to: GVHKGEPQTASA*TTAQTQGQSTG
Trigger: TCCTGTTGATTGGCCCTGTGTTTGTGCTGTGGTCAAAGCACTTGCTGTCTGCGGTTCTCCCTTGTGCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS CAA 90 bp CCAAAGCACAGGCAGGCAGTGTTTTGCAGGGATGTGCAGATGACCTaGGGCCTTGACCTCATGCAGACCCTTTCTGCTTCACCTCATTTC +
Preference number: 6 (lower is better)
Translates to: PKHRQAVFCRDVQMT*GLDLMQTLSASPHF
Trigger: GAAATGAGGTGAAGCAGAAAGGGTCTGCATGAGGTCAAGGCCCAAGGTCATCTGCACATCCCTGCAAAACACTGCCTGCCTGTGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS TCA 72 bp AGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTaGCTCGTGTGGCAAACATCCTGTGAGCAACAGAAG +
Preference number: 6 (lower is better)
Translates to: RKPSPGLRDSLE*LVWQTSCEQQK
Trigger: CTTCTGTTGCTCACAGGATGTTTGCCACACGAGTCACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310564.10
ENST00000418140.5
ENST00000446564.5
ENST00000448704.5
ENST00000451651.5
ENST00000470156.1
CDS TCA 72 bp ACACGGCTTCCTATCTGCTCAATAGACAGGGAAGCTTaGGGAGCTACAAGGTCCAGAGTGTCCGTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: TRLPICSIDREA*GATRSRVSVGK
Trigger: TTTCCCCACGGACACTCTGGACCTTGTAGCTCCTCAAGCTTCCCTGTCTATTGAGCAGATAGGAAGCCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310564.10
CDS GCA 72 bp GGGCTAGCAGCAGCCTGGTTAGTGCAACCAGACATATaGACCAAGAGAGGAAGTAACACTCAGGAAGTGGTC +
Preference number: 6 (lower is better)
Translates to: GLAAAWLVQPDI*TKRGSNTQEVV
Trigger: GACCACTTCCTGAGTGTTACTTCCTCTCTTGGTGCATATGTCTGGTTGCACTAACCAGGCTGCTGCTAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS GCA 72 bp CAGACTCAAAAACCAAAGCACAGGCAGGCAGTGTTTTaGAGGGATGTGCAGATGACCTTGGGCCTTGACCTC +
Preference number: 6 (lower is better)
Translates to: QTQKPKHRQAVF*RDVQMTLGLDL
Trigger: GAGGTCAAGGCCCAAGGTCATCTGCACATCCCTGCAAAACACTGCCTGCCTGTGCTTTGGTTTTTGAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS CAA 72 bp CCAAGAGAGGAAGTAACACTCAGGAAGTGGTCAACCTaGCTGCAGGGCATCAGCGGAGGTTTCACAGAGGAA +
Preference number: 6 (lower is better)
Translates to: PREEVTLRKWST*LQGISGGFTEE
Trigger: TTCCTCTGTGAAACCTCCGCTGATGCCCTGCAGCAAGGTTGACCACTTCCTGAGTGTTACTTCCTCTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS GCA 72 bp AAGAGGAGGCCAGGCAAGAGGGCAGGGTCTTCATCATaGAGGTTTTGTAGGTATGGTAGGGAGTCTGGATTT +
Preference number: 6 (lower is better)
Translates to: KRRPGKRAGSSS*RFCRYGRESGF
Trigger: AAATCCAGACTCCCTACCATACCTACAAAACCTGCATGATGAAGACCCTGCCCTCTTGCCTGGCCTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478504.1
CDS CCA 72 bp ACATATGCACCAAGAGAGGAAGTAACACTCAGGAAGTaGTCAACCTTGCTGCAGGGCATCAGCGGAGGTTTC +
Preference number: 6 (lower is better)
Translates to: TYAPREEVTLRK*STLLQGISGGF
Trigger: GAAACCTCCGCTGATGCCCTGCAGCAAGGTTGACCACTTCCTGAGTGTTACTTCCTCTCTTGGTGCATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS TCA 72 bp AGTGTTTTGCAGGGATGTGCAGATGACCTTGGGCCTTaGCCTCATGCAGACCCTTTCTGCTTCACCTCATTT +
Preference number: 6 (lower is better)
Translates to: SVLQGCADDLGP*PHADPFCFTSF
Trigger: AAATGAGGTGAAGCAGAAAGGGTCTGCATGAGGTCAAGGCCCAAGGTCATCTGCACATCCCTGCAAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS CCA 72 bp AATTTGCACAAAGGTGCCTTTGGGCTAGCAGCAGCCTaGTTAGTGCAACCAGACATATGCACCAAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: NLHKGAFGLAAA*LVQPDICTKRG
Trigger: TCCTCTCTTGGTGCATATGTCTGGTTGCACTAACCAGGCTGCTGCTAGCCCAAAGGCACCTTTGTGCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS CCA 72 bp ACCACAGCACAAACACAGGGCCAATCAACAGGAGGCTaGACCTGCAGAAGCAAGATGCTAGCAATAAAAGCT +
Preference number: 6 (lower is better)
Translates to: TTAQTQGQSTGG*TCRSKMLAIKA
Trigger: AGCTTTTATTGCTAGCATCTTGCTTCTGCAGGTCCAGCCTCCTGTTGATTGGCCCTGTGTTTGTGCTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS CCA 72 bp CGGGAAAGTAAATCTGAACCACTAGTTCCACATGGCTaGGGAGGCCTCAGGAAACTTCCAATCATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: RESKSEPLVPHG*GGLRKLPIMAE
Trigger: TTCTGCCATGATTGGAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACTAGTGGTTCAGATTTACTTTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431651.5
CDS CAA 90 bp ACATATGCACCAAGAGAGGAAGTAACACTCAGGAAGTGGTCAACCTaGCTGCAGGGCATCAGCGGAGGTTTCACAGAGGAAGTTTACCTT +
Preference number: 6 (lower is better)
Translates to: TYAPREEVTLRKWST*LQGISGGFTEEVYL
Trigger: AAGGTAAACTTCCTCTGTGAAACCTCCGCTGATGCCCTGCAGCAAGGTTGACCACTTCCTGAGTGTTACTTCCTCTCTTGGTGCATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS TCA 72 bp ACAAACAAAGGCAGAGTGAGCAGAAACAAGAACTGCTaGAGTGTAAAGCGCAGGAGAGAAGCCACAGGAAGC +
Preference number: 6 (lower is better)
Translates to: TNKGRVSRNKNC*SVKRRREATGS
Trigger: GCTTCCTGTGGCTTCTCTCCTGCGCTTTACACTTCAGCAGTTCTTGTTTCTGCTCACTCTGCCTTTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS CAA 72 bp TTGAAGAAGGGATGGGGATGGTTGTCTTTTTCTAATTaGCACAAAGGTGCCTTTGGGCTAGCAGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: LKKGWGWLSFSN*HKGAFGLAAAW
Trigger: CCAGGCTGCTGCTAGCCCAAAGGCACCTTTGTGCAAATTAGAAAAAGACAACCATCCCCATCCCTTCTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS CAA 90 bp CTATTGTCTAACTCGAGAATACCCTGGCAGGTTCTAGTGGGGAACTaGGCCCTGGAACATTCCATTACCTTTTGCCACATCATAGCACAA +
Preference number: 6 (lower is better)
Translates to: LLSNSRIPWQVLVGN*ALEHSITFCHIIAQ
Trigger: TTGTGCTATGATGTGGCAAAAGGTAATGGAATGTTCCAGGGCCAAGTTCCCCACTAGAACCTGCCAGGGTATTCTCGAGTTAGACAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS CAA 90 bp AGACCAGGAGAAGCCCATAACTATTCAGGGAGTGACTTTCTTCTATaGTCTAACTCGAGAATACCCTGGCAGGTTCTAGTGGGGAACTTG +
Preference number: 6 (lower is better)
Translates to: RPGEAHNYSGSDFLL*SNSRIPWQVLVGNL
Trigger: CAAGTTCCCCACTAGAACCTGCCAGGGTATTCTCGAGTTAGACAATAGAAGAAAGTCACTCCCTGAATAGTTATGGGCTTCTCCTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420441.1
ENST00000448704.5
CDS GCA 72 bp CTGGGATTCAAATTCATGCAGTCTGGCTCCAGCATCTaGTCTTTCAACCACTGTGGTACACGAGCTTTAAGA +
Preference number: 6 (lower is better)
Translates to: LGFKFMQSGSSI*SFNHCGTRALR
Trigger: TCTTAAAGCTCGTGTACCACAGTGGTTGAAAGAGCAGATGCTGGAGCCAGACTGCATGAATTTGAATCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395879.5
CDS CCA 72 bp AAAATCATCAAAGGCAAGTTGTCAGTTCCACATGGCTaGGGAGGCCTCAGGAAACTTCCAATCATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: KIIKGKLSVPHG*GGLRKLPIMAE
Trigger: TTCTGCCATGATTGGAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACTGACAACTTGCCTTTGATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438444.5
CDS GCA 72 bp CATGGACATTCTAGTTTAAGTGGGCTACCAGATGACTaGAGTACCAGCAGAACATCCATGGGACAAAAGAAC +
Preference number: 6 (lower is better)
Translates to: HGHSSLSGLPDD*STSRTSMGQKN
Trigger: GTTCTTTTGTCCCATGGATGTTCTGCTGGTACTGCAGTCATCTGGTAGCCCACTTAAACTAGAATGTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431651.5
CDS CCA 72 bp TTCCATTTGGCAAGGAGGACTCCTATGTCAATGCTCTaGGTACTTCCAATGATCGCTCAAAAGTCCACTGTT +
Preference number: 6 (lower is better)
Translates to: FHLARRTPMSML*VLPMIAQKSTV
Trigger: AACAGTGGACTTTTGAGCGATCATTGGAAGTACCCAGAGCATTGACATAGGAGTCCTCCTTGCCAAATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488813.1
CDS GCA 72 bp CAAGTTGTCTGTCATTCACTAGGCATTTCCTCAAGGTaGCACATATTTGACACGGCTTCCTATCTGCTCAAT +
Preference number: 6 (lower is better)
Translates to: QVVCHSLGISSR*HIFDTASYLLN
Trigger: ATTGAGCAGATAGGAAGCCGTGTCAAATATGTGGCACCTTGAGGAAATGCCTAGTGAATGACAGACAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310564.10
CDS CAA 90 bp GTGAAATCTGTGGATGGACGAATAATTAAGGCCATCTACTCTAAATaGTCCATTTTACAGACTCAAAAACCAAAGCACAGGCAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: VKSVDGRIIKAIYSK*SILQTQKPKHRQAV
Trigger: CACTGCCTGCCTGTGCTTTGGTTTTTGAGTCTGTAAAATGGACAATTTAGAGTAGATGGCCTTAATTATTCGTCCATCCACAGATTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS CAA 72 bp ATTCACTGTTTTAAAGAGGGACCTATTGCCAGGAAATaGGTACATATTTTGACCTGGACCCTAAAGAACAGG +
Preference number: 6 (lower is better)
Translates to: IHCFKEGPIARK*VHILTWTLKNR
Trigger: CCTGTTCTTTAGGGTCCAGGTCAAAATATGTACCAATTTCCTGGCAATAGGTCCCTCTTTAAAACAGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488813.1
CDS CAA 72 bp GTGGATGGACGAATAATTAAGGCCATCTACTCTAAATaGTCCATTTTACAGACTCAAAAACCAAAGCACAGG +
Preference number: 6 (lower is better)
Translates to: VDGRIIKAIYSK*SILQTQKPKHR
Trigger: CCTGTGCTTTGGTTTTTGAGTCTGTAAAATGGACAATTTAGAGTAGATGGCCTTAATTATTCGTCCATCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490251.1
CDS TCA 72 bp CAGTTTGCCAACAGTTGGAAGTACTATAAAGTATCTTaGAGAAGGGATGGGGATGGTTGTCTTTTTCTAATT +
Preference number: 6 (lower is better)
Translates to: QFANSWKYYKVS*RRDGDGCLFLI
Trigger: AATTAGAAAAAGACAACCATCCCCATCCCTTCTTCAAGATACTTTATAGTACTTCCAACTGTTGGCAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395879.5