RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTNAP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000152910

Ensembl transcript IDs: ENST00000307431.12, ENST00000377504.8, ENST00000463177.1, ENST00000471618.5, ENST00000476707.1, ENST00000478060.5, ENST00000611870.5, ENST00000619533.1, ENST00000622250.4

Found 625 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATaGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCA +
Preference number: 1 (lower is better)
Translates to: WTRLPGATPSLYMAR*QCCKPTACTFSVRA
Trigger: TGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR CCA 90 bp TATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATaGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTG +
Preference number: 1 (lower is better)
Translates to: YITGRGFLEPPQACT*QDGSAASPLPVHSV
Trigger: CACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR GCA 90 bp AGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTaGTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTT +
Preference number: 1 (lower is better)
Translates to: RLPGATPSLYMARWQ*CKPTACTFSVRAFV
Trigger: AACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR CCA 90 bp CATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTaGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAA +
Preference number: 1 (lower is better)
Translates to: HRMNAMRNISLDEAS*SHPKPVHGKMAVLQ
Trigger: TTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR CCA 90 bp ATTGAATATAATACAGAGAAAGGCAAAGGGGCTTTATTATGCTTGTaGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGC +
Preference number: 1 (lower is better)
Translates to: IEYNTEKGKGALLCL*PLKMQTPATQDLRS
Trigger: GCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCATAATAAAGCCCCTTTGCCTTTCTCTGTATTATATTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
3UTR GCA 90 bp TATTGTATTGAATATAATACAGAGAAAGGCAAAGGGGCTTTATTATaGTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTG +
Preference number: 1 (lower is better)
Translates to: YCIEYNTEKGKGALL*LWPLKMQTPATQDL
Trigger: CAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCATAATAAAGCCCCTTTGCCTTTCTCTGTATTATATTCAATACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
3UTR CCA 90 bp GTAATTTTTGAGAAATTCACCCCATCGTTTCAGACGAGAAGTGTCTaGAATGACAAATTCACAGTAGATCATTTAATATGCTATCTCCCC +
Preference number: 1 (lower is better)
Translates to: VIFEKFTPSFQTRSV*NDKFTVDHLICYLP
Trigger: GGGGAGATAGCATATTAAATGATCTACTGTGAATTTGTCATTCCAGACACTTCTCGTCTGAAACGATGGGGTGAATTTCTCAAAAATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR TCA 90 bp TGTATAATACACCCTAATCAGAATGTACCATTCAGCAAGTTGGATTaGTTCTTGGTAATTTTTGAGAAATTCACCCCATCGTTTCAGACG +
Preference number: 1 (lower is better)
Translates to: CIIHPNQNVPFSKLD*FLVIFEKFTPSFQT
Trigger: CGTCTGAAACGATGGGGTGAATTTCTCAAAAATTACCAAGAATCAATCCAACTTGCTGAATGGTACATTCTGATTAGGGTGTATTATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR GCA 90 bp CAGCTACCAATGAGGTTAATACCGCTACTAAATAACATGAACATCTaGAAAAGATTCAGAGATATAATGATGTTTGCACTCAGCTTTGCA +
Preference number: 1 (lower is better)
Translates to: QLPMRLIPLLNNMNI*KRFRDIMMFALSFA
Trigger: TGCAAAGCTGAGTGCAAACATCATTATATCTCTGAATCTTTTGCAGATGTTCATGTTATTTAGTAGCGGTATTAACCTCATTGGTAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR GCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTATGGCAAGATGGCAGTaGTGCAAGCCCACTGCCTGT +
Preference number: 2 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIMARWQ*CKPTAC
Trigger: ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCAT...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
3UTR-3UTR CCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTCCCCAAGCCTGTACATaGCAAGATGGCAGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIPQACT*QDGSAA
Trigger: TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
3UTR-3UTR TCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCATTCGTTTTTCCATTaGGAACCCCTGGCTATTAAA +
Preference number: 2 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHHSFFH*EPLAIK
Trigger: TTTAATAGCCAGGGGTTCTCAATGGAAAAACGAATG...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR-3UTR CCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTCTGTACATGGCAAGATaGCAGTGCTGCAAGCCCACT +
Preference number: 2 (lower is better)
Translates to: CLWPLKMQTPATQDLRSILYMAR*QCCKPT
Trigger: AGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAG...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
3UTR-3UTR TCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACATTCGTTTTTCCATTaGGAACCCCTGGCTATTAAA +
Preference number: 2 (lower is better)
Translates to: FLEPPQACTWQDGSAASPHSFFH*EPLAIK
Trigger: TTTAATAGCCAGGGGTTCTCAATGGAAAAACGAATG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR-3UTR CCA 90 bp TTTTTGAGAAATTCACCCCATCGTTTCAGACGAGAAGTGTCTGGAATGACAAATCTGGACGAGGCTTCCTaGAGCCACCCCAAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: FLRNSPHRFRREVSGMTNLDEAS*SHPKPV
Trigger: TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAG...ATTTGTCATTCCAGACACTTCTCGTCTGAAACGATGGGGTGAATTTCTCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR CCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCCCCCAAGCCTGTACATaGCAAGATGGCAGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: FLFHRMNAMRNISLDEASPQACT*QDGSAA
Trigger: TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR-3UTR CCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTAACTTATGTATTACATaGTTAAGAGACCAAGGCTAC +
Preference number: 2 (lower is better)
Translates to: CLWPLKMQTPATQDLRSINLCIT*LRDQGY
Trigger: GTAGCCTTGGTCTCTTAACCATGTAATACATAAGTT...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
3UTR CAA 90 bp TGTATTGAATATAATACAGAGAAAGGCAAAGGGGCTTTATTATGCTaGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGA +
Preference number: 2 (lower is better)
Translates to: CIEYNTEKGKGALLC*WPLKMQTPATQDLR
Trigger: TCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCATAATAAAGCCCCTTTGCCTTTCTCTGTATTATATTCAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
3UTR-3UTR GCA 90 bp TTTTTGAGAAATTCACCCCATCGTTTCAGACGAGAAGTGTCTGGAATGACAAATGTGCTGCAAGCCCACTaGCTGTACATTCAGTGTAAG +
Preference number: 2 (lower is better)
Translates to: FLRNSPHRFRREVSGMTNVLQAH*LYIQCK
Trigger: CTTACACTGAATGTACAGGCAGTGGGCTTGCAGCAC...ATTTGTCATTCCAGACACTTCTCGTCTGAAACGATGGGGTGAATTTCTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR CCA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACCTGTACATGGCAAGATaGCAGTGCTGCAAGCCCACT +
Preference number: 2 (lower is better)
Translates to: LKTFYILWETGITQGLKYLYMAR*QCCKPT
Trigger: AGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAG...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR TCA 90 bp AACAGTTTAGTTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGGCATTTCCAGGTCTATaGATAACACCACGAGGAGAC +
Preference number: 2 (lower is better)
Translates to: NSLVENILHSLGNWHYSGAFPGL*ITPRGD
Trigger: GTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGC...CCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAACTAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR TCA 90 bp ACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACTGTCACCATTCGTTTTTCCATTaGGAACCCCTGGCTATTAAA +
Preference number: 2 (lower is better)
Translates to: TFYILWETGITQGLKYCHHSFFH*EPLAIK
Trigger: TTTAATAGCCAGGGGTTCTCAATGGAAAAACGAATG...GTGACAGTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR CCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGTCAAAAAGTATGTACTaGAAGTCTATGCACAGCAAA +
Preference number: 2 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVSKSMY*KSMHSK
Trigger: TTTGCTGTGCATAGACTTCCAGTACATACTTTTTGA...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR CCA 90 bp TCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTACATTTTACATTCTTTaGGAAACTGGCATTACTCAG +
Preference number: 2 (lower is better)
Translates to: SGVDKLRNPIVTWEALEGTFYIL*ETGITQ
Trigger: CTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGT...ACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR TCA 90 bp TTTCAGACGAGAAGTGTCTGGAATGACAAATTCACAGTAGATCATTTAATATGCGATTGTGTAGATCACTaGTGGTTGCAGCTCATATTT +
Preference number: 2 (lower is better)
Translates to: FQTRSVWNDKFTVDHLICDCVDH*WLQLIF
Trigger: AAATATGAGCTGCAACCATCAGTGATCTACACAATC...GCATATTAAATGATCTACTGTGAATTTGTCATTCCAGACACTTCTCGTCTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR-3UTR TCA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACTTCAGAGTTGAAGTCTaGGACTCAAAACCAAATGTA +
Preference number: 2 (lower is better)
Translates to: LKTFYILWETGITQGLKYFRVEV*DSKPNV
Trigger: TACATTTGGTTTTGAGTCTCAGACTTCAACTCTGAA...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR CCA 72 bp GGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATaGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTA +
Preference number: 3 (lower is better)
Translates to: GRGFLEPPQACT*QDGSAASPLPV
Trigger: TACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR CCA 72 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATaGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGT +
Preference number: 3 (lower is better)
Translates to: LPGATPSLYMAR*QCCKPTACTFS
Trigger: ACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR GCA 72 bp GGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTaGTGCAAGCCCACTGCCTGTACATTCAGTGTAAGA +
Preference number: 3 (lower is better)
Translates to: GATPSLYMARWQ*CKPTACTFSVR
Trigger: TCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR GCA 72 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTaGCTGTACATTCAGTGTAAGAGCATTCGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: PVHGKMAVLQAH*LYIQCKSIRFS
Trigger: GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR CCA 72 bp AATGCTATGAGAAATATATCACTGGACGAGGCTTCCTaGAGCCACCCCAAGCCTGTACATGGCAAGATGGCA +
Preference number: 3 (lower is better)
Translates to: NAMRNISLDEAS*SHPKPVHGKMA
Trigger: TGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
3UTR-3UTR CAA 90 bp CTCCCTAGAGTTCAGCTACCAATGAGGTTAATACCGCTACTAAATAACATGAACAATAGAGTGCCTTTATaGTATGATTGGCTTGCAGAA +
Preference number: 3 (lower is better)
Translates to: LPRVQLPMRLIPLLNNMNNRVPL*YDWLAE
Trigger: TTCTGCAAGCCAATCATACAATAAAGGCACTCTATT...GTTCATGTTATTTAGTAGCGGTATTAACCTCATTGGTAGCTGAACTCTAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR CCA 72 bp GAGAAATTCACCCCATCGTTTCAGACGAGAAGTGTCTaGAATGACAAATTCACAGTAGATCATTTAATATGC +
Preference number: 3 (lower is better)
Translates to: EKFTPSFQTRSV*NDKFTVDHLIC
Trigger: GCATATTAAATGATCTACTGTGAATTTGTCATTCCAGACACTTCTCGTCTGAAACGATGGGGTGAATTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR TCA 72 bp TGCTATCTCCCCTTAGAGTGTGCATTGTTTAATTATTaGTTGTGTAGATCACTGATGGTTGCAGCTCATATT +
Preference number: 3 (lower is better)
Translates to: CYLPLECALFNY*LCRSLMVAAHI
Trigger: AATATGAGCTGCAACCATCAGTGATCTACACAATCAATAATTAAACAATGCACACTCTAAGGGGAGATAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
3UTR TCA 72 bp ATTCACCCCATCGTTTCAGACGAGAAGTGTCTGGAATaGCAAATTCACAGTAGATCATTTAATATGCTATCT +
Preference number: 3 (lower is better)
Translates to: IHPIVSDEKCLE*QIHSRSFNMLS
Trigger: AGATAGCATATTAAATGATCTACTGTGAATTTGTCATTCCAGACACTTCTCGTCTGAAACGATGGGGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCGAGGGGCCACGTGGCTaGGCTGCACTGCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASEGPRG*AALQRG
Trigger: GCCTCTCTGCAGTGCAGCTCAGCCACGTGGCCCCTC...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGAGGGGCCACGTGGCTaGGCTGCACTGCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAEGPRG*AALQRG
Trigger: GCCTCTCTGCAGTGCAGCTCAGCCACGTGGCCCCTC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCGAGGGGCCACGTGGCTaGGCTGCACTGCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCEGPRG*AALQRG
Trigger: GCCTCTCTGCAGTGCAGCTCAGCCACGTGGCCCCTC...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAGAGGGGCCACGTGGCTaGGCTGCACTGCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPEGPRG*AALQRG
Trigger: GCCTCTCTGCAGTGCAGCTCAGCCACGTGGCCCCTC...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGCTGGGGTGCAGAGCTaGCTTCAGAGGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAAGVQS*LQRGHV
Trigger: CACGTGGCCCCTCTGAAGGCAGCTCTGCACCCCAGC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGCTGTAACAGGACATaGCCATCAGCGGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCSCNRT*PSAGAG
Trigger: GCCCGCCCCCGCTGATGGGCATGTCCTGTTACAGCT...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCATCTGGGTGGCTGGGGTaGAGAGCTGCCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAASGWLG*RAAFRG
Trigger: CCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGA...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCGCAGCAGAAGCCATCTaGCCGTCCACCGCCACACTC +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCAAEAI*PSTATL
Trigger: GAGTGTGGCGGTGGACGGCCAGATGGCTTCTGCTGC...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGCAGCAGAAGCCATCTaGCCGTCCACCGCCACACTC +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACAAEAI*PSTATL
Trigger: GAGTGTGGCGGTGGACGGCCAGATGGCTTCTGCTGC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCGCAGCAGAAGCCATCTaGCCGTCCACCGCCACACTC +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCAAEAI*PSTATL
Trigger: GAGTGTGGCGGTGGACGGCCAGATGGCTTCTGCTGC...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCAGGGTCTGGGTGGCTaGGGTGCAGAGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHQGLGG*GAELPS
Trigger: TGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTG...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCACTACCATATCCCCCTTaGGTGGCCACAGCGGTGACC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAALPYPP*VATAVT
Trigger: GGTCACCGCTGTGGCCACTCAAGGGGGATATGGTAG...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCTACCATATCCCCCTTaGGTGGCCACAGCGGTGACC +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASLPYPP*VATAVT
Trigger: GGTCACCGCTGTGGCCACTCAAGGGGGATATGGTAG...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGAAGCCCTGCGCACCTaGCAGTGCAGTATCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAEALRT*QCSILV
Trigger: GACCAGGATACTGCACTGGCAGGTGCGCAGGGCTTC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATGCTGGGGTGCAGAGCTaGCTTCAGAGGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHAGVQS*LQRGHV
Trigger: CACGTGGCCCCTCTGAAGGCAGCTCTGCACCCCAGC...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCTGGACGAGGCTTCCTaGAGCCACCCCAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASLDEAS*SHPKPV
Trigger: TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAG...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGCTCGGAAGAACTGCTaGAGGATGCCTGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACARKNC*RMPEAR
Trigger: CCTTGCCTCAGGCATCCTTCAGCAGTTCTTCCGAGC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTCTGCGCACCTGCCAGTaGAGTATCCTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACLRTCQ*SILVHI
Trigger: GATGTGGACCAGGATACTGCACTGGCAGGTGCGCAG...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGCGCACCTGCCAGTaGAGTATCCTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCLRTCQ*SILVHI
Trigger: GATGTGGACCAGGATACTGCACTGGCAGGTGCGCAG...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCTGGGTGGCTGGGGTaGAGAGCTGCCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHSGWLG*RAAFRG
Trigger: CCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGA...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCTCTGCCAGCTCTGTCTaGGTCTTCAGCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASSASSV*VFSPSR
Trigger: CCTAGAGGGGCTGAAGACCCAGACAGAGCTGGCAGA...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTAAGGTGCTCCAGGACTaGGAACACTCCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACKVLQD*EHSPPC
Trigger: ACACGGTGGGGAGTGTTCCCAGTCCTGGAGCACCTT...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAAGGTGCTCCAGGACTaGGAACACTCCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAKVLQD*EHSPPC
Trigger: ACACGGTGGGGAGTGTTCCCAGTCCTGGAGCACCTT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCGCTGGGCCATACAGCTaGACTCAGTCACGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASAGPYS*TQSRVL
Trigger: CAGGACACGTGACTGAGTCCAGCTGTATGGCCCAGC...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGCAAATCCAGGACCATaGCTGCTGGAGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAANPGP*LLESSE
Trigger: TTCCGAGCTCTCCAGCAGTCATGGTCCTGGATTTGC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACACTACCATATCCCCCTTaGGTGGCCACAGCGGTGACC +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTLPYPP*VATAVT
Trigger: GGTCACCGCTGTGGCCACTCAAGGGGGATATGGTAG...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTCCCCGTGCATGGAAATaGTGCCTGTGTTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACPRAWK*CLCSST
Trigger: AGTGGACGAACACAGGCATCATTTCCATGCACGGGG...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCGCACCTGCCAGTaGAGTATCCTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPLRTCQ*SILVHI
Trigger: GATGTGGACCAGGATACTGCACTGGCAGGTGCGCAG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTTTGATGTGGCATCAGTaGCAGGCTGGGCCATACAGC +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACLMWHQ*QAGPYS
Trigger: GCTGTATGGCCCAGCCTGGCACTGATGCCACATCAA...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACGCAAGATGGCAGTGCTaGAAGCCCACTGCCTGTACA +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHARWQC*KPTACT
Trigger: TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGC...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCGCAAGATGGCAGTGCTaGAAGCCCACTGCCTGTACA +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPARWQC*KPTACT
Trigger: TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGC...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTATGGCAAGATGGCAGTaGTGCAAGCCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACMARWQ*CKPTAC
Trigger: ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCAT...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCATGGCAAGATGGCAGTaGTGCAAGCCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPMARWQ*CKPTAC
Trigger: ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCAT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCGGCGGGCTGTGTCTTTaGTGTCAGCTGATCCACTTG +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPGGLCL*CQLIHL
Trigger: CAAGTGGATCAGCTGACACCAAAGACACAGCCCGCC...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACGGCGGGCTGTGTCTTTaGTGTCAGCTGATCCACTTG +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHGGLCL*CQLIHL
Trigger: CAAGTGGATCAGCTGACACCAAAGACACAGCCCGCC...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCTCCTTTCCCTTGATGTaGCATCAGTGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCSFPLM*HQCQAG
Trigger: CCCAGCCTGGCACTGATGCCACATCAAGGGAAAGGA...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCCCCAAGCCTGTACATaGCAAGATGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHPQACT*QDGSAA
Trigger: TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACACTGGACGAGGCTTCCTaGAGCCACCCCAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTLDEAS*SHPKPV
Trigger: TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAG...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCATCACACACACCTCCCTaGCTCCTCACTGAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAASHTPP*LLTEKH
Trigger: GTGCTTTTCAGTGAGGAGTCAGGGAGGTGTGTGTGA...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCTGCCCAAACGCTGGATaGGCACTGAATGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASCPNAG*ALNANA
Trigger: AGCATTGGCATTCAGTGCTCATCCAGCGTTTGGGCA...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTTGCCCAAACGCTGGATaGGCACTGAATGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACCPNAG*ALNANA
Trigger: AGCATTGGCATTCAGTGCTCATCCAGCGTTTGGGCA...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCCCGTGCATGGAAATaGTGCCTGTGTTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPPRAWK*CLCSST
Trigger: AGTGGACGAACACAGGCATCATTTCCATGCACGGGG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTCTATCTGAAGGTCACTaGAGTTCCCAAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACLSEGH*SSQGTP
Trigger: AGGGGTCCCTTGGGAACTTCAGTGACCTTCAGATAG...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCCTATCTGAAGGTCACTaGAGTTCCCAAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCLSEGH*SSQGTP
Trigger: AGGGGTCCCTTGGGAACTTCAGTGACCTTCAGATAG...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCGAAGAGCTGACTGTTaGGCTGTAACAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCRRADC*AVTGHA
Trigger: GGCATGTCCTGTTACAGCTCAACAGTCAGCTCTTCG...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCACGAAGAGCTGACTGTTaGGCTGTAACAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAARRADC*AVTGHA
Trigger: GGCATGTCCTGTTACAGCTCAACAGTCAGCTCTTCG...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCGGCCACACAGGATCTaGGAAGCATTTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASRPHRI*EAFPGL
Trigger: TAGACCTGGAAATGCTTCTCAGATCCTGTGTGGCCG...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAGCTGTAACAGGACATaGCCATCAGCGGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCSCNRT*PSAGAG
Trigger: GCCCGCCCCCGCTGATGGGCATGTCCTGTTACAGCT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACAGGACCATGACTGCTaGAGAGCTCGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPQDHDC*RARKNC
Trigger: GCAGTTCTTCCGAGCTCTCCAGCAGTCATGGTCCTG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCTGGTTGTCGTTGAAGTaGGTGGGTGACTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASWLSLK*VGDCTE
Trigger: CTCAGTGCAGTCACCCACCCACTTCAACGACAACCA...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCATGTCCCCTACAACCTaGCTGCACTTCTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPMSPTT*LHFWSH
Trigger: GTGACTCCAGAAGTGCAGCCAGGTTGTAGGGGACAT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCAGGGTCTGGGTGGCTaGGGTGCAGAGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCQGLGG*GAELPS
Trigger: TGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATGCTGGGCCATACAGCTaGACTCAGTCACGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHAGPYS*TQSRVL
Trigger: CAGGACACGTGACTGAGTCCAGCTGTATGGCCCAGC...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCACTGTACATGGCAAGATaGCAGTGCTGCAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAALYMAR*QCCKPT
Trigger: AGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAG...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATCCCCCAAAAGATCTTaGGAGGCTCTCAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTSPKRS*EALRAL
Trigger: GAGCGCTCTGAGAGCCTCTCAAGATCTTTTGGGGGA...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACACGCTGGATGAGCACTaGATGCCAATGCTGATCATC +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHTLDEH*MPMLII
Trigger: GATGATCAGCATTGGCATTCAGTGCTCATCCAGCGT...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCCCCCTGAAATCAGCTaGAGTTCACTGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHPPEIS*SSLNSR
Trigger: TCTGCTGTTCAGTGAACTTCAGCTGATTTCAGGGGG...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCGAGGAGGATACCCCCTaGAATCAGCTGAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCEEDTP*NQLKFT
Trigger: AGTGAACTTCAGCTGATTTCAGGGGGTATCCTCCTC...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTATCTGAAGGTCACTaGAGTTCCCAAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPLSEGH*SSQGTP
Trigger: AGGGGTCCCTTGGGAACTTCAGTGACCTTCAGATAG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACACGGTTAATAGTGGCCTaGAGTTGCTCCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTRLIVA*SCSMLA
Trigger: GGCCAGCATGGAGCAACTTCAGGCCACTATTAACCG...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCATATCACCATGAAATaGAGCAGCGTGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHHITMK*SSVGAG
Trigger: TCCAGCTCCCACGCTGCTTCATTTCATGGTGATATG...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACGGCCACACAGGATCTaGGAAGCATTTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPRPHRI*EAFPGL
Trigger: TAGACCTGGAAATGCTTCTCAGATCCTGTGTGGCCG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCCTGTTCACAGTGCTCTaGACGGTTAATAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCLFTVL*TVNSGL
Trigger: CAGGCCACTATTAACCGTGCAGAGCACTGTGAACAG...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAGAGGGGTTCCATCTTaGTTATTGACCAGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPRGVPS*LLTSRD
Trigger: GTCACGGCTGGTCAATAAGCAAGATGGAACCCCTCT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCAGAGGGGTTCCATCTTaGTTATTGACCAGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCRGVPS*LLTSRD
Trigger: GTCACGGCTGGTCAATAAGCAAGATGGAACCCCTCT...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTCAACCCTCACATGGTaGCACTGGTTGTCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHSTLTW*HWLSLK
Trigger: CTTCAACGACAACCAGTGGCACCATGTGAGGGTTGA...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCACTTCCCATAGCTGCTaGAATGTCCCCTACAACCTG +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCTSHSC*NVPYNL
Trigger: CAGGTTGTAGGGGACATTGCAGCAGCTATGGGAAGT...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCGCTGGGGTGCAGAGCTaGCTTCAGAGGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSAGVQS*LQRGHV
Trigger: CACGTGGCCCCTCTGAAGGCAGCTCTGCACCCCAGC...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCGTGCTGCAAGCCCACTaGCTGTACATTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCVLQAH*LYIQCK
Trigger: CTTACACTGAATGTACAGGCAGTGGGCTTGCAGCAC...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCGTGCTGCAAGCCCACTaGCTGTACATTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCVLQAH*LYIQCK
Trigger: CTTACACTGAATGTACAGGCAGTGGGCTTGCAGCAC...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGTGCTGCAAGCCCACTaGCTGTACATTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACVLQAH*LYIQCK
Trigger: CTTACACTGAATGTACAGGCAGTGGGCTTGCAGCAC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATCAGGACCATGACTGCTaGAGAGCTCGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHQDHDC*RARKNC
Trigger: GCAGTTCTTCCGAGCTCTCCAGCAGTCATGGTCCTG...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCTTTGGCCCTTCCCTGTaGAGTAGAATCCCATCACTC +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCFGPSL*SRIPSL
Trigger: GAGTGATGGGATTCTACTCCACAGGGAAGGGCCAAA...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATCCTTTCCCTTGATGTaGCATCAGTGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTSFPLM*HQCQAG
Trigger: CCCAGCCTGGCACTGATGCCACATCAAGGGAAAGGA...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTTCCCTGACTCCTCACTaGAAAGCACTCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACSLTPH*KALSIF
Trigger: AAAGATGCTGAGTGCTTTTCAGTGAGGAGTCAGGGA...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATCACACACACCTCCCTaGCTCCTCACTGAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTSHTPP*LLTEKH
Trigger: GTGCTTTTCAGTGAGGAGTCAGGGAGGTGTGTGTGA...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTGCTCGGAAGAACTGCTaGAGGATGCCTGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCARKNC*RMPEAR
Trigger: CCTTGCCTCAGGCATCCTTCAGCAGTTCTTCCGAGC...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCTCCATTCCAAAGGGATaGAGCGCAGAAATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASSIPKG*SAEIWL
Trigger: AAGCCAGATTTCTGCGCTTCATCCCTTTGGAATGGA...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAATTGCAGTGTGATGTaGTCTCCATTTGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPNCSVM*SPFGPS
Trigger: GGAAGGGCCAAATGGAGATCACATCACACTGCAATT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAGCCTCATACATCCCTaGAATCCACCAAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPSLIHP*NPPSGL
Trigger: AAGTCCACTTGGTGGATTTCAGGGATGTATGAGGCT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCTCATACATCCCTaGAATCCACCAAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAASLIHP*NPPSGL
Trigger: AAGTCCACTTGGTGGATTTCAGGGATGTATGAGGCT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCAGCCTCATACATCCCTaGAATCCACCAAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASSLIHP*NPPSGL
Trigger: AAGTCCACTTGGTGGATTTCAGGGATGTATGAGGCT...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCCACATGAGTCTATCTaGAGGTCACTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCPHESI*RSLKFP
Trigger: TGGGAACTTCAGTGACCTTCAGATAGACTCATGTGG...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACATGAGTCTATCTaGAGGTCACTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASPHESI*RSLKFP
Trigger: TGGGAACTTCAGTGACCTTCAGATAGACTCATGTGG...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTTTCCATCTTGCTTATTaGCCAGCCGTGACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACFHLAY*PAVTSC
Trigger: GCAAGAAGTCACGGCTGGTCAATAAGCAAGATGGAA...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATCGAAGAGCTGACTGTTaGGCTGTAACAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHRRADC*AVTGHA
Trigger: GGCATGTCCTGTTACAGCTCAACAGTCAGCTCTTCG...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACAGCTTCATATCACCATaGAATGAAGCAGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHSFISP*NEAAWE
Trigger: CTCCCACGCTGCTTCATTTCATGGTGATATGAAGCT...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCTTCGCATTCCAATTCTaGCCTTGGGGTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCFAFQF*PWGSIP
Trigger: TGGAATGGAACCCCAAGGGCAGAATTGGAATGCGAA...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCCCTGAAGTTGCTCCATaGTGGCCACATACTCGAAAA +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPPEVAP*WPHTRK
Trigger: TTTTCGAGTATGTGGCCAGCATGGAGCAACTTCAGG...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAAGAGGGGTTCCATCTTaGTTATTGACCAGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPRGVPS*LLTSRD
Trigger: GTCACGGCTGGTCAATAAGCAAGATGGAACCCCTCT...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAAGTGGGTGGGTGACTaGACTGAGATTTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAKWVGD*TEISKG
Trigger: GCCTTTTGAAATCTCAGTGCAGTCACCCACCCACTT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTAAGTGGGTGGGTGACTaGACTGAGATTTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACKWVGD*TEISKG
Trigger: GCCTTTTGAAATCTCAGTGCAGTCACCCACCCACTT...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCATCAACCCTCACATGGTaGCACTGGTTGTCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPSTLTW*HWLSLK
Trigger: CTTCAACGACAACCAGTGGCACCATGTGAGGGTTGA...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGAATGGCCCTGTGTATaGAGAGAAAGTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAEWPCV*RESAVT
Trigger: TGTGACTGCACTTTCTCTGCATACACAGGGCCATTC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTGAAGCCCTGCGCACCTaGCAGTGCAGTATCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIEALRT*QCSILV
Trigger: GACCAGGATACTGCACTGGCAGGTGCGCAGGGCTTC...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCGTGGCTGAGCTGCACTaGAGAGAGGCAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVVAELH*REAACE
Trigger: TTCACAGGCTGCCTCTCTGCAGTGCAGCTCAGCCAC...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTGTGGCTGAGCTGCACTaGAGAGAGGCAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCVAELH*REAACE
Trigger: TTCACAGGCTGCCTCTCTGCAGTGCAGCTCAGCCAC...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACAAGCGGTCCCACAAATTaGCAGCAGCATCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTSGPTN*QQHPSF
Trigger: GAAGGAAGGATGCTGCTGCCAATTTGTGGGACCGCT...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR CCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTTCCAATTCTGCCCTTaGGGTTCCATTCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHFQFCP*GSIPKG
Trigger: TCCCTTTGGAATGGAACCCCAAGGGCAGAATTGGAA...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCAAGGTGCTCCAGGACTaGGAACACTCCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVKVLQD*EHSPPC
Trigger: ACACGGTGGGGAGTGTTCCCAGTCCTGGAGCACCTT...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCGCAATCCAGTGTCATTaGTCCATTCATTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASAIQCH*SIHSGQ
Trigger: CTGACCGGAATGAATGGACCAATGACACTGGATTGC...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATGGTTGTCGTTGAAGTaGGTGGGTGACTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTWLSLK*VGDCTE
Trigger: CTCAGTGCAGTCACCCACCCACTTCAACGACAACCA...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATCTCACATGGTGCCACTaGTTGTCGTTGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHLTWCH*LSLKWV
Trigger: CACCCACTTCAACGACAACCAGTGGCACCATGTGAG...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACAATGTCCCCTACAACCTaGCTGCACTTCTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTMSPTT*LHFWSH
Trigger: GTGACTCCAGAAGTGCAGCCAGGTTGTAGGGGACAT...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTGCTGGGCCATACAGCTaGACTCAGTCACGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCAGPYS*TQSRVL
Trigger: CAGGACACGTGACTGAGTCCAGCTGTATGGCCCAGC...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCGCATCAGTGCCAGGCTaGGCCATACAGCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVASVPG*AIQLDS
Trigger: TGAGTCCAGCTGTATGGCCCAGCCTGGCACTGATGC...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAGCATCAGTGCCAGGCTaGGCCATACAGCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAASVPG*AIQLDS
Trigger: TGAGTCCAGCTGTATGGCCCAGCCTGGCACTGATGC...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCGCAAATCCAGGACCATaGCTGCTGGAGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVANPGP*LLESSE
Trigger: TTCCGAGCTCTCCAGCAGTCATGGTCCTGGATTTGC...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCTGCATTTGCATTTCCTaGAAAACCCCAGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCCICIS*KTPDAV
Trigger: GACAGCATCTGGGGTTTTTCAGGAAATGCAAATGCA...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATACGCTGGATGAGCACTaGATGCCAATGCTGATCATC +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHTLDEH*MPMLII
Trigger: GATGATCAGCATTGGCATTCAGTGCTCATCCAGCGT...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCACCCCGTGCATGGAAATaGTGCCTGTGTTCGTCCACT +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAPRAWK*CLCSST
Trigger: AGTGGACGAACACAGGCATCATTTCCATGCACGGGG...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACACCCCCTGAAATCAGCTaGAGTTCACTGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTPPEIS*SSLNSR
Trigger: TCTGCTGTTCAGTGAACTTCAGCTGATTTCAGGGGG...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACATTCGACACCTGCTGTaGTGTCACTGGGTAATTTTC +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHIRHLL*CHWVIF
Trigger: GAAAATTACCCAGTGACATCACAGCAGGTGTCGAAT...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCATTCGACACCTGCTGTaGTGTCACTGGGTAATTTTC +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASIRHLL*CHWVIF
Trigger: GAAAATTACCCAGTGACATCACAGCAGGTGTCGAAT...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAGGACCCCTGCTGAACTaGAATCAGATCTACCACTTT +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPGPLLN*NQIYHF
Trigger: AAAGTGGTAGATCTGATTTCAGTTCAGCAGGGGTCC...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCGGTTAATAGTGGCCTaGAGTTGCTCCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCRLIVA*SCSMLA
Trigger: GGCCAGCATGGAGCAACTTCAGGCCACTATTAACCG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCACGGTTAATAGTGGCCTaGAGTTGCTCCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMARLIVA*SCSMLA
Trigger: GGCCAGCATGGAGCAACTTCAGGCCACTATTAACCG...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGTGCCTGATGACAGGTaGACTTGTCTCCTTCTATTA +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACVPDDR*TCLLLL
Trigger: TAATAGAAGGAGACAAGTTCACCTGTCATCAGGCAC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTCTGAAAAACCCCAGATaGTGTCCTCTTGGCGATATT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACLKNPR*CPLGDI
Trigger: AATATCGCCAAGAGGACAGCATCTGGGGTTTTTCAG...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCATTCGCATTCCAATTCTaGCCTTGGGGTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPFAFQF*PWGSIP
Trigger: TGGAATGGAACCCCAAGGGCAGAATTGGAATGCGAA...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAATTGAATTCTCCCCGTaGATGGAAATGATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAIEFSP*MEMMPV
Trigger: CACAGGCATCATTTCCATGCACGGGGAGAATTCAAT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGAACAGCAGAAGCCCTaGCTTATTCCAAGTTCGAAA +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACEQQKP*LIPSSK
Trigger: TTTCGAACTTGGAATAAGGCAGGGCTTCTGCTGTTC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCGAACAGCAGAAGCCCTaGCTTATTCCAAGTTCGAAA +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCEQQKP*LIPSSK
Trigger: TTTCGAACTTGGAATAAGGCAGGGCTTCTGCTGTTC...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCTGAAGTTGCTCCATaGTGGCCACATACTCGAAAA +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPPEVAP*WPHTRK
Trigger: TTTTCGAGTATGTGGCCAGCATGGAGCAACTTCAGG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAAAGTGGGTGGGTGACTaGACTGAGATTTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPKWVGD*TEISKG
Trigger: GCCTTTTGAAATCTCAGTGCAGTCACCCACCCACTT...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAAGCTGTAACAGGACATaGCCATCAGCGGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPSCNRT*PSAGAG
Trigger: GCCCGCCCCCGCTGATGGGCATGTCCTGTTACAGCT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATACTTCCCATAGCTGCTaGAATGTCCCCTACAACCTG +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHTSHSC*NVPYNL
Trigger: CAGGTTGTAGGGGACATTGCAGCAGCTATGGGAAGT...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAATAACTTCCCATAGCTaGTGCAATGTCCCCTACAAC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAITSHS*CNVPYN
Trigger: GTTGTAGGGGACATTGCAGCAGCTATGGGAAGTTAT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACAGTGCTGCAAGCCCACTaGCTGTACATTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTVLQAH*LYIQCK
Trigger: CTTACACTGAATGTACAGGCAGTGGGCTTGCAGCAC...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTGCAGCAGAAGCCATCTaGCCGTCCACCGCCACACTC +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFAAEAI*PSTATL
Trigger: GAGTGTGGCGGTGGACGGCCAGATGGCTTCTGCTGC...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCCGTGTTCACAATAGTTaGGCAAACACCTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPRVHNS*ANTCLR
Trigger: TCTCAGACAGGTGTTTGCCCAACTATTGTGAACACG...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCACAGGGTCTGGGTGGCTaGGGTGCAGAGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPQGLGG*GAELPS
Trigger: TGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTG...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTGCTGGGCCATACAGCTaGACTCAGTCACGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIAGPYS*TQSRVL
Trigger: CAGGACACGTGACTGAGTCCAGCTGTATGGCCCAGC...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCCCCAAGCCTGTACATaGCAAGATGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCPQACT*QDGSAA
Trigger: TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAGCAAATCCAGGACCATaGCTGCTGGAGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVANPGP*LLESSE
Trigger: TTCCGAGCTCTCCAGCAGTCATGGTCCTGGATTTGC...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGATCAACCACTTCTaGTCTGTATGCACATCCGAA +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCKINHF*SVCTSE
Trigger: TTCGGATGTGCATACAGATCAGAAGTGGTTGATCTT...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAAGATCAACCACTTCTaGTCTGTATGCACATCCGAA +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPKINHF*SVCTSE
Trigger: TTCGGATGTGCATACAGATCAGAAGTGGTTGATCTT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTTTCTTAATTGCAGTGTaGTGTGATCTCCATTTGGCC +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACFLIAV*CDLHLA
Trigger: GGCCAAATGGAGATCACATCACACTGCAATTAAGAA...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCTTCTTAATTGCAGTGTaGTGTGATCTCCATTTGGCC +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCFLIAV*CDLHLA
Trigger: GGCCAAATGGAGATCACATCACACTGCAATTAAGAA...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCCAAGGGACCCCTGCTaGACTGAAATCAGATCTACC +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCPRDPC*TEIRST
Trigger: GGTAGATCTGATTTCAGTTCAGCAGGGGTCCCTTGG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACACCACATGAGTCTATCTaGAGGTCACTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTPHESI*RSLKFP
Trigger: TGGGAACTTCAGTGACCTTCAGATAGACTCATGTGG...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCAGCCGTTGTGCTGTATaGTGGTCCATGCAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVSRCAV*WSMQFR
Trigger: CCGAAACTGCATGGACCATCATACAGCACAACGGCT...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTCGGTTAATAGTGGCCTaGAGTTGCTCCATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIRLIVA*SCSMLA
Trigger: GGCCAGCATGGAGCAACTTCAGGCCACTATTAACCG...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCCTTATTGACCAGCCGTaGCTTCTTGCAGTAATAAGT +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCLIDQP*LLAVIS
Trigger: ACTTATTACTGCAAGAAGTCACGGCTGGTCAATAAG...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCTTATTGACCAGCCGTaGCTTCTTGCAGTAATAAGT +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASLIDQP*LLAVIS
Trigger: ACTTATTACTGCAAGAAGTCACGGCTGGTCAATAAG...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCCTTATTGACCAGCCGTaGCTTCTTGCAGTAATAAGT +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPLIDQP*LLAVIS
Trigger: ACTTATTACTGCAAGAAGTCACGGCTGGTCAATAAG...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTTCCATCTTGCTTATTaGCCAGCCGTGACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHFHLAY*PAVTSC
Trigger: GCAAGAAGTCACGGCTGGTCAATAAGCAAGATGGAA...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCTGGAAGGTAGGAAAATaGAGATATGAAGCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASWKVGK*RYEASV
Trigger: TACCGAGGCTTCATATCTTCATTTTCCTACCTTCCA...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCTCTATTGTTCCAGAATaGTCTGCAAACGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPSIVPE*SANECV
Trigger: GACACACTCGTTTGCAGATCATTCTGGAACAATAGA...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCACTGTCTACATTCTCTaGCCTTTTTGCCTCACTTCT +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCTVYIL*PFCLTS
Trigger: AGAAGTGAGGCAAAAAGGTCAGAGAATGTAGACAGT...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCACGGCCACACAGGATCTaGGAAGCATTTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMARPHRI*EAFPGL
Trigger: TAGACCTGGAAATGCTTCTCAGATCCTGTGTGGCCG...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCATCTTCTATTCAGCCTTaGAAATCCAGGACCATGACT +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAASSIQP*KSRTMT
Trigger: AGTCATGGTCCTGGATTTGCAAGGCTGAATAGAAGA...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCGCATTCCAATTCTaGCCTTGGGGTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTFAFQF*PWGSIP
Trigger: TGGAATGGAACCCCAAGGGCAGAATTGGAATGCGAA...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAACACCTGTCTGAGATaGCACATGAGTCTATCTGAA +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCNTCLR*HMSLSE
Trigger: TTCAGATAGACTCATGTGGCATCTCAGACAGGTGTT...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCAACACCTGTCTGAGATaGCACATGAGTCTATCTGAA +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASNTCLR*HMSLSE
Trigger: TTCAGATAGACTCATGTGGCATCTCAGACAGGTGTT...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTCTGTATGATGGTCCATaGAGTTTCGGTCATATTGCA +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACLYDGP*SFGHIA
Trigger: TGCAATATGACCGAAACTGCATGGACCATCATACAG...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCCTGTATGATGGTCCATaGAGTTTCGGTCATATTGCA +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCLYDGP*SFGHIA
Trigger: TGCAATATGACCGAAACTGCATGGACCATCATACAG...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACAAAGTCAGAGCCGTTGTaGTGTATGATGGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTKSEPL*CMMVHA
Trigger: TGCATGGACCATCATACAGCACAACGGCTCTGACTT...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAAACTCCTGTTCACAGTaGTCTGCACGGTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPNSCSQ*SARLIV
Trigger: CACTATTAACCGTGCAGAGCACTGTGAACAGGAGTT...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATAAGTGGGTGGGTGACTaGACTGAGATTTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHKWVGD*TEISKG
Trigger: GCCTTTTGAAATCTCAGTGCAGTCACCCACCCACTT...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAATAACTTCCCATAGCTaGTGCAATGTCCCCTACAAC +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPITSHS*CNVPYN
Trigger: GTTGTAGGGGACATTGCAGCAGCTATGGGAAGTTAT...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTGCATTTCCCTCCATTaGGGCATAACTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHCISLH*GITSHS
Trigger: GCTATGGGAAGTTATGCCGCAATGGAGGGAAATGCA...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATGAATGGCCCTGTGTATaGAGAGAAAGTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHEWPCV*RESAVT
Trigger: TGTGACTGCACTTTCTCTGCATACACAGGGCCATTC...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTGAAGCCCTGCGCACCTaGCAGTGCAGTATCCTGGTC +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFEALRT*QCSILV
Trigger: GACCAGGATACTGCACTGGCAGGTGCGCAGGGCTTC...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAATCTGGGTGGCTGGGGTaGAGAGCTGCCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQSGWLG*RAAFRG
Trigger: CCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGA...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGAGTCACTTTTGATTaGATTAGCAAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAARVTFD*ISKGLS
Trigger: AGAGAGCCCCTTGCTAATGCAATCAAAAGTGACTCT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCAGAGTCACTTTTGATTaGATTAGCAAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASRVTFD*ISKGLS
Trigger: AGAGAGCCCCTTGCTAATGCAATCAAAAGTGACTCT...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCCAATTCTGCCCTTaGGGTTCCATTCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTFQFCP*GSIPKG
Trigger: TCCCTTTGGAATGGAACCCCAAGGGCAGAATTGGAA...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCCATAGCAATGATCTGTaGTTTTTGCTGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPHSNDL*FLLLGQ
Trigger: TTGGCCAAGCAGCAAAAACCACAGATCATTGCTATG...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACGTGTTCACAATAGTTaGGCAAACACCTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPRVHNS*ANTCLR
Trigger: TCTCAGACAGGTGTTTGCCCAACTATTGTGAACACG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTTGGTTGTCGTTGAAGTaGGTGGGTGACTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCWLSLK*VGDCTE
Trigger: CTCAGTGCAGTCACCCACCCACTTCAACGACAACCA...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCTCACATGGTGCCACTaGTTGTCGTTGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCLTWCH*LSLKWV
Trigger: CACCCACTTCAACGACAACCAGTGGCACCATGTGAG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTATGTCCCCTACAACCTaGCTGCACTTCTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCMSPTT*LHFWSH
Trigger: GTGACTCCAGAAGTGCAGCCAGGTTGTAGGGGACAT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCACACAAAAGAACCCAATaGGTCTTTCTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAHKRTQ*VFLCIS
Trigger: GGAAATGCAGAGAAAGACCCATTGGGTTCTTTTGTG...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAAAAGCAGCAAGCTTaGTGTTCGTGTTGTTCGGAA +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCKKQQA*CSCCSE
Trigger: TTCCGAACAACACGAACACCAAGCTTGCTGCTTTTT...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAAAAAGCAGCAAGCTTaGTGTTCGTGTTGTTCGGAA +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAKKQQA*CSCCSE
Trigger: TTCCGAACAACACGAACACCAAGCTTGCTGCTTTTT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCACTGTACATGGCAAGATaGCAGTGCTGCAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMALYMAR*QCCKPT
Trigger: AGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAG...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCCCCAAGCCTGTACATaGCAAGATGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIPQACT*QDGSAA
Trigger: TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCACTGGACGAGGCTTCCTaGAGCCACCCCAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPLDEAS*SHPKPV
Trigger: TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAG...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGCTCGGAAGAACTGCTaGAGGATGCCTGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPARKNC*RMPEAR
Trigger: CCTTGCCTCAGGCATCCTTCAGCAGTTCTTCCGAGC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCGCAAATCCAGGACCATaGCTGCTGGAGAGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSANPGP*LLESSE
Trigger: TTCCGAGCTCTCCAGCAGTCATGGTCCTGGATTTGC...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTGCATTTGCATTTCCTaGAAAACCCCAGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHCICIS*KTPDAV
Trigger: GACAGCATCTGGGGTTTTTCAGGAAATGCAAATGCA...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACGAATCCCTCCAAAGCTaGTCTCATAATCAAGATTCA +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHESLQS*SHNQDS
Trigger: TGAATCTTGATTATGAGATCAGCTTTGGAGGGATTC...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCGAATCCCTCCAAAGCTaGTCTCATAATCAAGATTCA +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCESLQS*SHNQDS
Trigger: TGAATCTTGATTATGAGATCAGCTTTGGAGGGATTC...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCCCCCCTGAAATCAGCTaGAGTTCACTGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVPPEIS*SSLNSR
Trigger: TCTGCTGTTCAGTGAACTTCAGCTGATTTCAGGGGG...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTGAGGAGGATACCCCCTaGAATCAGCTGAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCEEDTP*NQLKFT
Trigger: AGTGAACTTCAGCTGATTTCAGGGGGTATCCTCCTC...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACCAAGGGACCCCTGCTaGACTGAAATCAGATCTACC +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVPRDPC*TEIRST
Trigger: GGTAGATCTGATTTCAGTTCAGCAGGGGTCCCTTGG...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTCTTATAGGCTTCACATaGCTGCTCATAGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACLIGFT*LLIDRV
Trigger: AACTCTATCTATGAGCAGTCATGTGAAGCCTATAAG...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCACTTATAGGCTTCACATaGCTGCTCATAGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAALIGFT*LLIDRV
Trigger: AACTCTATCTATGAGCAGTCATGTGAAGCCTATAAG...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTAGCCGTTGTGCTGTATaGTGGTCCATGCAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSISRCAV*WSMQFR
Trigger: CCGAAACTGCATGGACCATCATACAGCACAACGGCT...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTTATTGACCAGCCGTaGCTTCTTGCAGTAATAAGT +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPLIDQP*LLAVIS
Trigger: ACTTATTACTGCAAGAAGTCACGGCTGGTCAATAAG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAGGAAAATGAAGATATaGAGCCTCGGTATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPRKMKI*SLGIKG
Trigger: TCCTTTGATACCGAGGCTTCATATCTTCATTTTCCT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGGAAAATGAAGATATaGAGCCTCGGTATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCRKMKI*SLGIKG
Trigger: TCCTTTGATACCGAGGCTTCATATCTTCATTTTCCT...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAATTCCCCACATCAAATaGAAAAGTCACTACTGTCGG +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPIPHIK*KSHYCR
Trigger: CCGACAGTAGTGACTTTTTCATTTGATGTGGGGAAT...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATGCAGAAATCTCATTTaGGCAGAATGGCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTCRNLI*AEWPCV
Trigger: TACACAGGGCCATTCTGCTCAAATGAGATTTCTGCA...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCATTGTATATCACGGATaGGCCAGATCCAAAATATGC +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPIVYHG*ARSKIC
Trigger: GCATATTTTGGATCTGGCTCATCCGTGATATACAAT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCACATATCACCATGAAATaGAGCAGCGTGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAHITMK*SSVGAG
Trigger: TCCAGCTCCCACGCTGCTTCATTTCATGGTGATATG...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCATATCACCATGAAATaGAGCAGCGTGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCHITMK*SSVGAG
Trigger: TCCAGCTCCCACGCTGCTTCATTTCATGGTGATATG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTTAATCATTATGTGGTaGAGTTGTCCATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHLIIMW*SCPSAM
Trigger: CATGGCTGATGGACAACTTCACCACATAATGATTAA...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCCATTCGTTTTTCCATTaGGAACCCCTGGCTATTAAA +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPHSFFH*EPLAIK
Trigger: TTTAATAGCCAGGGGTTCTCAATGGAAAAACGAATG...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCTGTTCACAGTGCTCTaGACGGTTAATAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCLFTVL*TVNSGL
Trigger: CAGGCCACTATTAACCGTGCAGAGCACTGTGAACAG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCTGTATGCAGAGAAAGTaGAGTCACAAAAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASCMQRK*SHKRTQ
Trigger: TTGGGTTCTTTTGTGACTGCACTTTCTCTGCATACA...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCTGTATGCAGAGAAAGTaGAGTCACAAAAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCCMQRK*SHKRTQ
Trigger: TTGGGTTCTTTTGTGACTGCACTTTCTCTGCATACA...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAGCTGGGGTGCAGAGCTaGCTTCAGAGGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQAGVQS*LQRGHV
Trigger: CACGTGGCCCCTCTGAAGGCAGCTCTGCACCCCAGC...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCTTGATGTGGCATCAGTaGCAGGCTGGGCCATACAGC +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSLMWHQ*QAGPYS
Trigger: GCTGTATGGCCCAGCCTGGCACTGATGCCACATCAA...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAAGCGGTCCCACAAATTaGCAGCAGCATCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVSGPTN*QQHPSF
Trigger: GAAGGAAGGATGCTGCTGCCAATTTGTGGGACCGCT...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR CCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACACGTGTTCACAATAGTTaGGCAAACACCTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTRVHNS*ANTCLR
Trigger: TCTCAGACAGGTGTTTGCCCAACTATTGTGAACACG...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACACAAAAGAACCCAATaGGTCTTTCTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPHKRTQ*VFLCIS
Trigger: GGAAATGCAGAGAAAGACCCATTGGGTTCTTTTGTG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAAAAAAGCAGCAAGCTTaGTGTTCGTGTTGTTCGGAA +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPKKQQA*CSCCSE
Trigger: TTCCGAACAACACGAACACCAAGCTTGCTGCTTTTT...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGGCATCAGTGCCAGGCTaGGCCATACAGCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKASVPG*AIQLDS
Trigger: TGAGTCCAGCTGTATGGCCCAGCCTGGCACTGATGC...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CAGACCACAGAGGACTGTGAGGCTTCACCAATAAACCTCCCTAGAGTTCAGCTACCCCAAGCCTGTACATaGCAAGATGGCAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QTTEDCEASPINLPRVQLPQACT*QDGSAA
Trigger: TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG...TAGCTGAACTCTAGGGAGGTTTATTGGTGAAGCCTCACAGTCCTCTGTGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGCTTTATTATGCTTGTaGCCACTGAAGATGCAAACA +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAALLCL*PLKMQT
Trigger: TGTTTGCATCTTCAGTGGCCACAAGCATAATAAAGC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGCTTTATTATGCTTGTaGCCACTGAAGATGCAAACA +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACALLCL*PLKMQT
Trigger: TGTTTGCATCTTCAGTGGCCACAAGCATAATAAAGC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAATTGCAGTGTGATGTaGTCTCCATTTGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMANCSVM*SPFGPS
Trigger: GGAAGGGCCAAATGGAGATCACATCACACTGCAATT...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAGAGGAGGATACCCCCTaGAATCAGCTGAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVEEDTP*NQLKFT
Trigger: AGTGAACTTCAGCTGATTTCAGGGGGTATCCTCCTC...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAGCCTCATACATCCCTaGAATCCACCAAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCSLIHP*NPPSGL
Trigger: AAGTCCACTTGGTGGATTTCAGGGATGTATGAGGCT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTGGAAGGTAGGAAAATaGAGATATGAAGCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHWKVGK*RYEASV
Trigger: TACCGAGGCTTCATATCTTCATTTTCCTACCTTCCA...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATGGAAGGTAGGAAAATaGAGATATGAAGCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTWKVGK*RYEASV
Trigger: TACCGAGGCTTCATATCTTCATTTTCCTACCTTCCA...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGTGAAGTATAATCATTaGAGATCAAGGCGAAGTTTG +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAVKYNH*RSRRSL
Trigger: CAAACTTCGCCTTGATCTTCAATGATTATACTTCAC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCATTCGCATTCCAATTCTaGCCTTGGGGTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAFAFQF*PWGSIP
Trigger: TGGAATGGAACCCCAAGGGCAGAATTGGAATGCGAA...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTATCTGTGGTTTTTGCTaGTTGGCCAAATCAATGATA +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACICGFC*LAKSMI
Trigger: TATCATTGATTTGGCCAAGCAGCAAAAACCACAGAT...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATGAGACAGAATGCCACTaGCCATCATTTAATTCGACA +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHETECH*PSFNST
Trigger: TGTCGAATTAAATGATGGGCAGTGGCATTCTGTCTC...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCAAGTCAGAGCCGTTGTaGTGTATGATGGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVKSEPL*CMMVHA
Trigger: TGCATGGACCATCATACAGCACAACGGCTCTGACTT...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACTGTTCACAGTGCTCTaGACGGTTAATAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVLFTVL*TVNSGL
Trigger: CAGGCCACTATTAACCGTGCAGAGCACTGTGAACAG...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTATCAACCCTCACATGGTaGCACTGGTTGTCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVSTLTW*HWLSLK
Trigger: CTTCAACGACAACCAGTGGCACCATGTGAGGGTTGA...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTACTTCCCATAGCTGCTaGAATGTCCCCTACAACCTG +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSITSHSC*NVPYNL
Trigger: CAGGTTGTAGGGGACATTGCAGCAGCTATGGGAAGT...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCATGTATGCAGAGAAAGTaGAGTCACAAAAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: FLEPPQACTWQDGSAASPCMQRK*SHKRTQ
Trigger: TTGGGTTCTTTTGTGACTGCACTTTCTCTGCATACA...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGTGGCTGAGCTGCACTaGAGAGAGGCAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQVAELH*REAACE
Trigger: TTCACAGGCTGCCTCTCTGCAGTGCAGCTCAGCCAC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCATTGATGTGGCATCAGTaGCAGGCTGGGCCATACAGC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPLMWHQ*QAGPYS
Trigger: GCTGTATGGCCCAGCCTGGCACTGATGCCACATCAA...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACACAGACCTCCAATTACTaGAGAGTCACTTTTGATTGC +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTQTSNY*RVTFDC
Trigger: GCAATCAAAAGTGACTCTGCAGTAATTGGAGGTCTG...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTGCAAGATGGCAGTGCTaGAAGCCCACTGCCTGTACA +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFARWQC*KPTACT
Trigger: TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGC...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAATCTGCCAGCTCTGTCTaGGTCTTCAGCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQSASSV*VFSPSR
Trigger: CCTAGAGGGGCTGAAGACCCAGACAGAGCTGGCAGA...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCACAGGACCATGACTGCTaGAGAGCTCGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPQDHDC*RARKNC
Trigger: GCAGTTCTTCCGAGCTCTCCAGCAGTCATGGTCCTG...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCTCAATCTGCAACCACTaGTATTTGTTAGACACAAGT +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCSICNH*YLLDTS
Trigger: ACTTGTGTCTAACAAATACCAGTGGTTGCAGATTGA...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCATCAATCTGCAACCACTaGTATTTGTTAGACACAAGT +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAASICNH*YLLDTS
Trigger: ACTTGTGTCTAACAAATACCAGTGGTTGCAGATTGA...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTTTTGGCCCTTCCCTGTaGAGTAGAATCCCATCACTC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIFGPSL*SRIPSL
Trigger: GAGTGATGGGATTCTACTCCACAGGGAAGGGCCAAA...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCTGTTTGCCCAAACGCTaGATGAGCACTGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVCLPKR*MSTECQ
Trigger: TTGGCATTCAGTGCTCATCCAGCGTTTGGGCAAACA...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCATGTTTGCCCAAACGCTaGATGAGCACTGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMACLPKR*MSTECQ
Trigger: TTGGCATTCAGTGCTCATCCAGCGTTTGGGCAAACA...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGTGGACTTTTACATTTaGATCCAAAGCTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAVDFYI*IQSFCQ
Trigger: CTGACAAAAGCTTTGGATCCAAATGTAAAAGTCCAC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAGAAGTTGCTCCATGCTaGCCACATACTCGAAAAACC +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAEVAPC*PHTRKT
Trigger: GGTTTTTCGAGTATGTGGCCAGCATGGAGCAACTTC...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAGCCAGTGCAGTATCCTaGTCCACATCACTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVASAVS*STSLCS
Trigger: AGAACACAGTGATGTGGACCAGGATACTGCACTGGC...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTGCCAGTGCAGTATCCTaGTCCACATCACTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIASAVS*STSLCS
Trigger: AGAACACAGTGATGTGGACCAGGATACTGCACTGGC...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGTCCTTTCCCTTGATGTaGCATCAGTGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKSFPLM*HQCQAG
Trigger: CCCAGCCTGGCACTGATGCCACATCAAGGGAAAGGA...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTTCCTTTCCCTTGATGTaGCATCAGTGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFSFPLM*HQCQAG
Trigger: CCCAGCCTGGCACTGATGCCACATCAAGGGAAAGGA...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGTATATGTTTCAGAATaGGAAATGGGGCTCTATACT +
Preference number: 4 (lower is better)
Translates to: ATPSLYMARWQCCKPTACVYVSE*EMGLYT
Trigger: AGTATAGAGCCCCATTTCCCATTCTGAAACATATAC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCCTGACTCCTCACTaGAAAGCACTCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSISLTPH*KALSIF
Trigger: AAAGATGCTGAGTGCTTTTCAGTGAGGAGTCAGGGA...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR TCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTTCCATTCCAAAGGGATaGAGCGCAGAAATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSISIPKG*SAEIWL
Trigger: AAGCCAGATTTCTGCGCTTCATCCCTTTGGAATGGA...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTATTCGACACCTGCTGTaGTGTCACTGGGTAATTTTC +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCIRHLL*CHWVIF
Trigger: GAAAATTACCCAGTGACATCACAGCAGGTGTCGAAT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTGGACCCCTGCTGAACTaGAATCAGATCTACCACTTT +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIGPLLN*NQIYHF
Trigger: AAAGTGGTAGATCTGATTTCAGTTCAGCAGGGGTCC...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAAGGGACCCCTGCTaGACTGAAATCAGATCTACC +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFPRDPC*TEIRST
Trigger: GGTAGATCTGATTTCAGTTCAGCAGGGGTCCCTTGG...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTTTCCATCTTGCTTATTaGCCAGCCGTGACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIFHLAY*PAVTSC
Trigger: GCAAGAAGTCACGGCTGGTCAATAAGCAAGATGGAA...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTTCCATCTTGCTTATTaGCCAGCCGTGACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIFHLAY*PAVTSC
Trigger: GCAAGAAGTCACGGCTGGTCAATAAGCAAGATGGAA...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCTGCAGAAATCTCATTTaGGCAGAATGGCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVCRNLI*AEWPCV
Trigger: TACACAGGGCCATTCTGCTCAAATGAGATTTCTGCA...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTTGCAGAAATCTCATTTaGGCAGAATGGCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCCRNLI*AEWPCV
Trigger: TACACAGGGCCATTCTGCTCAAATGAGATTTCTGCA...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAGCATTTCCAGGTCTATaGATAACACCACGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVAFPGL*ITPRGD
Trigger: GTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGC...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCAGAATCCCATCACTCTaGATGGTTTTGAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: GFLEPPQACTWQDGSAASRIPSL*MVLNFK
Trigger: TTTGAAATTCAAAACCATGCAGAGTGATGGGATTCT...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACCTGAAGTTGCTCCATaGTGGCCACATACTCGAAAA +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVPEVAP*WPHTRK
Trigger: TTTTCGAGTATGTGGCCAGCATGGAGCAACTTCAGG...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCAACTCCTGTTCACAGTaGTCTGCACGGTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVNSCSQ*SARLIV
Trigger: CACTATTAACCGTGCAGAGCACTGTGAACAGGAGTT...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAATAACTTCCCATAGCTaGTGCAATGTCCCCTACAAC +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAITSHS*CNVPYN
Trigger: GTTGTAGGGGACATTGCAGCAGCTATGGGAAGTTAT...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTGAATGGCCCTGTGTATaGAGAGAAAGTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIEWPCV*RESAVT
Trigger: TGTGACTGCACTTTCTCTGCATACACAGGGCCATTC...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAATGTTAAATCATAGCTaGCAATCAGAAGAAGTACTC +
Preference number: 4 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAMLNHS*QSEEVL
Trigger: GAGTACTTCTTCTGATTGGCAGCTATGATTTAACAT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCATGTTAAATCATAGCTaGCAATCAGAAGAAGTACTC +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCMLNHS*QSEEVL
Trigger: GAGTACTTCTTCTGATTGGCAGCTATGATTTAACAT...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATCATGTTCACATTTATTaGGCTCCCCCAAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHHVHIY*APPKDL
Trigger: AAGATCTTTTGGGGGAGCCCAATAAATGTGAACATG...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTTCCAATTCTGCCCTTaGGGTTCCATTCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIFQFCP*GSIPKG
Trigger: TCCCTTTGGAATGGAACCCCAAGGGCAGAATTGGAA...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCTTTGGCCCTTCCCTGTaGAGTAGAATCCCATCACTC +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSFGPSL*SRIPSL
Trigger: GAGTGATGGGATTCTACTCCACAGGGAAGGGCCAAA...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTGAAGTTGCTCCATGCTaGCCACATACTCGAAAAACC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIEVAPC*PHTRKT
Trigger: GGTTTTTCGAGTATGTGGCCAGCATGGAGCAACTTC...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCACTCACATGGTGCCACTaGTTGTCGTTGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPLTWCH*LSLKWV
Trigger: CACCCACTTCAACGACAACCAGTGGCACCATGTGAG...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGGCGGGCTGTGTCTTTaGTGTCAGCTGATCCACTTG +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQGGLCL*CQLIHL
Trigger: CAAGTGGATCAGCTGACACCAAAGACACAGCCCGCC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCACTGTACATGGCAAGATaGCAGTGCTGCAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPLYMAR*QCCKPT
Trigger: AGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAG...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAACTTATGTATTACATaGTTAAGAGACCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: TRLPGATPSLYMARWQCCNLCIT*LRDQGY
Trigger: GTAGCCTTGGTCTCTTAACCATGTAATACATAAGTT...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACATTTTACATTCTTTaGGAAACTGGCATTACTCAG +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPTFYIL*ETGITQ
Trigger: CTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGT...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCTTTCAGAATGGGAAATaGGGCTCTATACTTCAATTT +
Preference number: 4 (lower is better)
Translates to: LPGATPSLYMARWQCCKPFQNGK*GSILQF
Trigger: AAATTGAAGTATAGAGCCCCATTTCCCATTCTGAAA...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGACGCTGGATGAGCACTaGATGCCAATGCTGATCATC +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKTLDEH*MPMLII
Trigger: GATGATCAGCATTGGCATTCAGTGCTCATCCAGCGT...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAATGCCCAAACGCTGGATaGGCACTGAATGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQCPNAG*ALNANA
Trigger: AGCATTGGCATTCAGTGCTCATCCAGCGTTTGGGCA...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTTTCCAAGTTCGAAATTaGAAAGTGGCAGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCFQVRN*KVAETS
Trigger: GGAGGTTTCTGCCACTTTTCAATTTCGAACTTGGAA...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTATTCGACACCTGCTGTaGTGTCACTGGGTAATTTTC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIIRHLL*CHWVIF
Trigger: GAAAATTACCCAGTGACATCACAGCAGGTGTCGAAT...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAACTATCTGAAGGTCACTaGAGTTCCCAAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQLSEGH*SSQGTP
Trigger: AGGGGTCCCTTGGGAACTTCAGTGACCTTCAGATAG...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAAGCCGTTGTGCTGTATaGTGGTCCATGCAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQSRCAV*WSMQFR
Trigger: CCGAAACTGCATGGACCATCATACAGCACAACGGCT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCTGGAAGGTAGGAAAATaGAGATATGAAGCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVWKVGK*RYEASV
Trigger: TACCGAGGCTTCATATCTTCATTTTCCTACCTTCCA...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTTCTATTGTTCCAGAATaGTCTGCAAACGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCSIVPE*SANECV
Trigger: GACACACTCGTTTGCAGATCATTCTGGAACAATAGA...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTACTGTCTACATTCTCTaGCCTTTTTGCCTCACTTCT +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCTVYIL*PFCLTS
Trigger: AGAAGTGAGGCAAAAAGGTCAGAGAATGTAGACAGT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCACTGTCTACATTCTCTaGCCTTTTTGCCTCACTTCT +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVTVYIL*PFCLTS
Trigger: AGAAGTGAGGCAAAAAGGTCAGAGAATGTAGACAGT...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACAAGTGCCTTTATTGTATaGTTGGCTTGCAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: TPSLYMARWQCCKPTACTSAFIV*LACRIQ
Trigger: TTGAATTCTGCAAGCCAATCATACAATAAAGGCACT...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTCTGAAAAACCCCAGATaGTGTCCTCTTGGCGATATT +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSILKNPR*CPLGDI
Trigger: AATATCGCCAAGAGGACAGCATCTGGGGTTTTTCAG...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTGAGACAGAATGCCACTaGCCATCATTTAATTCGACA +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCETECH*PSFNST
Trigger: TGTCGAATTAAATGATGGGCAGTGGCATTCTGTCTC...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCGAGACAGAATGCCACTaGCCATCATTTAATTCGACA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVETECH*PSFNST
Trigger: TGTCGAATTAAATGATGGGCAGTGGCATTCTGTCTC...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAACACCTGTCTGAGATaGCACATGAGTCTATCTGAA +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCNTCLR*HMSLSE
Trigger: TTCAGATAGACTCATGTGGCATCTCAGACAGGTGTT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCCTGTATGATGGTCCATaGAGTTTCGGTCATATTGCA +
Preference number: 4 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVLYDGP*SFGHIA
Trigger: TGCAATATGACCGAAACTGCATGGACCATCATACAG...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCTGTTCACAGTGCTCTaGACGGTTAATAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFLFTVL*TVNSGL
Trigger: CAGGCCACTATTAACCGTGCAGAGCACTGTGAACAG...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCAGCTGTAACAGGACATaGCCATCAGCGGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASSCNRT*PSAGAG
Trigger: GCCCGCCCCCGCTGATGGGCATGTCCTGTTACAGCT...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAATAACTTCCCATAGCTaGTGCAATGTCCCCTACAAC +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVITSHS*CNVPYN
Trigger: GTTGTAGGGGACATTGCAGCAGCTATGGGAAGTTAT...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGAAGCCCTGCGCACCTaGCAGTGCAGTATCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGVDKLRNPIVTWEALEGEALRT*QCSILV
Trigger: GACCAGGATACTGCACTGGCAGGTGCGCAGGGCTTC...ACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATAACTTGTACCTGATCTaGAAACTTCCATTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHNLYLI*KLPFLA
Trigger: TGCCAAAAATGGAAGTTTGCAGATCAGGTACAAGTT...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAATCTGCAACCACTaGTATTTGTTAGACACAAGT +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHSICNH*YLLDTS
Trigger: ACTTGTGTCTAACAAATACCAGTGGTTGCAGATTGA...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACAGATGCTGTCCTCTTaGCGATATTGTTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVQMLSS*RYCFQF
Trigger: GAACTGGAAACAATATCGCCAAGAGGACAGCATCTG...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTCAGATGCTGTCCTCTTaGCGATATTGTTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIQMLSS*RYCFQF
Trigger: GAACTGGAAACAATATCGCCAAGAGGACAGCATCTG...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCAGATGCTGTCCTCTTaGCGATATTGTTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIQMLSS*RYCFQF
Trigger: GAACTGGAAACAATATCGCCAAGAGGACAGCATCTG...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCTGTTTGCCCAAACGCTaGATGAGCACTGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSCLPKR*MSTECQ
Trigger: TTGGCATTCAGTGCTCATCCAGCGTTTGGGCAAACA...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGAAGGTGCTCCAGGACTaGGAACACTCCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVKVLQD*EHSPPC
Trigger: ACACGGTGGGGAGTGTTCCCAGTCCTGGAGCACCTT...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGGCCAGTGCAGTATCCTaGTCCACATCACTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKASAVS*STSLCS
Trigger: AGAACACAGTGATGTGGACCAGGATACTGCACTGGC...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAACGCTGGATGAGCACTaGATGCCAATGCTGATCATC +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQTLDEH*MPMLII
Trigger: GATGATCAGCATTGGCATTCAGTGCTCATCCAGCGT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTTTCCAAGTTCGAAATTaGAAAGTGGCAGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIFQVRN*KVAETS
Trigger: GGAGGTTTCTGCCACTTTTCAATTTCGAACTTGGAA...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAACCCCCTGAAATCAGCTaGAGTTCACTGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQPPEIS*SSLNSR
Trigger: TCTGCTGTTCAGTGAACTTCAGCTGATTTCAGGGGG...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGGGACCCCTGCTGAACTaGAATCAGATCTACCACTTT +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKGPLLN*NQIYHF
Trigger: AAAGTGGTAGATCTGATTTCAGTTCAGCAGGGGTCC...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAATTCCCCACATCAAATaGAAAAGTCACTACTGTCGG +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVIPHIK*KSHYCR
Trigger: CCGACAGTAGTGACTTTTTCATTTGATGTGGGGAAT...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAATTGTATATCACGGATaGGCCAGATCCAAAATATGC +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAIVYHG*ARSKIC
Trigger: GCATATTTTGGATCTGGCTCATCCGTGATATACAAT...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAAGCTTCATATCACCATaGAATGAAGCAGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPSFISP*NEAAWE
Trigger: CTCCCACGCTGCTTCATTTCATGGTGATATGAAGCT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGAGCTTCATATCACCATaGAATGAAGCAGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKSFISP*NEAAWE
Trigger: CTCCCACGCTGCTTCATTTCATGGTGATATGAAGCT...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCATTAATCATTATGTGGTaGAGTTGTCCATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMALIIMW*SCPSAM
Trigger: CATGGCTGATGGACAACTTCACCACATAATGATTAA...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGCATTTCCAGGTCTATaGATAACACCACGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPAFPGL*ITPRGD
Trigger: GTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAGATTGTGTAGATCACTaGTGGTTGCAGCTCATATTT +
Preference number: 4 (lower is better)
Translates to: EIYHWTRLPGATPSLYMADCVDH*WLQLIF
Trigger: AAATATGAGCTGCAACCATCAGTGATCTACACAATC...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCTTCTATTCAGCCTTaGAAATCCAGGACCATGACT +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSISSIQP*KSRTMT
Trigger: AGTCATGGTCCTGGATTTGCAAGGCTGAATAGAAGA...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATAGAATCCCATCACTCTaGATGGTTTTGAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: PQACTWQDGSAASPLPVHRIPSL*MVLNFK
Trigger: TTTGAAATTCAAAACCATGCAGAGTGATGGGATTCT...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCATTGAATTCTCCCCGTaGATGGAAATGATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSIEFSP*MEMMPV
Trigger: CACAGGCATCATTTCCATGCACGGGGAGAATTCAAT...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTAAGTCAGAGCCGTTGTaGTGTATGATGGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFKSEPL*CMMVHA
Trigger: TGCATGGACCATCATACAGCACAACGGCTCTGACTT...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCATGCATTTCCCTCCATTaGGGCATAACTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPCISLH*GITSHS
Trigger: GCTATGGGAAGTTATGCCGCAATGGAGGGAAATGCA...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTTGCATTTCCCTCCATTaGGGCATAACTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFCISLH*GITSHS
Trigger: GCTATGGGAAGTTATGCCGCAATGGAGGGAAATGCA...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CTCCCTAGAGTTCAGCTACCAATGAGGTTAATACCGCTACTAAATAACATGAACCTGCGCACCTGCCAGTaGAGTATCCTGGTCCACATC +
Preference number: 4 (lower is better)
Translates to: LPRVQLPMRLIPLLNNMNLRTCQ*SILVHI
Trigger: GATGTGGACCAGGATACTGCACTGGCAGGTGCGCAG...GTTCATGTTATTTAGTAGCGGTATTAACCTCATTGGTAGCTGAACTCTAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAAGAGTCACTTTTGATTaGATTAGCAAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVRVTFD*ISKGLS
Trigger: AGAGAGCCCCTTGCTAATGCAATCAAAAGTGACTCT...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCAGACCTCCAATTACTaGAGAGTCACTTTTGATTGC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIQTSNY*RVTFDC
Trigger: GCAATCAAAAGTGACTCTGCAGTAATTGGAGGTCTG...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTTGTTTGCCCAAACGCTaGATGAGCACTGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFCLPKR*MSTECQ
Trigger: TTGGCATTCAGTGCTCATCCAGCGTTTGGGCAAACA...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGCAATCCAGTGTCATTaGTCCATTCATTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPAIQCH*SIHSGQ
Trigger: CTGACCGGAATGAATGGACCAATGACACTGGATTGC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCGCTCGGAAGAACTGCTaGAGGATGCCTGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASARKNC*RMPEAR
Trigger: CCTTGCCTCAGGCATCCTTCAGCAGTTCTTCCGAGC...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAATCCATTCCAAAGGGATaGAGCGCAGAAATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQSIPKG*SAEIWL
Trigger: AAGCCAGATTTCTGCGCTTCATCCCTTTGGAATGGA...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GAGGCTTCACCAATAAACCTCCCTAGAGTTCAGCTACCAATGAGGTTAATACCGTCCATTCCAAAGGGATaGAGCGCAGAAATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EASPINLPRVQLPMRLIPSIPKG*SAEIWL
Trigger: AAGCCAGATTTCTGCGCTTCATCCCTTTGGAATGGA...CGGTATTAACCTCATTGGTAGCTGAACTCTAGGGAGGTTTATTGGTGAAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGCCAAGGGACCCCTGCTaGACTGAAATCAGATCTACC +
Preference number: 4 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVPRDPC*TEIRST
Trigger: GGTAGATCTGATTTCAGTTCAGCAGGGGTCCCTTGG...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGTGCCTGATGACAGGTaGACTTGTCTCCTTCTATTA +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPVPDDR*TCLLLL
Trigger: TAATAGAAGGAGACAAGTTCACCTGTCATCAGGCAC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTGTGCCTGATGACAGGTaGACTTGTCTCCTTCTATTA +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFVPDDR*TCLLLL
Trigger: TAATAGAAGGAGACAAGTTCACCTGTCATCAGGCAC...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATTCGTTTTTCCATTaGGAACCCCTGGCTATTAAA +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVHSFFH*EPLAIK
Trigger: TTTAATAGCCAGGGGTTCTCAATGGAAAAACGAATG...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCATTCGTTTTTCCATTaGGAACCCCTGGCTATTAAA +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIHSFFH*EPLAIK
Trigger: TTTAATAGCCAGGGGTTCTCAATGGAAAAACGAATG...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAATTGAATTCTCCCCGTaGATGGAAATGATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPIEFSP*MEMMPV
Trigger: CACAGGCATCATTTCCATGCACGGGGAGAATTCAAT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTATCTGTGGTTTTTGCTaGTTGGCCAAATCAATGATA +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCICGFC*LAKSMI
Trigger: TATCATTGATTTGGCCAAGCAGCAAAAACCACAGAT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAAAGTCAGAGCCGTTGTaGTGTATGATGGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQKSEPL*CMMVHA
Trigger: TGCATGGACCATCATACAGCACAACGGCTCTGACTT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTAACTCCTGTTCACAGTaGTCTGCACGGTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFNSCSQ*SARLIV
Trigger: CACTATTAACCGTGCAGAGCACTGTGAACAGGAGTT...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGAATGGCCCTGTGTATaGAGAGAAAGTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQEWPCV*RESAVT
Trigger: TGTGACTGCACTTTCTCTGCATACACAGGGCCATTC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AACAGTTTAGTTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTGGGTGGCTGGGGTaGAGAGCTGCCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: NSLVENILHSLGNWHYSGSGWLG*RAAFRG
Trigger: CCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGA...CCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAACTAAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCCAGACCTCCAATTACTaGAGAGTCACTTTTGATTGC +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSQTSNY*RVTFDC
Trigger: GCAATCAAAAGTGACTCTGCAGTAATTGGAGGTCTG...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp CTCCCTAGAGTTCAGCTACCAATGAGGTTAATACCGCTACTAAATAACATGAACGCAAGATGGCAGTGCTaGAAGCCCACTGCCTGTACA +
Preference number: 4 (lower is better)
Translates to: LPRVQLPMRLIPLLNNMNARWQC*KPTACT
Trigger: TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGC...GTTCATGTTATTTAGTAGCGGTATTAACCTCATTGGTAGCTGAACTCTAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTCTGCCAGCTCTGTCTaGGTCTTCAGCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASSASSV*VFSPSR
Trigger: CCTAGAGGGGCTGAAGACCCAGACAGAGCTGGCAGA...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGTTCACATTTATTaGGCTCCCCCAAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVHVHIY*APPKDL
Trigger: AAGATCTTTTGGGGGAGCCCAATAAATGTGAACATG...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp TCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTCAGGACCATGACTGCTaGAGAGCTCGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: SGVDKLRNPIVTWEALEGQDHDC*RARKNC
Trigger: GCAGTTCTTCCGAGCTCTCCAGCAGTCATGGTCCTG...ACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCCATAGCAATGATCTGTaGTTTTTGCTGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSHSNDL*FLLLGQ
Trigger: TTGGCCAAGCAGCAAAAACCACAGATCATTGCTATG...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGAAGTTGCTCCATGCTaGCCACATACTCGAAAAACC +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQEVAPC*PHTRKT
Trigger: GGTTTTTCGAGTATGTGGCCAGCATGGAGCAACTTC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCAATCCAGTGTCATTaGTCCATTCATTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQAIQCH*SIHSGQ
Trigger: CTGACCGGAATGAATGGACCAATGACACTGGATTGC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGCTCACATGGTGCCACTaGTTGTCGTTGAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVLTWCH*LSLKWV
Trigger: CACCCACTTCAACGACAACCAGTGGCACCATGTGAG...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp AACAGTTTAGTTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGCAGGGTCTGGGTGGCTaGGGTGCAGAGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: NSLVENILHSLGNWHYSGQGLGG*GAELPS
Trigger: TGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTG...CCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAACTAAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCGCATCAGTGCCAGGCTaGGCCATACAGCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASASVPG*AIQLDS
Trigger: TGAGTCCAGCTGTATGGCCCAGCCTGGCACTGATGC...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACCTACCATATCCCCCTTaGGTGGCCACAGCGGTGACC +
Preference number: 4 (lower is better)
Translates to: LKTFYILWETGITQGLKYLPYPP*VATAVT
Trigger: GGTCACCGCTGTGGCCACTCAAGGGGGATATGGTAG...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCATTCTTAATTGCAGTGTaGTGTGATCTCCATTTGGCC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPFLIAV*CDLHLA
Trigger: GGCCAAATGGAGATCACATCACACTGCAATTAAGAA...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTTGCCCAAACGCTGGATaGGCACTGAATGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: SGVDKLRNPIVTWEALEGCPNAG*ALNANA
Trigger: AGCATTGGCATTCAGTGCTCATCCAGCGTTTGGGCA...ACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCCTTATAGGCTTCACATaGCTGCTCATAGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSLIGFT*LLIDRV
Trigger: AACTCTATCTATGAGCAGTCATGTGAAGCCTATAAG...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGGAAAATGAAGATATaGAGCCTCGGTATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSRKMKI*SLGIKG
Trigger: TCCTTTGATACCGAGGCTTCATATCTTCATTTTCCT...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAACTGTCTACATTCTCTaGCCTTTTTGCCTCACTTCT +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPTVYIL*PFCLTS
Trigger: AGAAGTGAGGCAAAAAGGTCAGAGAATGTAGACAGT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAAGGCACTTGAAGGTGTaGGTATGTATAATAGAGTGC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPRHLKV*VCIIEC
Trigger: GCACTCTATTATACATACTCACACCTTCAAGTGCCT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGACCACAGAGGACTGTGAGGCTTCACCAATAAACCTCCCTAGAGTTCAGCTAATGGATATAGTGCTATaGGAAAAGAGAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QTTEDCEASPINLPRVQLMDIVL*EKRGRF
Trigger: AAACCTGCCTCTCTTTTCTCATAGCACTATATCCAT...TAGCTGAACTCTAGGGAGGTTTATTGGTGAAGCCTCACAGTCCTCTGTGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAGACCACAGAGGACTGTaGGGCTTCACCAATAAACCT +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQDHRGL*GFTNKP
Trigger: AGGTTTATTGGTGAAGCCTCACAGTCCTCTGTGGTC...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGAGACAGAATGCCACTaGCCATCATTTAATTCGACA +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPETECH*PSFNST
Trigger: TGTCGAATTAAATGATGGGCAGTGGCATTCTGTCTC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCTGTATGATGGTCCATaGAGTTTCGGTCATATTGCA +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKLYDGP*SFGHIA
Trigger: TGCAATATGACCGAAACTGCATGGACCATCATACAG...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAACTTCCCATAGCTGCTaGAATGTCCCCTACAACCTG +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQTSHSC*NVPYNL
Trigger: CAGGTTGTAGGGGACATTGCAGCAGCTATGGGAAGT...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCTGTATGCAGAGAAAGTaGAGTCACAAAAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSCMQRK*SHKRTQ
Trigger: TTGGGTTCTTTTGTGACTGCACTTTCTCTGCATACA...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACTGTCACTTGATGTGGCATCAGTaGCAGGCTGGGCCATACAGC +
Preference number: 4 (lower is better)
Translates to: TFYILWETGITQGLKYCHLMWHQ*QAGPYS
Trigger: GCTGTATGGCCCAGCCTGGCACTGATGCCACATCAA...GTGACAGTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCACAGACCTCCAATTACTaGAGAGTCACTTTTGATTGC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPQTSNY*RVTFDC
Trigger: GCAATCAAAAGTGACTCTGCAGTAATTGGAGGTCTG...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTTTTGAGAAATTCACCCCATCGTTTCAGACGAGAAGTGTCTGGAATGACAAATATGGCAAGATGGCAGTaGTGCAAGCCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: FLRNSPHRFRREVSGMTNMARWQ*CKPTAC
Trigger: ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCAT...ATTTGTCATTCCAGACACTTCTCGTCTGAAACGATGGGGTGAATTTCTCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTTCAATCTGCAACCACTaGTATTTGTTAGACACAAGT +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSISICNH*YLLDTS
Trigger: ACTTGTGTCTAACAAATACCAGTGGTTGCAGATTGA...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAACAGATGCTGTCCTCTTaGCGATATTGTTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQQMLSS*RYCFQF
Trigger: GAACTGGAAACAATATCGCCAAGAGGACAGCATCTG...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTAGAAAAACCCAGCATATaGGTTCTCTGGATTAGTATT +
Preference number: 4 (lower is better)
Translates to: AMRNISLDEASWSHPKPVEKPSI*VLWISI
Trigger: AATACTAATCCAGAGAACCCATATGCTGGGTTTTTC...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTGAAAAACCCAGCATATaGGTTCTCTGGATTAGTATT +
Preference number: 4 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIEKPSI*VLWISI
Trigger: AATACTAATCCAGAGAACCCATATGCTGGGTTTTTC...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAACTTATGTATTACATaGTTAAGAGACCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCNLCIT*LRDQGY
Trigger: GTAGCCTTGGTCTCTTAACCATGTAATACATAAGTT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
3UTR CAA 72 bp TATAATACAGAGAAAGGCAAAGGGGCTTTATTATGCTaGTGGCCACTGAAGATGCAAACACCGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: YNTEKGKGALLC*WPLKMQTPATQ
Trigger: CTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCATAATAAAGCCCCTTTGCCTTTCTCTGTATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAAAGATCAACCACTTCTaGTCTGTATGCACATCCGAA +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQKINHF*SVCTSE
Trigger: TTCGGATGTGCATACAGATCAGAAGTGGTTGATCTT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAAATTGCAGTGTGATGTaGTCTCCATTTGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQNCSVM*SPFGPS
Trigger: GGAAGGGCCAAATGGAGATCACATCACACTGCAATT...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGAATCCCTCCAAAGCTaGTCTCATAATCAAGATTCA +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPESLQS*SHNQDS
Trigger: TGAATCTTGATTATGAGATCAGCTTTGGAGGGATTC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAACCACATGAGTCTATCTaGAGGTCACTGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQPHESI*RSLKFP
Trigger: TGGGAACTTCAGTGACCTTCAGATAGACTCATGTGG...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp GAGGCTTCACCAATAAACCTCCCTAGAGTTCAGCTACCAATGAGGTTAATACCGATTCCCCACATCAAATaGAAAAGTCACTACTGTCGG +
Preference number: 4 (lower is better)
Translates to: EASPINLPRVQLPMRLIPIPHIK*KSHYCR
Trigger: CCGACAGTAGTGACTTTTTCATTTGATGTGGGGAAT...CGGTATTAACCTCATTGGTAGCTGAACTCTAGGGAGGTTTATTGGTGAAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCCGAAGAGCTGACTGTTaGGCTGTAACAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASRRADC*AVTGHA
Trigger: GGCATGTCCTGTTACAGCTCAACAGTCAGCTCTTCG...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAATTGTATATCACGGATaGGCCAGATCCAAAATATGC +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPIVYHG*ARSKIC
Trigger: GCATATTTTGGATCTGGCTCATCCGTGATATACAAT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAATCTTCTATTCAGCCTTaGAAATCCAGGACCATGACT +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQSSIQP*KSRTMT
Trigger: AGTCATGGTCCTGGATTTGCAAGGCTGAATAGAAGA...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCATCTGTGGTTTTTGCTaGTTGGCCAAATCAATGATA +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSICGFC*LAKSMI
Trigger: TATCATTGATTTGGCCAAGCAGCAAAAACCACAGAT...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAACTTGTACCTGATCTaGAAATCACCATTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSNLYLI*KSPFLA
Trigger: TGCCAAAAATGGTGATTTGCAGATCAGGTACAAGTT...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR GCA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACGTGGCTGAGCTGCACTaGAGAGAGGCAGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LKTFYILWETGITQGLKYVAELH*REAACE
Trigger: TTCACAGGCTGCCTCTCTGCAGTGCAGCTCAGCCAC...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAAGAGTCACTTTTGATTaGATTAGCAAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQRVTFD*ISKGLS
Trigger: AGAGAGCCCCTTGCTAATGCAATCAAAAGTGACTCT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTATGTTAAATCATAGCTaGCAATCAGAAGAAGTACTC +
Preference number: 4 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIMLNHS*QSEEVL
Trigger: GAGTACTTCTTCTGATTGGCAGCTATGATTTAACAT...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TCCCGATTCTTCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCGAAGTTGCTCCATGCTaGCCACATACTCGAAAAACC +
Preference number: 4 (lower is better)
Translates to: SRFFWCRQTKKSNSYLGGEVAPC*PHTRKT
Trigger: GGTTTTTCGAGTATGTGGCCAGCATGGAGCAACTTC...GCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGAAGAATCGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAACACAAAAGAACCCAATaGGTCTTTCTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQHKRTQ*VFLCIS
Trigger: GGAAATGCAGAGAAAGACCCATTGGGTTCTTTTGTG...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAAAAAAGCAGCAAGCTTaGTGTTCGTGTTGTTCGGAA +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQKKQQA*CSCCSE
Trigger: TTCCGAACAACACGAACACCAAGCTTGCTGCTTTTT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAATTAATCATTATGTGGTaGAGTTGTCCATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQLIIMW*SCPSAM
Trigger: CATGGCTGATGGACAACTTCACCACATAATGATTAA...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGATTGAATTCTCCCCGTaGATGGAAATGATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVIEFSP*MEMMPV
Trigger: CACAGGCATCATTTCCATGCACGGGGAGAATTCAAT...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGGAACAGCAGAAGCCCTaGCTTATTCCAAGTTCGAAA +
Preference number: 4 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVEQQKP*LIPSSK
Trigger: TTTCGAACTTGGAATAAGGCAGGGCTTCTGCTGTTC...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTCAACCCTCACATGGTaGCACTGGTTGTCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASSTLTW*HWLSLK
Trigger: CTTCAACGACAACCAGTGGCACCATGTGAGGGTTGA...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGAACTTGTACCTGATCTaGAAACTTCCATTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKNLYLI*KLPFLA
Trigger: TGCCAAAAATGGAAGTTTGCAGATCAGGTACAAGTT...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTGTGGACTTTTACATTTaGATCCAAAGCTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFVDFYI*IQSFCQ
Trigger: CTGACAAAAGCTTTGGATCCAAATGTAAAAGTCCAC...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAACGTGTTCACAATAGTTaGGCAAACACCTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQRVHNS*ANTCLR
Trigger: TCTCAGACAGGTGTTTGCCCAACTATTGTGAACACG...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp TGTACTGGAAGTCTATGCACAGCAAAATGTACACCTAAAGGGGTATATGTTTCAGCCAGTGCAGTATCCTaGTCCACATCACTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: CTGSLCTAKCTPKGVYVSASAVS*STSLCS
Trigger: AGAACACAGTGATGTGGACCAGGATACTGCACTGGC...TGAAACATATACCCCTTTAGGTGTACATTTTGCTGTGCATAGACTTCCAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAACACCATTTTTGGCAATaGTCACAGAAAGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQHHFWQ*SQKGIL
Trigger: AAGAATACCTTTCTGTGATCATTGCCAAAAATGGTG...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR TCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAATCTATTGTTCCAGAATaGTCTGCAAACGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQSIVPE*SANECV
Trigger: GACACACTCGTTTGCAGATCATTCTGGAACAATAGA...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCGCATTTCCAGGTCTATaGATAACACCACGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASAFPGL*ITPRGD
Trigger: GTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGC...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAAGAATCCCATCACTCTaGATGGTTTTGAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPRIPSL*MVLNFK
Trigger: TTTGAAATTCAAAACCATGCAGAGTGATGGGATTCT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCCCTGAAGTTGCTCCATaGTGGCCACATACTCGAAAA +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASPEVAP*WPHTRK
Trigger: TTTTCGAGTATGTGGCCAGCATGGAGCAACTTCAGG...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGCATTTCCCTCCATTaGGGCATAACTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASCISLH*GITSHS
Trigger: GCTATGGGAAGTTATGCCGCAATGGAGGGAAATGCA...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAAACTTGTACCTGATCTaGAAATCACCATTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQNLYLI*KSPFLA
Trigger: TGCCAAAAATGGTGATTTGCAGATCAGGTACAAGTT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAAGATCTCTAAAAATATaGCTACTACTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQRSLKI*LLLPGL
Trigger: AAGCCCTGGAAGTAGTAGGCATATTTTTAGAGATCT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476707.1
CDS-3UTR CCA 90 bp AACAGTTTAGTTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTGGTTGTCGTTGAAGTaGGTGGGTGACTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: NSLVENILHSLGNWHYSGWLSLK*VGDCTE
Trigger: CTCAGTGCAGTCACCCACCCACTTCAACGACAACCA...CCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAACTAAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp AACAGTTTAGTTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGATGTCCCCTACAACCTaGCTGCACTTCTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: NSLVENILHSLGNWHYSGMSPTT*LHFWSH
Trigger: GTGACTCCAGAAGTGCAGCCAGGTTGTAGGGGACAT...CCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAACTAAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGCACAAAAGAACCCAATaGGTCTTTCTCTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVHKRTQ*VFLCIS
Trigger: GGAAATGCAGAGAAAGACCCATTGGGTTCTTTTGTG...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGAACTTATGTATTACATaGTTAAGAGACCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: MNAMRNISLDEASWSHPKNLCIT*LRDQGY
Trigger: GTAGCCTTGGTCTCTTAACCATGTAATACATAAGTT...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAAATCCAATAGTTACTTaGGAGGCACTTGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQNPIVT*EALEGV
Trigger: CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATT...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGCAGAAATCTCATTTaGGCAGAATGGCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASCRNLI*AEWPCV
Trigger: TACACAGGGCCATTCTGCTCAAATGAGATTTCTGCA...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGTTAATCATTATGTGGTaGAGTTGTCCATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVLIIMW*SCPSAM
Trigger: CATGGCTGATGGACAACTTCACCACATAATGATTAA...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp GGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGTGGAGAAGTGTCTGGAATaGCAAATTCACAGTAGATCA +
Preference number: 4 (lower is better)
Translates to: GVDKLRNPIVTWEALEGVEKCLE*QIHSRS
Trigger: TGATCTACTGTGAATTTGTCATTCCAGACACTTCTC...CACACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGTAGATCATTTAATATaGTATCTCCCCTTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: NECYEKYITGRGFLEPPQVDHLI*YLPLEC
Trigger: ACACTCTAAGGGGAGATAGCATATTAAATGATCTAC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAACATGTTCACATTTATTaGGCTCCCCCAAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQHVHIY*APPKDL
Trigger: AAGATCTTTTGGGGGAGCCCAATAAATGTGAACATG...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR TCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCATTCCCCACATCAAATaGAAAAGTCACTACTGTCGG +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASIPHIK*KSHYCR
Trigger: CCGACAGTAGTGACTTTTTCATTTGATGTGGGGAAT...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp AACAGTTTAGTTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGAGCTTCATATCACCATaGAATGAAGCAGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NSLVENILHSLGNWHYSGSFISP*NEAAWE
Trigger: CTCCCACGCTGCTTCATTTCATGGTGATATGAAGCT...CCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAACTAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAACACCATTTTTGGCAATaGTCACAGAAAGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQHHFWQ*SQKGIL
Trigger: AAGAATACCTTTCTGTGATCATTGCCAAAAATGGTG...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR TCA 90 bp ACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACTGTCACTCTATTGTTCCAGAATaGTCTGCAAACGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: TFYILWETGITQGLKYCHSIVPE*SANECV
Trigger: GACACACTCGTTTGCAGATCATTCTGGAACAATAGA...GTGACAGTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAATTCAGAGTTGAAGTCTaGGACTCAAAACCAAATGTA +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQFRVEV*DSKPNV
Trigger: TACATTTGGTTTTGAGTCTCAGACTTCAACTCTGAA...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp TTTTTGAGAAATTCACCCCATCGTTTCAGACGAGAAGTGTCTGGAATGACAAATAACACCTGTCTGAGATaGCACATGAGTCTATCTGAA +
Preference number: 4 (lower is better)
Translates to: FLRNSPHRFRREVSGMTNNTCLR*HMSLSE
Trigger: TTCAGATAGACTCATGTGGCATCTCAGACAGGTGTT...ATTTGTCATTCCAGACACTTCTCGTCTGAAACGATGGGGTGAATTTCTCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGCCATTTCTATGTTAAATCCTTCCCTTGTCACCATAGATCTTCCAATCAAATTCCAATTCTGCCCTTaGGGTTCCATTCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: NAISMLNPSLVTIDLPIKFQFCP*GSIPKG
Trigger: TCCCTTTGGAATGGAACCCCAAGGGCAGAATTGGAA...TTTGATTGGAAGATCTATGGTGACAAGGGAAGGATTTAACATAGAAATGGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGCCATTTCTATGTTAAATCCTTCCCTTGTCACCATAGATCTTCCAATCAAAGCAATCCAGTGTCATTaGTCCATTCATTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: NAISMLNPSLVTIDLPIKAIQCH*SIHSGQ
Trigger: CTGACCGGAATGAATGGACCAATGACACTGGATTGC...TTTGATTGGAAGATCTATGGTGACAAGGGAAGGATTTAACATAGAAATGGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACTGCATTTGCATTTCCTaGAAAACCCCAGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LKTFYILWETGITQGLKYCICIS*KTPDAV
Trigger: GACAGCATCTGGGGTTTTTCAGGAAATGCAAATGCA...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAATGTTAAATCATAGCTaGCAATCAGAAGAAGTACTC +
Preference number: 4 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQMLNHS*QSEEVL
Trigger: GAGTACTTCTTCTGATTGGCAGCTATGATTTAACAT...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR GCA 90 bp TGTACTGGAAGTCTATGCACAGCAAAATGTACACCTAAAGGGGTATATGTTTCATGTACTGGAAGTCTATaGACAGCAAAATGTACACCT +
Preference number: 4 (lower is better)
Translates to: CTGSLCTAKCTPKGVYVSCTGSL*TAKCTP
Trigger: AGGTGTACATTTTGCTGTGCATAGACTTCCAGTACA...TGAAACATATACCCCTTTAGGTGTACATTTTGCTGTGCATAGACTTCCAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp TCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGAAAAACCCAGCATATaGGTTCTCTGGATTAGTATT +
Preference number: 4 (lower is better)
Translates to: SGVDKLRNPIVTWEALEGEKPSI*VLWISI
Trigger: AATACTAATCCAGAGAACCCATATGCTGGGTTTTTC...ACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGCCATTTCTATGTTAAATCCTTCCCTTGTCACCATAGATCTTCCAATCAAAAAGATCAACCACTTCTaGTCTGTATGCACATCCGAA +
Preference number: 4 (lower is better)
Translates to: NAISMLNPSLVTIDLPIKKINHF*SVCTSE
Trigger: TTCGGATGTGCATACAGATCAGAAGTGGTTGATCTT...TTTGATTGGAAGATCTATGGTGACAAGGGAAGGATTTAACATAGAAATGGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACTTCTTAATTGCAGTGTaGTGTGATCTCCATTTGGCC +
Preference number: 4 (lower is better)
Translates to: LKTFYILWETGITQGLKYFLIAV*CDLHLA
Trigger: GGCCAAATGGAGATCACATCACACTGCAATTAAGAA...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp TCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTAGAATCCCATCACTCTaGATGGTTTTGAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: SGVDKLRNPIVTWEALEGRIPSL*MVLNFK
Trigger: TTTGAAATTCAAAACCATGCAGAGTGATGGGATTCT...ACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCGTGGACTTTTACATTTaGATCCAAAGCTTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASVDFYI*IQSFCQ
Trigger: CTGACAAAAGCTTTGGATCCAAATGTAAAAGTCCAC...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CCA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCGAAAAACCCAGCATATaGGTTCTCTGGATTAGTATT +
Preference number: 4 (lower is better)
Translates to: FLFHRMNAMRNISLDEASEKPSI*VLWISI
Trigger: AATACTAATCCAGAGAACCCATATGCTGGGTTTTTC...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR TCA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACCTTATAGGCTTCACATaGCTGCTCATAGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: LKTFYILWETGITQGLKYLIGFT*LLIDRV
Trigger: AACTCTATCTATGAGCAGTCATGTGAAGCCTATAAG...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp AATGCCATTTCTATGTTAAATCCTTCCCTTGTCACCATAGATCTTCCAATCAAAATTGTATATCACGGATaGGCCAGATCCAAAATATGC +
Preference number: 4 (lower is better)
Translates to: NAISMLNPSLVTIDLPIKIVYHG*ARSKIC
Trigger: GCATATTTTGGATCTGGCTCATCCGTGATATACAAT...TTTGATTGGAAGATCTATGGTGACAAGGGAAGGATTTAACATAGAAATGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp AACAGTTTAGTTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGGCTTTATTATGCTTGTaGCCACTGAAGATGCAAACA +
Preference number: 4 (lower is better)
Translates to: NSLVENILHSLGNWHYSGALLCL*PLKMQT
Trigger: TGTTTGCATCTTCAGTGGCCACAAGCATAATAAAGC...CCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAACTAAACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp TTTCAGACGAGAAGTGTCTGGAATGACAAATTCACAGTAGATCATTTAATATGCCAGACGAGAAGTGTCTaGAATGACAAATTCACAGTA +
Preference number: 4 (lower is better)
Translates to: FQTRSVWNDKFTVDHLICQTRSV*NDKFTV
Trigger: TACTGTGAATTTGTCATTCCAGACACTTCTCGTCTG...GCATATTAAATGATCTACTGTGAATTTGTCATTCCAGACACTTCTCGTCTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR TCA 90 bp TTTCAGACGAGAAGTGTCTGGAATGACAAATTCACAGTAGATCATTTAATATGCAAACCAATAAAGGACTaGTCTAGGTTTGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: FQTRSVWNDKFTVDHLICKPIKD*SRFGQN
Trigger: ATTTTGCCCAAACCTAGATCAGTCCTTTATTGGTTT...GCATATTAAATGATCTACTGTGAATTTGTCATTCCAGACACTTCTCGTCTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR GCA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACAGATATAATGATGTTTaGACTCAGCTTTGCATCGAA +
Preference number: 4 (lower is better)
Translates to: LKTFYILWETGITQGLKYRYNDV*TQLCIE
Trigger: TTCGATGCAAAGCTGAGTGCAAACATCATTATATCT...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CCA 90 bp AATGCCATTTCTATGTTAAATCCTTCCCTTGTCACCATAGATCTTCCAATCAAATCAAAAAGTATGTACTaGAAGTCTATGCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: NAISMLNPSLVTIDLPIKSKSMY*KSMHSK
Trigger: TTTGCTGTGCATAGACTTCCAGTACATACTTTTTGA...TTTGATTGGAAGATCTATGGTGACAAGGGAAGGATTTAACATAGAAATGGCATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS GCA 90 bp GTGTCCTGTAACAGTGACAGGGTCTGGGTGGCTGGGGTGCAGAGCTaGCTTCAGAGGGGCCACGTGGCTGAGCTGCACTGCAGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: VSCNSDRVWVAGVQS*LQRGHVAELHCREA
Trigger: TGCCTCTCTGCAGTGCAGCTCAGCCACGTGGCCCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTGTCACTGTTACAGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS GCA 90 bp TCAGTCACGTGTCCTGTAACAGTGACAGGGTCTGGGTGGCTGGGGTaGAGAGCTGCCTTCAGAGGGGCCACGTGGCTGAGCTGCACTGCA +
Preference number: 5 (lower is better)
Translates to: SVTCPVTVTGSGWLG*RAAFRGATWLSCTA
Trigger: TGCAGTGCAGCTCAGCCACGTGGCCCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTGTCACTGTTACAGGACACGTGACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CCA 90 bp ACCGCCGAGGCCACGCCCACTCCTCGCAGCAGCGGTCCCACAAATTaGCAGCAGCATCCTTCCTTCCAAACACACAACAGCGCTCGAGCT +
Preference number: 5 (lower is better)
Translates to: TAEATPTPRSSGPTN*QQHPSFQTHNSARA
Trigger: AGCTCGAGCGCTGTTGTGTGTTTGGAAGGAAGGATGCTGCTGCCAATTTGTGGGACCGCTGCTGCGAGGAGTGGGCGTGGCCTCGGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS CCA 90 bp CATACAGCTGGACTCAGTCACGTGTCCTGTAACAGTGACAGGGTCTaGGTGGCTGGGGTGCAGAGCTGCCTTCAGAGGGGCCACGTGGCT +
Preference number: 5 (lower is better)
Translates to: HTAGLSHVSCNSDRV*VAGVQSCLQRGHVA
Trigger: AGCCACGTGGCCCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTGTCACTGTTACAGGACACGTGACTGAGTCCAGCTGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAGCTACCATATCCCCCTaGAGTGGCCACAGCGGTGAC +
Preference number: 5 (lower is better)
Translates to: RGFLEPPQACTWQDGSAAATISP*SGHSGD
Trigger: GTCACCGCTGTGGCCACTCAAGGGGGATATGGTAGC...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCACTGCCCAGGGTGAGATaGACCAGGGTGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: RGFLEPPQACTWQDGSAALPRVR*TRVEVE
Trigger: TTCCACTTCCACCCTGGTCAATCTCACCCTGGGCAG...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCCTGCCCAGGGTGAGATaGACCAGGGTGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LPGATPSLYMARWQCCKPLPRVR*TRVEVE
Trigger: TTCCACTTCCACCCTGGTCAATCTCACCCTGGGCAG...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCGGGCGGGCTGTGTCTTaGGTGTCAGCTGATCCACTT +
Preference number: 5 (lower is better)
Translates to: GFLEPPQACTWQDGSAASGRAVS*VSADPL
Trigger: AAGTGGATCAGCTGACACCAAAGACACAGCCCGCCC...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCAGCGGTCCCACAAATaGGCAGCAGCATCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCQRSHK*AAASFL
Trigger: AAGGAAGGATGCTGCTGCCAATTTGTGGGACCGCTG...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR CAA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTCCCCCAAAAGATCTaGAGAGGCTCTCAGAGCGCT +
Preference number: 5 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCLPQKI*RGSQSA
Trigger: AGCGCTCTGAGAGCCTCTCAAGATCTTTTGGGGGAG...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp CCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATGCTACCATATCCCCCTaGAGTGGCCACAGCGGTGAC +
Preference number: 5 (lower is better)
Translates to: PQACTWQDGSAASPLPVHATISP*SGHSGD
Trigger: GTCACCGCTGTGGCCACTCAAGGGGGATATGGTAGC...ATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACACATGGTGCCACTGGTaGTCGTTGAAGTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHTWCHW*SLKWVG
Trigger: ACCCACCCACTTCAACGACAACCAGTGGCACCATGT...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTCCCCCAAAAGATCTaGAGAGGCTCTCAGAGCGCT +
Preference number: 5 (lower is better)
Translates to: FLEPPQACTWQDGSAASPLPQKI*RGSQSA
Trigger: AGCGCTCTGAGAGCCTCTCAAGATCTTTTGGGGGAG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCTGTCAGCTGATCCACTaGAAGGGAGGCCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCCQLIH*KGGLLH
Trigger: ATGAAGGAGGCCTCCCTTCAAGTGGATCAGCTGACA...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGTCCTCTTGGCGATATaGTTTCCAGTTCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: ATPSLYMARWQCCKPTACVLLAI*FPVPAT
Trigger: AGTGGCTGGAACTGGAAACAATATCGCCAAGAGGAC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGTGAAGTTGACTTGTTaGCCCAAACGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: ATPSLYMARWQCCKPTACVKLTC*PKRWMS
Trigger: GCTCATCCAGCGTTTGGGCAAACAAGTCAACTTCAC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCTCGTCCACTGTGAAGTaGACTTGTTTGCCCAAACGC +
Preference number: 5 (lower is better)
Translates to: GFLEPPQACTWQDGSAASSSTVK*TCLPKR
Trigger: GCGTTTGGGCAAACAAGTCAACTTCACAGTGGACGA...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCTCGTCCACTGTGAAGTaGACTTGTTTGCCCAAACGC +
Preference number: 5 (lower is better)
Translates to: LPGATPSLYMARWQCCKPSSTVK*TCLPKR
Trigger: GCGTTTGGGCAAACAAGTCAACTTCACAGTGGACGA...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTCGTCCACTGTGAAGTaGACTTGTTTGCCCAAACGC +
Preference number: 5 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHSSTVK*TCLPKR
Trigger: GCGTTTGGGCAAACAAGTCAACTTCACAGTGGACGA...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCATGTCAGCTGATCCACTaGAAGGGAGGCCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: FLEPPQACTWQDGSAASPCQLIH*KGGLLH
Trigger: ATGAAGGAGGCCTCCCTTCAAGTGGATCAGCTGACA...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACAAACAGAAGTAGCGTCTaGAGGACAGCTCCCGTGACA +
Preference number: 5 (lower is better)
Translates to: TPSLYMARWQCCKPTACTNRSSV*RTAPVT
Trigger: TGTCACGGGAGCTGTCCTCAAGACGCTACTTCTGTT...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCACTCTTCTATTCAGCCTaGCAAATCCAGGACCATGAC +
Preference number: 5 (lower is better)
Translates to: RGFLEPPQACTWQDGSAALFYSA*QIQDHD
Trigger: GTCATGGTCCTGGATTTGCAAGGCTGAATAGAAGAG...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTGCTACCATATCCCCCTaGAGTGGCCACAGCGGTGAC +
Preference number: 5 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIATISP*SGHSGD
Trigger: GTCACCGCTGTGGCCACTCAAGGGGGATATGGTAGC...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAGTCCTCTTGGCGATATaGTTTCCAGTTCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: FLEPPQACTWQDGSAASPVLLAI*FPVPAT
Trigger: AGTGGCTGGAACTGGAAACAATATCGCCAAGAGGAC...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCCAGATGCTGTCCTCTaGGCGATATTGTTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCPDAVL*AILFPV
Trigger: AACTGGAAACAATATCGCCAAGAGGACAGCATCTGG...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCCAGATGCTGTCCTCTaGGCGATATTGTTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHPDAVL*AILFPV
Trigger: AACTGGAAACAATATCGCCAAGAGGACAGCATCTGG...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCCACTGTGAAGTTGACTaGTTTGCCCAAACGCTGGAT +
Preference number: 5 (lower is better)
Translates to: LPGATPSLYMARWQCCKPHCEVD*FAQTLD
Trigger: ATCCAGCGTTTGGGCAAACAAGTCAACTTCACAGTG...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTGTTCCATCTTGCTTATaGACCAGCCGTGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: ATPSLYMARWQCCKPTACVPSCL*TSRDFL
Trigger: CAAGAAGTCACGGCTGGTCAATAAGCAAGATGGAAC...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp ACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCGTTCCATCTTGCTTATaGACCAGCCGTGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: TRLPGATPSLYMARWQCCVPSCL*TSRDFL
Trigger: CAAGAAGTCACGGCTGGTCAATAAGCAAGATGGAAC...GCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTAGCAATCCAGTGTCATaGGTCCATTCATTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: ATPSLYMARWQCCKPTACSNPVS*VHSFRS
Trigger: TGACCGGAATGAATGGACCAATGACACTGGATTGCT...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCAGCAATCCAGTGTCATaGGTCCATTCATTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GFLEPPQACTWQDGSAASSNPVS*VHSFRS
Trigger: TGACCGGAATGAATGGACCAATGACACTGGATTGCT...GCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCAAAAAGCAGCAAGCTaGGTGTTCGTGTTGTTCGGA +
Preference number: 5 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCQKAAS*VFVLFG
Trigger: TCCGAACAACACGAACACCAAGCTTGCTGCTTTTTG...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCAAAAAGCAGCAAGCTaGGTGTTCGTGTTGTTCGGA +
Preference number: 5 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHQKAAS*VFVLFG
Trigger: TCCGAACAACACGAACACCAAGCTTGCTGCTTTTTG...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTCAAAAAGCAGCAAGCTaGGTGTTCGTGTTGTTCGGA +
Preference number: 5 (lower is better)
Translates to: ATPSLYMARWQCCKPTACQKAAS*VFVLFG
Trigger: TCCGAACAACACGAACACCAAGCTTGCTGCTTTTTG...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAACTGCAGAGTCACTTTaGATTGCATTAGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: RGFLEPPQACTWQDGSAATAESL*IALARG
Trigger: GCCCCTTGCTAATGCAATCAAAAGTGACTCTGCAGT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS CCA 90 bp GCAAACGAGTGTGTCCTTTCCCTTGATGTGGCATCAGTGCCAGGCTaGGCCATACAGCTGGACTCAGTCACGTGTCCTGTAACAGTGACA +
Preference number: 5 (lower is better)
Translates to: ANECVLSLDVASVPG*AIQLDSVTCPVTVT
Trigger: TGTCACTGTTACAGGACACGTGACTGAGTCCAGCTGTATGGCCCAGCCTGGCACTGATGCCACATCAAGGGAAAGGACACACTCGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCAGCGGTCCCACAAATaGGCAGCAGCATCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCQRSHK*AAASFL
Trigger: AAGGAAGGATGCTGCTGCCAATTTGTGGGACCGCTG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR CAA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCCTCCCCCAAAAGATCTaGAGAGGCTCTCAGAGCGCT +
Preference number: 5 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVLPQKI*RGSQSA
Trigger: AGCGCTCTGAGAGCCTCTCAAGATCTTTTGGGGGAG...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCAGATGCTGTCCTCTaGGCGATATTGTTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: FLEPPQACTWQDGSAASPPDAVL*AILFPV
Trigger: AACTGGAAACAATATCGCCAAGAGGACAGCATCTGG...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACAGTGAAGTTGACTTGTTaGCCCAAACGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: TPSLYMARWQCCKPTACTVKLTC*PKRWMS
Trigger: GCTCATCCAGCGTTTGGGCAAACAAGTCAACTTCAC...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTCAAGATTCATGAGATaGAATTCTCCCCGTGCATGG +
Preference number: 5 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHSRFMR*NSPRAW
Trigger: CCATGCACGGGGAGAATTCAATCTCATGAATCTTGA...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTACATGGTGCCACTGGTaGTCGTTGAAGTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCTWCHW*SLKWVG
Trigger: ACCCACCCACTTCAACGACAACCAGTGGCACCATGT...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS CCA 90 bp CGTCTTGAGGACAGCTCCCGTGACAGATCCCATGTTCACATTTATTaGGCTCCCCCAAAAGATCTTGAGAGGCTCTCAGAGCGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RLEDSSRDRSHVHIY*APPKDLERLSERSS
Trigger: ACTGGAGCGCTCTGAGAGCCTCTCAAGATCTTTTGGGGGAGCCCAATAAATGTGAACATGGGATCTGTCACGGGAGCTGTCCTCAAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCAACAGAAGTAGCGTCTaGAGGACAGCTCCCGTGACA +
Preference number: 5 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVNRSSV*RTAPVT
Trigger: TGTCACGGGAGCTGTCCTCAAGACGCTACTTCTGTT...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGGGCTCAGGGATTTTaGATCAAATCTGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHWAQGF*IKSVEK
Trigger: CTTCTCTACAGATTTGATCAAAAATCCCTGAGCCCA...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CAGACCACAGAGGACTGTGAGGCTTCACCAATAAACCTCCCTAGAGTTCAGCTACTGCCCAGGGTGAGATaGACCAGGGTGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: QTTEDCEASPINLPRVQLLPRVR*TRVEVE
Trigger: TTCCACTTCCACCCTGGTCAATCTCACCCTGGGCAG...TAGCTGAACTCTAGGGAGGTTTATTGGTGAAGCCTCACAGTCCTCTGTGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCATGTGGTTTTTGCTGCTaGGCCAAATCAATGATATCC +
Preference number: 5 (lower is better)
Translates to: RGFLEPPQACTWQDGSAACGFCC*AKSMIS
Trigger: GGATATCATTGATTTGGCCAAGCAGCAAAAACCACA...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCTGTGGTTTTTGCTGCTaGGCCAAATCAATGATATCC +
Preference number: 5 (lower is better)
Translates to: WSHPKPVHGKMAVLQAHCCGFCC*AKSMIS
Trigger: GGATATCATTGATTTGGCCAAGCAGCAAAAACCACA...GCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTTTGGATCCAAAGCTTTaGTCAGGACAACCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: ATPSLYMARWQCCKPTACLDPKL*SGQPPK
Trigger: TTTTGGAGGTTGTCCTGACAAAAGCTTTGGATCCAA...ACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTACATGGTGCCACTGGTaGTCGTTGAAGTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSITWCHW*SLKWVG
Trigger: ACCCACCCACTTCAACGACAACCAGTGGCACCATGT...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCTGTCAGCTGATCCACTaGAAGGGAGGCCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVCQLIH*KGGLLH
Trigger: ATGAAGGAGGCCTCCCTTCAAGTGGATCAGCTGACA...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCAATGCAGAAATCTCATTaGAGCAGAATGGCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: FLEPPQACTWQDGSAASPMQKSH*SRMALC
Trigger: ACACAGGGCCATTCTGCTCAAATGAGATTTCTGCAT...TGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACAATGATCTGTGGTTTTaGCTGCTTGGCCAAATCAAT +
Preference number: 5 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHNDLWF*LLGQIN
Trigger: ATTGATTTGGCCAAGCAGCAAAAACCACAGATCATT...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAATGATCTGTGGTTTTaGCTGCTTGGCCAAATCAAT +
Preference number: 5 (lower is better)
Translates to: RGFLEPPQACTWQDGSAANDLWF*LLGQIN
Trigger: ATTGATTTGGCCAAGCAGCAAAAACCACAGATCATT...TGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTGTCAGCTGATCCACTaGAAGGGAGGCCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: CLWPLKMQTPATQDLRSICQLIH*KGGLLH
Trigger: ATGAAGGAGGCCTCCCTTCAAGTGGATCAGCTGACA...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTGGGCGGGCTGTGTCTTaGGTGTCAGCTGATCCACTT +
Preference number: 5 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFGRAVS*VSADPL
Trigger: AAGTGGATCAGCTGACACCAAAGACACAGCCCGCCC...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGGGCGGGCTGTGTCTTaGGTGTCAGCTGATCCACTT +
Preference number: 5 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPGRAVS*VSADPL
Trigger: AAGTGGATCAGCTGACACCAAAGACACAGCCCGCCC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACCTTGTATGTTCAGAGTaGAAGTCTGAGACTCAAAAC +
Preference number: 5 (lower is better)
Translates to: SWSHPKPVHGKMAVLQAHLVCSE*KSETQN
Trigger: GTTTTGAGTCTCAGACTTCAACTCTGAACATACAAG...GTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp CAGACCACAGAGGACTGTGAGGCTTCACCAATAAACCTCCCTAGAGTTCAGCTAAACAGAAGTAGCGTCTaGAGGACAGCTCCCGTGACA +
Preference number: 5 (lower is better)
Translates to: QTTEDCEASPINLPRVQLNRSSV*RTAPVT
Trigger: TGTCACGGGAGCTGTCCTCAAGACGCTACTTCTGTT...TAGCTGAACTCTAGGGAGGTTTATTGGTGAAGCCTCACAGTCCTCTGTGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTGTCCTCTTGGCGATATaGTTTCCAGTTCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIVLLAI*FPVPAT
Trigger: AGTGGCTGGAACTGGAAACAATATCGCCAAGAGGAC...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCACCAGATGCTGTCCTCTaGGCGATATTGTTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAPDAVL*AILFPV
Trigger: AACTGGAAACAATATCGCCAAGAGGACAGCATCTGG...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTCGCAGAAATCTGGCTTaGATAGAAGGCTGGAGTCTA +
Preference number: 5 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCRRNLA*IEGWSL
Trigger: TAGACTCCAGCCTTCTATCAAAGCCAGATTTCTGCG...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CTTCCTGGAGCCACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCGCAGTTTCGGTCATATaGCAATATAGAAGAAATGGT +
Preference number: 5 (lower is better)
Translates to: LPGATPSLYMARWQCCKPAVSVI*QYRRNG
Trigger: ACCATTTCTTCTATATTGCAATATGACCGAAACTGC...GGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGTGGCTCCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCCAAAAAGCAGCAAGCTaGGTGTTCGTGTTGTTCGGA +
Preference number: 5 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVQKAAS*VFVLFG
Trigger: TCCGAACAACACGAACACCAAGCTTGCTGCTTTTTG...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp ACCCCAAGCCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACAGCTCTCTGTCATCTATaGTTCCAGAATGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: TPSLYMARWQCCKPTACTALCHL*FQNDLQ
Trigger: TTGCAGATCATTCTGGAACAATAGATGACAGAGAGC...TGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGGCTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACTCTTCTATTCAGCCTaGCAAATCCAGGACCATGAC +
Preference number: 5 (lower is better)
Translates to: AMRNISLDEASWSHPKPVLFYSA*QIQDHD
Trigger: GTCATGGTCCTGGATTTGCAAGGCTGAATAGAAGAG...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTGTTAAGTCAGAGCCGTaGTGCTGTATGATGGTCCAT +
Preference number: 5 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIVKSEP*CCMMVH
Trigger: ATGGACCATCATACAGCACAACGGCTCTGACTTAAC...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTGTTCCATCTTGCTTATaGACCAGCCGTGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIVPSCL*TSRDFL
Trigger: CAAGAAGTCACGGCTGGTCAATAAGCAAGATGGAAC...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTACTGCAGAGTCACTTTaGATTGCATTAGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSITAESL*IALARG
Trigger: GCCCCTTGCTAATGCAATCAAAAGTGACTCTGCAGT...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS GCA 90 bp AGTCACAAAAGAACCCAATGGGTCTTTCTCTGCATTTCCCTCCATTaGGGCATAACTTCCCATAGCTGCTGCAATGTCCCCTACAACCTG +
Preference number: 5 (lower is better)
Translates to: SHKRTQWVFLCISLH*GITSHSCCNVPYNL
Trigger: CAGGTTGTAGGGGACATTGCAGCAGCTATGGGAAGTTATGCCGCAATGGAGGGAAATGCAGAGAAAGACCCATTGGGTTCTTTTGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp TCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCACTTGAAGGTGCTACCATATCCCCCTaGAGTGGCCACAGCGGTGAC +
Preference number: 5 (lower is better)
Translates to: SGVDKLRNPIVTWEALEGATISP*SGHSGD
Trigger: GTCACCGCTGTGGCCACTCAAGGGGGATATGGTAGC...ACCTTCAAGTGCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTTGGGCTCAGGGATTTTaGATCAAATCTGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCWAQGF*IKSVEK
Trigger: CTTCTCTACAGATTTGATCAAAAATCCCTGAGCCCA...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTTCGTCCACTGTGAAGTaGACTTGTTTGCCCAAACGC +
Preference number: 5 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFSSTVK*TCLPKR
Trigger: GCGTTTGGGCAAACAAGTCAACTTCACAGTGGACGA...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTTCAAGATTCATGAGATaGAATTCTCCCCGTGCATGG +
Preference number: 5 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSISRFMR*NSPRAW
Trigger: CCATGCACGGGGAGAATTCAATCTCATGAATCTTGA...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTATCAAGATTCATGAGATaGAATTCTCCCCGTGCATGG +
Preference number: 5 (lower is better)
Translates to: AMRNISLDEASWSHPKPVSRFMR*NSPRAW
Trigger: CCATGCACGGGGAGAATTCAATCTCATGAATCTTGA...TACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTATCAGATCTACCACTTaGCCGCTGATAGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIIRSTT*PLIEMS
Trigger: GCTCATTTCTATCAGCGGCAAAGTGGTAGATCTGAT...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCGTTAAGTCAGAGCCGTaGTGCTGTATGATGGTCCAT +
Preference number: 5 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSVKSEP*CCMMVH
Trigger: ATGGACCATCATACAGCACAACGGCTCTGACTTAAC...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTATGCAGAAATCTCATTaGAGCAGAATGGCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSIMQKSH*SRMALC
Trigger: ACACAGGGCCATTCTGCTCAAATGAGATTTCTGCAT...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCACTGCAGAGTCACTTTaGATTGCATTAGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSTAESL*IALARG
Trigger: GCCCCTTGCTAATGCAATCAAAAGTGACTCTGCAGT...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGTCCTCTTGGCGATATaGTTTCCAGTTCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: NECYEKYITGRGFLEPPQVLLAI*FPVPAT
Trigger: AGTGGCTGGAACTGGAAACAATATCGCCAAGAGGAC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCGCAGAAATCTGGCTTaGATAGAAGGCTGGAGTCTA +
Preference number: 5 (lower is better)
Translates to: MNAMRNISLDEASWSHPKRRNLA*IEGWSL
Trigger: TAGACTCCAGCCTTCTATCAAAGCCAGATTTCTGCG...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCACGCAGAAATCTGGCTTaGATAGAAGGCTGGAGTCTA +
Preference number: 5 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPRRNLA*IEGWSL
Trigger: TAGACTCCAGCCTTCTATCAAAGCCAGATTTCTGCG...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTGGGCTCAGGGATTTTaGATCAAATCTGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: CLWPLKMQTPATQDLRSIWAQGF*IKSVEK
Trigger: CTTCTCTACAGATTTGATCAAAAATCCCTGAGCCCA...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCACTGTGAAGTTGACTaGTTTGCCCAAACGCTGGAT +
Preference number: 5 (lower is better)
Translates to: MNAMRNISLDEASWSHPKHCEVD*FAQTLD
Trigger: ATCCAGCGTTTGGGCAAACAAGTCAACTTCACAGTG...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCCTGTACATGGCAATTCCAAGTTCGAAATaGAAAAGTGGCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: EIYHWTRLPGATPSLYMAIPSSK*KSGRNL
Trigger: GAGGTTTCTGCCACTTTTCAATTTCGAACTTGGAAT...TGCCATGTACAGGCTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTTGGATCCAAAGCTTTaGTCAGGACAACCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: CLWPLKMQTPATQDLRSILDPKL*SGQPPK
Trigger: TTTTGGAGGTTGTCCTGACAAAAGCTTTGGATCCAA...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGAGCAATCCAGTGTCATaGGTCCATTCATTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: MNAMRNISLDEASWSHPKSNPVS*VHSFRS
Trigger: TGACCGGAATGAATGGACCAATGACACTGGATTGCT...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTCCAGGTCTGCAAATCACCATTTTaGGCAATGATCACAGAAAGG +
Preference number: 5 (lower is better)
Translates to: ATEDANTGHTGSEKHFQVCKSPF*AMITER
Trigger: CCTTTCTGTGATCATTGCCAAAAATGGTGATTTGCA...GACCTGGAAATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR CAA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGACTGCAGAGTCACTTTaGATTGCATTAGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: MNAMRNISLDEASWSHPKTAESL*IALARG
Trigger: GCCCCTTGCTAATGCAATCAAAAGTGACTCTGCAGT...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS TCA 90 bp AGTTTTCCATCACTCAGAAAGAGGAGGATACCCCCTGAAATCAGCTaGAGTTCACTGAACAGCAGAAGCCCTGCCTTATTCCAAGTTCGA +
Preference number: 5 (lower is better)
Translates to: SFPSLRKRRIPPEIS*SSLNSRSPALFQVR
Trigger: TCGAACTTGGAATAAGGCAGGGCTTCTGCTGTTCAGTGAACTTCAGCTGATTTCAGGGGGTATCCTCCTCTTTCTGAGTGATGGAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp GAGGCTTCACCAATAAACCTCCCTAGAGTTCAGCTACCAATGAGGTTAATACCGCGCAGAAATCTGGCTTaGATAGAAGGCTGGAGTCTA +
Preference number: 5 (lower is better)
Translates to: EASPINLPRVQLPMRLIPRRNLA*IEGWSL
Trigger: TAGACTCCAGCCTTCTATCAAAGCCAGATTTCTGCG...CGGTATTAACCTCATTGGTAGCTGAACTCTAGGGAGGTTTATTGGTGAAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCCTGCCCAGGGTGAGATaGACCAGGGTGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: FLFHRMNAMRNISLDEASLPRVR*TRVEVE
Trigger: TTCCACTTCCACCCTGGTCAATCTCACCCTGGGCAG...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAACACTGTGAAGTTGACTaGTTTGCCCAAACGCTGGAT +
Preference number: 5 (lower is better)
Translates to: NECYEKYITGRGFLEPPQHCEVD*FAQTLD
Trigger: ATCCAGCGTTTGGGCAAACAAGTCAACTTCACAGTG...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCTTGGATCCAAAGCTTTaGTCAGGACAACCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: AVLQAHCLYIQCKSIRFSLDPKL*SGQPPK
Trigger: TTTTGGAGGTTGTCCTGACAAAAGCTTTGGATCCAA...GGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTATCAGATCTACCACTTaGCCGCTGATAGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: WQCCKPTACTFSVRAFVFIRSTT*PLIEMS
Trigger: GCTCATTTCTATCAGCGGCAAAGTGGTAGATCTGAT...AAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGATCAGATCTACCACTTaGCCGCTGATAGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: MNAMRNISLDEASWSHPKIRSTT*PLIEMS
Trigger: GCTCATTTCTATCAGCGGCAAAGTGGTAGATCTGAT...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CCTGTACATGGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTGCAGTTTCGGTCATATaGCAATATAGAAGAAATGGT +
Preference number: 5 (lower is better)
Translates to: PVHGKMAVLQAHCLYIQCAVSVI*QYRRNG
Trigger: ACCATTTCTTCTATATTGCAATATGACCGAAACTGC...ACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCCATGTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAATGCAGAAATCTCATTaGAGCAGAATGGCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPMQKSH*SRMALC
Trigger: ACACAGGGCCATTCTGCTCAAATGAGATTTCTGCAT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp GGCAAGATGGCAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTTGCAAATCACCATTTTaGGCAATGATCACAGAAAGG +
Preference number: 5 (lower is better)
Translates to: GKMAVLQAHCLYIQCKSICKSPF*AMITER
Trigger: CCTTTCTGTGATCATTGCCAAAAATGGTGATTTGCA...AATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTGCCATCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS-3UTR CAA 90 bp TGCTTGTGGCCACTGAAGATGCAAACACCGGCCACACAGGATCTGAGAAGCATTTGTTTGCACTCAGCTTaGCATCGAATAAATAATGCC +
Preference number: 5 (lower is better)
Translates to: CLWPLKMQTPATQDLRSICLHSA*HRINNA
Trigger: GGCATTATTTATTCGATGCAAAGCTGAGTGCAAACA...AATGCTTCTCAGATCCTGTGTGGCCGGTGTTTGCATCTTCAGTGGCCACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS TCA 90 bp CCTCAAAGTGTGATCTGTAGACGTGTAGTGGTCCCTGGGACACTTTaGGAGGGCACAGGGGCTCAAAACTATTTCATGATAATTCTAAGA +
Preference number: 5 (lower is better)
Translates to: PQSVICRRVVVPGTL*EGTGAQNYFMIILR
Trigger: TCTTAGAATTATCATGAAATAGTTTTGAGCCCCTGTGCCCTCTCAAAGTGTCCCAGGGACCACTACACGTCTACAGATCACACTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619533.1
CDS GCA 90 bp CAGAAATCTCATTTGAGCAGAATGGCCCTGTGTATGCAGAGAAAGTaGAGTCACAAAAGAACCCAATGGGTCTTTCTCTGCATTTCCCTC +
Preference number: 5 (lower is better)
Translates to: QKSHLSRMALCMQRK*SHKRTQWVFLCISL
Trigger: GAGGGAAATGCAGAGAAAGACCCATTGGGTTCTTTTGTGACTGCACTTTCTCTGCATACACAGGGCCATTCTGCTCAAATGAGATTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CCA 90 bp GCCGCTGATAGAAATGAGCCTCATACATCCCTGAAATCCACCAAGTaGACTTTTACATTTGGATCCAAAGCTTTTGTCAGGACAACCTCC +
Preference number: 5 (lower is better)
Translates to: AADRNEPHTSLKSTK*TFTFGSKAFVRTTS
Trigger: GGAGGTTGTCCTGACAAAAGCTTTGGATCCAAATGTAAAAGTCCACTTGGTGGATTTCAGGGATGTATGAGGCTCATTTCTATCAGCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAGTGAAGTTGACTTGTTaGCCCAAACGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQVKLTC*PKRWMS
Trigger: GCTCATCCAGCGTTTGGGCAAACAAGTCAACTTCAC...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGTTGGATCCAAAGCTTTaGTCAGGACAACCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: MNAMRNISLDEASWSHPKLDPKL*SGQPPK
Trigger: TTTTGGAGGTTGTCCTGACAAAAGCTTTGGATCCAA...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TTTTTGAGAAATTCACCCCATCGTTTCAGACGAGAAGTGTCTGGAATGACAAATACATGGTGCCACTGGTaGTCGTTGAAGTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: FLRNSPHRFRREVSGMTNTWCHW*SLKWVG
Trigger: ACCCACCCACTTCAACGACAACCAGTGGCACCATGT...ATTTGTCATTCCAGACACTTCTCGTCTGAAACGATGGGGTGAATTTCTCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp ATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGGCTCTCTGTCATCTATaGTTCCAGAATGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: MNAMRNISLDEASWSHPKALCHL*FQNDLQ
Trigger: TTGCAGATCATTCTGGAACAATAGATGACAGAGAGC...CTTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGCTCTCTGTCATCTATaGTTCCAGAATGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPALCHL*FQNDLQ
Trigger: TTGCAGATCATTCTGGAACAATAGATGACAGAGAGC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS TCA 90 bp ATTCGACTTAAGTTTTCCATCACTCAGAAAGAGGAGGATACCCCCTaGAATCAGCTGAAGTTCACTGAACAGCAGAAGCCCTGCCTTATT +
Preference number: 5 (lower is better)
Translates to: IRLKFSITQKEEDTP*NQLKFTEQQKPCLI
Trigger: AATAAGGCAGGGCTTCTGCTGTTCAGTGAACTTCAGCTGATTTCAGGGGGTATCCTCCTCTTTCTGAGTGATGGAAAACTTAAGTCGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAATTCCAAGTTCGAAATaGAAAAGTGGCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPIPSSK*KSGRNL
Trigger: GAGGTTTCTGCCACTTTTCAATTTCGAACTTGGAAT...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAGTTAAGTCAGAGCCGTaGTGCTGTATGATGGTCCAT +
Preference number: 5 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQVKSEP*CCMMVH
Trigger: ATGGACCATCATACAGCACAACGGCTCTGACTTAAC...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCTCTCTGTCATCTATaGTTCCAGAATGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: NECYEKYITGRGFLEPPQALCHL*FQNDLQ
Trigger: TTGCAGATCATTCTGGAACAATAGATGACAGAGAGC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS GCA 90 bp CACAACAGCTATCAGACCTCCAATTACTGCAGAGTCACTTTTGATTaGATTAGCAAGGGGCTCTCTGTCATCTATTGTTCCAGAATGATC +
Preference number: 5 (lower is better)
Translates to: HNSYQTSNYCRVTFD*ISKGLSVIYCSRMI
Trigger: GATCATTCTGGAACAATAGATGACAGAGAGCCCCTTGCTAATGCAATCAAAAGTGACTCTGCAGTAATTGGAGGTCTGATAGCTGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCGTGAAGTTGACTTGTTaGCCCAAACGCTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: FLFHRMNAMRNISLDEASVKLTC*PKRWMS
Trigger: GCTCATCCAGCGTTTGGGCAAACAAGTCAACTTCAC...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAATTCCAAGTTCGAAATaGAAAAGTGGCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: NECYEKYITGRGFLEPPQIPSSK*KSGRNL
Trigger: GAGGTTTCTGCCACTTTTCAATTTCGAACTTGGAAT...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp CAGTGCTGCAAGCCCACTGCCTGTACATTCAGTGTAAGAGCATTCGTTTTTCCAGATTTAGTCAGGCATTaGCAGAAACATCAATATGGA +
Preference number: 5 (lower is better)
Translates to: QCCKPTACTFSVRAFVFPDLVRH*QKHQYG
Trigger: TCCATATTGATGTTTCTGCAAATGCCTGACTAAATC...TGGAAAAACGAATGCTCTTACACTGAATGTACAGGCAGTGGGCTTGCAGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS TCA 90 bp AGATCTACCACTTTGCCGCTGATAGAAATGAGCCTCATACATCCCTaGAATCCACCAAGTGGACTTTTACATTTGGATCCAAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: RSTTLPLIEMSLIHP*NPPSGLLHLDPKLL
Trigger: CAAAAGCTTTGGATCCAAATGTAAAAGTCCACTTGGTGGATTTCAGGGATGTATGAGGCTCATTTCTATCAGCGGCAAAGTGGTAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCCTCTTCTATTCAGCCTaGCAAATCCAGGACCATGAC +
Preference number: 5 (lower is better)
Translates to: FLFHRMNAMRNISLDEASLFYSA*QIQDHD
Trigger: GTCATGGTCCTGGATTTGCAAGGCTGAATAGAAGAG...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp AATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGAGCCACCCCAAGCAGTTTCGGTCATATaGCAATATAGAAGAAATGGT +
Preference number: 5 (lower is better)
Translates to: NECYEKYITGRGFLEPPQAVSVI*QYRRNG
Trigger: ACCATTTCTTCTATATTGCAATATGACCGAAACTGC...TTGGGGTGGCTCCAGGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TGTACTGGAAGTCTATGCACAGCAAAATGTACACCTAAAGGGGTATATGTTTCAAGCAATCCAGTGTCATaGGTCCATTCATTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: CTGSLCTAKCTPKGVYVSSNPVS*VHSFRS
Trigger: TGACCGGAATGAATGGACCAATGACACTGGATTGCT...TGAAACATATACCCCTTTAGGTGTACATTTTGCTGTGCATAGACTTCCAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTCAAGATTCATGAGATaGAATTCTCCCCGTGCATGG +
Preference number: 5 (lower is better)
Translates to: FLFHRMNAMRNISLDEASSRFMR*NSPRAW
Trigger: CCATGCACGGGGAGAATTCAATCTCATGAATCTTGA...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TCCCGATTCTTCTGGTGTAGACAAACTAAGAAATCCAATAGTTACTTGGGAGGCATTCCAAGTTCGAAATaGAAAAGTGGCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: SRFFWCRQTKKSNSYLGGIPSSK*KSGRNL
Trigger: GAGGTTTCTGCCACTTTTCAATTTCGAACTTGGAAT...GCCTCCCAAGTAACTATTGGATTTCTTAGTTTGTCTACACCAGAAGAATCGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCATGCAGAAATCTCATTaGAGCAGAATGGCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: FLFHRMNAMRNISLDEASMQKSH*SRMALC
Trigger: ACACAGGGCCATTCTGCTCAAATGAGATTTCTGCAT...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS GCA 90 bp TTCTCTGGATTAGTATTTCTGACTCTTGTTAAGTCAGAGCCGTTGTaGTGTATGATGGTCCATGCAGTTTCGGTCATATTGCAATATAGA +
Preference number: 5 (lower is better)
Translates to: FSGLVFLTLVKSEPL*CMMVHAVSVILQYR
Trigger: TCTATATTGCAATATGACCGAAACTGCATGGACCATCATACAGCACAACGGCTCTGACTTAACAAGAGTCAGAAATACTAATCCAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS-3UTR CAA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACCTCTTCTATTCAGCCTaGCAAATCCAGGACCATGAC +
Preference number: 5 (lower is better)
Translates to: LKTFYILWETGITQGLKYLFYSA*QIQDHD
Trigger: GTCATGGTCCTGGATTTGCAAGGCTGAATAGAAGAG...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCTGGGCTCAGGGATTTTaGATCAAATCTGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: FLFHRMNAMRNISLDEASWAQGF*IKSVEK
Trigger: CTTCTCTACAGATTTGATCAAAAATCCCTGAGCCCA...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TTGAAAACATTTTACATTCTTTGGGAAACTGGCATTACTCAGGGTCTTAAGTACCACTGTGAAGTTGACTaGTTTGCCCAAACGCTGGAT +
Preference number: 5 (lower is better)
Translates to: LKTFYILWETGITQGLKYHCEVD*FAQTLD
Trigger: ATCCAGCGTTTGGGCAAACAAGTCAACTTCACAGTG...GTACTTAAGACCCTGAGTAATGCCAGTTTCCCAAAGAATGTAAAATGTTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp AGCATTTCCAGGTCTATGAATAACACCACGAGGAGACAAAAGCAAACACAGCAAGCAGTTTCGGTCATATaGCAATATAGAAGAAATGGT +
Preference number: 5 (lower is better)
Translates to: SISRSMNNTTRRQKQTQQAVSVI*QYRRNG
Trigger: ACCATTTCTTCTATATTGCAATATGACCGAAACTGC...TTGCTGTGTTTGCTTTTGTCTCCTCGTGGTGTTATTCATAGACCTGGAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS-3UTR CAA 90 bp TTTCAGACGAGAAGTGTCTGGAATGACAAATTCACAGTAGATCATTTAATATGCGTTCCATCTTGCTTATaGACCAGCCGTGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: FQTRSVWNDKFTVDHLICVPSCL*TSRDFL
Trigger: CAAGAAGTCACGGCTGGTCAATAAGCAAGATGGAAC...GCATATTAAATGATCTACTGTGAATTTGTCATTCCAGACACTTCTCGTCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS-3UTR CAA 90 bp TTCTTGTTCCATAGAATGAATGCTATGAGAAATATATCACTGGACGAGGCTTCCAATGATCTGTGGTTTTaGCTGCTTGGCCAAATCAAT +
Preference number: 5 (lower is better)
Translates to: FLFHRMNAMRNISLDEASNDLWF*LLGQIN
Trigger: ATTGATTTGGCCAAGCAGCAAAAACCACAGATCATT...GGAAGCCTCGTCCAGTGATATATTTCTCATAGCATTCATTCTATGGAACAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000476707.1
ENST00000611870.5
CDS-3UTR CAA 90 bp TTTCAGACGAGAAGTGTCTGGAATGACAAATTCACAGTAGATCATTTAATATGCTGTGGTTTTTGCTGCTaGGCCAAATCAATGATATCC +
Preference number: 5 (lower is better)
Translates to: FQTRSVWNDKFTVDHLICCGFCC*AKSMIS
Trigger: GGATATCATTGATTTGGCCAAGCAGCAAAAACCACA...GCATATTAAATGATCTACTGTGAATTTGTCATTCCAGACACTTCTCGTCTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611870.5
CDS GCA 72 bp AACAGTGACAGGGTCTGGGTGGCTGGGGTGCAGAGCTaGCTTCAGAGGGGCCACGTGGCTGAGCTGCACTGC +
Preference number: 6 (lower is better)
Translates to: NSDRVWVAGVQS*LQRGHVAELHC
Trigger: GCAGTGCAGCTCAGCCACGTGGCCCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTGTCACTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CCA 72 bp GGACTCAGTCACGTGTCCTGTAACAGTGACAGGGTCTaGGTGGCTGGGGTGCAGAGCTGCCTTCAGAGGGGC +
Preference number: 6 (lower is better)
Translates to: GLSHVSCNSDRV*VAGVQSCLQRG
Trigger: GCCCCTCTGAAGGCAGCTCTGCACCCCAGCCACCCAGACCCTGTCACTGTTACAGGACACGTGACTGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CCA 72 bp GCCACGCCCACTCCTCGCAGCAGCGGTCCCACAAATTaGCAGCAGCATCCTTCCTTCCAAACACACAACAGC +
Preference number: 6 (lower is better)
Translates to: ATPTPRSSGPTN*QQHPSFQTHNS
Trigger: GCTGTTGTGTGTTTGGAAGGAAGGATGCTGCTGCCAATTTGTGGGACCGCTGCTGCGAGGAGTGGGCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307431.12
ENST00000377504.8
CDS CAA 90 bp CCCATCAGCGGGGGCGGGCTGTGTCTTTGGTGTCAGCTGATCCACTaGAAGGGAGGCCTCCTTCATGTTCCTTTCAACCCTCACATGGTG +
Preference number: 6 (lower is better)
Translates to: PISGGGLCLWCQLIH*KGGLLHVPFNPHMV
Trigger: CACCATGTGAGGGTTGAAAGGAACATGAAGGAGGCCTCCCTTCAAGTGGATCAGCTGACACCAAAGACACAGCCCGCCCCCGCTGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS GCA 72 bp CAAACGAGTGTGTCCTTTCCCTTGATGTGGCATCAGTaGCAGGCTGGGCCATACAGCTGGACTCAGTCACGT +
Preference number: 6 (lower is better)
Translates to: QTSVSFPLMWHQ*QAGPYSWTQSR
Trigger: ACGTGACTGAGTCCAGCTGTATGGCCCAGCCTGGCACTGATGCCACATCAAGGGAAAGGACACACTCGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS GCA 72 bp AGACCAGCCACCAGCTCCATCTCTTCTATTCAGCCTTaGAAATCCAGGACCATGACTGCTGGAGAGCTCGGA +
Preference number: 6 (lower is better)
Translates to: RPATSSISSIQP*KSRTMTAGELG
Trigger: TCCGAGCTCTCCAGCAGTCATGGTCCTGGATTTGCAAGGCTGAATAGAAGAGATGGAGCTGGTGGCTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000463177.1
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CAA 90 bp GTGACAGATCCCATGTTCACATTTATTGGGCTCCCCCAAAAGATCTaGAGAGGCTCTCAGAGCGCTCCAGTCCTCTTCTCAGTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: VTDPMFTFIGLPQKI*RGSQSAPVLFSVAL
Trigger: CAGAGCTACTGAGAAGAGGACTGGAGCGCTCTGAGAGCCTCTCAAGATCTTTTGGGGGAGCCCAATAAATGTGAACATGGGATCTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS TCA 72 bp CCATGTTCACATTTATTGGGCTCCCCCAAAAGATCTTaGGAGGCTCTCAGAGCGCTCCAGTCCTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: PCSHLLGSPKRS*EALRALQSSSQ
Trigger: CTGAGAAGAGGACTGGAGCGCTCTGAGAGCCTCTCAAGATCTTTTGGGGGAGCCCAATAAATGTGAACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS GCA 72 bp AGAACCCAATGGGTCTTTCTCTGCATTTCCCTCCATTaGGGCATAACTTCCCATAGCTGCTGCAATGTCCCC +
Preference number: 6 (lower is better)
Translates to: RTQWVFLCISLH*GITSHSCCNVP
Trigger: GGGGACATTGCAGCAGCTATGGGAAGTTATGCCGCAATGGAGGGAAATGCAGAGAAAGACCCATTGGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CAA 72 bp CCCATGTTCACATTTATTGGGCTCCCCCAAAAGATCTaGAGAGGCTCTCAGAGCGCTCCAGTCCTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: PMFTFIGLPQKI*RGSQSAPVLFS
Trigger: TGAGAAGAGGACTGGAGCGCTCTGAGAGCCTCTCAAGATCTTTTGGGGGAGCCCAATAAATGTGAACATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000611870.5
CDS CCA 72 bp CACAAGAGGATCATCACAGTCATAGTTCCACATAGCTaGGAAGGCCTCAGAATCATGGCGGCTGCAAGAGAA +
Preference number: 6 (lower is better)
Translates to: HKRIITVIVPHS*EGLRIMAAARE
Trigger: TTCTCTTGCAGCCGCCATGATTCTGAGGCCTTCCCAGCTATGTGGAACTATGACTGTGATGATCCTCTTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471618.5
CDS TCA 72 bp TCACTCAGAAAGAGGAGGATACCCCCTGAAATCAGCTaGAGTTCACTGAACAGCAGAAGCCCTGCCTTATTC +
Preference number: 6 (lower is better)
Translates to: SLRKRRIPPEIS*SSLNSRSPALF
Trigger: GAATAAGGCAGGGCTTCTGCTGTTCAGTGAACTTCAGCTGATTTCAGGGGGTATCCTCCTCTTTCTGAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS TCA 72 bp GTGATCTGTAGACGTGTAGTGGTCCCTGGGACACTTTaGGAGGGCACAGGGGCTCAAAACTATTTCATGATA +
Preference number: 6 (lower is better)
Translates to: VICRRVVVPGTL*EGTGAQNYFMI
Trigger: TATCATGAAATAGTTTTGAGCCCCTGTGCCCTCTCAAAGTGTCCCAGGGACCACTACACGTCTACAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619533.1
CDS TCA 72 bp AAGTTTTCCATCACTCAGAAAGAGGAGGATACCCCCTaGAATCAGCTGAAGTTCACTGAACAGCAGAAGCCC +
Preference number: 6 (lower is better)
Translates to: KFSITQKEEDTP*NQLKFTEQQKP
Trigger: GGGCTTCTGCTGTTCAGTGAACTTCAGCTGATTTCAGGGGGTATCCTCCTCTTTCTGAGTGATGGAAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS TCA 72 bp AAGGTCACTGAAGTTCCCAAGGGACCCCTGCTGAACTaGAATCAGATCTACCACTTTGCCGCTGATAGAAAT +
Preference number: 6 (lower is better)
Translates to: KVTEVPKGPLLN*NQIYHFAADRN
Trigger: ATTTCTATCAGCGGCAAAGTGGTAGATCTGATTTCAGTTCAGCAGGGGTCCCTTGGGAACTTCAGTGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS GCA 72 bp CATTTGAGCAGAATGGCCCTGTGTATGCAGAGAAAGTaGAGTCACAAAAGAACCCAATGGGTCTTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: HLSRMALCMQRK*SHKRTQWVFLC
Trigger: GCAGAGAAAGACCCATTGGGTTCTTTTGTGACTGCACTTTCTCTGCATACACAGGGCCATTCTGCTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS TCA 72 bp AAAAAGAGTCTTGCTCTTCTTAATTGCAGTGTGATGTaGTCTCCATTTGGCCCTTCCCTGTGGAGTAGAATC +
Preference number: 6 (lower is better)
Translates to: KKSLALLNCSVM*SPFGPSLWSRI
Trigger: GATTCTACTCCACAGGGAAGGGCCAAATGGAGATCACATCACACTGCAATTAAGAAGAGCAAGACTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS GCA 72 bp TATCAGACCTCCAATTACTGCAGAGTCACTTTTGATTaGATTAGCAAGGGGCTCTCTGTCATCTATTGTTCC +
Preference number: 6 (lower is better)
Translates to: YQTSNYCRVTFD*ISKGLSVIYCS
Trigger: GGAACAATAGATGACAGAGAGCCCCTTGCTAATGCAATCAAAAGTGACTCTGCAGTAATTGGAGGTCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CAA 72 bp GGATTAGTATTTCTGACTCTTGTTAAGTCAGAGCCGTaGTGCTGTATGATGGTCCATGCAGTTTCGGTCATA +
Preference number: 6 (lower is better)
Translates to: GLVFLTLVKSEP*CCMMVHAVSVI
Trigger: TATGACCGAAACTGCATGGACCATCATACAGCACAACGGCTCTGACTTAACAAGAGTCAGAAATACTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CAA 72 bp ACAGCTATCAGACCTCCAATTACTGCAGAGTCACTTTaGATTGCATTAGCAAGGGGCTCTCTGTCATCTATT +
Preference number: 6 (lower is better)
Translates to: TAIRPPITAESL*IALARGSLSSI
Trigger: AATAGATGACAGAGAGCCCCTTGCTAATGCAATCAAAAGTGACTCTGCAGTAATTGGAGGTCTGATAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CAA 90 bp GGGTTCTCTGGATTAGTATTTCTGACTCTTGTTAAGTCAGAGCCGTaGTGCTGTATGATGGTCCATGCAGTTTCGGTCATATTGCAATAT +
Preference number: 6 (lower is better)
Translates to: GFSGLVFLTLVKSEP*CCMMVHAVSVILQY
Trigger: ATATTGCAATATGACCGAAACTGCATGGACCATCATACAGCACAACGGCTCTGACTTAACAAGAGTCAGAAATACTAATCCAGAGAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS GCA 72 bp TTAGTATTTCTGACTCTTGTTAAGTCAGAGCCGTTGTaGTGTATGATGGTCCATGCAGTTTCGGTCATATTG +
Preference number: 6 (lower is better)
Translates to: LVFLTLVKSEPL*CMMVHAVSVIL
Trigger: CAATATGACCGAAACTGCATGGACCATCATACAGCACAACGGCTCTGACTTAACAAGAGTCAGAAATACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000471618.5
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS CAA 90 bp AAAATCACAACAGCTATCAGACCTCCAATTACTGCAGAGTCACTTTaGATTGCATTAGCAAGGGGCTCTCTGTCATCTATTGTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: KITTAIRPPITAESL*IALARGSLSSIVPE
Trigger: TTCTGGAACAATAGATGACAGAGAGCCCCTTGCTAATGCAATCAAAAGTGACTCTGCAGTAATTGGAGGTCTGATAGCTGTTGTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307431.12
ENST00000377504.8
ENST00000476707.1
ENST00000478060.5
ENST00000611870.5
ENST00000622250.4
CDS GCA 72 bp GTGTTAAAATGGGAAACAGAAATAAAGTACTTCTGGTaGACTCTGAAGTCTGATCATTGTCTCCAGGAAAAG +
Preference number: 6 (lower is better)
Translates to: VLKWETEIKYFW*TLKSDHCLQEK
Trigger: CTTTTCCTGGAGACAATGATCAGACTTCAGAGTGCACCAGAAGTACTTTATTTCTGTTTCCCATTTTAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619533.1