Pregenerated sensors for CNTNAP3B (Homo sapiens)
Ensembl gene IDs: ENSG00000154529Ensembl transcript IDs: ENST00000276974.7, ENST00000377561.7, ENST00000612828.4
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCACTTGCGACAGCATGGATGGAACTGGAGGTCATTATGTTAAGTaGAATAGGCCAGGCATAGAAAGACAAACATTGCCATGTTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: VTCDSMDGTGGHYVK*NRPGIERQTLPCSH Trigger: ATGAGAACATGGCAATGTTTGTCTTTCTATGCCTGGCCTATTTCACTTAACATAATGACCTCCAGTTCCATCCATGCTGTCGCAAGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612828.4 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCTTAAAATCCAGATACAGACCATTTAAAATCCCGATCTCTGGAGGTGGAGGTAAAGGTATCTTTTaGATCTCCTCTGGTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GLLKSRYRPFKIPISGGGGKGIF*ISSGDS Trigger: GGAGTCACCAGAGGAGATTCAAAAGATACCTTTACC...TCCACCTCCAGAGATCGGGATTTTAAATGGTCTGTATCTGGATTTTAAGAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276974.7 |
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| 3UTR TCA 72 bp | ATACAAAATGGAGTACTCTTCAGCCATAAAAGAGAATaGGATCCTGTCACTTGCGACAGCATGGATGGAACT | + |
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Preference number: 3 (lower is better) Translates to: IQNGVLFSHKRE*DPVTCDSMDGT Trigger: AGTTCCATCCATGCTGTCGCAAGTGACAGGATCTCATTCTCTTTTATGGCTGAAGAGTACTCCATTTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612828.4 |
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| CDS-3UTR TCA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCATGGGGTTCCATCTCGTaGGTCCGGGCGCCGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: MMCLFHSACLYQNISCTPWGSIS*VRAPRC Trigger: ACAGCGCGGCGCCCGGACTCACGAGATGGAACCCCA...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CCA 90 bp | GGGCTCTTAAAATCCAGATACAGACCATTTAAAATCCCGATCTCTGGAGGTGGAGGAATCACAGTCAGGTaGATTTCCTGCTCCTACGGG | + |
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Preference number: 4 (lower is better) Translates to: GLLKSRYRPFKIPISGGGGITVR*ISCSYG Trigger: CCCGTAGGAGCAGGAAATCCACCTGACTGTGATTCC...TCCACCTCCAGAGATCGGGATTTTAAATGGTCTGTATCTGGATTTTAAGAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276974.7 |
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| CDS-3UTR CCA 90 bp | GGGCTCTTAAAATCCAGATACAGACCATTTAAAATCCCGATCTCTGGAGGTGGACCCGATCTCTGGAGGTaGAGCCAGGTAAAGGTATCT | + |
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Preference number: 4 (lower is better) Translates to: GLLKSRYRPFKIPISGGGPDLWR*SQVKVS Trigger: AGATACCTTTACCTGGCTCCACCTCCAGAGATCGGG...TCCACCTCCAGAGATCGGGATTTTAAATGGTCTGTATCTGGATTTTAAGAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276974.7 |
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| CDS-3UTR CCA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCAGGAATCACAGTCAGGTaGATTTCCTGCTCCTACGGG | + |
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Preference number: 4 (lower is better) Translates to: MMCLFHSACLYQNISCTPGITVR*ISCSYG Trigger: CCCGTAGGAGCAGGAAATCCACCTGACTGTGATTCC...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR TCA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCAAAAGTAGTAGACAGCTaGGATAATGGTGGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: MMCLFHSACLYQNISCTPKVVDS*DNGGAE Trigger: CTCTGCCCCACCATTATCTCAGCTGTCTACTACTTT...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTAAAAATGTCACTTCTGTaGGAGCCCGCAGCTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVKMSLL*EPAAQS Trigger: GGATTGAGCTGCGGGCTCCCACAGAAGTGACATTTT...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR TCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTAAAAGTAGTAGACAGCTaGGATAATGGTGGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVKVVDS*DNGGAE Trigger: CTCTGCCCCACCATTATCTCAGCTGTCTACTACTTT...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CCA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCATGTTTCTTTGCGCTCTaGTTAACCTCTACCATGACC | + |
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Preference number: 4 (lower is better) Translates to: MMCLFHSACLYQNISCTPCFFAL*LTSTMT Trigger: GGTCATGGTAGAGGTTAACCAGAGCGCAAAGAAACA...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR GCA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCACCATTCTCCATGATGTaGTTATTTCACAGTGCATGC | + |
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Preference number: 4 (lower is better) Translates to: MMCLFHSACLYQNISCTPPFSMM*LFHSAC Trigger: GCATGCACTGTGAAATAAGCACATCATGGAGAATGG...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTAATGCGGAAATCTCATTaGAGCAGAACGGTCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVMRKSH*SRTVHH Trigger: ATGATGGACCGTTCTGCTCCAATGAGATTTCCGCAT...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377561.7 |
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| CDS-3UTR CCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTATGTTTCTTTGCGCTCTaGTTAACCTCTACCATGACC | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVCFFAL*LTSTMT Trigger: GGTCATGGTAGAGGTTAACCAGAGCGCAAAGAAACA...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTATTGCGACAGCATGGATaGAACTGGAGGTCATTATGT | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVLRQHG*NWRSLC Trigger: ACATAATGACCTCCAGTTCCATCCATGCTGTCGCAA...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612828.4 |
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| CDS-3UTR TCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTAACAAAGGATAAATGTTaGGGGGATGGATACCCCATT | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVTKDKC*GDGYPI Trigger: AATGGGGTATCCATCCCCTCAACATTTATCCTTTGT...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR GCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTACCATTCTCCATGATGTaGTTATTTCACAGTGCATGC | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVPFSMM*LFHSAC Trigger: GCATGCACTGTGAAATAAGCACATCATGGAGAATGG...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR TCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTAGGTCATTATGTTAAGTaGAATAGGCCAGGCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVGHYVK*NRPGIE Trigger: TTCTATGCCTGGCCTATTTCACTTAACATAATGACC...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612828.4 |
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| CDS-3UTR TCA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCAGTGTTCATCAACAGATaGATGAAGAAAATGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: MMCLFHSACLYQNISCTPVFINR*MKKMWF Trigger: GAACCACATTTTCTTCATTCATCTGTTGATGAACAC...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612828.4 |
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| CDS-3UTR GCA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTAGTGCTTATTTCACAGTaGATGCCTGTATCAAAACAT | + |
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Preference number: 4 (lower is better) Translates to: VHACIKTFHVLHKYMHLVVLISQ*MPVSKH Trigger: ATGTTTTGATACAGGCATGCACTGTGAAATAAGCAC...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CCA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCAATAACAGCTAAGATTTaGAAACACCCTAAGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: MMCLFHSACLYQNISCTPITAKI*KHPKCS Trigger: TGAACACTTAGGGTGTTTCCAAATCTTAGCTGTTAT...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612828.4 |
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| CDS-3UTR CAA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTATATGCGGAAATCTCATaGGAGCAGAACGGTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: VHACIKTFHVLHKYMHLVYAEIS*EQNGPS Trigger: TGATGGACCGTTCTGCTCCAATGAGATTTCCGCATA...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377561.7 |
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| CDS-3UTR CAA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCAATCTGCAAACTTCCATaGTTGGCGAGGATAACTGAA | + |
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Preference number: 5 (lower is better) Translates to: MMCLFHSACLYQNISCTPICKLP*LARITE Trigger: TTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGAT...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CAA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTAATCTGCAAACTTCCATaGTTGGCGAGGATAACTGAA | + |
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Preference number: 5 (lower is better) Translates to: VHACIKTFHVLHKYMHLVICKLP*LARITE Trigger: TTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGAT...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CAA 90 bp | ATGATGTGCTTATTTCACAGTGCATGCCTGTATCAAAACATTTCATGTACTCCACAGAGTGTAATCAGGTaGTTTGTAACACAAAGGATA | + |
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Preference number: 5 (lower is better) Translates to: MMCLFHSACLYQNISCTPQSVIR*FVTQRI Trigger: TATCCTTTGTGTTACAAACAACCTGATTACACTCTG...TGGAGTACATGAAATGTTTTGATACAGGCATGCACTGTGAAATAAGCACATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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| CDS-3UTR CAA 90 bp | GTGCATGCCTGTATCAAAACATTTCATGTACTCCATAAATATATGCACCTAGTACAGAGTGTAATCAGGTaGTTTGTAACACAAAGGATA | + |
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Preference number: 5 (lower is better) Translates to: VHACIKTFHVLHKYMHLVQSVIR*FVTQRI Trigger: TATCCTTTGTGTTACAAACAACCTGATTACACTCTG...TACTAGGTGCATATATTTATGGAGTACATGAAATGTTTTGATACAGGCATGCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377561.7 ENST00000612828.4 |
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