RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTNAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000174469

Ensembl transcript IDs: ENST00000361727.8, ENST00000455301.2, ENST00000463592.3, ENST00000602734.4, ENST00000613345.2, ENST00000625365.2, ENST00000627772.2, ENST00000628930.2, ENST00000631199.2, ENST00000632946.1, ENST00000633326.1, ENST00000633544.1, ENST00000633607.1, ENST00000636242.1, ENST00000636399.1, ENST00000636561.1, ENST00000636870.1, ENST00000636988.1, ENST00000637020.1, ENST00000637150.1, ENST00000637555.1, ENST00000637694.1, ENST00000637825.1, ENST00000638117.1

Found 1145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTTCAAGTCCCACAGCTGTGTGCTTGTTCCTGAAGTGCTTCCAATaGCTTCGCCTGTGCCCAGCTCTCAGCCTGCATATGGTGGCCGCT +
Preference number: 1 (lower is better)
Translates to: CSSPTAVCLFLKCFQ*LRLCPALSLHMVAA
Trigger: AGCGGCCACCATATGCAGGCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACACAGCTGTGGGACTTGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 90 bp ACAGCTGTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTaGCCAGCTCTCAGCCTGCATATGGTGGCCGCTCAGCAGATTTTC +
Preference number: 1 (lower is better)
Translates to: TAVCLFLKCFQWLRL*PALSLHMVAAQQIF
Trigger: GAAAATCTGCTGAGCGGCCACCATATGCAGGCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACACAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 90 bp CCTCTCTCCAGTTGTGCTGATTGTGTCGTTACACACCAGGTGCCATaGACTCTCTTCCTTCAACTGCTGGTATCAGTCAGGAACCCCAGA +
Preference number: 1 (lower is better)
Translates to: PLSSCADCVVTHQVP*TLFLQLLVSVRNPR
Trigger: TCTGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGACACAATCAGCACAACTGGAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CCA 90 bp AAGCGGGGCGGGGGTAGGAGCCATTGGTTCTTAGCTGAAGTCAGCTaGGGACATTGTTACTGTTTGTTTCGCACTGGTTTAGGATCAGGT +
Preference number: 1 (lower is better)
Translates to: KRGGGRSHWFLAEVS*GHCYCLFRTGLGSG
Trigger: ACCTGATCCTAAACCAGTGCGAAACAAACAGTAACAATGTCCCCAGCTGACTTCAGCTAAGAACCAATGGCTCCTACCCCCGCCCCGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR TCA 90 bp CTGGTATCAGTCAGGAACCCCAGATGCCAGAGAGCTGGCATAGATTaGGCTCTGCTTAAAAACTGGCAAATAATAGGTTCTCTTTGCCCC +
Preference number: 1 (lower is better)
Translates to: LVSVRNPRCQRAGID*ALLKNWQIIGSLCP
Trigger: GGGGCAAAGAGAACCTATTATTTGCCAGTTTTTAAGCAGAGCTCAATCTATGCCAGCTCTCTGGCATCTGGGGTTCCTGACTGATACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 90 bp GAGAGGAACTTCCATATTTTCACAGCCATCTCCGAAAGCAGCAGTTaGTGTAAATTAACTGAGACTTGGAAATGGTGCAGACTGTCTTGG +
Preference number: 1 (lower is better)
Translates to: ERNFHIFTAISESSS*CKLTETWKWCRLSW
Trigger: CCAAGACAGTCTGCACCATTTCCAAGTCTCAGTTAATTTACAGCAACTGCTGCTTTCGGAGATGGCTGTGAAAATATGGAAGTTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR TCA 90 bp AACAGATTCCATCATAGAAGGAAAGAAAAGCTTCTTGACACAACCTaGACACTTGCATGTTCAAGTCCCACAGCTGTGTGCTTGTTCCTG +
Preference number: 1 (lower is better)
Translates to: NRFHHRRKEKLLDTT*TLACSSPTAVCLFL
Trigger: CAGGAACAAGCACACAGCTGTGGGACTTGAACATGCAAGTGTTCAGGTTGTGTCAAGAAGCTTTTCTTTCCTTCTATGATGGAATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CCA 90 bp TGGGAATTAACTGGTCCAATGTCTCCTTTGGAATGTGCTCTGTACTaGTGTAATGTGCCACTGGCAACTCTAGGTAATGTTTTCCATTAC +
Preference number: 1 (lower is better)
Translates to: WELTGPMSPLECALY*CNVPLATLGNVFHY
Trigger: GTAATGGAAAACATTACCTAGAGTTGCCAGTGGCACATTACACCAGTACAGAGCACATTCCAAAGGAGACATTGGACCAGTTAATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR TCA 90 bp AGAATATTCCATTATATTCCATTGCCTGCCTCCCCCAACTTGTGCTaGTATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTT +
Preference number: 1 (lower is better)
Translates to: RIFHYIPLPASPNLC*YFKDVLKSMKQGAF
Trigger: AAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATATCAGCACAAGTTGGGGGAGGCAGGCAATGGAATATAATGGAATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
3UTR GCA 90 bp ATACATGTGTGCCCATATTTATTTTTATTATCTCCTGCCAGTCTTTaGTCAATGGGAGATGACAGACCAACTTCTCAACGTGATTTCCCC +
Preference number: 1 (lower is better)
Translates to: IHVCPYLFLLSPASL*SMGDDRPTSQRDFP
Trigger: GGGGAAATCACGTTGAGAAGTTGGTCTGTCATCTCCCATTGAGCAAAGACTGGCAGGAGATAATAAAAATAAATATGGGCACACATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CCA 90 bp TGTGCCCATATTTATTTTTATTATCTCCTGCCAGTCTTTGCTCAATaGGAGATGACAGACCAACTTCTCAACGTGATTTCCCCATTTCAT +
Preference number: 1 (lower is better)
Translates to: CAHIYFYYLLPVFAQ*EMTDQLLNVISPFH
Trigger: ATGAAATGGGGAAATCACGTTGAGAAGTTGGTCTGTCATCTCCCATTGAGCAAAGACTGGCAGGAGATAATAAAAATAAATATGGGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGCCCAGCTCTCAGCCTaGATATGGTGGCCGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATAQLSA*IWWPLS
Trigger: GCTGAGCGGCCACCATATGCAGGCTGAGAGCTGGGC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACCGAGATTGCGCCAGTaGACTCCAGCCTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATPRLRQ*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCACTGGCGCAATCTCGG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCAGCAGGATTAGGCACTaGGAGCTTGGGCGGGAATGT +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSRIRH*ELGREC
Trigger: ACATTCCCGCCCAAGCTCTCAGTGCCTAATCCTGCT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAGCTACTTGGGAGGCTaGGGCAGGAGAATCGCCTCA +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATSYLGG*GRRIAS
Trigger: TGAGGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGGTGGACGGATCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATGGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCCGTCCACC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCACTTCTCCATCCTCTaGGAAGCAACAGGTACCAGG +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSHFSIL*EATGTR
Trigger: CCTGGTACCTGTTGCTTCCCAGAGGATGGAGAAGTG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAGCAGGATTAGGCACTaGGAGCTTGGGCGGGAATGT +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATSRIRH*ELGREC
Trigger: ACATTCCCGCCCAAGCTCTCAGTGCCTAATCCTGCT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCGTTACACACCAGGTaGCATGCACTCTCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSLHTR*HALSSF
Trigger: GAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGAGTATGAAGCAGGGTaGTTTTGTCCCTTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSEYEAG*FCPFLS
Trigger: GGAGAGAAAGGGACAAAAGCACCCTGCTTCATACTC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGTCAGGAACCCCAGATaGCAGAGAGCTGGCATAGAT +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATVRNPR*QRAGID
Trigger: ATCTATGCCAGCTCTCTGGCATCTGGGGTTCCTGAC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCTCTCTTCCTTCAACTaGTGGTATCAGTCAGGAACC +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLSSFN*WYQSGT
Trigger: GGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCAGAACCACTGATCCCTaGAGTCATTCCAGTGTCCTA +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSRTTDP*SHSSVL
Trigger: TAGGACACTGGAATGACTGCAGGGATCAGTGGTTCT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCAAAGGAAGAGAATGTTaGGGGCCATCTGTAGGTGCA +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSKGREC*GPSVGA
Trigger: TGCACCTACAGATGGCCCCCAACATTCTCTTCCTTT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATGGGCGGGAATGTCATaGTTATGGAGGCTGCACTGT +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATWAGMS*LWRLHC
Trigger: ACAGTGCAGCCTCCATAACCATGACATTCCCGCCCA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAGAATCGCCTCAATGTaGGAGGAGGAGGAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATRIASM*EEEEVA
Trigger: TGCAACCTCCTCCTCCTCCCACATTGAGGCGATTCT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCCCCCAACTTGTGCTaGTATTTTAAGGATGTGCTC +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSPNLC*YFKDVL
Trigger: GAGCACATCCTTAAAATATCAGCACAAGTTGGGGGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTGTGTGCTTGTTCCTaGAGTGCTTCCAATGGCTTC +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLCACS*SASNGF
Trigger: GAAGCCATTGGAAGCACTTCAGGAACAAGCACACAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATCGTTACACACCAGGTaGCATGCACTCTCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATSLHTR*HALSSF
Trigger: GAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCACAGCAGTGTGATTaGATGGAAAAACACGTGGAG +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSQQCD*MEKHVE
Trigger: CTCCACGTGTTTTTCCATCCAATCACACTGCTGTGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAATGTGCTCAAGAGTATaGAGCAGGGTGCTTTTGTCC +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATMCSRV*SRVLLS
Trigger: GGACAAAAGCACCCTGCTTCATACTCTTGAGCACAT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGAGTATGAAGCAGGGTaGTTTTGTCCCTTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATEYEAG*FCPFLS
Trigger: GGAGAGAAAGGGACAAAAGCACCCTGCTTCATACTC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATTATATTCCATTGCCTaGCTCCCCCAACTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLYSIA*LPQLVL
Trigger: CAGCACAAGTTGGGGGAGGCAGGCAATGGAATATAA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTCTCTTCCTTCAACTaGTGGTATCAGTCAGGAACC +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLSSFN*WYQSGT
Trigger: GGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCAAACTACCTTCCCTaGTTCTTTAATGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSNYLP*FFNASL
Trigger: GAGAGAGGCATTAAAGAACCAGGGAAGGTAGTTTGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCATCTTTTGTAACAGCTaGTCACCATGGTATTGCAGC +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSIFCNS*SPWYCS
Trigger: GCTGCAATACCATGGTGACCAGCTGTTACAAAAGAT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGCTCTAATTCCCCATTaGGGCGCTTATACATATATA +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSALIPH*GAYTYI
Trigger: TATATATGTATAAGCGCCTCAATGGGGAATTAGAGC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTGCTTGTTTGTCAAATaGAGGGCAGTAGGACATTTT +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSCLFVK*RAVGHF
Trigger: AAAATGTCCTACTGCCCTGCATTTGACAAACAAGCA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGAGAGAGAAAGGGGATaGTGTCAGCTAATTCTCATG +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATERERG*CQLILM
Trigger: CATGAGAATTAGCTGACAGCATCCCCTTTCTCTCTC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACAGATGCCAGAGAGCTaGCATAGATTGAGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSQMPES*HRLSSA
Trigger: AGCAGAGCTCAATCTATGCCAGCTCTCTGGCATCTG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTGTATGGGAATTAACTaGTCCAATGTCTCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSCMGIN*SNVSFG
Trigger: TCCAAAGGAGACATTGGACCAGTTAATTCCCATACA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAATGTGCTCAAGAGTATaGAGCAGGGTGCTTTTGTCC +
Preference number: 2 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSMCSRV*SRVLLS
Trigger: GGACAAAAGCACCCTGCTTCATACTCTTGAGCACAT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGTTTGAAATTTTGGTaGGAGGATTGGATCTCATTT +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGLKFW*EDWISF
Trigger: AAATGAGATCCAATCCTCTCACCAAAATTTCAAACC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGATGTCAAGATTTTGTaGGATGTGAATGACAAAGCA +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSDVKIL*DVNDKA
Trigger: TGCTTTGTCATTCACATCTCACAAAATCTTGACATC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCTACCAGCATACTTGTaGTTGCTTGATAATGTATTG +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLPAYL*LLDNVL
Trigger: CAATACATTATCAAGCAAGCACAAGTATGCTGGTAG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCTTGTTAGTAAAGGATaGTTGTTTGTCAAATGCAGG +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLVSKG*LFVKCR
Trigger: CCTGCATTTGACAAACAAGCATCCTTTACTAACAAG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTGAATTCCTCAGAATaGTGGGATCTCAAGACTTTT +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLNSSE*WDLKTF
Trigger: AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATTAGCTGAAGTCAGCTaGGGACATTGTTACTGTTTG +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLAEVS*GHCYCL
Trigger: CAAACAGTAACAATGTCCCCAGCTGACTTCAGCTAA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CAA 90 bp AGCCATTGGTTCTTAGCTGAAGTCAGCTGGGGACATTGTTACTGTTaGTTTCGCACTGGTTTAGGATCAGGTGGTTCTACTGGGACTAGC +
Preference number: 2 (lower is better)
Translates to: SHWFLAEVSWGHCYC*FRTGLGSGGSTGTS
Trigger: GCTAGTCCCAGTAGAACCACCTGATCCTAAACCAGTGCGAAACAAACAGTAACAATGTCCCCAGCTGACTTCAGCTAAGAACCAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGCCACCAACTTTCCCTaGAACTTTAAAACAGTCTAT +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATATNFP*NFKTVY
Trigger: ATAGACTGTTTTAAAGTTTCAGGGAAAGTTGGTGGC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATCCATTATATTCCATTaGCTGCCTCCCCCAACTTGT +
Preference number: 2 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSSIIFH*LPPPTC
Trigger: ACAAGTTGGGGGAGGCAGGCAATGGAATATAATGGA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCAGCATACTTGTGCTTaGTTGATAATGTATTGGAAT +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSQHTCA*LIMYWN
Trigger: ATTCCAATACATTATCAAGCAAGCACAAGTATGCTG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGCTCTGCTTAAAAACTaGCAAATAATAGGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSALLKN*QIIGSL
Trigger: AAGAGAACCTATTATTTGCCAGTTTTTAAGCAGAGC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCAGATGCCAGAGAGCTaGCATAGATTGAGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLQMPES*HRLSSA
Trigger: AGCAGAGCTCAATCTATGCCAGCTCTCTGGCATCTG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAACACGTGGAGTAGTTaGTTTAAAATATGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATNTWSS*FKIWQC
Trigger: ACACTGCCATATTTTAAATCAACTACTCCACGTGTT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGTCCATGACAGTGCCTaGGCTCAACCAGCAATGGTA +
Preference number: 2 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHVHDSA*AQPAMV
Trigger: TACCATTGCTGGTTGAGCTCAGGCACTGTCATGGAC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTCTTCCTTCAACTGCTaGTATCAGTCAGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLSSFNC*YQSGTP
Trigger: TGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTAGAGCTGGCATAGATTaGGCTCTGCTTAAAAACTGG +
Preference number: 2 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLRAGID*ALLKNW
Trigger: CCAGTTTTTAAGCAGAGCTCAATCTATGCCAGCTCT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGACACACCAGGTGCCATaGACTCTCTTCCTTCAACTG +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQTHQVP*TLFLQL
Trigger: CAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACACACACCAGGTGCCATaGACTCTCTTCCTTCAACTG +
Preference number: 2 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHTHQVP*TLFLQL
Trigger: CAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTCGTTACACACCAGGTaGCATGCACTCTCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSLHTR*HALSSF
Trigger: GAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACAGCATACTTGTGCTTaGTTGATAATGTATTGGAAT +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATQHTCA*LIMYWN
Trigger: ATTCCAATACATTATCAAGCAAGCACAAGTATGCTG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACAAAACATCGACATTTaGTTCATACACAGAAGATGT +
Preference number: 2 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATQNIDI*FIHRRC
Trigger: ACATCTTCTGTGTATGAAGCAAATGTCGATGTTTTG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGATGTGCTCAAGAGTATaGAGCAGGGTGCTTTTGTCC +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQMCSRV*SRVLLS
Trigger: GGACAAAAGCACCCTGCTTCATACTCTTGAGCACAT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTTATATTCCATTGCCTaGCTCCCCCAACTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQLYSIA*LPQLVL
Trigger: CAGCACAAGTTGGGGGAGGCAGGCAATGGAATATAA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAATAATAGGTTCTCTTTaGCCCTTTCTTTTCCGACTT +
Preference number: 2 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSIIGSL*PFLFRL
Trigger: AAGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTAT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCTCTCTTCCTTCAACTaGTGGTATCAGTCAGGAACC +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQLSSFN*WYQSGT
Trigger: GGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGAAAGGAAGAGAATGTTaGGGGCCATCTGTAGGTGCA +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQKGREC*GPSVGA
Trigger: TGCACCTACAGATGGCCCCCAACATTCTCTTCCTTT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTCTTCCTTCAACTGCTaGTATCAGTCAGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQSSFNC*YQSGTP
Trigger: TGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTCCATTATATTCCATTaGCTGCCTCCCCCAACTTGT +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQSIIFH*LPPPTC
Trigger: ACAAGTTGGGGGAGGCAGGCAATGGAATATAATGGA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGGGGCCATCTGTAGGTaGATTAGCTTTTCTCAAGAA +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQGAICR*ISFSQE
Trigger: TTCTTGAGAAAAGCTAATGCACCTACAGATGGCCCC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAACACACCAGGTGCCATaGACTCTCTTCCTTCAACTG +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRTHQVP*TLFLQL
Trigger: CAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACATGGTTATGGAGGCTaGACTGTGCTAGGCTATCCA +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRHGYGG*TVLGYP
Trigger: TGGATAGCCTAGCACAGTGCAGCCTCCATAACCATG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTCACAGCAGTGTGATTaGATGGAAAAACACGTGGAG +
Preference number: 2 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSQQCD*MEKHVE
Trigger: CTCCACGTGTTTTTCCATCCAATCACACTGCTGTGA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGTCCAATGTCTCCTTTaGAATGTGCTCTGTACTGGT +
Preference number: 2 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHVQCLL*NVLCTG
Trigger: ACCAGTACAGAGCACATTCCAAAGGAGACATTGGAC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCTCTCCAGTTGTGCTaGTTGTGTCGTTACACACCA +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSLQLC*LCRYTP
Trigger: TGGTGTGTAACGACACAATCAGCACAACTGGAGAGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGTCAGGAACCCCAGATaGCAGAGAGCTGGCATAGAT +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFVRNPR*QRAGID
Trigger: ATCTATGCCAGCTCTCTGGCATCTGGGGTTCCTGAC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACTCTCTTCCTTCAACTaGTGGTATCAGTCAGGAACC +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLSSFN*WYQSGT
Trigger: GGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAAGAACCACTGATCCCTaGAGTCATTCCAGTGTCCTA +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRRTTDP*SHSSVL
Trigger: TAGGACACTGGAATGACTGCAGGGATCAGTGGTTCT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTCAAACTACCTTCCCTaGTTCTTTAATGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSNYLP*FFNASL
Trigger: GAGAGAGGCATTAAAGAACCAGGGAAGGTAGTTTGA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGATCTTTTGTAACAGCTaGTCACCATGGTATTGCAGC +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQIFCNS*SPWYCS
Trigger: GCTGCAATACCATGGTGACCAGCTGTTACAAAAGAT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCACTTCTCCATCCTCTaGGAAGCAACAGGTACCAGG +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFHFSIL*EATGTR
Trigger: CCTGGTACCTGTTGCTTCCCAGAGGATGGAGAAGTG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCACTTCTCCATCCTCTaGGAAGCAACAGGTACCAGG +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSHFSIL*EATGTR
Trigger: CCTGGTACCTGTTGCTTCCCAGAGGATGGAGAAGTG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGAATGTGCTCTGTACTaGTGTAATGTGCCACTGGCA +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRECALY*CNVPLA
Trigger: TGCCAGTGGCACATTACACCAGTACAGAGCACATTC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAAGAGCTGGCATAGATTaGGCTCTGCTTAAAAACTGG +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRRAGID*ALLKNW
Trigger: CCAGTTTTTAAGCAGAGCTCAATCTATGCCAGCTCT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGCTCTAATTCCCCATTaGGGCGCTTATACATATATA +
Preference number: 2 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQALIPH*GAYTYI
Trigger: TATATATGTATAAGCGCCTCAATGGGGAATTAGAGC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCCATTATATTCCATTaGCTGCCTCCCCCAACTTGT +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSIIFH*LPPPTC
Trigger: ACAAGTTGGGGGAGGCAGGCAATGGAATATAATGGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTCGTTACACACCAGGTaGCATGCACTCTCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSSLHTR*HALSSF
Trigger: GAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCAGATGCCAGAGAGCTaGCATAGATTGAGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFQMPES*HRLSSA
Trigger: AGCAGAGCTCAATCTATGCCAGCTCTCTGGCATCTG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCACAGCAGTGTGATTaGATGGAAAAACACGTGGAG +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSQQCD*MEKHVE
Trigger: CTCCACGTGTTTTTCCATCCAATCACACTGCTGTGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTATGTGCTCAAGAGTATaGAGCAGGGTGCTTTTGTCC +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFMCSRV*SRVLLS
Trigger: GGACAAAAGCACCCTGCTTCATACTCTTGAGCACAT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAACACGTGGAGTAGTTaGTTTAAAATATGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHNTWSS*FKIWQC
Trigger: ACACTGCCATATTTTAAATCAACTACTCCACGTGTT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGAGTATGAAGCAGGGTaGTTTTGTCCCTTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSEYEAG*FCPFLS
Trigger: GGAGAGAAAGGGACAAAAGCACCCTGCTTCATACTC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACATAATAGGTTCTCTTTaGCCCTTTCTTTTCCGACTT +
Preference number: 2 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHIIGSL*PFLFRL
Trigger: AAGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTAT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACCCAAGAAACTGATGTaGTCCAATAAGTTAGGCACA +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRPKKLM*SNKLGT
Trigger: TGTGCCTAACTTATTGGAGCACATCAGTTTCTTGGG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTAAAGGAAGAGAATGTTaGGGGCCATCTGTAGGTGCA +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFKGREC*GPSVGA
Trigger: TGCACCTACAGATGGCCCCCAACATTCTCTTCCTTT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTAAAGGAAGAGAATGTTaGGGGCCATCTGTAGGTGCA +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSKGREC*GPSVGA
Trigger: TGCACCTACAGATGGCCCCCAACATTCTCTTCCTTT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTCTTCCTTCAACTGCTaGTATCAGTCAGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSSSFNC*YQSGTP
Trigger: TGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCAAACTACCTTCCCTaGTTCTTTAATGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSNYLP*FFNASL
Trigger: GAGAGAGGCATTAAAGAACCAGGGAAGGTAGTTTGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGAATGTGCTCTGTACTaGTGTAATGTGCCACTGGCA +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSECALY*CNVPLA
Trigger: TGCCAGTGGCACATTACACCAGTACAGAGCACATTC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTAGAGCTGGCATAGATTaGGCTCTGCTTAAAAACTGG +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFRAGID*ALLKNW
Trigger: CCAGTTTTTAAGCAGAGCTCAATCTATGCCAGCTCT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTCCATTATATTCCATTaGCTGCCTCCCCCAACTTGT +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSSIIFH*LPPPTC
Trigger: ACAAGTTGGGGGAGGCAGGCAATGGAATATAATGGA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGGGGCCATCTGTAGGTaGATTAGCTTTTCTCAAGAA +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFGAICR*ISFSQE
Trigger: TTCTTGAGAAAAGCTAATGCACCTACAGATGGCCCC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGTCCAATGTCTCCTTTaGAATGTGCTCTGTACTGGT +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSVQCLL*NVLCTG
Trigger: ACCAGTACAGAGCACATTCCAAAGGAGACATTGGAC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAATAATAGGTTCTCTTTaGCCCTTTCTTTTCCGACTT +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRIIGSL*PFLFRL
Trigger: AAGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTAT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTATCTTTTGTAACAGCTaGTCACCATGGTATTGCAGC +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFIFCNS*SPWYCS
Trigger: GCTGCAATACCATGGTGACCAGCTGTTACAAAAGAT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTATCTTTTGTAACAGCTaGTCACCATGGTATTGCAGC +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSIFCNS*SPWYCS
Trigger: GCTGCAATACCATGGTGACCAGCTGTTACAAAAGAT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAAAAGTGTTGAGACAATaGATAAAGAACAGAGCTATC +
Preference number: 2 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRKVLRQ*IKNRAI
Trigger: GATAGCTCTGTTCTTTATGCATTGTCTCAACACTTT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTATAATAGGTTCTCTTTaGCCCTTTCTTTTCCGACTT +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSIIGSL*PFLFRL
Trigger: AAGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTAT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGATAGTTACAGCTATTaGTCTAAGACTACATACGTG +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSDSYSY*SKTTYV
Trigger: CACGTATGTAGTCTTAGACCAATAGCTGTAACTATC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGATAGTTACAGCTATTaGTCTAAGACTACATACGTG +
Preference number: 2 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFDSYSY*SKTTYV
Trigger: CACGTATGTAGTCTTAGACCAATAGCTGTAACTATC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTTGAATTCCTCAGAATaGTGGGATCTCAAGACTTTT +
Preference number: 2 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLNSSE*WDLKTF
Trigger: AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTAGGCACTGAGAGCTaGGGCGGGAATGTCATGGTT +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLGTES*GGNVMV
Trigger: AACCATGACATTCCCGCCCAAGCTCTCAGTGCCTAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CCA 72 bp CACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTaGTATCAGTCAGGAACCCCAGATGCCAGAGAGCTG +
Preference number: 3 (lower is better)
Translates to: HTRCHALSSFNC*YQSGTPDAREL
Trigger: CAGCTCTCTGGCATCTGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGTCCAATGTCTCCTTaGGAATGTGCTCTGTACTGG +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGPMSP*ECALYW
Trigger: CCAGTACAGAGCACATTCCAAAGGAGACATTGGACC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCCTGGACCAGCTTTCTaGAGCTCTAGGGAATATGCT +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSPGPAF*SSREYA
Trigger: AGCATATTCCCTAGAGCTCAAGAAAGCTGGTCCAGG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR TCA 72 bp TTGCATGTTCAAGTCCCACAGCTGTGTGCTTGTTCCTaGAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: LHVQVPQLCACS*SASNGFACAQL
Trigger: GAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACACAGCTGTGGGACTTGAACATGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTCCATTATATTCCATaGCCTGCCTCCCCCAACTTG +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSFHYIP*PASPNL
Trigger: CAAGTTGGGGGAGGCAGGCAATGGAATATAATGGAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACCCACAGCTGTGTGCTaGTTCCTGAAGTGCTTCCAA +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATPTAVC*FLKCFQ
Trigger: TTGGAAGCACTTCAGGAACAAGCACACAGCTGTGGG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 72 bp TTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTaGTGGTATCAGTCAGGAACCCCAGATGCCAGAGAG +
Preference number: 3 (lower is better)
Translates to: LHTRCHALSSFN*WYQSGTPDARE
Trigger: CTCTCTGGCATCTGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCACATTGTAACCCTCTaGAAGGAAGACAGTGTCCTA +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSHIVTL*KEDSVL
Trigger: TAGGACACTGTCTTCCTTCAAGAGGGTTACAATGTG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACCTGGACCAGCTTTCTaGAGCTCTAGGGAATATGCT +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATPGPAF*SSREYA
Trigger: AGCATATTCCCTAGAGCTCAAGAAAGCTGGTCCAGG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACAAAAGTTCGAGGACTaGACCAAGGTCACACAGGGA +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATQKFED*TKVTQG
Trigger: TCCCTGTGTGACCTTGGTCAAGTCCTCGAACTTTTG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGCTCTAATTCCCCATaGAGGCGCTTATACATATAT +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGSNSP*RRLYIY
Trigger: ATATATGTATAAGCGCCTCAATGGGGAATTAGAGCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGTAGCAGAAGCTGTTTaGGGTGGCTTTAATTCTCTA +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSVAEAV*GGFNSL
Trigger: TAGAGAATTAAAGCCACCCAAAACAGCTTCTGCTAC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAGTCAGCTGGGGACATaGTTACTGTTTGTTTCGCAC +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATSQLGT*LLFVSH
Trigger: GTGCGAAACAAACAGTAACAATGTCCCCAGCTGACT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAAAAACGTAGAAAACTaGCCCTGTTACCACGGGTCT +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATKNVEN*PCYHGS
Trigger: AGACCCGTGGTAACAGGGCAAGTTTTCTACGTTTTT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTCATTTTTCACCTTTaGTGGCAGGAAAAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLIFHL*WQEKER
Trigger: CCTCTCCTTTTCCTGCCACAAAAGGTGAAAAATGAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCCAGCATACTTGTGCTaGCTTGATAATGTATTGGAA +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSPAYLC*LDNVLE
Trigger: TTCCAATACATTATCAAGCAAGCACAAGTATGCTGG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCTACTACCAGCATACTaGTGCTTGCTTGATAATGTA +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLLPAY*CLLDNV
Trigger: TACATTATCAAGCAAGCACAAGTATGCTGGTAGTAG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCATTAAGACAGACTCTTaGGCTCATGCCAATGCTTTT +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSIKTDS*AHANAF
Trigger: AAAAGCATTGGCATGAGCCAAAGAGTCTGTCTTAAT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 72 bp AGTTGTGCTGATTGTGTCGTTACACACCAGGTGCCATaGACTCTCTTCCTTCAACTGCTGGTATCAGTCAGG +
Preference number: 3 (lower is better)
Translates to: SCADCVVTHQVP*TLFLQLLVSVR
Trigger: CCTGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGACACAATCAGCACAACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 72 bp TCTCCAGTTGTGCTGATTGTGTCGTTACACACCAGGTaGCATGCACTCTCTTCCTTCAACTGCTGGTATCAG +
Preference number: 3 (lower is better)
Translates to: SPVVLIVSLHTR*HALSSFNCWYQ
Trigger: CTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGACACAATCAGCACAACTGGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATTCCATTATATTCCATaGCCTGCCTCCCCCAACTTG +
Preference number: 3 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSFHYIP*PASPNL
Trigger: CAAGTTGGGGGAGGCAGGCAATGGAATATAATGGAA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAACAGCCCATTAAGGTaGACTAGAAGCAAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATNSPLR*TRSKRK
Trigger: CTTCCTTTTGCTTCTAGTCAACCTTAATGGGCTGTT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGGCTCTAATTCCCCATaGAGGCGCTTATACATATAT +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATGSNSP*RRLYIY
Trigger: ATATATGTATAAGCGCCTCAATGGGGAATTAGAGCC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGAAAAAGTGATCATATaGAATTCCTCAGAATGGTGG +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSEKVII*NSSEWW
Trigger: CCACCATTCTGAGGAATTCAATATGATCACTTTTTC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACATCAGGATTCCCTTTaGTTCTGTTACCTTGACTTG +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATHQDSL*FCYLDL
Trigger: CAAGTCAAGGTAACAGAACAAAAGGGAATCCTGATG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCAAAACATCGACATTaGCTTCATACACAGAAGATG +
Preference number: 3 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSKHRH*LHTQKM
Trigger: CATCTTCTGTGTATGAAGCAAATGTCGATGTTTTGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGGGTTTCAAGGTATTTaGCAGTCAAGAATCAATGGC +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATGFQGI*QSRING
Trigger: GCCATTGATTCTTGACTGCAAAATACCTTGAAACCC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CCA 72 bp GGGGGTAGGAGCCATTGGTTCTTAGCTGAAGTCAGCTaGGGACATTGTTACTGTTTGTTTCGCACTGGTTTA +
Preference number: 3 (lower is better)
Translates to: GGRSHWFLAEVS*GHCYCLFRTGL
Trigger: TAAACCAGTGCGAAACAAACAGTAACAATGTCCCCAGCTGACTTCAGCTAAGAACCAATGGCTCCTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTAAAAGGAAGAGAATGTaGGGGGCCATCTGTAGGTGC +
Preference number: 3 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLKRKRM*GAICRC
Trigger: GCACCTACAGATGGCCCCCAACATTCTCTTCCTTTT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACCAGCATACTTGTGCTaGCTTGATAATGTATTGGAA +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATPAYLC*LDNVLE
Trigger: TTCCAATACATTATCAAGCAAGCACAAGTATGCTGG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCTGGTCACCATGGTATaGCAGCTGATAGTTACAGCT +
Preference number: 3 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLLVTMV*QLIVTA
Trigger: AGCTGTAACTATCAGCTGCAATACCATGGTGACCAG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATATCCAAGGAGAGAGTaGGAAGAAAGACTTAATTCT +
Preference number: 3 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATYPRRE*EERLNS
Trigger: AGAATTAAGTCTTTCTTCCAACTCTCTCCTTGGATA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAATAATAGGTTCTCTTaGCCCCTTTCTTTTCCGACT +
Preference number: 3 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSNNRFS*PLSFPT
Trigger: AGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTATT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGGTCCAATGTCTCCTTaGGAATGTGCTCTGTACTGG +
Preference number: 3 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHGPMSP*ECALYW
Trigger: CCAGTACAGAGCACATTCCAAAGGAGACATTGGACC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CCA 72 bp ACTGGTCCAATGTCTCCTTTGGAATGTGCTCTGTACTaGTGTAATGTGCCACTGGCAACTCTAGGTAATGTT +
Preference number: 3 (lower is better)
Translates to: TGPMSPLECALY*CNVPLATLGNV
Trigger: AACATTACCTAGAGTTGCCAGTGGCACATTACACCAGTACAGAGCACATTCCAAAGGAGACATTGGACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAAAAACGTAGAAAACTaGCCCTGTTACCACGGGTCT +
Preference number: 3 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHKNVEN*PCYHGS
Trigger: AGACCCGTGGTAACAGGGCAAGTTTTCTACGTTTTT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAAAAAGGAAGAGAATGTaGGGGGCCATCTGTAGGTGC +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRKRKRM*GAICRC
Trigger: GCACCTACAGATGGCCCCCAACATTCTCTTCCTTTT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTAATAATAGGTTCTCTTaGCCCCTTTCTTTTCCGACT +
Preference number: 3 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLNNRFS*PLSFPT
Trigger: AGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTATT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATTCCATTATATTCCATaGCCTGCCTCCCCCAACTTG +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRFHYIP*PASPNL
Trigger: CAAGTTGGGGGAGGCAGGCAATGGAATATAATGGAA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAACAGCCCATTAAGGTaGACTAGAAGCAAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHNSPLR*TRSKRK
Trigger: CTTCCTTTTGCTTCTAGTCAACCTTAATGGGCTGTT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACTGGTCACCATGGTATaGCAGCTGATAGTTACAGCT +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLVTMV*QLIVTA
Trigger: AGCTGTAACTATCAGCTGCAATACCATGGTGACCAG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGGCTCTAATTCCCCATaGAGGCGCTTATACATATAT +
Preference number: 3 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHGSNSP*RRLYIY
Trigger: ATATATGTATAAGCGCCTCAATGGGGAATTAGAGCC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR TCA 72 bp TTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTaGTGGCCACATTGTAACCCTCTTGAAGGAAGACAG +
Preference number: 3 (lower is better)
Translates to: LLNTLSTVWFPV*WPHCNPLEGRQ
Trigger: CTGTCTTCCTTCAAGAGGGTTACAATGTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR TCA 72 bp CTCTTTGGCTCATGCCAATGCTTTTTCTTGTGCCTCTaGATTCCTGCTCTTGTTAGTAAAGGATGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: LFGSCQCFFLCL*IPALVSKGCLF
Trigger: AAACAAGCATCCTTTACTAACAAGAGCAGGAATTCAGAGGCACAAGAAAAAGCATTGGCATGAGCCAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 72 bp TTCCATATTTTCACAGCCATCTCCGAAAGCAGCAGTTaGTGTAAATTAACTGAGACTTGGAAATGGTGCAGA +
Preference number: 3 (lower is better)
Translates to: FHIFTAISESSS*CKLTETWKWCR
Trigger: TCTGCACCATTTCCAAGTCTCAGTTAATTTACAGCAACTGCTGCTTTCGGAGATGGCTGTGAAAATATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTAAAAGGAAGAGAATGTaGGGGGCCATCTGTAGGTGC +
Preference number: 3 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSKRKRM*GAICRC
Trigger: GCACCTACAGATGGCCCCCAACATTCTCTTCCTTTT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAATAATAGGTTCTCTTaGCCCCTTTCTTTTCCGACT +
Preference number: 3 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHNNRFS*PLSFPT
Trigger: AGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTATT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGGTCCAATGTCTCCTTaGGAATGTGCTCTGTACTGG +
Preference number: 3 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSGPMSP*ECALYW
Trigger: CCAGTACAGAGCACATTCCAAAGGAGACATTGGACC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACACATTGTAACCCTCTaGAAGGAAGACAGTGTCCTA +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRHIVTL*KEDSVL
Trigger: TAGGACACTGTCTTCCTTCAAGAGGGTTACAATGTG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACATCAGGATTCCCTTTaGTTCTGTTACCTTGACTTG +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRHQDSL*FCYLDL
Trigger: CAAGTCAAGGTAACAGAACAAAAGGGAATCCTGATG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACATTTTGGTGAGAGGATaGGATCTCATTTTTCACCTT +
Preference number: 3 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHILVRG*DLIFHL
Trigger: AAGGTGAAAAATGAGATCCAATCCTCTCACCAAAAT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 72 bp GCTCTGCTTAAAAACTGGCAAATAATAGGTTCTCTTTaGCCCTTTCTTTTCCGACTTATAGGACATCAAAGG +
Preference number: 3 (lower is better)
Translates to: ALLKNWQIIGSL*PFLFRLIGHQR
Trigger: CCTTTGATGTCCTATAAGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTATTTGCCAGTTTTTAAGCAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 72 bp TGCCCATATTTATTTTTATTATCTCCTGCCAGTCTTTaGTCAATGGGAGATGACAGACCAACTTCTCAACGT +
Preference number: 3 (lower is better)
Translates to: CPYLFLLSPASL*SMGDDRPTSQR
Trigger: ACGTTGAGAAGTTGGTCTGTCATCTCCCATTGAGCAAAGACTGGCAGGAGATAATAAAAATAAATATGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACTTGACTTTATTGTGTaGTGTCCATTTACAGGACAC +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLDFIV*CPFTGH
Trigger: GTGTCCTGTAAATGGACACAACACAATAAAGTCAAG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR TCA 72 bp CACAAGCCACAAAGTAAGTCTTTCACTAGGCTCCGTTaGCTTCAGTCTTTATATAAGGGTTTCAAGGTATTT +
Preference number: 3 (lower is better)
Translates to: HKPQSKSFTRLR*LQSLYKGFKVF
Trigger: AAATACCTTGAAACCCTTATATAAAGACTGAAGTCAACGGAGCCTAGTGAAAGACTTACTTTGTGGCTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR TCA 72 bp AACTTAGTAAAATCTAGAACTGTTTCTTGGCCTACTTaGGAGGAACTTCCATATTTTCACAGCCATCTCCGA +
Preference number: 3 (lower is better)
Translates to: NLVKSRTVSWPT*EELPYFHSHLR
Trigger: TCGGAGATGGCTGTGAAAATATGGAAGTTCCTCTCAAGTAGGCCAAGAAACAGTTCTAGATTTTACTAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR GCA 72 bp AAAAATACTGCTGTGAAAGAAATGTACTTTAAAGTTTaGAGCACTACCATGCAGGGTACATGGAGAATAGGC +
Preference number: 3 (lower is better)
Translates to: KNTAVKEMYFKV*STTMQGTWRIG
Trigger: GCCTATTCTCCATGTACCCTGCATGGTAGTGCTGCAAACTTTAAAGTACATTTCTTTCACAGCAGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTAACAGCCCATTAAGGTaGACTAGAAGCAAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSNSPLR*TRSKRK
Trigger: CTTCCTTTTGCTTCTAGTCAACCTTAATGGGCTGTT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAATGCATTGTCCCCATTaGTTTACAGGAAGTGTATTA +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRMHCPH*FTGSVL
Trigger: TAATACACTTCCTGTAAACAAATGGGGACAATGCAT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGAAAAAGTGATCATATaGAATTCCTCAGAATGGTGG +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVREKVII*NSSEWW
Trigger: CCACCATTCTGAGGAATTCAATATGATCACTTTTTC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATATCCAAGGAGAGAGTaGGAAGAAAGACTTAATTCT +
Preference number: 3 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRYPRRE*EERLNS
Trigger: AGAATTAAGTCTTTCTTCCAACTCTCTCCTTGGATA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTAATAATAGGTTCTCTTaGCCCCTTTCTTTTCCGACT +
Preference number: 3 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSNNRFS*PLSFPT
Trigger: AGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTATT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR-3UTR CAA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTATGCATTGTCCCCATTaGTTTACAGGAAGTGTATTA +
Preference number: 3 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSMHCPH*FTGSVL
Trigger: TAATACACTTCCTGTAAACAAATGGGGACAATGCAT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCCCGGCGGGCAGCTTTaGGTCCACCGCTCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSPGGQL*VHRSRD
Trigger: ATCCCGAGAGCGGTGGACTCAAAGCTGCCCGCCGGG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGCGAGGCCCCGCAGTTaGACTCCACCAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSARPRS*TPPARP
Trigger: AGGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCCCTGGATGTGGACGTaGGCCGAGGCGTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSPWMWT*AEAFVC
Trigger: GCAGACAAACGCCTCGGCTCACGTCCACATCCAGGG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCAGCTCCAGGCGGGTGTaGCCTTCTGTTGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSSRRV*PSVGAL
Trigger: CAAGGCCCCAACAGAAGGCCACACCCGCCTGGAGCT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGAGGGGCGATCTGGTTaGACTGGACTCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSEGRSG*TGLWRG
Trigger: GCCTCTCCAGAGTCCAGTTCAACCAGATCGCCCCTC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGCCGAGGCGTTTGTCTaGCTCAAGGCGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSAEAFV*LKAALR
Trigger: TCTCAAGGCCGCCTTGAGGCAGACAAACGCCTCGGC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGGCGTCCGCGCTCTCTaGCGACTCCGCCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSGVRAL*RLRPLC
Trigger: GCAAAGGGGGCGGAGTCGGCAGAGAGCGCGGACGCC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGAGGAGGAGGAGGTTaGAGTGAGCCCGAGATTGCG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGGGGG*SEPEIA
Trigger: CGCAATCTCGGGCTCACTGCAACCTCCTCCTCCTCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGCCACTGGTCATCGTTaGGAGGGGTTGGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSATGHR*EGLVTS
Trigger: TGAGGTCACCAACCCCTCTCAACGATGACCAGTGGC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGTGGACGGATCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCCGTCCACC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGGGGCCTTGCGGATCTaGTGCGGTAGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSGALRI*CGSRST
Trigger: GGTGGACCGGCTACCGCAGCAGATCCGCAAGGCCCC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCACTGAGAACAGGTCCTaGTTAAGCCGTCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSTENRS*LSRPGT
Trigger: GGTGCCCGGACGGCTTAACCAGGACCTGTTCTCAGT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGTGACCCGGTGCCACTaGTCATCGTTGAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSVTRCH*SSLRGV
Trigger: AACCCCTCTCAACGATGACCAGTGGCACCGGGTCAC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGGTGGGAGTTCTGCTaGTCGGGAGCGTTGTCTACT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGWEFC*SGALST
Trigger: AGTAGACAACGCTCCCGACCAGCAGAACTCCCACCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATGCAGAGGCAGCTGCTaGCAATCCACAGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATCRGSC*QSTAGA
Trigger: CGCTCCTGCTGTGGATTGTCAGCAGCTGCCTCTGCA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGAGGGGCGATCTGGTTaGACTGGACTCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATEGRSG*TGLWRG
Trigger: GCCTCTCCAGAGTCCAGTTCAACCAGATCGCCCCTC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCTGCAGTGACCCGGTaGCACTGGTCATCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSAVTR*HWSSLR
Trigger: TCTCAACGATGACCAGTGGCACCGGGTCACTGCAGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGCCGAGGCGTTTGTCTaGCTCAAGGCGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATAEAFV*LKAALR
Trigger: TCTCAAGGCCGCCTTGAGGCAGACAAACGCCTCGGC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGGCGTCCGCGCTCTCTaGCGACTCCGCCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLGVRAL*RLRPLC
Trigger: GCAAAGGGGGCGGAGTCGGCAGAGAGCGCGGACGCC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCTGAAGTGCTTCCAATaGCTTCGCCTGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLKCFQ*LRLCPA
Trigger: AGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGGTTGCAATGGCACTaGTCTGCTTCCGATTGCCAA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGLQWH*SASDCQ
Trigger: TTGGCAATCGGAAGCAGATCAGTGCCATTGCAACCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACATTCCTCTCTGCAGTaGCCCGGTGCCACTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATHSSLQ*PGATGH
Trigger: ATGACCAGTGGCACCGGGTCACTGCAGAGAGGAATG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGTCCATGACAGTGCCTaGGCTCAACCAGCAATGGTA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSVHDSA*AQPAMV
Trigger: TACCATTGCTGGTTGAGCTCAGGCACTGTCATGGAC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTGTATGGCTCTCGGGTaGCACCCAGGTTGTATCGAA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSCMALG*HPGCIE
Trigger: TTCGATACAACCTGGGTGGCACCCGAGAGCCATACA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGTCAGGAACCCCAGATaGCAGAGAGCTGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSVRNPR*QRAGID
Trigger: ATCTATGCCAGCTCTCTGGCATCTGGGGTTCCTGAC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTCTACTGCTGGAGCTaGGCTTGCCAGAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSFYCWS*ACQRKG
Trigger: TCCCTTTCTCTGGCAAGCCCAGCTCCAGCAGTAGAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTGTGGGGCTGTCCATTaGCCATGTTCCTGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSCGAVH*PCSCGL
Trigger: TAGACCACAGGAACATGGCCAATGGACAGCCCCACA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGTGATGTTGACACTGTaGGGCTGTCCATTGGCCATG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSVMLTL*GCPLAM
Trigger: CATGGCCAATGGACAGCCCCACAGTGTCAACATCAC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTGAGAGGGGCGATCTaGTTGAACTGGACTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLRGAI*LNWTLE
Trigger: CTCCAGAGTCCAGTTCAACCAGATCGCCCCTCTCAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGGTGCCAGGGGTCGGTaGCGGACGACATGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLGARGR*RTTWGR
Trigger: TCTCCCCCATGTCGTCCGCCACCGACCCCTGGCACC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGGGGTAGGAGCCATTaGTTCTTAGCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGGRSH*FLAEVS
Trigger: GCTGACTTCAGCTAAGAACCAATGGCTCCTACCCCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTTGCAAGGCCGAGGTaGACGGATCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSFARPR*TDHLRS
Trigger: TGACCTCAAGTGATCCGTCCACCTCGGCCTTGCAAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGCTCAATTTGGCTTCTaGGCCTTGACGGTCAGTATC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSAQFGF*ALTVSI
Trigger: GATACTGACCGTCAAGGCTCAGAAGCCAAATTGAGC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGAAGAGGGTGTCGGATaGACTTGGCAGATGGTAACT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSEEGVG*TWQMVT
Trigger: AGTTACCATCTGCCAAGTTCATCCGACACCCTCTTC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGAGGGGCGATCTGGTTaGACTGGACTCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSEGRSG*TGLWRG
Trigger: GCCTCTCCAGAGTCCAGTTCAACCAGATCGCCCCTC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCCATTGGTTCTTAGCTaGAGTCAGCTGGGGACATTG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSPLVLS*SQLGTL
Trigger: CAATGTCCCCAGCTGACTTCAGCTAAGAACCAATGG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCCCTGGCCAACATGGTaGAACCTGGCTTCTACTAAT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSPWPTW*NLASTN
Trigger: ATTAGTAGAAGCCAGGTTTCACCATGTTGGCCAGGG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCATGGTTATGGAGGCTaGACTGTGCTAGGCTATCCA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSHGYGG*TVLGYP
Trigger: TGGATAGCCTAGCACAGTGCAGCCTCCATAACCATG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTGCTTGTTCCTGAAGTaGTTCCAATGGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSCLFLK*FQWLRL
Trigger: CAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGGAGGAGGAGGAGGTTaGAGTGAGCCCGAGATTGCG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSGGGGG*SEPEIA
Trigger: CGCAATCTCGGGCTCACTGCAACCTCCTCCTCCTCC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCACTTATCTGGTCCATaGAGGCGCTGTAAACGAGCT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSHLSGP*RRCKRA
Trigger: AGCTCGTTTACAGCGCCTCCATGGACCAGATAAGTG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCGGTGGCGGACGACATaGGGGAGAGGGTCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQRWRTT*GRGSAA
Trigger: CGCCGCTGACCCTCTCCCCCATGTCGTCCGCCACCG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGAATGTCATGGTTATaGAGGCTGCACTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGMSWL*RLHCAR
Trigger: CCTAGCACAGTGCAGCCTCCATAACCATGACATTCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCAGCCTGCATATGGTaGCCGCTCAGCAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSACIW*PLSRFS
Trigger: TGAAAATCTGCTGAGCGGCCACCATATGCAGGCTGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTGAAGTGCTTCCAATaGCTTCGCCTGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLKCFQ*LRLCPA
Trigger: AGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGCCCCTGGCGCTCAATaGCCACAGAGTGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLAPGAQ*PQSASG
Trigger: ACCACTGGCACTCTGTGGTCATTGAGCGCCAGGGGC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCCCTGGATGTGGACGTaGGCCGAGGCGTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLPWMWT*AEAFVC
Trigger: GCAGACAAACGCCTCGGCTCACGTCCACATCCAGGG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTGGGGTCGTTGTTCATaGTGGCGGCGTCCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLWGRCS*WRRPRS
Trigger: AGAGCGCGGACGCCGCCATCATGAACAACGACCCCA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCATCAATGGTCTCTGTaGAGTTGGGGTCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSHQWSL*SWGRCS
Trigger: TGAACAACGACCCCAACTTCACAGAGACCATTGATG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCTGGACCAGCTTTCTTaGGCTCTAGGGAATATGCTA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLDQLS*ALGNML
Trigger: TAGCATATTCCCTAGAGCTCAAGAAAGCTGGTCCAG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATTGGTACGGAAGTGCTaGATGCTCCTGTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLVRKC*MLLSRV
Trigger: CACTCTGGACAGGAGCATGCAGCACTTCCGTACCAA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGCGTCCGCGCTCTCTaGCGACTCCGCCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGVRAL*RLRPLC
Trigger: GCAAAGGGGGCGGAGTCGGCAGAGAGCGCGGACGCC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGGGTGGGAGTTCTGCTaGTCGGGAGCGTTGTCTACT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSGWEFC*SGALST
Trigger: AGTAGACAACGCTCCCGACCAGCAGAACTCCCACCC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGCGATCTGGTTGAACTaGACTCTGGAGAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATAIWLN*TLERQP
Trigger: TGGTTGCCTCTCCAGAGTCCAGTTCAACCAGATCGC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATTGAGAGGGGCGATCTaGTTGAACTGGACTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLRGAI*LNWTLE
Trigger: CTCCAGAGTCCAGTTCAACCAGATCGCCCCTCTCAA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGCGAGGCCCCGCAGTTaGACTCCACCAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHARPRS*TPPARP
Trigger: AGGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGCGAGGCCCCGCAGTTaGACTCCACCAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQARPRS*TPPARP
Trigger: AGGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCGGTGGCGGACGACATaGGGGAGAGGGTCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSRWRTT*GRGSAA
Trigger: CGCCGCTGACCCTCTCCCCCATGTCGTCCGCCACCG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCTTCCTTCAACTGCTaGTATCAGTCAGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSSFNC*YQSGTP
Trigger: TGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGAATGTGCTCTGTACTaGTGTAATGTGCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSECALY*CNVPLA
Trigger: TGCCAGTGGCACATTACACCAGTACAGAGCACATTC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTCTCAGCCTGCATATaGTGGCCGCTCAGCAGATTT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLSACI*WPLSRF
Trigger: AAATCTGCTGAGCGGCCACCATATGCAGGCTGAGAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CAA 72 bp AGCTCCATCTTAAATACGGGACAAAAGTTCGAGGACTaGACCAAGGTCACACAGGGAGGGTCCCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: SSILNTGQKFED*TKVTQGGSHQG
Trigger: GCCTTGGTGGGACCCTCCCTGTGTGACCTTGGTCAAGTCCTCGAACTTTTGTCCCGTATTTAAGATGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACCCTGGCCAACATGGTaGAACCTGGCTTCTACTAAT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATPWPTW*NLASTN
Trigger: ATTAGTAGAAGCCAGGTTTCACCATGTTGGCCAGGG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAGGAAGCGAACCTCGTaGCACTGTCCATCATTCAAC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATRKRTS*HCPSFN
Trigger: GTTGAATGATGGACAGTGGCACGAGGTTCGCTTCCT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGGGCCTTGCGGATCTaGTGCGGTAGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGALRI*CGSRST
Trigger: GGTGGACCGGCTACCGCAGCAGATCCGCAAGGCCCC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACGTTGTCTACTCTGCTaGTGGAGTCTCTGGCATTTG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATRCLLC*WSLWHL
Trigger: CAAATGCCAGAGACTCCAGCAGCAGAGTAGACAACG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCCATTATATTCCATTaGCTGCCTCCCCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSIIFH*LPPPTC
Trigger: ACAAGTTGGGGGAGGCAGGCAATGGAATATAATGGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGGGCCATCTGTAGGTaGATTAGCTTTTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGAICR*ISFSQE
Trigger: TTCTTGAGAAAAGCTAATGCACCTACAGATGGCCCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAACACACCAGGTGCCATaGACTCTCTTCCTTCAACTG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATTHQVP*TLFLQL
Trigger: CAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGAGAGAGAAAGGGGATaGTGTCAGCTAATTCTCATG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSERERG*CQLILM
Trigger: CATGAGAATTAGCTGACAGCATCCCCTTTCTCTCTC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGCCCCGGTTCAGGTGTaGCCCTCGCTTTGTGATGCA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLAPVQV*PSLCDA
Trigger: TGCATCACAAAGCGAGGGGCACACCTGAACCGGGGC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGAGTCCAGAGACAAGTaGCTCATCACATTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSESRDK*LITFLG
Trigger: TCCCAAAAATGTGATGAGCCACTTGTCTCTGGACTC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCGAGGCCCCGCAGTTaGACTCCACCAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSARPRS*TPPARP
Trigger: AGGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACGGTGGCGGACGACATaGGGGAGAGGGTCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRRWRTT*GRGSAA
Trigger: CGCCGCTGACCCTCTCCCCCATGTCGTCCGCCACCG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGTGCCAGGGGTCGGTaGCGGACGACATGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGARGR*RTTWGR
Trigger: TCTCCCCCATGTCGTCCGCCACCGACCCCTGGCACC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACAGATGCCAGAGAGCTaGCATAGATTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATQMPES*HRLSSA
Trigger: AGCAGAGCTCAATCTATGCCAGCTCTCTGGCATCTG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGGAATGTCATGGTTATaGAGGCTGCACTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATGMSWL*RLHCAR
Trigger: CCTAGCACAGTGCAGCCTCCATAACCATGACATTCC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCTGTTTGTTTCGCACTaGTTTAGGATCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLFVSH*FRIRWF
Trigger: GAACCACCTGATCCTAAACCAGTGCGAAACAAACAG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTTCCATGCAGCCTTTaGAATTCTTTCTACTGCTGG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSFPCSL*NSFYCW
Trigger: CCAGCAGTAGAAAGAATTTCAAAGGCTGCATGGAAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCATTCAACCCAGAACCTaGGGAAATATCGATTTGGCT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSIQPRT*GNIDLA
Trigger: AGCCAAATCGATATTTCCTCAGGTTCTGGGTTGAAT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACATCACAAGTGCATTTaGAGCTGTCCCATGTTTGCG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATHHKCI*SCPMFA
Trigger: CGCAAACATGGGACAGCTTCAAATGCACTTGTGATG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGTCCATGACAGTGCCTaGGCTCAACCAGCAATGGTA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSVHDSA*AQPAMV
Trigger: TACCATTGCTGGTTGAGCTCAGGCACTGTCATGGAC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTGGACCAGCTTTCTTaGGCTCTAGGGAATATGCTA +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLDQLS*ALGNML
Trigger: TAGCATATTCCCTAGAGCTCAAGAAAGCTGGTCCAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGAAAGAAAAGCTTCTTaGCACAACCTGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSERKAS*HNLNTC
Trigger: GCAAGTGTTCAGGTTGTGTCAAGAAGCTTTTCTTTC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTAGCTACTTGGGAGGCTaGGGCAGGAGAATCGCCTCA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLSYLGG*GRRIAS
Trigger: TGAGGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAGTACTTGGGATCTGTaGAGTTGCGTTCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSSTWDL*SCVRCR
Trigger: GCGGCATCGAACGCAACTGCACAGATCCCAAGTACT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGCGGATCTCCTCCTGTaGCAGGTCCGGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQADLLL*QVRVGV
Trigger: AACTCCCACCCGGACCTGGCACAGGAGGAGATCCGC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACGTTGGTATGGTAGGTaGCCTTGTGGCGGAACATGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSRWYGR*PCGGTC
Trigger: ACATGTTCCGCCACAAGGGCACCTACCATACCAACG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGTCAGGAACCCCAGATaGCAGAGAGCTGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSVRNPR*QRAGID
Trigger: ATCTATGCCAGCTCTCTGGCATCTGGGGTTCCTGAC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCAGACTCTTTGGCTCATaGCAATGCTTTTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSRLFGS*QCFFLC
Trigger: GCACAAGAAAAAGCATTGGCATGAGCCAAAGAGTCT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGCCCAGCTCTCAGCCTaGATATGGTGGCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQAQLSA*IWWPLS
Trigger: GCTGAGCGGCCACCATATGCAGGCTGAGAGCTGGGC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCTGGCATTTGTTGCTaGTGCCTGAAAGTTATATCG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSGICC*CLKVIS
Trigger: CGATATAACTTTCAGGCACCAGCAACAAATGCCAGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGCGATCTGGTTGAACTaGACTCTGGAGAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSAIWLN*TLERQP
Trigger: TGGTTGCCTCTCCAGAGTCCAGTTCAACCAGATCGC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGCGAGGCCCCGCAGTTaGACTCCACCAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRARPRS*TPPARP
Trigger: AGGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACCCCCTTTGCTTCGTTaGTATGGTAGGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSPPLLR*YGRCPC
Trigger: ACAAGGGCACCTACCATACCAACGAAGCAAAGGGGG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGAATGTGCTCTGTACTaGTGTAATGTGCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATECALY*CNVPLA
Trigger: TGCCAGTGGCACATTACACCAGTACAGAGCACATTC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATGGGCGGGAATGTCATaGTTATGGAGGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSWAGMS*LWRLHC
Trigger: ACAGTGCAGCCTCCATAACCATGACATTCCCGCCCA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGCTTTTTCAACCTCCTaGACCAGCTTTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATAFSTS*TSFLEL
Trigger: GAGCTCAAGAAAGCTGGTCCAGGAGGTTGAAAAAGC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTAGCTGAAGTCAGCTaGGGACATTGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSLAEVS*GHCYCL
Trigger: CAAACAGTAACAATGTCCCCAGCTGACTTCAGCTAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAGAATCGCCTCAATGTaGGAGGAGGAGGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSRIASM*EEEEVA
Trigger: TGCAACCTCCTCCTCCTCCCACATTGAGGCGATTCT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTATAATGGTCGCTGTCTaGTGGAGACCATCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLIMVAV*WRPSPS
Trigger: GCTGGGGGATGGTCTCCATCAGACAGCGACCATTAT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATATCCGCAAAGTGACTaGAGACCAGGAGACCATTGG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSYPQSD*RPGDHW
Trigger: CCAATGGTCTCCTGGTCTTCAGTCACTTTGCGGATA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGAGGGGCGATCTGGTTaGACTGGACTCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHEGRSG*TGLWRG
Trigger: GCCTCTCCAGAGTCCAGTTCAACCAGATCGCCCCTC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCCTGGATGTGGACGTaGGCCGAGGCGTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPWMWT*AEAFVC
Trigger: GCAGACAAACGCCTCGGCTCACGTCCACATCCAGGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGGGGTCGTTGTTCATaGTGGCGGCGTCCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSWGRCS*WRRPRS
Trigger: AGAGCGCGGACGCCGCCATCATGAACAACGACCCCA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATCCCCCAACTTGTGCTaGTATTTTAAGGATGTGCTC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATSPNLC*YFKDVL
Trigger: GAGCACATCCTTAAAATATCAGCACAAGTTGGGGGA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAGAGCTGGCATAGATTaGGCTCTGCTTAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATRAGID*ALLKNW
Trigger: CCAGTTTTTAAGCAGAGCTCAATCTATGCCAGCTCT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGGAATATGCTATTTTaGGAGCTTAGGATCTCACTA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGNMLF*ELRISL
Trigger: TAGTGAGATCCTAAGCTCTCAAAATAGCATATTCCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACTGTGTGCTTGTTCCTaGAGTGCTTCCAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSLCACS*SASNGF
Trigger: GAAGCCATTGGAAGCACTTCAGGAACAAGCACACAG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATGTTGTTTGGAGGCATaGGACATAAACGGGCCATTA +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATCCLEA*DINGPL
Trigger: TAATGGCCCGTTTATGTCTCATGCCTCCAAACAACA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACCCTGGCCAACATGGTaGAACCTGGCTTCTACTAAT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSPWPTW*NLASTN
Trigger: ATTAGTAGAAGCCAGGTTTCACCATGTTGGCCAGGG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTCACTAGGCTCCGTTaGCTTCAGTCTTTATATAAG +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSFTRLR*LQSLYK
Trigger: CTTATATAAAGACTGAAGTCAACGGAGCCTAGTGAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCACCAACTTCTCAACGTaGTTTCCCCATTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSTNFST*FPHFIE
Trigger: TTCAATGAAATGGGGAAATCACGTTGAGAAGTTGGT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGTTTCTTGGCCTACTTaGGAGGAACTTCCATATTTT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSVSWPT*EELPYF
Trigger: AAAATATGGAAGTTCCTCTCAAGTAGGCCAAGAAAC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGGATGCTGTAATTCGTaGCGGACCACACCGTCAGAG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLGCCNS*RTTPSE
Trigger: CTCTGACGGTGTGGTCCGGCACGAATTACAGCATCC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCCTTGCGGATCTGCTaGGGTAGCCGGTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSALRIC*GSRSTC
Trigger: ACAGGTGGACCGGCTACCGCAGCAGATCCGCAAGGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACGTTGTCTACTCTGCTaGTGGAGTCTCTGGCATTTG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSRCLLC*WSLWHL
Trigger: CAAATGCCAGAGACTCCAGCAGCAGAGTAGACAACG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCGGATCTCCTCCTGTaGCAGGTCCGGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSADLLL*QVRVGV
Trigger: AACTCCCACCCGGACCTGGCACAGGAGGAGATCCGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGCCGAGGCGTTTGTCTaGCTCAAGGCGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHAEAFV*LKAALR
Trigger: TCTCAAGGCCGCCTTGAGGCAGACAAACGCCTCGGC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGGCGTCCGCGCTCTCTaGCGACTCCGCCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSGVRAL*RLRPLC
Trigger: GCAAAGGGGGCGGAGTCGGCAGAGAGCGCGGACGCC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATCCATTATATTCCATTaGCTGCCTCCCCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATSIIFH*LPPPTC
Trigger: ACAAGTTGGGGGAGGCAGGCAATGGAATATAATGGA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGGGGCCATCTGTAGGTaGATTAGCTTTTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATGAICR*ISFSQE
Trigger: TTCTTGAGAAAAGCTAATGCACCTACAGATGGCCCC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATCGTTACACACCAGGTaGCATGCACTCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSSLHTR*HALSSF
Trigger: GAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCCCAGCTCTCAGCCTaGATATGGTGGCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSAQLSA*IWWPLS
Trigger: GCTGAGCGGCCACCATATGCAGGCTGAGAGCTGGGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAGTCCCACAGCTGTGTaGTTGTTCCTGAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSSPTAV*LFLKCF
Trigger: GAAGCACTTCAGGAACAAGCACACAGCTGTGGGACT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCGAGATTGCGCCAGTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPRLRQ*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCACTGGCGCAATCTCGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGCCCCGGTTCAGGTGTaGCCCTCGCTTTGTGATGCA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQAPVQV*PSLCDA
Trigger: TGCATCACAAAGCGAGGGGCACACCTGAACCGGGGC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTATATGGGGCCAAGCTaGTTGCTTCCTAAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSYMGPS*LLPKFK
Trigger: TTTAAACTTAGGAAGCAACCAGCTTGGCCCCATATA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGACCTACGCTCAATTTaGCTTCTGAGCCTTGACGGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSDLRSI*LLSLDG
Trigger: ACCGTCAAGGCTCAGAAGCCAAATTGAGCGTAGGTC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGGTGTGGCCTTCTGTTaGGGCCTTGCGGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQGVAFC*GLADLL
Trigger: CAGCAGATCCGCAAGGCCCCAACAGAAGGCCACACC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAGCTCCAGGCGGGTGTaGCCTTCTGTTGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSSRRV*PSVGAL
Trigger: CAAGGCCCCAACAGAAGGCCACACCCGCCTGGAGCT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGTGCCAGGTCCGGGTaGGAGTTCTGCTGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSCARSG*EFCWSG
Trigger: TCCCGACCAGCAGAACTCCCACCCGGACCTGGCACA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATACGTCAATATTGTATaGCTCTCGGGTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSYVNIV*LSGATQ
Trigger: CTGGGTGGCACCCGAGAGCCATACAATATTGACGTA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGTCCAATGTCTCCTTTaGAATGTGCTCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATVQCLL*NVLCTG
Trigger: ACCAGTACAGAGCACATTCCAAAGGAGACATTGGAC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGGAATGTCATGGTTATaGAGGCTGCACTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSGMSWL*RLHCAR
Trigger: CCTAGCACAGTGCAGCCTCCATAACCATGACATTCC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTGTTTGTTTCGCACTaGTTTAGGATCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLFVSH*FRIRWF
Trigger: GAACCACCTGATCCTAAACCAGTGCGAAACAAACAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACATAAACTTCAATTCTaGGTCCAATGCGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATHKLQF*VQCDLL
Trigger: GAGAAGGTCGCATTGGACTCAGAATTGAAGTTTATG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAATTAGTTCGAACTGCTaGTGCTTCATCTCCATCGAT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATISSNC*CFISID
Trigger: ATCGATGGAGATGAAGCATCAGCAGTTCGAACTAAT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATGCATCTGCAAGTCATaGGACACTATGGTCCACACT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSCICKS*DTMVHT
Trigger: AGTGTGGACCATAGTGTCTCATGACTTGCAGATGCA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGAGGGGCGATCTGGTTaGACTGGACTCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSEGRSG*TGLWRG
Trigger: GCCTCTCCAGAGTCCAGTTCAACCAGATCGCCCCTC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACCCTGGATGTGGACGTaGGCCGAGGCGTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRPWMWT*AEAFVC
Trigger: GCAGACAAACGCCTCGGCTCACGTCCACATCCAGGG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACATCAATGGTCTCTGTaGAGTTGGGGTCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSHQWSL*SWGRCS
Trigger: TGAACAACGACCCCAACTTCACAGAGACCATTGATG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACTGGACCAGCTTTCTTaGGCTCTAGGGAATATGCTA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSLDQLS*ALGNML
Trigger: TAGCATATTCCCTAGAGCTCAAGAAAGCTGGTCCAG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGAAAGAAAAGCTTCTTaGCACAACCTGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATERKAS*HNLNTC
Trigger: GCAAGTGTTCAGGTTGTGTCAAGAAGCTTTTCTTTC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAGCTACTTGGGAGGCTaGGGCAGGAGAATCGCCTCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSYLGG*GRRIAS
Trigger: TGAGGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATGCATCTCCCAGTGTTaGCAGGTTAGTCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSCISQC*QVSLHD
Trigger: ATCATGCAGACTAACCTGTCAACACTGGGAGATGCA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATTGCTCAATGGGAGATaGCAGACCAACTTCTCAACG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSLLNGR*QTNFST
Trigger: CGTTGAGAAGTTGGTCTGTCATCTCCCATTGAGCAA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAGCTCGCTGCGGAGATaGAGTCCGACTCTCCGTAGG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSSLRR*SPTLRR
Trigger: CCTACGGAGAGTCGGACTGCATCTCCGCAGCGAGCT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCCATTGGTACGGAAGTaGTGCATGCTCCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLPLVRK*CMLLSR
Trigger: TCTGGACAGGAGCATGCAGCACTTCCGTACCAATGG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTGGGATCTGTGCAGTTaGGTTCGATGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQWDLCS*VRCRRH
Trigger: GTGCCTGCGGCATCGAACGCAACTGCACAGATCCCA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGCCTTGCGGATCTGCTaGGGTAGCCGGTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRALRIC*GSRSTC
Trigger: ACAGGTGGACCGGCTACCGCAGCAGATCCGCAAGGC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCTTCTGTTGGGGCCTTaGGGATCTGCTGCGGTAGCC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLLLGP*GSAAVA
Trigger: GGCTACCGCAGCAGATCCGCAAGGCCCCAACAGAAG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTCCGGGTGGGAGTTCTaGTGGTCGGGAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSGWEF*WSGALS
Trigger: AGACAACGCTCCCGACCAGCAGAACTCCCACCCGGA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTGTATGGCTCTCGGGTaGCACCCAGGTTGTATCGAA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLCMALG*HPGCIE
Trigger: TTCGATACAACCTGGGTGGCACCCGAGAGCCATACA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCCGAGGCGTTTGTCTaGCTCAAGGCGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSAEAFV*LKAALR
Trigger: TCTCAAGGCCGCCTTGAGGCAGACAAACGCCTCGGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCGTTGGTATGGTAGGTaGCCTTGTGGCGGAACATGT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLRWYGR*PCGGTC
Trigger: ACATGTTCCGCCACAAGGGCACCTACCATACCAACG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATTATATTCCATTGCCTaGCTCCCCCAACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSLYSIA*LPQLVL
Trigger: CAGCACAAGTTGGGGGAGGCAGGCAATGGAATATAA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCATAATAGGTTCTCTTTaGCCCTTTCTTTTCCGACTT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSIIGSL*PFLFRL
Trigger: AAGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTAT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACTCTCTTCCTTCAACTaGTGGTATCAGTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSLSSFN*WYQSGT
Trigger: GGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGCCCAGCTCTCAGCCTaGATATGGTGGCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRAQLSA*IWWPLS
Trigger: GCTGAGCGGCCACCATATGCAGGCTGAGAGCTGGGC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGAGGAAATATCGATTTaGCTCATCTTGGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATEEISI*LILVCV
Trigger: CACACAGACCAAGATGAGCCAAATCGATATTTCCTC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAGTTACAGTAGTACTTaGGATCTGTGCAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATSYSST*DLCSCV
Trigger: AACGCAACTGCACAGATCCCAAGTACTACTGTAACT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGTGTGGCCTTCTGTTaGGGCCTTGCGGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGVAFC*GLADLL
Trigger: CAGCAGATCCGCAAGGCCCCAACAGAAGGCCACACC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTGCTGCTGGAGTCTCTaGCATTTGTTGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLCCWSL*HLLLVP
Trigger: AGGCACCAGCAACAAATGCCAGAGACTCCAGCAGCA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATGTGCCAGGTCCGGGTaGGAGTTCTGCTGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRCARSG*EFCWSG
Trigger: TCCCGACCAGCAGAACTCCCACCCGGACCTGGCACA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGGTGCCAGGGGTCGGTaGCGGACGACATGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFGARGR*RTTWGR
Trigger: TCTCCCCCATGTCGTCCGCCACCGACCCCTGGCACC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCCATTTCTTATAGCTTaGCCTTGTCCTGGATTATAT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSPFLIA*PCPGLY
Trigger: ATATAATCCAGGACAAGGCCAAGCTATAAGAAATGG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATCTTCCTTCAACTGCTaGTATCAGTCAGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSSSFNC*YQSGTP
Trigger: TGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAATCTTTTGTAACAGCTaGTCACCATGGTATTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATIFCNS*SPWYCS
Trigger: GCTGCAATACCATGGTGACCAGCTGTTACAAAAGAT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCACTTCTCCATCCTCTaGGAAGCAACAGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLHFSIL*EATGTR
Trigger: CCTGGTACCTGTTGCTTCCCAGAGGATGGAGAAGTG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGGGGGTAGGAGCCATTaGTTCTTAGCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLGGRSH*FLAEVS
Trigger: GCTGACTTCAGCTAAGAACCAATGGCTCCTACCCCC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTAGAATCGCCTCAATGTaGGAGGAGGAGGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLRIASM*EEEEVA
Trigger: TGCAACCTCCTCCTCCTCCCACATTGAGGCGATTCT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCCACTGGTCATCGTTaGGAGGGGTTGGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSATGHR*EGLVTS
Trigger: TGAGGTCACCAACCCCTCTCAACGATGACCAGTGGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCATTCCTCTCTGCAGTaGCCCGGTGCCACTGGTCAT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSHSSLQ*PGATGH
Trigger: ATGACCAGTGGCACCGGGTCACTGCAGAGAGGAATG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGGGGTGTTGTATTTGTaGATCTCTTGGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATGVLYL*ISWSIF
Trigger: GAAAATTGACCAAGAGATTCACAAATACAACACCCC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATCCCCCAACTTGTGCTaGTATTTTAAGGATGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSSPNLC*YFKDVL
Trigger: GAGCACATCCTTAAAATATCAGCACAAGTTGGGGGA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAGCAGGATTAGGCACTaGGAGCTTGGGCGGGAATGT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSRIRH*ELGREC
Trigger: ACATTCCCGCCCAAGCTCTCAGTGCCTAATCCTGCT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATGTTGTTTGGAGGCATaGGACATAAACGGGCCATTA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSCCLEA*DINGPL
Trigger: TAATGGCCCGTTTATGTCTCATGCCTCCAAACAACA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCCATTGGTTCTTAGCTaGAGTCAGCTGGGGACATTG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLPLVLS*SQLGTL
Trigger: CAATGTCCCCAGCTGACTTCAGCTAAGAACCAATGG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAGCTACTTGGGAGGCTaGGGCAGGAGAATCGCCTCA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSYLGG*GRRIAS
Trigger: TGAGGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATTCACTAGGCTCCGTTaGCTTCAGTCTTTATATAAG +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATFTRLR*LQSLYK
Trigger: CTTATATAAAGACTGAAGTCAACGGAGCCTAGTGAA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAATTTGTCTTTTGATGTaGCTTTCAACCACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATICLLM*LSTTSH
Trigger: GTGGCTTGTGGTTGAAAGTCACATCAAAAGACAAAT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGCTCCAAGAGCTCGCTaGGGAGATGCAGTCCGACTC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRAPRAR*GDAVRL
Trigger: GAGTCGGACTGCATCTCCGCAGCGAGCTCTTGGAGC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCACAATCTTGACATCTTaGAGAAATAGGAGACATACT +
Preference number: 4 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSTILTS*RNRRHT
Trigger: AGTATGTCTCCTATTTCTGCAAGATGTCAAGATTGT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCTTGACATTCCTCTCTaGAGTGACCCGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHLDIPL*SDPVPL
Trigger: CAGTGGCACCGGGTCACTGCAGAGAGGAATGTCAAG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTTGTTCCATAGCTGGTaGAATGGCCCGAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHLFHSW*NGPSIR
Trigger: CCGGATGCTCGGGCCATTGCACCAGCTATGGAACAA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCCGGGTGGGAGTTCTaGTGGTCGGGAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSGWEF*WSGALS
Trigger: AGACAACGCTCCCGACCAGCAGAACTCCCACCCGGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGGGTTTGACGAGGACTaGCAAGAAGTCTGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLGFDED*QEVCGE
Trigger: TTCACCACAGACTTCTTGGCAGTCCTCGTCAAACCC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCGACTCCGCCCCCTTTaGTTCGTTGGTATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHRLRPL*FVGMVG
Trigger: ACCTACCATACCAACGAAGCAAAGGGGGCGGAGTCG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTCGTTACACACCAGGTaGCATGCACTCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLSLHTR*HALSSF
Trigger: GAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTGCTTGTTCCTGAAGTaGTTCCAATGGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLCLFLK*FQWLRL
Trigger: CAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGGAGGAGGAGGAGGTTaGAGTGAGCCCGAGATTGCG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRGGGGG*SEPEIA
Trigger: CGCAATCTCGGGCTCACTGCAACCTCCTCCTCCTCC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGGCTCATCACATTTTTaGGACGTGGAGGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQGSSHF*DVEGAV
Trigger: GACGGCTCCCTCCACGTCCCAAAAATGTGATGAGCC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGTGACCCGGTGCCACTaGTCATCGTTGAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSVTRCH*SSLRGV
Trigger: AACCCCTCTCAACGATGACCAGTGGCACCGGGTCAC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGGTGGGAGTTCTGCTaGTCGGGAGCGTTGTCTACT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGWEFC*SGALST
Trigger: AGTAGACAACGCTCCCGACCAGCAGAACTCCCACCC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTACGTCAATATTGTATaGCTCTCGGGTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLYVNIV*LSGATQ
Trigger: CTGGGTGGCACCCGAGAGCCATACAATATTGACGTA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTAAGATGGTCTTCTCGTaGCGGGTGATGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLKMVFS*RVMLTL
Trigger: CAGTGTCAACATCACCCGCCACGAGAAGACCATCTT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGTCCAATGTCTCCTTTaGAATGTGCTCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSVQCLL*NVLCTG
Trigger: ACCAGTACAGAGCACATTCCAAAGGAGACATTGGAC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTCAGCCTGCATATGGTaGCCGCTCAGCAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLSACIW*PLSRFS
Trigger: TGAAAATCTGCTGAGCGGCCACCATATGCAGGCTGA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAGGTGGCTTTCCCACTaGCCGGGTCAGACTTCAGAA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHRWLSH*PGQTSE
Trigger: TTCTGAAGTCTGACCCGGCCAGTGGGAAAGCCACCT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAAGGACAGAGTGACTTaGGTTATTCATCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSKDRVT*VIHLVQ
Trigger: CTGAACCAGATGAATAACTCAAGTCACTCTGTCCTT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAGCTTCCAGTGGGTTTaGCGAGGACTGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSFQWV*RGLPRS
Trigger: ACTTCTTGGCAGTCCTCGTCAAACCCACTGGAAGCT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGAGCTTCCAGTGGGTTTaGCGAGGACTGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQSFQWV*RGLPRS
Trigger: ACTTCTTGGCAGTCCTCGTCAAACCCACTGGAAGCT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCCCTGGATGTGGACGTaGGCCGAGGCGTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFPWMWT*AEAFVC
Trigger: GCAGACAAACGCCTCGGCTCACGTCCACATCCAGGG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTGGGGTCGTTGTTCATaGTGGCGGCGTCCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSWGRCS*WRRPRS
Trigger: AGAGCGCGGACGCCGCCATCATGAACAACGACCCCA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGGTTTGAAATTTTGGTaGGAGGATTGGATCTCATTT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATGLKFW*EDWISF
Trigger: AAATGAGATCCAATCCTCTCACCAAAATTTCAAACC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAGCAGGATTAGGCACTaGGAGCTTGGGCGGGAATGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSRIRH*ELGREC
Trigger: ACATTCCCGCCCAAGCTCTCAGTGCCTAATCCTGCT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGATGTCAAGATTTTGTaGGATGTGAATGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATDVKIL*DVNDKA
Trigger: TGCTTTGTCATTCACATCTCACAAAATCTTGACATC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGGTGGACGGATCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRGGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCCGTCCACC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTTGCTCAATGGGAGATaGCAGACCAACTTCTCAACG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLLLNGR*QTNFST
Trigger: CGTTGAGAAGTTGGTCTGTCATCTCCCATTGAGCAA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAATGTTTCCGGGAAATaGCCAGATATTCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSNVSGK*PDIPIL
Trigger: CAAGATGGGAATATCTGGGCATTTCCCGGAAACATT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCGGGCAATAATCGGATaGTGTAATTCGTGCCGGACC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHRAIIG*CNSCRT
Trigger: GGTCCGGCACGAATTACAGCATCCGATTATTGCCCG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGGTCAATCTCCACATTaGCCAAATTATCCGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSGQSPH*PNYPQS
Trigger: ACTTTGCGGATAATTTGGGCAATGTGGAGATTGACC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGCCCCAGAGGTCCGCTaGCATCAGGATCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRAPEVR*HQDLSS
Trigger: ACTGGATAGATCCTGATGGCAGCGGACCTCTGGGGC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTGCAGTTGCGTTCGATaGCGCAGGCACATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQCSCVR*RRHISG
Trigger: TCCAGAAATGTGCCTGCGGCATCGAACGCAACTGCA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTCTGCAGTGACCCGGTaGCACTGGTCATCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSAVTR*HWSSLR
Trigger: TCTCAACGATGACCAGTGGCACCGGGTCACTGCAGA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCTTGACATTCCTCTCTaGAGTGACCCGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLDIPL*SDPVPL
Trigger: CAGTGGCACCGGGTCACTGCAGAGAGGAATGTCAAG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTTGTTCCATAGCTGGTaGAATGGCCCGAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLFHSW*NGPSIR
Trigger: CCGGATGCTCGGGCCATTGCACCAGCTATGGAACAA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGTCTCTGGCATTTGTTaGTGGTGCCTGAAAGTTATA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSVSGIC*WCLKVI
Trigger: TATAACTTTCAGGCACCAGCAACAAATGCCAGAGAC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCGACTCCGCCCCCTTTaGTTCGTTGGTATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSRLRPL*FVGMVG
Trigger: ACCTACCATACCAACGAAGCAAAGGGGGCGGAGTCG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGAGTATGAAGCAGGGTaGTTTTGTCCCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLEYEAG*FCPFLS
Trigger: GGAGAGAAAGGGACAAAAGCACCCTGCTTCATACTC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGTCAGGAACCCCAGATaGCAGAGAGCTGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQVRNPR*QRAGID
Trigger: ATCTATGCCAGCTCTCTGGCATCTGGGGTTCCTGAC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAGACTCTTTGGCTCATaGCAATGCTTTTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSRLFGS*QCFFLC
Trigger: GCACAAGAAAAAGCATTGGCATGAGCCAAAGAGTCT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGCCCAGCTCTCAGCCTaGATATGGTGGCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFAQLSA*IWWPLS
Trigger: GCTGAGCGGCCACCATATGCAGGCTGAGAGCTGGGC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCACAACCTGAACACTTaGATGTTCAAGTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLHNLNT*MFKSHS
Trigger: GCTGTGGGACTTGAACATGCAAGTGTTCAGGTTGTG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCCGAGATTGCGCCAGTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFPRLRQ*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCACTGGCGCAATCTCGG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCTTCCTGGTCCCTGTaGATCCAGGTGGAGACATGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPSWSL*IQVETC
Trigger: ACATGTCTCCACCTGGATGCACAGGGACCAGGAAGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628930.2
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTACCCAGCCAGTAACTaGCTTCCTGGTCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSYPASN*LPGPCA
Trigger: TGCACAGGGACCAGGAAGGCAGTTACTGGCTGGGTA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628930.2
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTCACTCCCGCAAAGCTaGTACCCAGCCAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSLPQS*YPASNC
Trigger: GCAGTTACTGGCTGGGTAGCAGCTTTGCGGGAGTGA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628930.2
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCTGCTGAAAGCCACATaGGGGAGTCCAGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHLLKAT*GSPETS
Trigger: ACTTGTCTCTGGACTCCCCCATGTGGCTTTCAGCAG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGTAGGAGGATGGGTTTaGGAAAGAGGCGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHVGGWV*ERGGIP
Trigger: TGGAATGCCGCCTCTTTCCCAAACCCATCCTCCTAC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTGCTGCTGGAGTCTCTaGCATTTGTTGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHCCWSL*HLLLVP
Trigger: AGGCACCAGCAACAAATGCCAGAGACTCCAGCAGCA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTGTGCCAGGTCCGGGTaGGAGTTCTGCTGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSCARSG*EFCWSG
Trigger: TCCCGACCAGCAGAACTCCCACCCGGACCTGGCACA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTGTGGGGCTGTCCATTaGCCATGTTCCTGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQCGAVH*PCSCGL
Trigger: TAGACCACAGGAACATGGCCAATGGACAGCCCCACA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGTGATGTTGACACTGTaGGGCTGTCCATTGGCCATG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHVMLTL*GCPLAM
Trigger: CATGGCCAATGGACAGCCCCACAGTGTCAACATCAC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGCAACCAGTGAATCCTaGGGTGTTGTATTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSATSES*GVVFVN
Trigger: ATTCACAAATACAACACCCCAGGATTCACTGGTTGC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGCGATCTGGTTGAACTaGACTCTGGAGAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQAIWLN*TLERQP
Trigger: TGGTTGCCTCTCCAGAGTCCAGTTCAACCAGATCGC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGCGATCTGGTTGAACTaGACTCTGGAGAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHAIWLN*TLERQP
Trigger: TGGTTGCCTCTCCAGAGTCCAGTTCAACCAGATCGC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCCCCCTTTGCTTCGTTaGTATGGTAGGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHPPLLR*YGRCPC
Trigger: ACAAGGGCACCTACCATACCAACGAAGCAAAGGGGG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCACTTCTCCATCCTCTaGGAAGCAACAGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHHFSIL*EATGTR
Trigger: CCTGGTACCTGTTGCTTCCCAGAGGATGGAGAAGTG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGCTTTTTCAACCTCCTaGACCAGCTTTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLAFSTS*TSFLEL
Trigger: GAGCTCAAGAAAGCTGGTCCAGGAGGTTGAAAAAGC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATTAAGACAGACTCTTTaGCTCATGCCAATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLRQTL*LMPMLF
Trigger: AAAAAGCATTGGCATGAGCCAAAGAGTCTGTCTTAA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATTTAGGACCTATCTTTaGCTGGCTTACTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATFRTYL*LAYLNS
Trigger: TGAATTCAAGTAAGCCAGCCAAAGATAGGTCCTAAA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGGGGGTAGGAGCCATTaGTTCTTAGCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQGGRSH*FLAEVS
Trigger: GCTGACTTCAGCTAAGAACCAATGGCTCCTACCCCC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTTTGCAAGGCCGAGGTaGACGGATCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQFARPR*TDHLRS
Trigger: TGACCTCAAGTGATCCGTCCACCTCGGCCTTGCAAA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTTTGCAAGGCCGAGGTaGACGGATCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHFARPR*TDHLRS
Trigger: TGACCTCAAGTGATCCGTCCACCTCGGCCTTGCAAA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAAATTAACTGAGACTTaGAAATGGTGCAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATKLTET*KWCRLS
Trigger: AGACAGTCTGCACCATTTCCAAGTCTCAGTTAATTT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCACACATGTCAATGCTaGCATTCGCGAAACTTCCCG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHHTCQC*HSRNFP
Trigger: CGGGAAGTTTCGCGAATGTCAGCATTGACATGTGTG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAGCTTCCAGTGGGTTTaGCGAGGACTGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSFQWV*RGLPRS
Trigger: ACTTCTTGGCAGTCCTCGTCAAACCCACTGGAAGCT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGAAGAGGGTGTCGGATaGACTTGGCAGATGGTAACT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQEEGVG*TWQMVT
Trigger: AGTTACCATCTGCCAAGTTCATCCGACACCCTCTTC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTGGAGAGGCAACCAGTaGATCCTGGGGTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQWRGNQ*ILGCCI
Trigger: AATACAACACCCCAGGATTCACTGGTTGCCTCTCCA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTCCCCCAACTTGTGCTaGTATTTTAAGGATGTGCTC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLSPNLC*YFKDVL
Trigger: GAGCACATCCTTAAAATATCAGCACAAGTTGGGGGA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGCCACCAACTTTCCCTaGAACTTTAAAACAGTCTAT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSATNFP*NFKTVY
Trigger: ATAGACTGTTTTAAAGTTTCAGGGAAAGTTGGTGGC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCCATTGGTTCTTAGCTaGAGTCAGCTGGGGACATTG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHPLVLS*SQLGTL
Trigger: CAATGTCCCCAGCTGACTTCAGCTAAGAACCAATGG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAAAAGTTCGAGGACTTaGCCAAGGTCACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHKSSRT*PRSHRE
Trigger: CTCCCTGTGTGACCTTGGTCAAGTCCTCGAACTTTT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGAAAAGTTCGAGGACTTaGCCAAGGTCACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQKSSRT*PRSHRE
Trigger: CTCCCTGTGTGACCTTGGTCAAGTCCTCGAACTTTT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGTGCCCCTCGCTTTGTaGTGCAGGTGGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSVPLAL*CRWLSH
Trigger: GTGGGAAAGCCACCTGCATCACAAAGCGAGGGGCAC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGTGCCCCTCGCTTTGTaGTGCAGGTGGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFVPLAL*CRWLSH
Trigger: GTGGGAAAGCCACCTGCATCACAAAGCGAGGGGCAC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGAAGCTGTCCCATGTTTaGGAGCACTTTCCACCATGC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQKLSHV*EHFPPC
Trigger: GCATGGTGGAAAGTGCTCGCAAACATGGGACAGCTT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTACCTGTAGGCTGGCCTaGTTGACATTCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSTCRLA*LTFLSA
Trigger: TGCAGAGAGGAATGTCAAGCAGGCCAGCCTACAGGT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCTTCTGTTGGGGCCTTaGGGATCTGCTGCGGTAGCC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLLLGP*GSAAVA
Trigger: GGCTACCGCAGCAGATCCGCAAGGCCCCAACAGAAG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGAGCGTTGTCTACTCTaGTGCTGGAGTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSERCLL*CWSLWH
Trigger: ATGCCAGAGACTCCAGCAGCAGAGTAGACAACGCTC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTCCGGGTGGGAGTTCTaGTGGTCGGGAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFSGWEF*WSGALS
Trigger: AGACAACGCTCCCGACCAGCAGAACTCCCACCCGGA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGTATGGCTCTCGGGTaGCACCCAGGTTGTATCGAA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSCMALG*HPGCIE
Trigger: TTCGATACAACCTGGGTGGCACCCGAGAGCCATACA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGCCGAGGCGTTTGTCTaGCTCAAGGCGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFAEAFV*LKAALR
Trigger: TCTCAAGGCCGCCTTGAGGCAGACAAACGCCTCGGC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCGTTGGTATGGTAGGTaGCCTTGTGGCGGAACATGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSRWYGR*PCGGTC
Trigger: ACATGTTCCGCCACAAGGGCACCTACCATACCAACG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGTCAGGAACCCCAGATaGCAGAGAGCTGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSVRNPR*QRAGID
Trigger: ATCTATGCCAGCTCTCTGGCATCTGGGGTTCCTGAC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTCGTTACACACCAGGTaGCATGCACTCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQSLHTR*HALSSF
Trigger: GAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCATGGTTATGGAGGCTaGACTGTGCTAGGCTATCCA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQHGYGG*TVLGYP
Trigger: TGGATAGCCTAGCACAGTGCAGCCTCCATAACCATG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCATGGTTATGGAGGCTaGACTGTGCTAGGCTATCCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHHGYGG*TVLGYP
Trigger: TGGATAGCCTAGCACAGTGCAGCCTCCATAACCATG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTGCTTGTTCCTGAAGTaGTTCCAATGGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQCLFLK*FQWLRL
Trigger: CAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGAGTCCCACAGCTGTGTaGTTGTTCCTGAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQSPTAV*LFLKCF
Trigger: GAAGCACTTCAGGAACAAGCACACAGCTGTGGGACT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGGAGGAGGAGGAGGTTaGAGTGAGCCCGAGATTGCG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSGGGGG*SEPEIA
Trigger: CGCAATCTCGGGCTCACTGCAACCTCCTCCTCCTCC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGAGAGAGAAAGGGGATaGTGTCAGCTAATTCTCATG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLERERG*CQLILM
Trigger: CATGAGAATTAGCTGACAGCATCCCCTTTCTCTCTC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAATGTACTTTAAAGTTTaGAGCACTACCATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSMYFKV*STTMQG
Trigger: ACCCTGCATGGTAGTGCTGCAAACTTTAAAGTACAT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATCCGAAAGCAGCAGTTaGTGTAAATTAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSSESSS*CKLTET
Trigger: AGTCTCAGTTAATTTACAGCAACTGCTGCTTTCGGA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATTAATGCTCCGCCCCTaGCGCTCAATGACCACAGAG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLMLRP*RSMTTE
Trigger: CTCTGTGGTCATTGAGCGCCAGGGGCGGAGCATTAA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGCGCTAGTTTCCCCTTaGAAAGTAGAGAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQALVSP*KVEKCR
Trigger: CCTGCACTTCTCTACTTTCCAAGGGGAAACTAGCGC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAGTTTGTTCCATAGCTaGTGCAATGGCCCGAGCATC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSLFHS*CNGPSI
Trigger: GATGCTCGGGCCATTGCACCAGCTATGGAACAAACT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGCTGCTGGAGTCTCTaGCATTTGTTGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSCCWSL*HLLLVP
Trigger: AGGCACCAGCAACAAATGCCAGAGACTCCAGCAGCA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATTGGCCATGTTCCTGTaGTCTACGTCAATATTGTAT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSLAMFL*STSILY
Trigger: ATACAATATTGACGTAGACCACAGGAACATGGCCAA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGTGGGGCTGTCCATTaGCCATGTTCCTGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSCGAVH*PCSCGL
Trigger: TAGACCACAGGAACATGGCCAATGGACAGCCCCACA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGTGATGTTGACACTGTaGGGCTGTCCATTGGCCATG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSVMLTL*GCPLAM
Trigger: CATGGCCAATGGACAGCCCCACAGTGTCAACATCAC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCGATCTGGTTGAACTaGACTCTGGAGAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSAIWLN*TLERQP
Trigger: TGGTTGCCTCTCCAGAGTCCAGTTCAACCAGATCGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTTGAGAGGGGCGATCTaGTTGAACTGGACTCTGGAG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLRGAI*LNWTLE
Trigger: CTCCAGAGTCCAGTTCAACCAGATCGCCCCTCTCAA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCCCCTTTGCTTCGTTaGTATGGTAGGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPPLLR*YGRCPC
Trigger: ACAAGGGCACCTACCATACCAACGAAGCAAAGGGGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCAGATGCCAGAGAGCTaGCATAGATTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQQMPES*HRLSSA
Trigger: AGCAGAGCTCAATCTATGCCAGCTCTCTGGCATCTG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGTCCAATGTCTCCTTTaGAATGTGCTCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLVQCLL*NVLCTG
Trigger: ACCAGTACAGAGCACATTCCAAAGGAGACATTGGAC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATGTATGGGAATTAACTaGTCCAATGTCTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSCMGIN*SNVSFG
Trigger: TCCAAAGGAGACATTGGACCAGTTAATTCCCATACA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGGAATGTCATGGTTATaGAGGCTGCACTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQGMSWL*RLHCAR
Trigger: CCTAGCACAGTGCAGCCTCCATAACCATGACATTCC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGGGCGGGAATGTCATaGTTATGGAGGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSWAGMS*LWRLHC
Trigger: ACAGTGCAGCCTCCATAACCATGACATTCCCGCCCA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCTCTCAGCCTGCATATaGTGGCCGCTCAGCAGATTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLSACI*WPLSRF
Trigger: AAATCTGCTGAGCGGCCACCATATGCAGGCTGAGAG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCTGTTTGTTTCGCACTaGTTTAGGATCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLLFVSH*FRIRWF
Trigger: GAACCACCTGATCCTAAACCAGTGCGAAACAAACAG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGGGGTAGGAGCCATTaGTTCTTAGCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGGRSH*FLAEVS
Trigger: GCTGACTTCAGCTAAGAACCAATGGCTCCTACCCCC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGTTTGTATTTTGTGTTaGCCTATGTATAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATVCILC*PMYKPI
Trigger: GATTGGCTTATACATAGGCCAACACAAAATACAAAC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAAGGTGGCTTTCCCACTaGCCGGGTCAGACTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRRWLSH*PGQTSE
Trigger: TTCTGAAGTCTGACCCGGCCAGTGGGAAAGCCACCT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCCTGTGCATCCAGGTaGAGACATGTGACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPCASR*RHVTSS
Trigger: AGAGCTAGTCACATGTCTCCACCTGGATGCACAGGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628930.2
3UTR CAA 72 bp GAAGGAAAGAAAAGCTTCTTGACACAACCTGAACACTaGCATGTTCAAGTCCCACAGCTGTGTGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: EGKKSFLTQPEH*HVQVPQLCACS
Trigger: GGAACAAGCACACAGCTGTGGGACTTGAACATGCAAGTGTTCAGGTTGTGTCAAGAAGCTTTTCTTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGACTTCCTGTCATCACTaGTGTGTGGCCATATATGGG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQTSCHH*CVAIYG
Trigger: CCCATATATGGCCACACATCAGTGATGACAGGAAGT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTAACGAGCTGTGTCACTaGGTATTTTTCTGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLNELCH*VFFWVV
Trigger: TACAACCCAGAAAAATACTCAGTGACACAGCTCGTT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAACTCGGCACTGTCAGTaGTGGCACTTATCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRTRHCQ*WHLSGP
Trigger: TGGACCAGATAAGTGCCATCACTGACAGTGCCGAGT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGTTGAGAGGGGTTGGTaGCCTCACTACAATCTCTAC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSVERGW*PHYNLY
Trigger: GTAGAGATTGTAGTGAGGTCACCAACCCCTCTCAAC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGAAGAGGGTGTCGGATaGACTTGGCAGATGGTAACT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSEEGVG*TWQMVT
Trigger: AGTTACCATCTGCCAAGTTCATCCGACACCCTCTTC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGGAGAGGCAACCAGTaGATCCTGGGGTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSWRGNQ*ILGCCI
Trigger: AATACAACACCCCAGGATTCACTGGTTGCCTCTCCA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACATGTGCTCAAGAGTATaGAGCAGGGTGCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHMCSRV*SRVLLS
Trigger: GGACAAAAGCACCCTGCTTCATACTCTTGAGCACAT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTCTCTCCAGTTGTGCTaGTTGTGTCGTTACACACCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSLQLC*LCRYTP
Trigger: TGGTGTGTAACGACACAATCAGCACAACTGGAGAGA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAACACGTGGAGTAGTTaGTTTAAAATATGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSNTWSS*FKIWQC
Trigger: ACACTGCCATATTTTAAATCAACTACTCCACGTGTT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGTTTGGTTTCCTGTCTaGTGGCCACATTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHVWFPV*WPHCNP
Trigger: AGGGTTACAATGTGGCCATCAGACAGGAAACCAAAC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCTGTGTGCTTGTTCCTaGAGTGCTTCCAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLCACS*SASNGF
Trigger: GAAGCCATTGGAAGCACTTCAGGAACAAGCACACAG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGAAAGAAAAGCTTCTTaGCACAACCTGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLERKAS*HNLNTC
Trigger: GCAAGTGTTCAGGTTGTGTCAAGAAGCTTTTCTTTC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTGCATCTCCCAGTGTTaGCAGGTTAGTCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHCISQC*QVSLHD
Trigger: ATCATGCAGACTAACCTGTCAACACTGGGAGATGCA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGTCTCTGGCATTTGTTaGTGGTGCCTGAAAGTTATA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLVSGIC*WCLKVI
Trigger: TATAACTTTCAGGCACCAGCAACAAATGCCAGAGAC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCGTTGTCTACTCTGCTaGTGGAGTCTCTGGCATTTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSRCLLC*WSLWHL
Trigger: CAAATGCCAGAGACTCCAGCAGCAGAGTAGACAACG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGGTTTGACGAGGACTaGCAAGAAGTCTGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGFDED*QEVCGE
Trigger: TTCACCACAGACTTCTTGGCAGTCCTCGTCAAACCC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACGTTGGTATGGTAGGTaGCCTTGTGGCGGAACATGT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRRWYGR*PCGGTC
Trigger: ACATGTTCCGCCACAAGGGCACCTACCATACCAACG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGAGTATGAAGCAGGGTaGTTTTGTCCCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHEYEAG*FCPFLS
Trigger: GGAGAGAAAGGGACAAAAGCACCCTGCTTCATACTC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGAGTATGAAGCAGGGTaGTTTTGTCCCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQEYEAG*FCPFLS
Trigger: GGAGAGAAAGGGACAAAAGCACCCTGCTTCATACTC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTTATATTCCATTGCCTaGCTCCCCCAACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHLYSIA*LPQLVL
Trigger: CAGCACAAGTTGGGGGAGGCAGGCAATGGAATATAA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCTCTCTTCCTTCAACTaGTGGTATCAGTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHLSSFN*WYQSGT
Trigger: GGTTCCTGACTGATACCAGCAGTTGAAGGAAGAGAG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTACACACCAGGTGCCATaGACTCTCTTCCTTCAACTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSTHQVP*TLFLQL
Trigger: CAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAGAACCACTGATCCCTaGAGTCATTCCAGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHRTTDP*SHSSVL
Trigger: TAGGACACTGGAATGACTGCAGGGATCAGTGGTTCT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACTACCAGCATACTTGTaGTTGCTTGATAATGTATTG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSLPAYL*LLDNVL
Trigger: CAATACATTATCAAGCAAGCACAAGTATGCTGGTAG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCACAACCTGAACACTTaGATGTTCAAGTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHHNLNT*MFKSHS
Trigger: GCTGTGGGACTTGAACATGCAAGTGTTCAGGTTGTG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCACAACCTGAACACTTaGATGTTCAAGTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQHNLNT*MFKSHS
Trigger: GCTGTGGGACTTGAACATGCAAGTGTTCAGGTTGTG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCACATTTTTGGGACGTaGAGGGAGCCGTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSHIFGT*REPSRL
Trigger: GAGCCTGGACGGCTCCCTCCACGTCCCAAAAATGTG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTATGTGTGGCCATATATaGGGCCAAGCTGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSMCGHI*GQAGCF
Trigger: GAAGCAACCAGCTTGGCCCCATATATGGCCACACAT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCCGCAGGCACATTTCTaGATTCCAGGCCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFPQAHF*IPGPEP
Trigger: AGGCTCTGGGCCTGGAATCCAGAAATGTGCCTGCGG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAGTTTGTTCCATAGCTaGTGCAATGGCCCGAGCATC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSLFHS*CNGPSI
Trigger: GATGCTCGGGCCATTGCACCAGCTATGGAACAAACT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTACGTCAATATTGTATaGCTCTCGGGTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSYVNIV*LSGATQ
Trigger: CTGGGTGGCACCCGAGAGCCATACAATATTGACGTA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAAGATGGTCTTCTCGTaGCGGGTGATGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSKMVFS*RVMLTL
Trigger: CAGTGTCAACATCACCCGCCACGAGAAGACCATCTT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATTGAGAGGGGCGATCTaGTTGAACTGGACTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLRGAI*LNWTLE
Trigger: CTCCAGAGTCCAGTTCAACCAGATCGCCCCTCTCAA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAAAGGAAGAGAATGTTaGGGGCCATCTGTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHKGREC*GPSVGA
Trigger: TGCACCTACAGATGGCCCCCAACATTCTCTTCCTTT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTCTTCCTTCAACTGCTaGTATCAGTCAGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSSFNC*YQSGTP
Trigger: TGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGATAGTTACAGCTATTaGTCTAAGACTACATACGTG +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSDSYSY*SKTTYV
Trigger: CACGTATGTAGTCTTAGACCAATAGCTGTAACTATC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTATCTTTTGTAACAGCTaGTCACCATGGTATTGCAGC +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLIFCNS*SPWYCS
Trigger: GCTGCAATACCATGGTGACCAGCTGTTACAAAAGAT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATGGGCGGGAATGTCATaGTTATGGAGGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRWAGMS*LWRLHC
Trigger: ACAGTGCAGCCTCCATAACCATGACATTCCCGCCCA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACTCTCAGCCTGCATATaGTGGCCGCTCAGCAGATTT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLSACI*WPLSRF
Trigger: AAATCTGCTGAGCGGCCACCATATGCAGGCTGAGAG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CAA 72 bp TTCTTAGCTGAAGTCAGCTGGGGACATTGTTACTGTTaGTTTCGCACTGGTTTAGGATCAGGTGGTTCTACT +
Preference number: 4 (lower is better)
Translates to: FLAEVSWGHCYC*FRTGLGSGGST
Trigger: AGTAGAACCACCTGATCCTAAACCAGTGCGAAACAAACAGTAACAATGTCCCCAGCTGACTTCAGCTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGAAATTATCCGCAAAGTaGCTGAAGACCAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQKLSAK*LKTRRP
Trigger: TGGTCTCCTGGTCTTCAGTCACTTTGCGGATAATTT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCACTTTGCTTTCAGTaGGGTCAATCTCCACATTGC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPLCFQ*GQSPHC
Trigger: GCAATGTGGAGATTGACCTCACTGAAAGCAAAGTGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGTTGAGAGGGGTTGGTaGCCTCACTACAATCTCTAC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRVERGW*PHYNLY
Trigger: GTAGAGATTGTAGTGAGGTCACCAACCCCTCTCAAC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATGGAGAGGCAACCAGTaGATCCTGGGGTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRWRGNQ*ILGCCI
Trigger: AATACAACACCCCAGGATTCACTGGTTGCCTCTCCA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCATCAATGGTCTCTGTaGAGTTGGGGTCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSHQWSL*SWGRCS
Trigger: TGAACAACGACCCCAACTTCACAGAGACCATTGATG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTATGTGCTCAAGAGTATaGAGCAGGGTGCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSMCSRV*SRVLLS
Trigger: GGACAAAAGCACCCTGCTTCATACTCTTGAGCACAT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGAGAGCTGGCATAGATTaGGCTCTGCTTAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQRAGID*ALLKNW
Trigger: CCAGTTTTTAAGCAGAGCTCAATCTATGCCAGCTCT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGCCACCAACTTTCCCTaGAACTTTAAAACAGTCTAT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLATNFP*NFKTVY
Trigger: ATAGACTGTTTTAAAGTTTCAGGGAAAGTTGGTGGC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGGGAATATGCTATTTTaGGAGCTTAGGATCTCACTA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLGNMLF*ELRISL
Trigger: TAGTGAGATCCTAAGCTCTCAAAATAGCATATTCCC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACTGTGTGCTTGTTCCTaGAGTGCTTCCAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLCACS*SASNGF
Trigger: GAAGCCATTGGAAGCACTTCAGGAACAAGCACACAG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTGTTGTTTGGAGGCATaGGACATAAACGGGCCATTA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQCCLEA*DINGPL
Trigger: TAATGGCCCGTTTATGTCTCATGCCTCCAAACAACA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAAAAAGTTCGAGGACTTaGCCAAGGTCACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRKSSRT*PRSHRE
Trigger: CTCCCTGTGTGACCTTGGTCAAGTCCTCGAACTTTT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGCATCTCCCAGTGTTaGCAGGTTAGTCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSCISQC*QVSLHD
Trigger: ATCATGCAGACTAACCTGTCAACACTGGGAGATGCA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTGTCCTCTGTCATGTTaGAGTAAACTTTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQCPLSC*SKLSEA
Trigger: GGCCTCTGAAAGTTTACTGCAACATGACAGAGGACA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGCTTCTCGTTGGCTTTaGCAACCCACCAAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRASRWL*QPTKCK
Trigger: CTTACACTTGGTGGGTTGGCAAAGCCAACGAGAAGC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCGACTCCGCCCCCTTTaGTTCGTTGGTATGGTAGGT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFRLRPL*FVGMVG
Trigger: ACCTACCATACCAACGAAGCAAAGGGGGCGGAGTCG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGAGTATGAAGCAGGGTaGTTTTGTCCCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSEYEAG*FCPFLS
Trigger: GGAGAGAAAGGGACAAAAGCACCCTGCTTCATACTC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTTATATTCCATTGCCTaGCTCCCCCAACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLYSIA*LPQLVL
Trigger: CAGCACAAGTTGGGGGAGGCAGGCAATGGAATATAA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGGGGCCATCTGTAGGTaGATTAGCTTTTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHGAICR*ISFSQE
Trigger: TTCTTGAGAAAAGCTAATGCACCTACAGATGGCCCC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAAAGTGTTGAGACAATaGATAAAGAACAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSKVLRQ*IKNRAI
Trigger: GATAGCTCTGTTCTTTATGCATTGTCTCAACACTTT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAGAACCACTGATCCCTaGAGTCATTCCAGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSRTTDP*SHSSVL
Trigger: TAGGACACTGGAATGACTGCAGGGATCAGTGGTTCT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACAAAACATCGACATTTaGTTCATACACAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSQNIDI*FIHRRC
Trigger: ACATCTTCTGTGTATGAAGCAAATGTCGATGTTTTG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTGCTTGTTTGTCAAATaGAGGGCAGTAGGACATTTT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLCLFVK*RAVGHF
Trigger: AAAATGTCCTACTGCCCTGCATTTGACAAACAAGCA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGTCATCACTGATGTGTaGCCATATATGGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRVITDV*PYMGPS
Trigger: GCTTGGCCCCATATATGGCCACACATCAGTGATGAC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAACAGAGTGCCAGTGGTaGTCATCCAGCAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRTECQW*SSSKLP
Trigger: AGGAAGTTTGCTGGATGACCACCACTGGCACTCTGT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAGTCAAACTCTCCATTaGTACGGAAGTGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSQTLH*YGSAAC
Trigger: GCATGCAGCACTTCCGTACCAATGGAGAGTTTGACT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAATTCTTTCTACTGCTaGAGCTGGGCTTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSNSFYC*SWACQR
Trigger: TCTCTGGCAAGCCCAGCTCCAGCAGTAGAAAGAATT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACTTGAGTTATTCATCTaGTTCAGAAAACCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSLELFI*FRKPPK
Trigger: TTTTGGAGGTTTTCTGAACCAGATGAATAACTCAAG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAGTCATGAGACACTATaGTCCACACTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSHETL*STLCPL
Trigger: CAGAGGACAAAGTGTGGACCATAGTGTCTCATGACT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAAGTAGTGCTTCTCGTTaGCTTTGCCAACCCACCAAG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSSASR*LCQPTK
Trigger: CTTGGTGGGTTGGCAAAGCCAACGAGAAGCACTACT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTTGGCCATGTTCCTGTaGTCTACGTCAATATTGTAT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLLAMFL*STSILY
Trigger: ATACAATATTGACGTAGACCACAGGAACATGGCCAA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCAGCCTGCATATGGTaGCCGCTCAGCAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSACIW*PLSRFS
Trigger: TGAAAATCTGCTGAGCGGCCACCATATGCAGGCTGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCTGAAGTGCTTCCAATaGCTTCGCCTGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFLKCFQ*LRLCPA
Trigger: AGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAGTTTGTATTTTGTGTTaGCCTATGTATAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSVCILC*PMYKPI
Trigger: GATTGGCTTATACATAGGCCAACACAAAATACAAAC...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CAA 72 bp GCCAATGCTTTTTCTTGTGCCTCTGAATTCCTGCTCTaGTTAGTAAAGGATGCTTGTTTGTCAAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: ANAFSCASEFLL*LVKDACLSNAG
Trigger: CCCTGCATTTGACAAACAAGCATCCTTTACTAACAAGAGCAGGAATTCAGAGGCACAAGAAAAAGCATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTCGCCAGTTTTAACTTaGAGGGGACTATTAGTTCGA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSPVLT*RGLLVR
Trigger: TCGAACTAATAGTCCCCTTCAAGTTAAAACTGGCGA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTTGGCTTCTGAGCCTTaGCGGTCAGTATCTCCAACC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFLASEP*RSVSPT
Trigger: GGTTGGAGATACTGACCGTCAAGGCTCAGAAGCCAA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTTTGTTGCTGGTGCCTaGAAGTTATATCGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSFVAGA*KLYRSH
Trigger: GTGGCTACGATATAACTTTCAGGCACCAGCAACAAA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACATCAATGGTCTCTGTaGAGTTGGGGTCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRHQWSL*SWGRCS
Trigger: TGAACAACGACCCCAACTTCACAGAGACCATTGATG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTCCCCCAACTTGTGCTaGTATTTTAAGGATGTGCTC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSPNLC*YFKDVL
Trigger: GAGCACATCCTTAAAATATCAGCACAAGTTGGGGGA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGTCCATGACAGTGCCTaGGCTCAACCAGCAATGGTA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFVHDSA*AQPAMV
Trigger: TACCATTGCTGGTTGAGCTCAGGCACTGTCATGGAC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGATGTCAAGATTTTGTaGGATGTGAATGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLDVKIL*DVNDKA
Trigger: TGCTTTGTCATTCACATCTCACAAAATCTTGACATC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGAAAGAAAAGCTTCTTaGCACAACCTGAACACTTGC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHERKAS*HNLNTC
Trigger: GCAAGTGTTCAGGTTGTGTCAAGAAGCTTTTCTTTC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATGCATCTCCCAGTGTTaGCAGGTTAGTCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRCISQC*QVSLHD
Trigger: ATCATGCAGACTAACCTGTCAACACTGGGAGATGCA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGCAATGGCACTGATCTaGTTCCGATTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRAMALI*FRLPKS
Trigger: TGACTTTGGCAATCGGAAGCAGATCAGTGCCATTGC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTACCTGTAGGCTGGCCTaGTTGACATTCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSTCRLA*LTFLSA
Trigger: TGCAGAGAGGAATGTCAAGCAGGCCAGCCTACAGGT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGAGCGTTGTCTACTCTaGTGCTGGAGTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSERCLL*CWSLWH
Trigger: ATGCCAGAGACTCCAGCAGCAGAGTAGACAACGCTC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCGTTGGTATGGTAGGTaGCCTTGTGGCGGAACATGT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFRWYGR*PCGGTC
Trigger: ACATGTTCCGCCACAAGGGCACCTACCATACCAACG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTCCATTATATTCCATTaGCTGCCTCCCCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSIIFH*LPPPTC
Trigger: ACAAGTTGGGGGAGGCAGGCAATGGAATATAATGGA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCCCAAGAAACTGATGTaGTCCAATAAGTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQPKKLM*SNKLGT
Trigger: TGTGCCTAACTTATTGGAGCACATCAGTTTCTTGGG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCTACCAGCATACTTGTaGTTGCTTGATAATGTATTG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLLPAYL*LLDNVL
Trigger: CAATACATTATCAAGCAAGCACAAGTATGCTGGTAG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGAGAGAGAAAGGGGATaGTGTCAGCTAATTCTCATG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSERERG*CQLILM
Trigger: CATGAGAATTAGCTGACAGCATCCCCTTTCTCTCTC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGGTTTCAAGGTATTTTaGAGTCAAGAATCAATGGCA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLGFKVF*SQESMA
Trigger: TGCCATTGATTCTTGACTGCAAAATACCTTGAAACC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTATTTTTATTATCTCCTaGCAGTCTTTGCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLIFIIS*QSLLNG
Trigger: CCCATTGAGCAAAGACTGGCAGGAGATAATAAAAAT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACTGCTATACCTTCCTTaGGTTGCAATGGCACTGATC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLLYLP*VAMALI
Trigger: GATCAGTGCCATTGCAACCCAAGGAAGGTATAGCAG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTTCCATGTCCTAAACTaGAAACTGACTGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHFHVLN*KLTENR
Trigger: CCTGTTCTCAGTCAGTTTCCAGTTTAGGACATGGAA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGCAACCAGTGAATCCTaGGGTGTTGTATTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHATSES*GVVFVN
Trigger: ATTCACAAATACAACACCCCAGGATTCACTGGTTGC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTTGAGAGGGGCGATCTaGTTGAACTGGACTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLRGAI*LNWTLE
Trigger: CTCCAGAGTCCAGTTCAACCAGATCGCCCCTCTCAA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCCATTTCTTATAGCTTaGCCTTGTCCTGGATTATAT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLPFLIA*PCPGLY
Trigger: ATATAATCCAGGACAAGGCCAAGCTATAAGAAATGG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCCCCCTTTGCTTCGTTaGTATGGTAGGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFPPLLR*YGRCPC
Trigger: ACAAGGGCACCTACCATACCAACGAAGCAAAGGGGG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCTTCCTTCAACTGCTaGTATCAGTCAGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSSFNC*YQSGTP
Trigger: TGGGGTTCCTGACTGATACCAGCAGTTGAAGGAAGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGATAGTTACAGCTATTaGTCTAAGACTACATACGTG +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLDSYSY*SKTTYV
Trigger: CACGTATGTAGTCTTAGACCAATAGCTGTAACTATC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTCACAGCAGTGTGATTaGATGGAAAAACACGTGGAG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSQQCD*MEKHVE
Trigger: CTCCACGTGTTTTTCCATCCAATCACACTGCTGTGA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTTGAATTCCTCAGAATaGTGGGATCTCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLLNSSE*WDLKTF
Trigger: AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTTTAGGACCTATCTTTaGCTGGCTTACTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLFRTYL*LAYLNS
Trigger: TGAATTCAAGTAAGCCAGCCAAAGATAGGTCCTAAA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTAGAATCGCCTCAATGTaGGAGGAGGAGGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFRIASM*EEEEVA
Trigger: TGCAACCTCCTCCTCCTCCCACATTGAGGCGATTCT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTTTGCAAGGCCGAGGTaGACGGATCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSFARPR*TDHLRS
Trigger: TGACCTCAAGTGATCCGTCCACCTCGGCCTTGCAAA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCAGTCTTTGCTCAATaGGAGATGACAGACCAACTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPVFAQ*EMTDQL
Trigger: AAGTTGGTCTGTCATCTCCCATTGAGCAAAGACTGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTTGGGTCACCCAATCTaGGCTGCTATACCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLGHPI*AAIPSL
Trigger: CAAGGAAGGTATAGCAGCTCAGATTGGGTGACCCAA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGGTGTTCAACAATCTTaGCATCTTGCAGAAATAGGA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHGVQQS*HLAEIG
Trigger: TCCTATTTCTGCAAGATGTCAAGATTGTTGAACACC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGGGGTGTTGTATTTGTaGATCTCTTGGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHGVLYL*ISWSIF
Trigger: GAAAATTGACCAAGAGATTCACAAATACAACACCCC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTGGAGAGGCAACCAGTaGATCCTGGGGTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFWRGNQ*ILGCCI
Trigger: AATACAACACCCCAGGATTCACTGGTTGCCTCTCCA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCCCCCAACTTGTGCTaGTATTTTAAGGATGTGCTC +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSPNLC*YFKDVL
Trigger: GAGCACATCCTTAAAATATCAGCACAAGTTGGGGGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGCCACCAACTTTCCCTaGAACTTTAAAACAGTCTAT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQATNFP*NFKTVY
Trigger: ATAGACTGTTTTAAAGTTTCAGGGAAAGTTGGTGGC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGGGAATATGCTATTTTaGGAGCTTAGGATCTCACTA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHGNMLF*ELRISL
Trigger: TAGTGAGATCCTAAGCTCTCAAAATAGCATATTCCC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCTGTGTGCTTGTTCCTaGAGTGCTTCCAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLCACS*SASNGF
Trigger: GAAGCCATTGGAAGCACTTCAGGAACAAGCACACAG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTAAAAGTTCGAGGACTTaGCCAAGGTCACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSKSSRT*PRSHRE
Trigger: CTCCCTGTGTGACCTTGGTCAAGTCCTCGAACTTTT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTTCACTAGGCTCCGTTaGCTTCAGTCTTTATATAAG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQFTRLR*LQSLYK
Trigger: CTTATATAAAGACTGAAGTCAACGGAGCCTAGTGAA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGATTTGTCTTTTGATGTaGCTTTCAACCACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQICLLM*LSTTSH
Trigger: GTGGCTTGTGGTTGAAAGTCACATCAAAAGACAAAT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGCCACATTTGTCTTTTaGTGTGACTTTCAACCACAA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHATFVF*CDFQPQ
Trigger: TTGTGGTTGAAAGTCACATCAAAAGACAAATGTGGC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACACCAACTTCTCAACGTaGTTTCCCCATTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHTNFST*FPHFIE
Trigger: TTCAATGAAATGGGGAAATCACGTTGAGAAGTTGGT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAATACCTTCCTTGGGTTaGAATGGCACTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRIPSLG*NGTDLL
Trigger: AAGCAGATCAGTGCCATTGCAACCCAAGGAAGGTAT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGATCTCTCTAGGCATTTaGCTCCATTTTCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQISLGI*LHFHSL
Trigger: CAAACTGTGAAAATGGAGGCAAATGCCTAGAGAGAT...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTAAATGTTCCATCATATaGAGTATTAGAGCAATCGCA +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLKCSII*SIRAIA
Trigger: TGCGATTGCTCTAATACTGCATATGATGGAACATTT...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGTCTCTGGCATTTGTTaGTGGTGCCTGAAAGTTATA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSVSGIC*WCLKVI
Trigger: TATAACTTTCAGGCACCAGCAACAAATGCCAGAGAC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGGGTTTGACGAGGACTaGCAAGAAGTCTGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFGFDED*QEVCGE
Trigger: TTCACCACAGACTTCTTGGCAGTCCTCGTCAAACCC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCCAAGAAACTGATGTaGTCCAATAAGTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPKKLM*SNKLGT
Trigger: TGTGCCTAACTTATTGGAGCACATCAGTTTCTTGGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCAAAACATCGACATTTaGTTCATACACAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLQNIDI*FIHRRC
Trigger: ACATCTTCTGTGTATGAAGCAAATGTCGATGTTTTG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTGCTTGTTTGTCAAATaGAGGGCAGTAGGACATTTT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHCLFVK*RAVGHF
Trigger: AAAATGTCCTACTGCCCTGCATTTGACAAACAAGCA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTGCTTGTTCCTGAAGTaGTTCCAATGGCTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSCLFLK*FQWLRL
Trigger: CAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTAGTCCCACAGCTGTGTaGTTGTTCCTGAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFSPTAV*LFLKCF
Trigger: GAAGCACTTCAGGAACAAGCACACAGCTGTGGGACT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACATGTACTTTAAAGTTTaGAGCACTACCATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHMYFKV*STTMQG
Trigger: ACCCTGCATGGTAGTGCTGCAAACTTTAAAGTACAT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTCCGAAAGCAGCAGTTaGTGTAAATTAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQSESSS*CKLTET
Trigger: AGTCTCAGTTAATTTACAGCAACTGCTGCTTTCGGA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTACCACAGAGTGCCAGTaGTGGTCATCCAGCAAACTT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFTTECQ*WSSSKL
Trigger: AAGTTTGCTGGATGACCACCACTGGCACTCTGTGGT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCACTACAATCTCTACTaGCCCATTTCCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSHYNLY*PISHIK
Trigger: TTTGATGTGGGAAATGGGCCAGTAGAGATTGTAGTG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTCTGGCATTTGTTGCTaGTGCCTGAAAGTTATATCG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSSGICC*CLKVIS
Trigger: CGATATAACTTTCAGGCACCAGCAACAAATGCCAGA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTAAGATGGTCTTCTCGTaGCGGGTGATGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSKMVFS*RVMLTL
Trigger: CAGTGTCAACATCACCCGCCACGAGAAGACCATCTT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCAACCAGTGAATCCTaGGGTGTTGTATTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSATSES*GVVFVN
Trigger: ATTCACAAATACAACACCCCAGGATTCACTGGTTGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCAGATGCCAGAGAGCTaGCATAGATTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSQMPES*HRLSSA
Trigger: AGCAGAGCTCAATCTATGCCAGCTCTCTGGCATCTG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTCAGCCTGCATATGGTaGCCGCTCAGCAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFSACIW*PLSRFS
Trigger: TGAAAATCTGCTGAGCGGCCACCATATGCAGGCTGA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTTAGCTGAAGTCAGCTaGGGACATTGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLAEVS*GHCYCL
Trigger: CAAACAGTAACAATGTCCCCAGCTGACTTCAGCTAA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACCAGTCTTTGCTCAATaGGAGATGACAGACCAACTT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRPVFAQ*EMTDQL
Trigger: AAGTTGGTCTGTCATCTCCCATTGAGCAAAGACTGG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTTCCTAAGTTTAAACTaGGGACCAGCTTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSFLSLN*GPAWLF
Trigger: AAAAAGCCAAGCTGGTCCTCAGTTTAAACTTAGGAA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGCACACATCTGTCTATaGTCGCACACATGTCAATGC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFAHICL*SHTCQC
Trigger: GCATTGACATGTGTGCGATCATAGACAGATGTGTGC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGGGTGTTGTATTTGTaGATCTCTTGGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGVLYL*ISWSIF
Trigger: GAAAATTGACCAAGAGATTCACAAATACAACACCCC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTCTCTCCAGTTGTGCTaGTTGTGTCGTTACACACCA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSSLQLC*LCRYTP
Trigger: TGGTGTGTAACGACACAATCAGCACAACTGGAGAGA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCTCTAATTCCCCATTaGGGCGCTTATACATATATA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSALIPH*GAYTYI
Trigger: TATATATGTATAAGCGCCTCAATGGGGAATTAGAGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGTTTGGTTTCCTGTCTaGTGGCCACATTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSVWFPV*WPHCNP
Trigger: AGGGTTACAATGTGGCCATCAGACAGGAAACCAAAC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGTTTGGTTTCCTGTCTaGTGGCCACATTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFVWFPV*WPHCNP
Trigger: AGGGTTACAATGTGGCCATCAGACAGGAAACCAAAC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCTGGACCAGCTTTCTTaGGCTCTAGGGAATATGCTA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLDQLS*ALGNML
Trigger: TAGCATATTCCCTAGAGCTCAAGAAAGCTGGTCCAG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTATTTGTCTTTTGATGTaGCTTTCAACCACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSICLLM*LSTTSH
Trigger: GTGGCTTGTGGTTGAAAGTCACATCAAAAGACAAAT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCCACATTTGTCTTTTaGTGTGACTTTCAACCACAA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSATFVF*CDFQPQ
Trigger: TTGTGGTTGAAAGTCACATCAAAAGACAAATGTGGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTTGCTCAATGGGAGATaGCAGACCAACTTCTCAACG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLLNGR*QTNFST
Trigger: CGTTGAGAAGTTGGTCTGTCATCTCCCATTGAGCAA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGTTTCTTGGCCTACTTaGGAGGAACTTCCATATTTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSVSWPT*EELPYF
Trigger: AAAATATGGAAGTTCCTCTCAAGTAGGCCAAGAAAC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTGCTGTCCTTCTCCGTaGAGGATTACTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSCCPSP*RITPSL
Trigger: AAGTGAAGGAGTAATCCTGCACGGAGAAGGACAGCA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTATCTCTCTAGGCATTTaGCTCCATTTTCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSISLGI*LHFHSL
Trigger: CAAACTGTGAAAATGGAGGCAAATGCCTAGAGAGAT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCTACCAGCATACTTGTaGTTGCTTGATAATGTATTG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQLPAYL*LLDNVL
Trigger: CAATACATTATCAAGCAAGCACAAGTATGCTGGTAG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCTTGTTAGTAAAGGATaGTTGTTTGTCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQLVSKG*LFVKCR
Trigger: CCTGCATTTGACAAACAAGCATCCTTTACTAACAAG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGGTTTCAAGGTATTTTaGAGTCAAGAATCAATGGCA +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHGFKVF*SQESMA
Trigger: TGCCATTGATTCTTGACTGCAAAATACCTTGAAACC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTATGTACTTTAAAGTTTaGAGCACTACCATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSMYFKV*STTMQG
Trigger: ACCCTGCATGGTAGTGCTGCAAACTTTAAAGTACAT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTAAAAGGACACTTCTGTaGCAGACTTCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFKRTLL*QTSAPA
Trigger: AGCTGGAGCTGAAGTCTGCCACAGAAGTGTCCTTTT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACACTACAATCTCTACTaGCCCATTTCCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRHYNLY*PISHIK
Trigger: TTTGATGTGGGAAATGGGCCAGTAGAGATTGTAGTG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTTGGCCATGTTCCTGTaGTCTACGTCAATATTGTAT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLAMFL*STSILY
Trigger: ATACAATATTGACGTAGACCACAGGAACATGGCCAA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCCATTTCTTATAGCTTaGCCTTGTCCTGGATTATAT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHPFLIA*PCPGLY
Trigger: ATATAATCCAGGACAAGGCCAAGCTATAAGAAATGG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGGATAGTTACAGCTATTaGTCTAAGACTACATACGTG +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQDSYSY*SKTTYV
Trigger: CACGTATGTAGTCTTAGACCAATAGCTGTAACTATC...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGATAGTTACAGCTATTaGTCTAAGACTACATACGTG +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHDSYSY*SKTTYV
Trigger: CACGTATGTAGTCTTAGACCAATAGCTGTAACTATC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTTGAATTCCTCAGAATaGTGGGATCTCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHLNSSE*WDLKTF
Trigger: AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGAATGTGCTCTGTACTaGTGTAATGTGCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFECALY*CNVPLA
Trigger: TGCCAGTGGCACATTACACCAGTACAGAGCACATTC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGCTTTTTCAACCTCCTaGACCAGCTTTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFAFSTS*TSFLEL
Trigger: GAGCTCAAGAAAGCTGGTCCAGGAGGTTGAAAAAGC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTTTAGGACCTATCTTTaGCTGGCTTACTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQFRTYL*LAYLNS
Trigger: TGAATTCAAGTAAGCCAGCCAAAGATAGGTCCTAAA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAAATTAACTGAGACTTaGAAATGGTGCAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHKLTET*KWCRLS
Trigger: AGACAGTCTGCACCATTTCCAAGTCTCAGTTAATTT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAAAAGGACACTTCTGTaGCAGCTTGGTGTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSKRTLL*QLGVFK
Trigger: TTTAAAGACACCAAGCTGCCACAGAAGTGTCCTTTT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628930.2
3UTR CAA 72 bp TTTGGTTTCCTGTCTGATGGCCACATTGTAACCCTCTaGAAGGAAGACAGTGTCCTATATGTCTTAATTGAT +
Preference number: 4 (lower is better)
Translates to: FGFLSDGHIVTL*KEDSVLYVLID
Trigger: ATCAATTAAGACATATAGGACACTGTCTTCCTTCAAGAGGGTTACAATGTGGCCATCAGACAGGAAACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTAAACTGGAAACTGACTaGGAACAGGTCCTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSKLETD*EQVLVK
Trigger: CTTAACCAGGACCTGTTCTCAGTCAGTTTCCAGTTT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTTTGTTGCTGGTGCCTaGAAGTTATATCGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFFVAGA*KLYRSH
Trigger: GTGGCTACGATATAACTTTCAGGCACCAGCAACAAA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTTTGTTGCTGGTGCCTaGAAGTTATATCGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSFVAGA*KLYRSH
Trigger: GTGGCTACGATATAACTTTCAGGCACCAGCAACAAA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR TCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGTTTGAAATTTTGGTaGGAGGATTGGATCTCATTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGLKFW*EDWISF
Trigger: AAATGAGATCCAATCCTCTCACCAAAATTTCAAACC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATTCACTAGGCTCCGTTaGCTTCAGTCTTTATATAAG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRFTRLR*LQSLYK
Trigger: CTTATATAAAGACTGAAGTCAACGGAGCCTAGTGAA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAACCAACTTCTCAACGTaGTTTCCCCATTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRTNFST*FPHFIE
Trigger: TTCAATGAAATGGGGAAATCACGTTGAGAAGTTGGT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGTTTCTTGGCCTACTTaGGAGGAACTTCCATATTTT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRVSWPT*EELPYF
Trigger: AAAATATGGAAGTTCCTCTCAAGTAGGCCAAGAAAC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTGCCAGAGAAAGGGATaGCTCCAAAGGTTATCTCAT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFCQRKG*LQRLSH
Trigger: ATGAGATAACCTTTGGAGGCATCCCTTTCTCTGGCA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR GCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACAAAGTGTTGAGACAATaGATAAAGAACAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHKVLRQ*IKNRAI
Trigger: GATAGCTCTGTTCTTTATGCATTGTCTCAACACTTT...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCTACCAGCATACTTGTaGTTGCTTGATAATGTATTG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLPAYL*LLDNVL
Trigger: CAATACATTATCAAGCAAGCACAAGTATGCTGGTAG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATGCTTGTTTGTCAAATaGAGGGCAGTAGGACATTTT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRCLFVK*RAVGHF
Trigger: AAAATGTCCTACTGCCCTGCATTTGACAAACAAGCA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCTTGTTAGTAAAGGATaGTTGTTTGTCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLVSKG*LFVKCR
Trigger: CCTGCATTTGACAAACAAGCATCCTTTACTAACAAG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGAGAGAGAAAGGGGATaGTGTCAGCTAATTCTCATG +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFERERG*CQLILM
Trigger: CATGAGAATTAGCTGACAGCATCCCCTTTCTCTCTC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATCCGAAAGCAGCAGTTaGTGTAAATTAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRSESSS*CKLTET
Trigger: AGTCTCAGTTAATTTACAGCAACTGCTGCTTTCGGA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCTCTCTTGTTTATCTTaGCATAGCCGGGAGAATAGC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLSCLS*HSRENS
Trigger: GCTATTCTCCCGGCTATGCCAAGATAAACAAGAGAG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCATTTCTTATAGCTTaGCCTTGTCCTGGATTATAT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPFLIA*PCPGLY
Trigger: ATATAATCCAGGACAAGGCCAAGCTATAAGAAATGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CCA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGCTCTGCTTAAAAACTaGCAAATAATAGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHALLKN*QIIGSL
Trigger: AAGAGAACCTATTATTTGCCAGTTTTTAAGCAGAGC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTCACAGCAGTGTGATTaGATGGAAAAACACGTGGAG +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFSQQCD*MEKHVE
Trigger: CTCCACGTGTTTTTCCATCCAATCACACTGCTGTGA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATGTATGGGAATTAACTaGTCCAATGTCTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRCMGIN*SNVSFG
Trigger: TCCAAAGGAGACATTGGACCAGTTAATTCCCATACA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTTAAGACAGACTCTTTaGCTCATGCCAATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSLRQTL*LMPMLF
Trigger: AAAAAGCATTGGCATGAGCCAAAGAGTCTGTCTTAA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCTGTTTGTTTCGCACTaGTTTAGGATCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLFVSH*FRIRWF
Trigger: GAACCACCTGATCCTAAACCAGTGCGAAACAAACAG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCCAGTCTTTGCTCAATaGGAGATGACAGACCAACTT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSPVFAQ*EMTDQL
Trigger: AAGTTGGTCTGTCATCTCCCATTGAGCAAAGACTGG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCCAGTCTTTGCTCAATaGGAGATGACAGACCAACTT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFPVFAQ*EMTDQL
Trigger: AAGTTGGTCTGTCATCTCCCATTGAGCAAAGACTGG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAAATTAACTGAGACTTaGAAATGGTGCAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSKLTET*KWCRLS
Trigger: AGACAGTCTGCACCATTTCCAAGTCTCAGTTAATTT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTGTGTGATGTTGATGTaGACACCCACTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFCVMLM*TPTLLS
Trigger: TGAAAGCAAAGTGGGTGTTCACATCAACATCACACA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTGGCTCACTGGCAGGTaGTCTTTGTATGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFWLTGR*SLYDKK
Trigger: TTTCTTATCATACAAAGATCACCTGCCAGTGAGCCA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAAACACGTGGAGTAGTTaGTTTAAAATATGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRNTWSS*FKIWQC
Trigger: ACACTGCCATATTTTAAATCAACTACTCCACGTGTT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGATGTCAAGATTTTGTaGGATGTGAATGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRDVKIL*DVNDKA
Trigger: TGCTTTGTCATTCACATCTCACAAAATCTTGACATC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTAAATGTTCCATCATATaGAGTATTAGAGCAATCGCA +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSKCSII*SIRAIA
Trigger: TGCGATTGCTCTAATACTGCATATGATGGAACATTT...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCCCAAGAAACTGATGTaGTCCAATAAGTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSPKKLM*SNKLGT
Trigger: TGTGCCTAACTTATTGGAGCACATCAGTTTCTTGGG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGGTTTCAAGGTATTTTaGAGTCAAGAATCAATGGCA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRGFKVF*SQESMA
Trigger: TGCCATTGATTCTTGACTGCAAAATACCTTGAAACC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAATTTTTATTATCTCCTaGCAGTCTTTGCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRIFIIS*QSLLNG
Trigger: CCCATTGAGCAAAGACTGGCAGGAGATAATAAAAAT...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGCAACCAGTGAATCCTaGGGTGTTGTATTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSATSES*GVVFVN
Trigger: ATTCACAAATACAACACCCCAGGATTCACTGGTTGC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCTCTGCTTAAAAACTaGCAAATAATAGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSALLKN*QIIGSL
Trigger: AAGAGAACCTATTATTTGCCAGTTTTTAAGCAGAGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTCAAACTACCTTCCCTaGTTCTTTAATGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFSNYLP*FFNASL
Trigger: GAGAGAGGCATTAAAGAACCAGGGAAGGTAGTTTGA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATTAAGACAGACTCTTTaGCTCATGCCAATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRLRQTL*LMPMLF
Trigger: AAAAAGCATTGGCATGAGCCAAAGAGTCTGTCTTAA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGATTTAGGACCTATCTTTaGCTGGCTTACTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRFRTYL*LAYLNS
Trigger: TGAATTCAAGTAAGCCAGCCAAAGATAGGTCCTAAA...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGTTTGTATTTTGTGTTaGCCTATGTATAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSVCILC*PMYKPI
Trigger: GATTGGCTTATACATAGGCCAACACAAAATACAAAC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CAA 72 bp CTAGTTTACATGCTGTTGCTTTTAGAGAGTGAAATTTaGTGTTATTTCACAGGGGATGGAATCCTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: LVYMLLLLESEI*CYFTGDGILFD
Trigger: GTCAAACAGGATTCCATCCCCTGTGAAATAACACAAAATTTCACTCTCTAAAAGCAACAGCATGTAAACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGGGGTGTTGTATTTGTaGATCTCTTGGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSGVLYL*ISWSIF
Trigger: GAAAATTGACCAAGAGATTCACAAATACAACACCCC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGCTCTAATTCCCCATTaGGGCGCTTATACATATATA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFALIPH*GAYTYI
Trigger: TATATATGTATAAGCGCCTCAATGGGGAATTAGAGC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGCCACCAACTTTCCCTaGAACTTTAAAACAGTCTAT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFATNFP*NFKTVY
Trigger: ATAGACTGTTTTAAAGTTTCAGGGAAAGTTGGTGGC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTATTTGTCTTTTGATGTaGCTTTCAACCACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSICLLM*LSTTSH
Trigger: GTGGCTTGTGGTTGAAAGTCACATCAAAAGACAAAT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGCCACATTTGTCTTTTaGTGTGACTTTCAACCACAA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSATFVF*CDFQPQ
Trigger: TTGTGGTTGAAAGTCACATCAAAAGACAAATGTGGC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGTTTCTTGGCCTACTTaGGAGGAACTTCCATATTTT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSVSWPT*EELPYF
Trigger: AAAATATGGAAGTTCCTCTCAAGTAGGCCAAGAAAC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTCCGAAAGCAGCAGTTaGTGTAAATTAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFSESSS*CKLTET
Trigger: AGTCTCAGTTAATTTACAGCAACTGCTGCTTTCGGA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTGTATGGGAATTAACTaGTCCAATGTCTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSCMGIN*SNVSFG
Trigger: TCCAAAGGAGACATTGGACCAGTTAATTCCCATACA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTTGTATGGGAATTAACTaGTCCAATGTCTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFCMGIN*SNVSFG
Trigger: TCCAAAGGAGACATTGGACCAGTTAATTCCCATACA...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTAGGGGGTTAATGTTTTaGAGTAGAAAGAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSRGLMF*SRKKCQ
Trigger: CTGACATTTCTTTCTACTTCAAAACATTAACCCCCT...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTAACACGTGGAGTAGTTaGTTTAAAATATGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFNTWSS*FKIWQC
Trigger: ACACTGCCATATTTTAAATCAACTACTCCACGTGTT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGGTTTGAAATTTTGGTaGGAGGATTGGATCTCATTT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSGLKFW*EDWISF
Trigger: AAATGAGATCCAATCCTCTCACCAAAATTTCAAACC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR TCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGATGTCAAGATTTTGTaGGATGTGAATGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFDVKIL*DVNDKA
Trigger: TGCTTTGTCATTCACATCTCACAAAATCTTGACATC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTATAATAGGTTCTCTTTaGCCCTTTCTTTTCCGACTT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFIIGSL*PFLFRL
Trigger: AAGTCGGAAAAGAAAGGGGCAAAGAGAACCTATTAT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGGTTTCAAGGTATTTTaGAGTCAAGAATCAATGGCA +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSGFKVF*SQESMA
Trigger: TGCCATTGATTCTTGACTGCAAAATACCTTGAAACC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTTTAAGACAGACTCTTTaGCTCATGCCAATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSLRQTL*LMPMLF
Trigger: AAAAAGCATTGGCATGAGCCAAAGAGTCTGTCTTAA...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
3UTR CAA 72 bp GTTTTCCATATCATCCAGAGTAACAGCAATAATAACTaGACTTTATTGTGTTGTGTCCATTTACAGGACACT +
Preference number: 4 (lower is better)
Translates to: VFHIIQSNSNNN*TLLCCVHLQDT
Trigger: AGTGTCCTGTAAATGGACACAACACAATAAAGTCAAGTTATTATTGCTGTTACTCTGGATGATATGGAAAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTAAAGTGTTGAGACAATaGATAAAGAACAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFKVLRQ*IKNRAI
Trigger: GATAGCTCTGTTCTTTATGCATTGTCTCAACACTTT...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTCAGCATACTTGTGCTTaGTTGATAATGTATTGGAAT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFQHTCA*LIMYWN
Trigger: ATTCCAATACATTATCAAGCAAGCACAAGTATGCTG...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCAGCATACTTGTGCTTaGTTGATAATGTATTGGAAT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSQHTCA*LIMYWN
Trigger: ATTCCAATACATTATCAAGCAAGCACAAGTATGCTG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR GCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTCAAAACATCGACATTTaGTTCATACACAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSQNIDI*FIHRRC
Trigger: ACATCTTCTGTGTATGAAGCAAATGTCGATGTTTTG...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp AAGGAAAAAGTGATCATATTGAATTCCTCAGAATGGTGGGATCTCAAGACTTTTGCTCTGCTTAAAAACTaGCAAATAATAGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KEKVIILNSSEWWDLKTFALLKN*QIIGSL
Trigger: AAGAGAACCTATTATTTGCCAGTTTTTAAGCAGAGC...AAAAGTCTTGAGATCCCACCATTCTGAGGAATTCAATATGATCACTTTTTCCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CCA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGTTTGTATTTTGTGTTaGCCTATGTATAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSVCILC*PMYKPI
Trigger: GATTGGCTTATACATAGGCCAACACAAAATACAAAC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS GCA 90 bp CCAGGCTCTGCAGAGGCAGCTGCTGACAATCCACAGCAGGAGCGCTaGCCCGCAGCCGGCGCGCGGAGCCGCCTGCATCCTTCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: PGSAEAAADNPQQER*PAAGARSRLHPSPP
Trigger: GGGAGGCGAAGGATGCAGGCGGCTCCGCGCGCCGGCTGCGGGGCAGCGCTCCTGCTGTGGATTGTCAGCAGCTGCCTCTGCAGAGCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000625365.2
CDS TCA 90 bp TTTGGGACGTGGAGGGAGCCGTCCAGGCTCTGCAGAGGCAGCTGCTaGCAATCCACAGCAGGAGCGCTGCCCCGCAGCCGGCGCGCGGAG +
Preference number: 5 (lower is better)
Translates to: FGTWREPSRLCRGSC*QSTAGALPRSRRAE
Trigger: CTCCGCGCGCCGGCTGCGGGGCAGCGCTCCTGCTGTGGATTGTCAGCAGCTGCCTCTGCAGAGCCTGGACGGCTCCCTCCACGTCCCAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000625365.2
CDS CCA 90 bp TGGCGGACGACATGGGGGAGAGGGTCAGCGGCGAGGCCCCGCAGTTaGACTCCACCAGCTCGCCCTGGATGTGGACGTGAGCCGAGGCGT +
Preference number: 5 (lower is better)
Translates to: WRTTWGRGSAARPRS*TPPARPGCGREPRR
Trigger: ACGCCTCGGCTCACGTCCACATCCAGGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGCCGCTGACCCTCTCCCCCATGTCGTCCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636242.1
ENST00000636399.1
ENST00000636870.1
ENST00000637020.1
CDS TCA 90 bp GAGGCCCCGCAGTTGGACTCCACCAGCTCGCCCTGGATGTGGACGTaGGCCGAGGCGTTTGTCTGCCTCAAGGCGGCCTTGAGAGGGGCG +
Preference number: 5 (lower is better)
Translates to: EAPQLDSTSSPWMWT*AEAFVCLKAALRGA
Trigger: CGCCCCTCTCAAGGCCGCCTTGAGGCAGACAAACGCCTCGGCTCACGTCCACATCCAGGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636242.1
ENST00000636399.1
ENST00000636870.1
ENST00000637020.1
CDS GCA 90 bp ACTGGCTGTAGAGCTCCAGGCGGGTGTGGCCTTCTGTTGGGGCCTTaGGGATCTGCTGCGGTAGCCGGTCCACCTGTAGGCTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: TGCRAPGGCGLLLGP*GSAAVAGPPVGWPA
Trigger: AGCAGGCCAGCCTACAGGTGGACCGGCTACCGCAGCAGATCCGCAAGGCCCCAACAGAAGGCCACACCCGCCTGGAGCTCTACAGCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000631199.2
ENST00000636870.1
ENST00000637020.1
CDS GCA 90 bp AGCTCCAGGCGGGTGTGGCCTTCTGTTGGGGCCTTGCGGATCTGCTaGGGTAGCCGGTCCACCTGTAGGCTGGCCTGCTTGACATTCCTC +
Preference number: 5 (lower is better)
Translates to: SSRRVWPSVGALRIC*GSRSTCRLACLTFL
Trigger: GAGGAATGTCAAGCAGGCCAGCCTACAGGTGGACCGGCTACCGCAGCAGATCCGCAAGGCCCCAACAGAAGGCCACACCCGCCTGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000631199.2
ENST00000636870.1
ENST00000637020.1
CDS GCA 90 bp GCCTTGCGGATCTGCTGCGGTAGCCGGTCCACCTGTAGGCTGGCCTaGTTGACATTCCTCTCTGCAGTGACCCGGTGCCACTGGTCATCG +
Preference number: 5 (lower is better)
Translates to: ALRICCGSRSTCRLA*LTFLSAVTRCHWSS
Trigger: CGATGACCAGTGGCACCGGGTCACTGCAGAGAGGAATGTCAAGCAGGCCAGCCTACAGGTGGACCGGCTACCGCAGCAGATCCGCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000631199.2
ENST00000636870.1
ENST00000637020.1
CDS TCA 90 bp GTTTCTCTTCCCGCCAGCCCCGGTTCAGGTGTGCCCCTCGCTTTGTaGTGCAGGTGGCTTTCCCACTGGCCGGGTCAGACTTCAGAACCC +
Preference number: 5 (lower is better)
Translates to: VSLPASPGSGVPLAL*CRWLSHWPGQTSEP
Trigger: GGGTTCTGAAGTCTGACCCGGCCAGTGGGAAAGCCACCTGCATCACAAAGCGAGGGGCACACCTGAACCGGGGCTGGCGGGAAGAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS CCA 90 bp GTGGTGCTGAAGCTGAAGCGGATCTCCTCCTGTGCCAGGTCCGGGTaGGAGTTCTGCTGGTCGGGAGCGTTGTCTACTCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VVLKLKRISSCARSG*EFCWSGALSTLLLE
Trigger: CTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCAGAACTCCCACCCGGACCTGGCACAGGAGGAGATCCGCTTCAGCTTCAGCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636870.1
ENST00000637020.1
CDS GCA 90 bp AAGCTGAAGCGGATCTCCTCCTGTGCCAGGTCCGGGTGGGAGTTCTaGTGGTCGGGAGCGTTGTCTACTCTGCTGCTGGAGTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: KLKRISSCARSGWEF*WSGALSTLLLESLA
Trigger: TGCCAGAGACTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCAGAACTCCCACCCGGACCTGGCACAGGAGGAGATCCGCTTCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636870.1
ENST00000637020.1
CDS GCA 90 bp CGCTCTCTGCCGACTCCGCCCCCTTTGCTTCGTTGGTATGGTAGGTaGCCTTGTGGCGGAACATGTACCGGATCAGGAAGACCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: RSLPTPPPLLRWYGR*PCGGTCTGSGRPGC
Trigger: GCACCCTGGTCTTCCTGATCCGGTACATGTTCCGCCACAAGGGCACCTACCATACCAACGAAGCAAAGGGGGCGGAGTCGGCAGAGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000602734.4
ENST00000613345.2
ENST00000627772.2
ENST00000628930.2
ENST00000632946.1
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636242.1
ENST00000636399.1
ENST00000636870.1
ENST00000637020.1
CDS GCA 90 bp GGTCAATTTTCCCTGTTTCTCTTCCCGCCAGCCCCGGTTCAGGTGTaGCCCTCGCTTTGTGATGCAGGTGGCTTTCCCACTGGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: GQFSLFLFPPAPVQV*PSLCDAGGFPTGRV
Trigger: GACCCGGCCAGTGGGAAAGCCACCTGCATCACAAAGCGAGGGGCACACCTGAACCGGGGCTGGCGGGAAGAGAAACAGGGAAAATTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS CCA 90 bp TTGCCTCTTGCACCCTCTGGCTGTCAAAACCCTTCTGCCCTGCCCTaGCCTCGTTTGAAAGCAAAAGGGAGACTGAGCCGACCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LPLAPSGCQNPSALP*PRLKAKGRLSRPAG
Trigger: CCCGGCCGGTCGGCTCAGTCTCCCTTTTGCTTTCAAACGAGGCCAGGGCAGGGCAGAAGGGTTTTGACAGCCAGAGGGTGCAAGAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625365.2
CDS GCA 90 bp TGTGAAGTTGGGGTCGTTGTTCATGATGGCGGCGTCCGCGCTCTCTaGCGACTCCGCCCCCTTTGCTTCGTTGGTATGGTAGGTGCCCTT +
Preference number: 5 (lower is better)
Translates to: CEVGVVVHDGGVRAL*RLRPLCFVGMVGAL
Trigger: AAGGGCACCTACCATACCAACGAAGCAAAGGGGGCGGAGTCGGCAGAGAGCGCGGACGCCGCCATCATGAACAACGACCCCAACTTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000602734.4
ENST00000613345.2
ENST00000627772.2
ENST00000628930.2
ENST00000632946.1
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636242.1
ENST00000636399.1
ENST00000636870.1
ENST00000637020.1
CDS CCA 90 bp CTGCGGAGATGCAGTCCGACTCTCCGTAGGGTTCTTGAAGGGAGATaGGCTGTCCTCAAATACGCGAGGAAGCCAAGCCCCTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LRRCSPTLRRVLEGR*AVLKYARKPSPSRF
Trigger: GAAGCGGGAGGGGCTTGGCTTCCTCGCGTATTTGAGGACAGCCCATCTCCCTTCAAGAACCCTACGGAGAGTCGGACTGCATCTCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625365.2
CDS GCA 90 bp CGTGCGGGTATTGCCTCTTGCACCCTCTGGCTGTCAAAACCCTTCTaGCCTGCCCTGGCCTCGTTTGAAAGCAAAAGGGAGACTGAGCCG +
Preference number: 5 (lower is better)
Translates to: RAGIASCTLWLSKPF*PALASFESKRETEP
Trigger: CGGCTCAGTCTCCCTTTTGCTTTCAAACGAGGCCAGGGCAGGGCAGAAGGGTTTTGACAGCCAGAGGGTGCAAGAGGCAATACCCGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625365.2
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCGTGGCGGGTGATGTaGACACTGTGGGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSWRVM*TLWGCP
Trigger: TGGACAGCCCCACAGTGTCAACATCACCCGCCACGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS TCA 90 bp CCAGTATTTGTACTACAGAACTTGTACCAGTGGCCGCCCGGTGTCTaGGGGCTCCAGCCTCCCACTGAGAGCTACACCATCGGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: PVFVLQNLYQWPPGV*GLQPPTESYTIGFP
Trigger: AGGGAAGCCGATGGTGTAGCTCTCAGTGGGAGGCTGGAGCCCTCAGACACCGGGCGGCCACTGGTACAAGTTCTGTAGTACAAATACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636988.1
CDS TCA 90 bp CCTGTCTCCTTGGCAGCGCAGAGGACCTACGCTCAATTTGGCTTCTaGGCCTTGACGGTCAGTATCTCCAACCACCACTTGGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: PVSLAAQRTYAQFGF*ALTVSISNHHLAHW
Trigger: CCAGTGAGCCAAGTGGTGGTTGGAGATACTGACCGTCAAGGCTCAGAAGCCAAATTGAGCGTAGGTCCTCTGCGCTGCCAAGGAGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000636870.1
CDS GCA 90 bp ACCTGTAGGCTGGCCTGCTTGACATTCCTCTCTGCAGTGACCCGGTaGCACTGGTCATCGTTGAGAGGGGTTGGTGACCTCACTACAATC +
Preference number: 5 (lower is better)
Translates to: TCRLACLTFLSAVTR*HWSSLRGVGDLTTI
Trigger: GATTGTAGTGAGGTCACCAACCCCTCTCAACGATGACCAGTGGCACCGGGTCACTGCAGAGAGGAATGTCAAGCAGGCCAGCCTACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000631199.2
ENST00000636870.1
ENST00000637020.1
CDS GCA 90 bp CCAGGTCCGGGTGGGAGTTCTGCTGGTCGGGAGCGTTGTCTACTCTaGTGCTGGAGTCTCTGGCATTTGTTGCTGGTGCCTGAAAGTTAT +
Preference number: 5 (lower is better)
Translates to: PGPGGSSAGRERCLL*CWSLWHLLLVPESY
Trigger: ATAACTTTCAGGCACCAGCAACAAATGCCAGAGACTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCAGAACTCCCACCCGGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636870.1
ENST00000637020.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTGTAATCCCAGCAATTaGCAAGGCCGAGGTGGACGG +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSCNPSN*QGRGGR
Trigger: CCGTCCACCTCGGCCTTGCAAATTGCTGGGATTACA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS TCA 90 bp ACTGTCTCCTTGGCAGCGCAGAGGACCTACGCTCAATTTGGCTTCTaGGCCTTGACGGTCAGTATCTCCAACCACCACTTGGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: TVSLAAQRTYAQFGF*ALTVSISNHHLAHW
Trigger: CCAGTGAGCCAAGTGGTGGTTGGAGATACTGACCGTCAAGGCTCAGAAGCCAAATTGAGCGTAGGTCCTCTGCGCTGCCAAGGAGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455301.2
CDS GCA 90 bp TGTAGTCCGCGTCGCAGTTACAGTAGTACTTGGGATCTGTGCAGTTaGGTTCGATGCCGCAGGCACATTTCTGGATTCCAGGCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: CSPRRSYSSTWDLCS*VRCRRHISGFQAQS
Trigger: GCTCTGGGCCTGGAATCCAGAAATGTGCCTGCGGCATCGAACGCAACTGCACAGATCCCAAGTACTACTGTAACTGCGACGCGGACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361727.8
ENST00000455301.2
ENST00000627772.2
ENST00000636870.1
ENST00000637825.1
CDS GCA 90 bp GGTCCGGGTGGGAGTTCTGCTGGTCGGGAGCGTTGTCTACTCTGCTaGTGGAGTCTCTGGCATTTGTTGCTGGTGCCTGAAAGTTATATC +
Preference number: 5 (lower is better)
Translates to: GPGGSSAGRERCLLC*WSLWHLLLVPESYI
Trigger: GATATAACTTTCAGGCACCAGCAACAAATGCCAGAGACTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCAGAACTCCCACCCGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636870.1
ENST00000637020.1
CDS CCA 90 bp AGGCTGGCCTGCTTGACATTCCTCTCTGCAGTGACCCGGTGCCACTaGTCATCGTTGAGAGGGGTTGGTGACCTCACTACAATCTCTACT +
Preference number: 5 (lower is better)
Translates to: RLACLTFLSAVTRCH*SSLRGVGDLTTIST
Trigger: AGTAGAGATTGTAGTGAGGTCACCAACCCCTCTCAACGATGACCAGTGGCACCGGGTCACTGCAGAGAGGAATGTCAAGCAGGCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000631199.2
ENST00000636870.1
ENST00000637020.1
CDS CCA 90 bp CGGGTGATGTTGACACTGTGGGGCTGTCCATTGGCCATGTTCCTGTaGTCTACGTCAATATTGTATGGCTCTCGGGTGCCACCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RVMLTLWGCPLAMFL*STSILYGSRVPPRL
Trigger: CAACCTGGGTGGCACCCGAGAGCCATACAATATTGACGTAGACCACAGGAACATGGCCAATGGACAGCCCCACAGTGTCAACATCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636870.1
ENST00000637020.1
CDS CCA 90 bp TTCTGTGGCCTTAAGACTTGGACTGAGCCATGCTGCTGGCTTCCCTaGTTCTCCAGGTTGCAGACGGCCGATTGTGGGACTTCTGCCATA +
Preference number: 5 (lower is better)
Translates to: FCGLKTWTEPCCWLP*FSRLQTADCGTSAI
Trigger: TATGGCAGAAGTCCCACAATCGGCCGTCTGCAACCTGGAGAACCAGGGAAGCCAGCAGCATGGCTCAGTCCAAGTCTTAAGGCCACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636988.1
CDS-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACGGCGAGGCCCCGCAGTaGGACTCCACCAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHGEAPQ*DSTSSP
Trigger: GGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGCC...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGTGAAGTTGGGGTCGTaGTTCATGATGGCGGCGTCC +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATVKLGS*FMMAAS
Trigger: GGACGCCGCCATCATGAACAACGACCCCAACTTCAC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTCCCGGCGGGCAGCTTaGAGTCCACCGCTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLSRRAA*SPPLSG
Trigger: TCCCGAGAGCGGTGGACTCAAAGCTGCCCGCCGGGA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS TCA 90 bp TGGCATAGCCGGGAGAATAGCTACCAGAGATGGAGGAGGAGCTGCTaGAAGCCACATGGGGGAGTCCAGAGACAAGTGGCTCATCACATT +
Preference number: 5 (lower is better)
Translates to: WHSRENSYQRWRRSC*KPHGGVQRQVAHHI
Trigger: AATGTGATGAGCCACTTGTCTCTGGACTCCCCCATGTGGCTTTCAGCAGCTCCTCCTCCATCTCTGGTAGCTATTCTCCCGGCTATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000625365.2
ENST00000636561.1
ENST00000637150.1
ENST00000637694.1
ENST00000638117.1
CDS TCA 90 bp TTTGTCTCCTTGGCAGCGCAGAGGACCTACGCTCAATTTGGCTTCTaGGCCTTGACGGTCAGTATCTCCAACCACCACTTGGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: FVSLAAQRTYAQFGF*ALTVSISNHHLAHW
Trigger: CCAGTGAGCCAAGTGGTGGTTGGAGATACTGACCGTCAAGGCTCAGAAGCCAAATTGAGCGTAGGTCCTCTGCGCTGCCAAGGAGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637825.1
CDS CCA 90 bp CCGGGTGGGAGTTCTGCTGGTCGGGAGCGTTGTCTACTCTGCTGCTaGAGTCTCTGGCATTTGTTGCTGGTGCCTGAAAGTTATATCGTA +
Preference number: 5 (lower is better)
Translates to: PGGSSAGRERCLLCC*SLWHLLLVPESYIV
Trigger: TACGATATAACTTTCAGGCACCAGCAACAAATGCCAGAGACTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCAGAACTCCCACCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636870.1
ENST00000637020.1
CDS-3UTR CAA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCATGCTGGTCGGGAGCGTaGTCTACTCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSCWSGA*STLLLE
Trigger: CTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCA...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGCGAGGCCCCGCAGTaGGACTCCACCAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGEAPQ*DSTSSP
Trigger: GGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGCC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CAA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACCGACTCCGCCCCCTTaGCTTCGTTGGTATGGTAGG +
Preference number: 5 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSPTPPP*LRWYGR
Trigger: CCTACCATACCAACGAAGCAAAGGGGGCGGAGTCGG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTGCAGTGAGCCCGAGATaGCGCCAGTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLAVSPR*RQCTPA
Trigger: GGCTGGAGTGCACTGGCGCAATCTCGGGCTCACTGC...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCAAAAGTTCGAGGACTaGACCAAGGTCACACAGGGA +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSQKFED*TKVTQG
Trigger: TCCCTGTGTGACCTTGGTCAAGTCCTCGAACTTTTG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCCCGAGGACCGTCCTTaGTCGGCCGGCAGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHPEDRP*SAGSPS
Trigger: ACTCGGGCTGCCGGCCGACAAAGGACGGTCCTCGGG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS TCA 90 bp GGCACTTATCTGGTCCATGGAGGCGCTGTAAACGAGCTGTGTCACTaGGTATTTTTCTGGGTTGTAGCCGACCACAGGCGTCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: GTYLVHGGAVNELCH*VFFWVVADHRRLHL
Trigger: CAGATGCAGACGCCTGTGGTCGGCTACAACCCAGAAAAATACTCAGTGACACAGCTCGTTTACAGCGCCTCCATGGACCAGATAAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000636870.1
ENST00000637825.1
ENST00000638117.1
CDS GCA 90 bp ATTGCTTGTAGTCCGCGTCGCAGTTACAGTAGTACTTGGGATCTGTaGAGTTGCGTTCGATGCCGCAGGCACATTTCTGGATTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: IACSPRRSYSSTWDL*SCVRCRRHISGFQA
Trigger: GGCCTGGAATCCAGAAATGTGCCTGCGGCATCGAACGCAACTGCACAGATCCCAAGTACTACTGTAACTGCGACGCGGACTACAAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361727.8
ENST00000455301.2
ENST00000627772.2
ENST00000636870.1
ENST00000637825.1
CDS CCA 90 bp CCTTCCTCCATTGCTTGTAGTCCGCGTCGCAGTTACAGTAGTACTTaGGATCTGTGCAGTTGCGTTCGATGCCGCAGGCACATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: PSSIACSPRRSYSST*DLCSCVRCRRHISG
Trigger: TCCAGAAATGTGCCTGCGGCATCGAACGCAACTGCACAGATCCCAAGTACTACTGTAACTGCGACGCGGACTACAAGCAATGGAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361727.8
ENST00000455301.2
ENST00000627772.2
ENST00000636870.1
ENST00000637825.1
CDS CCA 90 bp TTTCCCCTAGGGCTGGGACATCTCCTGCCCTTGGCATCAGAACTCTaGGTTCTCCAGTATTTGTACTACAGAACTTGTACCAGTGGCCGC +
Preference number: 5 (lower is better)
Translates to: FPLGLGHLLPLASEL*VLQYLYYRTCTSGR
Trigger: GCGGCCACTGGTACAAGTTCTGTAGTACAAATACTGGAGAACCCAGAGTTCTGATGCCAAGGGCAGGAGATGTCCCAGCCCTAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636988.1
CDS-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGAGGCGAGGCCCCGCAGTaGGACTCCACCAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRGEAPQ*DSTSSP
Trigger: GGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGCC...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCACACAACCTGAACACTaGCATGTTCAAGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSTQPEH*HVQVPQ
Trigger: CTGTGGGACTTGAACATGCAAGTGTTCAGGTTGTGT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTCCCGGCGGGCAGCTTaGAGTCCACCGCTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHSRRAA*SPPLSG
Trigger: TCCCGAGAGCGGTGGACTCAAAGCTGCCCGCCGGGA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCCGAGGACCGTCCTTaGTCGGCCGGCAGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPEDRP*SAGSPS
Trigger: ACTCGGGCTGCCGGCCGACAAAGGACGGTCCTCGGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463592.3
ENST00000613345.2
CDS TCA 90 bp TCTCCCTGTGTCGCTGTAGAGCATCCGGTATTGGGTCACCCAATCTaGGCTGCTATACCTTCCTTGGGTTGCAATGGCACTGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: SPCVAVEHPVLGHPI*AAIPSLGCNGTDLL
Trigger: AAGCAGATCAGTGCCATTGCAACCCAAGGAAGGTATAGCAGCTCAGATTGGGTGACCCAATACCGGATGCTCTACAGCGACACAGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361727.8
ENST00000636561.1
ENST00000637150.1
ENST00000637694.1
ENST00000638117.1
CDS TCA 90 bp TGCAGAAATAGGAGACATACTGCTCGCAGTACTCGGCACTGTCAGTaGTGGCACTTATCTGGTCCATGGAGGCGCTGTAAACGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: CRNRRHTARSTRHCQ*WHLSGPWRRCKRAV
Trigger: CACAGCTCGTTTACAGCGCCTCCATGGACCAGATAAGTGCCATCACTGACAGTGCCGAGTACTGCGAGCAGTATGTCTCCTATTTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000636870.1
ENST00000637825.1
ENST00000638117.1
CDS CCA 90 bp AATAATTCCTGTCTCCTTGGCAGCGCAGAGGACCTACGCTCAATTTaGCTTCTGAGCCTTGACGGTCAGTATCTCCAACCACCACTTGGC +
Preference number: 5 (lower is better)
Translates to: NNSCLLGSAEDLRSI*LLSLDGQYLQPPLG
Trigger: GCCAAGTGGTGGTTGGAGATACTGACCGTCAAGGCTCAGAAGCCAAATTGAGCGTAGGTCCTCTGCGCTGCCAAGGAGACAGGAATTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000636870.1
CDS CCA 90 bp AGTTCTGCTGGTCGGGAGCGTTGTCTACTCTGCTGCTGGAGTCTCTaGCATTTGTTGCTGGTGCCTGAAAGTTATATCGTAGCCACATCC +
Preference number: 5 (lower is better)
Translates to: SSAGRERCLLCCWSL*HLLLVPESYIVATS
Trigger: GGATGTGGCTACGATATAACTTTCAGGCACCAGCAACAAATGCCAGAGACTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636870.1
ENST00000637020.1
CDS CCA 90 bp AATGAGTTTTGTCTCCTTGGCAGCGCAGAGGACCTACGCTCAATTTaGCTTCTGAGCCTTGACGGTCAGTATCTCCAACCACCACTTGGC +
Preference number: 5 (lower is better)
Translates to: NEFCLLGSAEDLRSI*LLSLDGQYLQPPLG
Trigger: GCCAAGTGGTGGTTGGAGATACTGACCGTCAAGGCTCAGAAGCCAAATTGAGCGTAGGTCCTCTGCGCTGCCAAGGAGACAAAACTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637825.1
CDS-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCGTGAGCCGAGGCGTTaGTCTGCCTCAAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHREPRR*SASRRP
Trigger: AGGCCGCCTTGAGGCAGACAAACGCCTCGGCTCACG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCGTGAGCCGAGGCGTTaGTCTGCCTCAAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQREPRR*SASRRP
Trigger: AGGCCGCCTTGAGGCAGACAAACGCCTCGGCTCACG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTCCGACTCCGCCCCCTTaGCTTCGTTGGTATGGTAGG +
Preference number: 5 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLPTPPP*LRWYGR
Trigger: CCTACCATACCAACGAAGCAAAGGGGGCGGAGTCGG...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCAAAAACGTAGAAAACTaGCCCTGTTACCACGGGTCT +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSKNVEN*PCYHGS
Trigger: AGACCCGTGGTAACAGGGCAAGTTTTCTACGTTTTT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAAAAAGGAAGAGAATGTaGGGGGCCATCTGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATKRKRM*GAICRC
Trigger: GCACCTACAGATGGCCCCCAACATTCTCTTCCTTTT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTTTTTGAGCAGGTGGTaGAAAGCCACAAGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSFLSRW*KATRGN
Trigger: ATTTCCCCTTGTGGCTTTCAACCACCTGCTCAAAAA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS TCA 90 bp CCGATTGCCAAAGTCAACCTGAAGCCATTGATAATGGTCGCTGTCTaGTGGAGACCATCCCCCAGCACCTCCTCTCTTGTTTATCTTGGC +
Preference number: 5 (lower is better)
Translates to: PIAKVNLKPLIMVAV*WRPSPSTSSLVYLG
Trigger: GCCAAGATAAACAAGAGAGGAGGTGCTGGGGGATGGTCTCCATCAGACAGCGACCATTATCAATGGCTTCAGGTTGACTTTGGCAATCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000625365.2
ENST00000636561.1
ENST00000637150.1
ENST00000637694.1
ENST00000638117.1
CDS CCA 90 bp AGCATCCGGTATTGGGTCACCCAATCTGAGCTGCTATACCTTCCTTaGGTTGCAATGGCACTGATCTGCTTCCGATTGCCAAAGTCAACC +
Preference number: 5 (lower is better)
Translates to: SIRYWVTQSELLYLP*VAMALICFRLPKST
Trigger: GGTTGACTTTGGCAATCGGAAGCAGATCAGTGCCATTGCAACCCAAGGAAGGTATAGCAGCTCAGATTGGGTGACCCAATACCGGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000625365.2
ENST00000636561.1
ENST00000637150.1
ENST00000637694.1
ENST00000638117.1
CDS CCA 90 bp AGCTTGAGAAAGATGGTCTTCTCGTGGCGGGTGATGTTGACACTGTaGGGCTGTCCATTGGCCATGTTCCTGTGGTCTACGTCAATATTG +
Preference number: 5 (lower is better)
Translates to: SLRKMVFSWRVMLTL*GCPLAMFLWSTSIL
Trigger: CAATATTGACGTAGACCACAGGAACATGGCCAATGGACAGCCCCACAGTGTCAACATCACCCGCCACGAGAAGACCATCTTTCTCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000627772.2
ENST00000628930.2
ENST00000633326.1
ENST00000633544.1
ENST00000633607.1
ENST00000636870.1
ENST00000637020.1
CDS-3UTR CAA 90 bp GAAGCAACAGGTACCAGGTTTGTGATGAACCTGAGGTTCAAATGTGTCCGTCTTTGCCACTGGTCATCGTaGAGAGGGGTTGGTGACCTC +
Preference number: 5 (lower is better)
Translates to: EATGTRFVMNLRFKCVRLCHWSS*RGVGDL
Trigger: GAGGTCACCAACCCCTCTCAACGATGACCAGTGGCA...AAGACGGACACATTTGAACCTCAGGTTCATCACAAACCTGGTACCTGTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CAA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGTGCCTCAAGGCGGCCTaGAGAGGGGCGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQCLKAA*RGAIWL
Trigger: CAACCAGATCGCCCCTCTCAAGGCCGCCTTGAGGCA...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCGTGAGCCGAGGCGTTaGTCTGCCTCAAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSREPRR*SASRRP
Trigger: AGGCCGCCTTGAGGCAGACAAACGCCTCGGCTCACG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CAA 90 bp GGTAAGTGCAGAAGTAATACCTGTAAACCAGGTTTAAAAATCAGAAACACTTCTGGCGAGGCCCCGCAGTaGGACTCCACCAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: GKCRSNTCKPGLKIRNTSGEAPQ*DSTSSP
Trigger: GGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGCC...AGAAGTGTTTCTGATTTTTAAACCTGGTTTACAGGTATTACTTCTGCACTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAATGGTCTCTGTGAAGTaGGGGTCGTTGTTCATGATG +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATMVSVK*GSLFMM
Trigger: CATCATGAACAACGACCCCAACTTCACAGAGACCAT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCCATCAGGATTCCCTTTaGTTCTGTTACCTTGACTTG +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSHQDSL*FCYLDL
Trigger: CAAGTCAAGGTAACAGAACAAAAGGGAATCCTGATG...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAACACAACCTGAACACTaGCATGTTCAAGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATTQPEH*HVQVPQ
Trigger: CTGTGGGACTTGAACATGCAAGTGTTCAGGTTGTGT...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGAAAGAAAAGCTTCTaGACACAACCTGAACACTTG +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGKKSF*TQPEHL
Trigger: CAAGTGTTCAGGTTGTGTCAAGAAGCTTTTCTTTCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGCAGTGAGCCCGAGATaGCGCCAGTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSAVSPR*RQCTPA
Trigger: GGCTGGAGTGCACTGGCGCAATCTCGGGCTCACTGC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCGGGTTTCAAGGTATTTaGCAGTCAAGAATCAATGGC +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSGFQGI*QSRING
Trigger: GCCATTGATTCTTGACTGCAAAATACCTTGAAACCC...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCAATTTCTCTGTCCTTTaGCTATGTTGCATCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSNFSVL*LCCISQ
Trigger: CTGGGAGATGCAACATAGCAAAAGGACAGAGAAATT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS TCA 90 bp AATTCTCAAAGGAGGGAAGGAGGAAAGCGTTCTCCGATCAGTCTCTaGTCTTACCACGAGCAAGGCGTCCTTACGTCTTCTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: NSQRREGGKRSPISL*SYHEQGVLTSSLSH
Trigger: ATGCGAGAGAGAAGACGTAAGGACGCCTTGCTCGTGGTAAGATCAGAGACTGATCGGAGAACGCTTTCCTCCTTCCCTCCTTTGAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636242.1
CDS TCA 90 bp CAAGGCTGTCCAGATTCTTGGAGAGGAAAACTAGATATCACGTCTTaGTGGAGCAGTCACTTGGCTCTGGAAGCACAGGTGTCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: QGCPDSWRGKLDITS*WSSHLALEAQVSGE
Trigger: CTCTCCTGACACCTGTGCTTCCAGAGCCAAGTGACTGCTCCATCAAGACGTGATATCTAGTTTTCCTCTCCAAGAATCTGGACAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636988.1
CDS CCA 90 bp AGGGACAGCTTGACACGTAACATCAGAGAAGAATCTGGCCAGAGATaGCTGGACTTCAGGAGAAGATTACCTTCCCTCTCCATCCCCTTT +
Preference number: 5 (lower is better)
Translates to: RDSLTRNIREESGQR*LDFRRRLPSLSIPF
Trigger: AAAGGGGATGGAGAGGGAAGGTAATCTTCTCCTGAAGTCCAGCCATCTCTGGCCAGATTCTTCTCTGATGTTACGTGTCAAGCTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636399.1
CDS-3UTR CAA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCTGCTGGAGCTGGGCTaGCCAGAGAAAGGGATGCCT +
Preference number: 5 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQLLELG*PEKGMP
Trigger: AGGCATCCCTTTCTCTGGCAAGCCCAGCTCCAGCAG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTCGCCAGTTTTAACTaGAAGGGGACTATTAGTTCG +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLASFN*KGTISS
Trigger: CGAACTAATAGTCCCCTTCAAGTTAAAACTGGCGAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTCCTTCTGTTGGGGCCTaGCGGATCTGCTGCGGTAGC +
Preference number: 5 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSPSVGA*RICCGS
Trigger: GCTACCGCAGCAGATCCGCAAGGCCCCAACAGAAGG...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTGGGTGTGGCCTTCTGTaGGGGCCTTGCGGATCTGCT +
Preference number: 5 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSGCGLL*GPCGSA
Trigger: AGCAGATCCGCAAGGCCCCAACAGAAGGCCACACCC...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000628930.2
CDS-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACTGCTGGTCGGGAGCGTaGTCTACTCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHCWSGA*STLLLE
Trigger: CTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCA...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGCCTCAAGGCGGCCTaGAGAGGGGCGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSCLKAA*RGAIWL
Trigger: CAACCAGATCGCCCCTCTCAAGGCCGCCTTGAGGCA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTCCATTTCTTATAGCTaGGCCTTGTCCTGGATTATA +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSSISYS*ALSWII
Trigger: TATAATCCAGGACAAGGCCAAGCTATAAGAAATGGA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCATAGCCGAGTTTCTGTaGACTCCATTTCTTATAGCT +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSIAEFL*TPFLIA
Trigger: AGCTATAAGAAATGGAGTCAACAGAAACTCGGCTAT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp ATTTACAGGACACTGTCTATTAGGATTGTGTCACAGGGGTGGAAAAACTACCAGCCGACTCCGCCCCCTTaGCTTCGTTGGTATGGTAGG +
Preference number: 5 (lower is better)
Translates to: IYRTLSIRIVSQGWKNYQPTPPP*LRWYGR
Trigger: CCTACCATACCAACGAAGCAAAGGGGGCGGAGTCGG...CTGGTAGTTTTTCCACCCCTGTGACACAATCCTAATAGACAGTGTCCTGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCAAAAAGGAAGAGAATGTaGGGGGCCATCTGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSKRKRM*GAICRC
Trigger: GCACCTACAGATGGCCCCCAACATTCTCTTCCTTTT...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACACATTGTAACCCTCTaGAAGGAAGACAGTGTCCTA +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATHIVTL*KEDSVL
Trigger: TAGGACACTGTCTTCCTTCAAGAGGGTTACAATGTG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCAGGATCTCACTAACCTaGCATTCATTCAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSRISLT*HSFKVI
Trigger: GATGACTTTGAATGAATGCAAGGTTAGTGAGATCCT...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp TCGTTACACACCAGGTGCCATGCACTCTCTTCCTTCAACTGCTGGTATCAGTCACCTGGACCAGCTTTCTaGAGCTCTAGGGAATATGCT +
Preference number: 5 (lower is better)
Translates to: SLHTRCHALSSFNCWYQSPGPAF*SSREYA
Trigger: AGCATATTCCCTAGAGCTCAAGAAAGCTGGTCCAGG...TGACTGATACCAGCAGTTGAAGGAAGAGAGTGCATGGCACCTGGTGTGTAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACATTTTTGAGCAGGTGGTaGAAAGCCACAAGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATFLSRW*KATRGN
Trigger: ATTTCCCCTTGTGGCTTTCAACCACCTGCTCAAAAA...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS-3UTR CAA 90 bp GTGTGCTTGTTCCTGAAGTGCTTCCAATGGCTTCGCCTGTGCCCAGCTCTCAGCTGTTTCTTGGCCTACTaGAGAGGAACTTCCATATTT +
Preference number: 5 (lower is better)
Translates to: VCLFLKCFQWLRLCPALSCFLAY*RGTSIF
Trigger: AAATATGGAAGTTCCTCTCAAGTAGGCCAAGAAACA...GCTGAGAGCTGGGCACAGGCGAAGCCATTGGAAGCACTTCAGGAACAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000463592.3
ENST00000613345.2
ENST00000633607.1
CDS CCA 90 bp TGCCAGTGGTGGTCATCCAGCAAACTTCCTGTCATCACTGATGTGTaGCCATATATGGGGCCAAGCTGGTTGCTTCCTAAGTTTAAACTG +
Preference number: 5 (lower is better)
Translates to: CQWWSSSKLPVITDV*PYMGPSWLLPKFKL
Trigger: CAGTTTAAACTTAGGAAGCAACCAGCTTGGCCCCATATATGGCCACACATCAGTGATGACAGGAAGTTTGCTGGATGACCACCACTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361727.8
ENST00000636561.1
ENST00000636870.1
ENST00000637150.1
ENST00000637555.1
ENST00000637694.1
ENST00000637825.1
ENST00000638117.1
CDS CCA 90 bp AGAGAGAAGAGAAGCAGCTGGACGTTGGTGACTATGGTTAGACATTaGAGAGAAGCAGCTTCACTTCAGAGGGACAGCTTGACACGTAAC +
Preference number: 5 (lower is better)
Translates to: REKRSSWTLVTMVRH*REAASLQRDSLTRN
Trigger: GTTACGTGTCAAGCTGTCCCTCTGAAGTGAAGCTGCTTCTCTCCAATGTCTAACCATAGTCACCAACGTCCAGCTGCTTCTCTTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636399.1
CDS CCA 90 bp AGCAGTCACTTGGCTCTGGAAGCACAGGTGTCAGGAGAGCTTTTGTaGCAGCCGTCCTTGGAAAACACAATCTTCCAAATCTTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: SSHLALEAQVSGELL*QPSLENTIFQIFKR
Trigger: TCTCTTGAAGATTTGGAAGATTGTGTTTTCCAAGGACGGCTGCCACAAAAGCTCTCCTGACACCTGTGCTTCCAGAGCCAAGTGACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636988.1
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACAGGGTGTTCAACAATCTaGACATCTTGCAGAAATAGG +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATGCSTI*TSCRNR
Trigger: CCTATTTCTGCAAGATGTCAAGATTGTTGAACACCC...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CAA 90 bp AGAGGCTACTACCAGCATACTTGTGCTTGCTTGATAATGTATTGGAATGTAAGACCTTCTGTTGGGGCCTaGCGGATCTGCTGCGGTAGC +
Preference number: 5 (lower is better)
Translates to: RGYYQHTCACLIMYWNVRPSVGA*RICCGS
Trigger: GCTACCGCAGCAGATCCGCAAGGCCCCAACAGAAGG...TCTTACATTCCAATACATTATCAAGCAAGCACAAGTATGCTGGTAGTAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CAA 90 bp CTGAGCAGCTGTAGAGCCATGCCAGTAAGTCTCCAATTCCTGAACGTGGCCACACTCCATTTTCACAGTTaGTTCCATAGCTGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: LSSCRAMPVSLQFLNVATLHFHS*FHSWCN
Trigger: ATTGCACCAGCTATGGAACAAACTGTGAAAATGGAG...TGTGGCCACGTTCAGGAATTGGAGACTTACTGGCATGGCTCTACAGCTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361727.8
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTGCTGGTCGGGAGCGTaGTCTACTCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: YFKDVLKSMKQGAFVPFSCWSGA*STLLLE
Trigger: CTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCA...AGAGAAAGGGACAAAAGCACCCTGCTTCATACTCTTGAGCACATCCTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361727.8
ENST00000628930.2
ENST00000633544.1
ENST00000633607.1
CDS-3UTR CAA 90 bp GCACTTAGTTACTTAATACTTTATCCACCGTTTGGTTTCCTGTCTGATGGCCACCTGTGGGGCTGTCCATaGGCCATGTTCCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: ALSYLILYPPFGFLSDGHLWGCP*AMFLWS
Trigger: AGACCACAGGAACATGGCCAATGGACAGCCCCACAG...GTGGCCATCAGACAGGAAACCAAACGGTGGATAAAGTATTAAGTAACTAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361727.8
ENST00000633607.1
CDS-3UTR CAA 90 bp TATTTTAAGGATGTGCTCAAGAGTATGAAGCAGGGTGCTTTTGTCCCTTTCTCTTCGTGGCGGGTGATGTaGACACTGTGGGGCTGTCCA