RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000144619

Ensembl transcript IDs: ENST00000397459.6, ENST00000397461.5, ENST00000418658.6, ENST00000422330.5, ENST00000427331.5, ENST00000427741.5, ENST00000430505.6, ENST00000434053.5, ENST00000438282.6, ENST00000455083.5, ENST00000473058.1, ENST00000473173.1, ENST00000473845.1, ENST00000480113.1, ENST00000484686.1, ENST00000490876.1

Found 697 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTTGTCAGGCCCGGGTCTCCAGGAGAGCTGAGCAGTGGTATCTGTaGTTTCGTCTATTGTCACAGCCTCTGGGGGACCTGGAGGACCTC +
Preference number: 1 (lower is better)
Translates to: GCQARVSRRAEQWYL*FRLLSQPLGDLEDL
Trigger: GAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGACCCGGGCCTGACAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 90 bp GGGGTGCACGCTCTCATTCCTGAACACGTATCTAGAGGCATCAGCTaGGGCCAGCACTGTCAGCATCCAGATCATTTTACCGTAGGGCCG +
Preference number: 1 (lower is better)
Translates to: GVHALIPEHVSRGIS*GQHCQHPDHFTVGP
Trigger: CGGCCCTACGGTAAAATGATCTGGATGCTGACAGTGCTGGCCTCAGCTGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CCA 90 bp GTGGGGAGGCCCAGAAAACTTCAATATCTGTGGCAGAAAGACTTCTaGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAG +
Preference number: 1 (lower is better)
Translates to: VGRPRKLQYLWQKDF*QRYWLVVWWVLLLQ
Trigger: CTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTTTCTGGGCCTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CCA 90 bp CTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTaGCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGG +
Preference number: 1 (lower is better)
Translates to: LYSSPVGRPRKLQYL*QKDFWQRYWLVVWW
Trigger: CCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 90 bp TTCAGGGATGGGAATATTGCACAAGGTGCCTCTTGGGCAGTACATTaGGCTTTTGAGATTGCAGCCATTCCTGAAACCATCTCAAGTTGG +
Preference number: 1 (lower is better)
Translates to: FRDGNIAQGASWAVH*AFEIAAIPETISSW
Trigger: CCAACTTGAGATGGTTTCAGGAATGGCTGCAATCTCAAAAGCTCAATGTACTGCCCAAGAGGCACCTTGTGCAATATTCCCATCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR TCA 90 bp GATCATGCGTTACCTGGCACGGTAAAACAATACTCTCTCCAACAGTaGCATCCATACTGGAAGGGGGTACCATTACCCTTGTTGGATCTT +
Preference number: 1 (lower is better)
Translates to: DHALPGTVKQYSLQQ*HPYWKGVPLPLLDL
Trigger: AAGATCCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 90 bp TCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCCTTaGGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCTTG +
Preference number: 1 (lower is better)
Translates to: SSALTTRRVVCIQQP*VTDQVFRCSAMRSL
Trigger: CAAGGATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR CCA 90 bp AGAAAACTTCAATATCTGTGGCAGAAAGACTTCTGGCAAAGATACTaGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAATACACCACCG +
Preference number: 1 (lower is better)
Translates to: RKLQYLWQKDFWQRY*LVVWWVLLLQNTPP
Trigger: CGGTGGTGTATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 90 bp ATCAGGTGTCCATTAAATGACCAAGTAAACACGATGTCTAGCGAGTaGTCATGCGTTACCTGGCACGGTAAAACAATACTCTCTCCAACA +
Preference number: 1 (lower is better)
Translates to: IRCPLNDQVNTMSSE*SCVTWHGKTILSPT
Trigger: TGTTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 90 bp TTGTCTCTTTTCTTCCAGGCACATAGCAAGATTATATTTCCCTGCTaGGTTGCAGGAACATGTGACCTGTTTTGGCCAATGAAATGTGAG +
Preference number: 1 (lower is better)
Translates to: LSLFFQAHSKIIFPC*VAGTCDLFWPMKCE
Trigger: CTCACATTTCATTGGCCAAAACAGGTCACATGTTCCTGCAACTCAGCAGGGAAATATAATCTTGCTATGTGCCTGGAAGAAAAGAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473845.1
3UTR TCA 90 bp TACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATaGGATCCTTGTAAAACTGTACGAGTAATTTGCAATTTATTTACC +
Preference number: 1 (lower is better)
Translates to: YNSLELRTKSSAVLP*DPCKTVRVICNLFT
Trigger: GGTAAATAAATTGCAAATTACTCGTACAGTTTTACAAGGATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR CCA 90 bp ATATTTAACCTCATAACCTTGTATTCGTCCTCTATTCTTCTCCAGTaGGGAGGCCCAGAAAACTTCAATATCTGTGGCAGAAAGACTTCT +
Preference number: 1 (lower is better)
Translates to: IFNLITLYSSSILLQ*GGPENFNICGRKTS
Trigger: AGAAGTCTTTCTGCCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAATACAAGGTTATGAGGTTAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 90 bp AGTTCCAAAATGGTTAGTGGCTATACAGGTATAACTCCCAGCGTCTaGTTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAAAT +
Preference number: 1 (lower is better)
Translates to: SSKMVSGYTGITPSV*FSNVDDSEVSIFRN
Trigger: ATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGGGAGTTATACCTGTATAGCCACTAACCATTTTGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR TCA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTTGTTCTCCGTTTCTCTaGGGGGCGGCTGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: AERLLAKILAGGLVGSSSCSPFL*GAAGLP
Trigger: GGGGAGCCCAGCCGCCCCTCAGAGAAACGGAGAACA...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp AAGGGAGAGAAGGGGTGCACGCTCTCATTCCTGAACACGTATCTAGAGGCATCAATGGTGATGGGGCTGTaGTTGTCAGGCCCGGGTCTC +
Preference number: 2 (lower is better)
Translates to: KGEKGCTLSFLNTYLEASMVMGL*LSGPGL
Trigger: GAGACCCGGGCCTGACAACCACAGCCCCATCACCAT...TGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR TCA 90 bp TTCATATTCAACCCAAGGGTTCAAACCCACCACGGTCGCTGTGAATGTCTTCCCGTTCTGGGACTGTACTaGCTGCTTGCCAGCCCACGG +
Preference number: 2 (lower is better)
Translates to: FIFNPRVQTHHGRCECLPVLGLY*LLASPR
Trigger: CCGTGGGCTGGCAAGCAGTCAGTACAGTCCCAGAAC...GGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTGGGTTGAATATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTTATTGTCACAGCCTCTaGGGGACCTGGAGGACCTCT +
Preference number: 2 (lower is better)
Translates to: THHGRCECLPINEFWDCTYCHSL*GTWRTS
Trigger: AGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATA...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTCCAGCCCACGGAGAATaGAGTCCTGGCTTGAATGAC +
Preference number: 2 (lower is better)
Translates to: THHGRCECLPINEFWDCTPAHGE*SPGLND
Trigger: GTCATTCAAGCCAGGACTCCATTCTCCGTGGGCTGG...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR GCA 90 bp TTCATATTCAACCCAAGGGTTCAAACCCACCACGGTCGCTGTGAATGTCTTCCCACTGTACTGACTGCTTaGCAGCCCACGGAGAATGGA +
Preference number: 2 (lower is better)
Translates to: FIFNPRVQTHHGRCECLPTVLTA*QPTENG
Trigger: TCCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGT...GGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTGGGTTGAATATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAAAGCCTCTGGGGGACCTaGAGGACCTCTTACAATCAG +
Preference number: 2 (lower is better)
Translates to: RLLAKILAGGLVGSSSAESLWGT*RTSYNQ
Trigger: CTGATTGTAAGAGGTCCTCCAGGTCCCCCAGAGGCT...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp AAGGGAGAGAAGGGGTGCACGCTCTCATTCCTGAACACGTATCTAGAGGCATCACAATCCCAATCACGTTaGCTGCAACTGTGCGGAATT +
Preference number: 2 (lower is better)
Translates to: KGEKGCTLSFLNTYLEASQSQSR*LQLCGI
Trigger: AATTCCGCACAGTTGCAGCCAACGTGATTGGGATTG...TGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR GCA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGGGTGGGTTCTTCTTCTaGAGAATACACCACCGTGGT +
Preference number: 2 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWGGFFF*RIHHRG
Trigger: ACCACGGTGGTGTATTCTGCAGAAGAAGAACCCACC...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR GCA 90 bp CAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCGTTGGCTGCAACTGTaGGGAATTCATATTCAACCC +
Preference number: 2 (lower is better)
Translates to: QKDFWQRYWLVVWWVLLLRWLQL*GIHIQP
Trigger: GGGTTGAATATGAATTCCGCACAGTTGCAGCCAACG...CAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR GCA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGCCCAATCACGTTGGCTaGAACTGTGCGGAATTCATA +
Preference number: 2 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWPNHVG*NCAEFI
Trigger: TATGAATTCCGCACAGTTGCAGCCAACGTGATTGGG...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR TCA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTAATGGAGTCCTGGCTTaGATGACATACATGGTGATG +
Preference number: 2 (lower is better)
Translates to: AERLLAKILAGGLVGSSSNGVLA*MTYMVM
Trigger: CATCACCATGTATGTCATTCAAGCCAGGACTCCATT...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTCTGTCCACACTTGTTTaGACCATGCAGACATATTTC +
Preference number: 2 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTALSTLV*TMQTYF
Trigger: GAAATATGTCTGCATGGTCCAAACAAGTGTGGACAG...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CAA 90 bp ATGGGAATATTGCACAAGGTGCCTCTTGGGCAGTACATTGAGCTTTaGAGATTGCAGCCATTCCTGAAACCATCTCAAGTTGGGTTGAAC +
Preference number: 2 (lower is better)
Translates to: MGILHKVPLGQYIEL*RLQPFLKPSQVGLN
Trigger: GTTCAACCCAACTTGAGATGGTTTCAGGAATGGCTGCAATCTCAAAAGCTCAATGTACTGCCCAAGAGGCACCTTGTGCAATATTCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTCAGGTGTCCATTAAATaGCCAAGTAAACACGATGTC +
Preference number: 2 (lower is better)
Translates to: AERLLAKILAGGLVGSSSQVSIK*PSKHDV
Trigger: GACATCGTGTTTACTTGGTCATTTAATGGACACCTG...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTACAGATGTCTTCAGTaGATTGCAGAGTTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIYRCLQ*IAEFPK
Trigger: CTTTGGAAACTCTGCAATGCACTGAAGACATCTGTA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CCA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTTTTTGGAGACGCTTTTaGCTTACACTCAATGACAAC +
Preference number: 2 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTAFWRRF*LTLNDN
Trigger: GTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAA...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTGGTGTAAACAGGTTTTaGAGACGCTTTTGGCTTACA +
Preference number: 2 (lower is better)
Translates to: PACFSWMFRIIKSPAESPGVNRF*RRFWLT
Trigger: TGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACC...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGCCAGCATGCTTCAGTTaGATGTTTCGGATCATCAAA +
Preference number: 2 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWPACFS*MFRIIK
Trigger: TTTGATGATCCGAAACATCCAACTGAAGCATGCTGG...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR TCA 90 bp TGTCTAGCGAGTGATCATGCGTTACCTGGCACGGTAAAACAATACTCTCTCCAAGTTCCTTGCTCAATTTaGATTCTATCCCGAGTTAGC +
Preference number: 2 (lower is better)
Translates to: CLASDHALPGTVKQYSLQVPCSI*ILSRVS
Trigger: GCTAACTCGGGATAGAATTCAAATTGAGCAAGGAAC...TTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR TCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTATACATGCCAGCATCTaGGAGGTTCACTATTGTTAT +
Preference number: 2 (lower is better)
Translates to: PACFSWMFRIIKSPAESPIHASI*EVHYCY
Trigger: ATAACAATAGTGAACCTCTCAGATGCTGGCATGTAT...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR TCA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAAATAACTCCCAGCGTCTaGTTTAGTAACGTTGATGAT +
Preference number: 2 (lower is better)
Translates to: RLLAKILAGGLVGSSSAEITPSV*FSNVDD
Trigger: ATCATCAACGTTACTAAATCAGACGCTGGGAGTTAT...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR GCA 90 bp CTGTGGCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTTATAACACTAAGCTCTaGGTTGGAAAAGATAACTCC +
Preference number: 2 (lower is better)
Translates to: LWQKDFWQRYWLVVWWVLYNTKL*VGKDNS
Trigger: GGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATA...AAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTTACCATTACCCTTGTTaGATCTTTCACTACCAAGTT +
Preference number: 2 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTAYHYPC*IFHYQV
Trigger: AACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTA...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CCA 90 bp ACTCTCTCCAACAGTGACATCCATACTGGAAGGGGGTACCATTACCCTTGTTGGAGACATTTTCTTCCATaGCCACGTGAATATCATTTA +
Preference number: 2 (lower is better)
Translates to: TLSNSDIHTGRGYHYPCWRHFLP*PREYHL
Trigger: TAAATGATATTCACGTGGCCATGGAAGAAAATGTCT...CCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATGCATACAACAGCCTTaGGTTACGGACCAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTCIQQP*VTDQVF
Trigger: GAAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTCCGCTGTTCTGCCATaGGATCCTTGTAAAACTGTA +
Preference number: 2 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHSAVLP*DPCKTV
Trigger: TACAGTTTTACAAGGATCTCATGGCAGAACAGCGGA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTGCATACAACAGCCTTaGGTTACGGACCAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: KAYKATRLPIAKQNHQETCIQQP*VTDQVF
Trigger: GAAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGATTGCAGCCATTCCTaGAACCATCTCAAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEDCSHS*NHLKLG
Trigger: ACCCAACTTGAGATGGTTTCAGGAATGGCTGCAATC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATCTTGGGCAGTACATTaGGCTTTTGAGATTGCAGCC +
Preference number: 2 (lower is better)
Translates to: AYKATRLPIAKQNHQETISWAVH*AFEIAA
Trigger: GGCTGCAATCTCAAAAGCTCAATGTACTGCCCAAGA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp TGCTTTACATTCCCAAAAGACATTTTCTTCCATGGCCACGTGAATATCATTTATCCAGCATCCTCCTGCTaGAAATTAGGGATCTCAAGA +
Preference number: 2 (lower is better)
Translates to: CFTFPKDIFFHGHVNIIYPASSC*KLGISR
Trigger: TCTTGAGATCCCTAATTTTCAGCAGGAGGATGCTGG...ATAAATGATATTCACGTGGCCATGGAAGAAAATGTCTTTTGGGAATGTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR GCA 90 bp CCAGCGTCTGATTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAAATGCTTAGGCCTTCCATTTaGTTTACATTCCCAAAAGAC +
Preference number: 2 (lower is better)
Translates to: PASDLVTLMILRFPSSEMLRPSI*FTFPKD
Trigger: GTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAG...CATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTCCGCTGTTCTGCCATaGGATCCTTGTAAAACTGTA +
Preference number: 2 (lower is better)
Translates to: KAYKATRLPIAKQNHQETSAVLP*DPCKTV
Trigger: TACAGTTTTACAAGGATCTCATGGCAGAACAGCGGA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR GCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATACAGATGTCTTCAGTaGATTGCAGAGTTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTYRCLQ*IAEFPK
Trigger: CTTTGGAAACTCTGCAATGCACTGAAGACATCTGTA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR GCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGAGTCTTCCGCTGTTCTaGCATGAGATCCTTGTAAAA +
Preference number: 2 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKSLPLF*HEILVK
Trigger: TTTTACAAGGATCTCATGGCAGAACAGCGGAAGACT...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCATCTCAAGTTGGGTTaGACAACAAAATTCACAACG +
Preference number: 2 (lower is better)
Translates to: KAYKATRLPIAKQNHQETHLKLG*TTKFTT
Trigger: CGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGCAGCAACTATTTGTTaGAATAGGAGCAATCTTCCA +
Preference number: 2 (lower is better)
Translates to: KAYKATRLPIAKQNHQETAATIC*NRSNLP
Trigger: TGGAAGATTGCTCCTATTTCAACAAATAGTTGCTGC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGCAGCAACTATTTGTTaGAATAGGAGCAATCTTCCA +
Preference number: 2 (lower is better)
Translates to: AYKATRLPIAKQNHQETIAATIC*NRSNLP
Trigger: TGGAAGATTGCTCCTATTTCAACAAATAGTTGCTGC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATACAGATGTCTTCAGTaGATTGCAGAGTTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: AYKATRLPIAKQNHQETIYRCLQ*IAEFPK
Trigger: CTTTGGAAACTCTGCAATGCACTGAAGACATCTGTA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGAAACCATCTCAAGTTaGGTTGAACAACAAAATTCA +
Preference number: 2 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHETISS*VEQQNS
Trigger: TGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGAAACCATCTCAAGTTaGGTTGAACAACAAAATTCA +
Preference number: 2 (lower is better)
Translates to: AYKATRLPIAKQNHQETIETISS*VEQQNS
Trigger: TGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR TCA 72 bp GCCCGGGTCTCCAGGAGAGCTGAGCAGTGGTATCTGTaGTTTCGTCTATTGTCACAGCCTCTGGGGGACCTG +
Preference number: 3 (lower is better)
Translates to: ARVSRRAEQWYL*FRLLSQPLGDL
Trigger: CAGGTCCCCCAGAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGACCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CCA 72 bp TTCAGATTTGCTGCCTCCGCCACCACTGACATTCGCTaGTGTGACTTCGGGGAGAGCTTCTTCTGTTCTCCG +
Preference number: 3 (lower is better)
Translates to: FRFAASATTDIR*CDFGESFFCSP
Trigger: CGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGGCGGAGGCAGCAAATCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CCA 72 bp AGAACCCATGCATGTTTGGCTCTTTTCCTTCTGCAATaGCAACGTCCAGAGCATCTTGGTCCACCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: RTHACLALFLLQ*QRPEHLGPPGW
Trigger: CCAGCCTGGTGGACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
3UTR-3UTR CAA 90 bp CCACCACTGACATTCGCTGGTGTGACTTCGGGGAGAGCTTCTTCTGTTCTCCGTCCCAGCATGCTTCAGTaGGATGTTTCGGATCATCAA +
Preference number: 3 (lower is better)
Translates to: PPLTFAGVTSGRASSVLRPSMLQ*DVSDHQ
Trigger: TTGATGATCCGAAACATCCAACTGAAGCATGCTGGG...ACGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CCA 72 bp AGTGGTATCTGTGATTTCGTCTATTGTCACAGCCTCTaGGGGACCTGGAGGACCTCTTACAATCAGGTCTGC +
Preference number: 3 (lower is better)
Translates to: SGICDFVYCHSL*GTWRTSYNQVC
Trigger: GCAGACCTGATTGTAAGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATAGACGAAATCACAGATACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CCA 72 bp TCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTaGCAGAAAGACTTCTGGCAAAGATACTGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: SPVGRPRKLQYL*QKDFWQRYWLV
Trigger: CACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CCA 72 bp TGTGGCAGAAAGACTTCTGGCAAAGATACTGGCTGGTaGTTTGGTGGGTTCTTCTTCTGCAGAATACACCAC +
Preference number: 3 (lower is better)
Translates to: CGRKTSGKDTGW*FGGFFFCRIHH
Trigger: GTGGTGTATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTAGGTGTAAACAGGTTTaGGAGACGCTTTTGGCTTAC +
Preference number: 3 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTRCKQV*ETLLAY
Trigger: GTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCT...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAAGGGGTACCATTACCCTaGTTGGATCTTTCACTACCA +
Preference number: 3 (lower is better)
Translates to: RLLAKILAGGLVGSSSAEGVPLP*LDLSLP
Trigger: TGGTAGTGAAAGATCCAACAAGGGTAATGGTACCCC...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAAATAGCCTGTCCACACTaGTTTGGACCATGCAGACAT +
Preference number: 3 (lower is better)
Translates to: RLLAKILAGGLVGSSSAEIACPH*FGPCRH
Trigger: ATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTAT...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTACTTCACCTCCCACTTaGACAAGAGTTACTCTTTTC +
Preference number: 3 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTATSPPT*TRVTLF
Trigger: GAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGT...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAAGAATGGAGTCCTGGCTaGAATGACATACATGGTGAT +
Preference number: 3 (lower is better)
Translates to: RLLAKILAGGLVGSSSAEEWSPG*NDIHGD
Trigger: ATCACCATGTATGTCATTCAAGCCAGGACTCCATTC...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGGGCCTTCTCCTTTGTaGTTGAAGACACCTACTTTA +
Preference number: 3 (lower is better)
Translates to: AERLLAKILAGGLVGSSSGPSPL*LKTPTL
Trigger: TAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCC...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAAAAAGGGCCTTCTCCTTaGTTGTTGAAGACACCTACT +
Preference number: 3 (lower is better)
Translates to: RLLAKILAGGLVGSSSAEKGPSP*LLKTPT
Trigger: AGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTT...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 72 bp GGGAATATTGCACAAGGTGCCTCTTGGGCAGTACATTaGGCTTTTGAGATTGCAGCCATTCCTGAAACCATC +
Preference number: 3 (lower is better)
Translates to: GNIAQGASWAVH*AFEIAAIPETI
Trigger: GATGGTTTCAGGAATGGCTGCAATCTCAAAAGCTCAATGTACTGCCCAAGAGGCACCTTGTGCAATATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR CCA 72 bp ATCTGTGGCAGAAAGACTTCTGGCAAAGATACTGGCTaGTGGTTTGGTGGGTTCTTCTTCTGCAGAATACAC +
Preference number: 3 (lower is better)
Translates to: ICGRKTSGKDTG*WFGGFFFCRIH
Trigger: GTGTATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp TTCATATTCAACCCAAGGGTTCAAACCCACCACGGTCGCTGTGAATGTCTTCCCTCTCAAGAATTCCATTaGACTTGTGTCTTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: FIFNPRVQTHHGRCECLPSQEFH*TCVFWL
Trigger: AAGCCAGAAGACACAAGTCAAATGGAATTCTTGAGA...GGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTGGGTTGAATATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGGTACCATTACCCTTGTaGGATCTTTCACTACCAAGT +
Preference number: 3 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWVPLPL*DLSLPS
Trigger: ACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTAC...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 72 bp TTAACCACTAGAAGAGTAGTTTGCATACAACAGCCTTaGGTTACGGACCAAGTCTTCCGCTGTTCTGCCATG +
Preference number: 3 (lower is better)
Translates to: LTTRRVVCIQQP*VTDQVFRCSAM
Trigger: CATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCAAACTACTCTTCTAGTGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR CCA 72 bp CCCAGAAAACTTCAATATCTGTGGCAGAAAGACTTCTaGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTT +
Preference number: 3 (lower is better)
Translates to: PRKLQYLWQKDF*QRYWLVVWWVL
Trigger: AAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTTTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp ACTCTCTCCAACAGTGACATCCATACTGGAAGGGGGTACCATTACCCTTGTTGGTCTGATTTAGTAACGTaGATGATTCTGAGGTTTCCA +
Preference number: 3 (lower is better)
Translates to: TLSNSDIHTGRGYHYPCWSDLVT*MILRFP
Trigger: TGGAAACCTCAGAATCATCAACGTTACTAAATCAGA...CCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR GCA 72 bp AGTGTTGCACTTCTAAGTAGAGGCTTTAAGAACCCATaGATGTTTGGCTCTTTTCCTTCTGCAATGGCAACG +
Preference number: 3 (lower is better)
Translates to: SVALLSRGFKNP*MFGSFPSAMAT
Trigger: CGTTGCCATTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTCTTAAAGCCTCTACTTAGAAGTGCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
3UTR-3UTR CAA 90 bp GGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTCCAACTCTTTCAAAGTACACTAAGCTCTGCGTaGGAAAAGATAACTCCATGT +
Preference number: 3 (lower is better)
Translates to: GCFGSSNHQLNPLQLFQSTLSSA*EKITPC
Trigger: ACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGT...ACTTTGAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR TCA 72 bp CCATTAAATGACCAAGTAAACACGATGTCTAGCGAGTaGTCATGCGTTACCTGGCACGGTAAAACAATACTC +
Preference number: 3 (lower is better)
Translates to: PLNDQVNTMSSE*SCVTWHGKTIL
Trigger: GAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACATCGTGTTTACTTGGTCATTTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTCAGGGATGGGAATATaGCACAAGGTGCCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: KAYKATRLPIAKQNHQETSGMGI*HKVPLG
Trigger: CCCAAGAGGCACCTTGTGCAATATTCCCATCCCTGA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR TCA 72 bp ATGGTTAGTGGCTATACAGGTATAACTCCCAGCGTCTaGTTTAGTAACGTTGATGATTCTGAGGTTTCCATC +
Preference number: 3 (lower is better)
Translates to: MVSGYTGITPSV*FSNVDDSEVSI
Trigger: GATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGGGAGTTATACCTGTATAGCCACTAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATGCACAAGGTGCCTCTaGGGCAGTACATTGAGCTTT +
Preference number: 3 (lower is better)
Translates to: GKAYKATRLPIAKQNHQECTRCL*GSTLSF
Trigger: AAAGCTCAATGTACTGCCCAAGAGGCACCTTGTGCA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp GGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTCCAACTCTTTCAAAGTTTTTCAAGAGTGTTCTaGAAAAATCTGGACCTACAG +
Preference number: 3 (lower is better)
Translates to: GCFGSSNHQLNPLQLFQSFSRVF*KNLDLQ
Trigger: CTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAA...ACTTTGAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR-3UTR CAA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAGATGTCTTCAGTGCATaGCAGAGTTTCCAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTDVFSA*QSFQRN
Trigger: GTTTCTTTGGAAACTCTGCAATGCACTGAAGACATC...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR CCA 72 bp TTTGAGATTGCAGCCATTCCTGAAACCATCTCAAGTTaGGTTGAACAACAAAATTCACAACGGCATGAAAAC +
Preference number: 3 (lower is better)
Translates to: FEIAAIPETISS*VEQQNSQRHEN
Trigger: GTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAGGAATGGCTGCAATCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAAATTGCATGATTGTGTaGCCCATAGCATTTTACAGC +
Preference number: 3 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTNCMIV*PIAFYS
Trigger: GCTGTAAAATGCTATGGGCAACACAATCATGCAATT...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATTGCATACAACAGCCTaGAGTTACGGACCAAGTCTT +
Preference number: 3 (lower is better)
Translates to: GKAYKATRLPIAKQNHQELHTTA*SYGPSL
Trigger: AAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCAA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACATTGAGCTTTTGAGATaGCAGCCATTCCTGAAACCA +
Preference number: 3 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHIELLR*QPFLKP
Trigger: TGGTTTCAGGAATGGCTGCAATCTCAAAAGCTCAAT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCAGTACATTGAGCTTTaGAGATTGCAGCCATTCCTG +
Preference number: 3 (lower is better)
Translates to: KAYKATRLPIAKQNHQETQYIEL*RLQPFL
Trigger: CAGGAATGGCTGCAATCTCAAAAGCTCAATGTACTG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACAGTACATTGAGCTTTaGAGATTGCAGCCATTCCTG +
Preference number: 3 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEQYIEL*RLQPFL
Trigger: CAGGAATGGCTGCAATCTCAAAAGCTCAATGTACTG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGATGTCTTCAGTGCATaGCAGAGTTTCCAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: AYKATRLPIAKQNHQETIDVFSA*QSFQRN
Trigger: GTTTCTTTGGAAACTCTGCAATGCACTGAAGACATC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGATGTCTTCAGTGCATaGCAGAGTTTCCAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEDVFSA*QSFQRN
Trigger: GTTTCTTTGGAAACTCTGCAATGCACTGAAGACATC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAATTGAGCTTTTGAGATaGCAGCCATTCCTGAAACCA +
Preference number: 3 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEIELLR*QPFLKP
Trigger: TGGTTTCAGGAATGGCTGCAATCTCAAAAGCTCAAT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAAATTGCATGATTGTGTaGCCCATAGCATTTTACAGC +
Preference number: 3 (lower is better)
Translates to: AYKATRLPIAKQNHQETINCMIV*PIAFYS
Trigger: GCTGTAAAATGCTATGGGCAACACAATCATGCAATT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
3UTR-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTTGACTATAGTAACTTaGGGTCTATGTTACTACAGG +
Preference number: 3 (lower is better)
Translates to: KAYKATRLPIAKQNHQETLTIVT*GLCYYR
Trigger: CCTGTAGTAACATAGACCCAAAGTTACTATAGTCAA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp TCTCCAGGAGAGCTGAGCAGTGGTATCTGTGATTTCGTCTATTGTCACAGCCTCTGTTCTCCGTTTCTCTaGGGGGCGGCTGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SPGELSSGICDFVYCHSLCSPFL*GAAGLP
Trigger: GGGGAGCCCAGCCGCCCCTCAGAGAAACGGAGAACA...GAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp GGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTCCAACTCTTTCAAAGTGGCGAGAGCCTCGGGTaGGGCGCCGGCACAGTCCGA +
Preference number: 4 (lower is better)
Translates to: GCFGSSNHQLNPLQLFQSGESLG*GAGTVR
Trigger: TCGGACTGTGCCGGCGCCGCACCCGAGGCTCTCGCC...ACTTTGAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGCCACCGTGGTGGGACTaGAAGGGCCTTCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PTTVAVNVFPSMSSGTVLPPWWD*KGLLLC
Trigger: ACAAAGGAGAAGGCCCTTTCAGTCCCACCACGGTGG...CAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CCACCACTGACATTCGCTGGTGTGACTTCGGGGAGAGCTTCTTCTGTTCTCCGTAGCCTCTGGGGGACCTaGAGGACCTCTTACAATCAG +
Preference number: 4 (lower is better)
Translates to: PPLTFAGVTSGRASSVLRSLWGT*RTSYNQ
Trigger: CTGATTGTAAGAGGTCCTCCAGGTCCCCCAGAGGCT...ACGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTTCTCTGAGGGGCGGCTaGGCTCCCCAATCCCAATCA +
Preference number: 4 (lower is better)
Translates to: THHGRCECLPINEFWDCTSLRGG*APQSQS
Trigger: TGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGA...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CCACCACTGACATTCGCTGGTGTGACTTCGGGGAGAGCTTCTTCTGTTCTCCGTAGTAGCACCATTCCTTaGCCTCGACGGACAGACACA +
Preference number: 4 (lower is better)
Translates to: PPLTFAGVTSGRASSVLRSSTIP*PRRTDT
Trigger: TGTGTCTGTCCGTCGAGGTCAAGGAATGGTGCTACT...ACGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTCTCTGCTGCGGGCTGTaGCTGGGCTGTCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: THHGRCECLPINEFWDCTLCCGL*LGCQKK
Trigger: TTTCTTCTGACAGCCCAGTCACAGCCCGCAGCAGAG...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp ACTCTCTCCAACAGTGACATCCATACTGGAAGGGGGTACCATTACCCTTGTTGGATGGTGATGGGGCTGTaGTTGTCAGGCCCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TLSNSDIHTGRGYHYPCWMVMGL*LSGPGL
Trigger: GAGACCCGGGCCTGACAACCACAGCCCCATCACCAT...CCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTCTCTGAGGGGCGGCTaGGCTCCCCAATCCCAATCA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEISLRGG*APQSQS
Trigger: TGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTCCAACTCTTTCAAAGTCTAAGAGCAGGCACCTaGCCTGTCGCTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GCFGSSNHQLNPLQLFQSLRAGT*PVARRR
Trigger: GCGGCGGCGAGCGACAGGCCAGGTGCCTGCTCTTAG...ACTTTGAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTACCAGTCGGAGGAGCTaGCTTGAAGGCTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PACFSWMFRIIKSPAESPTSRRS*LEGFPQ
Trigger: CTGCGGGAAGCCTTCAAGTCAGCTCCTCCGACTGGT...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTCGAAAGCTCCCTACTTaGAGCCAATCCTGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: THHGRCECLPINEFWDCTRKLPT*SQSWRR
Trigger: TCGACGCCAGGATTGGCTGCAAGTAGGGAGCTTTCG...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp AAGGGAGAGAAGGGGTGCACGCTCTCATTCCTGAACACGTATCTAGAGGCATCACGGTTCCTTGTTTTGTaGCTGCCTCGCAGCGCAACA +
Preference number: 4 (lower is better)
Translates to: KGEKGCTLSFLNTYLEASRFLVL*LPRSAT
Trigger: TGTTGCGCTGCGAGGCAGCCACAAAACAAGGAACCG...TGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAATCGGAGGAGCTGACTTaGAGGCTTCCCGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: RLLAKILAGGLVGSSSAESEELT*RLPAAF
Trigger: GAATGCTGCGGGAAGCCTTCAAGTCAGCTCCTCCGA...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTGGGACTGTACTGACTaGTTGCCAGCCCACGGAGAA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIWDCTD*LPAHGE
Trigger: TTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTCCCA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCGAAAGCTCCCTACTTaGAGCCAATCCTGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIRKLPT*SQSWRR
Trigger: TCGACGCCAGGATTGGCTGCAAGTAGGGAGCTTTCG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418658.6
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCCAGCCCACGGAGAATaGAGTCCTGGCTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIPAHGE*SPGLND
Trigger: GTCATTCAAGCCAGGACTCCATTCTCCGTGGGCTGG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTCCAGCCCACGGAGAATaGAGTCCTGGCTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTPAHGE*SPGLND
Trigger: GTCATTCAAGCCAGGACTCCATTCTCCGTGGGCTGG...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTTCTAGAGGCATCAGCTaGGGCCAGCACTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PACFSWMFRIIKSPAESPSRGIS*GQHCQH
Trigger: ATGCTGACAGTGCTGGCCTCAGCTGATGCCTCTAGA...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTTGGGACTGTACTGACTaGTTGCCAGCCCACGGAGAA +
Preference number: 4 (lower is better)
Translates to: PACFSWMFRIIKSPAESPWDCTD*LPAHGE
Trigger: TTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTCCCA...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTGTCACATTGACTGTTaGACTAGAGGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEICHIDC*TRGACP
Trigger: GGGACAGGCCCCTCTAGTGCAACAGTCAATGTGACA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGGGCGAGAGCCTCGGGTaGGGCGCCGGCACAGTCCGA +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKGESLG*GAGTVR
Trigger: TCGGACTGTGCCGGCGCCGCACCCGAGGCTCTCGCC...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418658.6
CDS-3UTR CCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTTATTGTCACAGCCTCTaGGGGACCTGGAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: PACFSWMFRIIKSPAESPYCHSL*GTWRTS
Trigger: AGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATA...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTTACTGGCTGGTGGTTTaGTGGGTTCTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: THHGRCECLPINEFWDCTYWLVV*WVLLLQ
Trigger: CTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTA...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGACGATGTCTAGCGAGTaGTCATGCGTTACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWTMSSE*SCVTWH
Trigger: GTGCCAGGTAACGCATGATCACTCGCTAGACATCGT...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCACCGTTGCTCCTTTTaGAGTCGGAACTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIHRCSF*SRNCFW
Trigger: CCAGAAACAGTTCCGACTGCAAAAGGAGCAACGGTG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGGTGGGTTCTTCTTCTaGAGAATACACCACCGTGGT +
Preference number: 4 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTGGFFF*RIHHRG
Trigger: ACCACGGTGGTGTATTCTGCAGAAGAAGAACCCACC...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTTCCTTGTTTTGTGGCTaGCTCGCAGCGCAACAAACT +
Preference number: 4 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTASLFCG*LAAQQT
Trigger: AGTTTGTTGCGCTGCGAGGCAGCCACAAAACAAGGA...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTTCGGGCCATGCAGTGTaGAATCATCTGCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: AERLLAKILAGGLVGSSSSGHAV*NHLQGT
Trigger: TGTGCCTTGCAGATGATTCCACACTGCATGGCCCGA...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGGCCCCAGGACCTTGTaGTTTGTCACGGTATTGGTA +
Preference number: 4 (lower is better)
Translates to: AERLLAKILAGGLVGSSSGPRTL*FVTVLV
Trigger: TACCAATACCGTGACAAACCACAAGGTCCTGGGGCC...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CCACCACTGACATTCGCTGGTGTGACTTCGGGGAGAGCTTCTTCTGTTCTCCGTTTGACTTGTGTCTTCTaGCTTTCCTTGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: PPLTFAGVTSGRASSVLRLTCVF*LSLLLA
Trigger: AGCCAATAGCAAGGAAAGCCAGAAGACACAAGTCAA...ACGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCCAGCATCCTCCTGCTaGAAATTAGGGATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIPASSC*KLGISR
Trigger: TCTTGAGATCCCTAATTTTCAGCAGGAGGATGCTGG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTCCAGCATCCTCCTGCTaGAAATTAGGGATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTAPASSC*KLGISR
Trigger: TCTTGAGATCCCTAATTTTCAGCAGGAGGATGCTGG...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CTGTCAAAGTCTATCAGGTGTCCATTAAATGACCAAGTAAACACGATGTCTAGCGTTCTGGGACTGTACTaGCTGCTTGCCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: LSKSIRCPLNDQVNTMSSVLGLY*LLASPR
Trigger: CCGTGGGCTGGCAAGCAGTCAGTACAGTCCCAGAAC...GCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTGTTCTCCGTTTCTCTaGGGGGCGGCTGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHCSPFL*GAAGLP
Trigger: GGGGAGCCCAGCCGCCCCTCAGAGAAACGGAGAACA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTGCATACAACAGCCTTaGGTTACGGACCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEICIQQP*VTDQVF
Trigger: GAAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTCTTGGGCAGTACATTaGGCTTTTGAGATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEISWAVH*AFEIAA
Trigger: GGCTGCAATCTCAAAAGCTCAATGTACTGCCCAAGA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp TTCATATTCAACCCAAGGGTTCAAACCCACCACGGTCGCTGTGAATGTCTTCCCCATCAAATCACCAGCTaGATCCCCTCCAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: FIFNPRVQTHHGRCECLPHQITS*IPSNSF
Trigger: GAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATG...GGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTGGGTTGAATATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTACGAGTTTGTCGCTGTaGACTGGTACGTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AERLLAKILAGGLVGSSSTSLSL*TGTFQH
Trigger: ATGCTGGAACGTACCAGTGCACAGCGACAAACTCGT...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTCACCAGCTGAATCCTaGCCTCCAACTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEISPAES*PPTLSK
Trigger: CTTTGAAAGAGTTGGAGGGCAGGATTCAGCTGGTGA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CCAGCGTCTGATTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAAATGCTCAGCTCTCCAGAATaGGGTGGCGGGCCACACAGT +
Preference number: 4 (lower is better)
Translates to: PASDLVTLMILRFPSSEMLSSPE*GGGPHS
Trigger: ACTGTGTGGCCCGCCACCCCATTCTGGAGAGCTGAG...CATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGCTGTCCACACTTGTTTaGACCATGCAGACATATTTC +
Preference number: 4 (lower is better)
Translates to: PTTVAVNVFPSMSSGTVLLSTLV*TMQTYF
Trigger: GAAATATGTCTGCATGGTCCAAACAAGTGTGGACAG...CAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTCCCATCAATGAGTTCTaGGACTGTACTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTAPINEF*DCTDCL
Trigger: CAAGCAGTCAGTACAGTCCCAGAACTCATTGATGGG...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CTGTGGCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCAATCCCAATCACGTTaGCTGCAACTGTGCGGAATT +
Preference number: 4 (lower is better)
Translates to: LWQKDFWQRYWLVVWWVLQSQSR*LQLCGI
Trigger: AATTCCGCACAGTTGCAGCCAACGTGATTGGGATTG...AAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTGGCTGGTGGTTTGGTaGGTTCTTCTTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIWLVVW*VLLLQN
Trigger: ATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTAAAGATACTGGCTGGTaGTTTGGTGGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: THHGRCECLPINEFWDCTKDTGW*FGGFFF
Trigger: GAAGAAGAACCCACCAAACCACCAGCCAGTATCTTT...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTGGCAGAAAGACTTCTaGCAAAGATACTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIWQKDF*QRYWLV
Trigger: CACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATTACCCTTGTTGGATCTTTCACTACCAAGTTTCCAGTACTGCTAGCAGTTCCAGCTGCGGGCTGTGACTaGGCTGTCAGAAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: ITLVGSFTTKFPVLLAVPAAGCD*AVRRKA
Trigger: GGCTTTTCTTCTGACAGCCCAGTCACAGCCCGCAGC...TGGAACTGCTAGCAGTACTGGAAACTTGGTAGTGAAAGATCCAACAAGGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp GTAGAGGCTTTAAGAACCCATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAAACGTCCAGAGCATCTTaGTCCACCAGGCTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: VEALRTHACLALFLLQWQTSRAS*STRLAL
Trigger: TAAGGCCAGCCTGGTGGACCAAGATGCTCTGGACGT...TTGCCATTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTCTTAAAGCCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR TCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCTGCAAGGCACAAAATaGATGATTGCAGTACCAGCA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEILQGTK*MIAVPA
Trigger: TGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp TCTCCAGGAGAGCTGAGCAGTGGTATCTGTGATTTCGTCTATTGTCACAGCCTCCTGCAAGGCACAAAATaGATGATTGCAGTACCAGCA +
Preference number: 4 (lower is better)
Translates to: SPGELSSGICDFVYCHSLLQGTK*MIAVPA
Trigger: TGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAG...GAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGAGCAGTGGTATCTGTaGTTTCGTCTATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTEQWYL*FRLLSQ
Trigger: CTGTGACAATAGACGAAATCACAGATACCACTGCTC...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCAATGGAGTCCTGGCTTaGATGACATACATGGTGATG +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEINGVLA*MTYMVM
Trigger: CATCACCATGTATGTCATTCAAGCCAGGACTCCATT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTGTTCTCCGTTTCTCTaGGGGGCGGCTGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSCSPFL*GAAGLP
Trigger: GGGGAGCCCAGCCGCCCCTCAGAGAAACGGAGAACA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATGTTCTCCGTTTCTCTaGGGGGCGGCTGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQECSPFL*GAAGLP
Trigger: GGGGAGCCCAGCCGCCCCTCAGAGAAACGGAGAACA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTCCAGGGCCTTCACTTaGTCCCAATTCAGGATAATT +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEISRAFT*SQFRII
Trigger: AATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp TCCAGGCACATAGCAAGATTATATTTCCCTGCTGAGTTGCAGGAACATGTGACCTGGCTCTTTTCCTTCTaGAATGGCAACGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SRHIARLYFPAELQEHVTWLFSF*NGNVQS
Trigger: GCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCA...GGTCACATGTTCCTGCAACTCAGCAGGGAAATATAATCTTGCTATGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACTCAGCTCTCCAGAATaGGGTGGCGGGCCACACAGT +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTLSSPE*GGGPHS
Trigger: ACTGTGTGGCCCGCCACCCCATTCTGGAGAGCTGAG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTGGCTTTCCTTGCTATTaGCTTTCCATCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: PACFSWMFRIIKSPAESPGFPCY*LSISSS
Trigger: CGAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCC...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp AAGGGAGAGAAGGGGTGCACGCTCTCATTCCTGAACACGTATCTAGAGGCATCAGGTGTAAACAGGTTTTaGAGACGCTTTTGGCTTACA +
Preference number: 4 (lower is better)
Translates to: KGEKGCTLSFLNTYLEASGVNRF*RRFWLT
Trigger: TGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACC...TGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp ATTACCCTTGTTGGATCTTTCACTACCAAGTTTCCAGTACTGCTAGCAGTTCCAACCACTGACATTCGCTaGTGTGACTTCGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ITLVGSFTTKFPVLLAVPTTDIR*CDFGES
Trigger: GCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGT...TGGAACTGCTAGCAGTACTGGAAACTTGGTAGTGAAAGATCCAACAAGGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGTGGCTGGTGGTTTGGTaGGTTCTTCTTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QKDFWQRYWLVVWWVLLLWLVVW*VLLLQN
Trigger: ATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCA...CAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCAAAGATACTGGCTGGTaGTTTGGTGGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIKDTGW*FGGFFF
Trigger: GAAGAAGAACCCACCAAACCACCAGCCAGTATCTTT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp TGTCTAGCGAGTGATCATGCGTTACCTGGCACGGTAAAACAATACTCTCTCCAAGGCAAAGATACTGGCTaGTGGTTTGGTGGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLASDHALPGTVKQYSLQGKDTG*WFGGFF
Trigger: GAAGAACCCACCAAACCACCAGCCAGTATCTTTGCC...TTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTTGGCAGAAAGACTTCTaGCAAAGATACTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PACFSWMFRIIKSPAESPWQKDF*QRYWLV
Trigger: CACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCA...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGTCTATTCTTCTCCAGTaGGGAGGCCCAGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWSILLQ*GGPENF
Trigger: GAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGA...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCAAATATCATTTACACTaGGGTTGGGAACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIKYHLH*GWELPG
Trigger: CCCAGGGAGTTCCCAACCCCAGTGTAAATGATATTT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTCCAACTCTTTCAAAGTTACTCTCTCCAACAGTaGCATCCATACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GCFGSSNHQLNPLQLFQSYSLQQ*HPYWKG
Trigger: CCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTA...ACTTTGAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp TCTCCAGGAGAGCTGAGCAGTGGTATCTGTGATTTCGTCTATTGTCACAGCCTCCAGGTGTCCATTAAATaGCCAAGTAAACACGATGTC +
Preference number: 4 (lower is better)
Translates to: SPGELSSGICDFVYCHSLQVSIK*PSKHDV
Trigger: GACATCGTGTTTACTTGGTCATTTAATGGACACCTG...GAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACCACCGTGGTGGGACTaGAAGGGCCTTCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTPPWWD*KGLLLC
Trigger: ACAAAGGAGAAGGCCCTTTCAGTCCCACCACGGTGG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp TCTCCAGGAGAGCTGAGCAGTGGTATCTGTGATTTCGTCTATTGTCACAGCCTCGCTCTTGAAGACACATaGTGTGGAGTTACTCTATGT +
Preference number: 4 (lower is better)
Translates to: SPGELSSGICDFVYCHSLALEDT*CGVTLC
Trigger: ACATAGAGTAACTCCACAGCATGTGTCTTCAAGAGC...GAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTATAAAAATCGGGCCATaGAGTGTGGAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTIKIGP*SVESSA
Trigger: TGCAGATGATTCCACACTGCATGGCCCGATTTTTAT...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAATCTTCTGGCTTTCCTTaGTATTGGCTTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: RLLAKILAGGLVGSSSAESSGFP*YWLSIS
Trigger: GCTGATGGAAAGCCAATAGCAAGGAAAGCCAGAAGA...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCACATATTTCCCAGCATaGTTCAGTTGGATGTTTCGG +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEITYFPA*FSWMFR
Trigger: CCGAAACATCCAACTGAAGCATGCTGGGAAATATGT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCACTTGTTTGGACCATaGAGACATATTTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIHLFGP*RHISQH
Trigger: ATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ATTACCCTTGTTGGATCTTTCACTACCAAGTTTCCAGTACTGCTAGCAGTTCCAACTGTACTGACTGCTTaGCAGCCCACGGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: ITLVGSFTTKFPVLLAVPTVLTA*QPTENG
Trigger: TCCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGT...TGGAACTGCTAGCAGTACTGGAAACTTGGTAGTGAAAGATCCAACAAGGGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCTCAGCTCTCCAGAATaGGGTGGCGGGCCACACAGT +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHLSSPE*GGGPHS
Trigger: ACTGTGTGGCCCGCCACCCCATTCTGGAGAGCTGAG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGGTGTAAACAGGTTTTaGAGACGCTTTTGGCTTACA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIGVNRF*RRFWLT
Trigger: TGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACATGGTGATGGGGCTGTaGTTGTCAGGCCCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHMVMGL*LSGPGL
Trigger: GAGACCCGGGCCTGACAACCACAGCCCCATCACCAT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTCTCTGAGGGGCGGCTaGGCTCCCCAATCCCAATCA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHSLRGG*APQSQS
Trigger: TGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTCTCTGAGGGGCGGCTaGGCTCCCCAATCCCAATCA +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQSLRGG*APQSQS
Trigger: TGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTTTTTATTGGGGTTATTaGTCAACAAGCTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: THHGRCECLPINEFWDCTFYWGY*STSSLQ
Trigger: TTGAAGGGAGCTTGTTGATCAATAACCCCAATAAAA...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGGTTCCTTGCTCAATTTaGATTCTATCCCGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: QKDFWQRYWLVVWWVLLLVPCSI*ILSRVS
Trigger: GCTAACTCGGGATAGAATTCAAATTGAGCAAGGAAC...CAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp ATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTTGGTCGTTCCTTGCTCAATTTaGATTCTATCCCGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: MHVWLFSFCNGNVQSILVVPCSI*ILSRVS
Trigger: GCTAACTCGGGATAGAATTCAAATTGAGCAAGGAAC...GACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR TCA 90 bp ACTCTCTCCAACAGTGACATCCATACTGGAAGGGGGTACCATTACCCTTGTTGGATACATGCCAGCATCTaGGAGGTTCACTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: TLSNSDIHTGRGYHYPCWIHASI*EVHYCY
Trigger: ATAACAATAGTGAACCTCTCAGATGCTGGCATGTAT...CCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGTTCTGGGACTGTACTaGCTGCTTGCCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSVLGLY*LLASPR
Trigger: CCGTGGGCTGGCAAGCAGTCAGTACAGTCCCAGAAC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGTTCTGGGACTGTACTaGCTGCTTGCCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIVLGLY*LLASPR
Trigger: CCGTGGGCTGGCAAGCAGTCAGTACAGTCCCAGAAC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGTTCTGGGACTGTACTaGCTGCTTGCCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETVLGLY*LLASPR
Trigger: CCGTGGGCTGGCAAGCAGTCAGTACAGTCCCAGAAC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCCACCGTGGTGGGACTaGAAGGGCCTTCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHPPWWD*KGLLLC
Trigger: ACAAAGGAGAAGGCCCTTTCAGTCCCACCACGGTGG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCCACCGTGGTGGGACTaGAAGGGCCTTCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQPPWWD*KGLLLC
Trigger: ACAAAGGAGAAGGCCCTTTCAGTCCCACCACGGTGG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCACAAAATGAATGATTaGAGTACCAGCAGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIHKMND*STSSSH
Trigger: ATGGGAACTGCTGGTACTGCAATCATTCATTTTGTG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCTTAGGCCTTCCATTTaGTTTACATTCCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEILRPSI*FTFPKD
Trigger: GTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ACCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTTATAACACTAAGCTCTaGGTTGGAAAAGATAACTCC +
Preference number: 4 (lower is better)
Translates to: THHGRCECLPINEFWDCTYNTKL*VGKDNS
Trigger: GGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATA...AGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGACATATTTCCCAGCATaGTTCAGTTGGATGTTTCGG +
Preference number: 4 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWTYFPA*FSWMFR
Trigger: CCGAAACATCCAACTGAAGCATGCTGGGAAATATGT...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp CAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCACTTGTTTGGACCATaGAGACATATTTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QKDFWQRYWLVVWWVLLLHLFGP*RHISQH
Trigger: ATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTG...CAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp ATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTTGGTCGGCTTTAAGAACCCATaGATGTTTGGCTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: MHVWLFSFCNGNVQSILVGFKNP*MFGSFP
Trigger: AGGAAAAGAGCCAAACATGCATGGGTTCTTAAAGCC...GACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CCA 90 bp CATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTTGGTGGTGTAAACAGGTTTTaGAGACGCTTTTGGCTTACA +
Preference number: 4 (lower is better)
Translates to: HACLALFLLQWQRPEHLGGVNRF*RRFWLT
Trigger: TGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACC...ACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACATGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCTAGCAGTTCCAAAATaGTTAGTGGCTATACAGGTA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEILAVPK*LVAIQV
Trigger: TACCTGTATAGCCACTAACCATTTTGGAACTGCTAG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCATGGTGATGGGGCTGTaGTTGTCAGGCCCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSMVMGL*LSGPGL
Trigger: GAGACCCGGGCCTGACAACCACAGCCCCATCACCAT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAATGGTGATGGGGCTGTaGTTGTCAGGCCCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIMVMGL*LSGPGL
Trigger: GAGACCCGGGCCTGACAACCACAGCCCCATCACCAT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATGGTGATGGGGCTGTaGTTGTCAGGCCCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETMVMGL*LSGPGL
Trigger: GAGACCCGGGCCTGACAACCACAGCCCCATCACCAT...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCTCTGAGGGGCGGCTaGGCTCCCCAATCCCAATCA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSLRGG*APQSQS
Trigger: TGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAGGGAGAGAAGGGGTGCACGCTCTCATTCCTGAACACGTATCTAGAGGCATCAAAACTTCAATATCTGTaGCAGAAAGACTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KGEKGCTLSFLNTYLEASKLQYL*QKDFWQ
Trigger: TTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTT...TGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
3UTR CAA 72 bp TTGCACAAGGTGCCTCTTGGGCAGTACATTGAGCTTTaGAGATTGCAGCCATTCCTGAAACCATCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LHKVPLGQYIEL*RLQPFLKPSQV
Trigger: AACTTGAGATGGTTTCAGGAATGGCTGCAATCTCAAAAGCTCAATGTACTGCCCAAGAGGCACCTTGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAAGTAGCACCATTCCTTaGCCTCGACGGACAGACACA +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTSSTIP*PRRTDT
Trigger: TGTGTCTGTCCGTCGAGGTCAAGGAATGGTGCTACT...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGATAACTCCCAGCGTCTaGTTTAGTAACGTTGATGAT +
Preference number: 4 (lower is better)
Translates to: QKDFWQRYWLVVWWVLLLITPSV*FSNVDD
Trigger: ATCATCAACGTTACTAAATCAGACGCTGGGAGTTAT...CAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAACGATGTCTAGCGAGTaGTCATGCGTTACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTTMSSE*SCVTWH
Trigger: GTGCCAGGTAACGCATGATCACTCGCTAGACATCGT...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCACCGTGGTGGGACTaGAAGGGCCTTCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPPWWD*KGLLLC
Trigger: ACAAAGGAGAAGGCCCTTTCAGTCCCACCACGGTGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGTTCGTGATTTTTGTTaGTGTCTGATTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIVRDFC*CLISNC
Trigger: ACAGTTGGAAATCAGACATCAACAAAAATCACGAAC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGCTAACTCAGTTGAGTaGAAAGAAAATCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIANSVE*KENLPV
Trigger: TACAGGAAGATTTTCTTTTCACTCAACTGAGTTAGC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTAGAGGCTTTAAGAACCCATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAAAGTTGCAGGAACATGTaGCCTGTTTTGGCCAATGAA +
Preference number: 4 (lower is better)
Translates to: VEALRTHACLALFLLQWQSCRNM*PVLANE
Trigger: TTCATTGGCCAAAACAGGTCACATGTTCCTGCAACT...TTGCCATTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTCTTAAAGCCTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR GCA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGCTTAGGCCTTCCATTTaGTTTACATTCCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWLRPSI*FTFPKD
Trigger: GTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAG...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp ATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTTGGTCCTTAGGCCTTCCATTTaGTTTACATTCCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: MHVWLFSFCNGNVQSILVLRPSI*FTFPKD
Trigger: GTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAG...GACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR GCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTATAACACTAAGCTCTaGGTTGGAAAAGATAACTCC +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIYNTKL*VGKDNS
Trigger: GGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTGGGACTGTACTGACTaGTTGCCAGCCCACGGAGAA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHWDCTD*LPAHGE
Trigger: TTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTCCCA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ATTACCCTTGTTGGATCTTTCACTACCAAGTTTCCAGTACTGCTAGCAGTTCCACGTTGGCTGCAACTGTaGGGAATTCATATTCAACCC +
Preference number: 4 (lower is better)
Translates to: ITLVGSFTTKFPVLLAVPRWLQL*GIHIQP
Trigger: GGGTTGAATATGAATTCCGCACAGTTGCAGCCAACG...TGGAACTGCTAGCAGTACTGGAAACTTGGTAGTGAAAGATCCAACAAGGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp ATTACCCTTGTTGGATCTTTCACTACCAAGTTTCCAGTACTGCTAGCAGTTCCACCCAATCACGTTGGCTaGAACTGTGCGGAATTCATA +
Preference number: 4 (lower is better)
Translates to: ITLVGSFTTKFPVLLAVPPNHVG*NCAEFI
Trigger: TATGAATTCCGCACAGTTGCAGCCAACGTGATTGGG...TGGAACTGCTAGCAGTACTGGAAACTTGGTAGTGAAAGATCCAACAAGGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATCGGGCCATGCAGTGTaGAATCATCTGCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTSGHAV*NHLQGT
Trigger: TGTGCCTTGCAGATGATTCCACACTGCATGGCCCGA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CCAGCGTCTGATTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAAATGTTTGTCGCTGTGCACTaGTACGTTCCAGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: PASDLVTLMILRFPSSEMFVAVH*YVPASW
Trigger: CCAAGATGCTGGAACGTACCAGTGCACAGCGACAAA...CATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp TCTCCAGGAGAGCTGAGCAGTGGTATCTGTGATTTCGTCTATTGTCACAGCCTCTACCATTACCCTTGTTaGATCTTTCACTACCAAGTT +
Preference number: 4 (lower is better)
Translates to: SPGELSSGICDFVYCHSLYHYPC*IFHYQV
Trigger: AACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTA...GAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGAGCCTCTGGGGGACCTaGAGGACCTCTTACAATCAG +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQSLWGT*RTSYNQ
Trigger: CTGATTGTAAGAGGTCCTCCAGGTCCCCCAGAGGCT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTATTGTCACAGCCTCTaGGGGACCTGGAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQYCHSL*GTWRTS
Trigger: AGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTATTGTCACAGCCTCTaGGGGACCTGGAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHYCHSL*GTWRTS
Trigger: AGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGACCACTGACATTCGCTaGTGTGACTTCGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQTTDIR*CDFGES
Trigger: GCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCAAACTTCAATATCTGTaGCAGAAAGACTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIKLQYL*QKDFWQ
Trigger: TTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CCAGCATGCTTCAGTTGGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTTCGCCAGATAATAGTTaGTACTGGACATCATTTCTC +
Preference number: 4 (lower is better)
Translates to: PACFSWMFRIIKSPAESPSPDNS*YWTSFL
Trigger: GAGAAATGATGTCCAGTACCAACTATTATCTGGCGA...AGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp TCCAGGCACATAGCAAGATTATATTTCCCTGCTGAGTTGCAGGAACATGTGACCGAACCCATGCATGTTTaGCTCTTTTCCTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SRHIARLYFPAELQEHVTEPMHV*LFSFCN
Trigger: ATTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTC...GGTCACATGTTCCTGCAACTCAGCAGGGAAATATAATCTTGCTATGTGCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR TCA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGCATTTAACTTCCACCTaGTATGAGGTTTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWHLTST*YEVLDF
Trigger: GAAATCCAAAACCTCATATCAGGTGGAAGTTAAATG...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAGTAGCACCATTCCTTaGCCTCGACGGACAGACACA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHSSTIP*PRRTDT
Trigger: TGTGTCTGTCCGTCGAGGTCAAGGAATGGTGCTACT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACATCAAATCACCAGCTaGATCCTGCCCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTHQITS*ILPSNS
Trigger: AGAGTTGGAGGGCAGGATTCAGCTGGTGATTTGATG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ATTACCCTTGTTGGATCTTTCACTACCAAGTTTCCAGTACTGCTAGCAGTTCCAAATGGAGTCCTGGCTTaGATGACATACATGGTGATG +
Preference number: 4 (lower is better)
Translates to: ITLVGSFTTKFPVLLAVPNGVLA*MTYMVM
Trigger: CATCACCATGTATGTCATTCAAGCCAGGACTCCATT...TGGAACTGCTAGCAGTACTGGAAACTTGGTAGTGAAAGATCCAACAAGGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCTAGAGGCATCAGCTaGGGCCAGCACTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSRGIS*GQHCQH
Trigger: ATGCTGACAGTGCTGGCCTCAGCTGATGCCTCTAGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTCTAGAGGCATCAGCTaGGGCCAGCACTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETSRGIS*GQHCQH
Trigger: ATGCTGACAGTGCTGGCCTCAGCTGATGCCTCTAGA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTCTAGAGGCATCAGCTaGGGCCAGCACTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKSRGIS*GQHCQH
Trigger: ATGCTGACAGTGCTGGCCTCAGCTGATGCCTCTAGA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTAGAGGCTTTAAGAACCCATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAAATTATATTTCCCTGCTaGGTTGCAGGAACATGTGAC +
Preference number: 4 (lower is better)
Translates to: VEALRTHACLALFLLQWQIIFPC*VAGTCD
Trigger: GTCACATGTTCCTGCAACTCAGCAGGGAAATATAAT...TTGCCATTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTCTTAAAGCCTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR GCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACACTGTACTGACTGCTTaGCAGCCCACGGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHTVLTA*QPTENG
Trigger: TCCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGACTGTACTGACTGCTTaGCAGCCCACGGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQTVLTA*QPTENG
Trigger: TCCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTGGGACTGTACTGACTaGTTGCCAGCCCACGGAGAA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSWDCTD*LPAHGE
Trigger: TTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTCCCA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAGGTGGGTTCTTCTTCTaGAGAATACACCACCGTGGT +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTGGFFF*RIHHRG
Trigger: ACCACGGTGGTGTATTCTGCAGAAGAAGAACCCACC...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTGTCACATTGACTGTTaGACTAGAGGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQCHIDC*TRGACP
Trigger: GGGACAGGCCCCTCTAGTGCAACAGTCAATGTGACA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCAGGGATGGGAATATTaGACAAGGTGCCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQQGWEY*TRCLLG
Trigger: GCCCAAGAGGCACCTTGTGCAATATTCCCATCCCTG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGGCCCCAGGACCTTGTaGTTTGTCACGGTATTGGTA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHGPRTL*FVTVLV
Trigger: TACCAATACCGTGACAAACCACAAGGTCCTGGGGCC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCAGACATTTTCTTCCATaGCCACGTGAATATCATTTA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIRHFLP*PREYHL
Trigger: TAAATGATATTCACGTGGCCATGGAAGAAAATGTCT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp TTCATATTCAACCCAAGGGTTCAAACCCACCACGGTCGCTGTGAATGTCTTCCCAGACATTTTCTTCCATaGCCACGTGAATATCATTTA +
Preference number: 4 (lower is better)
Translates to: FIFNPRVQTHHGRCECLPRHFLP*PREYHL
Trigger: TAAATGATATTCACGTGGCCATGGAAGAAAATGTCT...GGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTGGGTTGAATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAGCCTCTGGGGGACCTaGAGGACCTCTTACAATCAG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSLWGT*RTSYNQ
Trigger: CTGATTGTAAGAGGTCCTCCAGGTCCCCCAGAGGCT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAAGCCTCTGGGGGACCTaGAGGACCTCTTACAATCAG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETISLWGT*RTSYNQ
Trigger: CTGATTGTAAGAGGTCCTCCAGGTCCCCCAGAGGCT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTATTGTCACAGCCTCTaGGGGACCTGGAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSYCHSL*GTWRTS
Trigger: AGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCAGCCCACGGAGAATaGAGTCCTGGCTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPAHGE*SPGLND
Trigger: GTCATTCAAGCCAGGACTCCATTCTCCGTGGGCTGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCCAGCCCACGGAGAATaGAGTCCTGGCTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETPAHGE*SPGLND
Trigger: GTCATTCAAGCCAGGACTCCATTCTCCGTGGGCTGG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCACCACTGACATTCGCTaGTGTGACTTCGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSTTDIR*CDFGES
Trigger: GCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCACTGACATTCGCTaGTGTGACTTCGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQETTDIR*CDFGES
Trigger: GCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTCCTCCGTCGCTGAATaGCTTAATTTCTATTATATA +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEISSVAE*LNFYYI
Trigger: TATATAATAGAAATTAAGCCATTCAGCGACGGAGGA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATACATGCATTCGAAGTaGAAGCCCCAGATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTYMHSK*KPQILS
Trigger: CGAGAGGATCTGGGGCTTCCACTTCGAATGCATGTA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGAATATTTCTCCTTGTaGTCTCTGCAAGTTTATCTT +
Preference number: 4 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIEYFSL*SLQVYL
Trigger: AAGATAAACTTGCAGAGACCACAAGGAGAAATATTC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGAGTAGCACCATTCCTTaGCCTCGACGGACAGACACA +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKSSTIP*PRRTDT
Trigger: TGTGTCTGTCCGTCGAGGTCAAGGAATGGTGCTACT...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CCAGCGTCTGATTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAAATGAGATTCCCAGTCTCTTaGGAAACAAAGCGGCGATTA +
Preference number: 4 (lower is better)
Translates to: PASDLVTLMILRFPSSEMRFPVS*ETKRRL
Trigger: TAATCGCCGCTTTGTTTCTCAAGAGACTGGGAATCT...CATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACCAGCATCCTCCTGCTaGAAATTAGGGATCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTPASSC*KLGISR
Trigger: TCTTGAGATCCCTAATTTTCAGCAGGAGGATGCTGG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTACTCTCTCCAACAGTaGCATCCATACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQYSLQQ*HPYWKG
Trigger: CCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCACGATGTCTAGCGAGTaGTCATGCGTTACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSTMSSE*SCVTWH
Trigger: GTGCCAGGTAACGCATGATCACTCGCTAGACATCGT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACGATGTCTAGCGAGTaGTCATGCGTTACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQETMSSE*SCVTWH
Trigger: GTGCCAGGTAACGCATGATCACTCGCTAGACATCGT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAGATTGCAGCCATTCCTaGAACCATCTCAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTDCSHS*NHLKLG
Trigger: ACCCAACTTGAGATGGTTTCAGGAATGGCTGCAATC...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCACCGTTGCTCCTTTTaGAGTCGGAACTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQHRCSF*SRNCFW
Trigger: CCAGAAACAGTTCCGACTGCAAAAGGAGCAACGGTG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTTCCAGCTTCACCGTTaGTCCTTTTGCAGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQFQLHR*SFCSRN
Trigger: GTTCCGACTGCAAAAGGAGCAACGGTGAAGCTGGAA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCACTGTACTGACTGCTTaGCAGCCCACGGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSTVLTA*QPTENG
Trigger: TCCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAACTGTACTGACTGCTTaGCAGCCCACGGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETITVLTA*QPTENG
Trigger: TCCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACGTTGGCTGCAACTGTaGGGAATTCATATTCAACCC +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTRWLQL*GIHIQP
Trigger: GGGTTGAATATGAATTCCGCACAGTTGCAGCCAACG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAAGGGAGAGAAGGGGTaGACGCTCTCATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSKGEKG*TLSFLN
Trigger: GTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAAAGGGAGAGAAGGGGTaGACGCTCTCATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIKGEKG*TLSFLN
Trigger: GTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCAAGGGAGAGAAGGGGTaGACGCTCTCATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETKGEKG*TLSFLN
Trigger: GTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGAAGGGAGAGAAGGGGTaGACGCTCTCATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKKGEKG*TLSFLN
Trigger: GTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp TGCTTTACATTCCCAAAAGACATTTTCTTCCATGGCCACGTGAATATCATTTATAAGGGAGAGAAGGGGTaGACGCTCTCATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: CFTFPKDIFFHGHVNIIYKGEKG*TLSFLN
Trigger: GTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT...ATAAATGATATTCACGTGGCCATGGAAGAAAATGTCTTTTGGGAATGTAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTGTCACATTGACTGTTaGACTAGAGGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSCHIDC*TRGACP
Trigger: GGGACAGGCCCCTCTAGTGCAACAGTCAATGTGACA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATGTCACATTGACTGTTaGACTAGAGGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETICHIDC*TRGACP
Trigger: GGGACAGGCCCCTCTAGTGCAACAGTCAATGTGACA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGAATTTGTTCACTGCTaGTGCCATCTCCTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSEFVHC*CHLLRR
Trigger: GCGACGGAGGAGATGGCAGCAGCAGTGAACAAATTC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGAATTTGTTCACTGCTaGTGCCATCTCCTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETEFVHC*CHLLRR
Trigger: GCGACGGAGGAGATGGCAGCAGCAGTGAACAAATTC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGAATTTGTTCACTGCTaGTGCCATCTCCTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEEFVHC*CHLLRR
Trigger: GCGACGGAGGAGATGGCAGCAGCAGTGAACAAATTC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGAATTTGTTCACTGCTaGTGCCATCTCCTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIEFVHC*CHLLRR
Trigger: GCGACGGAGGAGATGGCAGCAGCAGTGAACAAATTC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCAGGGATGGGAATATTaGACAAGGTGCCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSQGWEY*TRCLLG
Trigger: GCCCAAGAGGCACCTTGTGCAATATTCCCATCCCTG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATACAGGGATGGGAATATTaGACAAGGTGCCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIQGWEY*TRCLLG
Trigger: GCCCAAGAGGCACCTTGTGCAATATTCCCATCCCTG...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATCGGGCCATGCAGTGTaGAATCATCTGCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQESGHAV*NHLQGT
Trigger: TGTGCCTTGCAGATGATTCCACACTGCATGGCCCGA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGGCCCCAGGACCTTGTaGTTTGTCACGGTATTGGTA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSGPRTL*FVTVLV
Trigger: TACCAATACCGTGACAAACCACAAGGTCCTGGGGCC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAGGCTTTCCTTGCTATTaGCTTTCCATCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTGFPCY*LSISSS
Trigger: CGAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCC...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTAGAGGCTTTAAGAACCCATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAATTTTGGAGACGCTTTTaGCTTACACTCAATGACAAC +
Preference number: 4 (lower is better)
Translates to: VEALRTHACLALFLLQWQFWRRF*LTLNDN
Trigger: GTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAA...TTGCCATTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTCTTAAAGCCTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CCA 90 bp GGATGTTTCGGATCATCAAATCACCAGCTGAATCCCCTCCAACTCTTTCAAAGTCTAGCAGTTCCAAAATaGTTAGTGGCTATACAGGTA +
Preference number: 4 (lower is better)
Translates to: GCFGSSNHQLNPLQLFQSLAVPK*LVAIQV
Trigger: TACCTGTATAGCCACTAACCATTTTGGAACTGCTAG...ACTTTGAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACCCATCAATGAGTTCTaGGACTGTACTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTPINEF*DCTDCL
Trigger: CAAGCAGTCAGTACAGTCCCAGAACTCATTGATGGG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGGGTTGACTTGGTGGTaGCTTTCGGGTTGTCACATT +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQGLTWW*LSGCHI
Trigger: AATGTGACAACCCGAAAGCCACCACCAAGTCAACCC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTACTCTCTCCAACAGTaGCATCCATACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSYSLQQ*HPYWKG
Trigger: CCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTACTCTCTCCAACAGTaGCATCCATACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETYSLQQ*HPYWKG
Trigger: CCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATACTCTCTCCAACAGTaGCATCCATACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIYSLQQ*HPYWKG
Trigger: CCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCATCAAATCACCAGCTaGATCCTGCCCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSHQITS*ILPSNS
Trigger: AGAGTTGGAGGGCAGGATTCAGCTGGTGATTTGATG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCATCAAATCACCAGCTaGATCCTGCCCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKHQITS*ILPSNS
Trigger: AGAGTTGGAGGGCAGGATTCAGCTGGTGATTTGATG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCATCAAATCACCAGCTaGATCCTGCCCTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETHQITS*ILPSNS
Trigger: AGAGTTGGAGGGCAGGATTCAGCTGGTGATTTGATG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAGAGCAGTGGTATCTGTaGTTTCGTCTATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTEQWYL*FRLLSQ
Trigger: CTGTGACAATAGACGAAATCACAGATACCACTGCTC...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAAATGGAGTCCTGGCTTaGATGACATACATGGTGATG +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTNGVLA*MTYMVM
Trigger: CATCACCATGTATGTCATTCAAGCCAGGACTCCATT...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGCCTTGACAGCTAAGTaGTACAGCACACTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQALTAK*YSTLPF
Trigger: AAAAGGCAGTGTGCTGTATCACTTAGCTGTCAAGGC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGATTGCAGCCATTCCTaGAACCATCTCAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHDCSHS*NHLKLG
Trigger: ACCCAACTTGAGATGGTTTCAGGAATGGCTGCAATC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACGAGTTTGTCGCTGTaGACTGGTACGTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQETSLSL*TGTFQH
Trigger: ATGCTGGAACGTACCAGTGCACAGCGACAAACTCGT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAACGAGTTTGTCGCTGTaGACTGGTACGTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETITSLSL*TGTFQH
Trigger: ATGCTGGAACGTACCAGTGCACAGCGACAAACTCGT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACACCGTTGCTCCTTTTaGAGTCGGAACTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEHRCSF*SRNCFW
Trigger: CCAGAAACAGTTCCGACTGCAAAAGGAGCAACGGTG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GTAGAGGCTTTAAGAACCCATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAATATAACACTAAGCTCTaGGTTGGAAAAGATAACTCC +
Preference number: 4 (lower is better)
Translates to: VEALRTHACLALFLLQWQYNTKL*VGKDNS
Trigger: GGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATA...TTGCCATTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTCTTAAAGCCTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR GCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCGTTGGCTGCAACTGTaGGGAATTCATATTCAACCC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHRWLQL*GIHIQP
Trigger: GGGTTGAATATGAATTCCGCACAGTTGCAGCCAACG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGGTGGGTTCTTCTTCTaGAGAATACACCACCGTGGT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSGGFFF*RIHHRG
Trigger: ACCACGGTGGTGTATTCTGCAGAAGAAGAACCCACC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATTTGTCGCTGTGCACTaGTACGTTCCAGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIFVAVH*YVPASW
Trigger: CCAAGATGCTGGAACGTACCAGTGCACAGCGACAAA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATTTGTCGCTGTGCACTaGTACGTTCCAGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEFVAVH*YVPASW
Trigger: CCAAGATGCTGGAACGTACCAGTGCACAGCGACAAA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCCCATCAATGAGTTCTaGGACTGTACTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQPINEF*DCTDCL
Trigger: CAAGCAGTCAGTACAGTCCCAGAACTCATTGATGGG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCAATCCCAATCACGTTaGCTGCAACTGTGCGGAATT +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHQSQSR*LQLCGI
Trigger: AATTCCGCACAGTTGCAGCCAACGTGATTGGGATTG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTACTGGCTGGTGGTTTaGTGGGTTCTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSYWLVV*WVLLLQ
Trigger: CTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATACTGGCTGGTGGTTTaGTGGGTTCTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIYWLVV*WVLLLQ
Trigger: CTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTACTGGCTGGTGGTTTaGTGGGTTCTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETYWLVV*WVLLLQ
Trigger: CTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGGCAAAGATACTGGCTaGTGGTTTGGTGGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSGKDTG*WFGGFF
Trigger: GAAGAACCCACCAAACCACCAGCCAGTATCTTTGCC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGGCAAAGATACTGGCTaGTGGTTTGGTGGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEGKDTG*WFGGFF
Trigger: GAAGAACCCACCAAACCACCAGCCAGTATCTTTGCC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGGGCAAAGATACTGGCTaGTGGTTTGGTGGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKGKDTG*WFGGFF
Trigger: GAAGAACCCACCAAACCACCAGCCAGTATCTTTGCC...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGGCAAAGATACTGGCTaGTGGTTTGGTGGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIGKDTG*WFGGFF
Trigger: GAAGAACCCACCAAACCACCAGCCAGTATCTTTGCC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTCTATTCTTCTCCAGTaGGGAGGCCCAGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQSILLQ*GGPENF
Trigger: GAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGGGTTGACTTGGTGGTaGCTTTCGGGTTGTCACATT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSGLTWW*LSGCHI
Trigger: AATGTGACAACCCGAAAGCCACCACCAAGTCAACCC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGGGTTGACTTGGTGGTaGCTTTCGGGTTGTCACATT +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEGLTWW*LSGCHI
Trigger: AATGTGACAACCCGAAAGCCACCACCAAGTCAACCC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTACATGCATTCGAAGTaGAAGCCCCAGATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSYMHSK*KPQILS
Trigger: CGAGAGGATCTGGGGCTTCCACTTCGAATGCATGTA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATACATGCATTCGAAGTaGAAGCCCCAGATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEYMHSK*KPQILS
Trigger: CGAGAGGATCTGGGGCTTCCACTTCGAATGCATGTA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTACATGCATTCGAAGTaGAAGCCCCAGATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKYMHSK*KPQILS
Trigger: CGAGAGGATCTGGGGCTTCCACTTCGAATGCATGTA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAATGGAGTCCTGGCTTaGATGACATACATGGTGATG +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHNGVLA*MTYMVM
Trigger: CATCACCATGTATGTCATTCAAGCCAGGACTCCATT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGCCTTGACAGCTAAGTaGTACAGCACACTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSALTAK*YSTLPF
Trigger: AAAAGGCAGTGTGCTGTATCACTTAGCTGTCAAGGC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGCCTTGACAGCTAAGTaGTACAGCACACTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEALTAK*YSTLPF
Trigger: AAAAGGCAGTGTGCTGTATCACTTAGCTGTCAAGGC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTATTGTACTGATGGCTaGCAGCGTACATGCATTCGA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHYCTDG*QRTCIR
Trigger: TCGAATGCATGTACGCTGTCAGCCATCAGTACAATA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATGCATACAACAGCCTTaGGTTACGGACCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQECIQQP*VTDQVF
Trigger: GAAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGGATTGCAGCCATTCCTaGAACCATCTCAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKDCSHS*NHLKLG
Trigger: ACCCAACTTGAGATGGTTTCAGGAATGGCTGCAATC...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCTTGGGCAGTACATTaGGCTTTTGAGATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSWAVH*AFEIAA
Trigger: GGCTGCAATCTCAAAAGCTCAATGTACTGCCCAAGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTCTTCTGGCTTTCCTTaGTATTGGCTTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHSSGFP*YWLSIS
Trigger: GCTGATGGAAAGCCAATAGCAAGGAAAGCCAGAAGA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCACCAGCTGAATCCTaGCCTCCAACTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSPAES*PPTLSK
Trigger: CTTTGAAAGAGTTGGAGGGCAGGATTCAGCTGGTGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTCACCAGCTGAATCCTaGCCTCCAACTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETSPAES*PPTLSK
Trigger: CTTTGAAAGAGTTGGAGGGCAGGATTCAGCTGGTGA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACACTTGTTTGGACCATaGAGACATATTTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTHLFGP*RHISQH
Trigger: ATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCGTTGGCTGCAACTGTaGGGAATTCATATTCAACCC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSRWLQL*GIHIQP
Trigger: GGGTTGAATATGAATTCCGCACAGTTGCAGCCAACG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACGTTGGCTGCAACTGTaGGGAATTCATATTCAACCC +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQERWLQL*GIHIQP
Trigger: GGGTTGAATATGAATTCCGCACAGTTGCAGCCAACG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCCAATCACGTTGGCTaGAACTGTGCGGAATTCATA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPNHVG*NCAEFI
Trigger: TATGAATTCCGCACAGTTGCAGCCAACGTGATTGGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATACCCAATCACGTTGGCTaGAACTGTGCGGAATTCATA +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIPNHVG*NCAEFI
Trigger: TATGAATTCCGCACAGTTGCAGCCAACGTGATTGGG...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCCCAATCACGTTGGCTaGAACTGTGCGGAATTCATA +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKPNHVG*NCAEFI
Trigger: TATGAATTCCGCACAGTTGCAGCCAACGTGATTGGG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTTCGAATTTGTTCACTaGTGCTGCCATCTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSFEFVH*CCHLLR
Trigger: ACGGAGGAGATGGCAGCAGCAGTGAACAAATTCGAA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTTCGAATTTGTTCACTaGTGCTGCCATCTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETFEFVH*CCHLLR
Trigger: ACGGAGGAGATGGCAGCAGCAGTGAACAAATTCGAA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGGCTTTCCTTGCTATTaGCTTTCCATCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEGFPCY*LSISSS
Trigger: CGAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGGCTTTCCTTGCTATTaGCTTTCCATCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSGFPCY*LSISSS
Trigger: CGAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATTGACTTGTGTCTTCTaGCTTTCCTTGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTLTCVF*LSLLLA
Trigger: AGCCAATAGCAAGGAAAGCCAGAAGACACAAGTCAA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CCAGCGTCTGATTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAAATGTTTTGGAGACGCTTTTaGCTTACACTCAATGACAAC +
Preference number: 4 (lower is better)
Translates to: PASDLVTLMILRFPSSEMFWRRF*LTLNDN
Trigger: GTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAA...CATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCCATCAATGAGTTCTaGGACTGTACTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPINEF*DCTDCL
Trigger: CAAGCAGTCAGTACAGTCCCAGAACTCATTGATGGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCAATCCCAATCACGTTaGCTGCAACTGTGCGGAATT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSQSQSR*LQLCGI
Trigger: AATTCCGCACAGTTGCAGCCAACGTGATTGGGATTG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCAATCCCAATCACGTTaGCTGCAACTGTGCGGAATT +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKQSQSR*LQLCGI
Trigger: AATTCCGCACAGTTGCAGCCAACGTGATTGGGATTG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTGGCTGGTGGTTTGGTaGGTTCTTCTTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSWLVVW*VLLLQN
Trigger: ATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTGGCTGGTGGTTTGGTaGGTTCTTCTTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKWLVVW*VLLLQN
Trigger: ATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTGGCTGGTGGTTTGGTaGGTTCTTCTTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETWLVVW*VLLLQN
Trigger: ATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAAGATACTGGCTGGTaGTTTGGTGGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHKDTGW*FGGFFF
Trigger: GAAGAAGAACCCACCAAACCACCAGCCAGTATCTTT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTGGCAGAAAGACTTCTaGCAAAGATACTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSWQKDF*QRYWLV
Trigger: CACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATGGCAGAAAGACTTCTaGCAAAGATACTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEWQKDF*QRYWLV
Trigger: CACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCTATTCTTCTCCAGTaGGGAGGCCCAGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSILLQ*GGPENF
Trigger: GAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCATCAAAGCCTCCATCTaGTATGTTCCCACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSIKASI*YVPTGN
Trigger: GTTCCCAGTGGGAACATACCAGATGGAGGCTTTGAT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397459.6
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACTGCAAGGCACAAAATaGATGATTGCAGTACCAGCA +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQELQGTK*MIAVPA
Trigger: TGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAAGATTCCCAGTCTCTTaGGAAACAAAGCGGCGATTA +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQERFPVS*ETKRRL
Trigger: TAATCGCCGCTTTGTTTCTCAAGAGACTGGGAATCT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAGATTCCCAGTCTCTTaGGAAACAAAGCGGCGATTA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSRFPVS*ETKRRL
Trigger: TAATCGCCGCTTTGTTTCTCAAGAGACTGGGAATCT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGTTCCTTGCTCAATTTaGATTCTATCCCGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQVPCSI*ILSRVS
Trigger: GCTAACTCGGGATAGAATTCAAATTGAGCAAGGAAC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGAGCAGTGGTATCTGTaGTTTCGTCTATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSEQWYL*FRLLSQ
Trigger: CTGTGACAATAGACGAAATCACAGATACCACTGCTC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGAGCAGTGGTATCTGTaGTTTCGTCTATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIEQWYL*FRLLSQ
Trigger: CTGTGACAATAGACGAAATCACAGATACCACTGCTC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAATGGAGTCCTGGCTTaGATGACATACATGGTGATG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSNGVLA*MTYMVM
Trigger: CATCACCATGTATGTCATTCAAGCCAGGACTCCATT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCCAGGGCCTTCACTTaGTCCCAATTCAGGATAATT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSRAFT*SQFRII
Trigger: AATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTATTGTACTGATGGCTaGCAGCGTACATGCATTCGA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSYCTDG*QRTCIR
Trigger: TCGAATGCATGTACGCTGTCAGCCATCAGTACAATA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTATTGTACTGATGGCTaGCAGCGTACATGCATTCGA +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETYCTDG*QRTCIR
Trigger: TCGAATGCATGTACGCTGTCAGCCATCAGTACAATA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATATTGTACTGATGGCTaGCAGCGTACATGCATTCGA +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIYCTDG*QRTCIR
Trigger: TCGAATGCATGTACGCTGTCAGCCATCAGTACAATA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTCCGCTGTTCTGCCATaGGATCCTTGTAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKSAVLP*DPCKTV
Trigger: TACAGTTTTACAAGGATCTCATGGCAGAACAGCGGA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATCCGCTGTTCTGCCATaGGATCCTTGTAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETISAVLP*DPCKTV
Trigger: TACAGTTTTACAAGGATCTCATGGCAGAACAGCGGA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACATCTCAAGTTGGGTTaGACAACAAAATTCACAACG +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTHLKLG*TTKFTT
Trigger: CGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAGGTGCCTGTCTTCATaGCACACTGTTCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSRCLSS*HTVLFH
Trigger: GTGAAAAAGAACAGTGTGTCATGAAGACAGGCACCT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418658.6
CDS-3UTR TCA 90 bp ATATTAGGTTGTCTCTTTTCTTCCAGGCACATAGCAAGATTATATTTCCCTGCTTTGGCCAATGAAATGTaGGTGAAAGTGCAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: ILGCLFSSRHIARLYFPALANEM*VKVQVL
Trigger: CAACACTTGCACTTTCACTCACATTTCATTGGCCAA...AGCAGGGAAATATAATCTTGCTATGTGCCTGGAAGAAAAGAGACAACCTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR GCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGCTCTTGAAGACACATaGTGTGGAGTTACTCTATGT +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQALEDT*CGVTLC
Trigger: ACATAGAGTAACTCCACAGCATGTGTCTTCAAGAGC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397461.5
ENST00000418658.6
CDS-3UTR GCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGATAAAAATCGGGCCATaGAGTGTGGAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQIKIGP*SVESSA
Trigger: TGCAGATGATTCCACACTGCATGGCCCGATTTTTAT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCTTCTGGCTTTCCTTaGTATTGGCTTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSSGFP*YWLSIS
Trigger: GCTGATGGAAAGCCAATAGCAAGGAAAGCCAGAAGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATCTTCTGGCTTTCCTTaGTATTGGCTTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETISSGFP*YWLSIS
Trigger: GCTGATGGAAAGCCAATAGCAAGGAAAGCCAGAAGA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGAATATTGCACAAGGTaGCTCTTGGGCAGTACATTG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIEYCTR*LLGSTL
Trigger: CAATGTACTGCCCAAGAGGCACCTTGTGCAATATTC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGAATATTGCACAAGGTaGCTCTTGGGCAGTACATTG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSEYCTR*LLGSTL
Trigger: CAATGTACTGCCCAAGAGGCACCTTGTGCAATATTC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGGAATATTGCACAAGGTaGCTCTTGGGCAGTACATTG +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKEYCTR*LLGSTL
Trigger: CAATGTACTGCCCAAGAGGCACCTTGTGCAATATTC...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATACGTTCCAGCATCTTaGGTTTTATTGGGGTTATTG +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTYVPAS*VLLGLL
Trigger: CAATAACCCCAATAAAACCCAAGATGCTGGAACGTA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTTGACTTGTGTCTTCTaGCTTTCCTTGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQLTCVF*LSLLLA
Trigger: AGCCAATAGCAAGGAAAGCCAGAAGACACAAGTCAA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATTTTGGAGACGCTTTTaGCTTACACTCAATGACAAC +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTFWRRF*LTLNDN
Trigger: GTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGGTGTAAACAGGTTTTaGAGACGCTTTTGGCTTACA +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQGVNRF*RRFWLT
Trigger: TGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCCAGCATGCTTCAGTTaGATGTTTCGGATCATCAAA +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQPACFS*MFRIIK
Trigger: TTTGATGATCCGAAACATCCAACTGAAGCATGCTGG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCTGTCCACACTTGTTTaGACCATGCAGACATATTTC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHLSTLV*TMQTYF
Trigger: GAAATATGTCTGCATGGTCCAAACAAGTGTGGACAG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAAAGATACTGGCTGGTaGTTTGGTGGGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSKDTGW*FGGFFF
Trigger: GAAGAAGAACCCACCAAACCACCAGCCAGTATCTTT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAAAATATCATTTACACTaGGGTTGGGAACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIKYHLH*GWELPG
Trigger: CCCAGGGAGTTCCCAACCCCAGTGTAAATGATATTT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAAAATATCATTTACACTaGGGTTGGGAACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEKYHLH*GWELPG
Trigger: CCCAGGGAGTTCCCAACCCCAGTGTAAATGATATTT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACACATTTAACTTCCACCTaGTATGAGGTTTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTHLTST*YEVLDF
Trigger: GAAATCCAAAACCTCATATCAGGTGGAAGTTAAATG...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATTTTATTGGGGTTATTaGTCAACAAGCTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTFYWGY*STSSLQ
Trigger: TTGAAGGGAGCTTGTTGATCAATAACCCCAATAAAA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGTTCCTTGCTCAATTTaGATTCTATCCCGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSVPCSI*ILSRVS
Trigger: GCTAACTCGGGATAGAATTCAAATTGAGCAAGGAAC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGTTCCTTGCTCAATTTaGATTCTATCCCGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETVPCSI*ILSRVS
Trigger: GCTAACTCGGGATAGAATTCAAATTGAGCAAGGAAC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ATATTAGGTTGTCTCTTTTCTTCCAGGCACATAGCAAGATTATATTTCCCTGCTATACATGCCAGCATCTaGGAGGTTCACTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: ILGCLFSSRHIARLYFPAIHASI*EVHYCY
Trigger: ATAACAATAGTGAACCTCTCAGATGCTGGCATGTAT...AGCAGGGAAATATAATCTTGCTATGTGCCTGGAAGAAAAGAGACAACCTAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACATAACTCCCAGCGTCTaGTTTAGTAACGTTGATGAT +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHITPSV*FSNVDD
Trigger: ATCATCAACGTTACTAAATCAGACGCTGGGAGTTAT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCAGGTGTCCATTAAATaGCCAAGTAAACACGATGTC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSQVSIK*PSKHDV
Trigger: GACATCGTGTTTACTTGGTCATTTAATGGACACCTG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCAGGTGTCCATTAAATaGCCAAGTAAACACGATGTC +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETQVSIK*PSKHDV
Trigger: GACATCGTGTTTACTTGGTCATTTAATGGACACCTG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCAGAATTATATGCCTTaGCAGCTAAGTGATACAGCA +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQQNYMP*QLSDTA
Trigger: TGCTGTATCACTTAGCTGTCAAGGCATATAATTCTG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCAGAATTATATGCCTTaGCAGCTAAGTGATACAGCA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHQNYMP*QLSDTA
Trigger: TGCTGTATCACTTAGCTGTCAAGGCATATAATTCTG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTCTCGCGTAGGCATTTaGTATCTTTGGAATTCGAAT +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHSRVGI*YLWNSN
Trigger: ATTCGAATTCCAAAGATATCAAATGCCTACGCGAGA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGAAATCATTATTGTACTaGTGGCTGACAGCGTACATG +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQKSLLY*WLTAYM
Trigger: CATGTACGCTGTCAGCCATCAGTACAATAATGATTT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAATCATTATTGTACTaGTGGCTGACAGCGTACATG +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHKSLLY*WLTAYM
Trigger: CATGTACGCTGTCAGCCATCAGTACAATAATGATTT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGCAGCAACTATTTGTTaGAATAGGAGCAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHAATIC*NRSNLP
Trigger: TGGAAGATTGCTCCTATTTCAACAAATAGTTGCTGC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGGCTCTTGAAGACACATaGTGTGGAGTTACTCTATGT +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKALEDT*CGVTLC
Trigger: ACATAGAGTAACTCCACAGCATGTGTCTTCAAGAGC...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397461.5
ENST00000418658.6
CDS-3UTR GCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAATAAAAATCGGGCCATaGAGTGTGGAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEIKIGP*SVESSA
Trigger: TGCAGATGATTCCACACTGCATGGCCCGATTTTTAT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAAAAATCGGGCCATaGAGTGTGGAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETIKIGP*SVESSA
Trigger: TGCAGATGATTCCACACTGCATGGCCCGATTTTTAT...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCTTAGGCCTTCCATTTaGTTTACATTCCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHLRPSI*FTFPKD
Trigger: GTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCACATATTTCCCAGCATaGTTCAGTTGGATGTTTCGG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSTYFPA*FSWMFR
Trigger: CCGAAACATCCAACTGAAGCATGCTGGGAAATATGT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAACATATTTCCCAGCATaGTTCAGTTGGATGTTTCGG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETITYFPA*FSWMFR
Trigger: CCGAAACATCCAACTGAAGCATGCTGGGAAATATGT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCACTTGTTTGGACCATaGAGACATATTTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSHLFGP*RHISQH
Trigger: ATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCACTTGTTTGGACCATaGAGACATATTTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETHLFGP*RHISQH
Trigger: ATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTACAGATGTCTTCAGTaGATTGCAGAGTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQYRCLQ*IAEFPK
Trigger: CTTTGGAAACTCTGCAATGCACTGAAGACATCTGTA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAGTCTTCCGCTGTTCTaGCATGAGATCCTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSLPLF*HEILVK
Trigger: TTTTACAAGGATCTCATGGCAGAACAGCGGAAGACT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGAATTTTCTCATGAATaGCACCCAAATCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETEFSHE*HPNHLQ
Trigger: CTGGAGGTGATTTGGGTGGCATTCATGAGAAAATTC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418658.6
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATTGACTTGTGTCTTCTaGCTTTCCTTGCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETILTCVF*LSLLLA
Trigger: AGCCAATAGCAAGGAAAGCCAGAAGACACAAGTCAA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGGTGTAAACAGGTTTTaGAGACGCTTTTGGCTTACA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSGVNRF*RRFWLT
Trigger: TGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCAGCATGCTTCAGTTaGATGTTTCGGATCATCAAA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPACFS*MFRIIK
Trigger: TTTGATGATCCGAAACATCCAACTGAAGCATGCTGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCCAGCATGCTTCAGTTaGATGTTTCGGATCATCAAA +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKPACFS*MFRIIK
Trigger: TTTGATGATCCGAAACATCCAACTGAAGCATGCTGG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp TGCTTTACATTCCCAAAAGACATTTTCTTCCATGGCCACGTGAATATCATTTATCCAGCATGCTTCAGTTaGATGTTTCGGATCATCAAA +
Preference number: 4 (lower is better)
Translates to: CFTFPKDIFFHGHVNIIYPACFS*MFRIIK
Trigger: TTTGATGATCCGAAACATCCAACTGAAGCATGCTGG...ATAAATGATATTCACGTGGCCATGGAAGAAAATGTCTTTTGGGAATGTAAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCTGTCCACACTTGTTTaGACCATGCAGACATATTTC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSLSTLV*TMQTYF
Trigger: GAAATATGTCTGCATGGTCCAAACAAGTGTGGACAG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATACTGTCCACACTTGTTTaGACCATGCAGACATATTTC +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETILSTLV*TMQTYF
Trigger: GAAATATGTCTGCATGGTCCAAACAAGTGTGGACAG...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCTGTCCACACTTGTTTaGACCATGCAGACATATTTC +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKLSTLV*TMQTYF
Trigger: GAAATATGTCTGCATGGTCCAAACAAGTGTGGACAG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAAAACTTCAATATCTGTaGCAGAAAGACTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTKLQYL*QKDFWQ
Trigger: TTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTT...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCATTTAACTTCCACCTaGTATGAGGTTTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHHLTST*YEVLDF
Trigger: GAAATCCAAAACCTCATATCAGGTGGAAGTTAAATG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCATACATGCCAGCATCTaGGAGGTTCACTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSIHASI*EVHYCY
Trigger: ATAACAATAGTGAACCTCTCAGATGCTGGCATGTAT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAATACATGCCAGCATCTaGGAGGTTCACTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIIHASI*EVHYCY
Trigger: ATAACAATAGTGAACCTCTCAGATGCTGGCATGTAT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATACATGCCAGCATCTaGGAGGTTCACTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETIHASI*EVHYCY
Trigger: ATAACAATAGTGAACCTCTCAGATGCTGGCATGTAT...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCATAACTCCCAGCGTCTaGTTTAGTAACGTTGATGAT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSITPSV*FSNVDD
Trigger: ATCATCAACGTTACTAAATCAGACGCTGGGAGTTAT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAATAACTCCCAGCGTCTaGTTTAGTAACGTTGATGAT +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEITPSV*FSNVDD
Trigger: ATCATCAACGTTACTAAATCAGACGCTGGGAGTTAT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGATAACTCCCAGCGTCTaGTTTAGTAACGTTGATGAT +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKITPSV*FSNVDD
Trigger: ATCATCAACGTTACTAAATCAGACGCTGGGAGTTAT...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCAGAATTATATGCCTTaGCAGCTAAGTGATACAGCA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSQNYMP*QLSDTA
Trigger: TGCTGTATCACTTAGCTGTCAAGGCATATAATTCTG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCAGAATTATATGCCTTaGCAGCTAAGTGATACAGCA +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETQNYMP*QLSDTA
Trigger: TGCTGTATCACTTAGCTGTCAAGGCATATAATTCTG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCTCGCGTAGGCATTTaGTATCTTTGGAATTCGAAT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSRVGI*YLWNSN
Trigger: ATTCGAATTCCAAAGATATCAAATGCCTACGCGAGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTCTCGCGTAGGCATTTaGTATCTTTGGAATTCGAAT +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKSRVGI*YLWNSN
Trigger: ATTCGAATTCCAAAGATATCAAATGCCTACGCGAGA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAAATCATTATTGTACTaGTGGCTGACAGCGTACATG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSKSLLY*WLTAYM
Trigger: CATGTACGCTGTCAGCCATCAGTACAATAATGATTT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCAAATCATTATTGTACTaGTGGCTGACAGCGTACATG +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETKSLLY*WLTAYM
Trigger: CATGTACGCTGTCAGCCATCAGTACAATAATGATTT...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACATCTCAAGTTGGGTTaGACAACAAAATTCACAACG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEHLKLG*TTKFTT
Trigger: CGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCATCTCAAGTTGGGTTaGACAACAAAATTCACAACG +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSHLKLG*TTKFTT
Trigger: CGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGCAGCAACTATTTGTTaGAATAGGAGCAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSAATIC*NRSNLP
Trigger: TGGAAGATTGCTCCTATTTCAACAAATAGTTGCTGC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACACAAAATGAATGATTaGAGTACCAGCAGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEHKMND*STSSSH
Trigger: ATGGGAACTGCTGGTACTGCAATCATTCATTTTGTG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCTTAGGCCTTCCATTTaGTTTACATTCCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSLRPSI*FTFPKD
Trigger: GTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTATAACACTAAGCTCTaGGTTGGAAAAGATAACTCC +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHYNTKL*VGKDNS
Trigger: GGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATACAGATGTCTTCAGTaGATTGCAGAGTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEYRCLQ*IAEFPK
Trigger: CTTTGGAAACTCTGCAATGCACTGAAGACATCTGTA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATACGTTCCAGCATCTTaGGTTTTATTGGGGTTATTG +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIYVPAS*VLLGLL
Trigger: CAATAACCCCAATAAAACCCAAGATGCTGGAACGTA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTTTTGGAGACGCTTTTaGCTTACACTCAATGACAAC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSFWRRF*LTLNDN
Trigger: GTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTTTTGGAGACGCTTTTaGCTTACACTCAATGACAAC +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKFWRRF*LTLNDN
Trigger: GTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTTTTGGAGACGCTTTTaGCTTACACTCAATGACAAC +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETFWRRF*LTLNDN
Trigger: GTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCTAGCAGTTCCAAAATaGTTAGTGGCTATACAGGTA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSLAVPK*LVAIQV
Trigger: TACCTGTATAGCCACTAACCATTTTGGAACTGCTAG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTACCATTACCCTTGTTaGATCTTTCACTACCAAGTT +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHYHYPC*IFHYQV
Trigger: AACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAAACTTCCACCTGATATaGGGTTTTGGATTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQENFHLI*GFGFPL
Trigger: TAAAGGAAATCCAAAACCTCATATCAGGTGGAAGTT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAAACTTCCACCTGATATaGGGTTTTGGATTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETINFHLI*GFGFPL
Trigger: TAAAGGAAATCCAAAACCTCATATCAGGTGGAAGTT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCATTTAACTTCCACCTaGTATGAGGTTTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETHLTST*YEVLDF
Trigger: GAAATCCAAAACCTCATATCAGGTGGAAGTTAAATG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTTTTATTGGGGTTATTaGTCAACAAGCTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKFYWGY*STSSLQ
Trigger: TTGAAGGGAGCTTGTTGATCAATAACCCCAATAAAA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGTTCGTGATTTTTGTTaGTGTCTGATTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSVRDFC*CLISNC
Trigger: ACAGTTGGAAATCAGACATCAACAAAAATCACGAAC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGTTCGTGATTTTTGTTaGTGTCTGATTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: AYKATRLPIAKQNHQETIVRDFC*CLISNC
Trigger: ACAGTTGGAAATCAGACATCAACAAAAATCACGAAC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGTTCGTGATTTTTGTTaGTGTCTGATTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEVRDFC*CLISNC
Trigger: ACAGTTGGAAATCAGACATCAACAAAAATCACGAAC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGCTAACTCAGTTGAGTaGAAAGAAAATCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSANSVE*KENLPV
Trigger: TACAGGAAGATTTTCTTTTCACTCAACTGAGTTAGC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR TCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGCTAACTCAGTTGAGTaGAAAGAAAATCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETANSVE*KENLPV
Trigger: TACAGGAAGATTTTCTTTTCACTCAACTGAGTTAGC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTATAACACTAAGCTCTaGGTTGGAAAAGATAACTCC +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSYNTKL*VGKDNS
Trigger: GGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR GCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATATAACACTAAGCTCTaGGTTGGAAAAGATAACTCC +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEYNTKL*VGKDNS
Trigger: GGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAGACATTTTCTTCCATaGCCACGTGAATATCATTTA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHRHFLP*PREYHL
Trigger: TAAATGATATTCACGTGGCCATGGAAGAAAATGTCT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTACCATTACCCTTGTTaGATCTTTCACTACCAAGTT +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSYHYPC*IFHYQV
Trigger: AACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATACCATTACCCTTGTTaGATCTTTCACTACCAAGTT +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEYHYPC*IFHYQV
Trigger: AACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAAACTTCAATATCTGTaGCAGAAAGACTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSKLQYL*QKDFWQ
Trigger: TTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTCCTCCGTCGCTGAATaGCTTAATTTCTATTATATA +
Preference number: 4 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHSSVAE*LNFYYI
Trigger: TATATAATAGAAATTAAGCCATTCAGCGACGGAGGA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAGACATTTTCTTCCATaGCCACGTGAATATCATTTA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSRHFLP*PREYHL
Trigger: TAAATGATATTCACGTGGCCATGGAAGAAAATGTCT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAAGACATTTTCTTCCATaGCCACGTGAATATCATTTA +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQERHFLP*PREYHL
Trigger: TAAATGATATTCACGTGGCCATGGAAGAAAATGTCT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCCTCCGTCGCTGAATaGCTTAATTTCTATTATATA +
Preference number: 4 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSSVAE*LNFYYI
Trigger: TATATAATAGAAATTAAGCCATTCAGCGACGGAGGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTCCTCCGTCGCTGAATaGCTTAATTTCTATTATATA +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETSSVAE*LNFYYI
Trigger: TATATAATAGAAATTAAGCCATTCAGCGACGGAGGA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGAAACCATCTCAAGTTaGGTTGAACAACAAAATTCA +
Preference number: 4 (lower is better)
Translates to: KAYKATRLPIAKQNHQETETISS*VEQQNS
Trigger: TGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGAAACCATCTCAAGTTaGGTTGAACAACAAAATTCA +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEETISS*VEQQNS
Trigger: TGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CCA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACATTACAATGAGATTTaGGAATATTTCTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEHYNEI*EYFSLW
Trigger: CCACAAGGAGAAATATTCCCAAATCTCATTGTAATG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427331.5
CDS CCA 90 bp GGCAGAGACTGGGGAAGCCAGGTACCTTCCCTAAGAGCAGGCACCTaGCCTGTCGCTCGCCGCCGCAGCCTCAGCGCTCAGCAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GRDWGSQVPSLRAGT*PVARRRSLSAQQPA
Trigger: GGCTGGCTGCTGAGCGCTGAGGCTGCGGCGGCGAGCGACAGGCCAGGTGCCTGCTCTTAGGGAAGGTACCTGGCTTCCCCAGTCTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490876.1
CDS TCA 90 bp AGGGCGCACGGAGAGGGGGCAGTAGCCCGAACCAGTCGGAGGAGCTaGCTTGAAGGCTTCCCGCAGCATTCCGGGCTCTCGGTTCCTTGT +
Preference number: 5 (lower is better)
Translates to: RAHGEGAVARTSRRS*LEGFPQHSGLSVPC
Trigger: ACAAGGAACCGAGAGCCCGGAATGCTGCGGGAAGCCTTCAAGTCAGCTCCTCCGACTGGTTCGGGCTACTGCCCCCTCTCCGTGCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS CCA 90 bp GTTGCTGGAAACGAATGCCACCCAACAGGCTCCCGCGGCAGAGACTaGGGAAGCCAGGTACCTTCCCTAAGAGCAGGCACCTGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: VAGNECHPTGSRGRD*GSQVPSLRAGTWPV
Trigger: GACAGGCCAGGTGCCTGCTCTTAGGGAAGGTACCTGGCTTCCCCAGTCTCTGCCGCGGGAGCCTGTTGGGTGGCATTCGTTTCCAGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490876.1
CDS TCA 90 bp GCACGGAGAGGGGGCAGTAGCCCGAACCAGTCGGAGGAGCTGACTTaGAGGCTTCCCGCAGCATTCCGGGCTCTCGGTTCCTTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: ARRGGSSPNQSEELT*RLPAAFRALGSLFC
Trigger: ACAAAACAAGGAACCGAGAGCCCGGAATGCTGCGGGAAGCCTTCAAGTCAGCTCCTCCGACTGGTTCGGGCTACTGCCCCCTCTCCGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS CCA 90 bp CAGCTGGGACTAGAGATGCTGAACTGCTCTCCGCTGCGCGCTGCATaGCTCTCCGCCAGCATTCATCAAGGAGGACCCAGCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: QLGLEMLNCSPLRAA*LSASIHQGGPSFLA
Trigger: AGCCAGGAAGCTGGGTCCTCCTTGATGAATGCTGGCGGAGAGCCATGCAGCGCGCAGCGGAGAGCAGTTCAGCATCTCTAGTCCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS GCA 90 bp TTCTCAGCTGGGACTAGAGATGCTGAACTGCTCTCCGCTGCGCGCTaGATGGCTCTCCGCCAGCATTCATCAAGGAGGACCCAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: FSAGTRDAELLSAAR*MALRQHSSRRTQLP
Trigger: AGGAAGCTGGGTCCTCCTTGATGAATGCTGGCGGAGAGCCATGCAGCGCGCAGCGGAGAGCAGTTCAGCATCTCTAGTCCCAGCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS TCA 90 bp GAATCTCGGGTGCTACTCACGAGCTTCTTCTGTTCTCCGTTTCTCTaGGGGGCGGCTGGGCTCCCCAATCCCAATCACGTTGGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: ESRVLLTSFFCSPFL*GAAGLPNPNHVGCN
Trigger: GTTGCAGCCAACGTGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGAAACGGAGAACAGAAGAAGCTCGTGAGTAGCACCCGAGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430505.6
CDS CCA 90 bp TTGAAGGCTTCCCGCAGCATTCCGGGCTCTCGGTTCCTTGTTTTGTaGCTGCCTCGCAGCGCAACAAACTTATTTTCCGGCTCAGCACCG +
Preference number: 5 (lower is better)
Translates to: LKASRSIPGSRFLVL*LPRSATNLFSGSAP
Trigger: CGGTGCTGAGCCGGAAAATAAGTTTGTTGCGCTGCGAGGCAGCCACAAAACAAGGAACCGAGAGCCCGGAATGCTGCGGGAAGCCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS-3UTR CAA 90 bp CCACCACTGACATTCGCTGGTGTGACTTCGGGGAGAGCTTCTTCTGTTCTCCGTGACTGTACTGACTGCTaGCCAGCCCACGGAGAATGG +
Preference number: 5 (lower is better)
Translates to: PPLTFAGVTSGRASSVLRDCTDC*PAHGEW
Trigger: CCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTC...ACGGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS TCA 90 bp TTTCTCATGAATGCCACCCAAATCACCTCCAGGTGCCTGTCTTCATaGCACACTGTTCTTTTTCACCCACTCAGCACCGGGGCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: FLMNATQITSRCLSS*HTVLFHPLSTGAPG
Trigger: GCCCGGCGCCCCGGTGCTGAGTGGGTGAAAAAGAACAGTGTGTCATGAAGACAGGCACCTGGAGGTGATTTGGGTGGCATTCATGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418658.6
ENST00000455083.5
CDS-3UTR CAA 90 bp CCCACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGGTCGGAGGAGCTGACTaGAAGGCTTCCCGCAGCATT +
Preference number: 5 (lower is better)
Translates to: PTTVAVNVFPSMSSGTVLVGGAD*KASRSI
Trigger: AATGCTGCGGGAAGCCTTCAAGTCAGCTCCTCCGAC...CAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS GCA 90 bp GAGATAATGGGACCATATTCTCAGCTGGGACTAGAGATGCTGAACTaGTCTCCGCTGCGCGCTGCATGGCTCTCCGCCAGCATTCATCAA +
Preference number: 5 (lower is better)
Translates to: EIMGPYSQLGLEMLN*SPLRAAWLSASIHQ
Trigger: TTGATGAATGCTGGCGGAGAGCCATGCAGCGCGCAGCGGAGAGCAGTTCAGCATCTCTAGTCCCAGCTGAGAATATGGTCCCATTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGGTGGCCCCAGGACCTaGTGGTTTGTCACGGTATTG +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIGGPRT*WFVTVL
Trigger: CAATACCGTGACAAACCACAAGGTCCTGGGGCCACC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGGCGAAAGCTCCCTACTaGCAGCCAATCCTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWAKAPY*QPILAS
Trigger: CGACGCCAGGATTGGCTGCAAGTAGGGAGCTTTCGC...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTTCTCGGTTCCTTGTTTaGTGGCTGCCTCGCAGCGCA +
Preference number: 5 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTSRFLV*WLPRSA
Trigger: TGCGCTGCGAGGCAGCCACAAAACAAGGAACCGAGA...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTCGGGCTCTCGGTTCCTaGTTTTGTGGCTGCCTCGCA +
Preference number: 5 (lower is better)
Translates to: AERLLAKILAGGLVGSSSRALGS*FCGCLA
Trigger: TGCGAGGCAGCCACAAAACAAGGAACCGAGAGCCCG...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS CCA 90 bp ATGTTTGGCTCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTTaGTCCACCAGGCTGGCCTTAGAGAGGAGCAGAGCCACTACCAAA +
Preference number: 5 (lower is better)
Translates to: MFGSFPSAMATSRAS*STRLALERSRATTK
Trigger: TTTGGTAGTGGCTCTGCTCCTCTCTAAGGCCAGCCTGGTGGACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CAA 90 bp AGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCAGAAGGTGGCCCCAGGACCTaGTGGTTTGTCACGGTATTG +
Preference number: 5 (lower is better)
Translates to: RLLAKILAGGLVGSSSAEGGPRT*WFVTVL
Trigger: CAATACCGTGACAAACCACAAGGTCCTGGGGCCACC...TTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCATAACCAGTTCAGATTaGCTGCCTCCGCCACCACTG +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIITSSD*LPPPPL
Trigger: CAGTGGTGGCGGAGGCAGCAAATCTGAACTGGTTAT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTCAGGGATGGGAATATaGCACAAGGTGCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEISGMGI*HKVPLG
Trigger: CCCAAGAGGCACCTTGTGCAATATTCCCATCCCTGA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS TCA 90 bp CTTGAGAAACAAAGCGGCGATTATCCTGATAGGAAGGGTATTCATTaGAGATCCAGGCATAACTCAGCTCTCCAGAATGGGGTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: LEKQSGDYPDRKGIH*RSRHNSALQNGVAG
Trigger: GCCCGCCACCCCATTCTGGAGAGCTGAGTTATGCCTGGATCTTCAATGAATACCCTTCCTATCAGGATAATCGCCGCTTTGTTTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000438282.6
CDS-3UTR CAA 90 bp AAGGGAGAGAAGGGGTGCACGCTCTCATTCCTGAACACGTATCTAGAGGCATCACAGATTCCCAGTCTCTaGAGAAACAAAGCGGCGATT +
Preference number: 5 (lower is better)
Translates to: KGEKGCTLSFLNTYLEASQIPSL*RNKAAI
Trigger: AATCGCCGCTTTGTTTCTCAAGAGACTGGGAATCTG...TGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCATACTGGCTGGTGGTTaGGTGGGTTCTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIILAGG*VGSSSA
Trigger: TGCAGAAGAAGAACCCACCAAACCACCAGCCAGTAT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS GCA 90 bp CGCAGGCTGCTTGACGTCTCCCTTTCTCTCTTCTATGTATTGTTCTaGTTGTCTTTAGCCTACCCCTTTACTTTGTGCTTCCCGTATCCC +
Preference number: 5 (lower is better)
Translates to: RRLLDVSLSLFYVLF*LSLAYPFTLCFPYP
Trigger: GGGATACGGGAAGCACAAAGTAAAGGGGTAGGCTAAAGACAAGCAGAACAATACATAGAAGAGAGAAAGGGAGACGTCAAGCAGCCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480113.1
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCTTTTAGGGAAGCTCTaGAAGACACATGCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEILLGKL*KTHAVE
Trigger: CTCCACAGCATGTGTCTTCAAGAGCTTCCCTAAAAG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397461.5
ENST00000418658.6
CDS-3UTR CAA 90 bp CAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGTTGTTCCAAACGAGTTaGTCGCTGTGCACTGGTACG +
Preference number: 5 (lower is better)
Translates to: QKDFWQRYWLVVWWVLLLLFQTS*SLCTGT
Trigger: CGTACCAGTGCACAGCGACAAACTCGTTTGGAACAA...CAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTTGGCTTTCCTTGCTATaGGCTTTCCATCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTWLSLL*AFHQLF
Trigger: GAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCCA...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGGGGTACCATTACCCTaGTTGGATCTTTCACTACCA +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIGVPLP*LDLSLP
Trigger: TGGTAGTGAAAGATCCAACAAGGGTAATGGTACCCC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTGGGGTACCATTACCCTaGTTGGATCTTTCACTACCA +
Preference number: 5 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTAGVPLP*LDLSLP
Trigger: TGGTAGTGAAAGATCCAACAAGGGTAATGGTACCCC...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCATAGCCTGTCCACACTaGTTTGGACCATGCAGACAT +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIIACPH*FGPCRH
Trigger: ATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTAT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp TGTCTAGCGAGTGATCATGCGTTACCTGGCACGGTAAAACAATACTCTCTCCAACCAATCCCAATCACGTaGGCTGCAACTGTGCGGAAT +
Preference number: 5 (lower is better)
Translates to: CLASDHALPGTVKQYSLQPIPIT*AATVRN
Trigger: ATTCCGCACAGTTGCAGCCAACGTGATTGGGATTGG...TTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp TGTCTAGCGAGTGATCATGCGTTACCTGGCACGGTAAAACAATACTCTCTCCAAATAACCAGTTCAGATTaGCTGCCTCCGCCACCACTG +
Preference number: 5 (lower is better)
Translates to: CLASDHALPGTVKQYSLQITSSD*LPPPPL
Trigger: CAGTGGTGGCGGAGGCAGCAAATCTGAACTGGTTAT...TTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS TCA 90 bp TCAAACGCTTTTCCTAAGGAACAGCAGCTGGCAGAACAGATGATCTaGATCTCGGGTGCTACTCACGAGCTTCTTCTGTTCTCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: SNAFPKEQQLAEQMI*ISGATHELLLFSVS
Trigger: AGAAACGGAGAACAGAAGAAGCTCGTGAGTAGCACCCGAGATTCAGATCATCTGTTCTGCCAGCTGCTGTTCCTTAGGAAAAGCGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430505.6
CDS TCA 90 bp AGAATTCAAACGCTTTTCCTAAGGAACAGCAGCTGGCAGAACAGATaGTCTGAATCTCGGGTGCTACTCACGAGCTTCTTCTGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: RIQTLFLRNSSWQNR*SESRVLLTSFFCSP
Trigger: CGGAGAACAGAAGAAGCTCGTGAGTAGCACCCGAGATTCAGATCATCTGTTCTGCCAGCTGCTGTTCCTTAGGAAAAGCGTTTGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430505.6
CDS GCA 90 bp GACCAGAAGTCAGTCTGTGAACCTGCAAGGCACAAAATGAATGATTaGAGTACCAGCAGTTCCCATGGCAACCTCATCTTCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: DQKSVCEPARHKMND*STSSSHGNLIFSFR
Trigger: TCGGAAACTGAAGATGAGGTTGCCATGGGAACTGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAGGTTCACAGACTGACTTCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434053.5
CDS-3UTR CAA 90 bp CAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGCTTTTAGGGAAGCTCTaGAAGACACATGCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: QKDFWQRYWLVVWWVLLLLLGKL*KTHAVE
Trigger: CTCCACAGCATGTGTCTTCAAGAGCTTCCCTAAAAG...CAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCAGGTGTAAACAGGTTTaGGAGACGCTTTTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIRCKQV*ETLLAY
Trigger: GTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCCTGTCCACACTTGTTaGGACCATGCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIPVHTC*DHADIF
Trigger: AAATATGTCTGCATGGTCCAAACAAGTGTGGACAGG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGATAGCCTGTCCACACTaGTTTGGACCATGCAGACAT +
Preference number: 5 (lower is better)
Translates to: QKDFWQRYWLVVWWVLLLIACPH*FGPCRH
Trigger: ATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTAT...CAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp TCTCCAGGAGAGCTGAGCAGTGGTATCTGTGATTTCGTCTATTGTCACAGCCTCGAATGGAGTCCTGGCTaGAATGACATACATGGTGAT +
Preference number: 5 (lower is better)
Translates to: SPGELSSGICDFVYCHSLEWSPG*NDIHGD
Trigger: ATCACCATGTATGTCATTCAAGCCAGGACTCCATTC...GAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp TTCATATTCAACCCAAGGGTTCAAACCCACCACGGTCGCTGTGAATGTCTTCCCGGGCCTTCTCCTTTGTaGTTGAAGACACCTACTTTA +
Preference number: 5 (lower is better)
Translates to: FIFNPRVQTHHGRCECLPGPSPL*LKTPTL
Trigger: TAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCC...GGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTGGGTTGAATATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCAAAGGGCCTTCTCCTTaGTTGTTGAAGACACCTACT +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIKGPSP*LLKTPT
Trigger: AGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCTTGCATACAACAGCCTaGAGTTACGGACCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEILHTTA*SYGPSL
Trigger: AAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCAA...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTTGGTCTATTTCCCTGCTGAGTaGCAGGAACATGTGACCTGT +
Preference number: 5 (lower is better)
Translates to: MHVWLFSFCNGNVQSILVYFPAE*QEHVTC
Trigger: ACAGGTCACATGTTCCTGCAACTCAGCAGGGAAATA...GACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS TCA 90 bp TCTCTTGCTGTACAAGTGGACCTAATGAAGAAAACAACTCTTGATTaGAACCCGTTGCGTGTTCAGCTGGGCTTCTCCTGGCCTGATTTC +
Preference number: 5 (lower is better)
Translates to: SLAVQVDLMKKTTLD*NPLRVQLGFSWPDF
Trigger: GAAATCAGGCCAGGAGAAGCCCAGCTGAACACGCAACGGGTTTCAATCAAGAGTTGTTTTCTTCATTAGGTCCACTTGTACAGCAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430505.6
CDS GCA 90 bp GTCCTATCTCCAGCAGTCATGAATTGTGGCTCTTCTCCCAGTTACTaGTACAGAAAAATTTGTGTCGCAGAACCACACCATTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: VLSPAVMNCGSSPSY*YRKICVAEPHHLPG
Trigger: TCCAGGCAAATGGTGTGGTTCTGCGACACAAATTTTTCTGTAGCAGTAACTGGGAGAAGAGCCACAATTCATGACTGCTGGAGATAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473173.1
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGTACGTTCCAGCATCTaGGGTTTTATTGGGGTTATT +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIVRSSI*GFIGVI
Trigger: AATAACCCCAATAAAACCCAAGATGCTGGAACGTAC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCACTTCACCTCCCACTTaGACAAGAGTTACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEITSPPT*TRVTLF
Trigger: GAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTAGGTGTAAACAGGTTTaGGAGACGCTTTTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: AERLLAKILAGGLVGSSSRCKQV*ETLLAY
Trigger: GTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCT...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp TTCGTCCTCTATTCTTCTCCAGTGGGGAGGCCCAGAAAACTTCAATATCTGTGGCCTGTCCACACTTGTTaGGACCATGCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: FVLYSSPVGRPRKLQYLWPVHTC*DHADIF
Trigger: AAATATGTCTGCATGGTCCAAACAAGTGTGGACAGG...CCACAGATATTGAAGTTTTCTGGGCCTCCCCACTGGAGAAGAATAGAGGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGATGTCTTCAGTGCATaGCAGAGTTTCCAAAGAAAC +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIDVFSA*QSFQRN
Trigger: GTTTCTTTGGAAACTCTGCAATGCACTGAAGACATC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCATTGAGCTTTTGAGATaGCAGCCATTCCTGAAACCA +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIIELLR*QPFLKP
Trigger: TGGTTTCAGGAATGGCTGCAATCTCAAAAGCTCAAT...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS TCA 90 bp CTGTGCACTGGTACGTTCCAGCATCTTGGGTTTTATTGGGGTTATTaGTCAACAAGCTCCCTTCAACAACACTGTAGCGGAAATCCATAC +
Preference number: 5 (lower is better)
Translates to: LCTGTFQHLGFYWGY*STSSLQQHCSGNPY
Trigger: GTATGGATTTCCGCTACAGTGTTGTTGAAGGGAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCAGTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000434053.5
ENST00000438282.6
CDS CCA 90 bp GTTCCAAACGAGTTTGTCGCTGTGCACTGGTACGTTCCAGCATCTTaGGTTTTATTGGGGTTATTGATCAACAAGCTCCCTTCAACAACA +
Preference number: 5 (lower is better)
Translates to: VPNEFVAVHWYVPAS*VLLGLLINKLPSTT
Trigger: TGTTGTTGAAGGGAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCAGTGCACAGCGACAAACTCGTTTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000434053.5
ENST00000438282.6
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCGTTTTATTGGGGTTATaGATCAACAAGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIVLLGL*INKLPS
Trigger: TGAAGGGAGCTTGTTGATCAATAACCCCAATAAAAC...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGTTTTATTGGGGTTATaGATCAACAAGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTVLLGL*INKLPS
Trigger: TGAAGGGAGCTTGTTGATCAATAACCCCAATAAAAC...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp GCAGAAAGACTTCTGGCAAAGATACTGGCTGGTGGTTTGGTGGGTTCTTCTTCTGTACGTTCCAGCATCTaGGGTTTTATTGGGGTTATT +
Preference number: 5 (lower is better)
Translates to: AERLLAKILAGGLVGSSSVRSSI*GFIGVI
Trigger: AATAACCCCAATAAAACCCAAGATGCTGGAACGTAC...AGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGGTGGCCCCAGGACCTaGTGGTTTGTCACGGTATTG +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQGGPRT*WFVTVL
Trigger: CAATACCGTGACAAACCACAAGGTCCTGGGGCCACC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTGCTTCTCAAGAATTCCATTaGACTTGTGTCTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: TVAVNVFPSMSSGTVLTASQEFH*TCVFWL
Trigger: AAGCCAGAAGACACAAGTCAAATGGAATTCTTGAGA...AGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp ATGCATGTTTGGCTCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTTGGTCACACTAAGCTCTGCGTaGGAAAAGATAACTCCATGT +
Preference number: 5 (lower is better)
Translates to: MHVWLFSFCNGNVQSILVTLSSA*EKITPC
Trigger: ACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGT...GACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CAA 90 bp AAGGGAGAGAAGGGGTGCACGCTCTCATTCCTGAACACGTATCTAGAGGCATCATTTTCAAGAGTGTTCTaGAAAAATCTGGACCTACAG +
Preference number: 5 (lower is better)
Translates to: KGEKGCTLSFLNTYLEASFSRVF*KNLDLQ
Trigger: CTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAA...TGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp TCCAGGCACATAGCAAGATTATATTTCCCTGCTGAGTTGCAGGAACATGTGACCAGGTGTAAACAGGTTTaGGAGACGCTTTTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: SRHIARLYFPAELQEHVTRCKQV*ETLLAY
Trigger: GTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCT...GGTCACATGTTCCTGCAACTCAGCAGGGAAATATAATCTTGCTATGTGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CAA 90 bp CATACAACAGCCTTGAGTTACGGACCAAGTCTTCCGCTGTTCTGCCATGAGATCCATCTGTACAAGACTTaGTATCCTTTTACTTCCGAC +
Preference number: 5 (lower is better)
Translates to: HTTALSYGPSLPLFCHEIHLYKT*YPFTSD
Trigger: GTCGGAAGTAAAAGGATACAAAGTCTTGTACAGATG...GATCTCATGGCAGAACAGCGGAAGACTTGGTCCGTAACTCAAGGCTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGCGAAAGCTCCCTACTaGCAGCCAATCCTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEAKAPY*QPILAS
Trigger: CGACGCCAGGATTGGCTGCAAGTAGGGAGCTTTCGC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418658.6
CDS-3UTR CAA 90 bp TCCAGGCACATAGCAAGATTATATTTCCCTGCTGAGTTGCAGGAACATGTGACCAGAACCCATGCATGTTaGGCTCTTTTCCTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: SRHIARLYFPAELQEHVTRTHAC*ALFLLQ
Trigger: TTGCAGAAGGAAAAGAGCCAAACATGCATGGGTTCT...GGTCACATGTTCCTGCAACTCAGCAGGGAAATATAATCTTGCTATGTGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGGTGGCCCCAGGACCTaGTGGTTTGTCACGGTATTG +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIGGPRT*WFVTVL
Trigger: CAATACCGTGACAAACCACAAGGTCCTGGGGCCACC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp TCCAGGCACATAGCAAGATTATATTTCCCTGCTGAGTTGCAGGAACATGTGACCACTTCACCTCCCACTTaGACAAGAGTTACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SRHIARLYFPAELQEHVTTSPPT*TRVTLF
Trigger: GAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGT...GGTCACATGTTCCTGCAACTCAGCAGGGAAATATAATCTTGCTATGTGCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CAA 90 bp ACCACGGTCGCTGTGAATGTCTTCCCATCAATGAGTTCTGGGACTGTACTGACTTCTGATTTAGTAACGTaGATGATTCTGAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: TTVAVNVFPSMSSGTVLTSDLVT*MILRFP
Trigger: TGGAAACCTCAGAATCATCAACGTTACTAAATCAGA...AGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CTCCCAGCGTCTGATTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAACCCAGCATGCTTCAGTaGGATGTTTCGGATCATCAA +
Preference number: 5 (lower is better)
Translates to: LPASDLVTLMILRFPSSEPSMLQ*DVSDHQ
Trigger: TTGATGATCCGAAACATCCAACTGAAGCATGCTGGG...TTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGACTGTACTGACTGCTaGCCAGCCCACGGAGAATGG +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSDCTDC*PAHGEW
Trigger: CCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGACTGTACTGACTGCTaGCCAGCCCACGGAGAATGG +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIDCTDC*PAHGEW
Trigger: CCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGACTGTACTGACTGCTaGCCAGCCCACGGAGAATGG +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEDCTDC*PAHGEW
Trigger: CCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAATAACCAGTTCAGATTaGCTGCCTCCGCCACCACTG +
Preference number: 5 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTITSSD*LPPPPL
Trigger: CAGTGGTGGCGGAGGCAGCAAATCTGAACTGGTTAT...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS TCA 90 bp CTTGAGAAACAAAGCGGCGATTATCCTGATAGGAAGGGTATTCATTaGAGATCCAGGCATAACTCAGCTCTCTTTAAGTCAAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: LEKQSGDYPDRKGIH*RSRHNSALFKSRAK
Trigger: CTTAGCCCTTGACTTAAAGAGAGCTGAGTTATGCCTGGATCTTCAATGAATACCCTTCCTATCAGGATAATCGCCGCTTTGTTTCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473058.1
CDS-3UTR CAA 90 bp TGTCTAGCGAGTGATCATGCGTTACCTGGCACGGTAAAACAATACTCTCTCCAAGCATCTTGGGTTTTATaGGGGTTATTGATCAACAAG +
Preference number: 5 (lower is better)
Translates to: CLASDHALPGTVKQYSLQASWVL*GLLINK
Trigger: CTTGTTGATCAATAACCCCAATAAAACCCAAGATGC...TTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCCAATCCCAATCACGTaGGCTGCAACTGTGCGGAAT +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQPIPIT*AATVRN
Trigger: ATTCCGCACAGTTGCAGCCAACGTGATTGGGATTGG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTCATTTACACTGGGGTaGGGAACTCCCTGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQSFTLG*GTPWVS
Trigger: TGACACCCAGGGAGTTCCCAACCCCAGTGTAAATGA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTCACCGTTGCTCCTTTaGCAGTCGGAACTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHSPLLL*QSELFL
Trigger: CAGAAACAGTTCCGACTGCAAAAGGAGCAACGGTGA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGATTCCAGCTTCACCGTaGCTCCTTTTGCAGTCGGAA +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQIPASP*LLLQSE
Trigger: TTCCGACTGCAAAAGGAGCAACGGTGAAGCTGGAAT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACATTCCAGCTTCACCGTaGCTCCTTTTGCAGTCGGAA +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHIPASP*LLLQSE
Trigger: TTCCGACTGCAAAAGGAGCAACGGTGAAGCTGGAAT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CTCCCAGCGTCTGATTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAAACACTAAGCTCTGCGTaGGAAAAGATAACTCCATGT +
Preference number: 5 (lower is better)
Translates to: LPASDLVTLMILRFPSSETLSSA*EKITPC
Trigger: ACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGT...TTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp TCCAGGCACATAGCAAGATTATATTTCCCTGCTGAGTTGCAGGAACATGTGACCTTTTCAAGAGTGTTCTaGAAAAATCTGGACCTACAG +
Preference number: 5 (lower is better)
Translates to: SRHIARLYFPAELQEHVTFSRVF*KNLDLQ
Trigger: CTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAA...GGTCACATGTTCCTGCAACTCAGCAGGGAAATATAATCTTGCTATGTGCCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCAATCCCAATCACGTaGGCTGCAACTGTGCGGAAT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPIPIT*AATVRN
Trigger: ATTCCGCACAGTTGCAGCCAACGTGATTGGGATTGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACCAATCCCAATCACGTaGGCTGCAACTGTGCGGAAT +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEPIPIT*AATVRN
Trigger: ATTCCGCACAGTTGCAGCCAACGTGATTGGGATTGG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCATAACCAGTTCAGATTaGCTGCCTCCGCCACCACTG +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSITSSD*LPPPPL
Trigger: CAGTGGTGGCGGAGGCAGCAAATCTGAACTGGTTAT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGATAACCAGTTCAGATTaGCTGCCTCCGCCACCACTG +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKITSSD*LPPPPL
Trigger: CAGTGGTGGCGGAGGCAGCAAATCTGAACTGGTTAT...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CTCCCAGCGTCTGATTTAGTAACGTTGATGATTCTGAGGTTTCCATCTTCAGAACCTTCTCCTTTGTTGTaGAAGACACCTACTTTAACC +
Preference number: 5 (lower is better)
Translates to: LPASDLVTLMILRFPSSEPSPLL*KTPTLT
Trigger: GGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGG...TTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CTGTCAAAGTCTATCAGGTGTCCATTAAATGACCAAGTAAACACGATGTCTAGCAAAGGGCCTTCTCCTTaGTTGTTGAAGACACCTACT +
Preference number: 5 (lower is better)
Translates to: LSKSIRCPLNDQVNTMSSKGPSP*LLKTPT
Trigger: AGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTT...GCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTGCACAAGGTGCCTCTaGGGCAGTACATTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQCTRCL*GSTLSF
Trigger: AAAGCTCAATGTACTGCCCAAGAGGCACCTTGTGCA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATCAGGGATGGGAATATaGCACAAGGTGCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQESGMGI*HKVPLG
Trigger: CCCAAGAGGCACCTTGTGCAATATTCCCATCCCTGA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCATTTACACTGGGGTaGGGAACTCCCTGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSFTLG*GTPWVS
Trigger: TGACACCCAGGGAGTTCCCAACCCCAGTGTAAATGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATCATTTACACTGGGGTaGGGAACTCCCTGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQESFTLG*GTPWVS
Trigger: TGACACCCAGGGAGTTCCCAACCCCAGTGTAAATGA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTTGTTCCAAACGAGTTaGTCGCTGTGCACTGGTACG +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSLFQTS*SLCTGT
Trigger: CGTACCAGTGCACAGCGACAAACTCGTTTGGAACAA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTTGTTCCAAACGAGTTaGTCGCTGTGCACTGGTACG +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETLFQTS*SLCTGT
Trigger: CGTACCAGTGCACAGCGACAAACTCGTTTGGAACAA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCAGATTCCCAGTCTCTaGAGAAACAAAGCGGCGATT +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQQIPSL*RNKAAI
Trigger: AATCGCCGCTTTGTTTCTCAAGAGACTGGGAATCTG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTCACCGTTGCTCCTTTaGCAGTCGGAACTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKSPLLL*QSELFL
Trigger: CAGAAACAGTTCCGACTGCAAAAGGAGCAACGGTGA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAATTCCAGCTTCACCGTaGCTCCTTTTGCAGTCGGAA +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEIPASP*LLLQSE
Trigger: TTCCGACTGCAAAAGGAGCAACGGTGAAGCTGGAAT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTGGCTTTCCTTGCTATaGGCTTTCCATCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHWLSLL*AFHQLF
Trigger: GAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCCA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CTGTCAAAGTCTATCAGGTGTCCATTAAATGACCAAGTAAACACGATGTCTAGCACTTCACCTCCCACTTaGACAAGAGTTACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LSKSIRCPLNDQVNTMSSTSPPT*TRVTLF
Trigger: GAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGT...GCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp CTGTCAAAGTCTATCAGGTGTCCATTAAATGACCAAGTAAACACGATGTCTAGCGTACCATTACCCTTGTaGGATCTTTCACTACCAAGT +
Preference number: 5 (lower is better)
Translates to: LSKSIRCPLNDQVNTMSSVPLPL*DLSLPS
Trigger: ACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTAC...GCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGGGGTACCATTACCCTaGTTGGATCTTTCACTACCA +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHGVPLP*LDLSLP
Trigger: TGGTAGTGAAAGATCCAACAAGGGTAATGGTACCCC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCCCAGCATGCTTCAGTaGGATGTTTCGGATCATCAA +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHPSMLQ*DVSDHQ
Trigger: TTGATGATCCGAAACATCCAACTGAAGCATGCTGGG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACATAGCCTGTCCACACTaGTTTGGACCATGCAGACAT +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHIACPH*FGPCRH
Trigger: ATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTAT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCATACTGGCTGGTGGTTaGGTGGGTTCTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSILAGG*VGSSSA
Trigger: TGCAGAAGAAGAACCCACCAAACCACCAGCCAGTAT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAATACTGGCTGGTGGTTaGGTGGGTTCTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIILAGG*VGSSSA
Trigger: TGCAGAAGAAGAACCCACCAAACCACCAGCCAGTAT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp TGCTTTACATTCCCAAAAGACATTTTCTTCCATGGCCACGTGAATATCATTTATATACTGGCTGGTGGTTaGGTGGGTTCTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: CFTFPKDIFFHGHVNIIYILAGG*VGSSSA
Trigger: TGCAGAAGAAGAACCCACCAAACCACCAGCCAGTAT...ATAAATGATATTCACGTGGCCATGGAAGAAAATGTCTTTTGGGAATGTAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427741.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTTTCGGGTTGTCACATaGACTGTTGCACTAGAGGGG +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSFRVVT*TVALEG
Trigger: CCCCTCTAGTGCAACAGTCAATGTGACAACCCGAAA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTTTCGGGTTGTCACATaGACTGTTGCACTAGAGGGG +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKFRVVT*TVALEG
Trigger: CCCCTCTAGTGCAACAGTCAATGTGACAACCCGAAA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTTTCGGGTTGTCACATaGACTGTTGCACTAGAGGGG +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETFRVVT*TVALEG
Trigger: CCCCTCTAGTGCAACAGTCAATGTGACAACCCGAAA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACAATCCAGGGCCTTCACTaGATCCCAATTCAGGATAAT +
Preference number: 5 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTIQGLH*IPIQDN
Trigger: ATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGAT...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTGCACAAGGTGCCTCTaGGGCAGTACATTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSCTRCL*GSTLSF
Trigger: AAAGCTCAATGTACTGCCCAAGAGGCACCTTGTGCA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS TCA 90 bp CATCGAAAGGCAAAGAAAGCTCCACCGATGTTTTATTTGTTTCAATaGCAGATGTGCTGCTTTGTCTGTTCCATCTGTACAAGACTTTGT +
Preference number: 5 (lower is better)
Translates to: HRKAKKAPPMFYLFQ*QMCCFVCSICTRLC
Trigger: ACAAAGTCTTGTACAGATGGAACAGACAAAGCAGCACATCTGTCATTGAAACAAATAAAACATCGGTGGAGCTTTCTTTGCCTTTCGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
ENST00000484686.1
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCTTTTAGGGAAGCTCTaGAAGACACATGCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKLLGKL*KTHAVE
Trigger: CTCCACAGCATGTGTCTTCAAGAGCTTCCCTAAAAG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397461.5
ENST00000418658.6
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCAGATTCCCAGTCTCTaGAGAAACAAAGCGGCGATT +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKQIPSL*RNKAAI
Trigger: AATCGCCGCTTTGTTTCTCAAGAGACTGGGAATCTG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTGGCTTTCCTTGCTATaGGCTTTCCATCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETWLSLL*AFHQLF
Trigger: GAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCCA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGGGGTACCATTACCCTaGTTGGATCTTTCACTACCA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSGVPLP*LDLSLP
Trigger: TGGTAGTGAAAGATCCAACAAGGGTAATGGTACCCC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGGGGTACCATTACCCTaGTTGGATCTTTCACTACCA +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEGVPLP*LDLSLP
Trigger: TGGTAGTGAAAGATCCAACAAGGGTAATGGTACCCC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCCAGCATGCTTCAGTaGGATGTTTCGGATCATCAA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPSMLQ*DVSDHQ
Trigger: TTGATGATCCGAAACATCCAACTGAAGCATGCTGGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCCCAGCATGCTTCAGTaGGATGTTTCGGATCATCAA +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKPSMLQ*DVSDHQ
Trigger: TTGATGATCCGAAACATCCAACTGAAGCATGCTGGG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATACCCAGCATGCTTCAGTaGGATGTTTCGGATCATCAA +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIPSMLQ*DVSDHQ
Trigger: TTGATGATCCGAAACATCCAACTGAAGCATGCTGGG...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCCTGTCCACACTTGTTaGGACCATGCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHPVHTC*DHADIF
Trigger: AAATATGTCTGCATGGTCCAAACAAGTGTGGACAGG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCATAGCCTGTCCACACTaGTTTGGACCATGCAGACAT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSIACPH*FGPCRH
Trigger: ATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTAT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGGGCCTTCTCCTTTGTaGTTGAAGACACCTACTTTA +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHGPSPL*LKTPTL
Trigger: TAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAAGGGCCTTCTCCTTaGTTGTTGAAGACACCTACT +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHKGPSP*LLKTPT
Trigger: AGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGATCCAGGGCCTTCACTaGATCCCAATTCAGGATAAT +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQIQGLH*IPIQDN
Trigger: ATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGAT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACATCCAGGGCCTTCACTaGATCCCAATTCAGGATAAT +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHIQGLH*IPIQDN
Trigger: ATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGAT...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTTGCATACAACAGCCTaGAGTTACGGACCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHLHTTA*SYGPSL
Trigger: AAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCAA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTTGCATACAACAGCCTaGAGTTACGGACCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQLHTTA*SYGPSL
Trigger: AAGACTTGGTCCGTAACTCAAGGCTGTTGTATGCAA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCAGTACATTGAGCTTTaGAGATTGCAGCCATTCCTG +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQQYIEL*RLQPFL
Trigger: CAGGAATGGCTGCAATCTCAAAAGCTCAATGTACTG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS TCA 90 bp ACTTTGTATCCTTTTACTTCCGACTCATTATCCAGGGCCTTCACTTaGTCCCAATTCAGGATAATTTTGGAGTCTGATGAATTCCATATG +
Preference number: 5 (lower is better)
Translates to: TLYPFTSDSLSRAFT*SQFRIILESDEFHM
Trigger: CATATGGAATTCATCAGACTCCAAAATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGATAATGAGTCGGAAGTAAAAGGATACAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
ENST00000484686.1
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTACAGGACTTGGTTCTaGAATAAAAATCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHYRTWF*NKNRAM
Trigger: CATGGCCCGATTTTTATTCAAGAACCAAGTCCTGTA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGTACGTTCCAGCATCTaGGGTTTTATTGGGGTTATT +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHVRSSI*GFIGVI
Trigger: AATAACCCCAATAAAACCCAAGATGCTGGAACGTAC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGACTTCACCTCCCACTTaGACAAGAGTTACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQTSPPT*TRVTLF
Trigger: GAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAGGTGTAAACAGGTTTaGGAGACGCTTTTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSRCKQV*ETLLAY
Trigger: GTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCAGGTGTAAACAGGTTTaGGAGACGCTTTTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETRCKQV*ETLLAY
Trigger: GTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCT...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGTACCATTACCCTTGTaGGATCTTTCACTACCAAGT +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQVPLPL*DLSLPS
Trigger: ACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTAC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGTACCATTACCCTTGTaGGATCTTTCACTACCAAGT +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHVPLPL*DLSLPS
Trigger: ACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTAC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCTGTCCACACTTGTTaGGACCATGCAGACATATTT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPVHTC*DHADIF
Trigger: AAATATGTCTGCATGGTCCAAACAAGTGTGGACAGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGAATGGAGTCCTGGCTaGAATGACATACATGGTGAT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSEWSPG*NDIHGD
Trigger: ATCACCATGTATGTCATTCAAGCCAGGACTCCATTC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGAATGGAGTCCTGGCTaGAATGACATACATGGTGAT +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETEWSPG*NDIHGD
Trigger: ATCACCATGTATGTCATTCAAGCCAGGACTCCATTC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGAATGGAGTCCTGGCTaGAATGACATACATGGTGAT +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEEWSPG*NDIHGD
Trigger: ATCACCATGTATGTCATTCAAGCCAGGACTCCATTC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACCCTTCTCCTTTGTTGTaGAAGACACCTACTTTAACC +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHPSPLL*KTPTLT
Trigger: GGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGG...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGGGCCTTCTCCTTTGTaGTTGAAGACACCTACTTTA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSGPSPL*LKTPTL
Trigger: TAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGGGCCTTCTCCTTTGTaGTTGAAGACACCTACTTTA +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIGPSPL*LKTPTL
Trigger: TAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCAAAGGGCCTTCTCCTTaGTTGTTGAAGACACCTACT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSKGPSP*LLKTPT
Trigger: AGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGAAAGGGCCTTCTCCTTaGTTGTTGAAGACACCTACT +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKKGPSP*LLKTPT
Trigger: AGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTT...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCATCCAGGGCCTTCACTaGATCCCAATTCAGGATAAT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSIQGLH*IPIQDN
Trigger: ATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGAT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGACAGATGTGCTGCTTaGTCTGTTCCATCTGTACAA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSDRCAA*SVPSVQ
Trigger: TTGTACAGATGGAACAGACAAAGCAGCACATCTGTC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAGACAGATGTGCTGCTTaGTCTGTTCCATCTGTACAA +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEDRCAA*SVPSVQ
Trigger: TTGTACAGATGGAACAGACAAAGCAGCACATCTGTC...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCTCTCGCGTAGGCATTaGATATCTTTGGAATTCGAA +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQLSRRH*ISLEFE
Trigger: TTCGAATTCCAAAGATATCAAATGCCTACGCGAGAG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGATGTCTTCAGTGCATaGCAGAGTTTCCAAAGAAAC +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHDVFSA*QSFQRN
Trigger: GTTTCTTTGGAAACTCTGCAATGCACTGAAGACATC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATACAGTACATTGAGCTTTaGAGATTGCAGCCATTCCTG +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIQYIEL*RLQPFL
Trigger: CAGGAATGGCTGCAATCTCAAAAGCTCAATGTACTG...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATGGGAATATTTCTCCTaGTGGTCTCTGCAAGTTTAT +
Preference number: 5 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTWEYFS*WSLQVY
Trigger: ATAAACTTGCAGAGACCACAAGGAGAAATATTCCCA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATACAGGACTTGGTTCTaGAATAAAAATCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEYRTWF*NKNRAM
Trigger: CATGGCCCGATTTTTATTCAAGAACCAAGTCCTGTA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGTTTTATTGGGGTTATaGATCAACAAGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQVLLGL*INKLPS
Trigger: TGAAGGGAGCTTGTTGATCAATAACCCCAATAAAAC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACGTTTTATTGGGGTTATaGATCAACAAGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHVLLGL*INKLPS
Trigger: TGAAGGGAGCTTGTTGATCAATAACCCCAATAAAAC...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGGCATCTTGGGTTTTATaGGGGTTATTGATCAACAAG +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQASWVL*GLLINK
Trigger: CTTGTTGATCAATAACCCCAATAAAACCCAAGATGC...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGTCTCAAGAATTCCATTaGACTTGTGTCTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQSQEFH*TCVFWL
Trigger: AAGCCAGAAGACACAAGTCAAATGGAATTCTTGAGA...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCACACTAAGCTCTGCGTaGGAAAAGATAACTCCATGT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSTLSSA*EKITPC
Trigger: ACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACACTAAGCTCTGCGTaGGAAAAGATAACTCCATGT +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQETLSSA*EKITPC
Trigger: ACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAACACTAAGCTCTGCGTaGGAAAAGATAACTCCATGT +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETITLSSA*EKITPC
Trigger: ACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCACACTAAGCTCTGCGTaGGAAAAGATAACTCCATGT +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETTLSSA*EKITPC
Trigger: ACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGT...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp CTGAAACCATCTCAAGTTGGGTTGAACAACAAAATTCACAACGGCATGAAAACATTTTCAAGAGTGTTCTaGAAAAATCTGGACCTACAG +
Preference number: 5 (lower is better)
Translates to: LKPSQVGLNNKIHNGMKTFSRVF*KNLDLQ
Trigger: CTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAA...TGTTTTCATGCCGTTGTGAATTTTGTTGTTCAACCCAACTTGAGATGGTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCACTTCACCTCCCACTTaGACAAGAGTTACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSTSPPT*TRVTLF
Trigger: GAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGT...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGACTTCACCTCCCACTTaGACAAGAGTTACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKTSPPT*TRVTLF
Trigger: GAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGT...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCGTACCATTACCCTTGTaGGATCTTTCACTACCAAGT +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSVPLPL*DLSLPS
Trigger: ACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTAC...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCCTTCTCCTTTGTTGTaGAAGACACCTACTTTAACC +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSPSPLL*KTPTLT
Trigger: GGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACCTTCTCCTTTGTTGTaGAAGACACCTACTTTAACC +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEPSPLL*KTPTLT
Trigger: GGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATACCTTCTCCTTTGTTGTaGAAGACACCTACTTTAACC +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIPSPLL*KTPTLT
Trigger: GGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGG...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCTCTCGCGTAGGCATTaGATATCTTTGGAATTCGAA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSLSRRH*ISLEFE
Trigger: TTCGAATTCCAAAGATATCAAATGCCTACGCGAGAG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACTCTCGCGTAGGCATTaGATATCTTTGGAATTCGAA +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQELSRRH*ISLEFE
Trigger: TTCGAATTCCAAAGATATCAAATGCCTACGCGAGAG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGAATTGCATGATTGTGTaGCCCATAGCATTTTACAGC +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQNCMIV*PIAFYS
Trigger: GCTGTAAAATGCTATGGGCAACACAATCATGCAATT...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAATTGAGCTTTTGAGATaGCAGCCATTCCTGAAACCA +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIIELLR*QPFLKP
Trigger: TGGTTTCAGGAATGGCTGCAATCTCAAAAGCTCAAT...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp ATACTGTACATGTCAAGTGCATTAACCACTAGAAGAGTAGTTTGCATACAACAGCAACTAGGCTACCTATaGCAAAACAGAATCATCAAG +
Preference number: 5 (lower is better)
Translates to: ILYMSSALTTRRVVCIQQQLGYL*QNRIIK
Trigger: CTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTG...CTGTTGTATGCAAACTACTCTTCTAGTGGTTAATGCACTTGACATGTACAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCGCATCTTGGGTTTTATaGGGGTTATTGATCAACAAG +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETASWVL*GLLINK
Trigger: CTTGTTGATCAATAACCCCAATAAAACCCAAGATGC...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATAGCATCTTGGGTTTTATaGGGGTTATTGATCAACAAG +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIASWVL*GLLINK
Trigger: CTTGTTGATCAATAACCCCAATAAAACCCAAGATGC...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTCTCAAGAATTCCATTaGACTTGTGTCTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETSQEFH*TCVFWL
Trigger: AAGCCAGAAGACACAAGTCAAATGGAATTCTTGAGA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGTCTCAAGAATTCCATTaGACTTGTGTCTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKSQEFH*TCVFWL
Trigger: AAGCCAGAAGACACAAGTCAAATGGAATTCTTGAGA...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCCATCTGTACAAGACTTaGTATCCTTTTACTTCCGAC +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSHLYKT*YPFTSD
Trigger: GTCGGAAGTAAAAGGATACAAAGTCTTGTACAGATG...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCCATCTGTACAAGACTTaGTATCCTTTTACTTCCGAC +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETHLYKT*YPFTSD
Trigger: GTCGGAAGTAAAAGGATACAAAGTCTTGTACAGATG...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGAATTGCATGATTGTGTaGCCCATAGCATTTTACAGC +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKNCMIV*PIAFYS
Trigger: GCTGTAAAATGCTATGGGCAACACAATCATGCAATT...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAAATTGCATGATTGTGTaGCCCATAGCATTTTACAGC +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQENCMIV*PIAFYS
Trigger: GCTGTAAAATGCTATGGGCAACACAATCATGCAATT...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GTGAAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACTTGACTATAGTAACTTaGGGTCTATGTTACTACAGG +
Preference number: 5 (lower is better)
Translates to: VKRKSSCTMLNSGMGILHLTIVT*GLCYYR
Trigger: CCTGTAGTAACATAGACCCAAAGTTACTATAGTCAA...GTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAACAACTAGGCTACCTATaGCAAAACAGAATCATCAAG +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQEQLGYL*QNRIIK
Trigger: CTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTG...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAAGAAAATCTTCCTGTACAATGCTAAATTCAGGGATGGGAATATTGCACAAGCAACTAGGCTACCTATaGCAAAACAGAATCATCAAG +
Preference number: 5 (lower is better)
Translates to: KRKSSCTMLNSGMGILHKQLGYL*QNRIIK
Trigger: CTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTG...CTTGTGCAATATTCCCATCCCTGAATTTAGCATTGTACAGGAAGATTTTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTTGAATCCAATTAGGTaGAGCAAATCAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSLNPIR*SKSKPP
Trigger: TGGAGGCTTTGATTTGCTCAACCTAATTGGATTCAA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397459.6
CDS GCA 90 bp AAAGAAGGAAGGTGGTCTTCAGAAATCACAGTAGTTTCACTCAAATaGAAAAATCGTTTTTGTTTCCCTTGTAACATTCTTGTCTACATC +
Preference number: 5 (lower is better)
Translates to: KEGRWSSEITVVSLK*KNRFCFPCNILVYI
Trigger: GATGTAGACAAGAATGTTACAAGGGAAACAAAAACGATTTTTGCATTTGAGTGAAACTACTGTGATTTCTGAAGACCACCTTCCTTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484686.1
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTTTTCAAGAGTGTTCTaGAAAAATCTGGACCTACAG +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSFSRVF*KNLDLQ
Trigger: CTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp AAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCTTTTCAAGAGTGTTCTaGAAAAATCTGGACCTACAG +
Preference number: 5 (lower is better)
Translates to: KAYKATRLPIAKQNHQETFSRVF*KNLDLQ
Trigger: CTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAA...GGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAAACCATATTTTCAAGAGTGTTCTaGAAAAATCTGGACCTACAG +
Preference number: 5 (lower is better)
Translates to: AYKATRLPIAKQNHQETIFSRVF*KNLDLQ
Trigger: CTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAA...TATGGTTTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTCTGATTTAGTAACGTaGATGATTCTGAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSSDLVT*MILRFP
Trigger: TGGAAACCTCAGAATCATCAACGTTACTAAATCAGA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATCTGATTTAGTAACGTaGATGATTCTGAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQESDLVT*MILRFP
Trigger: TGGAAACCTCAGAATCATCAACGTTACTAAATCAGA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GGTAAAGCATATAAAGCAACTAGGCTACCTATTGCAAAACAGAATCATCAAGAATTGACTATAGTAACTTaGGGTCTATGTTACTACAGG +
Preference number: 5 (lower is better)
Translates to: GKAYKATRLPIAKQNHQELTIVT*GLCYYR
Trigger: CCTGTAGTAACATAGACCCAAAGTTACTATAGTCAA...TTCTTGATGATTCTGTTTTGCAATAGGTAGCCTAGTTGCTTTATATGCTTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS-3UTR CAA 90 bp GATGTACTTGAACAACAATATTACTTAGTACTGGGTGTCTTCAAAACAACTAGCTTGACTATAGTAACTTaGGGTCTATGTTACTACAGG +
Preference number: 5 (lower is better)
Translates to: DVLEQQYYLVLGVFKTTSLTIVT*GLCYYR
Trigger: CCTGTAGTAACATAGACCCAAAGTTACTATAGTCAA...GCTAGTTGTTTTGAAGACACCCAGTACTAAGTAATATTGTTGTTCAAGTACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
CDS CCA 72 bp GGGCGGCGGCGAAAGCTCCCTACTTGCAGCCAATCCTaGCGTCGAACCCCGGGCTCCGTCTGGCGCGGCGCT +
Preference number: 6 (lower is better)
Translates to: GRRRKLPTCSQS*RRTPGSVWRGA
Trigger: AGCGCCGCGCCAGACGGAGCCCGGGGTTCGACGCCAGGATTGGCTGCAAGTAGGGAGCTTTCGCCGCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422330.5
CDS CCA 72 bp TGGGGAAGCCAGGTACCTTCCCTAAGAGCAGGCACCTaGCCTGTCGCTCGCCGCCGCAGCCTCAGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: WGSQVPSLRAGT*PVARRRSLSAQ
Trigger: CTGAGCGCTGAGGCTGCGGCGGCGAGCGACAGGCCAGGTGCCTGCTCTTAGGGAAGGTACCTGGCTTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490876.1
CDS TCA 72 bp GGGGGCAGTAGCCCGAACCAGTCGGAGGAGCTGACTTaGAGGCTTCCCGCAGCATTCCGGGCTCTCGGTTCC +
Preference number: 6 (lower is better)
Translates to: GGSSPNQSEELT*RLPAAFRALGS
Trigger: GGAACCGAGAGCCCGGAATGCTGCGGGAAGCCTTCAAGTCAGCTCCTCCGACTGGTTCGGGCTACTGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS TCA 72 bp GGAGAGGGGGCAGTAGCCCGAACCAGTCGGAGGAGCTaGCTTGAAGGCTTCCCGCAGCATTCCGGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: GEGAVARTSRRS*LEGFPQHSGLS
Trigger: CGAGAGCCCGGAATGCTGCGGGAAGCCTTCAAGTCAGCTCCTCCGACTGGTTCGGGCTACTGCCCCCTCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS GCA 72 bp GGGACTAGAGATGCTGAACTGCTCTCCGCTGCGCGCTaGATGGCTCTCCGCCAGCATTCATCAAGGAGGACC +
Preference number: 6 (lower is better)
Translates to: GTRDAELLSAAR*MALRQHSSRRT
Trigger: GGTCCTCCTTGATGAATGCTGGCGGAGAGCCATGCAGCGCGCAGCGGAGAGCAGTTCAGCATCTCTAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS GCA 72 bp GGACCATATTCTCAGCTGGGACTAGAGATGCTGAACTaGTCTCCGCTGCGCGCTGCATGGCTCTCCGCCAGC +
Preference number: 6 (lower is better)
Translates to: GPYSQLGLEMLN*SPLRAAWLSAS
Trigger: GCTGGCGGAGAGCCATGCAGCGCGCAGCGGAGAGCAGTTCAGCATCTCTAGTCCCAGCTGAGAATATGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS CCA 72 bp CTAGAGATGCTGAACTGCTCTCCGCTGCGCGCTGCATaGCTCTCCGCCAGCATTCATCAAGGAGGACCCAGC +
Preference number: 6 (lower is better)
Translates to: LEMLNCSPLRAA*LSASIHQGGPS
Trigger: GCTGGGTCCTCCTTGATGAATGCTGGCGGAGAGCCATGCAGCGCGCAGCGGAGAGCAGTTCAGCATCTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS CCA 72 bp TCCCGCAGCATTCCGGGCTCTCGGTTCCTTGTTTTGTaGCTGCCTCGCAGCGCAACAAACTTATTTTCCGGC +
Preference number: 6 (lower is better)
Translates to: SRSIPGSRFLVL*LPRSATNLFSG
Trigger: GCCGGAAAATAAGTTTGTTGCGCTGCGAGGCAGCCACAAAACAAGGAACCGAGAGCCCGGAATGCTGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS CAA 90 bp GACTTGAAGGCTTCCCGCAGCATTCCGGGCTCTCGGTTCCTTGTTTaGTGGCTGCCTCGCAGCGCAACAAACTTATTTTCCGGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: DLKASRSIPGSRFLV*WLPRSATNLFSGSA
Trigger: TGCTGAGCCGGAAAATAAGTTTGTTGCGCTGCGAGGCAGCCACAAAACAAGGAACCGAGAGCCCGGAATGCTGCGGGAAGCCTTCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS GCA 72 bp GCAGCATTCCGGGCTCTCGGTTCCTTGTTTTGTGGCTaGCTCGCAGCGCAACAAACTTATTTTCCGGCTCAG +
Preference number: 6 (lower is better)
Translates to: AAFRALGSLFCG*LAAQQTYFPAQ
Trigger: CTGAGCCGGAAAATAAGTTTGTTGCGCTGCGAGGCAGCCACAAAACAAGGAACCGAGAGCCCGGAATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS CCA 72 bp TCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTTaGTCCACCAGGCTGGCCTTAGAGAGGAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SFPSAMATSRAS*STRLALERSRA
Trigger: GGCTCTGCTCCTCTCTAAGGCCAGCCTGGTGGACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS CAA 72 bp GCTTCCCGCAGCATTCCGGGCTCTCGGTTCCTTGTTTaGTGGCTGCCTCGCAGCGCAACAAACTTATTTTCC +
Preference number: 6 (lower is better)
Translates to: ASRSIPGSRFLV*WLPRSATNLFS
Trigger: GGAAAATAAGTTTGTTGCGCTGCGAGGCAGCCACAAAACAAGGAACCGAGAGCCCGGAATGCTGCGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427741.5
ENST00000490876.1
CDS CAA 90 bp CATGTTTGGCTCTTTTCCTTCTGCAATGGCAACGTCCAGAGCATCTaGGTCCACCAGGCTGGCCTTAGAGAGGAGCAGAGCCACTACCAA +
Preference number: 6 (lower is better)
Translates to: HVWLFSFCNGNVQSI*VHQAGLREEQSHYQ
Trigger: TTGGTAGTGGCTCTGCTCCTCTCTAAGGCCAGCCTGGTGGACCAAGATGCTCTGGACGTTGCCATTGCAGAAGGAAAAGAGCCAAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473845.1
CDS CAA 90 bp TCCAGGCGCAGGCTGCTTGACGTCTCCCTTTCTCTCTTCTATGTATaGTTCTGCTTGTCTTTAGCCTACCCCTTTACTTTGTGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: SRRRLLDVSLSLFYV*FCLSLAYPFTLCFP
Trigger: CGGGAAGCACAAAGTAAAGGGGTAGGCTAAAGACAAGCAGAACAATACATAGAAGAGAGAAAGGGAGACGTCAAGCAGCCTGCGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480113.1
CDS TCA 72 bp ATTTCAGCTCTCAGCAAGTCCCTGCTTCCACTACACTaGTCATCCACGCAGAACAGGCCCTTATGGATTGCT +
Preference number: 6 (lower is better)
Translates to: ISALSKSLLPLH*SSTQNRPLWIA
Trigger: AGCAATCCATAAGGGCCTGTTCTGCGTGGATGATCAGTGTAGTGGAAGCAGGGACTTGCTGAGAGCTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS TCA 72 bp TTTCCTAAGGAACAGCAGCTGGCAGAACAGATGATCTaGATCTCGGGTGCTACTCACGAGCTTCTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: FPKEQQLAEQMI*ISGATHELLLF
Trigger: GAACAGAAGAAGCTCGTGAGTAGCACCCGAGATTCAGATCATCTGTTCTGCCAGCTGCTGTTCCTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430505.6
CDS TCA 72 bp ACCAGAAGTCAGTCTGTGAACCTGCAAGGCACAAAATaGATGATTGCAGTACCAGCAGTTCCCATGGCAACC +
Preference number: 6 (lower is better)
Translates to: TRSQSVNLQGTK*MIAVPAVPMAT
Trigger: GGTTGCCATGGGAACTGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAGGTTCACAGACTGACTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434053.5
CDS TCA 72 bp AACGTAATGAGGATCTGCAGTCCAGAGCTTGCTCTTTaGTGGGGCAGACCCAGCTCTGAAATGGTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: NVMRICSPELAL*WGRPSSEMVGN
Trigger: ATTTCCAACCATTTCAGAGCTGGGTCTGCCCCATCAAAGAGCAAGCTCTGGACTGCAGATCCTCATTACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484686.1
CDS GCA 72 bp CAAATCAAACAGAGATTTCAGCTCTCAGCAAGTCCCTaGTTCCACTACACTGATCATCCACGCAGAACAGGC +
Preference number: 6 (lower is better)
Translates to: QIKQRFQLSASP*FHYTDHPRRTG
Trigger: GCCTGTTCTGCGTGGATGATCAGTGTAGTGGAAGCAGGGACTTGCTGAGAGCTGAAATCTCTGTTTGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS CAA 72 bp CGAGTTTGTCGCTGTGCACTGGTACGTTCCAGCATCTaGGGTTTTATTGGGGTTATTGATCAACAAGCTCCC +
Preference number: 6 (lower is better)
Translates to: RVCRCALVRSSI*GFIGVIDQQAP
Trigger: GGGAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCAGTGCACAGCGACAAACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000434053.5
ENST00000438282.6
CDS TCA 72 bp CAAAGCGGCGATTATCCTGATAGGAAGGGTATTCATTaGAGATCCAGGCATAACTCAGCTCTCCAGAATGGG +
Preference number: 6 (lower is better)
Translates to: QSGDYPDRKGIH*RSRHNSALQNG
Trigger: CCCATTCTGGAGAGCTGAGTTATGCCTGGATCTTCAATGAATACCCTTCCTATCAGGATAATCGCCGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000438282.6
CDS TCA 72 bp GTACAAGTGGACCTAATGAAGAAAACAACTCTTGATTaGAACCCGTTGCGTGTTCAGCTGGGCTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VQVDLMKKTTLD*NPLRVQLGFSW
Trigger: CCAGGAGAAGCCCAGCTGAACACGCAACGGGTTTCAATCAAGAGTTGTTTTCTTCATTAGGTCCACTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430505.6
CDS GCA 72 bp TCAGTCTGTGAACCTGCAAGGCACAAAATGAATGATTaGAGTACCAGCAGTTCCCATGGCAACCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: SVCEPARHKMND*STSSSHGNLIF
Trigger: GAAGATGAGGTTGCCATGGGAACTGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAGGTTCACAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434053.5
CDS CCA 72 bp GAGTTTGTCGCTGTGCACTGGTACGTTCCAGCATCTTaGGTTTTATTGGGGTTATTGATCAACAAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: EFVAVHWYVPAS*VLLGLLINKLP
Trigger: AGGGAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCAGTGCACAGCGACAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000434053.5
ENST00000438282.6
CDS CAA 72 bp TTTCTCAATATTAGTGGTGTAGGTGGCCCCAGGACCTaGTGGTTTGTCACGGTATTGGTAACCACACAGGTA +
Preference number: 6 (lower is better)
Translates to: FLNISGVGGPRT*WFVTVLVTTQV
Trigger: TACCTGTGTGGTTACCAATACCGTGACAAACCACAAGGTCCTGGGGCCACCTACACCACTAATATTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000438282.6
ENST00000473058.1
CDS CAA 90 bp TGTTCCAAACGAGTTTGTCGCTGTGCACTGGTACGTTCCAGCATCTaGGGTTTTATTGGGGTTATTGATCAACAAGCTCCCTTCAACAAC +
Preference number: 6 (lower is better)
Translates to: CSKRVCRCALVRSSI*GFIGVIDQQAPFNN
Trigger: GTTGTTGAAGGGAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCAGTGCACAGCGACAAACTCGTTTGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000434053.5
ENST00000438282.6
CDS TCA 72 bp ATGCAGTGTGGAATCATCTGCAAGGCACAAAATGAATaGTTGCAGTACCAGCAGTTCCCATGGCAACCTCAT +
Preference number: 6 (lower is better)
Translates to: MQCGIICKAQNE*LQYQQFPWQPH
Trigger: ATGAGGTTGCCATGGGAACTGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAGATGATTCCACACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000438282.6
ENST00000455083.5
CDS TCA 72 bp GGTACGTTCCAGCATCTTGGGTTTTATTGGGGTTATTaGTCAACAAGCTCCCTTCAACAACACTGTAGCGGA +
Preference number: 6 (lower is better)
Translates to: GTFQHLGFYWGY*STSSLQQHCSG
Trigger: TCCGCTACAGTGTTGTTGAAGGGAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000434053.5
ENST00000438282.6
CDS GCA 72 bp AGTGTGGAATCATCTGCAAGGCACAAAATGAATGATTaGAGTACCAGCAGTTCCCATGGCAACCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: SVESSARHKMND*STSSSHGNLIF
Trigger: GAAGATGAGGTTGCCATGGGAACTGCTGGTACTGCAATCATTCATTTTGTGCCTTGCAGATGATTCCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000438282.6
ENST00000455083.5
CDS CCA 72 bp CTAACAATTGTTCCAAACGAGTTTGTCGCTGTGCACTaGTACGTTCCAGCATCTTGGGTTTTATTGGGGTTA +
Preference number: 6 (lower is better)
Translates to: LTIVPNEFVAVH*YVPASWVLLGL
Trigger: TAACCCCAATAAAACCCAAGATGCTGGAACGTACCAGTGCACAGCGACAAACTCGTTTGGAACAATTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000434053.5
ENST00000438282.6
CDS CCA 72 bp TTTATTCCCTTAAGTAAAGTTGCGAAACAGTCCAAGTaGGCTCTGGCAGTGTTTCATCAGTTAGCGAAGTGG +
Preference number: 6 (lower is better)
Translates to: FIPLSKVAKQSK*ALAVFHQLAKW
Trigger: CCACTTCGCTAACTGATGAAACACTGCCAGAGCCCACTTGGACTGTTTCGCAACTTTACTTAAGGGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455083.5
CDS TCA 72 bp CAAAGCGGCGATTATCCTGATAGGAAGGGTATTCATTaGAGATCCAGGCATAACTCAGCTCTCTTTAAGTCA +
Preference number: 6 (lower is better)
Translates to: QSGDYPDRKGIH*RSRHNSALFKS
Trigger: TGACTTAAAGAGAGCTGAGTTATGCCTGGATCTTCAATGAATACCCTTCCTATCAGGATAATCGCCGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473058.1
CDS CCA 72 bp AAACAACTCTTGATTGAAACCCGTTGCGTGTTCAGCTaGGCTTCTCCTGGCCTGATTTCTATCATTATAAAC +
Preference number: 6 (lower is better)
Translates to: KQLLIETRCVFS*ASPGLISIIIN
Trigger: GTTTATAATGATAGAAATCAGGCCAGGAGAAGCCCAGCTGAACACGCAACGGGTTTCAATCAAGAGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430505.6
CDS CCA 72 bp CAGAAAAATTTGTGTCGCAGAACCACACCATTTGCCTaGATTAAATTCTCCATGCATACAACTTTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: QKNLCRRTTPFA*IKFSMHTTLPL
Trigger: GAGGGGCAAAGTTGTATGCATGGAGAATTTAATCCAGGCAAATGGTGTGGTTCTGCGACACAAATTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473173.1
CDS CAA 72 bp CTCAGAATCCAAAGGGAACATTACAGGACTTGGTTCTaGAATAAAAATCGGGCCATGCAGTGTGGAATCATC +
Preference number: 6 (lower is better)
Translates to: LRIQREHYRTWF*NKNRAMQCGII
Trigger: GATGATTCCACACTGCATGGCCCGATTTTTATTCAAGAACCAAGTCCTGTAATGTTCCCTTTGGATTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000422330.5
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000434053.5
ENST00000438282.6
ENST00000455083.5
ENST00000480113.1
CDS CAA 90 bp CCCAGTTACTGCTACAGAAAAATTTGTGTCGCAGAACCACACCATTaGCCTGGATTAAATTCTCCATGCATACAACTTTGCCCCTCAAAA +
Preference number: 6 (lower is better)
Translates to: PSYCYRKICVAEPHH*PGLNSPCIQLCPSK
Trigger: TTTTGAGGGGCAAAGTTGTATGCATGGAGAATTTAATCCAGGCAAATGGTGTGGTTCTGCGACACAAATTTTTCTGTAGCAGTAACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473173.1
CDS TCA 72 bp CCTTTTACTTCCGACTCATTATCCAGGGCCTTCACTTaGTCCCAATTCAGGATAATTTTGGAGTCTGATGAA +
Preference number: 6 (lower is better)
Translates to: PFTSDSLSRAFT*SQFRIILESDE
Trigger: TTCATCAGACTCCAAAATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGATAATGAGTCGGAAGTAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397459.6
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
ENST00000484686.1
CDS CAA 72 bp TCATTTAAAGCAGGTCCTATCTCCAGCAGTCATGAATaGTGGCTCTTCTCCCAGTTACTGCTACAGAAAAAT +
Preference number: 6 (lower is better)
Translates to: SFKAGPISSSHE*WLFSQLLLQKN
Trigger: ATTTTTCTGTAGCAGTAACTGGGAGAAGAGCCACAATTCATGACTGCTGGAGATAGGACCTGCTTTAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473173.1
CDS CAA 90 bp TTAATTCCTTCATTTAAAGCAGGTCCTATCTCCAGCAGTCATGAATaGTGGCTCTTCTCCCAGTTACTGCTACAGAAAAATTTGTGTCGC +
Preference number: 6 (lower is better)
Translates to: LIPSFKAGPISSSHE*WLFSQLLLQKNLCR
Trigger: GCGACACAAATTTTTCTGTAGCAGTAACTGGGAGAAGAGCCACAATTCATGACTGCTGGAGATAGGACCTGCTTTAAATGAAGGAATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473173.1
CDS TCA 72 bp AATTTTATTTCCTTAAAACTGACAAGGTTGGCTGGGTaGCTAAGGCAAAGCATAGAGGTGATCAAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: NFISLKLTRLAG*LRQSIEVIKAF
Trigger: GAAGGCTTTGATCACCTCTATGCTTTGCCTTAGTCACCCAGCCAACCTTGTCAGTTTTAAGGAAATAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438282.6
CDS CAA 72 bp CAGCTCTCTTTAAGTCAAGGGCTAAGCATTTATAGTTaGCTAATCAGGTGTCAGGCACTATGTAACATGTAT +
Preference number: 6 (lower is better)
Translates to: QLSLSQGLSIYS*LIRCQALCNMY
Trigger: ATACATGTTACATAGTGCCTGACACCTGATTAGCAAACTATAAATGCTTAGCCCTTGACTTAAAGAGAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473058.1
CDS TCA 72 bp GGTATTGGTAACCACACAGGTATAATTCCCAACATCTaGTTTTTCTACTTTGGCAATATACAGATTCCCAGT +
Preference number: 6 (lower is better)
Translates to: GIGNHTGIIPNI*FFYFGNIQIPS
Trigger: ACTGGGAATCTGTATATTGCCAAAGTAGAAAAATCAGATGTTGGGAATTATACCTGTGTGGTTACCAATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397461.5
ENST00000418658.6
ENST00000427331.5
ENST00000427741.5
ENST00000430505.6
ENST00000438282.6
ENST00000473058.1