RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184144

Ensembl transcript IDs: ENST00000331830.7, ENST00000481872.6, ENST00000525433.2, ENST00000530117.5, ENST00000530594.2, ENST00000532366.2, ENST00000636312.2, ENST00000636641.2, ENST00000636809.2, ENST00000638050.2, ENST00000638378.1, ENST00000638449.1, ENST00000638577.1, ENST00000638715.1, ENST00000638928.1, ENST00000638980.1, ENST00000639015.1, ENST00000639023.1, ENST00000639122.1, ENST00000639156.1, ENST00000639302.1, ENST00000639354.1, ENST00000639503.1, ENST00000639788.1, ENST00000639831.1, ENST00000639843.1, ENST00000639971.1, ENST00000640227.1, ENST00000640326.1, ENST00000640352.1, ENST00000640428.1, ENST00000640714.1

Found 3058 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGGGCATCGGCGCCAGGCACCCGGGCGGTCTGCCAGTGAGTGCTaGCCTGCCTGCGGAAGGACAGCAGGTAGCCGAAGCCGTCTCCGT +
Preference number: 1 (lower is better)
Translates to: TGHRRQAPGRSASEC*PACGRTAGSRSRLR
Trigger: ACGGAGACGGCTTCGGCTACCTGCTGTCCTTCCGCAGGCAGGGCAGCACTCACTGGCAGACCGCCCGGGTGCCTGGCGCCGATGCCCAGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR CCA 90 bp TGTTGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTaGCAGAAGGGCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCC +
Preference number: 1 (lower is better)
Translates to: CCQEVAAEGASWSWR*QKGWQAQCQPGCRP
Trigger: GGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR TCA 90 bp GTCCCCCGCGGGTCTCACAGCCGAAGCGGAGGATGGCCTCCCTGCTaGCAACGGTGCCCACTGGGTTGGAGGCCAGGCACTGGTAGACCC +
Preference number: 1 (lower is better)
Translates to: VPRGSHSRSGGWPPC*QRCPLGWRPGTGRP
Trigger: GGGTCTACCAGTGCCTGGCCTCCAACCCAGTGGGCACCGTTGTCAGCAGGGAGGCCATCCTCCGCTTCGGCTGTGAGACCCGCGGGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 90 bp CCCGTTCCGCAGCCAGCGCACTGTAGGCCGGGGCTTGCCGGCGGCTaGACAGCCCCAACGCAGGTTGGAGCCAATGTCAGCCTCTGTGTC +
Preference number: 1 (lower is better)
Translates to: PVPQPAHCRPGLAGG*TAPTQVGANVSLCV
Trigger: GACACAGAGGCTGACATTGGCTCCAACCTGCGTTGGGGCTGTGCAGCCGCCGGCAAGCCCCGGCCTACAGTGCGCTGGCTGCGGAACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 90 bp AGTACTGGGCATCGGCGCCAGGCACCCGGGCGGTCTGCCAGTGAGTaGTGCCCTGCCTGCGGAAGGACAGCAGGTAGCCGAAGCCGTCTC +
Preference number: 1 (lower is better)
Translates to: STGHRRQAPGRSASE*CPACGRTAGSRSRL
Trigger: GAGACGGCTTCGGCTACCTGCTGTCCTTCCGCAGGCAGGGCAGCACTCACTGGCAGACCGCCCGGGTGCCTGGCGCCGATGCCCAGTACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR CCA 90 bp GTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTaGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACGGTCACAT +
Preference number: 1 (lower is better)
Translates to: VAAEGASWSWRWQKG*QAQCQPGCRPSRSH
Trigger: ATGTGACCGTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR GCA 90 bp GGGAGAGCAGAGTCTGGGGCTGCAGGTCGGGGAGGCCGAGCTGACTaGAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTG +
Preference number: 1 (lower is better)
Translates to: GRAESGAAGRGGRAD*RQHWRGGRMIGHLL
Trigger: CAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGCCCCAGACTCTGCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR GCA 90 bp AAGCTGACGCTGGGGATCTGCAGGGTGGGCTCAGCTGTGGTCCACTaGGGGGACAGGGAGCCGTCCACTTTGCGCCACTTGATCCGGGGG +
Preference number: 1 (lower is better)
Translates to: KLTLGICRVGSAVVH*GDREPSTLRHLIRG
Trigger: CCCCCGGATCAAGTGGCGCAAAGTGGACGGCTCCCTGTCCCCGCAGTGGACCACAGCTGAGCCCACCCTGCAGATCCCCAGCGTCAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 90 bp TGCTGGGAGAGCAGAGTCTGGGGCTGCAGGTCGGGGAGGCCGAGCTaGCTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCT +
Preference number: 1 (lower is better)
Translates to: CWESRVWGCRSGRPS*LQAALERWAHDWPS
Trigger: AGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGCCCCAGACTCTGCTCTCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR GCA 90 bp GAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTaGTCGAGGGAGAAGGCGGGAGAGCTCTTGGTCCCAGGGCTTGCC +
Preference number: 1 (lower is better)
Translates to: EPLGSYRGQRQGPCC*SREKAGELLVPGLA
Trigger: GGCAAGCCCTGGGACCAAGAGCTCTCCCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR CCA 90 bp ACAGCCGAAGCGGAGGATGGCCTCCCTGCTGACAACGGTGCCCACTaGGTTGGAGGCCAGGCACTGGTAGACCCCGGCATCCTGTGCCTT +
Preference number: 1 (lower is better)
Translates to: TAEAEDGLPADNGAH*VGGQALVDPGILCL
Trigger: AAGGCACAGGATGCCGGGGTCTACCAGTGCCTGGCCTCCAACCCAGTGGGCACCGTTGTCAGCAGGGAGGCCATCCTCCGCTTCGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 90 bp GGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTGGTGT +
Preference number: 1 (lower is better)
Translates to: GASWSWRWQKGWQAQ*QPGCRPSRSHGTWC
Trigger: ACACCAAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR CCA 90 bp AAAGCCGAAGCGGAGGATGGCCTCCCTGCTGACAACGGTGCCCACTaGGTTGGAGGCCAGGCACTGGTAGACCCCGGCATCCTGTGCCTT +
Preference number: 1 (lower is better)
Translates to: KAEAEDGLPADNGAH*VGGQALVDPGILCL
Trigger: AAGGCACAGGATGCCGGGGTCTACCAGTGCCTGGCCTCCAACCCAGTGGGCACCGTTGTCAGCAGGGAGGCCATCCTCCGCTTCGGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532366.2
3UTR GCA 90 bp GGTGTTGGGATGCAGGCCGCTGACTCGGGCACTGGTGTCCAGCCCTaGTGTCCTCACTCGGTCCGCAGCTGCTTCTTTGTCCCCAGCTTT +
Preference number: 1 (lower is better)
Translates to: GVGMQAADSGTGVQP*CPHSVRSCFFVPSF
Trigger: AAAGCTGGGGACAAAGAAGCAGCTGCGGACCGAGTGAGGACAGCAGGGCTGGACACCAGTGCCCGAGTCAGCGGCCTGCATCCCAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR TCA 90 bp TGGAGAATTCCTGCAGAAAGCCGAAGCGGAGGATGGCCTCCCTGCTaGCAACGGTGCCCACTGGGTTGGAGGCCAGGCACTGGTAGACCC +
Preference number: 1 (lower is better)
Translates to: WRIPAESRSGGWPPC*QRCPLGWRPGTGRP
Trigger: GGGTCTACCAGTGCCTGGCCTCCAACCCAGTGGGCACCGTTGTCAGCAGGGAGGCCATCCTCCGCTTCGGCTTTCTGCAGGAATTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532366.2
3UTR TCA 90 bp TGGAGTTCTCCGCCTCACACTCGTAGGTGCCCTCATCCTCAAAGCTaGCGCTGGGGATCTGCAGGGTGGGCTCAGCTGTGGTCCACTGCG +
Preference number: 1 (lower is better)
Translates to: WSSPPHTRRCPHPQS*RWGSAGWAQLWSTA
Trigger: CGCAGTGGACCACAGCTGAGCCCACCCTGCAGATCCCCAGCGTCAGCTTTGAGGATGAGGGCACCTACGAGTGTGAGGCGGAGAACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 90 bp GAAGCACTCCAGGGTGACCTGCTGCCCCACCAGTGCATAGGTCTCTaGTGGGAACCGGGCCTTGATGCTGGGTGCAAAGAGCCGGGTATC +
Preference number: 1 (lower is better)
Translates to: EALQGDLLPHQCIGL*WEPGLDAGCKEPGI
Trigger: GATACCCGGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCAGCAGAGACCTATGCACTGGTGGGGCAGCAGGTCACCCTGGAGTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 90 bp TCTCCGGGGAAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTaGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACAT +
Preference number: 1 (lower is better)
Translates to: SPGKCKQSKAVWERI*PGGPRYTWEQAGPH
Trigger: ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTTCCCCGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR CCA 90 bp GATCAGAGCTCCAGGGAGCCTATGAGGATCAGCATCGCCACGGAGTaGGAAATGACGGTGCCAGGGTGTGGTGCTGGGCGGACTGCCATG +
Preference number: 1 (lower is better)
Translates to: DQSSREPMRISIATE*EMTVPGCGAGRTAM
Trigger: CATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTCATTTCCCACTCCGTGGCGATGCTGATCCTCATAGGCTCCCTGGAGCTCTGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 90 bp GCACTCCAGGGTGACCTGCTGCCCCACCAGTGCATAGGTCTCTGCTaGGAACCGGGCCTTGATGCTGGGTGCAAAGAGCCGGGTATCTTC +
Preference number: 1 (lower is better)
Translates to: ALQGDLLPHQCIGLC*EPGLDAGCKEPGIF
Trigger: GAAGATACCCGGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCAGCAGAGACCTATGCACTGGTGGGGCAGCAGGTCACCCTGGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 90 bp TCTCTGCCACACACTGGTACATGCCCGAGTCTTCCAGGCTCAGCTTaGAGAACCGCAGGTCCCCAGCCAACACCTCCACCCGGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: SLPHTGTCPSLPGSA*RTAGPQPTPPPGSG
Trigger: CCCAGAACCGGGTGGAGGTGTTGGCTGGGGACCTGCGGTTCTCCAAGCTGAGCCTGGAAGACTCGGGCATGTACCAGTGTGTGGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 90 bp TTAGCGATGGGGCTGTGGTTGTCGAAGCCACGGCTCCAGCTGAGCTaGATGGTGGTGTCGCCAATGTCCCTCACCACCACACCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: LAMGLWLSKPRLQLS*MVVSPMSLTTTPPG
Trigger: CCCAGGAGGTGTGGTGGTGAGGGACATTGGCGACACCACCATCCAGCTCAGCTGGAGCCGTGGCTTCGACAACCACAGCCCCATCGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR GCA 90 bp GATCAGCATCGCCACGGAGTGGGAAATGACGGTGCCAGGGTGTGGTaGTGGGCGGACTGCCATGTTCTCCACCATCATGCTTGTGCCTCC +
Preference number: 1 (lower is better)
Translates to: DQHRHGVGNDGARVW*WADCHVLHHHACAS
Trigger: GGAGGCACAAGCATGATGGTGGAGAACATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTCATTTCCCACTCCGTGGCGATGCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR GCA 90 bp GTTCCCAAAGGCGAAGCACTCCAGGGTGACCTGCTGCCCCACCAGTaGATAGGTCTCTGCTGGGAACCGGGCCTTGATGCTGGGTGCAAA +
Preference number: 1 (lower is better)
Translates to: VPKGEALQGDLLPHQ*IGLCWEPGLDAGCK
Trigger: TTTGCACCCAGCATCAAGGCCCGGTTCCCAGCAGAGACCTATGCACTGGTGGGGCAGCAGGTCACCCTGGAGTGCTTCGCCTTTGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 90 bp TGCCAGGGTGTGGTGCTGGGCGGACTGCCATGTTCTCCACCATCATaGTTGTGCCTGAAACCAGCACAAGCTGAGTCAGCTGGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: CQGVVLGGLPCSPPS*LCLKPAQAESAGPG
Trigger: CCCAGGCCCAGCTGACTCAGCTTGTGCTGGTTTCAGGCACAAGCATGATGGTGGAGAACATGGCAGTCCGCCCAGCACCACACCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638577.1
3UTR CCA 90 bp GTCCCGCTGCCCCCTGTGAAGGGCCACCTGTCGGAGCATGGGCTTTaGGGTTTCCTAGTTGTGCTGCTGCTCTTGCCTAGGGAATCTGCT +
Preference number: 1 (lower is better)
Translates to: VPLPPVKGHLSEHGL*GFLVVLLLLPRESA
Trigger: AGCAGATTCCCTAGGCAAGAGCAGCAGCACAACTAGGAAACCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR CCA 90 bp CTAGCCATTTTGGGCTCTTGCCCAGAGTACAGGCTGGCTGGCCCTTaGGGCTGCCCTAAAGAGGCAGCATACGCTGGGATGAGCACTGGG +
Preference number: 1 (lower is better)
Translates to: LAILGSCPEYRLAGP*GCPKEAAYAGMSTG
Trigger: CCCAGTGCTCATCCCAGCGTATGCTGCCTCTTTAGGGCAGCCCCAAGGGCCAGCCAGCCTGTACTCTGGGCAAGAGCCCAAAATGGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 90 bp GAGGATCAGCATCGCCACGGAGTGGGAAATGACGGTGCCAGGGTGTaGTGCTGGGCGGACTGCCATGTTCTCCACCATCATGCTTGTGCC +
Preference number: 1 (lower is better)
Translates to: EDQHRHGVGNDGARV*CWADCHVLHHHACA
Trigger: GGCACAAGCATGATGGTGGAGAACATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTCATTTCCCACTCCGTGGCGATGCTGATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 90 bp AGCTTTCACTGGGTCTCGCTCCTCCTTGGAGAATTCCTGCAGAACTaGAGGCAGAGACCAGGGGCTCAGGCACTGTCCTCCTGGCCTGCG +
Preference number: 1 (lower is better)
Translates to: SFHWVSLLLGEFLQN*RQRPGAQALSSWPA
Trigger: CGCAGGCCAGGAGGACAGTGCCTGAGCCCCTGGTCTCTGCCTCCAGTTCTGCAGGAATTCTCCAAGGAGGAGCGAGACCCAGTGAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 90 bp GTCAGGTTGGCAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTaGCTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAAGGGCCC +
Preference number: 1 (lower is better)
Translates to: VRLAVLAERASSPGL*LSQTKAGAPFHQGP
Trigger: GGGCCCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTGCCAACCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR TCA 90 bp GGTGGGAGACCCCACCAAGACAAGCCCTTTAGTCACCCAGCCACCTaGAGTGGCGCTGTCAATCGGGATGACAGGGTCAGGTTGGCAGTG +
Preference number: 1 (lower is better)
Translates to: GGRPHQDKPFSHPAT*SGAVNRDDRVRLAV
Trigger: CACTGCCAACCTGACCCTGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR GCA 90 bp TTGGTCCGAACCTGCTTCCACTTCCCTGCAGGTGGAGTGCGAGCTTaGAGGGTGTACTTAGCGATGGGGCTGTGGTTGTCGAAGCCACGG +
Preference number: 1 (lower is better)
Translates to: LVRTCFHFPAGGVRA*RVYLAMGLWLSKPR
Trigger: CCGTGGCTTCGACAACCACAGCCCCATCGCTAAGTACACCCTGCAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAGGTTCGGACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR GCA 90 bp GACCCGGAACTCATAGTCCATCCAGGGGGTGAGGCCCAGCACCTGTaGAGTCTCGGCATTGCCCTCGATGTTTGCAGGATTGGTCCGAAC +
Preference number: 1 (lower is better)
Translates to: DPELIVHPGGEAQHL*SLGIALDVCRIGPN
Trigger: GTTCGGACCAATCCTGCAAACATCGAGGGCAATGCCGAGACTGCACAGGTGCTGGGCCTCACCCCCTGGATGGACTATGAGTTCCGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR GCA 90 bp GGTGTGGTGCTGGGCGGACTGCCATGTTCTCCACCATCATGCTTGTaGCTGAAACCAGCACAAGCTGAGTCAGCTGGGCCTGGGACTACC +
Preference number: 1 (lower is better)
Translates to: GVVLGGLPCSPPSCL*LKPAQAESAGPGTT
Trigger: GGTAGTCCCAGGCCCAGCTGACTCAGCTTGTGCTGGTTTCAGGCACAAGCATGATGGTGGAGAACATGGCAGTCCGCCCAGCACCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638577.1
3UTR CCA 90 bp AAGGCCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTaGGAGCAGGCAGGGCCACATTTATCCTCTGCCCTTCCCAGAAAC +
Preference number: 1 (lower is better)
Translates to: KAVWERIWPGGPRYT*EQAGPHLSSALPRN
Trigger: GTTTCTGGGAAGGGCAGAGGATAAATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR CCA 90 bp ACCTGCTCCTCCGTGGACTCCTCTGGGAATAGCACACTGAGGGGCTaGTCTTCAAAGACAGGCCCGAAGGTGGTTTGGGATCCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: TCSSVDSSGNSTLRG*SSKTGPKVVWDPRA
Trigger: AGCCCTGGGATCCCAAACCACCTTCGGGCCTGTCTTTGAAGACCAGCCCCTCAGTGTGCTATTCCCAGAGGAGTCCACGGAGGAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR TCA 90 bp TTGGTTCGGGCAATGTACAGGTTCCCTGTGGTCTGGGACACGAAGTaGCGCCCGTCCGTCGGGATGAAGTTGGGGAACTCGTTGAGGAGC +
Preference number: 1 (lower is better)
Translates to: LVRAMYRFPVVWDTK*RPSVGMKLGNSLRS
Trigger: GCTCCTCAACGAGTTCCCCAACTTCATCCCGACGGACGGGCGTCACTTCGTGTCCCAGACCACAGGGAACCTGTACATTGCCCGAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 90 bp GCCATGTTCTCCACCATCATGCTTGTGCCTGAAACCAGCACAAGCTaGGTCAGCTGGGCCTGGGACTACCCTAGCCCCACCCTTGTGGCA +
Preference number: 1 (lower is better)
Translates to: AMFSTIMLVPETSTS*VSWAWDYPSPTLVA
Trigger: TGCCACAAGGGTGGGGCTAGGGTAGTCCCAGGCCCAGCTGACTCAGCTTGTGCTGGTTTCAGGCACAAGCATGATGGTGGAGAACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638577.1
3UTR GCA 90 bp CCAGAGAGCCAGGGCAAAGGGCTCTGTAAGGGGAGCCCAAATGTATaGAGAAGAGAGGACACTTGTCTCCCTAGGCCCTGGAGAGGTGCC +
Preference number: 1 (lower is better)
Translates to: PESQGKGLCKGSPNV*RREDTCLPRPWRGA
Trigger: GGCACCTCTCCAGGGCCTAGGGAGACAAGTGTCCTCTCTTCTGCATACATTTGGGCTCCCCTTACAGAGCCCTTTGCCCTGGCTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 90 bp GCCCTCGATGTTTGCAGGATTGGTCCGAACCTGCTTCCACTTCCCTaGAGGTGGAGTGCGAGCTTGCAGGGTGTACTTAGCGATGGGGCT +
Preference number: 1 (lower is better)
Translates to: ALDVCRIGPNLLPLP*RWSASLQGVLSDGA
Trigger: AGCCCCATCGCTAAGTACACCCTGCAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAGGTTCGGACCAATCCTGCAAACATCGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR CCA 90 bp GTGAGCCTCTCTAAGCTGTGCAGGCCCTGGATGGGACGGGTAAGTTaGAGGAGTCTTGGGGCCGAGGCAAGATGTATCCCATCTAAGGGC +
Preference number: 1 (lower is better)
Translates to: VSLSKLCRPWMGRVS*RSLGAEARCIPSKG
Trigger: GCCCTTAGATGGGATACATCTTGCCTCGGCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTTAGAGAGGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 90 bp CCTAGCATTTGCCAAGCTGTGAGCCTCTCTAAGCTGTGCAGGCCCTaGATGGGACGGGTAAGTTGGAGGAGTCTTGGGGCCGAGGCAAGA +
Preference number: 1 (lower is better)
Translates to: PSICQAVSLSKLCRP*MGRVSWRSLGAEAR
Trigger: TCTTGCCTCGGCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTTAGAGAGGCTCACAGCTTGGCAAATGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 90 bp AGCACACTGAGGGGCTGGTCTTCAAAGACAGGCCCGAAGGTGGTTTaGGATCCCAGGGCTGAACTCCAAGCTGCAGGTGATGACACCACC +
Preference number: 1 (lower is better)
Translates to: STLRGWSSKTGPKVV*DPRAELQAAGDDTT
Trigger: GGTGGTGTCATCACCTGCAGCTTGGAGTTCAGCCCTGGGATCCCAAACCACCTTCGGGCCTGTCTTTGAAGACCAGCCCCTCAGTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 90 bp TCACGATGTGGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTaGTCCGAATTTGTACCAGGGCATGGCCAATGTCTTCAGGCACTG +
Preference number: 1 (lower is better)
Translates to: SRCGLLQGSHPLRAL*SEFVPGHGQCLQAL
Trigger: CAGTGCCTGAAGACATTGGCCATGCCCTGGTACAAATTCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCACATCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 90 bp AGGGTCCAGGTGAAGGTGAGGTCCATGGTGGGGTCGTGGGAGGCATaGCACTGTAGGGTCAGGTTGTCACCCAAGTTGATGTCGGCACTT +
Preference number: 1 (lower is better)
Translates to: RVQVKVRSMVGSWEA*HCRVRLSPKLMSAL
Trigger: AAGTGCCGACATCAACTTGGGTGACAACCTGACCCTACAGTGCCATGCCTCCCACGACCCCACCATGGACCTCACCTTCACCTGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 90 bp TCGGAAAGGGACCACAGGGTCCCACTTAATGCTAAGACTAGAGCTTaGGAAAGTCCAGGAGATGTTGCCAGGAGGTCGCCGCGGAGGGGG +
Preference number: 1 (lower is better)
Translates to: SERDHRVPLNAKTRA*ESPGDVARRSPRRG
Trigger: CCCCCTCCGCGGCGACCTCCTGGCAACATCTCCTGGACTTTCTCAAGCTCTAGTCTTAGCATTAAGTGGGACCCTGTGGTCCCTTTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR GCA 90 bp CTCCACCATCATGCTTGTGCCTCCATTCCTCACGATGTGGACTTCTaGAGGGATCCCATCCCCTCCGGGCCCTGTGGTCCGAATTTGTAC +
Preference number: 1 (lower is better)
Translates to: LHHHACASIPHDVDF*RDPIPSGPCGPNLY
Trigger: GTACAAATTCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCACATCGTGAGGAATGGAGGCACAAGCATGATGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR GCA 90 bp CACCTCCTGGGGGACCTGGCGGACAGAGGCTGTCACATGGAGAGGTaGATAGATCTCCCAGCACTAGGCTTTGAAAACTTCAGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: HLLGDLADRGCHMER*IDLPALGFENFRAQ
Trigger: CTGAGCCCTGAAGTTTTCAAAGCCTAGTGCTGGGAGATCTATGCACCTCTCCATGTGACAGCCTCTGTCCGCCAGGTCCCCCAGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR CCA 90 bp CTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTaGCGGAGTCCGTATAGGGTCCCAGAGGGCCATCTCTCCTACAAA +
Preference number: 1 (lower is better)
Translates to: LFMSGVPAGPRTALK*RSPYRVPEGHLSYK
Trigger: TTTGTAGGAGAGATGGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640326.1
3UTR TCA 90 bp GGCGGGAGAGCTCTTGGTCCCAGGGCTTGCCCTTCTTCCTTAGACTaGAGGATGGTGAGGTGTGCACTTCGCTCCAGTTCTTCAACCTGT +
Preference number: 1 (lower is better)
Translates to: GGRALGPRACPSSLD*RMVRCALRSSSSTC
Trigger: ACAGGTTGAAGAACTGGAGCGAAGTGCACACCTCACCATCCTTCAGTCTAAGGAAGAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR TCA 90 bp GAAGTCCATGTGGCTGGTGGCCAAACAGGAGTAGTTGCCCAGGTCTaGGGCATTGGTTCGGGCAATGTACAGGTTCCCTGTGGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: EVHVAGGQTGVVAQV*GIGSGNVQVPCGLG
Trigger: TCCCAGACCACAGGGAACCTGTACATTGCCCGAACCAATGCCTCAGACCTGGGCAACTACTCCTGTTTGGCCACCAGCCACATGGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 90 bp GATAACCTGACCTTGCTGGGCCCTGAGACTCTGTCTGGAGAGAGCTaGCTTCCCCCTGAGGCTGGGTGTACATCTGGACTGTTAGAGCAA +
Preference number: 1 (lower is better)
Translates to: DNLTLLGPETLSGES*LPPEAGCTSGLLEQ
Trigger: TTGCTCTAACAGTCCAGATGTACACCCAGCCTCAGGGGGAAGGCAGCTCTCTCCAGACAGAGTCTCAGGGCCCAGCAAGGTCAGGTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 90 bp GATCTGTGGGGTGTGAGGTGCATGAGACGTCGCCAGCCACAAACATaGAGAGAGGATGTGTGTCCCTGGAGCCTAATACCCTTACTGGGG +
Preference number: 1 (lower is better)
Translates to: DLWGVRCMRRRQPQT*REDVCPWSLIPLLG
Trigger: CCCCAGTAAGGGTATTAGGCTCCAGGGACACACATCCTCTCTGCATGTTTGTGGCTGGCGACGTCTCATGCACCTCACACCCCACAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 90 bp GAAGTGGCGCTGTCAATCGGGATGACAGGGTCAGGTTGGCAGTGTTaGCTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCA +
Preference number: 1 (lower is better)
Translates to: EVALSIGMTGSGWQC*LRGHRHLGCDYLRP
Trigger: TGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTGCCAACCTGACCCTGTCATCCCGATTGACAGCGCCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR CCA 90 bp ATGAGACGTCGCCAGCCACAAACATGCAGAGAGGATGTGTGTCCCTaGAGCCTAATACCCTTACTGGGGCAGTGTGGACCAACGAGGCCT +
Preference number: 1 (lower is better)
Translates to: MRRRQPQTCREDVCP*SLIPLLGQCGPTRP
Trigger: AGGCCTCGTTGGTCCACACTGCCCCAGTAAGGGTATTAGGCTCCAGGGACACACATCCTCTCTGCATGTTTGTGGCTGGCGACGTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 90 bp ATCCCATCCCCTCCGGGCCCTGTGGTCCGAATTTGTACCAGGGCATaGCCAATGTCTTCAGGCACTGGGATTTCTATCCAGTTCTTGCCG +
Preference number: 1 (lower is better)
Translates to: IPSPPGPVVRICTRA*PMSSGTGISIQFLP
Trigger: CGGCAAGAACTGGATAGAAATCCCAGTGCCTGAAGACATTGGCCATGCCCTGGTACAAATTCGGACCACAGGGCCCGGAGGGGATGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 90 bp TGTGGCTGGTGGCCAAACAGGAGTAGTTGCCCAGGTCTGAGGCATTaGTTCGGGCAATGTACAGGTTCCCTGTGGTCTGGGACACGAAGT +
Preference number: 1 (lower is better)
Translates to: CGWWPNRSSCPGLRH*FGQCTGSLWSGTRS
Trigger: ACTTCGTGTCCCAGACCACAGGGAACCTGTACATTGCCCGAACCAATGCCTCAGACCTGGGCAACTACTCCTGTTTGGCCACCAGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 90 bp GATGTTTGCAGGATTGGTCCGAACCTGCTTCCACTTCCCTGCAGGTaGAGTGCGAGCTTGCAGGGTGTACTTAGCGATGGGGCTGTGGTT +
Preference number: 1 (lower is better)
Translates to: DVCRIGPNLLPLPCR*SASLQGVLSDGAVV
Trigger: AACCACAGCCCCATCGCTAAGTACACCCTGCAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAGGTTCGGACCAATCCTGCAAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR TCA 90 bp GGAAGACTCGAGTTCTTAACCCAGCCCCATCTCTTCTGGGCTGTGTaGCCTTGGGAATCCCAGACCCTCTCTGGACCACCTCCATTTCCT +
Preference number: 1 (lower is better)
Translates to: GRLEFLTQPHLFWAV*PWESQTLSGPPPFP
Trigger: AGGAAATGGAGGTGGTCCAGAGAGGGTCTGGGATTCCCAAGGTCACACAGCCCAGAAGAGATGGGGCTGGGTTAAGAACTCGAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR TCA 90 bp CTAGGCCAAGTTTGGACTCCCTGTCAGGGAGAATGGTCGTATAGCTaGGCCCCTAGCACCCTTGCTTGTAAGGGTTGGGAAGAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: LGQVWTPCQGEWSYS*APSTLACKGWEEVR
Trigger: CCTCACCTCTTCCCAACCCTTACAAGCAAGGGTGCTAGGGGCTCAGCTATACGACCATTCTCCCTGACAGGGAGTCCAAACTTGGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 90 bp TCTTGGTGGAGAAGTCCATGTGGCTGGTGGCCAAACAGGAGTAGTTaGCCAGGTCTGAGGCATTGGTTCGGGCAATGTACAGGTTCCCTG +
Preference number: 1 (lower is better)
Translates to: SWWRSPCGWWPNRSS*PGLRHWFGQCTGSL
Trigger: CAGGGAACCTGTACATTGCCCGAACCAATGCCTCAGACCTGGGCAACTACTCCTGTTTGGCCACCAGCCACATGGACTTCTCCACCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 90 bp AGCATACGCTGGGATGAGCACTGGGCTGTAACCAGAATTCCTAGATaGGCCCCCTTAATGGCTTCCCATAAGGTGCAGGGCCACAGAAGG +
Preference number: 1 (lower is better)
Translates to: SIRWDEHWAVTRIPR*APLMASHKVQGHRR
Trigger: CCTTCTGTGGCCCTGCACCTTATGGGAAGCCATTAAGGGGGCTCATCTAGGAATTCTGGTTACAGCCCAGTGCTCATCCCAGCGTATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 90 bp AGCCCAAATGTATGCAGAAGAGAGGACACTTGTCTCCCTAGGCCCTaGAGAGGTGCCTACAGTTGGTTCCTTTTCCTAGTCCCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: SPNVCRREDTCLPRP*RGAYSWFLFLVPRV
Trigger: CACCCTGGGGACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAGACAAGTGTCCTCTCTTCTGCATACATTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 90 bp GGCCAATGTCTTCAGGCACTGGGATTTCTATCCAGTTCTTGCCGGTaGGGTGGAGCGTGGGAGTCAGGTGTAAGTCATTCTGGTACAGCA +
Preference number: 1 (lower is better)
Translates to: GQCLQALGFLSSSCR*GGAWESGVSHSGTA
Trigger: TGCTGTACCAGAATGACTTACACCTGACTCCCACGCTCCACCTCACCGGCAAGAACTGGATAGAAATCCCAGTGCCTGAAGACATTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 90 bp CATGGCCTTGCCACTCCCTGGCACCATTTGTATCATTTGTTGCCCTaGATGAAAGCAGATAACCTGACCTTGCTGGGCCCTGAGACTCTG +
Preference number: 1 (lower is better)
Translates to: HGLATPWHHLYHLLP*MKADNLTLLGPETL
Trigger: CAGAGTCTCAGGGCCCAGCAAGGTCAGGTTATCTGCTTTCATTCAGGGCAACAAATGATACAAATGGTGCCAGGGAGTGGCAAGGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 90 bp CTTTCAAGGGACCCTTACAGAAGAACTGATCTGTGGGGTGTGAGGTaGATGAGACGTCGCCAGCCACAAACATGCAGAGAGGATGTGTGT +
Preference number: 1 (lower is better)
Translates to: LSRDPYRRTDLWGVR*MRRRQPQTCREDVC
Trigger: ACACACATCCTCTCTGCATGTTTGTGGCTGGCGACGTCTCATGCACCTCACACCCCACAGATCAGTTCTTCTGTAAGGGTCCCTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR TCA 90 bp AGGATACTGTGTCTCCCACCAATGAGCCAGTTGGCAGTCCCATTCTaGGACCAGGCAGAGAAAAGATTCCTCTGTAGCTGGGGAAGAGAT +
Preference number: 1 (lower is better)
Translates to: RILCLPPMSQLAVPF*DQAEKRFLCSWGRD
Trigger: ATCTCTTCCCCAGCTACAGAGGAATCTTTTCTCTGCCTGGTCTCAGAATGGGACTGCCAACTGGCTCATTGGTGGGAGACACAGTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 90 bp CCTCTTCTTCAAGGGGCTTGCGGTCCAAGGAGGGAGACAGGAAATTaGCAGTGCAAGGTAGCAAATGCCATAAAGTTCAAGATGCTGGGG +
Preference number: 1 (lower is better)
Translates to: PLLQGACGPRRETGN*QCKVANAIKFKMLG
Trigger: CCCCAGCATCTTGAACTTTATGGCATTTGCTACCTTGCACTGTCAATTTCCTGTCTCCCTCCTTGGACCGCAAGCCCCTTGAAGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 90 bp ACTTCCTGGGCTGAACACTTTGATTCTAAGAGTCTCATCTCTGGATaGACACTTGGACCATCTCCTGCCCCTCCAGTCACAGCTTCACCT +
Preference number: 1 (lower is better)
Translates to: TSWAEHFDSKSLISG*TLGPSPAPPVTASP
Trigger: AGGTGAAGCTGTGACTGGAGGGGCAGGAGATGGTCCAAGTGTCCATCCAGAGATGAGACTCTTAGAATCAAAGTGTTCAGCCCAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 90 bp CCCATAAGGTGCAGGGCCACAGAAGGTGGGATCTCCAAGACTTCCTaGGCTGAACACTTTGATTCTAAGAGTCTCATCTCTGGATGGACA +
Preference number: 1 (lower is better)
Translates to: PIRCRATEGGISKTS*AEHFDSKSLISGWT
Trigger: TGTCCATCCAGAGATGAGACTCTTAGAATCAAAGTGTTCAGCCCAGGAAGTCTTGGAGATCCCACCTTCTGTGGCCCTGCACCTTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 90 bp TTGCATCTCGCACAGATAGGATTCCAGTGCTGTTGGCTTTGCCCATaGAGTTCTCAGCAAAGCAGGTGTATTTGCCTTCATCTGACCGGC +
Preference number: 1 (lower is better)
Translates to: LHLAQIGFQCCWLCP*SSQQSRCICLHLTG
Trigger: GCCGGTCAGATGAAGGCAAATACACCTGCTTTGCTGAGAACTTCATGGGCAAAGCCAACAGCACTGGAATCCTATCTGTGCGAGATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 90 bp AGGCTGTCACATGGAGAGGTGCATAGATCTCCCAGCACTAGGCTTTaGAAACTTCAGGGCTCAGTAAAGCACTCCTGTCTTGGGATGTGT +
Preference number: 1 (lower is better)
Translates to: RLSHGEVHRSPSTRL*KLQGSVKHSCLGMC
Trigger: ACACATCCCAAGACAGGAGTGCTTTACTGAGCCCTGAAGTTTTCAAAGCCTAGTGCTGGGAGATCTATGCACCTCTCCATGTGACAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR GCA 90 bp CTACTGACTAATCACCTTCTTAGCCAGGCCATAGCCATTCAGCAGTaGCTCCTTCCTCTGGGTAGACAAACAGCCTTGAACAGAAAGGTG +
Preference number: 1 (lower is better)
Translates to: LLTNHLLSQAIAIQQ*LLPLGRQTALNRKV
Trigger: CACCTTTCTGTTCAAGGCTGTTTGTCTACCCAGAGGAAGGAGGCACTGCTGAATGGCTATGGCCTGGCTAAGAAGGTGATTAGTCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR GCA 90 bp TTCTTGGATAAAAGCCTCTGGAGTGAAGAACAGGACAAGGAGGTATaGTTTAGCCTGATGATAACACCCACAGCTCGTGCCAGCTTCCCC +
Preference number: 1 (lower is better)
Translates to: FLDKSLWSEEQDKEV*FSLMITPTARASFP
Trigger: GGGGAAGCTGGCACGAGCTGTGGGTGTTATCATCAGGCTAAAGCATACCTCCTTGTCCTGTTCTTCACTCCAGAGGCTTTTATCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331830.7
3UTR GCA 90 bp CGGTCCAAGGAGGGAGACAGGAAATTGACAGTGCAAGGTAGCAAATaGCATAAAGTTCAAGATGCTGGGGCCTCAGAATGGAAGCAGTTC +
Preference number: 1 (lower is better)
Translates to: RSKEGDRKLTVQGSK*HKVQDAGASEWKQF
Trigger: GAACTGCTTCCATTCTGAGGCCCCAGCATCTTGAACTTTATGGCATTTGCTACCTTGCACTGTCAATTTCCTGTCTCCCTCCTTGGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 90 bp ATGTCTTCAGGCACTGGGATTTCTATCCAGTTCTTGCCGGTGAGGTaGAGCGTGGGAGTCAGGTGTAAGTCATTCTGGTACAGCATCTTA +
Preference number: 1 (lower is better)
Translates to: MSSGTGISIQFLPVR*SVGVRCKSFWYSIL
Trigger: TAAGATGCTGTACCAGAATGACTTACACCTGACTCCCACGCTCCACCTCACCGGCAAGAACTGGATAGAAATCCCAGTGCCTGAAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 90 bp TTTGTTTCTCTCATTTTCCTTTACGTCCTGTCTTCCCAAAGCCTATaGCCATATACACAAGTCCACGGGTGTTCCGCAGCTACCAGGTGC +
Preference number: 1 (lower is better)
Translates to: FVSLIFLYVLSSQSL*PYTQVHGCSAATRC
Trigger: GCACCTGGTAGCTGCGGAACACCCGTGGACTTGTGTATATGGTCATAGGCTTTGGGAAGACAGGACGTAAAGGAAAATGAGAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 90 bp TTGAAGAAGTTGAGCTCTAAGGCTTCTTCCAGCTCTGACGTTCTGTaGCTGGTAGTATACCCAGAGCTCAGGAAAGGATGGCCCATTTAT +
Preference number: 1 (lower is better)
Translates to: LKKLSSKASSSSDVL*LVVYPELRKGWPIY
Trigger: ATAAATGGGCCATCCTTTCCTGAGCTCTGGGTATACTACCAGTCACAGAACGTCAGAGCTGGAAGAAGCCTTAGAGCTCAACTTCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR GCA 90 bp AGCCTAGAGCTCAGGTATAGGCGTCAGTGTCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTAAAGAAAATCCTTGCGTGGGTTCTA +
Preference number: 1 (lower is better)
Translates to: SLELRYRRQCHHGSY*LVPLNLKKILAWVL
Trigger: TAGAACCCACGCAAGGATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGACGCCTATACCTGAGCTCTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 90 bp TTTGCCCATGAAGTTCTCAGCAAAGCAGGTGTATTTGCCTTCATCTaGCCGGCTGATGTTTCTTATGATCAAGGTGCCATCTGGAGTTAC +
Preference number: 1 (lower is better)
Translates to: FAHEVLSKAGVFAFI*PADVSYDQGAIWSY
Trigger: GTAACTCCAGATGGCACCTTGATCATAAGAAACATCAGCCGGTCAGATGAAGGCAAATACACCTGCTTTGCTGAGAACTTCATGGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 90 bp TTCTGCAAGCAAGCTCATGTACAAGTCACTCTAGCAGGAGGCTGTTaGATTTTACAAGCTTGCATGTCCTCAGGTCACCTATTGTCTTAT +
Preference number: 1 (lower is better)
Translates to: FCKQAHVQVTLAGGC*ILQACMSSGHLLSY
Trigger: ATAAGACAATAGGTGACCTGAGGACATGCAAGCTTGTAAAATGCAACAGCCTCCTGCTAGAGTGACTTGTACATGAGCTTGCTTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 90 bp TGGACCTCATTAGCATTAAGGTACTTACTTGTGAGTAACTATCGTTaGCCTGAAGCAAGTTTAGTGGCTGTAGCCTCTAGCTTCACTGGT +
Preference number: 1 (lower is better)
Translates to: WTSLALRYLLVSNYR*PEASLVAVASSFTG
Trigger: ACCAGTGAAGCTAGAGGCTACAGCCACTAAACTTGCTTCAGGCCAACGATAGTTACTCACAAGTAAGTACCTTAATGCTAATGAGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 90 bp CTGTTCAATGTGGTAACCACTAGCCACGTAGGGCTATCGAGCACTTaGCATGTGGCTATTGCGACTGAAGAACGACATTTTACATTTTAT +
Preference number: 1 (lower is better)
Translates to: LFNVVTTSHVGLSST*HVAIATEERHFTFY
Trigger: ATAAAATGTAAAATGTCGTTCTTCAGTCGCAATAGCCACATGTCAAGTGCTCGATAGCCCTACGTGGCTAGTGGTTACCACATTGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR GCA 90 bp TCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATCCTTaGGTGGGTTCTATCCTGCGGCAGAATATAAAATATCCTACCTCC +
Preference number: 1 (lower is better)
Translates to: SWKLLPGASQFKENP*VGSILRQNIKYPTS
Trigger: GGAGGTAGGATATTTTATATTCTGCCGCAGGATAGAACCCACGCAAGGATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 90 bp CTCAGGTCACCTATTGTCTTATTAAACCTTAGTCAGTACTCTACCTaGAATCTCAGGCTGCAGGAACATTTATTTTGTTGTCGTTCTATC +
Preference number: 1 (lower is better)
Translates to: LRSPIVLLNLSQYST*NLRLQEHLFCCRSI
Trigger: GATAGAACGACAACAAAATAAATGTTCCTGCAGCCTGAGATTTCAGGTAGAGTACTGACTAAGGTTTAATAAGACAATAGGTGACCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp GGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GAGCVRRRWRPAAAQREGAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...CCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp GAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCC +
Preference number: 2 (lower is better)
Translates to: EVAAEGASWSWRWQKGWQGWQAQ*QPGCRP
Trigger: GGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCC...CTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR CCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTTGTGTCCGTCGGAGGTaGCGTCCAGCTGCGGCGCAG +
Preference number: 2 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVCVRRR*RPAAAQ
Trigger: CTGCGCCGCAGCTGGACGCCACCTCCGACGGACACA...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp CGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCCCAGTCTGGGACACGAAGTaGCGCCCGTCCGTCGGGATG +
Preference number: 2 (lower is better)
Translates to: RRGGGFMVVALAEGLAGPVWDTK*RPSVGM
Trigger: CATCCCGACGGACGGGCGTCACTTCGTGTCCCAGAC...TGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp GCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: AEGAQAPSLRHRGAGSQPEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...CGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CCAAAGTGTCTTGGTCCCCCGCGGGTCTCACAGCCGAAGCGGAGGATGGCCTCCCCACCGATAGGTGGCTaGAGGGCTGGCCCGGGCGCG +
Preference number: 2 (lower is better)
Translates to: PKCLGPPRVSQPKRRMASPPIGG*RAGPGA
Trigger: CGCGCCCGGGCCAGCCCTCCAGCCACCTATCGGTGG...GGAGGCCATCCTCCGCTTCGGCTGTGAGACCCGCGGGGGACCAAGACACTTTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCAGGGTCCTTGCTGCTaGTCGAGGGAGAAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVQGPCC*SREKAG
Trigger: TCCCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTG...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp CAGCTTGGAGAACCGCAGGTCCCCAGCCAACACCTCCACCCGGTTCTGGGAGGCGGCCCGGGCGCGGCATaGCAGCAACACCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: QLGEPQVPSQHLHPVLGGGPGAA*QQHLLL
Trigger: GAGGAGCAGGTGTTGCTGGCATGCCGCGCCCGGGCC...GCCTCCCAGAACCGGGTGGAGGTGTTGGCTGGGGACCTGCGGTTCTCCAAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCCAGGCATCGGGGCGCTaGTTCTCAGCCGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LKGLRLPASGIGALVLSRQASGR*FSAAWA
Trigger: TGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTG...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGGGGGCTTCATGGTCGTaGCGTTGGCAGAAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGGASWS*RWQKGW
Trigger: CCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCC...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp ACCGAGGGGGCTGCTTCCCTGGTCCGGATTTTGCTGGAGGGCCCACTAGGCTCCCAGGCACTGTCCTCCTaGCCTGCGAGCCCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: TEGAASLVRILLEGPLGSQALSS*PASPSP
Trigger: CGGGGAGGGGCTCGCAGGCCAGGAGGACAGTGCCTG...GGAGCCTAGTGGGCCCTCCAGCAAAATCCGGACCAGGGAAGCAGCCCCCTCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp CGGACCAGGACTGTGGCCTCCTTGGACGCGCTGTCCACCACCGTCTGGGCCATGACCTCCACCCGGTTCTaGGAGGCCAGAGGCTCCCCG +
Preference number: 2 (lower is better)
Translates to: RTRTVASLDALSTTVWAMTSTRF*EARGSP
Trigger: CGGGGAGCCTCTGGCCTCCCAGAACCGGGTGGAGGT...CATGGCCCAGACGGTGGTGGACAGCGCGTCCAAGGAGGCCACAGTCCTGGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCCACCACCACACCTCCTaGGGGACCTGGCGGACAGAG +
Preference number: 2 (lower is better)
Translates to: LKGLRLPASGIGALVLSRHHHTS*GTWRTE
Trigger: CTCTGTCCGCCAGGTCCCCCAGGAGGTGTGGTGGTG...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR-3UTR TCA 90 bp CGGACCAGGACTGTGGCCTCCTTGGACGCGCTGTCCACCACCGTCTGGGCCATGGGATGGCCTCCCTGCTaGCAACGGTGCCCACTGGGT +
Preference number: 2 (lower is better)
Translates to: RTRTVASLDALSTTVWAMGWPPC*QRCPLG
Trigger: ACCCAGTGGGCACCGTTGTCAGCAGGGAGGCCATCC...CATGGCCCAGACGGTGGTGGACAGCGCGTCCAAGGAGGCCACAGTCCTGGTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp CGGACCAGGACTGTGGCCTCCTTGGACGCGCTGTCCACCACCGTCTGGGCCATGGCTGAGCCTGCACGATaGTGCGGCCCTGCACGGTGT +
Preference number: 2 (lower is better)
Translates to: RTRTVASLDALSTTVWAMAEPAR*CGPARC
Trigger: ACACCGTGCAGGGCCGCATCATCGTGCAGGCTCAGC...CATGGCCCAGACGGTGGTGGACAGCGCGTCCAAGGAGGCCACAGTCCTGGTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCCGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: LKGLRLPASGIGALVLSRRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp AGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGCGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: RGSGSQPQASGRWFSAAWRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...CCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTTCAGACCAAGGCTGGTaGCCCTTTCCACCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVSDQGW*PFPPRA
Trigger: GGCCCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGA...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp GTCCCGCTGCCCCCTGTGAAGGGCCACCTGTCGGAGCATGGGCTTTGGGGTTTCAGCAGAGTCTGGGGCTaGAGGTCGGGGAGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: VPLPPVKGHLSEHGLWGFSRVWG*RSGRPS
Trigger: GCTCGGCCTCCCCGACCTGCAGCCCCAGACTCTGCT...GAAACCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR GCA 90 bp GGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACACGATGATGCGGCCCTaGACGGTGTCTCGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: GVGRRAGRPSASPVVGPHTMMRP*TVSRPL
Trigger: CAAGGGCCGAGACACCGTGCAGGGCCGCATCATCGT...GTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp CAGCTTGGAGAACCGCAGGTCCCCAGCCAACACCTCCACCCGGTTCTGGGAGGCGGGCTTGCCGGCGGCTaGACAGCCCCAACGCAGGTT +
Preference number: 2 (lower is better)
Translates to: QLGEPQVPSQHLHPVLGGGLAGG*TAPTQV
Trigger: AACCTGCGTTGGGGCTGTGCAGCCGCCGGCAAGCCC...GCCTCCCAGAACCGGGTGGAGGTGTTGGCTGGGGACCTGCGGTTCTCCAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp CTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGAAGGCGGGAGAGCTCTTaGTCCCAGGGCTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: LCPSEVASSCGAEGGVPGRRESS*SQGLPF
Trigger: GAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCT...TCCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp GGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACCAGTCCAAGGCCGTCTaGGAGCGGATCTGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: GVGRRAGRPSASPVVGPHQSKAV*ERIWPG
Trigger: ACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTG...GTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CGGACCAGGACTGTGGCCTCCTTGGACGCGCTGTCCACCACCGTCTGGGCCATGGATGCCTCAGAGCCTTaGCCTGGCTGGAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: RTRTVASLDALSTTVWAMDASEP*PGWSLA
Trigger: GGCCAGGCTCCAGCCAGGCCAAGGCTCTGAGGCATC...CATGGCCCAGACGGTGGTGGACAGCGCGTCCAAGGAGGCCACAGTCCTGGTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCAGTCACCCAGCCACCTaGAGTGGCGCTGTCAATCGG +
Preference number: 2 (lower is better)
Translates to: LKGLRLPASGIGALVLSRSHPAT*SGAVNR
Trigger: CCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACT...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp TTGGGCAGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: LGRQEPLGSYRGQRQGPCEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...GCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCTGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCTACTTGGTGTTGGGATaGAGGCCGCTGACTCGGGCA +
Preference number: 2 (lower is better)
Translates to: PASGIGALVLSRLGRQEPYLVLG*RPLTRA
Trigger: TGCCCGAGTCAGCGGCCTGCATCCCAACACCAAGTA...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCTGTGTCCGTCGGAGGTaGCGTCCAGCTGCGGCGCAG +
Preference number: 2 (lower is better)
Translates to: GRADCRQHWRGGRMIGHLCVRRR*RPAAAQ
Trigger: CTGCGCCGCAGCTGGACGCCACCTCCGACGGACACA...GAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TGTTGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGAACGAGGCCTGGGCCTaGGGACTAGGCTGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: CCQEVAAEGASWSWRWQKNEAWA*GLGWPS
Trigger: AGAGGGCCAGCCTAGTCCCCAGGCCCAGGCCTCGTT...CTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp GGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACGCGGTAGGACAAGCCTaGGTAGTGGGCAGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: GVGRRAGRPSASPVVGPHAVGQA*VVGRWV
Trigger: AACCCACCTGCCCACTACCCAGGCTTGTCCTACCGC...GTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CAA 90 bp GTGGGCTCAGCTGTGGTCCACTGCGGGGACAGGGAGCCGTCCACTTaGCGCCACTTGATCCGGGGGACAGGGTTCCCAAAGGCGAAGCAC +
Preference number: 2 (lower is better)
Translates to: VGSAVVHCGDREPST*RHLIRGTGFPKAKH
Trigger: GTGCTTCGCCTTTGGGAACCCTGTCCCCCGGATCAAGTGGCGCAAAGTGGACGGCTCCCTGTCCCCGCAGTGGACCACAGCTGAGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp GGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACAGTACACGAGTGCAGTaGGGCTCTCGGGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: GSGSGQVVLGIPGSRQGHSTRVQ*GSRAHP
Trigger: GGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACT...GTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp GCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGGGGCTCTTCCTCAGCTaGGTACACGAGTGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: AEGAQAPSLRHRGAGSQPGLFLS*VHECSE
Trigger: CTCACTGCACTCGTGTACTCAGCTGAGGAAGAGCCC...CGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACATGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: ERIWPGGPRYTWEQAGPHEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp GTGGTGTCGCCAATGTCCCTCACCACCACACCTCCTGGGGGACCTGGCGGACCTACTGGTGTCCAGCCCTaGTGTCCTCACTCGGTCCGC +
Preference number: 2 (lower is better)
Translates to: VVSPMSLTTTPPGGPGGPTGVQP*CPHSVR
Trigger: GCGGACCGAGTGAGGACAGCAGGGCTGGACACCAGT...AGGTCCGCCAGGTCCCCCAGGAGGTGTGGTGGTGAGGGACATTGGCGACACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp CCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCTCGAGGGAGGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: PLGSYRGQRQGPCCCSREAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...CTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp AAGCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCTCATGGTCGTGGCGTTaGCAGAAGGGCTGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: KLKGLRLPASGIGALVLSSWSWR*QKGWQA
Trigger: GGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGA...GCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp TCTCGTTGCTGTAGACAAAGTACTGGGCATCGGCGCCAGGCACCCGGGCGGTCTGGGTGGGCTCAGCTGTaGTCCACTGCGGGGACAGGG +
Preference number: 2 (lower is better)
Translates to: SRCCRQSTGHRRQAPGRSGWAQL*STAGTG
Trigger: CCCTGTCCCCGCAGTGGACCACAGCTGAGCCCACCC...AGACCGCCCGGGTGCCTGGCGCCGATGCCCAGTACTTTGTCTACAGCAACGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp TCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCGCTGTCAATCGGGATaGCAGGGTCAGGTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: SGHLGSRKGLAVSVGGGVRCQSG*QGQVGS
Trigger: ACTGCCAACCTGACCCTGTCATCCCGATTGACAGCG...GACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp AGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCGGAGAGGTGGGCGCATaGTTGGCCATCTCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: RQEPLGSYRGQRQGPCCCGEVGA*LAISCP
Trigger: TGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCC...GCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp GCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAGTACACGAGTGCAGTaGGGCTCTCGGGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: ADCRQHWRGGRMIGHLLPSTRVQ*GSRAHP
Trigger: GGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACT...GGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp AAAGCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: KAEGAQAPSLRHRGAGSQRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...CTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp CCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGCGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: PSGSGSGQVVLGIPGSRQRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...CTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp AGGCACCCGGGCGGTCTGCCAGTGAGTGCTGCCCTGCCTGCGGAAGGACAGCAGCACTCGGTCCGCAGCTaGTTCTTTGTCCCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: RHPGGLPVSAALPAEGQQHSVRS*FFVPSF
Trigger: AAAGCTGGGGACAAAGAAGCAGCTGCGGACCGAGTG...CTGCTGTCCTTCCGCAGGCAGGGCAGCACTCACTGGCAGACCGCCCGGGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR GCA 90 bp AGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCACTGGTGTCCAGCCCTaGTGTCCTCACTCGGTCCGC +
Preference number: 2 (lower is better)
Translates to: RQEPLGSYRGQRQGPCCCTGVQP*CPHSVR
Trigger: GCGGACCGAGTGAGGACAGCAGGGCTGGACACCAGT...GCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp AAAGCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGGGTGCCAGGGTGTGGTaGTGGGCGGACTGCCATGTT +
Preference number: 2 (lower is better)
Translates to: KAEGAQAPSLRHRGAGSQGARVW*WADCHV
Trigger: AACATGGCAGTCCGCCCAGCACCACACCCTGGCACC...CTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAGGGTCAGGTTGGTGTGTCCGTCGGAGGTaGCGTCCAGCTGCGGCGCAG +
Preference number: 2 (lower is better)
Translates to: VTQPPEVALSIGMTGSGWCVRRR*RPAAAQ
Trigger: CTGCGCCGCAGCTGGACGCCACCTCCGACGGACACA...CCAACCTGACCCTGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp AAGGCCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: KAVWERIWPGGPRYTWEQAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...CTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGAATCTCAGACCAAGGCTaGTGCCCCTTTCCACCAAGG +
Preference number: 2 (lower is better)
Translates to: LCPSEVASSCGAEGGVPGISDQG*CPFPPR
Trigger: CCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGAT...TCCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCAGTCCAAGGCCGTCTaGGAGCGGATCTGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGQSKAV*ERIWPG
Trigger: ACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTG...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp TCTTCCTCAGCTGAGTACACGAGTGCAGTGAGGCTCTCGGGCCCATCCCCGCGGTCATGGTCGTGGCGTTaGCAGAAGGGCTGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: SSSAEYTSAVRLSGPSPRSWSWR*QKGWQA
Trigger: GGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGA...CCGCGGGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACTCAGCTGAGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR CCA 90 bp ACCGAGGGGGCTGCTTCCCTGGTCCGGATTTTGCTGGAGGGCCCACTAGGCTCCCGGTGTCTCGGCCCTTaGAGTTCTCCGCCTCACACT +
Preference number: 2 (lower is better)
Translates to: TEGAASLVRILLEGPLGSRCLGP*SSPPHT
Trigger: AGTGTGAGGCGGAGAACTCCAAGGGCCGAGACACCG...GGAGCCTAGTGGGCCCTCCAGCAAAATCCGGACCAGGGAAGCAGCCCCCTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp GCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAGTCACCCAGCCACCTaGAGTGGCGCTGTCAATCGG +
Preference number: 2 (lower is better)
Translates to: ADCRQHWRGGRMIGHLLPSHPAT*SGAVNR
Trigger: CCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACT...GGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR TCA 90 bp CAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTGGGAGAGGTGGGCGCATaGTTGGCCATCTCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: QAALERWAHDWPSPAQTLGEVGA*LAISCP
Trigger: TGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCC...CAGGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR TCA 90 bp CGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAAGTCCCGCTGCCCCCTGTaGAGGGCCACCTGTCGGAGC +
Preference number: 2 (lower is better)
Translates to: RHLGCDYLRPRLVPLSTKSRCPL*RATCRS
Trigger: GCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGA...CTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR TCA 90 bp CACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTGGAGGGACCCACGGAGTGGGAAATaGCGGTGCCAGGGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: HWRGGRMIGHLLPKPWRDPRSGK*RCQGVV
Trigger: CACCACACCCTGGCACCGTCATTTCCCACTCCGTGG...GTCCCTCCAGGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp GTGGTGTCGCCAATGTCCCTCACCACCACACCTCCTGGGGGACCTGGCGGACCTCTAAGGCATGTCATGTaGGGTCAGGAAGGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: VVSPMSLTTTPPGGPGGPLRHVM*GQEGPA
Trigger: AGCCGGGCCTTCCTGACCTCACATGACATGCCTTAG...AGGTCCGCCAGGTCCCCCAGGAGGTGTGGTGGTGAGGGACATTGGCGACACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp TGTTGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGTCACGGGATTCAGCCTaGAGTCAGGGGCGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: CCQEVAAEGASWSWRWQKSRDSA*SQGRVL
Trigger: AAGCACTCGCCCCTGACTTCAGGCTGAATCCCGTGA...CTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp GTAGGCCCTCACGGTCACATGGTACTTGGTGTTGGGATGCAGGCCGCTGACTCGAGTCCATCCAGGGGGTaGGGCCCAGCACCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: VGPHGHMVLGVGMQAADSSPSRG*GPAPVQ
Trigger: CTGCACAGGTGCTGGGCCTCACCCCCTGGATGGACT...CGAGTCAGCGGCCTGCATCCCAACACCAAGTACCATGTGACCGTGAGGGCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR GCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCAAGGATGGTGAGGTGTaGACTTCGCTCCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: PASGIGALVLSRLGRQEPKDGEV*TSLQFF
Trigger: GAAGAACTGGAGCGAAGTGCACACCTCACCATCCTT...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp CAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTGCGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: QAALERWAHDWPSPAQTLRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...CAGGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp GCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTTCAGACCAAGGCTGGTaGCCCTTTCCACCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: AGRPSASPVVGPHGHMVLSDQGW*PFPPRA
Trigger: GGCCCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGA...AAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp CAGTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGCCATTCATGTCCTGCTaGACGGGTTCCCAGGTCACG +
Preference number: 2 (lower is better)
Translates to: QCQATLAAGRGWLCPSEVPFMSC*TGSQVT
Trigger: CGTGACCTGGGAACCCGTGCAGCAGGACATGAATGG...CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp CGATGTTTGCAGGATTGGTCCGAACCTGCTTCCACTTCCCTGCAGGTGGAGTGCGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCC +
Preference number: 2 (lower is better)
Translates to: RCLQDWSEPASTSLQVECGWQAQ*QPGCRP
Trigger: GGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCC...GCACTCCACCTGCAGGGAAGTGGAAGCAGGTTCGGACCAATCCTGCAAACATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR GCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCAAGTCCAGGAGATGTTaGCAGGAGGTCGCCGCGGAG +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGKSRRC*QEVAAE
Trigger: CTCCGCGGCGACCTCCTGGCAACATCTCCTGGACTT...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCAAACCAGCCACTCTCTaGCACAGTGTCAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: RGGRADCRQHWRGGRMIGKPATL*HSVRPP
Trigger: AGGTGGCCTGACACTGTGCCAGAGAGTGGCTGGTTT...GCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TCGGAGCTTCCGAGGACATATGCCCTTCAAGATGCCTGTCCCGCTGCCCCCTGTCAGGCATCGGGGCGCTaGTTCTCAGCCGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: SELPRTYALQDACPAAPCQASGR*FSAAWA
Trigger: TGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTG...ACAGGGGGCAGCGGGACAGGCATCTTGAAGGGCATATGTCCTCGGAAGCTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CCA 90 bp GGTCTTGGAGGGGTGGGAGACCCCACCAAGACAAGCCCTTTAGTCACCCAGCCACAGGCATCGGGGCGCTaGTTCTCAGCCGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: GLGGVGDPTKTSPLVTQPQASGR*FSAAWA
Trigger: TGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTG...TGGCTGGGTGACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp AAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGCAGGCATCGGGGCGCTaGTTCTCAGCCGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: KCKQSKAVWERIWPGGPRQASGR*FSAAWA
Trigger: TGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTG...CCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp ACCGAGGGGGCTGCTTCCCTGGTCCGGATTTTGCTGGAGGGCCCACTAGGCTCCTGGGTCTTGGAGGGGTaGGAGACCCCACCAAGACAA +
Preference number: 2 (lower is better)
Translates to: TEGAASLVRILLEGPLGSWVLEG*ETPPRQ
Trigger: TTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACCCA...GGAGCCTAGTGGGCCCTCCAGCAAAATCCGGACCAGGGAAGCAGCCCCCTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR-3UTR CCA 90 bp CCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCAGGTGGGCGCATGATTaGCCATCTCCTGCCCAAACC +
Preference number: 2 (lower is better)
Translates to: PGLGLLSSGGVRIGSQRARWAHD*PSPAQT
Trigger: GGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCT...GGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp AGTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGGCAGCACTGGAGAGGTaGGCGCATGATTGGCCATCT +
Preference number: 2 (lower is better)
Translates to: SVRPPWQQEGAGCVRRRWAALER*AHDWPS
Trigger: AGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGC...CCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCATCCCAGACCCTCTCTaGACCACCTCCATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: LKGLRLPASGIGALVLSRIPDPL*TTSISS
Trigger: TGAGGAAATGGAGGTGGTCCAGAGAGGGTCTGGGAT...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CCA 90 bp CCCGTCCGTCGGGATGAAGTTGGGGAACTCGTTGAGGAGCCAGCGGTAGGACAAAACGAGGCCTGGGCCTaGGGACTAGGCTGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PVRRDEVGELVEEPAVGQNEAWA*GLGWPS
Trigger: AGAGGGCCAGCCTAGTCCCCAGGCCCAGGCCTCGTT...TTGTCCTACCGCTGGCTCCTCAACGAGTTCCCCAACTTCATCCCGACGGACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CCA 90 bp CAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTGGCCAGGGTGTGGTGCTaGGCGGACTGCCATGTTCTC +
Preference number: 2 (lower is better)
Translates to: QAALERWAHDWPSPAQTLARVWC*ADCHVL
Trigger: GAGAACATGGCAGTCCGCCCAGCACCACACCCTGGC...CAGGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CAGGGGGTGAGGCCCAGCACCTGTGCAGTCTCGGCATTGCCCTCGATGTTTGCAGCCAGGGTGTGGTGCTaGGCGGACTGCCATGTTCTC +
Preference number: 2 (lower is better)
Translates to: QGVRPSTCAVSALPSMFAARVWC*ADCHVL
Trigger: GAGAACATGGCAGTCCGCCCAGCACCACACCCTGGC...TGCAAACATCGAGGGCAATGCCGAGACTGCACAGGTGCTGGGCCTCACCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR-3UTR CCA 90 bp TGTTGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGAGCCCCAACGCAGGTTaGAGCCAATGTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: CCQEVAAEGASWSWRWQKSPNAG*SQCQPL
Trigger: CAGAGGCTGACATTGGCTCCAACCTGCGTTGGGGCT...CTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp AAGCTGTGCAGGCCCTGGATGGGACGGGTAAGTTGGAGGAGTCTTGGGGCCGAGAGTCACCCAGCCACCTaGAGTGGCGCTGTCAATCGG +
Preference number: 2 (lower is better)
Translates to: KLCRPWMGRVSWRSLGAESHPAT*SGAVNR
Trigger: CCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACT...CTCGGCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR TCA 90 bp TCTCCGGGGAAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTAGTCACCCAGCCACCTaGAGTGGCGCTGTCAATCGG +
Preference number: 2 (lower is better)
Translates to: SPGKCKQSKAVWERIWPGSHPAT*SGAVNR
Trigger: CCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACT...ACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTTCCCCGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR TCA 90 bp GTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAGGGTCAGGTTGGAGTACACGAGTGCAGTaGGGCTCTCGGGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: VTQPPEVALSIGMTGSGWSTRVQ*GSRAHP
Trigger: GGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACT...CCAACCTGACCCTGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp GTAGGCCCTCACGGTCACATGGTACTTGGTGTTGGGATGCAGGCCGCTGACTCGAGTACACGAGTGCAGTaGGGCTCTCGGGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: VGPHGHMVLGVGMQAADSSTRVQ*GSRAHP
Trigger: GGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACT...CGAGTCAGCGGCCTGCATCCCAACACCAAGTACCATGTGACCGTGAGGGCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR TCA 90 bp GTGGTGTCGCCAATGTCCCTCACCACCACACCTCCTGGGGGACCTGGCGGACCTGTAGTTGCCCAGGTCTaGGGCATTGGTTCGGGCAAT +
Preference number: 2 (lower is better)
Translates to: VVSPMSLTTTPPGGPGGPVVAQV*GIGSGN
Trigger: ATTGCCCGAACCAATGCCTCAGACCTGGGCAACTAC...AGGTCCGCCAGGTCCCCCAGGAGGTGTGGTGGTGAGGGACATTGGCGACACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp GCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTCCCAGCACTAGGCTTTaGAAACTTCAGGGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: ARRSPRRGLHGRGVGRRAPSTRL*KLQGSV
Trigger: TACTGAGCCCTGAAGTTTTCAAAGCCTAGTGCTGGG...AGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR-3UTR GCA 90 bp GTGCAGAATGGGTCTTGGAGGGGTGGGAGACCCCACCAAGACAAGCCCTTTAGTGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 2 (lower is better)
Translates to: VQNGSWRGGRPHQDKPFSEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...ACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACCCATTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp GATTTTGCTGGAGGGCCCACTAGGCTCCCCAGTGCCCAGAATGTTGCTGGCTATAGCAGAGTCTGGGGCTaGAGGTCGGGGAGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: DFAGGPTRLPSAQNVAGYSRVWG*RSGRPS
Trigger: GCTCGGCCTCCCCGACCTGCAGCCCCAGACTCTGCT...ATAGCCAGCAACATTCTGGGCACTGGGGAGCCTAGTGGGCCCTCCAGCAAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR-3UTR GCA 90 bp CCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCGACACACAGCATGAATaGTGCATTCCCCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: PGLGLLSSGGVRIGSQRADTQHE*CIPLPG
Trigger: GCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTC...GGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp TGTTGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGACACACAGCATGAATaGTGCATTCCCCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: CCQEVAAEGASWSWRWQKDTQHE*CIPLPG
Trigger: GCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTC...CTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTCCATTCATGTCCTGCTaGACGGGTTCCCAGGTCACG +
Preference number: 2 (lower is better)
Translates to: AGRPSASPVVGPHGHMVLPFMSC*TGSQVT
Trigger: CGTGACCTGGGAACCCGTGCAGCAGGACATGAATGG...AAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR GCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCTACTTGGTGTTGGGATaGAGGCCGCTGACTCGGGCA +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGYLVLG*RPLTRA
Trigger: TGCCCGAGTCAGCGGCCTGCATCCCAACACCAAGTA...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp ATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCC +
Preference number: 2 (lower is better)
Translates to: IVTWVVTISDQGWCPFPPGWQAQ*QPGCRP
Trigger: GGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCC...TGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACATAAGTCCAGGAGATGTTaGCAGGAGGTCGCCGCGGAG +
Preference number: 2 (lower is better)
Translates to: ERIWPGGPRYTWEQAGPHKSRRC*QEVAAE
Trigger: CTCCGCGGCGACCTCCTGGCAACATCTCCTGGACTT...ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp ACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: TCSCLVFLPGLGLLSSGGAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...TCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LRGHRHLGCDYLRPRLVPAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...GGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp AAGCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCAAACCAGCCACTCTCTaGCACAGTGTCAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: KLKGLRLPASGIGALVLSKPATL*HSVRPP
Trigger: AGGTGGCCTGACACTGTGCCAGAGAGTGGCTGGTTT...GCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TGTTGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGAGGACTGCTCTCAAGTaGCGGAGTCCGTATAGGGTC +
Preference number: 2 (lower is better)
Translates to: CCQEVAAEGASWSWRWQKRTALK*RSPYRV
Trigger: GACCCTATACGGACTCCGCCACTTGAGAGCAGTCCT...CTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GGTCTTGGAGGGGTGGGAGACCCCACCAAGACAAGCCCTTTAGTCACCCAGCCAAGGCGGGAGAGCTCTTaGTCCCAGGGCTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: GLGGVGDPTKTSPLVTQPRRESS*SQGLPF
Trigger: GAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCT...TGGCTGGGTGACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CCCTCCGGGCCCTGTGGTCCGAATTTGTACCAGGGCATGGCCAATGTCTTCAGGAGGCGGGAGAGCTCTTaGTCCCAGGGCTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PSGPCGPNLYQGMANVFRRRESS*SQGLPF
Trigger: GAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCT...CCTGAAGACATTGGCCATGCCCTGGTACAAATTCGGACCACAGGGCCCGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CCCTTTTTCTCCGGGGAAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGCAGGCATCGGGGCGCTaGTTCTCAGCCGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: PFFSGEMQAVQGRLGADLQASGR*FSAAWA
Trigger: TGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTG...CAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTTCCCCGGAGAAAAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000639122.1
ENST00000639302.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp GCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCCTCCTGCCCAAACCCTaGAGGGACTGTGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: ADCRQHWRGGRMIGHLLPLLPKP*RDCAEW
Trigger: CCATTCTGCACAGTCCCTCCAGGGTTTGGGCAGGAG...GGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCGCAGCACTGGAGAGGTaGGCGCATGATTGGCCATCT +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGAALER*AHDWPS
Trigger: AGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGC...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCGACTGCAGGCAGCACTaGAGAGGTGGGCGCATGATT +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGDCRQH*RGGRMI
Trigger: AATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTC...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCGGTCCTAGGTATACCTaGGAGCAGGCAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGGPRYT*EQAGPH
Trigger: ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACC...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp AGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCGTCTGGGAGCGGATCTaGCCAGGTGGTCCTAGGTAT +
Preference number: 2 (lower is better)
Translates to: RQEPLGSYRGQRQGPCCCVWERI*PGGPRY
Trigger: ATACCTAGGACCACCTGGCCAGATCCGCTCCCAGAC...GCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp GCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTGTCTGGGAGCGGATCTaGCCAGGTGGTCCTAGGTAT +
Preference number: 2 (lower is better)
Translates to: AGRPSASPVVGPHGHMVLVWERI*PGGPRY
Trigger: ATACCTAGGACCACCTGGCCAGATCCGCTCCCAGAC...AAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGAGGATGTGTGTCCCTaGAGCCTAATACCCTTACTG +
Preference number: 2 (lower is better)
Translates to: EVAAEGASWSWRWQKGWQEDVCP*SLIPLL
Trigger: CAGTAAGGGTATTAGGCTCCAGGGACACACATCCTC...CTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp GTTGGAGGCCAGGCACTGGTAGACCCCGGCATCCTGTGCCTTGGTGGGGTTCATGGCCCGAAGGTGGTTTaGGATCCCAGGGCTGAACTC +
Preference number: 2 (lower is better)
Translates to: VGGQALVDPGILCLGGVHGPKVV*DPRAEL
Trigger: GAGTTCAGCCCTGGGATCCCAAACCACCTTCGGGCC...ATGAACCCCACCAAGGCACAGGATGCCGGGGTCTACCAGTGCCTGGCCTCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CCA 90 bp GTAGACCCCGGCATCCTGTGCCTTGGTGGGGTTCATGATGACCAGGTTGCCCCCAGACAGGCCCGAAGGTaGTTTGGGATCCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VDPGILCLGGVHDDQVAPRQARR*FGIPGL
Trigger: CAGCCCTGGGATCCCAAACCACCTTCGGGCCTGTCT...GGGGGCAACCTGGTCATCATGAACCCCACCAAGGCACAGGATGCCGGGGTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CCA 90 bp AACCGGGCCTTGATGCTGGGTGCAAAGAGCCGGGTATCTTCAGCAGCCAGGTTGTCTTCCACCGATAGGTaGCTGGAGGGCTGGCCCGGG +
Preference number: 2 (lower is better)
Translates to: NRALMLGAKSRVSSAARLSSTDR*LEGWPG
Trigger: CCCGGGCCAGCCCTCCAGCCACCTATCGGTGGAAGA...CAACCTGGCTGCTGAAGATACCCGGCTCTTTGCACCCAGCATCAAGGCCCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp CAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCTCGCGGTCACATGGTACTTaGTGTTGGGATGCAGGCCGC +
Preference number: 2 (lower is better)
Translates to: QEPLGSYRGQRQGPCCCSRSHGT*CWDAGR
Trigger: GCGGCCTGCATCCCAACACCAAGTACCATGTGACCG...CGAGCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GTAGGCCCTCACGGTCACATGGTACTTGGTGTTGGGATGCAGGCCGCTGACTCGGGGGCTTCATGGTCGTaGCGTTGGCAGAAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: VGPHGHMVLGVGMQAADSGASWS*RWQKGW
Trigger: CCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCC...CGAGTCAGCGGCCTGCATCCCAACACCAAGTACCATGTGACCGTGAGGGCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR CCA 90 bp ACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGACGGTGCCAGGGTGTaGTGCTGGGCGGACTGCCAT +
Preference number: 2 (lower is better)
Translates to: TCSCLVFLPGLGLLSSGGDGARV*CWADCH
Trigger: ATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTC...TCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CAA 90 bp TGCACGGGTTCCCAGGTCACGTTCATCTCTGAGGATGAGACCCCTTaGGCCCACACCTTGGTAGGGGCCACCCTGGGCTCTTCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: CTGSQVTFISEDETP*AHTLVGATLGSSSA
Trigger: AGCTGAGGAAGAGCCCAGGGTGGCCCCTACCAAGGTGTGGGCCAAAGGGGTCTCATCCTCAGAGATGAACGTGACCTGGGAACCCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR CAA 90 bp TTCTCTGCCACACACTGGTACATGCCCGAGTCTTCCAGGCTCAGCTaGGAGAACCGCAGGTCCCCAGCCAACACCTCCACCCGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: FSATHWYMPESSRLS*ENRRSPANTSTRFW
Trigger: CCAGAACCGGGTGGAGGTGTTGGCTGGGGACCTGCGGTTCTCCAAGCTGAGCCTGGAAGACTCGGGCATGTACCAGTGTGTGGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp GTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGGGCTCTTCCTCAGCTaGGTACACGAGTGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: VPAGPRTALKWRSPYRVPGLFLS*VHECSE
Trigger: CTCACTGCACTCGTGTACTCAGCTGAGGAAGAGCCC...TGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp CGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCGCATCTTATAGCCGGTaGCTGCAGACTCATTTCGGA +
Preference number: 2 (lower is better)
Translates to: RGGRADCRQHWRGGRMIGASYSR*LQTHFG
Trigger: TCCGAAATGAGTCTGCAGTCACCGGCTATAAGATGC...GCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp CCCTCCGGGCCCTGTGGTCCGAATTTGTACCAGGGCATGGCCAATGTCTTCAGGTCCAGTTCTTGCCGGTaGGGTGGAGCGTGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: PSGPCGPNLYQGMANVFRSSSCR*GGAWES
Trigger: TGACTCCCACGCTCCACCTCACCGGCAAGAACTGGA...CCTGAAGACATTGGCCATGCCCTGGTACAAATTCGGACCACAGGGCCCGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTTTAAAGAAAATCCTTaGGTGGGTTCTATCCTGCGG +
Preference number: 2 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGFKENP*VGSILR
Trigger: CCGCAGGATAGAACCCACGCAAGGATTTTCTTTAAA...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp CGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCAAGGATGGTGAGGTGTaGACTTCGCTCCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: RGGRADCRQHWRGGRMIGKDGEV*TSLQFF
Trigger: GAAGAACTGGAGCGAAGTGCACACCTCACCATCCTT...GCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp TTCCGAGGACATATGCCCTTCAAGATGCCTGTCCCGCTGCCCCCTGTGAAGGGCCAGCGTCAGGGTCCTTaGTGCTGCTCGAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: FRGHMPFKMPVPLPPVKGQRQGP*CCSREK
Trigger: CTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTG...GCCCTTCACAGGGGGCAGCGGGACAGGCATCTTGAAGGGCATATGTCCTCGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR GCA 90 bp AAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGCAGCGTCAGGGTCCTTaGTGCTGCTCGAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: KCKQSKAVWERIWPGGPRQRQGP*CCSREK
Trigger: CTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTG...CCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp AAGACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGAGCAGAGTCTGGGGCTaGAGGTCGGGGAGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: KTSPLVTQPPEVALSIGMSRVWG*RSGRPS
Trigger: GCTCGGCCTCCCCGACCTGCAGCCCCAGACTCTGCT...CATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR GCA 90 bp CCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCACACAGCATGAATGCTaGATTCCCCTCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PRPSGSGSGQVVLGIPGSTQHEC*IPLPGR
Trigger: CCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGT...GCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR GCA 90 bp GACCTGCTGCCCCACCAGTGCATAGGTCTCTGCTGGGAACCGGGCCTTGATGCTCCATTCATGTCCTGCTaGACGGGTTCCCAGGTCACG +
Preference number: 2 (lower is better)
Translates to: DLLPHQCIGLCWEPGLDAPFMSC*TGSQVT
Trigger: CGTGACCTGGGAACCCGTGCAGCAGGACATGAATGG...AGCATCAAGGCCCGGTTCCCAGCAGAGACCTATGCACTGGTGGGGCAGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp CTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCACTGGTGTCCAGCCCTaGTGTCCTCACTCGGTCCGC +
Preference number: 2 (lower is better)
Translates to: LRGHRHLGCDYLRPRLVPTGVQP*CPHSVR
Trigger: GCGGACCGAGTGAGGACAGCAGGGCTGGACACCAGT...GGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GTGGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTGGTCCGAATTTGTACAAGTCCAGGAGATGTTaGCAGGAGGTCGCCGCGGAG +
Preference number: 2 (lower is better)
Translates to: VDFCRDPIPSGPCGPNLYKSRRC*QEVAAE
Trigger: CTCCGCGGCGACCTCCTGGCAACATCTCCTGGACTT...GTACAAATTCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACTGTCACATGGAGAGGTaGATAGATCTCCCAGCACTA +
Preference number: 2 (lower is better)
Translates to: GVGRRAGRPSASPVVGPHCHMER*IDLPAL
Trigger: TAGTGCTGGGAGATCTATGCACCTCTCCATGTGACA...GTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR-3UTR CCA 90 bp CAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGTGTGTCCGTCGGAGGTaGCGTCCAGCTGCGGCGCAG +
Preference number: 2 (lower is better)
Translates to: QCWLRGHRHLGCDYLRPRCVRRR*RPAAAQ
Trigger: CTGCGCCGCAGCTGGACGCCACCTCCGACGGACACA...CCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGAAACCAGCCACTCTCTaGCACAGTGTCAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: PSGSGSGQVVLGIPGSRQKPATL*HSVRPP
Trigger: AGGTGGCCTGACACTGTGCCAGAGAGTGGCTGGTTT...CTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TTGGGCAGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCAAACCAGCCACTCTCTaGCACAGTGTCAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: LGRQEPLGSYRGQRQGPCKPATL*HSVRPP
Trigger: AGGTGGCCTGACACTGTGCCAGAGAGTGGCTGGTTT...GCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCTGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCAAGAAAATCCTTGCGTaGGTTCTATCCTGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: LKGLRLPASGIGALVLSRKKILA*VLSCGR
Trigger: TCTGCCGCAGGATAGAACCCACGCAAGGATTTTCTT...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGACTGCTCTCAAGTaGCGGAGTCCGTATAGGGTC +
Preference number: 2 (lower is better)
Translates to: PRPSGSGSGQVVLGIPGSRTALK*RSPYRV
Trigger: GACCCTATACGGACTCCGCCACTTGAGAGCAGTCCT...GCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CCAGCCCTGCTGTCCTCACTCGGTCCGCAGCTGCTTCTTTGTCCCCAGCTTTCCTGGGTCTTGGAGGGGTaGGAGACCCCACCAAGACAA +
Preference number: 2 (lower is better)
Translates to: PALLSSLGPQLLLCPQLSWVLEG*ETPPRQ
Trigger: TTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACCCA...GGAAAGCTGGGGACAAAGAAGCAGCTGCGGACCGAGTGAGGACAGCAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTGAGGTGGGCGCATGATTaGCCATCTCCTGCCCAAACC +
Preference number: 2 (lower is better)
Translates to: QAALERWAHDWPSPAQTLRWAHD*PSPAQT
Trigger: GGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCT...CAGGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp GTTGGAGGCCAGGCACTGGTAGACCCCGGCATCCTGTGCCTTGGTGGGGTTCATAGCACACTGAGGGGCTaGTCTTCAAAGACAGGCCCG +
Preference number: 2 (lower is better)
Translates to: VGGQALVDPGILCLGGVHSTLRG*SSKTGP
Trigger: CGGGCCTGTCTTTGAAGACCAGCCCCTCAGTGTGCT...ATGAACCCCACCAAGGCACAGGATGCCGGGGTCTACCAGTGCCTGGCCTCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CCA 90 bp CCAGCCCTGCTGTCCTCACTCGGTCCGCAGCTGCTTCTTTGTCCCCAGCTTTCCCGGTCACATGGTACTTaGTGTTGGGATGCAGGCCGC +
Preference number: 2 (lower is better)
Translates to: PALLSSLGPQLLLCPQLSRSHGT*CWDAGR
Trigger: GCGGCCTGCATCCCAACACCAAGTACCATGTGACCG...GGAAAGCTGGGGACAAAGAAGCAGCTGCGGACCGAGTGAGGACAGCAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR CCA 90 bp TCTCGTTGCTGTAGACAAAGTACTGGGCATCGGCGCCAGGCACCCGGGCGGTCTCTGTCCACCACCGTCTaGGCCATGCACGTGTACTTC +
Preference number: 2 (lower is better)
Translates to: SRCCRQSTGHRRQAPGRSLSTTV*AMHVYF
Trigger: GAAGTACACGTGCATGGCCCAGACGGTGGTGGACAG...AGACCGCCCGGGTGCCTGGCGCCGATGCCCAGTACTTTGTCTACAGCAACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CAA 90 bp GGAGTTACAGTCACTCTGCTGCTGTTGACCAAAATCTCCGTGCCTTaGCTCCAGAGCACCACGGCCTTTGGAGCTGCCCGGGGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: GVTVTLLLLTKISVP*LQSTTAFGAARGWQ
Trigger: CTGCCAGCCCCGGGCAGCTCCAAAGGCCGTGGTGCTCTGGAGCAAAGGCACGGAGATTTTGGTCAACAGCAGCAGAGTGACTGTAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CAA 90 bp CAGGGTGTGGTGCTGGGCGGACTGCCATGTTCTCCACCATCATGCTaGTGCCTGAAACCAGCACAAGCTGAGTCAGCTGGGCCTGGGACT +
Preference number: 2 (lower is better)
Translates to: QGVVLGGLPCSPPSC*CLKPAQAESAGPGT
Trigger: AGTCCCAGGCCCAGCTGACTCAGCTTGTGCTGGTTTCAGGCACAAGCATGATGGTGGAGAACATGGCAGTCCGCCCAGCACCACACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638577.1
3UTR-3UTR TCA 90 bp TCTAAGCTGTGCAGGCCCTGGATGGGACGGGTAAGTTGGAGGAGTCTTGGGGCCCGCTGTCAATCGGGATaGCAGGGTCAGGTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: SKLCRPWMGRVSWRSLGARCQSG*QGQVGS
Trigger: ACTGCCAACCTGACCCTGTCATCCCGATTGACAGCG...GGCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR TCA 90 bp ACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAAGTCACCCAGCCACCTaGAGTGGCGCTGTCAATCGG +
Preference number: 2 (lower is better)
Translates to: TCSCLVFLPGLGLLSSGGSHPAT*SGAVNR
Trigger: CCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACT...TCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp AACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCACCCAGCCACCTaGAGTGGCGCTGTCAATCGG +
Preference number: 2 (lower is better)
Translates to: NLFMSGVPAGPRTALKWRSHPAT*SGAVNR
Trigger: CCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACT...CCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp ACATATGCCCTTCAAGATGCCTGTCCCGCTGCCCCCTGTGAAGGGCCACCTGTCCTCTTCTGGGCTGTGTaGCCTTGGGAATCCCAGACC +
Preference number: 2 (lower is better)
Translates to: TYALQDACPAAPCEGPPVLFWAV*PWESQT
Trigger: GGTCTGGGATTCCCAAGGTCACACAGCCCAGAAGAG...GACAGGTGGCCCTTCACAGGGGGCAGCGGGACAGGCATCTTGAAGGGCATATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR GCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGTTTAAAGAAAATCCTTaGGTGGGTTCTATCCTGCGG +
Preference number: 2 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGFKENP*VGSILR
Trigger: CCGCAGGATAGAACCCACGCAAGGATTTTCTTTAAA...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGHHGSY*LVPLNL
Trigger: TAAATTGAGAGGCACCAGGCAGTAACTTCCATGATG...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp CAAGGACCAGAGAGCCAGGGCAAAGGGCTCTGTAAGGGGAGCCCAAATGTATGCCGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: QGPESQGKGLCKGSPNVCRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...GCATACATTTGGGCTCCCCTTACAGAGCCCTTTGCCCTGGCTCTCTGGTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp CAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTGACACAGCATGAATGCTaGATTCCCCTCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QAALERWAHDWPSPAQTLTQHEC*IPLPGR
Trigger: CCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGT...CAGGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR GCA 90 bp CTCACGATGTGGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTGGTCCGAGCCACATTTATCCTCTaGCCTTCCCAGAAACCTCCC +
Preference number: 2 (lower is better)
Translates to: LTMWTSAGIPSPPGPVVRATFIL*PSQKPP
Trigger: GGGAGGTTTCTGGGAAGGGCAGAGGATAAATGTGGC...TCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCACATCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp AAGCTGTGCAGGCCCTGGATGGGACGGGTAAGTTGGAGGAGTCTTGGGGCCGAGACTTGGACCATCTCCTaGCCCTCCAGTCACAGCTTC +
Preference number: 2 (lower is better)
Translates to: KLCRPWMGRVSWRSLGAETWTIS*PSSHSF
Trigger: GAAGCTGTGACTGGAGGGGCAGGAGATGGTCCAAGT...CTCGGCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp TCTCGTTGCTGTAGACAAAGTACTGGGCATCGGCGCCAGGCACCCGGGCGGTCTCGCCAGCCACAAACATaGAGAGAGGATGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: SRCCRQSTGHRRQAPGRSRQPQT*REDVCP
Trigger: GGGACACACATCCTCTCTGCATGTTTGTGGCTGGCG...AGACCGCCCGGGTGCCTGGCGCCGATGCCCAGTACTTTGTCTACAGCAACGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp CTTCATGAGCTTTCACTGGGTCTCGCTCCTCCTTGGAGAATTCCTGCAGAAAGCGGCCCGGGCGCGGCATaGCAGCAACACCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: LHELSLGLAPPWRIPAESGPGAA*QQHLLL
Trigger: GAGGAGCAGGTGTTGCTGGCATGCCGCGCCCGGGCC...GCTTTCTGCAGGAATTCTCCAAGGAGGAGCGAGACCCAGTGAAAGCTCATGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532366.2
3UTR-3UTR GCA 90 bp CGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAAGGGTGCCAGGGTGTGGTaGTGGGCGGACTGCCATGTT +
Preference number: 2 (lower is better)
Translates to: RHLGCDYLRPRLVPLSTKGARVW*WADCHV
Trigger: AACATGGCAGTCCGCCCAGCACCACACCCTGGCACC...CTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CCTTCCCAGAAACCTCCCAATACCAGGACACACAGCATGAATGCTGCATTCCCCTGTGTCCGTCGGAGGTaGCGTCCAGCTGCGGCGCAG +
Preference number: 2 (lower is better)
Translates to: PSQKPPNTRTHSMNAAFPCVRRR*RPAAAQ
Trigger: CTGCGCCGCAGCTGGACGCCACCTCCGACGGACACA...GGGGAATGCAGCATTCATGCTGTGTGTCCTGGTATTGGGAGGTTTCTGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCAGGAGTGAGTCAGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: YQDTQHECCIPLPGRSESAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...TGACTCACTCCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CCCACCAAGACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCAGGCGGGAGAGCTCTTaGTCCCAGGGCTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PTKTSPLVTQPPEVALSIRRESS*SQGLPF
Trigger: GAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCT...GATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGTCTTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp AGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCCCTCTCAACTCTTTTTaGCTCCCACCCCAAACAGCC +
Preference number: 2 (lower is better)
Translates to: RQEPLGSYRGQRQGPCCCPLNSF*LPPQTA
Trigger: GGCTGTTTGGGGTGGGAGCCAAAAAGAGTTGAGAGG...GCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TCTCCGGGGAAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTATCTCAGACCAAGGCTaGTGCCCCTTTCCACCAAGG +
Preference number: 2 (lower is better)
Translates to: SPGKCKQSKAVWERIWPGISDQG*CPFPPR
Trigger: CCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGAT...ACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTTCCCCGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp GTGGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTGGTCCGAATTTGTACCTCCTGCCCAAACCCTaGAGGGACTGTGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: VDFCRDPIPSGPCGPNLYLLPKP*RDCAEW
Trigger: CCATTCTGCACAGTCCCTCCAGGGTTTGGGCAGGAG...GTACAAATTCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GCCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTGGTGTTGGGATGCAGGACTGCAGGCAGCACTaGAGAGGTGGGCGCATGATT +
Preference number: 2 (lower is better)
Translates to: ASPVVGPHGHMVLGVGMQDCRQH*RGGRMI
Trigger: AATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTC...CTGCATCCCAACACCAAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp TCTCGTTGCTGTAGACAAAGTACTGGGCATCGGCGCCAGGCACCCGGGCGGTCTGCTGGGGCCTCAGAATaGAAGCAGTTCTACCTCCCA +
Preference number: 2 (lower is better)
Translates to: SRCCRQSTGHRRQAPGRSAGASE*KQFYLP
Trigger: TGGGAGGTAGAACTGCTTCCATTCTGAGGCCCCAGC...AGACCGCCCGGGTGCCTGGCGCCGATGCCCAGTACTTTGTCTACAGCAACGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp GATTTTGCTGGAGGGCCCACTAGGCTCCCCAGTGCCCAGAATGTTGCTGGCTATCTCAGAGCCTTGGCCTaGCTGGAGCCTGGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: DFAGGPTRLPSAQNVAGYLRALA*LEPGLL
Trigger: CAAGAGGCCAGGCTCCAGCCAGGCCAAGGCTCTGAG...ATAGCCAGCAACATTCTGGGCACTGGGGAGCCTAGTGGGCCCTCCAGCAAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp AACCGGGCCTTGATGCTGGGTGCAAAGAGCCGGGTATCTTCAGCAGCCAGGTTGAGACAGGCCCGAAGGTaGTTTGGGATCCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: NRALMLGAKSRVSSAARLRQARR*FGIPGL
Trigger: CAGCCCTGGGATCCCAAACCACCTTCGGGCCTGTCT...CAACCTGGCTGCTGAAGATACCCGGCTCTTTGCACCCAGCATCAAGGCCCGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp TGGGAACCGGGCCTTGATGCTGGGTGCAAAGAGCCGGGTATCTTCAGCAGCCAGCTGGTGACGGGAACCTaGCTCCAGCTTCATCTCGGT +
Preference number: 2 (lower is better)
Translates to: WEPGLDAGCKEPGIFSSQLVTGT*LQLHLG
Trigger: ACCGAGATGAAGCTGGAGCCAGGTTCCCGTCACCAG...CTGGCTGCTGAAGATACCCGGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp CCAGCCCTGCTGTCCTCACTCGGTCCGCAGCTGCTTCTTTGTCCCCAGCTTTCCGCCCTCACGGTCACATaGTACTTGGTGTTGGGATGC +
Preference number: 2 (lower is better)
Translates to: PALLSSLGPQLLLCPQLSALTVT*YLVLGC
Trigger: GCATCCCAACACCAAGTACCATGTGACCGTGAGGGC...GGAAAGCTGGGGACAAAGAAGCAGCTGCGGACCGAGTGAGGACAGCAGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR CCA 90 bp TTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGTTCTTGCCGGTGAGGTaGAGCGTGGGAGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: FMSGVPAGPRTALKWRSPFLPVR*SVGVRC
Trigger: ACACCTGACTCCCACGCTCCACCTCACCGGCAAGAA...CGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp AAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTTCTTGCCGGTGAGGTaGAGCGTGGGAGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: KCKQSKAVWERIWPGGPRFLPVR*SVGVRC
Trigger: ACACCTGACTCCCACGCTCCACCTCACCGGCAAGAA...CCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp AAGACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGGACGGTGCCAGGGTGTaGTGCTGGGCGGACTGCCAT +
Preference number: 2 (lower is better)
Translates to: KTSPLVTQPPEVALSIGMDGARV*CWADCH
Trigger: ATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTC...CATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CAA 90 bp ATTGGTCCGAACCTGCTTCCACTTCCCTGCAGGTGGAGTGCGAGCTaGCAGGGTGTACTTAGCGATGGGGCTGTGGTTGTCGAAGCCACG +
Preference number: 2 (lower is better)
Translates to: IGPNLLPLPCRWSAS*QGVLSDGAVVVEAT
Trigger: CGTGGCTTCGACAACCACAGCCCCATCGCTAAGTACACCCTGCAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAGGTTCGGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR TCA 90 bp AAAGCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCTTCTTCCTTAGACTaGAGGATGGTGAGGTGTGCA +
Preference number: 2 (lower is better)
Translates to: KAEGAQAPSLRHRGAGSQPSSLD*RMVRCA
Trigger: TGCACACCTCACCATCCTTCAGTCTAAGGAAGAAGG...CTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp CTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCGCTGTCAATCGGGATaGCAGGGTCAGGTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: LFMSGVPAGPRTALKWRSRCQSG*QGQVGS
Trigger: ACTGCCAACCTGACCCTGTCATCCCGATTGACAGCG...ACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp CTCCCTAGGCCCTGGAGAGGTGCCTACAGTTGGTTCCTTTTCCTAGTCCCCAGGCCAGGACACACAGCATaGATGCTGCATTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: LPRPWRGAYSWFLFLVPRPGHTA*MLHSPP
Trigger: GGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGG...CCTGGGGACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR TCA 90 bp CCAAAGTGTCTTGGTCCCCCGCGGGTCTCACAGCCGAAGCGGAGGATGGCCTCCCCTACACTTAGGTATTaGGCACCTGCTCTATACCCA +
Preference number: 2 (lower is better)
Translates to: PKCLGPPRVSQPKRRMASPTLRY*APALYP
Trigger: TGGGTATAGAGCAGGTGCTCAATACCTAAGTGTAGG...GGAGGCCATCCTCCGCTTCGGCTGTGAGACCCGCGGGGGACCAAGACACTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp CTTTTTCTCCGGGGAAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCGGGCTCTTCCTCAGCTaGGTACACGAGTGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: LFLRGNASSPRPSGSGSGGLFLS*VHECSE
Trigger: CTCACTGCACTCGTGTACTCAGCTGAGGAAGAGCCC...GCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTTCCCCGGAGAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp GGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCTCGAGGGAGAAGGCGGCATCATGCTTGTGCCTaGAACCAGCACAAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: GVIGDSVRVLAAARGRRRHHACA*NQHKLS
Trigger: ACTCAGCTTGTGCTGGTTTCAGGCACAAGCATGATG...CCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638577.1
3UTR-3UTR GCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCAAGGATGGTGAGGTGTaGACTTCGCTCCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGKDGEV*TSLQFF
Trigger: GAAGAACTGGAGCGAAGTGCACACCTCACCATCCTT...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp CAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCAGGGTCCTTGCTGCTaGTCGAGGGAGAAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: QCWLRGHRHLGCDYLRPRQGPCC*SREKAG
Trigger: TCCCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTG...CCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp CAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: QCWLRGHRHLGCDYLRPRRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...CCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp GGTGTGCACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGCGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: GVHFAPVLQPVHVWCSCRRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...CCGGCAGGAACACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGTGCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp TACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCAGGAGTGAGTCACGTCAGGGTCCTTGCTaGTGCTCGAGGGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: YQDTQHECCIPLPGRSESRQGPC*CSREKA
Trigger: CGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACG...TGACTCACTCCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp TCTCCGGGGAAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTGCCACATTTATCCTCTaGCCTTCCCAGAAACCTCCC +
Preference number: 2 (lower is better)
Translates to: SPGKCKQSKAVWERIWPGATFIL*PSQKPP
Trigger: GGGAGGTTTCTGGGAAGGGCAGAGGATAAATGTGGC...ACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTTCCCCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR GCA 90 bp TGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCGCCACATTTATCCTCTaGCCTTCCCAGAAACCTCCC +
Preference number: 2 (lower is better)
Translates to: CRQHWRGGRMIGHLLPKPATFIL*PSQKPP
Trigger: GGGAGGTTTCTGGGAAGGGCAGAGGATAAATGTGGC...GGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR GCA 90 bp CGGAGCTTCCGAGGACATATGCCCTTCAAGATGCCTGTCCCGCTGCCCCCTGTGTTTTCTCCGGGGAAATaGAAGCAGTCCAAGGCCGTC +
Preference number: 2 (lower is better)
Translates to: RSFRGHMPFKMPVPLPPVFSPGK*KQSKAV
Trigger: GACGGCCTTGGACTGCTTGCATTTCCCCGGAGAAAA...CACAGGGGGCAGCGGGACAGGCATCTTGAAGGGCATATGTCCTCGGAAGCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR GCA 90 bp CAAGGACCAGAGAGCCAGGGCAAAGGGCTCTGTAAGGGGAGCCCAAATGTATGCTGTGGCTGTTCCTCTTaGCGCCTCCTCTGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: QGPESQGKGLCKGSPNVCCGCSS*RLLWGL
Trigger: CAAGCCCCAGAGGAGGCGGCAAGAGGAACAGCCACA...GCATACATTTGGGCTCCCCTTACAGAGCCCTTTGCCCTGGCTCTCTGGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp CCCGTCCGTCGGGATGAAGTTGGGGAACTCGTTGAGGAGCCAGCGGTAGGACAACGCCAGCCACAAACATaGAGAGAGGATGTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: PVRRDEVGELVEEPAVGQRQPQT*REDVCP
Trigger: GGGACACACATCCTCTCTGCATGTTTGTGGCTGGCG...TTGTCCTACCGCTGGCTCCTCAACGAGTTCCCCAACTTCATCCCGACGGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR GCA 90 bp GGGTCTTGGAGGGGTGGGAGACCCCACCAAGACAAGCCCTTTAGTCACCCAGCCATACCATTCATGTCCTaGTGCACGGGTTCCCAGGTC +
Preference number: 2 (lower is better)
Translates to: GSWRGGRPHQDKPFSHPAIPFMS*CTGSQV
Trigger: GACCTGGGAACCCGTGCAGCAGGACATGAATGGTAT...GGCTGGGTGACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GCCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTGGTGTTGGGATGCAGCACTCGGTCCGCAGCTaGTTCTTTGTCCCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: ASPVVGPHGHMVLGVGMQHSVRS*FFVPSF
Trigger: AAAGCTGGGGACAAAGAAGCAGCTGCGGACCGAGTG...CTGCATCCCAACACCAAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR GCA 90 bp CTGCCTGCGGAAGGACAGCAGGTAGCCGAAGCCGTCTCCGTTCTGGTACTCCCGACCGTGCTTATTCTCTaGCACACACTGGTACATGCC +
Preference number: 2 (lower is better)
Translates to: LPAEGQQVAEAVSVLVLPTVLIL*HTLVHA
Trigger: GGCATGTACCAGTGTGTGGCAGAGAATAAGCACGGT...CGGGAGTACCAGAACGGAGACGGCTTCGGCTACCTGCTGTCCTTCCGCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp GGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACAAGAAAATCCTTGCGTaGGTTCTATCCTGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: GSGSGQVVLGIPGSRQGHKKILA*VLSCGR
Trigger: TCTGCCGCAGGATAGAACCCACGCAAGGATTTTCTT...GTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGGCGTCAGTGTCATCATaGAAGTTACTGCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: RADCRQHWRGGRMIGHLLASVSS*KLLPGA
Trigger: GGCACCAGGCAGTAACTTCCATGATGACACTGACGC...CAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp ACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAGGGTCAGGTTGGCAGAGGACTGCTCTCAAGTaGCGGAGTCCGTATAGGGTC +
Preference number: 2 (lower is better)
Translates to: TQPPEVALSIGMTGSGWQRTALK*RSPYRV
Trigger: GACCCTATACGGACTCCGCCACTTGAGAGCAGTCCT...CTGCCAACCTGACCCTGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp GGTGTGCACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGAGGCGGGAGAGCTCTTaGTCCCAGGGCTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: GVHFAPVLQPVHVWCSCRRRESS*SQGLPF
Trigger: GAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCT...CCGGCAGGAACACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGTGCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCTCTCAACTCTTTTTaGCTCCCACCCCAAACAGCC +
Preference number: 2 (lower is better)
Translates to: RADCRQHWRGGRMIGHLLPLNSF*LPPQTA
Trigger: GGCTGTTTGGGGTGGGAGCCAAAAAGAGTTGAGAGG...CAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp CACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTGGAGGGACGAGGGCATCGTCACCTaGGTTGTGACTATCTCAGAC +
Preference number: 2 (lower is better)
Translates to: HWRGGRMIGHLLPKPWRDEGIVT*VVTISD
Trigger: GTCTGAGATAGTCACAACCCAGGTGACGATGCCCTC...GTCCCTCCAGGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp ACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAGGGTCAGGTTGGCAGTCAGGTTGGCAGTGTTaGCTGAGAGGGCATCGTCAC +
Preference number: 2 (lower is better)
Translates to: TQPPEVALSIGMTGSGWQSGWQC*LRGHRH
Trigger: GTGACGATGCCCTCTCAGCCAACACTGCCAACCTGA...CTGCCAACCTGACCCTGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp CTTTTTCTCCGGGGAAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCGCAGCACTGGAGAGGTaGGCGCATGATTGGCCATCT +
Preference number: 2 (lower is better)
Translates to: LFLRGNASSPRPSGSGSGAALER*AHDWPS
Trigger: AGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGC...GCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTTCCCCGGAGAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp TCTCGCTCCTCCTTGGAGAATTCCTGCAGAAAGCCGAAGCGGAGGATGGCCTCCCTGGTGACGGGAACCTaGCTCCAGCTTCATCTCGGT +
Preference number: 2 (lower is better)
Translates to: SRSSLENSCRKPKRRMASLVTGT*LQLHLG
Trigger: ACCGAGATGAAGCTGGAGCCAGGTTCCCGTCACCAG...GGAGGCCATCCTCCGCTTCGGCTTTCTGCAGGAATTCTCCAAGGAGGAGCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532366.2
3UTR-3UTR CCA 90 bp GTAGGCCCTCACGGTCACATGGTACTTGGTGTTGGGATGCAGGCCGCTGACTCGTGGGTAGTGGGCAGGTaGGTTACAGGGCAACATCAC +
Preference number: 2 (lower is better)
Translates to: VGPHGHMVLGVGMQAADSWVVGR*VTGQHH
Trigger: GTGATGTTGCCCTGTAACCCACCTGCCCACTACCCA...CGAGTCAGCGGCCTGCATCCCAACACCAAGTACCATGTGACCGTGAGGGCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp GTTGTAGCTGCGGATCTTGACCTCAAAGGGCGTGTAGGGCCGGACGCTCTCGTTCGGTCACATGGTACTTaGTGTTGGGATGCAGGCCGC +
Preference number: 2 (lower is better)
Translates to: VVAADLDLKGRVGPDALVRSHGT*CWDAGR
Trigger: GCGGCCTGCATCCCAACACCAAGTACCATGTGACCG...AACGAGAGCGTCCGGCCCTACACGCCCTTTGAGGTCAAGATCCGCAGCTACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CCA 90 bp TTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGGCCCTCACGGTCACATaGTACTTGGTGTTGGGATGC +
Preference number: 2 (lower is better)
Translates to: FMSGVPAGPRTALKWRSPALTVT*YLVLGC
Trigger: GCATCCCAACACCAAGTACCATGTGACCGTGAGGGC...CGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCATCTCTGCTGCCCTCACGGTCACATaGTACTTGGTGTTGGGATGC +
Preference number: 2 (lower is better)
Translates to: GLLSSGGVRIGSQRAISAALTVT*YLVLGC
Trigger: GCATCCCAACACCAAGTACCATGTGACCGTGAGGGC...AGCAGAGATGGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp TGGGAACCGGGCCTTGATGCTGGGTGCAAAGAGCCGGGTATCTTCAGCAGCCAGGCCCTCACGGTCACATaGTACTTGGTGTTGGGATGC +
Preference number: 2 (lower is better)
Translates to: WEPGLDAGCKEPGIFSSQALTVT*YLVLGC
Trigger: GCATCCCAACACCAAGTACCATGTGACCGTGAGGGC...CTGGCTGCTGAAGATACCCGGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp CATCATGCTTGTGCCTCCATTCCTCACGATGTGGACTTCTGCAGGGATCCCATCGACGGTGCCAGGGTGTaGTGCTGGGCGGACTGCCAT +
Preference number: 2 (lower is better)
Translates to: HHACASIPHDVDFCRDPIDGARV*CWADCH
Trigger: ATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTC...GATGGGATCCCTGCAGAAGTCCACATCGTGAGGAATGGAGGCACAAGCATGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GGTGTGCACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGACCTCCTGGGGGACCTaGCGGACAGAGGCTGTCACA +
Preference number: 2 (lower is better)
Translates to: GVHFAPVLQPVHVWCSCRTSWGT*RTEAVT
Trigger: TGTGACAGCCTCTGTCCGCCAGGTCCCCCAGGAGGT...CCGGCAGGAACACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGTGCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR CAA 90 bp CACCCAGGGAGACAGAGCACCACTGTCATGCCAGTGGCCACAGGTTaGAGGATACTGTGTCTCCCACCAATGAGCCAGTTGGCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: HPGRQSTTVMPVATG*RILCLPPMSQLAVP
Trigger: TGGGACTGCCAACTGGCTCATTGGTGGGAGACACAGTATCCTCAAACCTGTGGCCACTGGCATGACAGTGGTGCTCTGTCTCCCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR TCA 90 bp CGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCTTCTTCCTTAGACTaGAGGATGGTGAGGTGTGCA +
Preference number: 2 (lower is better)
Translates to: RADCRQHWRGGRMIGHLLPSSLD*RMVRCA
Trigger: TGCACACCTCACCATCCTTCAGTCTAAGGAAGAAGG...CAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp GGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCATCTCTGCTTCGTCACCTGGGTTGTaGCTATCTCAGACCAAGGCT +
Preference number: 2 (lower is better)
Translates to: GLLSSGGVRIGSQRAISASSPGL*LSQTKA
Trigger: AGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGA...AGCAGAGATGGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp TCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCATTTTCACACCCTACTaGCTAATCACCTTCTTAGCC +
Preference number: 2 (lower is better)
Translates to: SGHLGSRKGLAVSVGGGVIFTPY*LITFLA
Trigger: GGCTAAGAAGGTGATTAGTCAGTAGGGTGTGAAAAT...GACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000640326.1
3UTR-3UTR GCA 90 bp GAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: EGAQAPSLRHRGAGSQPLHHGSY*LVPLNL
Trigger: TAAATTGAGAGGCACCAGGCAGTAACTTCCATGATG...AAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp TTCCTCACGATGTGGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTGGTCAAGGATGGTGAGGTGTaGACTTCGCTCCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: FLTMWTSAGIPSPPGPVVKDGEV*TSLQFF
Trigger: GAAGAACTGGAGCGAAGTGCACACCTCACCATCCTT...GACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCACATCGTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp AGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCACAGGGTCCTTGCTGCTaGTCGAGGGAGAAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: SSSTCSCLVFLPGLGLLSQGPCC*SREKAG
Trigger: TCCCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTG...TGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGTTGAAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp ACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACACAGCGTCAGGGTCCTTaGTGCTGCTCGAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: TSPLVTQPPEVALSIGMTQRQGP*CCSREK
Trigger: CTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTG...TGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp TACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCAGGAGTGAGTCATCAGACCAAGGCTGGTaGCCCTTTCCACCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: YQDTQHECCIPLPGRSESSDQGW*PFPPRA
Trigger: GGCCCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGA...TGACTCACTCCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR GCA 90 bp AACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGGACACACAGCATGAATaGTGCATTCCCCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: NLFMSGVPAGPRTALKWRDTQHE*CIPLPG
Trigger: GCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTC...CCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp CCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAGGGTCATACTTGGTGTTGGGATaGAGGCCGCTGACTCGGGCA +
Preference number: 2 (lower is better)
Translates to: PLVTQPPEVALSIGMTGSYLVLG*RPLTRA
Trigger: TGCCCGAGTCAGCGGCCTGCATCCCAACACCAAGTA...TGACCCTGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp ATTTTGCTGGAGGGCCCACTAGGCTCCCCAGTGCCCAGAATGTTGCTGGCTATGTACTTGGTGTTGGGATaGAGGCCGCTGACTCGGGCA +
Preference number: 2 (lower is better)
Translates to: ILLEGPLGSPVPRMLLAMYLVLG*RPLTRA
Trigger: TGCCCGAGTCAGCGGCCTGCATCCCAACACCAAGTA...CATAGCCAGCAACATTCTGGGCACTGGGGAGCCTAGTGGGCCCTCCAGCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR GCA 90 bp GTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCTCGAGGGAGAAGGCGGGAGCTTATAGCCGGTGACTaGAGACTCATTTCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VIGDSVRVLAAARGRRRELIAGD*RLISER
Trigger: CCTTTCCGAAATGAGTCTGCAGTCACCGGCTATAAG...CTCCCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGTCCCCGATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp AGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCTGTTCTCCACCATCATaGTTGTGCCTCCATTCCTCA +
Preference number: 2 (lower is better)
Translates to: RQEPLGSYRGQRQGPCCCCSPPS*LCLHSS
Trigger: TGAGGAATGGAGGCACAAGCATGATGGTGGAGAACA...GCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp CATCATGCTTGTGCCTCCATTCCTCACGATGTGGACTTCTGCAGGGATCCCATCGGTGCCAGGGTGTGGTaGTGGGCGGACTGCCATGTT +
Preference number: 2 (lower is better)
Translates to: HHACASIPHDVDFCRDPIGARVW*WADCHV
Trigger: AACATGGCAGTCCGCCCAGCACCACACCCTGGCACC...GATGGGATCCCTGCAGAAGTCCACATCGTGAGGAATGGAGGCACAAGCATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CCTATGAGGATCAGCATCGCCACGGAGTGGGAAATGACGGTGCCAGGGTGTGGTAAACCAGCCACTCTCTaGCACAGTGTCAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: PMRISIATEWEMTVPGCGKPATL*HSVRPP
Trigger: AGGTGGCCTGACACTGTGCCAGAGAGTGGCTGGTTT...ACCACACCCTGGCACCGTCATTTCCCACTCCGTGGCGATGCTGATCCTCATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAGAAAATCCTTGCGTaGGTTCTATCCTGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: ADCRQHWRGGRMIGHLLPKKILA*VLSCGR
Trigger: TCTGCCGCAGGATAGAACCCACGCAAGGATTTTCTT...GGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGAAGAAAATCCTTGCGTaGGTTCTATCCTGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: VWERIWPGGPRYTWEQAGKKILA*VLSCGR
Trigger: TCTGCCGCAGGATAGAACCCACGCAAGGATTTTCTT...CCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp AGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCAAGAAAATCCTTGCGTaGGTTCTATCCTGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: RQEPLGSYRGQRQGPCCCKKILA*VLSCGR
Trigger: TCTGCCGCAGGATAGAACCCACGCAAGGATTTTCTT...GCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp AGCAGTCCAAGGCCGTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTCCTCTCAACTCTTTTTaGCTCCCACCCCAAACAGCC +
Preference number: 2 (lower is better)
Translates to: SSPRPSGSGSGQVVLGIPPLNSF*LPPQTA
Trigger: GGCTGTTTGGGGTGGGAGCCAAAAAGAGTTGAGAGG...AGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp GGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCATCTCTGCTGAGGGCATCGTCACCTaGGTTGTGACTATCTCAGAC +
Preference number: 2 (lower is better)
Translates to: GLLSSGGVRIGSQRAISAEGIVT*VVTISD
Trigger: GTCTGAGATAGTCACAACCCAGGTGACGATGCCCTC...AGCAGAGATGGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAAGCTCCTGCCCAAACCCTaGAGGGACTGTGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: RHLGCDYLRPRLVPLSTKLLPKP*RDCAEW
Trigger: CCATTCTGCACAGTCCCTCCAGGGTTTGGGCAGGAG...CTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp CACACCTTGGACGGGAACCCAGCCATGCCAATCCCCATGATCACCAATCCGAACAGGTGGGCGCATGATTaGCCATCTCCTGCCCAAACC +
Preference number: 2 (lower is better)
Translates to: HTLDGNPAMPIPMITNPNRWAHD*PSPAQT
Trigger: GGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCT...GTTCGGATTGGTGATCATGGGGATTGGCATGGCTGGGTTCCCGTCCAAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CCA 90 bp CACACCTTGGACGGGAACCCAGCCATGCCAATCCCCATGATCACCAATCCGAACGGTCCTAGGTATACCTaGGAGCAGGCAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: HTLDGNPAMPIPMITNPNGPRYT*EQAGPH
Trigger: ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACC...GTTCGGATTGGTGATCATGGGGATTGGCATGGCTGGGTTCCCGTCCAAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CCA 90 bp CGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAAGGGTCCTAGGTATACCTaGGAGCAGGCAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: RHLGCDYLRPRLVPLSTKGPRYT*EQAGPH
Trigger: ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACC...CTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp GTAGACCCCGGCATCCTGTGCCTTGGTGGGGTTCATGATGACCAGGTTGCCCCCGAGGATGTGTGTCCCTaGAGCCTAATACCCTTACTG +
Preference number: 2 (lower is better)
Translates to: VDPGILCLGGVHDDQVAPEDVCP*SLIPLL
Trigger: CAGTAAGGGTATTAGGCTCCAGGGACACACATCCTC...GGGGGCAACCTGGTCATCATGAACCCCACCAAGGCACAGGATGCCGGGGTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CAA 90 bp TCCCACTTAATGCTAAGACTAGAGCTTGAGAAAGTCCAGGAGATGTaGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTG +
Preference number: 2 (lower is better)
Translates to: SHLMLRLELEKVQEM*PGGRRGGGFMVVAL
Trigger: CAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACATCTCCTGGACTTTCTCAAGCTCTAGTCTTAGCATTAAGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR CAA 90 bp GACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTGGTCCGAATTaGTACCAGGGCATGGCCAATGTCTTCAGGCACTGGGATTTCTAT +
Preference number: 2 (lower is better)
Translates to: DFCRDPIPSGPCGPN*YQGMANVFRHWDFY
Trigger: ATAGAAATCCCAGTGCCTGAAGACATTGGCCATGCCCTGGTACAAATTCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp GAAACCTCCCAATACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCCGCTGTCAATCGGGATaGCAGGGTCAGGTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: ETSQYQDTQHECCIPLPGRCQSG*QGQVGS
Trigger: ACTGCCAACCTGACCCTGTCATCCCGATTGACAGCG...GCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTATTGGGAGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR TCA 90 bp CAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCCAGGACACACAGCATaGATGCTGCATTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QCWLRGHRHLGCDYLRPRPGHTA*MLHSPP
Trigger: GGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGG...CCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR TCA 90 bp TCTCATACCCCAGGAGGATACCATTCATGTCCTGCTGCACGGGTTCCCAGGTCAGGGCTCTTCCTCAGCTaGGTACACGAGTGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: SHTPGGYHSCPAARVPRSGLFLS*VHECSE
Trigger: CTCACTGCACTCGTGTACTCAGCTGAGGAAGAGCCC...TGACCTGGGAACCCGTGCAGCAGGACATGAATGGTATCCTCCTGGGGTATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR TCA 90 bp GCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTGCTAAGACTAGAGCTTaGGAAAGTCCAGGAGATGTT +
Preference number: 2 (lower is better)
Translates to: AGRPSASPVVGPHGHMVLAKTRA*ESPGDV
Trigger: AACATCTCCTGGACTTTCTCAAGCTCTAGTCTTAGC...AAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR GCA 90 bp AGCCGCTTGGGCAGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: SRLGRQEPLGSYRGQRQGHHGSY*LVPLNL
Trigger: TAAATTGAGAGGCACCAGGCAGTAACTTCCATGATG...ACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCTGCCCAAGCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp AGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACATTAAGGATGGTGAGGTGTaGACTTCGCTCCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: SGSGQVVLGIPGSRQGHIKDGEV*TSLQFF
Trigger: GAAGAACTGGAGCGAAGTGCACACCTCACCATCCTT...AATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp GTGCAGAATGGGTCTTGGAGGGGTGGGAGACCCCACCAAGACAAGCCCTTTAGTATCTCAGACCAAGGCTaGTGCCCCTTTCCACCAAGG +
Preference number: 2 (lower is better)
Translates to: VQNGSWRGGRPHQDKPFSISDQG*CPFPPR
Trigger: CCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGAT...ACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACCCATTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp CGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAAGTCAGGTTGGCAGTGTTaGCTGAGAGGGCATCGTCAC +
Preference number: 2 (lower is better)
Translates to: RHLGCDYLRPRLVPLSTKSGWQC*LRGHRH
Trigger: GTGACGATGCCCTCTCAGCCAACACTGCCAACCTGA...CTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp TACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCAGGAGTGAGTCACTCCTGCCCAAACCCTaGAGGGACTGTGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: YQDTQHECCIPLPGRSESLLPKP*RDCAEW
Trigger: CCATTCTGCACAGTCCCTCCAGGGTTTGGGCAGGAG...TGACTCACTCCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp GGTGTGCACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGGGTCCTAGGTATACCTaGGAGCAGGCAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: GVHFAPVLQPVHVWCSCRGPRYT*EQAGPH
Trigger: ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACC...CCGGCAGGAACACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGTGCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp CAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGGGTCCTAGGTATACCTaGGAGCAGGCAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: QCWLRGHRHLGCDYLRPRGPRYT*EQAGPH
Trigger: ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACC...CCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp CCTGCGAGCCCCTCCCCGACTCATCCTTCACGGAGAAGCAGCAGTTCACTAAGGCTCTATACCCAGCACTaGGCTAGAGACTGGCTTGTA +
Preference number: 2 (lower is better)
Translates to: PASPSPTHPSRRSSSSLRLYTQH*ARDWLV
Trigger: TACAAGCCAGTCTCTAGCCCAGTGCTGGGTATAGAG...CCTTAGTGAACTGCTGCTTCTCCGTGAAGGATGAGTCGGGGAGGGGCTCGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp GATGAAGTTGGGGAACTCGTTGAGGAGCCAGCGGTAGGACAAGCCTGGGTAGTGACACCTGCTCCTCCGTaGACTCCTCTGGGAATAGCA +
Preference number: 2 (lower is better)
Translates to: DEVGELVEEPAVGQAWVVTPAPP*TPLGIA
Trigger: TGCTATTCCCAGAGGAGTCCACGGAGGAGCAGGTGT...CACTACCCAGGCTTGTCCTACCGCTGGCTCCTCAACGAGTTCCCCAACTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CCA 90 bp GGTGTGCACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGCGGTCACATGGTACTTaGTGTTGGGATGCAGGCCGC +
Preference number: 2 (lower is better)
Translates to: GVHFAPVLQPVHVWCSCRRSHGT*CWDAGR
Trigger: GCGGCCTGCATCCCAACACCAAGTACCATGTGACCG...CCGGCAGGAACACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGTGCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CAA 90 bp AGTCAGCCCTCCATGTTGAAGTTTGGTAGAAGCTCTGCCCACACCTaGGACGGGAACCCAGCCATGCCAATCCCCATGATCACCAATCCG +
Preference number: 2 (lower is better)
Translates to: SQPSMLKFGRSSAHT*DGNPAMPIPMITNP
Trigger: CGGATTGGTGATCATGGGGATTGGCATGGCTGGGTTCCCGTCCAAGGTGTGGGCAGAGCTTCTACCAAACTTCAACATGGAGGGCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR CAA 90 bp GGGTCGTGGGAGGCATGGCACTGTAGGGTCAGGTTGTCACCCAAGTaGATGTCGGCACTTGAGGGGGCTAGAGTGATTTTGGTTGCATCT +
Preference number: 2 (lower is better)
Translates to: GSWEAWHCRVRLSPK*MSALEGARVILVAS
Trigger: AGATGCAACCAAAATCACTCTAGCCCCCTCAAGTGCCGACATCAACTTGGGTGACAACCTGACCCTACAGTGCCATGCCTCCCACGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp CTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCTTCTTCCTTAGACTaGAGGATGGTGAGGTGTGCA +
Preference number: 2 (lower is better)
Translates to: LFMSGVPAGPRTALKWRSPSSLD*RMVRCA
Trigger: TGCACACCTCACCATCCTTCAGTCTAAGGAAGAAGG...ACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR TCA 90 bp CAATACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCAGGAGTGAGCCATGCCAATCCCCATaGTCACCAATCCGAACCCCT +
Preference number: 2 (lower is better)
Translates to: QYQDTQHECCIPLPGRSEPCQSP*SPIRTP
Trigger: AGGGGTTCGGATTGGTGATCATGGGGATTGGCATGG...CTCACTCCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR TCA 90 bp CAGGGGGTGAGGCCCAGCACCTGTGCAGTCTCGGCATTGCCCTCGATGTTTGCAGCTAAGACTAGAGCTTaGGAAAGTCCAGGAGATGTT +
Preference number: 2 (lower is better)
Translates to: QGVRPSTCAVSALPSMFAAKTRA*ESPGDV
Trigger: AACATCTCCTGGACTTTCTCAAGCTCTAGTCTTAGC...TGCAAACATCGAGGGCAATGCCGAGACTGCACAGGTGCTGGGCCTCACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR GCA 90 bp GAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCTCGAGGTTTAAAGAAAATCCTTaGGTGGGTTCTATCCTGCGG +
Preference number: 2 (lower is better)
Translates to: EPLGSYRGQRQGPCCCSRFKENP*VGSILR
Trigger: CCGCAGGATAGAACCCACGCAAGGATTTTCTTTAAA...CCTCGAGCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: GRADCRQHWRGGRMIGHLHHGSY*LVPLNL
Trigger: TAAATTGAGAGGCACCAGGCAGTAACTTCCATGATG...GAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GCCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTGGTGTTGGGATGCAGTGGCCTCTTGGGCTGTaGTGTCCAGTAAAACTTTCT +
Preference number: 2 (lower is better)
Translates to: ASPVVGPHGHMVLGVGMQWPLGL*CPVKLS
Trigger: AGAAAGTTTTACTGGACAGCACAGCCCAAGAGGCCA...CTGCATCCCAACACCAAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp ACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGAAACCAGCCACTCTCTaGCACAGTGTCAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: TSLQFFNLFMSGVPAGPRKPATL*HSVRPP
Trigger: AGGTGGCCTGACACTGTGCCAGAGAGTGGCTGGTTT...CCTAGGCCCGGCAGGAACACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp ACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAAGGACTGCTCTCAAGTaGCGGAGTCCGTATAGGGTC +
Preference number: 2 (lower is better)
Translates to: TSPLVTQPPEVALSIGMTRTALK*RSPYRV
Trigger: GACCCTATACGGACTCCGCCACTTGAGAGCAGTCCT...TGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp AAGACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGAGGACTGCTCTCAAGTaGCGGAGTCCGTATAGGGTC +
Preference number: 2 (lower is better)
Translates to: KTSPLVTQPPEVALSIGMRTALK*RSPYRV
Trigger: GACCCTATACGGACTCCGCCACTTGAGAGCAGTCCT...CATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CCA 90 bp TACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCAGGAGTGAGTCAATCTCAGACCAAGGCTaGTGCCCCTTTCCACCAAGG +
Preference number: 2 (lower is better)
Translates to: YQDTQHECCIPLPGRSESISDQG*CPFPPR
Trigger: CCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGAT...TGACTCACTCCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp ACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAATCTCAGACCAAGGCTaGTGCCCCTTTCCACCAAGG +
Preference number: 2 (lower is better)
Translates to: TSPLVTQPPEVALSIGMTISDQG*CPFPPR
Trigger: CCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGAT...TGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp CAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGTCAGGTTGGCAGTGTTaGCTGAGAGGGCATCGTCAC +
Preference number: 2 (lower is better)
Translates to: QCWLRGHRHLGCDYLRPRSGWQC*LRGHRH
Trigger: GTGACGATGCCCTCTCAGCCAACACTGCCAACCTGA...CCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CCA 90 bp CAAGGACCAGAGAGCCAGGGCAAAGGGCTCTGTAAGGGGAGCCCAAATGTATGCTCGGAGCATGGGCTTTaGGGTTTCCTAGTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: QGPESQGKGLCKGSPNVCSEHGL*GFLVVL
Trigger: CAGCACAACTAGGAAACCCCAAAGCCCATGCTCCGA...GCATACATTTGGGCTCCCCTTACAGAGCCCTTTGCCCTGGCTCTCTGGTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp TGTATCCCATCTAAGGGCACTAAGTGTCATAGGCCCCAAAGGCTGCCTGGGGCTGCTAAAAACCCTTCGTaGGTCTCCCAGGAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: CIPSKGTKCHRPQRLPGAAKNPS*VSQEVC
Trigger: GCAGACCTCCTGGGAGACCCACGAAGGGTTTTTAGC...AGCCCCAGGCAGCCTTTGGGGCCTATGACACTTAGTGCCCTTAGATGGGATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp AGAAGTCCATGTGGCTGGTGGCCAAACAGGAGTAGTTGCCCAGGTCTGAGGCATGAATTCCTGCAGAACTaGAGGCAGAGACCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: RSPCGWWPNRSSCPGLRHEFLQN*RQRPGA
Trigger: AGCCCCTGGTCTCTGCCTCCAGTTCTGCAGGAATTC...ATGCCTCAGACCTGGGCAACTACTCCTGTTTGGCCACCAGCCACATGGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp TACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCAGGAGTGAGTCATCGTCACCTGGGTTGTaGCTATCTCAGACCAAGGCT +
Preference number: 2 (lower is better)
Translates to: YQDTQHECCIPLPGRSESSSPGL*LSQTKA
Trigger: AGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGA...TGACTCACTCCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR TCA 90 bp CCTGCGAGCCCCTCCCCGACTCATCCTTCACGGAGAAGCAGCAGTTCACTAAGGAGGGAGACAGGAAATTaGCAGTGCAAGGTAGCAAAT +
Preference number: 2 (lower is better)
Translates to: PASPSPTHPSRRSSSSLRRETGN*QCKVAN
Trigger: ATTTGCTACCTTGCACTGTCAATTTCCTGTCTCCCT...CCTTAGTGAACTGCTGCTTCTCCGTGAAGGATGAGTCGGGGAGGGGCTCGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp TGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: CRQHWRGGRMIGHLLPKPHHGSY*LVPLNL
Trigger: TAAATTGAGAGGCACCAGGCAGTAACTTCCATGATG...GGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp CCTGTCTTCCCAAAGCCTATGACCATATACACAAGTCCACGGGTGTTCCGCAGCGACACACAGCATGAATaGTGCATTCCCCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: PVFPKPMTIYTSPRVFRSDTQHE*CIPLPG
Trigger: GCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTC...GCTGCGGAACACCCGTGGACTTGTGTATATGGTCATAGGCTTTGGGAAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp ATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAATACCATTCATGTCCTaGTGCACGGGTTCCCAGGTC +
Preference number: 2 (lower is better)
Translates to: IVTWVVTISDQGWCPFPPIPFMS*CTGSQV
Trigger: GACCTGGGAACCCGTGCAGCAGGACATGAATGGTAT...TGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp ACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGGCGTCAGTGTCATCATaGAAGTTACTGCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: TSLQFFNLFMSGVPAGPRASVSS*KLLPGA
Trigger: GGCACCAGGCAGTAACTTCCATGATGACACTGACGC...CCTAGGCCCGGCAGGAACACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GGTGTGCACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGGCGTCAGTGTCATCATaGAAGTTACTGCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: GVHFAPVLQPVHVWCSCRASVSS*KLLPGA
Trigger: GGCACCAGGCAGTAACTTCCATGATGACACTGACGC...CCGGCAGGAACACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGTGCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CATCATGCTTGTGCCTCCATTCCTCACGATGTGGACTTCTGCAGGGATCCCATCTCAGGTTGGCAGTGTTaGCTGAGAGGGCATCGTCAC +
Preference number: 2 (lower is better)
Translates to: HHACASIPHDVDFCRDPISGWQC*LRGHRH
Trigger: GTGACGATGCCCTCTCAGCCAACACTGCCAACCTGA...GATGGGATCCCTGCAGAAGTCCACATCGTGAGGAATGGAGGCACAAGCATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CGTCCTGTCTTCCCAAAGCCTATGACCATATACACAAGTCCACGGGTGTTCCGCCCCCAGGGTGTTTACTaGCCACTAAGCTGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: RPVFPKPMTIYTSPRVFRPQGVY*PLSCGV
Trigger: TACCCCACAGCTTAGTGGCCAGTAAACACCCTGGGG...GCGGAACACCCGTGGACTTGTGTATATGGTCATAGGCTTTGGGAAGACAGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp GTTGGAGGCCAGGCACTGGTAGACCCCGGCATCCTGTGCCTTGGTGGGGTTCATCACTGGGCTAGAGACTaGCTTGTAAAGATGATTAAG +
Preference number: 2 (lower is better)
Translates to: VGGQALVDPGILCLGGVHHWARD*LVKMIK
Trigger: CTTAATCATCTTTACAAGCCAGTCTCTAGCCCAGTG...ATGAACCCCACCAAGGCACAGGATGCCGGGGTCTACCAGTGCCTGGCCTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR TCA 90 bp ATTCTAAGAGTCTCATCTCTGGATGGACACTTGGACCATCTCCTGCCCCTCCAGGAATGGTCGTATAGCTaGGCCCCTAGCACCCTTGCT +
Preference number: 2 (lower is better)
Translates to: ILRVSSLDGHLDHLLPLQEWSYS*APSTLA
Trigger: AGCAAGGGTGCTAGGGGCTCAGCTATACGACCATTC...CTGGAGGGGCAGGAGATGGTCCAAGTGTCCATCCAGAGATGAGACTCTTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR TCA 90 bp GGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCGCTAAGACTAGAGCTTaGGAAAGTCCAGGAGATGTT +
Preference number: 2 (lower is better)
Translates to: GHRHLGCDYLRPRLVPLSAKTRA*ESPGDV
Trigger: AACATCTCCTGGACTTTCTCAAGCTCTAGTCTTAGC...GGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp CCTAGGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCATCTCTTTAAAGAAAATCCTTaGGTGGGTTCTATCCTGCGG +
Preference number: 2 (lower is better)
Translates to: PRTALKWRSPYRVPEGHLFKENP*VGSILR
Trigger: CCGCAGGATAGAACCCACGCAAGGATTTTCTTTAAA...GAGATGGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp ACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAAAGGATGGTGAGGTGTaGACTTCGCTCCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: TSPLVTQPPEVALSIGMTKDGEV*TSLQFF
Trigger: GAAGAACTGGAGCGAAGTGCACACCTCACCATCCTT...TGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR GCA 90 bp TCGGCACTTGAGGGGGCTAGAGTGATTTTGGTTGCATCTCGCACAGATAGGATTCATGCCAGCAACACCTaGTCCTCCGTGGACTCCTCT +
Preference number: 2 (lower is better)
Translates to: SALEGARVILVASRTDRIHASNT*SSVDSS
Trigger: AGAGGAGTCCACGGAGGAGCAGGTGTTGCTGGCATG...AATCCTATCTGTGCGAGATGCAACCAAAATCACTCTAGCCCCCTCAAGTGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp AAACCTCCCAATACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCAATACCATTCATGTCCTaGTGCACGGGTTCCCAGGTC +
Preference number: 2 (lower is better)
Translates to: KPPNTRTHSMNAAFPSQAIPFMS*CTGSQV
Trigger: GACCTGGGAACCCGTGCAGCAGGACATGAATGGTAT...TGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTATTGGGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GTGCAGAATGGGTCTTGGAGGGGTGGGAGACCCCACCAAGACAAGCCCTTTAGTCTTATAGCCGGTGACTaGAGACTCATTTCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VQNGSWRGGRPHQDKPFSLIAGD*RLISER
Trigger: CCTTTCCGAAATGAGTCTGCAGTCACCGGCTATAAG...ACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACCCATTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp AGTTCTTCAACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAGCGTCAGTGTCATCATaGAAGTTACTGCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: SSSTCSCLVFLPGLGLLSASVSS*KLLPGA
Trigger: GGCACCAGGCAGTAACTTCCATGATGACACTGACGC...TGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGTTGAAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CCTTCCCAGAAACCTCCCAATACCAGGACACACAGCATGAATGCTGCATTCCCCGCGTCAGTGTCATCATaGAAGTTACTGCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: PSQKPPNTRTHSMNAAFPASVSS*KLLPGA
Trigger: GGCACCAGGCAGTAACTTCCATGATGACACTGACGC...GGGGAATGCAGCATTCATGCTGTGTGTCCTGGTATTGGGAGGTTTCTGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp CCAGTCACAGCTTCACCTTTCCCAAATCCCATGTCAACAGCTGTCAAAATTCCTAGGCGGGAGAGCTCTTaGTCCCAGGGCTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PVTASPFPNPMSTAVKIPRRESS*SQGLPF
Trigger: GAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCT...AGGAATTTTGACAGCTGTTGACATGGGATTTGGGAAAGGTGAAGCTGTGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp ATTTTGCTGGAGGGCCCACTAGGCTCCCCAGTGCCCAGAATGTTGCTGGCTATGAGAAGAACTGATCTGTaGGGTGTGAGGTGCATGAGA +
Preference number: 2 (lower is better)
Translates to: ILLEGPLGSPVPRMLLAMRRTDL*GVRCMR
Trigger: TCTCATGCACCTCACACCCCACAGATCAGTTCTTCT...CATAGCCAGCAACATTCTGGGCACTGGGGAGCCTAGTGGGCCCTCCAGCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp TCGGCACTTGAGGGGGCTAGAGTGATTTTGGTTGCATCTCGCACAGATAGGATTAGCACACTGAGGGGCTaGTCTTCAAAGACAGGCCCG +
Preference number: 2 (lower is better)
Translates to: SALEGARVILVASRTDRISTLRG*SSKTGP
Trigger: CGGGCCTGTCTTTGAAGACCAGCCCCTCAGTGTGCT...AATCCTATCTGTGCGAGATGCAACCAAAATCACTCTAGCCCCCTCAAGTGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp TCCTTGCGTGGGTTCTATCCTGCGGCAGAATATAAAATATCCTACCTCCTACAAGGAGAGGTGGGCGCATaGTTGGCCATCTCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SLRGFYPAAEYKISYLLQGEVGA*LAISCP
Trigger: TGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCC...TTGTAGGAGGTAGGATATTTTATATTCTGCCGCAGGATAGAACCCACGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp CTCCCTAGGCCCTGGAGAGGTGCCTACAGTTGGTTCCTTTTCCTAGTCCCCAGGATTTTCACACCCTACTaGCTAATCACCTTCTTAGCC +
Preference number: 2 (lower is better)
Translates to: LPRPWRGAYSWFLFLVPRIFTPY*LITFLA
Trigger: GGCTAAGAAGGTGATTAGTCAGTAGGGTGTGAAAAT...CCTGGGGACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR TCA 90 bp CCTGTCTTCCCAAAGCCTATGACCATATACACAAGTCCACGGGTGTTCCGCAGCACCAGAATTCCTAGATaGGCCCCCTTAATGGCTTCC +
Preference number: 2 (lower is better)
Translates to: PVFPKPMTIYTSPRVFRSTRIPR*APLMAS
Trigger: GGAAGCCATTAAGGGGGCTCATCTAGGAATTCTGGT...GCTGCGGAACACCCGTGGACTTGTGTATATGGTCATAGGCTTTGGGAAGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp CTCCCTAGGCCCTGGAGAGGTGCCTACAGTTGGTTCCTTTTCCTAGTCCCCAGGTTTAAAGAAAATCCTTaGGTGGGTTCTATCCTGCGG +
Preference number: 2 (lower is better)
Translates to: LPRPWRGAYSWFLFLVPRFKENP*VGSILR
Trigger: CCGCAGGATAGAACCCACGCAAGGATTTTCTTTAAA...CCTGGGGACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp ACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGATTTAAAGAAAATCCTTaGGTGGGTTCTATCCTGCGG +
Preference number: 2 (lower is better)
Translates to: TCSCLVFLPGLGLLSSGGFKENP*VGSILR
Trigger: CCGCAGGATAGAACCCACGCAAGGATTTTCTTTAAA...TCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp AGGTTTGAGGATACTGTGTCTCCCACCAATGAGCCAGTTGGCAGTCCCATTCTGGCCACATTTATCCTCTaGCCTTCCCAGAAACCTCCC +
Preference number: 2 (lower is better)
Translates to: RFEDTVSPTNEPVGSPILATFIL*PSQKPP
Trigger: GGGAGGTTTCTGGGAAGGGCAGAGGATAAATGTGGC...CAGAATGGGACTGCCAACTGGCTCATTGGTGGGAGACACAGTATCCTCAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp CCCGTCCGTCGGGATGAAGTTGGGGAACTCGTTGAGGAGCCAGCGGTAGGACAAGTGCAAGGTAGCAAATaGCATAAAGTTCAAGATGCT +
Preference number: 2 (lower is better)
Translates to: PVRRDEVGELVEEPAVGQVQGSK*HKVQDA
Trigger: AGCATCTTGAACTTTATGGCATTTGCTACCTTGCAC...TTGTCCTACCGCTGGCTCCTCAACGAGTTCCCCAACTTCATCCCGACGGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR GCA 90 bp TCTCATACCCCAGGAGGATACCATTCATGTCCTGCTGCACGGGTTCCCAGGTCATGTTCTCCACCATCATaGTTGTGCCTCCATTCCTCA +
Preference number: 2 (lower is better)
Translates to: SHTPGGYHSCPAARVPRSCSPPS*LCLHSS
Trigger: TGAGGAATGGAGGCACAAGCATGATGGTGGAGAACA...TGACCTGGGAACCCGTGCAGCAGGACATGAATGGTATCCTCCTGGGGTATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp ATTCTAAGAGTCTCATCTCTGGATGGACACTTGGACCATCTCCTGCCCCTCCAGCCTCTCAACTCTTTTTaGCTCCCACCCCAAACAGCC +
Preference number: 2 (lower is better)
Translates to: ILRVSSLDGHLDHLLPLQPLNSF*LPPQTA
Trigger: GGCTGTTTGGGGTGGGAGCCAAAAAGAGTTGAGAGG...CTGGAGGGGCAGGAGATGGTCCAAGTGTCCATCCAGAGATGAGACTCTTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp CAAGTCACTCTAGCAGGAGGCTGTTGCATTTTACAAGCTTGCATGTCCTCAGGTAGGTGGGCGCATGATTaGCCATCTCCTGCCCAAACC +
Preference number: 2 (lower is better)
Translates to: QVTLAGGCCILQACMSSGRWAHD*PSPAQT
Trigger: GGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCT...ACCTGAGGACATGCAAGCTTGTAAAATGCAACAGCCTCCTGCTAGAGTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp GTAGGCCCTCACGGTCACATGGTACTTGGTGTTGGGATGCAGGCCGCTGACTCGAATGTCTTCAGGCACTaGGATTTCTATCCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: VGPHGHMVLGVGMQAADSNVFRH*DFYPVL
Trigger: AAGAACTGGATAGAAATCCCAGTGCCTGAAGACATT...CGAGTCAGCGGCCTGCATCCCAACACCAAGTACCATGTGACCGTGAGGGCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CAA 90 bp GGGCCACAGAAGGTGGGATCTCCAAGACTTCCTGGGCTGAACACTTaGATTCTAAGAGTCTCATCTCTGGATGGACACTTGGACCATCTC +
Preference number: 2 (lower is better)
Translates to: GPQKVGSPRLPGLNT*ILRVSSLDGHLDHL
Trigger: GAGATGGTCCAAGTGTCCATCCAGAGATGAGACTCTTAGAATCAAAGTGTTCAGCCCAGGAAGTCTTGGAGATCCCACCTTCTGTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR TCA 90 bp CCAACTGATTCTAGCCAAATGCCTGCCTGTGCTCTGCTTGGACCTGCCTTAAGAACCAGAATTCCTAGATaGGCCCCCTTAATGGCTTCC +
Preference number: 2 (lower is better)
Translates to: PTDSSQMPACALLGPALRTRIPR*APLMAS
Trigger: GGAAGCCATTAAGGGGGCTCATCTAGGAATTCTGGT...TCTTAAGGCAGGTCCAAGCAGAGCACAGGCAGGCATTTGGCTAGAATCAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331830.7
3UTR-3UTR GCA 90 bp CACACAGAAAAATGCCCACCTAATGCCTTTTATGCTAAGAGCCTCTCTGGCAATTCAGACCAAGGCTGGTaGCCCTTTCCACCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: HTEKCPPNAFYAKSLSGNSDQGW*PFPPRA
Trigger: GGCCCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGA...ATTGCCAGAGAGGCTCTTAGCATAAAAGGCATTAGGTGGGCATTTTTCTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp CCGAACCTGCTTCCACTTCCCTGCAGGTGGAGTGCGAGCTTGCAGGGTGTACTTGTGCAAGGTAGCAAATaGCATAAAGTTCAAGATGCT +
Preference number: 2 (lower is better)
Translates to: PNLLPLPCRWSASLQGVLVQGSK*HKVQDA
Trigger: AGCATCTTGAACTTTATGGCATTTGCTACCTTGCAC...AAGTACACCCTGCAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAGGTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CCA 90 bp GAACTGTGGTCTCATGATCGCAGTGAAAATAAGCACACTCTCAACTCCCCCAGCGCGTCAGTGTCATCATaGAAGTTACTGCCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: ELWSHDRSENKHTLNSPSASVSS*KLLPGA
Trigger: GGCACCAGGCAGTAACTTCCATGATGACACTGACGC...GCTGGGGGAGTTGAGAGTGTGCTTATTTTCACTGCGATCATGAGACCACAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp GCTCAGTTTTCCCTGGCTAAAAACCCTTCGTGGGTCTCCCAGGAGGTCTGCCTTCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: AQFSLAKNPSWVSQEVCLHHGSY*LVPLNL
Trigger: TAAATTGAGAGGCACCAGGCAGTAACTTCCATGATG...AAGGCAGACCTCCTGGGAGACCCACGAAGGGTTTTTAGCCAGGGAAAACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp CGTGGGTTCTATCCTGCGGCAGAATATAAAATATCCTACCTCCTACAAAAAGGGCCATTCATGTCCTGCTaGACGGGTTCCCAGGTCACG +
Preference number: 2 (lower is better)
Translates to: RGFYPAAEYKISYLLQKGPFMSC*TGSQVT
Trigger: CGTGACCTGGGAACCCGTGCAGCAGGACATGAATGG...CCCTTTTTGTAGGAGGTAGGATATTTTATATTCTGCCGCAGGATAGAACCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp ATGATTAAGACACAGTCCCTCTTCTTCAAGGGGCTTGCGGTCCAAGGAGGGAGAAGAAGAACTGATCTGTaGGGTGTGAGGTGCATGAGA +
Preference number: 2 (lower is better)
Translates to: MIKTQSLFFKGLAVQGGRRRTDL*GVRCMR
Trigger: TCTCATGCACCTCACACCCCACAGATCAGTTCTTCT...TCTCCCTCCTTGGACCGCAAGCCCCTTGAAGAAGAGGGACTGTGTCTTAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CCA 90 bp GGAACCTGGCTCCAGCTTCATCTCGGTACCATTCATCTTCCACCGATAGGTGGCCACTGGGCTAGAGACTaGCTTGTAAAGATGATTAAG +
Preference number: 2 (lower is better)
Translates to: GTWLQLHLGTIHLPPIGGHWARD*LVKMIK
Trigger: CTTAATCATCTTTACAAGCCAGTCTCTAGCCCAGTG...GCCACCTATCGGTGGAAGATGAATGGTACCGAGATGAAGCTGGAGCCAGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CCA 90 bp TCAGTGTCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATCCTGCCAGGGTGTGGTGCTaGGCGGACTGCCATGTTCTC +
Preference number: 2 (lower is better)
Translates to: SVSSWKLLPGASQFKENPARVWC*ADCHVL
Trigger: GAGAACATGGCAGTCCGCCCAGCACCACACCCTGGC...AGGATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp GCGTCAGTGTCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATCGCTGTCAATCGGGATaGCAGGGTCAGGTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: ASVSSWKLLPGASQFKENRCQSG*QGQVGS
Trigger: ACTGCCAACCTGACCCTGTCATCCCGATTGACAGCG...ATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR TCA 90 bp CGTGGGTTCTATCCTGCGGCAGAATATAAAATATCCTACCTCCTACAAAAAGGGCCATGCCAATCCCCATaGTCACCAATCCGAACCCCT +
Preference number: 2 (lower is better)
Translates to: RGFYPAAEYKISYLLQKGPCQSP*SPIRTP
Trigger: AGGGGTTCGGATTGGTGATCATGGGGATTGGCATGG...CCCTTTTTGTAGGAGGTAGGATATTTTATATTCTGCCGCAGGATAGAACCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp ACAGAAAACAGGCTCGGAGCTTCCGAGGACATATGCCCTTCAAGATGCCTGTCCTTTAAAGAAAATCCTTaGGTGGGTTCTATCCTGCGG +
Preference number: 2 (lower is better)
Translates to: TENRLGASEDICPSRCLSFKENP*VGSILR
Trigger: CCGCAGGATAGAACCCACGCAAGGATTTTCTTTAAA...GGACAGGCATCTTGAAGGGCATATGTCCTCGGAAGCTCCGAGCCTGTTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp AGGTTTGAGGATACTGTGTCTCCCACCAATGAGCCAGTTGGCAGTCCCATTCTGCAAACAAATTCTGCCTaGCCAGTGGTTAGGTTTTCC +
Preference number: 2 (lower is better)
Translates to: RFEDTVSPTNEPVGSPILQTNSA*PVVRFS
Trigger: GGAAAACCTAACCACTGGGCAGGCAGAATTTGTTTG...CAGAATGGGACTGCCAACTGGCTCATTGGTGGGAGACACAGTATCCTCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp CAAGCTCATGTACAAGTCACTCTAGCAGGAGGCTGTTGCATTTTACAAGCTTGCGGGCTCAGTTTTCCCTaGCTAAAAACCCTTCGTGGG +
Preference number: 2 (lower is better)
Translates to: QAHVQVTLAGGCCILQACGLSFP*LKTLRG
Trigger: CCCACGAAGGGTTTTTAGCCAGGGAAAACTGAGCCC...GCAAGCTTGTAAAATGCAACAGCCTCCTGCTAGAGTGACTTGTACATGAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CAA 90 bp AGCCTGATGATAACACCCACAGCTCGTGCCAGCTTCCCCAACAGGTaGAGAAACCATCTTTATTTAAGAACTGCCTGCTACCAGAGTCAA +
Preference number: 2 (lower is better)
Translates to: SLMITPTARASFPNR*RNHLYLRTACYQSQ
Trigger: TTGACTCTGGTAGCAGGCAGTTCTTAAATAAAGATGGTTTCTCAACCTGTTGGGGAAGCTGGCACGAGCTGTGGGTGTTATCATCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331830.7
3UTR CAA 90 bp GTGCTGTTGGCTTTGCCCATGAAGTTCTCAGCAAAGCAGGTGTATTaGCCTTCATCTGACCGGCTGATGTTTCTTATGATCAAGGTGCCA +
Preference number: 2 (lower is better)
Translates to: VLLALPMKFSAKQVY*PSSDRLMFLMIKVP
Trigger: TGGCACCTTGATCATAAGAAACATCAGCCGGTCAGATGAAGGCAAATACACCTGCTTTGCTGAGAACTTCATGGGCAAAGCCAACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR TCA 90 bp CCTGTCTTCCCAAAGCCTATGACCATATACACAAGTCCACGGGTGTTCCGCAGCTATCATTTGTTGCCCTaGATGAAAGCAGATAACCTG +
Preference number: 2 (lower is better)
Translates to: PVFPKPMTIYTSPRVFRSYHLLP*MKADNL
Trigger: CAGGTTATCTGCTTTCATTCAGGGCAACAAATGATA...GCTGCGGAACACCCGTGGACTTGTGTATATGGTCATAGGCTTTGGGAAGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp AGGATGGTGAGGTGTGCACTTCGCTCCAGTTCTTCAACCTGTTCATGTCTGGTGCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: RMVRCALRSSSSTCSCLVHHGSY*LVPLNL
Trigger: TAAATTGAGAGGCACCAGGCAGTAACTTCCATGATG...CACCAGACATGAACAGGTTGAAGAACTGGAGCGAAGTGCACACCTCACCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp CTTCTGCAAGCAAGCTCATGTACAAGTCACTCTAGCAGGAGGCTGTTGCATTTTATAGCCATTCAGCAGTaGCTCCTTCCTCTGGGTAGA +
Preference number: 2 (lower is better)
Translates to: LLQASSCTSHSSRRLLHFIAIQQ*LLPLGR
Trigger: TCTACCCAGAGGAAGGAGGCACTGCTGAATGGCTAT...AAAATGCAACAGCCTCCTGCTAGAGTGACTTGTACATGAGCTTGCTTGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR GCA 90 bp CAAGCTCATGTACAAGTCACTCTAGCAGGAGGCTGTTGCATTTTACAAGCTTGCTTGTGCTGCTGCTCTTaGCTAGGGAATCTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: QAHVQVTLAGGCCILQACLCCCS*LGNLLL
Trigger: CAAGAGCAGATTCCCTAGGCAAGAGCAGCAGCACAA...GCAAGCTTGTAAAATGCAACAGCCTCCTGCTAGAGTGACTTGTACATGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp TCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATCCTTGCGTGAAACCAGCCACTCTCTaGCACAGTGTCAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: SSWKLLPGASQFKENPCVKPATL*HSVRPP
Trigger: AGGTGGCCTGACACTGTGCCAGAGAGTGGCTGGTTT...CACGCAAGGATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GGTTCTATCCTGCGGCAGAATATAAAATATCCTACCTCCTACAAAAAGGGCACTTCAGGTTGGCAGTGTTaGCTGAGAGGGCATCGTCAC +
Preference number: 2 (lower is better)
Translates to: GSILRQNIKYPTSYKKGTSGWQC*LRGHRH
Trigger: GTGACGATGCCCTCTCAGCCAACACTGCCAACCTGA...AGTGCCCTTTTTGTAGGAGGTAGGATATTTTATATTCTGCCGCAGGATAGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CAA 90 bp AGAGTGATTTTGGTTGCATCTCGCACAGATAGGATTCCAGTGCTGTaGGCTTTGCCCATGAAGTTCTCAGCAAAGCAGGTGTATTTGCCT +
Preference number: 2 (lower is better)
Translates to: RVILVASRTDRIPVL*ALPMKFSAKQVYLP
Trigger: AGGCAAATACACCTGCTTTGCTGAGAACTTCATGGGCAAAGCCAACAGCACTGGAATCCTATCTGTGCGAGATGCAACCAAAATCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp TCCTTGCGTGGGTTCTATCCTGCGGCAGAATATAAAATATCCTACCTCCTACAAAAGGATGGTGAGGTGTaGACTTCGCTCCAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: SLRGFYPAAEYKISYLLQKDGEV*TSLQFF
Trigger: GAAGAACTGGAGCGAAGTGCACACCTCACCATCCTT...TTGTAGGAGGTAGGATATTTTATATTCTGCCGCAGGATAGAACCCACGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR GCA 90 bp GCGTCAGTGTCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATGCCACATTTATCCTCTaGCCTTCCCAGAAACCTCCC +
Preference number: 2 (lower is better)
Translates to: ASVSSWKLLPGASQFKENATFIL*PSQKPP
Trigger: GGGAGGTTTCTGGGAAGGGCAGAGGATAAATGTGGC...ATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CAA 90 bp CTTCTGCAAGCAAGCTCATGTACAAGTCACTCTAGCAGGAGGCTGTaGCATTTTACAAGCTTGCATGTCCTCAGGTCACCTATTGTCTTA +
Preference number: 2 (lower is better)
Translates to: LLQASSCTSHSSRRL*HFTSLHVLRSPIVL
Trigger: TAAGACAATAGGTGACCTGAGGACATGCAAGCTTGTAAAATGCAACAGCCTCCTGCTAGAGTGACTTGTACATGAGCTTGCTTGCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CAA 90 bp ATTTTGGTTGCATCTCGCACAGATAGGATTCCAGTGCTGTTGGCTTaGCCCATGAAGTTCTCAGCAAAGCAGGTGTATTTGCCTTCATCT +
Preference number: 2 (lower is better)
Translates to: ILVASRTDRIPVLLA*PMKFSAKQVYLPSS
Trigger: AGATGAAGGCAAATACACCTGCTTTGCTGAGAACTTCATGGGCAAAGCCAACAGCACTGGAATCCTATCTGTGCGAGATGCAACCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR GCA 90 bp CATTTATTTTGTTGTCGTTCTATCCCTCAAACAAATTCTGCCTGCCCAGTGGTTTTTTCTCCGGGGAAATaGAAGCAGTCCAAGGCCGTC +
Preference number: 2 (lower is better)
Translates to: HLFCCRSIPQTNSACPVVFSPGK*KQSKAV
Trigger: GACGGCCTTGGACTGCTTGCATTTCCCCGGAGAAAA...AACCACTGGGCAGGCAGAATTTGTTTGAGGGATAGAACGACAACAAAATAAATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CCA 90 bp TCAGTGTCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATCCTCCTCTCAACTCTTTTTaGCTCCCACCCCAAACAGCC +
Preference number: 2 (lower is better)
Translates to: SVSSWKLLPGASQFKENPPLNSF*LPPQTA
Trigger: GGCTGTTTGGGGTGGGAGCCAAAAAGAGTTGAGAGG...AGGATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GCGTCAGTGTCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATATTTGTACCAGGGCATaGCCAATGTCTTCAGGCACT +
Preference number: 2 (lower is better)
Translates to: ASVSSWKLLPGASQFKENICTRA*PMSSGT
Trigger: AGTGCCTGAAGACATTGGCCATGCCCTGGTACAAAT...ATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CCA 90 bp GGAACATTTATTTTGTTGTCGTTCTATCCCTCAAACAAATTCTGCCTGCCCAGTAAGAAAATCCTTGCGTaGGTTCTATCCTGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: GTFILLSFYPSNKFCLPSKKILA*VLSCGR
Trigger: TCTGCCGCAGGATAGAACCCACGCAAGGATTTTCTT...ACTGGGCAGGCAGAATTTGTTTGAGGGATAGAACGACAACAAAATAAATGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CAA 90 bp TCATGTACAAGTCACTCTAGCAGGAGGCTGTTGCATTTTACAAGCTaGCATGTCCTCAGGTCACCTATTGTCTTATTAAACCTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: SCTSHSSRRLLHFTS*HVLRSPIVLLNLSQ
Trigger: CTGACTAAGGTTTAATAAGACAATAGGTGACCTGAGGACATGCAAGCTTGTAAAATGCAACAGCCTCCTGCTAGAGTGACTTGTACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 72 bp CCGATAGGTGGCTGGAGGGCTGGCCCGGGCGCGGCATaGCAGCAACACCTGCTCCTCCGTGGACTCCTCTGG +
Preference number: 3 (lower is better)
Translates to: PIGGWRAGPGAA*QQHLLLRGLLW
Trigger: CCAGAGGAGTCCACGGAGGAGCAGGTGTTGCTGGCATGCCGCGCCCGGGCCAGCCCTCCAGCCACCTATCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR GCA 72 bp CATCGGCGCCAGGCACCCGGGCGGTCTGCCAGTGAGTaGTGCCCTGCCTGCGGAAGGACAGCAGGTAGCCGA +
Preference number: 3 (lower is better)
Translates to: HRRQAPGRSASE*CPACGRTAGSR
Trigger: TCGGCTACCTGCTGTCCTTCCGCAGGCAGGGCAGCACTCACTGGCAGACCGCCCGGGTGCCTGGCGCCGATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR CCA 72 bp TGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTaGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: WQQEGAGCVRRR*RPAAAQREGFQ
Trigger: CTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR CCA 72 bp TGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTaGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGCCAG +
Preference number: 3 (lower is better)
Translates to: CQEVAAEGASWS*RWQKGWQAQCQ
Trigger: CTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR GCA 72 bp CAGCCAGCGCACTGTAGGCCGGGGCTTGCCGGCGGCTaGACAGCCCCAACGCAGGTTGGAGCCAATGTCAGC +
Preference number: 3 (lower is better)
Translates to: QPAHCRPGLAGG*TAPTQVGANVS
Trigger: GCTGACATTGGCTCCAACCTGCGTTGGGGCTGTGCAGCCGCCGGCAAGCCCCGGCCTACAGTGCGCTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp GCACAGTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGC +
Preference number: 3 (lower is better)
Translates to: AQCQATLAAGRG*LCPSEVASSCG
Trigger: GCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGACACTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR CCA 72 bp GACCTGGCGGACCTCGGACCAGGACTGTGGCCTCCTTaGACGCGCTGTCCACCACCGTCTGGGCCATGCACG +
Preference number: 3 (lower is better)
Translates to: DLADLGPGLWPP*TRCPPPSGPCT
Trigger: CGTGCATGGCCCAGACGGTGGTGGACAGCGCGTCCAAGGAGGCCACAGTCCTGGTCCGAGGTCCGCCAGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp GTCCCAGAGGGCCATCTCTTGGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGC +
Preference number: 3 (lower is better)
Translates to: VPEGHLLAAGRG*LCPSEVASSCG
Trigger: GCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGAGATGGCCCTCTGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639302.1
3UTR-3UTR CAA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCGAGGATGAGACCCCTTaGGCCCACACCTTGGTAGGG +
Preference number: 3 (lower is better)
Translates to: PASGIGALVLSRLGRQEPEDETP*AHTLVG
Trigger: CCCTACCAAGGTGTGGGCCAAAGGGGTCTCATCCTC...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp GAGGGTGCCACCGAGGGGGCTGCTTCCCTGGTCCGGATTTTGCTGGAGGGCCCAAGGGAGCCGTCCACTTaGCGCCACTTGATCCGGGGG +
Preference number: 3 (lower is better)
Translates to: EGATEGAASLVRILLEGPREPST*RHLIRG
Trigger: CCCCCGGATCAAGTGGCGCAAAGTGGACGGCTCCCT...TGGGCCCTCCAGCAAAATCCGGACCAGGGAAGCAGCCCCCTCGGTGGCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 72 bp GGGCCGCGGGGATCAGACGCCTCACGGGATTCAGCCTaGAGTCAGGGGCGAGTGCTTGCACGGCTAGCTCGG +
Preference number: 3 (lower is better)
Translates to: GPRGSDASRDSA*SQGRVLARLAR
Trigger: CCGAGCTAGCCGTGCAAGCACTCGCCCCTGACTTCAGGCTGAATCCCGTGAGGCGTCTGATCCCCGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 72 bp CGGGCCCATCCCCGCGGCGGTTGTAGCTGCGGATCTTaGCCTCAAAGGGCGTGTAGGGCCGGACGCTCTCGT +
Preference number: 3 (lower is better)
Translates to: RAHPRGGCSCGS*PQRACRAGRSR
Trigger: ACGAGAGCGTCCGGCCCTACACGCCCTTTGAGGTCAAGATCCGCAGCTACAACCGCCGCGGGGATGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR GCA 72 bp GAGTCTGGGGCTGCAGGTCGGGGAGGCCGAGCTGACTaGAGGCAGCACTGGAGAGGTGGGCGCATGATTGGC +
Preference number: 3 (lower is better)
Translates to: ESGAAGRGGRAD*RQHWRGGRMIG
Trigger: GCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGCCCCAGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR CCA 72 bp GAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTaGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCA +
Preference number: 3 (lower is better)
Translates to: EGASWSWRWQKG*QAQCQPGCRPS
Trigger: TGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTGTCAGGTTGGCAGTGTaGGCTGAGAGGGCATCGTCA +
Preference number: 3 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVVRLAV*AERASS
Trigger: TGACGATGCCCTCTCAGCCAACACTGCCAACCTGAC...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CAA 90 bp GCCTGTCCCGCTGCCCCCTGTGAAGGGCCACCTGTCGGAGCATGGGCTTTGGGGCTGGGCTGTGTGACCTaGGGAATCCCAGACCCTCTC +
Preference number: 3 (lower is better)
Translates to: ACPAAPCEGPPVGAWALGLGCVT*GIPDPL
Trigger: GAGAGGGTCTGGGATTCCCAAGGTCACACAGCCCAG...CCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CAA 90 bp TTGGGCAGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCCCTTTGGCCCACACCTaGGTAGGGGCCACCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LGRQEPLGSYRGQRQGPCPLAHT*VGATLG
Trigger: GCCCAGGGTGGCCCCTACCAAGGTGTGGGCCAAAGG...GCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCTGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 72 bp CCCTGGGCTCTTCCTCAGCTGAGTACACGAGTGCAGTaGGGCTCTCGGGCCCATCCCCGCGGCGGTTGTAGC +
Preference number: 3 (lower is better)
Translates to: PWALPQLSTRVQ*GSRAHPRGGCS
Trigger: GCTACAACCGCCGCGGGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACTCAGCTGAGGAAGAGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR TCA 72 bp GGGTCTCACAGCCGAAGCGGAGGATGGCCTCCCTGCTaGCAACGGTGCCCACTGGGTTGGAGGCCAGGCACT +
Preference number: 3 (lower is better)
Translates to: GSHSRSGGWPPC*QRCPLGWRPGT
Trigger: AGTGCCTGGCCTCCAACCCAGTGGGCACCGTTGTCAGCAGGGAGGCCATCCTCCGCTTCGGCTGTGAGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 72 bp TGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCCTCACGGTCACATGGT +
Preference number: 3 (lower is better)
Translates to: WSWRWQKGWQAQ*QPGCRPSRSHG
Trigger: ACCATGTGACCGTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR GCA 72 bp CGTGCCTTTGCTCCAGAGCACCACGGCCTTTGGAGCTaGCCGGGGCTGGCAGGGGATAAGGATCTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: RAFAPEHHGLWS*PGLAGDKDLSP
Trigger: GGGGGAGAGATCCTTATCCCCTGCCAGCCCCGGGCAGCTCCAAAGGCCGTGGTGCTCTGGAGCAAAGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CAA 90 bp GGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCTCTTGGTCCCAGGGCTaGCCCTTCTTCCTTAGACTG +
Preference number: 3 (lower is better)
Translates to: GLRLPASGIGALVLSRLGSWSQG*PFFLRL
Trigger: CAGTCTAAGGAAGAAGGGCAAGCCCTGGGACCAAGA...GCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CAA 90 bp GGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACCCAGTGCCCAGAATGTaGCTGGCTATGACCCGGAAC +
Preference number: 3 (lower is better)
Translates to: GVGRRAGRPSASPVVGPHPVPRM*LAMTRN
Trigger: GTTCCGGGTCATAGCCAGCAACATTCTGGGCACTGG...GTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp TTGGGCAGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCCCAGAGGGCCATCTCTaGGCAGCAGGAAGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: LGRQEPLGSYRGQRQGPCPEGHL*AAGRGW
Trigger: CCAGCCCCTTCCTGCTGCCAAGAGATGGCCCTCTGG...GCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCTGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639302.1
3UTR TCA 72 bp CCTGCAGAAAGCCGAAGCGGAGGATGGCCTCCCTGCTaGCAACGGTGCCCACTGGGTTGGAGGCCAGGCACT +
Preference number: 3 (lower is better)
Translates to: PAESRSGGWPPC*QRCPLGWRPGT
Trigger: AGTGCCTGGCCTCCAACCCAGTGGGCACCGTTGTCAGCAGGGAGGCCATCCTCCGCTTCGGCTTTCTGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532366.2
3UTR-3UTR CAA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCAAGGCGGGAGAGCTCTaGGTCCCAGGGCTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGKAGEL*VPGLAL
Trigger: AAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCTT...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CAA 90 bp TCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCGTCAGGTTGGCAGTGTaGGCTGAGAGGGCATCGTCA +
Preference number: 3 (lower is better)
Translates to: SGHLGSRKGLAVSVGGGVVRLAV*AERASS
Trigger: TGACGATGCCCTCTCAGCCAACACTGCCAACCTGAC...GACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CAA 90 bp TGCAGGGTGTACTTAGCGATGGGGCTGTGGTTGTCGAAGCCACGGCTCCAGCTGCCTTTGGCCCACACCTaGGTAGGGGCCACCCTGGGC +
Preference number: 3 (lower is better)
Translates to: CRVYLAMGLWLSKPRLQLPLAHT*VGATLG
Trigger: GCCCAGGGTGGCCCCTACCAAGGTGTGGGCCAAAGG...CAGCTGGAGCCGTGGCTTCGACAACCACAGCCCCATCGCTAAGTACACCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp GCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACGGTCACATGGTACTTACGGTGTCTCGGCCCTaGGAGTTCTCCGCCTCACAC +
Preference number: 3 (lower is better)
Translates to: AGRPSASPVVGPHGHMVLTVSRP*EFSASH
Trigger: GTGTGAGGCGGAGAACTCCAAGGGCCGAGACACCGT...AAGTACCATGTGACCGTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CAA 90 bp ACCGAGGGGGCTGCTTCCCTGGTCCGGATTTTGCTGGAGGGCCCACTAGGCTCCTCTTCCAGGCTCAGCTaGGAGAACCGCAGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: TEGAASLVRILLEGPLGSSSRLS*ENRRSP
Trigger: TGGGGACCTGCGGTTCTCCAAGCTGAGCCTGGAAGA...GGAGCCTAGTGGGCCCTCCAGCAAAATCCGGACCAGGGAAGCAGCCCCCTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CAA 90 bp CGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCCCAGCAAAGCAGGTGTATTaGCCTTCATCTGACCGGCTG +
Preference number: 3 (lower is better)
Translates to: RRGGGFMVVALAEGLAGPAKQVY*PSSDRL
Trigger: CAGCCGGTCAGATGAAGGCAAATACACCTGCTTTGC...TGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 72 bp ACTGCGGGGACAGGGAGCCGTCCACTTTGCGCCACTTaGTCCGGGGGACAGGGTTCCCAAAGGCGAAGCACT +
Preference number: 3 (lower is better)
Translates to: TAGTGSRPLCAT*SGGQGSQRRST
Trigger: AGTGCTTCGCCTTTGGGAACCCTGTCCCCCGGATCAAGTGGCGCAAAGTGGACGGCTCCCTGTCCCCGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 72 bp GGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTaGTCGAGGGAGAAGGCGGGAGAGCTCTTGGTCCCA +
Preference number: 3 (lower is better)
Translates to: GSYRGQRQGPCC*SREKAGELLVP
Trigger: TGGGACCAAGAGCTCTCCCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR GCA 72 bp GTTGGAGGCCAGGCACTGGTAGACCCCGGCATCCTGTaGCTTGGTGGGGTTCATGATGACCAGGTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: VGGQALVDPGIL*LGGVHDDQVAP
Trigger: GGGGGCAACCTGGTCATCATGAACCCCACCAAGGCACAGGATGCCGGGGTCTACCAGTGCCTGGCCTCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR GCA 72 bp GGCGAAGCACTCCAGGGTGACCTGCTGCCCCACCAGTaGATAGGTCTCTGCTGGGAACCGGGCCTTGATGCT +
Preference number: 3 (lower is better)
Translates to: GEALQGDLLPHQ*IGLCWEPGLDA
Trigger: AGCATCAAGGCCCGGTTCCCAGCAGAGACCTATGCACTGGTGGGGCAGCAGGTCACCCTGGAGTGCTTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp GTGTCCCTGGAGCCTAATACCCTTACTGGGGCAGTGTaGACCAACGAGGCCTGGGCCTGGGGACTAGGCTGG +
Preference number: 3 (lower is better)
Translates to: VSLEPNTLTGAV*TNEAWAWGLGW
Trigger: CCAGCCTAGTCCCCAGGCCCAGGCCTCGTTGGTCCACACTGCCCCAGTAAGGGTATTAGGCTCCAGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 72 bp GGTGATGACACCACCAGATGCCTCAGAGCCTTGGCCTaGCTGGAGCCTGGCCTCTTGGGCTGTGCTGTCCAG +
Preference number: 3 (lower is better)
Translates to: GDDTTRCLRALA*LEPGLLGCAVQ
Trigger: CTGGACAGCACAGCCCAAGAGGCCAGGCTCCAGCCAGGCCAAGGCTCTGAGGCATCTGGTGGTGTCATCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 72 bp TACCATTCATCTTCCACCGATAGGTGGCTGGAGGGCTaGCCCGGGCGCGGCATGCCAGCAACACCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: YHSSSTDRWLEG*PGRGMPATPAP
Trigger: AGGAGCAGGTGTTGCTGGCATGCCGCGCCCGGGCCAGCCCTCCAGCCACCTATCGGTGGAAGATGAATGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 72 bp TCCAGGGAGCCTATGAGGATCAGCATCGCCACGGAGTaGGAAATGACGGTGCCAGGGTGTGGTGCTGGGCGG +
Preference number: 3 (lower is better)
Translates to: SREPMRISIATE*EMTVPGCGAGR
Trigger: CCGCCCAGCACCACACCCTGGCACCGTCATTTCCCACTCCGTGGCGATGCTGATCCTCATAGGCTCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 72 bp GGTGACCTGCTGCCCCACCAGTGCATAGGTCTCTGCTaGGAACCGGGCCTTGATGCTGGGTGCAAAGAGCCG +
Preference number: 3 (lower is better)
Translates to: GDLLPHQCIGLC*EPGLDAGCKEP
Trigger: CGGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCAGCAGAGACCTATGCACTGGTGGGGCAGCAGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp GGTGGTGTCGCCAATGTCCCTCACCACCACACCTCCTaGGGGACCTGGCGGACAGAGGCTGTCACATGGAGA +
Preference number: 3 (lower is better)
Translates to: GGVANVPHHHTS*GTWRTEAVTWR
Trigger: TCTCCATGTGACAGCCTCTGTCCGCCAGGTCCCCCAGGAGGTGTGGTGGTGAGGGACATTGGCGACACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR-3UTR CAA 90 bp GCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCTGTGCAGAATGGGTCTaGGAGGGGTGGGAGACCCCA +
Preference number: 3 (lower is better)
Translates to: ADCRQHWRGGRMIGHLLPCAEWV*EGWETP
Trigger: TGGGGTCTCCCACCCCTCCAAGACCCATTCTGCACA...GGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CAA 90 bp GTTGTAGCTGCGGATCTTGACCTCAAAGGGCGTGTAGGGCCGGACGCTCTCGTTCCTTTGGCCCACACCTaGGTAGGGGCCACCCTGGGC +
Preference number: 3 (lower is better)
Translates to: VVAADLDLKGRVGPDALVPLAHT*VGATLG
Trigger: GCCCAGGGTGGCCCCTACCAAGGTGTGGGCCAAAGG...AACGAGAGCGTCCGGCCCTACACGCCCTTTGAGGTCAAGATCCGCAGCTACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp AGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCGAGGATGAGACCCCTTaGGCCCACACCTTGGTAGGG +
Preference number: 3 (lower is better)
Translates to: RQEPLGSYRGQRQGPCCCEDETP*AHTLVG
Trigger: CCCTACCAAGGTGTGGGCCAAAGGGGTCTCATCCTC...GCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp TGTTGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGACGGTCACATGGTACTaGGTGTTGGGATGCAGGCCG +
Preference number: 3 (lower is better)
Translates to: CCQEVAAEGASWSWRWQKTVTWY*VLGCRP
Trigger: CGGCCTGCATCCCAACACCAAGTACCATGTGACCGT...CTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp TTTTGGGCTCTTGCCCAGAGTACAGGCTGGCTGGCCCTTGGGGCTGCCCTAAAGAAGGCGGGAGAGCTCTaGGTCCCAGGGCTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: FWALAQSTGWLALGAALKKAGEL*VPGLAL
Trigger: AAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCTT...CTTTAGGGCAGCCCCAAGGGCCAGCCAGCCTGTACTCTGGGCAAGAGCCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp CACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTGGAGGGACACAGCGTCAGGGTCCTaGCTGCTGCTCGAGGGAGAA +
Preference number: 3 (lower is better)
Translates to: HWRGGRMIGHLLPKPWRDTASGS*LLLEGE
Trigger: TTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGT...GTCCCTCCAGGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CAA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCAGGGGCTTGAAGAAGTaGAGCTCTAAGGCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: LKGLRLPASGIGALVLSRRGLKK*SSKASS
Trigger: GGAAGAAGCCTTAGAGCTCAACTTCTTCAAGCCCCT...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CAA 90 bp ACAGGCCCGAAGGTGGTTTGGGATCCCAGGGCTGAACTCCAAGCTGCAGGTGATAGATGCCTCAGAGCCTaGGCCTGGCTGGAGCCTGGC +
Preference number: 3 (lower is better)
Translates to: TGPKVVWDPRAELQAAGDRCLRA*AWLEPG
Trigger: GCCAGGCTCCAGCCAGGCCAAGGCTCTGAGGCATCT...ATCACCTGCAGCTTGGAGTTCAGCCCTGGGATCCCAAACCACCTTCGGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CAA 90 bp ACCGAGGGGGCTGCTTCCCTGGTCCGGATTTTGCTGGAGGGCCCACTAGGCTCCACATGGTACTTGGTGTaGGGATGCAGGCCGCTGACT +
Preference number: 3 (lower is better)
Translates to: TEGAASLVRILLEGPLGSTWYLV*GCRPLT
Trigger: AGTCAGCGGCCTGCATCCCAACACCAAGTACCATGT...GGAGCCTAGTGGGCCCTCCAGCAAAATCCGGACCAGGGAAGCAGCCCCCTCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp CAGGGGGTGAGGCCCAGCACCTGTGCAGTCTCGGCATTGCCCTCGATGTTTGCAAAAGTCCAGGAGATGTaGCCAGGAGGTCGCCGCGGA +
Preference number: 3 (lower is better)
Translates to: QGVRPSTCAVSALPSMFAKVQEM*PGGRRG
Trigger: TCCGCGGCGACCTCCTGGCAACATCTCCTGGACTTT...TGCAAACATCGAGGGCAATGCCGAGACTGCACAGGTGCTGGGCCTCACCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp TGTTGCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGAGGTGGAGTGCGAGCTaGCAGGGTGTACTTAGCGAT +
Preference number: 3 (lower is better)
Translates to: CCQEVAAEGASWSWRWQKRWSAS*QGVLSD
Trigger: ATCGCTAAGTACACCCTGCAAGCTCGCACTCCACCT...CTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTACCCTTGTGGCAAGATaGAGACCTTTCCTAAGGAGA +
Preference number: 3 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVTLVAR*RPFLRR
Trigger: TCTCCTTAGGAAAGGTCTCAATCTTGCCACAAGGGT...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638577.1
3UTR TCA 72 bp CGGTCACATGGTACTTGGTGTTGGGATGCAGGCCGCTaGCTCGGGCACTGGTGTCCAGCCCTGCTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: RSHGTWCWDAGR*LGHWCPALLSS
Trigger: TGAGGACAGCAGGGCTGGACACCAGTGCCCGAGTCAGCGGCCTGCATCCCAACACCAAGTACCATGTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR GCA 72 bp CATGCTTGTGCCTCCATTCCTCACGATGTGGACTTCTaGAGGGATCCCATCCCCTCCGGGCCCTGTGGTCCG +
Preference number: 3 (lower is better)
Translates to: HACASIPHDVDF*RDPIPSGPCGP
Trigger: CGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCACATCGTGAGGAATGGAGGCACAAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR GCA 72 bp CGCCACGGAGTGGGAAATGACGGTGCCAGGGTGTGGTaGTGGGCGGACTGCCATGTTCTCCACCATCATGCT +
Preference number: 3 (lower is better)
Translates to: RHGVGNDGARVW*WADCHVLHHHA
Trigger: AGCATGATGGTGGAGAACATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTCATTTCCCACTCCGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR GCA 72 bp CAGGGTGACCTGCTGCCCCACCAGTGCATAGGTCTCTaGTGGGAACCGGGCCTTGATGCTGGGTGCAAAGAG +
Preference number: 3 (lower is better)
Translates to: QGDLLPHQCIGL*WEPGLDAGCKE
Trigger: CTCTTTGCACCCAGCATCAAGGCCCGGTTCCCAGCAGAGACCTATGCACTGGTGGGGCAGCAGGTCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp TCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTaGCGGAGTCCGTATAGGGTCCCAGAGGGCCATCTC +
Preference number: 3 (lower is better)
Translates to: SGVPAGPRTALK*RSPYRVPEGHL
Trigger: GAGATGGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR CCA 72 bp CCCGCTGCCCCCTGTGAAGGGCCACCTGTCGGAGCATaGGCTTTGGGGTTTCCTAGTTGTGCTGCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: PAAPCEGPPVGA*ALGFPSCAAAL
Trigger: AAGAGCAGCAGCACAACTAGGAAACCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR CCA 72 bp TTGGGCTCTTGCCCAGAGTACAGGCTGGCTGGCCCTTaGGGCTGCCCTAAAGAGGCAGCATACGCTGGGATG +
Preference number: 3 (lower is better)
Translates to: LGSCPEYRLAGP*GCPKEAAYAGM
Trigger: CATCCCAGCGTATGCTGCCTCTTTAGGGCAGCCCCAAGGGCCAGCCAGCCTGTACTCTGGGCAAGAGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 72 bp CACACTGGTACATGCCCGAGTCTTCCAGGCTCAGCTTaGAGAACCGCAGGTCCCCAGCCAACACCTCCACCC +
Preference number: 3 (lower is better)
Translates to: HTGTCPSLPGSA*RTAGPQPTPPP
Trigger: GGGTGGAGGTGTTGGCTGGGGACCTGCGGTTCTCCAAGCTGAGCCTGGAAGACTCGGGCATGTACCAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp GGGCTGTGGTTGTCGAAGCCACGGCTCCAGCTGAGCTaGATGGTGGTGTCGCCAATGTCCCTCACCACCACA +
Preference number: 3 (lower is better)
Translates to: GLWLSKPRLQLS*MVVSPMSLTTT
Trigger: TGTGGTGGTGAGGGACATTGGCGACACCACCATCCAGCTCAGCTGGAGCCGTGGCTTCGACAACCACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp GATGAAGTTGGGGAACTCGTTGAGGAGCCAGCGGTAGGACAAGCCTGGGTAGTGAGATGCCTCAGAGCCTaGGCCTGGCTGGAGCCTGGC +
Preference number: 3 (lower is better)
Translates to: DEVGELVEEPAVGQAWVVRCLRA*AWLEPG
Trigger: GCCAGGCTCCAGCCAGGCCAAGGCTCTGAGGCATCT...CACTACCCAGGCTTGTCCTACCGCTGGCTCCTCAACGAGTTCCCCAACTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CAA 90 bp GTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGACATGGTACTTGGTGTaGGGATGCAGGCCGCTGACT +
Preference number: 3 (lower is better)
Translates to: VWERIWPGGPRYTWEQAGTWYLV*GCRPLT
Trigger: AGTCAGCGGCCTGCATCCCAACACCAAGTACCATGT...CCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp GAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACATACGGTCACATGGTACTaGGTGTTGGGATGCAGGCCG +
Preference number: 3 (lower is better)
Translates to: ERIWPGGPRYTWEQAGPHTVTWY*VLGCRP
Trigger: CGGCCTGCATCCCAACACCAAGTACCATGTGACCGT...ATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp CTCACGATGTGGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTGGTCCGACCCTGTGGTCCGAATTaGTACCAGGGCATGGCCAAT +
Preference number: 3 (lower is better)
Translates to: LTMWTSAGIPSPPGPVVRPCGPN*YQGMAN
Trigger: ATTGGCCATGCCCTGGTACAAATTCGGACCACAGGG...TCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCACATCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp GTCAGGTTGTCACCCAAGTTGATGTCGGCACTTGAGGGGGCTAGAGTGATTTTGACTGTAGGCCGGGGCTaGCCGGCGGCTGCACAGCCC +
Preference number: 3 (lower is better)
Translates to: VRLSPKLMSALEGARVILTVGRG*PAAAQP
Trigger: GGGCTGTGCAGCCGCCGGCAAGCCCCGGCCTACAGT...CAAAATCACTCTAGCCCCCTCAAGTGCCGACATCAACTTGGGTGACAACCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 72 bp CCTGCTCCTCCGTGGACTCCTCTGGGAATAGCACACTaGGGGGCTGGTCTTCAAAGACAGGCCCGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: PAPPWTPLGIAH*GAGLQRQARRW
Trigger: CCACCTTCGGGCCTGTCTTTGAAGACCAGCCCCTCAGTGTGCTATTCCCAGAGGAGTCCACGGAGGAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR GCA 72 bp ACCTTGCTGGGCCCTGAGACTCTGTCTGGAGAGAGCTaGCTTCCCCCTGAGGCTGGGTGTACATCTGGACTG +
Preference number: 3 (lower is better)
Translates to: TLLGPETLSGES*LPPEAGCTSGL
Trigger: CAGTCCAGATGTACACCCAGCCTCAGGGGGAAGGCAGCTCTCTCCAGACAGAGTCTCAGGGCCCAGCAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 72 bp TCTTGCCCAGAGTACAGGCTGGCTGGCCCTTGGGGCTaGCCTAAAGAGGCAGCATACGCTGGGATGAGCACT +
Preference number: 3 (lower is better)
Translates to: SCPEYRLAGPWG*PKEAAYAGMST
Trigger: AGTGCTCATCCCAGCGTATGCTGCCTCTTTAGGGCAGCCCCAAGGGCCAGCCAGCCTGTACTCTGGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 72 bp GGTGTCCAGCCCTGCTGTCCTCACTCGGTCCGCAGCTaGTTCTTTGTCCCCAGCTTTCCAGTAGCGGATCTC +
Preference number: 3 (lower is better)
Translates to: GVQPCCPHSVRS*FFVPSFPVADL
Trigger: GAGATCCGCTACTGGAAAGCTGGGGACAAAGAAGCAGCTGCGGACCGAGTGAGGACAGCAGGGCTGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR CCA 72 bp CCCCCTGTGAAGGGCCACCTGTCGGAGCATGGGCTTTaGGGTTTCCTAGTTGTGCTGCTGCTCTTGCCTAGG +
Preference number: 3 (lower is better)
Translates to: PPVKGHLSEHGL*GFLVVLLLLPR
Trigger: CCTAGGCAAGAGCAGCAGCACAACTAGGAAACCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR CCA 72 bp TGCCAAGCTGTGAGCCTCTCTAAGCTGTGCAGGCCCTaGATGGGACGGGTAAGTTGGAGGAGTCTTGGGGCC +
Preference number: 3 (lower is better)
Translates to: CQAVSLSKLCRP*MGRVSWRSLGA
Trigger: GGCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTTAGAGAGGCTCACAGCTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 72 bp CATCGCCACGGAGTGGGAAATGACGGTGCCAGGGTGTaGTGCTGGGCGGACTGCCATGTTCTCCACCATCAT +
Preference number: 3 (lower is better)
Translates to: HRHGVGNDGARV*CWADCHVLHHH
Trigger: ATGATGGTGGAGAACATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTCATTTCCCACTCCGTGGCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 72 bp CTGAGGCATTGGTTCGGGCAATGTACAGGTTCCCTGTaGTCTGGGACACGAAGTGACGCCCGTCCGTCGGGA +
Preference number: 3 (lower is better)
Translates to: LRHWFGQCTGSL*SGTRSDARPSG
Trigger: TCCCGACGGACGGGCGTCACTTCGTGTCCCAGACCACAGGGAACCTGTACATTGCCCGAACCAATGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp AGTCAGGGGCGAGTGCTTGCACGGCTAGCTCGGCGCTaGCGTAGATGGTACCGTGCTTATTCTCTGCCACAC +
Preference number: 3 (lower is better)
Translates to: SQGRVLARLARR*RRWYRAYSLPH
Trigger: GTGTGGCAGAGAATAAGCACGGTACCATCTACGCCAGCGCCGAGCTAGCCGTGCAAGCACTCGCCCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp GTGCGAGCTTGCAGGGTGTACTTAGCGATGGGGCTGTaGTTGTCGAAGCCACGGCTCCAGCTGAGCTGGATG +
Preference number: 3 (lower is better)
Translates to: VRACRVYLAMGL*LSKPRLQLSWM
Trigger: CATCCAGCTCAGCTGGAGCCGTGGCTTCGACAACCACAGCCCCATCGCTAAGTACACCCTGCAAGCTCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp CTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCACAGCGTCAGGGTCCTaGCTGCTGCTCGAGGGAGAA +
Preference number: 3 (lower is better)
Translates to: LRGHRHLGCDYLRPRLVPTASGS*LLLEGE
Trigger: TTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGT...GGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CAA 90 bp TTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGGTCAGGTTGGCAGTGTaGGCTGAGAGGGCATCGTCA +
Preference number: 3 (lower is better)
Translates to: FMSGVPAGPRTALKWRSPVRLAV*AERASS
Trigger: TGACGATGCCCTCTCAGCCAACACTGCCAACCTGAC...CGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CAA 90 bp CTCCCTAGGCCCTGGAGAGGTGCCTACAGTTGGTTCCTTTTCCTAGTCCCCAGGCTGGGCTGTGTGACCTaGGGAATCCCAGACCCTCTC +
Preference number: 3 (lower is better)
Translates to: LPRPWRGAYSWFLFLVPRLGCVT*GIPDPL
Trigger: GAGAGGGTCTGGGATTCCCAAGGTCACACAGCCCAG...CCTGGGGACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp GGTCTCGCTCCTCCTTGGAGAATTCCTGCAGAAAGCCGAAGCGGAGGATGGCCTCCGGCATCCTGTGCCTaGGTGGGGTTCATGATGACC +
Preference number: 3 (lower is better)
Translates to: GLAPPWRIPAESRSGGWPPASCA*VGFMMT
Trigger: GGTCATCATGAACCCCACCAAGGCACAGGATGCCGG...AGGCCATCCTCCGCTTCGGCTTTCTGCAGGAATTCTCCAAGGAGGAGCGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532366.2
3UTR-3UTR CAA 90 bp AAACCTCCCAATACCAGGACACACAGCATGAATGCTGCATTCCCCTCCCAGGCACCTTTGGCCCACACCTaGGTAGGGGCCACCCTGGGC +
Preference number: 3 (lower is better)
Translates to: KPPNTRTHSMNAAFPSQAPLAHT*VGATLG
Trigger: GCCCAGGGTGGCCCCTACCAAGGTGTGGGCCAAAGG...TGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTATTGGGAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp TTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGACGGTCACATGGTACTaGGTGTTGGGATGCAGGCCG +
Preference number: 3 (lower is better)
Translates to: FMSGVPAGPRTALKWRSPTVTWY*VLGCRP
Trigger: CGGCCTGCATCCCAACACCAAGTACCATGTGACCGT...CGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp TGGGAACCGGGCCTTGATGCTGGGTGCAAAGAGCCGGGTATCTTCAGCAGCCAGACGGTCACATGGTACTaGGTGTTGGGATGCAGGCCG +
Preference number: 3 (lower is better)
Translates to: WEPGLDAGCKEPGIFSSQTVTWY*VLGCRP
Trigger: CGGCCTGCATCCCAACACCAAGTACCATGTGACCGT...CTGGCTGCTGAAGATACCCGGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CAA 90 bp AGGAGTAGTTGCCCAGGTCTGAGGCATTGGTTCGGGCAATGTACAGGTTCCCTGCTCCCCCAAAGTGTCTaGGTCCCCCGCGGGTCTCAC +
Preference number: 3 (lower is better)
Translates to: RSSCPGLRHWFGQCTGSLLPQSV*VPRGSH
Trigger: GTGAGACCCGCGGGGGACCAAGACACTTTGGGGGAG...CAGGGAACCTGTACATTGCCCGAACCAATGCCTCAGACCTGGGCAACTACTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 72 bp GCAATGTACAGGTTCCCTGTGGTCTGGGACACGAAGTaGCGCCCGTCCGTCGGGATGAAGTTGGGGAACTCG +
Preference number: 3 (lower is better)
Translates to: AMYRFPVVWDTK*RPSVGMKLGNS
Trigger: CGAGTTCCCCAACTTCATCCCGACGGACGGGCGTCACTTCGTGTCCCAGACCACAGGGAACCTGTACATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp TGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTaGGAGCAGGCAGGGCCACATTTATCCTCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: WERIWPGGPRYT*EQAGPHLSSAL
Trigger: AAGGGCAGAGGATAAATGTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR CCA 72 bp AAATGCAAGCAGTCCAAGGCCGTCTGGGAGCGGATCTaGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCA +
Preference number: 3 (lower is better)
Translates to: KCKQSKAVWERI*PGGPRYTWEQA
Trigger: TGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR CCA 72 bp GGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTaGTCCGAATTTGTACCAGGGCATGGCCAATGTCTT +
Preference number: 3 (lower is better)
Translates to: GLLQGSHPLRAL*SEFVPGHGQCL
Trigger: AAGACATTGGCCATGCCCTGGTACAAATTCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 72 bp TCCACCATCATGCTTGTGCCTCCATTCCTCACGATGTaGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCT +
Preference number: 3 (lower is better)
Translates to: STIMLVPPFLTM*TSAGIPSPPGP
Trigger: AGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCACATCGTGAGGAATGGAGGCACAAGCATGATGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 72 bp CACGGAGTGGGAAATGACGGTGCCAGGGTGTGGTGCTaGGCGGACTGCCATGTTCTCCACCATCATGCTTGT +
Preference number: 3 (lower is better)
Translates to: HGVGNDGARVWC*ADCHVLHHHAC
Trigger: ACAAGCATGATGGTGGAGAACATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTCATTTCCCACTCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp CTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCGTCAGGTTGGCAGTGTaGGCTGAGAGGGCATCGTCA +
Preference number: 3 (lower is better)
Translates to: LRGHRHLGCDYLRPRLVPVRLAV*AERASS
Trigger: TGACGATGCCCTCTCAGCCAACACTGCCAACCTGAC...GGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CAA 90 bp CTGTCGGAGCATGGGCTTTGGGGTTTCCTAGTTGTGCTGCTGCTCTTGCCTAGGTGTGCAGAATGGGTCTaGGAGGGGTGGGAGACCCCA +
Preference number: 3 (lower is better)
Translates to: LSEHGLWGFLVVLLLLPRCAEWV*EGWETP
Trigger: TGGGGTCTCCCACCCCTCCAAGACCCATTCTGCACA...CCTAGGCAAGAGCAGCAGCACAACTAGGAAACCCCAAAGCCCATGCTCCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CAA 90 bp GTGCAGAATGGGTCTTGGAGGGGTGGGAGACCCCACCAAGACAAGCCCTTTAGTTGTGCAGAATGGGTCTaGGAGGGGTGGGAGACCCCA +
Preference number: 3 (lower is better)
Translates to: VQNGSWRGGRPHQDKPFSCAEWV*EGWETP
Trigger: TGGGGTCTCCCACCCCTCCAAGACCCATTCTGCACA...ACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACCCATTCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CAA 90 bp CGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCACCAAGTGTGCAGAATGGGTCTaGGAGGGGTGGGAGACCCCA +
Preference number: 3 (lower is better)
Translates to: RHLGCDYLRPRLVPLSTKCAEWV*EGWETP
Trigger: TGGGGTCTCCCACCCCTCCAAGACCCATTCTGCACA...CTTGGTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CAA 90 bp CCCACCAAGACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCAAAGTCCAGGAGATGTaGCCAGGAGGTCGCCGCGGA +
Preference number: 3 (lower is better)
Translates to: PTKTSPLVTQPPEVALSIKVQEM*PGGRRG
Trigger: TCCGCGGCGACCTCCTGGCAACATCTCCTGGACTTT...GATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGTCTTGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp TCTCGTTGCTGTAGACAAAGTACTGGGCATCGGCGCCAGGCACCCGGGCGGTCTCACTGTAGGGTCAGGTaGTCACCCAAGTTGATGTCG +
Preference number: 3 (lower is better)
Translates to: SRCCRQSTGHRRQAPGRSHCRVR*SPKLMS
Trigger: CGACATCAACTTGGGTGACAACCTGACCCTACAGTG...AGACCGCCCGGGTGCCTGGCGCCGATGCCCAGTACTTTGTCTACAGCAACGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CAA 90 bp GGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGCTGGTGCCCCTTTCCTCTTGGTCCCAGGGCTaGCCCTTCTTCCTTAGACTG +
Preference number: 3 (lower is better)
Translates to: GHRHLGCDYLRPRLVPLSSWSQG*PFFLRL
Trigger: CAGTCTAAGGAAGAAGGGCAAGCCCTGGGACCAAGA...GGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR-3UTR CAA 90 bp GCTCAGTTTTCCCTGGCTAAAAACCCTTCGTGGGTCTCCCAGGAGGTCTGCCTTTGTGCAGAATGGGTCTaGGAGGGGTGGGAGACCCCA +
Preference number: 3 (lower is better)
Translates to: AQFSLAKNPSWVSQEVCLCAEWV*EGWETP
Trigger: TGGGGTCTCCCACCCCTCCAAGACCCATTCTGCACA...AAGGCAGACCTCCTGGGAGACCCACGAAGGGTTTTTAGCCAGGGAAAACTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp CTCCCTAGGCCCTGGAGAGGTGCCTACAGTTGGTTCCTTTTCCTAGTCCCCAGGGTCGGAGCATGGGCTTaGGGGTTTCCTAGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: LPRPWRGAYSWFLFLVPRVGAWA*GFPSCA
Trigger: AGCACAACTAGGAAACCCCAAAGCCCATGCTCCGAC...CCTGGGGACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp CAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTGACTATCTCAGACCAAGGGAGGATGAGACCCCTTaGGCCCACACCTTGGTAGGG +
Preference number: 3 (lower is better)
Translates to: QCWLRGHRHLGCDYLRPREDETP*AHTLVG
Trigger: CCCTACCAAGGTGTGGGCCAAAGGGGTCTCATCCTC...CCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 72 bp GCAGTGTTGGCTGAGAGGGCATCGTCACCTGGGTTGTaGCTATCTCAGACCAAGGCTGGTGCCCCTTTCCAC +
Preference number: 3 (lower is better)
Translates to: AVLAERASSPGL*LSQTKAGAPFH
Trigger: GTGGAAAGGGGCACCAGCCTTGGTCTGAGATAGTCACAACCCAGGTGACGATGCCCTCTCAGCCAACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR TCA 72 bp GCGGACTGCCATGTTCTCCACCATCATGCTTGTGCCTaGAACCAGCACAAGCTGAGTCAGCTGGGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: ADCHVLHHHACA*NQHKLSQLGLG
Trigger: TCCCAGGCCCAGCTGACTCAGCTTGTGCTGGTTTCAGGCACAAGCATGATGGTGGAGAACATGGCAGTCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638577.1
3UTR GCA 72 bp ATAGGTCTCTGCTGGGAACCGGGCCTTGATGCTGGGTaGAAAGAGCCGGGTATCTTCAGCAGCCAGGTTGAG +
Preference number: 3 (lower is better)
Translates to: IGLCWEPGLDAG*KEPGIFSSQVE
Trigger: CTCAACCTGGCTGCTGAAGATACCCGGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCAGCAGAGACCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 72 bp CTCATAGTCCATCCAGGGGGTGAGGCCCAGCACCTGTaGAGTCTCGGCATTGCCCTCGATGTTTGCAGGATT +
Preference number: 3 (lower is better)
Translates to: LIVHPGGEAQHL*SLGIALDVCRI
Trigger: AATCCTGCAAACATCGAGGGCAATGCCGAGACTGCACAGGTGCTGGGCCTCACCCCCTGGATGGACTATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR GCA 72 bp CTGGGCGGACTGCCATGTTCTCCACCATCATGCTTGTaGCTGAAACCAGCACAAGCTGAGTCAGCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: LGGLPCSPPSCL*LKPAQAESAGP
Trigger: AGGCCCAGCTGACTCAGCTTGTGCTGGTTTCAGGCACAAGCATGATGGTGGAGAACATGGCAGTCCGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638577.1
3UTR CCA 72 bp TTTTCTCCGGGGAAATGCAAGCAGTCCAAGGCCGTCTaGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACC +
Preference number: 3 (lower is better)
Translates to: FSPGKCKQSKAV*ERIWPGGPRYT
Trigger: GGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTGCTTGCATTTCCCCGGAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR CCA 72 bp TCTAAGCTGTGCAGGCCCTGGATGGGACGGGTAAGTTaGAGGAGTCTTGGGGCCGAGGCAAGATGTATCCCA +
Preference number: 3 (lower is better)
Translates to: SKLCRPWMGRVS*RSLGAEARCIP
Trigger: TGGGATACATCTTGCCTCGGCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 72 bp AGGGGCTGGTCTTCAAAGACAGGCCCGAAGGTGGTTTaGGATCCCAGGGCTGAACTCCAAGCTGCAGGTGAT +
Preference number: 3 (lower is better)
Translates to: RGWSSKTGPKVV*DPRAELQAAGD
Trigger: ATCACCTGCAGCTTGGAGTTCAGCCCTGGGATCCCAAACCACCTTCGGGCCTGTCTTTGAAGACCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 72 bp AGGATTGGTCCGAACCTGCTTCCACTTCCCTGCAGGTaGAGTGCGAGCTTGCAGGGTGTACTTAGCGATGGG +
Preference number: 3 (lower is better)
Translates to: RIGPNLLPLPCR*SASLQGVLSDG
Trigger: CCCATCGCTAAGTACACCCTGCAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAGGTTCGGACCAATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR-3UTR CAA 90 bp ATTCTAAGAGTCTCATCTCTGGATGGACACTTGGACCATCTCCTGCCCCTCCAGAAGGCGGGAGAGCTCTaGGTCCCAGGGCTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: ILRVSSLDGHLDHLLPLQKAGEL*VPGLAL
Trigger: AAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCTT...CTGGAGGGGCAGGAGATGGTCCAAGTGTCCATCCAGAGATGAGACTCTTAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp TCTGGACTGTTAGAGCAACAAGGACCAGAGAGCCAGGGCAAAGGGCTCTGTAAGACAGCGTCAGGGTCCTaGCTGCTGCTCGAGGGAGAA +
Preference number: 3 (lower is better)
Translates to: SGLLEQQGPESQGKGLCKTASGS*LLLEGE
Trigger: TTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGT...CTTACAGAGCCCTTTGCCCTGGCTCTCTGGTCCTTGTTGCTCTAACAGTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp ACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGACAGTCAGGTTGGCAGTGTaGGCTGAGAGGGCATCGTCA +
Preference number: 3 (lower is better)
Translates to: TSPLVTQPPEVALSIGMTVRLAV*AERASS
Trigger: TGACGATGCCCTCTCAGCCAACACTGCCAACCTGAC...TGTCATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CAA 90 bp AAGACAAGCCCTTTAGTCACCCAGCCACCTGAAGTGGCGCTGTCAATCGGGATGGTCAGGTTGGCAGTGTaGGCTGAGAGGGCATCGTCA +
Preference number: 3 (lower is better)
Translates to: KTSPLVTQPPEVALSIGMVRLAV*AERASS
Trigger: TGACGATGCCCTCTCAGCCAACACTGCCAACCTGAC...CATCCCGATTGACAGCGCCACTTCAGGTGGCTGGGTGACTAAAGGGCTTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR-3UTR CAA 90 bp TCGGAGCTTCCGAGGACATATGCCCTTCAAGATGCCTGTCCCGCTGCCCCCTGTAGGGGCTTGAAGAAGTaGAGCTCTAAGGCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: SELPRTYALQDACPAAPCRGLKK*SSKASS
Trigger: GGAAGAAGCCTTAGAGCTCAACTTCTTCAAGCCCCT...ACAGGGGGCAGCGGGACAGGCATCTTGAAGGGCATATGTCCTCGGAAGCTCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CAA 90 bp ACCTGTTCATGTCTGGTGTTCCTGCCGGGCCTAGGACTGCTCTCAAGTGGCGGAATTTCTATCCAGTTCTaGCCGGTGAGGTGGAGCGTG +
Preference number: 3 (lower is better)
Translates to: TCSCLVFLPGLGLLSSGGISIQF*PVRWSV
Trigger: CACGCTCCACCTCACCGGCAAGAACTGGATAGAAAT...TCCGCCACTTGAGAGCAGTCCTAGGCCCGGCAGGAACACCAGACATGAACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 72 bp CAGTGGTCTGATGAAGCCCTAGCATTTGCCAAGCTGTaGGCCTCTCTAAGCTGTGCAGGCCCTGGATGGGAC +
Preference number: 3 (lower is better)
Translates to: QWSDEALAFAKL*ASLSCAGPGWD
Trigger: GTCCCATCCAGGGCCTGCACAGCTTAGAGAGGCTCACAGCTTGGCAAATGCTAGGGCTTCATCAGACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp TCCCAGGGGGCTTTCAAGGGACCCTTACAGAAGAACTaGTCTGTGGGGTGTGAGGTGCATGAGACGTCGCCA +
Preference number: 3 (lower is better)
Translates to: SQGAFKGPLQKN*SVGCEVHETSP
Trigger: TGGCGACGTCTCATGCACCTCACACCCCACAGATCAGTTCTTCTGTAAGGGTCCCTTGAAAGCCCCCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR TCA 72 bp GTGGCTGGTGGCCAAACAGGAGTAGTTGCCCAGGTCTaGGGCATTGGTTCGGGCAATGTACAGGTTCCCTGT +
Preference number: 3 (lower is better)
Translates to: VAGGQTGVVAQV*GIGSGNVQVPC
Trigger: ACAGGGAACCTGTACATTGCCCGAACCAATGCCTCAGACCTGGGCAACTACTCCTGTTTGGCCACCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 72 bp CCTAGCATTTGCCAAGCTGTGAGCCTCTCTAAGCTGTaGAGGCCCTGGATGGGACGGGTAAGTTGGAGGAGT +
Preference number: 3 (lower is better)
Translates to: PSICQAVSLSKL*RPWMGRVSWRS
Trigger: ACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTTAGAGAGGCTCACAGCTTGGCAAATGCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 72 bp GGTGTGAGGTGCATGAGACGTCGCCAGCCACAAACATaGAGAGAGGATGTGTGTCCCTGGAGCCTAATACCC +
Preference number: 3 (lower is better)
Translates to: GVRCMRRRQPQT*REDVCPWSLIP
Trigger: GGGTATTAGGCTCCAGGGACACACATCCTCTCTGCATGTTTGTGGCTGGCGACGTCTCATGCACCTCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR GCA 72 bp GTTTGCAGGATTGGTCCGAACCTGCTTCCACTTCCCTaGAGGTGGAGTGCGAGCTTGCAGGGTGTACTTAGC +
Preference number: 3 (lower is better)
Translates to: VCRIGPNLLPLP*RWSASLQGVLS
Trigger: GCTAAGTACACCCTGCAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAGGTTCGGACCAATCCTGCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
3UTR CCA 72 bp CGCCAGCCACAAACATGCAGAGAGGATGTGTGTCCCTaGAGCCTAATACCCTTACTGGGGCAGTGTGGACCA +
Preference number: 3 (lower is better)
Translates to: RQPQTCREDVCP*SLIPLLGQCGP
Trigger: TGGTCCACACTGCCCCAGTAAGGGTATTAGGCTCCAGGGACACACATCCTCTCTGCATGTTTGTGGCTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 72 bp TCCGTGGACTCCTCTGGGAATAGCACACTGAGGGGCTaGTCTTCAAAGACAGGCCCGAAGGTGGTTTGGGAT +
Preference number: 3 (lower is better)
Translates to: SVDSSGNSTLRG*SSKTGPKVVWD
Trigger: ATCCCAAACCACCTTCGGGCCTGTCTTTGAAGACCAGCCCCTCAGTGTGCTATTCCCAGAGGAGTCCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 72 bp TGGCCAAACAGGAGTAGTTGCCCAGGTCTGAGGCATTaGTTCGGGCAATGTACAGGTTCCCTGTGGTCTGGG +
Preference number: 3 (lower is better)
Translates to: WPNRSSCPGLRH*FGQCTGSLWSG
Trigger: CCCAGACCACAGGGAACCTGTACATTGCCCGAACCAATGCCTCAGACCTGGGCAACTACTCCTGTTTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 72 bp GCTCTTGGTCCCAGGGCTTGCCCTTCTTCCTTAGACTaGAGGATGGTGAGGTGTGCACTTCGCTCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: ALGPRACPSSLD*RMVRCALRSSS
Trigger: AGAACTGGAGCGAAGTGCACACCTCACCATCCTTCAGTCTAAGGAAGAAGGGCAAGCCCTGGGACCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
3UTR GCA 72 bp GAAACCTCCCAATACCAGGACACACAGCATGAATGCTaGATTCCCCTCCCAGGCAGGAGTGAGTCAGTGCTG +
Preference number: 3 (lower is better)
Translates to: ETSQYQDTQHEC*IPLPGRSESVL
Trigger: CAGCACTGACTCACTCCTGCCTGGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGGTATTGGGAGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
3UTR GCA 72 bp CGGATCTCATACCCCAGGAGGATACCATTCATGTCCTaGTGCACGGGTTCCCAGGTCACGTTCATCTCTGAG +
Preference number: 3 (lower is better)
Translates to: RISYPRRIPFMS*CTGSQVTFISE
Trigger: CTCAGAGATGAACGTGACCTGGGAACCCGTGCAGCAGGACATGAATGGTATCCTCCTGGGGTATGAGATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR GCA 72 bp GGGGACCTGGCGGACAGAGGCTGTCACATGGAGAGGTaGATAGATCTCCCAGCACTAGGCTTTGAAAACTTC +
Preference number: 3 (lower is better)
Translates to: GDLADRGCHMER*IDLPALGFENF
Trigger: GAAGTTTTCAAAGCCTAGTGCTGGGAGATCTATGCACCTCTCCATGTGACAGCCTCTGTCCGCCAGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR CCA 72 bp ACTTGTCTCCCTAGGCCCTGGAGAGGTGCCTACAGTTaGTTCCTTTTCCTAGTCCCCAGGGTGTTTACTGGC +
Preference number: 3 (lower is better)
Translates to: TCLPRPWRGAYS*FLFLVPRVFTG
Trigger: GCCAGTAAACACCCTGGGGACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAGACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 72 bp GGGCTTTCAAGGGACCCTTACAGAAGAACTGATCTGTaGGGTGTGAGGTGCATGAGACGTCGCCAGCCACAA +
Preference number: 3 (lower is better)
Translates to: GLSRDPYRRTDL*GVRCMRRRQPQ
Trigger: TTGTGGCTGGCGACGTCTCATGCACCTCACACCCCACAGATCAGTTCTTCTGTAAGGGTCCCTTGAAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR CCA 72 bp AGCCTTCATGAGCTTTCACTGGGTCTCGCTCCTCCTTaGAGAATTCCTGCAGAAAGCCGAAGCGGAGGATGG +
Preference number: 3 (lower is better)
Translates to: SLHELSLGLAPP*RIPAESRSGGW
Trigger: CCATCCTCCGCTTCGGCTTTCTGCAGGAATTCTCCAAGGAGGAGCGAGACCCAGTGAAAGCTCATGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532366.2
3UTR CCA 72 bp AGCCTTCATGAGCTTTCACTGGGTCTCGCTCCTCCTTaGAGAATTCCTGCAGAACTGGAGGCAGAGACCAGG +
Preference number: 3 (lower is better)
Translates to: SLHELSLGLAPP*RIPAELEAETR
Trigger: CCTGGTCTCTGCCTCCAGTTCTGCAGGAATTCTCCAAGGAGGAGCGAGACCCAGTGAAAGCTCATGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CAA 90 bp CTCCCTAGGCCCTGGAGAGGTGCCTACAGTTGGTTCCTTTTCCTAGTCCCCAGGAGTCAGCCCTCCATGTaGAAGTTTGGTAGAAGCTCT +
Preference number: 3 (lower is better)
Translates to: LPRPWRGAYSWFLFLVPRSQPSM*KFGRSS
Trigger: AGAGCTTCTACCAAACTTCAACATGGAGGGCTGACT...CCTGGGGACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp CCTGTCTTCCCAAAGCCTATGACCATATACACAAGTCCACGGGTGTTCCGCAGCCCAGTGGCCACAGGTTaGAGGATACTGTGTCTCCCA +
Preference number: 3 (lower is better)
Translates to: PVFPKPMTIYTSPRVFRSPVATG*RILCLP
Trigger: TGGGAGACACAGTATCCTCAAACCTGTGGCCACTGG...GCTGCGGAACACCCGTGGACTTGTGTATATGGTCATAGGCTTTGGGAAGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp GTTTGGACTCCCTGTCAGGGAGAATGGTCGTATAGCTaGGCCCCTAGCACCCTTGCTTGTAAGGGTTGGGAA +
Preference number: 3 (lower is better)
Translates to: VWTPCQGEWSYS*APSTLACKGWE
Trigger: TTCCCAACCCTTACAAGCAAGGGTGCTAGGGGCTCAGCTATACGACCATTCTCCCTGACAGGGAGTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp TGGGATGAGCACTGGGCTGTAACCAGAATTCCTAGATaGGCCCCCTTAATGGCTTCCCATAAGGTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: WDEHWAVTRIPR*APLMASHKVQG
Trigger: GCCCTGCACCTTATGGGAAGCCATTAAGGGGGCTCATCTAGGAATTCTGGTTACAGCCCAGTGCTCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp GACCACAGGGTCCCACTTAATGCTAAGACTAGAGCTTaGGAAAGTCCAGGAGATGTTGCCAGGAGGTCGCCG +
Preference number: 3 (lower is better)
Translates to: DHRVPLNAKTRA*ESPGDVARRSP
Trigger: CGGCGACCTCCTGGCAACATCTCCTGGACTTTCTCAAGCTCTAGTCTTAGCATTAAGTGGGACCCTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR TCA 72 bp GCAAAGAGCCGGGTATCTTCAGCAGCCAGGTTGAGCTaGGCAAACTTGCTGAAGACGCTCTTGGTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: AKSRVSSAARLS*ANLLKTLLVEK
Trigger: CTTCTCCACCAAGAGCGTCTTCAGCAAGTTTGCTCAGCTCAACCTGGCTGCTGAAGATACCCGGCTCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 72 bp GAGTCTCATCTCTGGATGGACACTTGGACCATCTCCTaGCCCTCCAGTCACAGCTTCACCTTTCCCAAATCC +
Preference number: 3 (lower is better)
Translates to: ESHLWMDTWTIS*PSSHSFTFPKS
Trigger: GGATTTGGGAAAGGTGAAGCTGTGACTGGAGGGGCAGGAGATGGTCCAAGTGTCCATCCAGAGATGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 72 bp TATACACAAGTCCACGGGTGTTCCGCAGCTACCAGGTaGCTGTTTCCATGGAGCTTTTTGGGGGCACACAGA +
Preference number: 3 (lower is better)
Translates to: YTQVHGCSAATR*LFPWSFLGAHR
Trigger: TCTGTGTGCCCCCAAAAAGCTCCATGGAAACAGGCACCTGGTAGCTGCGGAACACCCGTGGACTTGTGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 72 bp GACCCTTACAGAAGAACTGATCTGTGGGGTGTGAGGTaGATGAGACGTCGCCAGCCACAAACATGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: DPYRRTDLWGVR*MRRRQPQTCRE
Trigger: CTCTCTGCATGTTTGTGGCTGGCGACGTCTCATGCACCTCACACCCCACAGATCAGTTCTTCTGTAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR GCA 72 bp AGAAGTCCATGTGGCTGGTGGCCAAACAGGAGTAGTTaGCCAGGTCTGAGGCATTGGTTCGGGCAATGTACA +
Preference number: 3 (lower is better)
Translates to: RSPCGWWPNRSS*PGLRHWFGQCT
Trigger: TGTACATTGCCCGAACCAATGCCTCAGACCTGGGCAACTACTCCTGTTTGGCCACCAGCCACATGGACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR CCA 72 bp GGCACTGGGATTTCTATCCAGTTCTTGCCGGTGAGGTaGAGCGTGGGAGTCAGGTGTAAGTCATTCTGGTAC +
Preference number: 3 (lower is better)
Translates to: GTGISIQFLPVR*SVGVRCKSFWY
Trigger: GTACCAGAATGACTTACACCTGACTCCCACGCTCCACCTCACCGGCAAGAACTGGATAGAAATCCCAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp AAGCTGTGCAGGCCCTGGATGGGACGGGTAAGTTGGAGGAGTCTTGGGGCCGAGGCAGGAACATTTATTTaGTTGTCGTTCTATCCCTCA +
Preference number: 3 (lower is better)
Translates to: KLCRPWMGRVSWRSLGAEAGTFI*LSFYPS
Trigger: TGAGGGATAGAACGACAACAAAATAAATGTTCCTGC...CTCGGCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp TGTCTCCCACCAATGAGCCAGTTGGCAGTCCCATTCTaGGACCAGGCAGAGAAAAGATTCCTCTGTAGCTGG +
Preference number: 3 (lower is better)
Translates to: CLPPMSQLAVPF*DQAEKRFLCSW
Trigger: CCAGCTACAGAGGAATCTTTTCTCTGCCTGGTCTCAGAATGGGACTGCCAACTGGCTCATTGGTGGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp CTTCAGGCACTGGGATTTCTATCCAGTTCTTGCCGGTaGGGTGGAGCGTGGGAGTCAGGTGTAAGTCATTCT +
Preference number: 3 (lower is better)
Translates to: LQALGFLSSSCR*GGAWESGVSHS
Trigger: AGAATGACTTACACCTGACTCCCACGCTCCACCTCACCGGCAAGAACTGGATAGAAATCCCAGTGCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR GCA 72 bp ATCTCATACCCCAGGAGGATACCATTCATGTCCTGCTaGACGGGTTCCCAGGTCACGTTCATCTCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: ISYPRRIPFMSC*TGSQVTFISED
Trigger: ATCCTCAGAGATGAACGTGACCTGGGAACCCGTGCAGCAGGACATGAATGGTATCCTCCTGGGGTATGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
3UTR CCA 72 bp GTATGCAGAAGAGAGGACACTTGTCTCCCTAGGCCCTaGAGAGGTGCCTACAGTTGGTTCCTTTTCCTAGTC +
Preference number: 3 (lower is better)
Translates to: VCRREDTCLPRP*RGAYSWFLFLV
Trigger: GACTAGGAAAAGGAACCAACTGTAGGCACCTCTCCAGGGCCTAGGGAGACAAGTGTCCTCTCTTCTGCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CCA 72 bp CCTGCCTGTGCTCTGCTTGGACCTGCCTTAAGATCTTaGCCTAATTTTTCCCTCCTCCTGGGACTGGATGAA +
Preference number: 3 (lower is better)
Translates to: PACALLGPALRS*PNFSLLLGLDE
Trigger: TTCATCCAGTCCCAGGAGGAGGGAAAAATTAGGCCAAGATCTTAAGGCAGGTCCAAGCAGAGCACAGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331830.7
3UTR-3UTR CAA 90 bp CACACCTTGGACGGGAACCCAGCCATGCCAATCCCCATGATCACCAATCCGAACTGTAAAGTGAGGGGCTaGAAGAAGTTGAGCTCTAAG +
Preference number: 3 (lower is better)
Translates to: HTLDGNPAMPIPMITNPNCKVRG*KKLSSK
Trigger: CTTAGAGCTCAACTTCTTCAAGCCCCTCACTTTACA...GTTCGGATTGGTGATCATGGGGATTGGCATGGCTGGGTTCCCGTCCAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR-3UTR CAA 90 bp CTACAGTTGGTTCCTTTTCCTAGTCCCCAGGGTGTTTACTGGCCACTAAGCTGTGATGCTAGGCCAAGTTaGGACTCCCTGTCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: LQLVPFPSPQGVYWPLSCDARPS*DSLSGR
Trigger: TCTCCCTGACAGGGAGTCCAAACTTGGCCTAGCATC...ACAGCTTAGTGGCCAGTAAACACCCTGGGGACTAGGAAAAGGAACCAACTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp ATTCTGGTACAGCATCTTATAGCCGGTGACTGCAGACTCATTTCGGAAAGGGACTCCGTCGGGATGAAGTaGGGGAACTCGTTGAGGAGC +
Preference number: 3 (lower is better)
Translates to: ILVQHLIAGDCRLISERDSVGMK*GNSLRS
Trigger: GCTCCTCAACGAGTTCCCCAACTTCATCCCGACGGA...GTCCCTTTCCGAAATGAGTCTGCAGTCACCGGCTATAAGATGCTGTACCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CAA 90 bp CGTGGGTTCTATCCTGCGGCAGAATATAAAATATCCTACCTCCTACAAAAAGGGACAGCGTCAGGGTCCTaGCTGCTGCTCGAGGGAGAA +
Preference number: 3 (lower is better)
Translates to: RGFYPAAEYKISYLLQKGTASGS*LLLEGE
Trigger: TTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGT...CCCTTTTTGTAGGAGGTAGGATATTTTATATTCTGCCGCAGGATAGAACCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 72 bp GCCACTCCCTGGCACCATTTGTATCATTTGTTGCCCTaGATGAAAGCAGATAACCTGACCTTGCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: ATPWHHLYHLLP*MKADNLTLLGP
Trigger: AGGGCCCAGCAAGGTCAGGTTATCTGCTTTCATTCAGGGCAACAAATGATACAAATGGTGCCAGGGAGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR GCA 72 bp AATCACCTTCTTAGCCAGGCCATAGCCATTCAGCAGTaGCTCCTTCCTCTGGGTAGACAAACAGCCTTGAAC +
Preference number: 3 (lower is better)
Translates to: NHLLSQAIAIQQ*LLPLGRQTALN
Trigger: GTTCAAGGCTGTTTGTCTACCCAGAGGAAGGAGGCACTGCTGAATGGCTATGGCCTGGCTAAGAAGGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR CCA 72 bp AAATGCCATAAAGTTCAAGATGCTGGGGCCTCAGAATaGAAGCAGTTCTACCTCCCAGGGGGCTTTCAAGGG +
Preference number: 3 (lower is better)
Translates to: KCHKVQDAGASE*KQFYLPGGFQG
Trigger: CCCTTGAAAGCCCCCTGGGAGGTAGAACTGCTTCCATTCTGAGGCCCCAGCATCTTGAACTTTATGGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CAA 90 bp GTCAGGTTGTCACCCAAGTTGATGTCGGCACTTGAGGGGGCTAGAGTGATTTTGGAGGGAGACAGGAAATaGACAGTGCAAGGTAGCAAA +
Preference number: 3 (lower is better)
Translates to: VRLSPKLMSALEGARVILEGDRK*TVQGSK
Trigger: TTTGCTACCTTGCACTGTCAATTTCCTGTCTCCCTC...CAAAATCACTCTAGCCCCCTCAAGTGCCGACATCAACTTGGGTGACAACCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR-3UTR CAA 90 bp AATTTGAATTTAAATAGGCTGGGCAGGCCCCATCTGGCCATACTAGTTCAATCAGAGGATGAGACCCCTTaGGCCCACACCTTGGTAGGG +
Preference number: 3 (lower is better)
Translates to: NLNLNRLGRPHLAILVQSEDETP*AHTLVG
Trigger: CCCTACCAAGGTGTGGGCCAAAGGGGTCTCATCCTC...TGATTGAACTAGTATGGCCAGATGGGGCCTGCCCAGCCTATTTAAATTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR TCA 72 bp TTGAGCTCTAAGGCTTCTTCCAGCTCTGACGTTCTGTaGCTGGTAGTATACCCAGAGCTCAGGAAAGGATGG +
Preference number: 3 (lower is better)
Translates to: LSSKASSSSDVL*LVVYPELRKGW
Trigger: CCATCCTTTCCTGAGCTCTGGGTATACTACCAGTCACAGAACGTCAGAGCTGGAAGAAGCCTTAGAGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR TCA 72 bp AGCAGTGCCTCCTTCCTCTGGGTAGACAAACAGCCTTaGACAGAAAGGTGGAAGACTCGAGTTCTTAACCCA +
Preference number: 3 (lower is better)
Translates to: SSASFLWVDKQP*TERWKTRVLNP
Trigger: TGGGTTAAGAACTCGAGTCTTCCACCTTTCTGTTCAAGGCTGTTTGTCTACCCAGAGGAAGGAGGCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
3UTR TCA 72 bp CAAGGGGCTTGCGGTCCAAGGAGGGAGACAGGAAATTaGCAGTGCAAGGTAGCAAATGCCATAAAGTTCAAG +
Preference number: 3 (lower is better)
Translates to: QGACGPRRETGN*QCKVANAIKFK
Trigger: CTTGAACTTTATGGCATTTGCTACCTTGCACTGTCAATTTCCTGTCTCCCTCCTTGGACCGCAAGCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR GCA 72 bp AAAAGCCTCTGGAGTGAAGAACAGGACAAGGAGGTATaGTTTAGCCTGATGATAACACCCACAGCTCGTGCC +
Preference number: 3 (lower is better)
Translates to: KSLWSEEQDKEV*FSLMITPTARA
Trigger: GGCACGAGCTGTGGGTGTTATCATCAGGCTAAAGCATACCTCCTTGTCCTGTTCTTCACTCCAGAGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331830.7
3UTR CCA 72 bp TGCAGGGCCACAGAAGGTGGGATCTCCAAGACTTCCTaGGCTGAACACTTTGATTCTAAGAGTCTCATCTCT +
Preference number: 3 (lower is better)
Translates to: CRATEGGISKTS*AEHFDSKSLIS
Trigger: AGAGATGAGACTCTTAGAATCAAAGTGTTCAGCCCAGGAAGTCTTGGAGATCCCACCTTCTGTGGCCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp GCGTCAGTGTCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATGTCAGGTTGGCAGTGTaGGCTGAGAGGGCATCGTCA +
Preference number: 3 (lower is better)
Translates to: ASVSSWKLLPGASQFKENVRLAV*AERASS
Trigger: TGACGATGCCCTCTCAGCCAACACTGCCAACCTGAC...ATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR TCA 72 bp CTCATTTTCCTTTACGTCCTGTCTTCCCAAAGCCTATaGCCATATACACAAGTCCACGGGTGTTCCGCAGCT +
Preference number: 3 (lower is better)
Translates to: LIFLYVLSSQSL*PYTQVHGCSAA
Trigger: AGCTGCGGAACACCCGTGGACTTGTGTATATGGTCATAGGCTTTGGGAAGACAGGACGTAAAGGAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp CATGGAGAGGTGCATAGATCTCCCAGCACTAGGCTTTaGAAACTTCAGGGCTCAGTAAAGCACTCCTGTCTT +
Preference number: 3 (lower is better)
Translates to: HGEVHRSPSTRL*KLQGSVKHSCL
Trigger: AAGACAGGAGTGCTTTACTGAGCCCTGAAGTTTTCAAAGCCTAGTGCTGGGAGATCTATGCACCTCTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639843.1
3UTR GCA 72 bp GAGGGAGACAGGAAATTGACAGTGCAAGGTAGCAAATaGCATAAAGTTCAAGATGCTGGGGCCTCAGAATGG +
Preference number: 3 (lower is better)
Translates to: EGDRKLTVQGSK*HKVQDAGASEW
Trigger: CCATTCTGAGGCCCCAGCATCTTGAACTTTATGGCATTTGCTACCTTGCACTGTCAATTTCCTGTCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
3UTR-3UTR CAA 90 bp CGTCAGTGTCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATCACATGGTACTTGGTGTaGGGATGCAGGCCGCTGACT +
Preference number: 3 (lower is better)
Translates to: RQCHHGSYCLVPLNLKKITWYLV*GCRPLT
Trigger: AGTCAGCGGCCTGCATCCCAACACCAAGTACCATGT...GATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp GCGTCAGTGTCATCATGGAAGTTACTGCCTGGTGCCTCTCAATTTAAAGAAAATCCCTGTGGTCCGAATTaGTACCAGGGCATGGCCAAT +
Preference number: 3 (lower is better)
Translates to: ASVSSWKLLPGASQFKENPCGPN*YQGMAN
Trigger: ATTGGCCATGCCCTGGTACAAATTCGGACCACAGGG...ATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR-3UTR CAA 90 bp CAAGCTCATGTACAAGTCACTCTAGCAGGAGGCTGTTGCATTTTACAAGCTTGCAGTCAGCCCTCCATGTaGAAGTTTGGTAGAAGCTCT +
Preference number: 3 (lower is better)
Translates to: QAHVQVTLAGGCCILQACSQPSM*KFGRSS
Trigger: AGAGCTTCTACCAAACTTCAACATGGAGGGCTGACT...GCAAGCTTGTAAAATGCAACAGCCTCCTGCTAGAGTGACTTGTACATGAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp GCACAGATAGGATTCCAGTGCTGTTGGCTTTGCCCATaGAGTTCTCAGCAAAGCAGGTGTATTTGCCTTCAT +
Preference number: 3 (lower is better)
Translates to: AQIGFQCCWLCP*SSQQSRCICLH
Trigger: ATGAAGGCAAATACACCTGCTTTGCTGAGAACTTCATGGGCAAAGCCAACAGCACTGGAATCCTATCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 72 bp CAAGCTCATGTACAAGTCACTCTAGCAGGAGGCTGTTaGATTTTACAAGCTTGCATGTCCTCAGGTCACCTA +
Preference number: 3 (lower is better)
Translates to: QAHVQVTLAGGC*ILQACMSSGHL
Trigger: TAGGTGACCTGAGGACATGCAAGCTTGTAAAATGCAACAGCCTCCTGCTAGAGTGACTTGTACATGAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp GAAGTTCTCAGCAAAGCAGGTGTATTTGCCTTCATCTaGCCGGCTGATGTTTCTTATGATCAAGGTGCCATC +
Preference number: 3 (lower is better)
Translates to: EVLSKAGVFAFI*PADVSYDQGAI
Trigger: GATGGCACCTTGATCATAAGAAACATCAGCCGGTCAGATGAAGGCAAATACACCTGCTTTGCTGAGAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
3UTR GCA 72 bp CTCAGGTATAGGCGTCAGTGTCATCATGGAAGTTACTaGCTGGTGCCTCTCAATTTAAAGAAAATCCTTGCG +
Preference number: 3 (lower is better)
Translates to: LRYRRQCHHGSY*LVPLNLKKILA
Trigger: CGCAAGGATTTTCTTTAAATTGAGAGGCACCAGGCAGTAACTTCCATGATGACACTGACGCCTATACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
3UTR CCA 72 bp TTAGCATTAAGGTACTTACTTGTGAGTAACTATCGTTaGCCTGAAGCAAGTTTAGTGGCTGTAGCCTCTAGC +
Preference number: 3 (lower is better)
Translates to: LALRYLLVSNYR*PEASLVAVASS
Trigger: GCTAGAGGCTACAGCCACTAAACTTGCTTCAGGCCAACGATAGTTACTCACAAGTAAGTACCTTAATGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR-3UTR CAA 90 bp AACATTTATTTTGTTGTCGTTCTATCCCTCAAACAAATTCTGCCTGCCCAGTGGTGTAAAGTGAGGGGCTaGAAGAAGTTGAGCTCTAAG +
Preference number: 3 (lower is better)
Translates to: NIYFVVVLSLKQILPAQWCKVRG*KKLSSK
Trigger: CTTAGAGCTCAACTTCTTCAAGCCCCTCACTTTACA...CCACTGGGCAGGCAGAATTTGTTTGAGGGATAGAACGACAACAAAATAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR TCA 72 bp CCTATTGTCTTATTAAACCTTAGTCAGTACTCTACCTaGAATCTCAGGCTGCAGGAACATTTATTTTGTTGT +
Preference number: 3 (lower is better)
Translates to: PIVLLNLSQYST*NLRLQEHLFCC
Trigger: ACAACAAAATAAATGTTCCTGCAGCCTGAGATTTCAGGTAGAGTACTGACTAAGGTTTAATAAGACAATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
CDS-3UTR CCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTCCACCGATAGGTGGCTaGAGGGCTGGCCCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGPPIGG*RAGPGA
Trigger: CGCGCCCGGGCCAGCCCTCCAGCCACCTATCGGTGG...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp AGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGCCACCGATAGGTGGCTaGAGGGCTGGCCCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RKGLAVSVGGGVQLRRRGPPIGG*RAGPGA
Trigger: CGCGCCCGGGCCAGCCCTCCAGCCACCTATCGGTGG...CCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCCACCGATAGGTGGCTaGAGGGCTGGCCCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGPPIGG*RAGPGA
Trigger: CGCGCCCGGGCCAGCCCTCCAGCCACCTATCGGTGG...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGACCTCCTGGGGGACCTaGCGGACCTCGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: GAGCVRRRWRPAAAQREGTSWGT*RTSDQD
Trigger: GTCCTGGTCCGAGGTCCGCCAGGTCCCCCAGGAGGT...CCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCTCCTCCGCTGAGTCCTaGGGGTGCCACCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPSSAES*GCHRGG
Trigger: GCCCCCTCGGTGGCACCCTCAGGACTCAGCGGAGGA...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GCTGCAGGTCGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: AAGRGGRADCRQHWRGGRGWQAQ*QPGCRP
Trigger: GGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCC...GCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTACCTCCACCCGGTTCTaGGAGGCCAGAGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGTSTRF*EARGSP
Trigger: CGGGGAGCCTCTGGCCTCCCAGAACCGGGTGGAGGT...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTAGTCCATCCAGGGGGTaGGGCCCAGCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGSPSRG*GPAPVQ
Trigger: CTGCACAGGTGCTGGGCCTCACCCCCTGGATGGACT...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCCCGGGCGCGGCATaGCAGCAACACCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ARRSPRRGLHGRGVGRRAGPGAA*QQHLLL
Trigger: GAGGAGCAGGTGTTGCTGGCATGCCGCGCCCGGGCC...AGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639971.1
ENST00000640352.1
CDS-3UTR GCA 90 bp AGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGTCCTCAGCCTCCCCCTaGACCCTGCGCCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RKGLAVSVGGGVQLRRRGSSASP*TLRPSL
Trigger: CAGGGAAGGGCGCAGGGTGCAGGGGGAGGCTGAGGA...CCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638577.1
CDS-3UTR CCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCTGTCCTTTGGGCCCTaGCGGCCTCAGCCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVLSFGP*RPQPLA
Trigger: AGCGAGCGGCTGAGGCCGCCAGGGCCCAAAGGACAG...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331830.7
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp TCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCAGGTGGCTGGAGGGCTaGCCCGGGCGCGGCATGCCA +
Preference number: 4 (lower is better)
Translates to: SGHLGSRKGLAVSVGGGVRWLEG*PGRGMP
Trigger: TGGCATGCCGCGCCCGGGCCAGCCCTCCAGCCACCT...GACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCTCTTCCACCGATAGGTaGCTGGAGGGCTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRRSSTDR*LEGWPG
Trigger: CCCGGGCCAGCCCTCCAGCCACCTATCGGTGGAAGA...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTGGGTGGGCTCAGCTGTaGTCCACTGCGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVGWAQL*STAGTG
Trigger: CCCTGTCCCCGCAGTGGACCACAGCTGAGCCCACCC...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCGGGTGGGCTCAGCTGTaGTCCACTGCGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPGWAQL*STAGTG
Trigger: CCCTGTCCCCGCAGTGGACCACAGCTGAGCCCACCC...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGGCCAGGGTGTGGTGCTaGGCGGACTGCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: GAGCVRRRWRPAAAQREGARVWC*ADCHVL
Trigger: GAGAACATGGCAGTCCGCCCAGCACCACACCCTGGC...CCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTGACGGTGCCAGGGTGTaGTGCTGGGCGGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGDGARV*CWADCH
Trigger: ATGGCAGTCCGCCCAGCACCACACCCTGGCACCGTC...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGGCTCTGCCCACACCTTaGACGGGAACCCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: GAGCVRRRWRPAAAQREGALPTP*TGTQPC
Trigger: GCATGGCTGGGTTCCCGTCCAAGGTGTGGGCAGAGC...CCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000640326.1
CDS-3UTR CCA 90 bp AAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCCAGCTGCAGGCCTaGGAGCGGACGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KGLRLPASGIGALVLSRLGQLQA*ERTAGW
Trigger: CCACCCAGCCGTCCGCTCCCAGGCCTGCAGCTGGCC...CAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636312.2
ENST00000638577.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCGGATGGCCTCCCTGCTaGCAACGGTGCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPGWPPC*QRCPLG
Trigger: ACCCAGTGGGCACCGTTGTCAGCAGGGAGGCCATCC...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGGTCTGGGACACGAAGTaGCGCCCGTCCGTCGGGATG +
Preference number: 4 (lower is better)
Translates to: AVSVGGGVQLRRRGRGSRVWDTK*RPSVGM
Trigger: CATCCCGACGGACGGGCGTCACTTCGTGTCCCAGAC...CCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCGCTGAGCCTGCACGATaGTGCGGCCCTGCACGGTGT +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPAEPAR*CGPARC
Trigger: ACACCGTGCAGGGCCGCATCATCGTGCAGGCTCAGC...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp AAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGTCCTCCGCTGAGTCCTaGGGGTGCCACCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KGLRLPASGIGALVLSRLSSAES*GCHRGG
Trigger: GCCCCCTCGGTGGCACCCTCAGGACTCAGCGGAGGA...CAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTTCCTCCGCTGAGTCCTaGGGGTGCCACCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: EGAQAPSLRHRGAGSQPLSSAES*GCHRGG
Trigger: GCCCCCTCGGTGGCACCCTCAGGACTCAGCGGAGGA...AAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGTCAGCTGTGGTCCACTaGGGGGACAGGGAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: AVSVGGGVQLRRRGRGSRSAVVH*GDREPS
Trigger: GGACGGCTCCCTGTCCCCGCAGTGGACCACAGCTGA...CCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGGGCTTGCCGGCGGCTaGACAGCCCCAACGCAGGTT +
Preference number: 4 (lower is better)
Translates to: EVAAEGASWSWRWQKGWQGLAGG*TAPTQV
Trigger: AACCTGCGTTGGGGCTGTGCAGCCGCCGGCAAGCCC...CTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639971.1
ENST00000640352.1
CDS-3UTR GCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCGAGGCCCAGCACCTGTaGAGTCTCGGCATTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRREAQHL*SLGIAL
Trigger: GAGGGCAATGCCGAGACTGCACAGGTGCTGGGCCTC...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCGGTCTGCCAGTGAGTaGTGCCCTGCCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVRSASE*CPACGR
Trigger: CCTTCCGCAGGCAGGGCAGCACTCACTGGCAGACCG...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639302.1
ENST00000639843.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: EGAQAPSLRHRGAGSQPLGWQAQ*QPGCRP
Trigger: GGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCC...AAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp TTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCAGCAGAGTCTGGGGCTaGAGGTCGGGGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LAAGRGWLCPSEVASSCGSRVWG*RSGRPS
Trigger: GCTCGGCCTCCCCGACCTGCAGCCCCAGACTCTGCT...GCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGTCCTCAGCCTCCCCCTaGACCCTGCGCCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AEGAQAPSLRHRGAGSQPSSASP*TLRPSL
Trigger: CAGGGAAGGGCGCAGGGTGCAGGGGGAGGCTGAGGA...CGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636312.2
ENST00000638577.1
CDS-3UTR CCA 90 bp CTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCTCTTCCACCGATAGGTaGCTGGAGGGCTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LAVSVGGGVQLRRRGRGSSSTDR*LEGWPG
Trigger: CCCGGGCCAGCCCTCCAGCCACCTATCGGTGGAAGA...GGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCTCTTCCACCGATAGGTaGCTGGAGGGCTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GLRLPASGIGALVLSRLGSSTDR*LEGWPG
Trigger: CCCGGGCCAGCCCTCCAGCCACCTATCGGTGGAAGA...GCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTGGGGATCTGCAGGGTaGGCTCAGCTGTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: GAGCVRRRWRPAAAQREGWGSAG*AQLWST
Trigger: AGTGGACCACAGCTGAGCCCACCCTGCAGATCCCCA...CCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GCTGCAGGTCGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCGGACTGTGGCCTCCTTaGACGCGCTGTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: AAGRGGRADCRQHWRGGRGLWPP*TRCPPP
Trigger: CGGTGGTGGACAGCGCGTCCAAGGAGGCCACAGTCC...GCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp CTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGAACCTCCTGGGGGACCTaGCGGACCTCGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: LCPSEVASSCGAEGGVPGTSWGT*RTSDQD
Trigger: GTCCTGGTCCGAGGTCCGCCAGGTCCCCCAGGAGGT...TCCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCCAGGCATCGGGGCGCTaGTTCTCAGCCGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLRLPASGIGALVLSRLGQASGR*FSAAWA
Trigger: TGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTG...GCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGCAGGCATCGGGGCGCTaGTTCTCAGCCGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AVSVGGGVQLRRRGRGSRQASGR*FSAAWA
Trigger: TGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTG...CCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCCCACAGGCATCGGGGCGCTaGTTCTCAGCCGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RRGGGFMVVALAEGLAGPQASGR*FSAAWA
Trigger: TGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTG...TGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCCTGGGAACCGGGCCTTaGTGCTGGGTGCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPLGTGP*CWVQRA
Trigger: GGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCAG...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGCCACTTTGCGCCACTTaGTCCGGGGGACAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AVSVGGGVQLRRRGRGSRPLCAT*SGGQGS
Trigger: GGAACCCTGTCCCCCGGATCAAGTGGCGCAAAGTGG...CCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCTGAGCCTGCACGATaGTGCGGCCCTGCACGGTGT +
Preference number: 4 (lower is better)
Translates to: EVAAEGASWSWRWQKGWQAEPAR*CGPARC
Trigger: ACACCGTGCAGGGCCGCATCATCGTGCAGGCTCAGC...CTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639971.1
ENST00000640352.1
CDS-3UTR TCA 90 bp GCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGAGTCCATCCAGGGGGTaGGGCCCAGCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: AEGAQAPSLRHRGAGSQPSPSRG*GPAPVQ
Trigger: CTGCACAGGTGCTGGGCCTCACCCCCTGGATGGACT...CGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGCCACGGAGTGGGAAATaGCGGTGCCAGGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AVSVGGGVQLRRRGRGSRPRSGK*RCQGVV
Trigger: CACCACACCCTGGCACCGTCATTTCCCACTCCGTGG...CCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GCTGCAGGTCGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCCCACGGAGTGGGAAATaGCGGTGCCAGGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AAGRGGRADCRQHWRGGRPRSGK*RCQGVV
Trigger: CACCACACCCTGGCACCGTCATTTCCCACTCCGTGG...GCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp AGTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGTCCCGCTGCCCCCTGTaGAGGGCCACCTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: SVRPPWQQEGAGCVRRRWSRCPL*RATCRS
Trigger: GCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGA...CCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGACACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000640326.1
CDS-3UTR GCA 90 bp TGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGACTGGTGTCCAGCCCTaGTGTCCTCACTCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: WQQEGAGCVRRRWRPAAATGVQP*CPHSVR
Trigger: GCGGACCGAGTGAGGACAGCAGGGCTGGACACCAGT...CGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VSGHLGSRKGLAVSVGGGEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...GCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGGTCCTTGCTGCTaGTCGAGGGAGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGQGPCC*SREKAG
Trigger: TCCCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTG...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCCAGGGTCCTTGCTGCTaGTCGAGGGAGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPQGPCC*SREKAG
Trigger: TCCCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTG...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTCAGCGTCAGGGTCCTTaGTGCTGCTCGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGQRQGP*CCSREK
Trigger: CTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTG...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCCAGCGTCAGGGTCCTTaGTGCTGCTCGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRRQRQGP*CCSREK
Trigger: CTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTG...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCTCAGACCAAGGCTGGTaGCCCTTTCCACCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRRSDQGW*PFPPRA
Trigger: GGCCCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGA...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp AAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGAGCAGAGTCTGGGGCTaGAGGTCGGGGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: KGLRLPASGIGALVLSRLSRVWG*RSGRPS
Trigger: GCTCGGCCTCCCCGACCTGCAGCCCCAGACTCTGCT...CAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACTGGGCCGCTGTCCTTTaGGCCCTGGCGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGSGQVVLGIPGSRQGHWAAVL*ALAASA
Trigger: GGCTGAGGCCGCCAGGGCCCAAAGGACAGCGGCCCA...GTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp GCCTGTCCCGCTGCCCCCTGTGAAGGGCCACCTGTCGGAGCATGGGCTTTGGGGGTTGGCTGGGGCAGGTaGATGCTGCCCGAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: ACPAAPCEGPPVGAWALGVGWGR*MLPESV
Trigger: CACCGACTCGGGCAGCATCCACCTGCCCCAGCCAAC...CCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000640326.1
CDS-3UTR CCA 90 bp GCTGCAGGTCGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCGGTGTGGCTTCCTCCTaGTGGCTGTCCCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGRGGRADCRQHWRGGRGVASS*WLSPWW
Trigger: CCACCATGGGGACAGCCACCAGGAGGAAGCCACACC...GCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp GTCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGAGGTGGCTGGAGGGCTaGCCCGGGCGCGGCATGCCA +
Preference number: 4 (lower is better)
Translates to: VWERIWPGGPRYTWEQAGRWLEG*PGRGMP
Trigger: TGGCATGCCGCGCCCGGGCCAGCCCTCCAGCCACCT...CCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp CTCACGATGTGGACTTCTGCAGGGATCCCATCCCCTCCGGGCCCTGTGGTCCGACCACCGATAGGTGGCTaGAGGGCTGGCCCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: LTMWTSAGIPSPPGPVVRPPIGG*RAGPGA
Trigger: CGCGCCCGGGCCAGCCCTCCAGCCACCTATCGGTGG...TCGGACCACAGGGCCCGGAGGGGATGGGATCCCTGCAGAAGTCCACATCGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639971.1
CDS-3UTR CCA 90 bp GCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCAGGCGGTGCCCACTGGGTTaGAGGCCAGGCACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: AVSVGGGVQLRRRGRGSRRCPLG*RPGTGR
Trigger: TCTACCAGTGCCTGGCCTCCAACCCAGTGGGCACCG...CCTGGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCGGCTAGCTCGGCGCTaGCGTAGATGGTACCGTGCT +
Preference number: 4 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVRLARR*RRWYRA
Trigger: AGCACGGTACCATCTACGCCAGCGCCGAGCTAGCCG...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCGGGTCGTGGGAGGCATaGCACTGTAGGGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRRGSWEA*HCRVRL
Trigger: CAACCTGACCCTACAGTGCCATGCCTCCCACGACCC...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCATGGTGGGGTCGTaGGAGGCATGGCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGSMVGS*EAWHCR
Trigger: CCTACAGTGCCATGCCTCCCACGACCCCACCATGGA...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp AAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGCACCACCACACCTCCTaGGGGACCTGGCGGACCTCG +
Preference number: 4 (lower is better)
Translates to: KGLRLPASGIGALVLSRLHHHTS*GTWRTS
Trigger: CGAGGTCCGCCAGGTCCCCCAGGAGGTGTGGTGGTG...CAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCTCATGGTCGTGGCGTTaGCAGAAGGGCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LAVSVGGGVQLRRRGRGSSWSWR*QKGWQA
Trigger: GGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGA...GGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCTTGCCGGTGAGGTaGAGCGTGGGAGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GAGCVRRRWRPAAAQREGFLPVR*SVGVRC
Trigger: ACACCTGACTCCCACGCTCCACCTCACCGGCAAGAA...CCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCTGTGTCCGTCGGAGGTaGCGTCCAGCTGCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RGGRADCRQHWRGGRMIGCVRRR*RPAAAQ
Trigger: CTGCGCCGCAGCTGGACGCCACCTCCGACGGACACA...GCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ARRSPRRGLHGRGVGRRAAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...AGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
CDS-3UTR CCA 90 bp CGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGGCAGCAGGAAGGGGCTaGCTGTGTCCGTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RGGGFMVVALAEGLAGPVAAGRG*LCPSEV
Trigger: CACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGC...CACTGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
CDS-3UTR CCA 90 bp GCTGCAGGTCGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCAGGCGGGAGAGCTCTTaGTCCCAGGGCTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AAGRGGRADCRQHWRGGRRRESS*SQGLPF
Trigger: GAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCT...GCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCAGGCGGGAGAGCTCTTaGTCCCAGGGCTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPRRESS*SQGLPF
Trigger: GAAGGGCAAGCCCTGGGACCAAGAGCTCTCCCGCCT...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCCAGTCCAAGGCCGTCTaGGAGCGGATCTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPQSKAV*ERIWPG
Trigger: ACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTG...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTGGGCTAGGGGTGGGTaGGTAGGGTGCAGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LKGLRLPASGIGALVLSRWARGG*VGCSGG
Trigger: ACCCCCACTGCACCCTACCCACCCACCCCTAGCCCA...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
CDS-3UTR CCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGAGGCTGGCTGGCCCTTaGGGCTGCCCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGRLAGP*GCPKEA
Trigger: TGCCTCTTTAGGGCAGCCCCAAGGGCCAGCCAGCCT...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CAA 72 bp GGACCTGGCGGACCTCGGACCAGGACTGTGGCCTCCTaGGACGCGCTGTCCACCACCGTCTGGGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: GPGGPRTRTVAS*DALSTTVWAMH
Trigger: GTGCATGGCCCAGACGGTGGTGGACAGCGCGTCCAAGGAGGCCACAGTCCTGGTCCGAGGTCCGCCAGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640352.1
CDS-3UTR TCA 90 bp GCCAGGAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTCTGGGAACCGGGCCTTaGTGCTGGGTGCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: ARRSPRRGLHGRGVGRRALGTGP*CWVQRA
Trigger: GGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCAG...AGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639971.1
ENST00000640352.1
CDS-3UTR TCA 90 bp TCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCGAAGCACTCCAGGGTaGCCTGCTGCCCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SGHLGSRKGLAVSVGGGVRSTPG*PAAPPV
Trigger: CACTGGTGGGGCAGCAGGTCACCCTGGAGTGCTTCG...GACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCCACTTTGCGCCACTTaGTCCGGGGGACAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AEGAQAPSLRHRGAGSQPPLCAT*SGGQGS
Trigger: GGAACCCTGTCCCCCGGATCAAGTGGCGCAAAGTGG...CGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp CGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCCCACCTCATCCTCAAAGCTaGCGCTGGGGATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRGGGFMVVALAEGLAGPPHPQS*RWGSAG
Trigger: CCCTGCAGATCCCCAGCGTCAGCTTTGAGGATGAGG...TGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639971.1
ENST00000640352.1
CDS-3UTR TCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCTCACGGGATTCAGCCTaGAGTCAGGGGCGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRRSRDSA*SQGRVL
Trigger: AAGCACTCGCCCCTGACTTCAGGCTGAATCCCGTGA...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GGAGTTATCGGGGACAGCGTCAGGGTCCTTGCTGCTGCTCGAGGGAGAAGGCGGTCCTCCGCTGAGTCCTaGGGGTGCCACCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GVIGDSVRVLAAARGRRRSSAES*GCHRGG
Trigger: GCCCCCTCGGTGGCACCCTCAGGACTCAGCGGAGGA...CCGCCTTCTCCCTCGAGCAGCAGCAAGGACCCTGACGCTGTCCCCGATAACTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp TGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGTCCAGTTCTTGCCGGTaGGGTGGAGCGTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: WQQEGAGCVRRRWRPAAASSSCR*GGAWES
Trigger: TGACTCCCACGCTCCACCTCACCGGCAAGAACTGGA...CGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp AGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGTCCAGTTCTTGCCGGTaGGGTGGAGCGTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RKGLAVSVGGGVQLRRRGSSSCR*GGAWES
Trigger: TGACTCCCACGCTCCACCTCACCGGCAAGAACTGGA...CCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GCTGCAGGTCGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCTCCAGTTCTTGCCGGTaGGGTGGAGCGTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: AAGRGGRADCRQHWRGGRSSSCR*GGAWES
Trigger: TGACTCCCACGCTCCACCTCACCGGCAAGAACTGGA...GCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCGACCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR TCA 90 bp GCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGGGAGAGGTGGGCGCATaGTTGGCCATCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AEGAQAPSLRHRGAGSQPGEVGA*LAISCP
Trigger: TGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCC...CGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCGGAGAGGTGGGCGCATaGTTGGCCATCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LKGLRLPASGIGALVLSRGEVGA*LAISCP
Trigger: TGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCC...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTGACCTTGCTGGGCCCTaGGACTCTGTCTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVDLAGP*DSVWRE
Trigger: CTCTCTCCAGACAGAGTCTCAGGGCCCAGCAAGGTC...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331830.7
CDS-3UTR GCA 90 bp GGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCGGCCCGGGCGCGGCATaGCAGCAACACCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRADCRQHWRGGRMIGHLGPGAA*QQHLLL
Trigger: GAGGAGCAGGTGTTGCTGGCATGCCGCGCCCGGGCC...GAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR GCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCGACCCCGGCATCCTGTaGCTTGGTGGGGTTCATGAT +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRRDPGIL*LGGVHD
Trigger: ATCATGAACCCCACCAAGGCACAGGATGCCGGGGTC...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GTCCCGCTGCCCCCTGTGAAGGGCCACCTGTCGGAGCATGGGCTTTGGGGTTTCGGGCTTGCCGGCGGCTaGACAGCCCCAACGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VPLPPVKGHLSEHGLWGFGLAGG*TAPTQV
Trigger: AACCTGCGTTGGGGCTGTGCAGCCGCCGGCAAGCCC...GAAACCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
CDS-3UTR GCA 90 bp AAGCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCGGGCTTGCCGGCGGCTaGACAGCCCCAACGCAGGTT +
Preference number: 4 (lower is better)
Translates to: KLKGLRLPASGIGALVLSGLAGG*TAPTQV
Trigger: AACCTGCGTTGGGGCTGTGCAGCCGCCGGCAAGCCC...GCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp CCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCGGGCTTGCCGGCGGCTaGACAGCCCCAACGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PGLGLLSSGGVRIGSQRAGLAGG*TAPTQV
Trigger: AACCTGCGTTGGGGCTGTGCAGCCGCCGGCAAGCCC...GGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp TCCTCAGCTGAGTACACGAGTGCAGTGAGGCTCTCGGGCCCATCCCCGCGGCGGCGGTCTGCCAGTGAGTaGTGCCCTGCCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SSAEYTSAVRLSGPSPRRRSASE*CPACGR
Trigger: CCTTCCGCAGGCAGGGCAGCACTCACTGGCAGACCG...CCGCCGCGGGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACTCAGCTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
CDS-3UTR GCA 90 bp GGTGGTGTCGCCAATGTCCCTCACCACCACACCTCCTGGGGGACCTGGCGGACCCGGTCTGCCAGTGAGTaGTGCCCTGCCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGVANVPHHHTSWGTWRTRSASE*CPACGR
Trigger: CCTTCCGCAGGCAGGGCAGCACTCACTGGCAGACCG...GGTCCGCCAGGTCCCCCAGGAGGTGTGGTGGTGAGGGACATTGGCGACACCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640352.1
CDS-3UTR GCA 90 bp AGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGACTGGTGTCCAGCCCTaGTGTCCTCACTCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RGSGSQPQASGRWFSAAWTGVQP*CPHSVR
Trigger: GCGGACCGAGTGAGGACAGCAGGGCTGGACACCAGT...CCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp TTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCACTGGTGTCCAGCCCTaGTGTCCTCACTCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: LAAGRGWLCPSEVASSCGTGVQP*CPHSVR
Trigger: GCGGACCGAGTGAGGACAGCAGGGCTGGACACCAGT...GCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRADCRQHWRGGRMIGHLGWQAQ*QPGCRP
Trigger: GGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCC...GAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR GCA 90 bp TCTGGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCGGCTGGCAGGCCCAGTaGCAGCCCGGTTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SGSGSGQVVLGIPGSRQGGWQAQ*QPGCRP
Trigger: GGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCC...GCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR GCA 90 bp TGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGAAGTCCAGGAGATGTTaGCAGGAGGTCGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: WQQEGAGCVRRRWRPAAAKSRRC*QEVAAE
Trigger: CTCCGCGGCGACCTCCTGGCAACATCTCCTGGACTT...CGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp CCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: PGLGLLSSGGVRIGSQRAEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...GGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp AGTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SVRPPWQQEGAGCVRRRWEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...CCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGACACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACGAGGTGGCGTCCAGCTaGGGCGCAGAGGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSGSGQVVLGIPGSRQGHEVASS*GAEGGV
Trigger: AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTC...GTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCTCAGACCAAGGCTGGTaGCCCTTTCCACCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLRLPASGIGALVLSRLGSDQGW*PFPPRA
Trigger: GGCCCTTGGTGGAAAGGGGCACCAGCCTTGGTCTGA...GCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp TGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGGTGGCTTCCTCCTGGTaGCTGTCCCCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: WQQEGAGCVRRRWRPAAAVASSW*LSPWWM
Trigger: CATCCACCATGGGGACAGCCACCAGGAGGAAGCCAC...CGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTGTGGCTTCCTCCTGGTaGCTGTCCCCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVVASSW*LSPWWM
Trigger: CATCCACCATGGGGACAGCCACCAGGAGGAAGCCAC...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCGGCCCGAAGGTGGTTTaGGATCCCAGGGCTGAACTC +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPGPKVV*DPRAEL
Trigger: GAGTTCAGCCCTGGGATCCCAAACCACCTTCGGGCC...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGGGCCCGAAGGTGGTTTaGGATCCCAGGGCTGAACTC +
Preference number: 4 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGGPKVV*DPRAEL
Trigger: GAGTTCAGCCCTGGGATCCCAAACCACCTTCGGGCC...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GTTGGAGGCCAGGCACTGGTAGACCCCGGCATCCTGTGCCTTGGTGGGGTTCATAGGTGGCTGGAGGGCTaGCCCGGGCGCGGCATGCCA +
Preference number: 4 (lower is better)
Translates to: VGGQALVDPGILCLGGVHRWLEG*PGRGMP
Trigger: TGGCATGCCGCGCCCGGGCCAGCCCTCCAGCCACCT...ATGAACCCCACCAAGGCACAGGATGCCGGGGTCTACCAGTGCCTGGCCTCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
CDS-3UTR CCA 90 bp CCCTGGAGCCTAATACCCTTACTGGGGCAGTGTGGACCAACGAGGCCTGGGCCTCCACCGATAGGTGGCTaGAGGGCTGGCCCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PWSLIPLLGQCGPTRPGPPPIGG*RAGPGA
Trigger: CGCGCCCGGGCCAGCCCTCCAGCCACCTATCGGTGG...AGGCCCAGGCCTCGTTGGTCCACACTGCCCCAGTAAGGGTATTAGGCTCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532366.2
ENST00000640352.1
CDS-3UTR CCA 90 bp GGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACGGGTGGGCTCAGCTGTaGTCCACTGCGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GSGSGQVVLGIPGSRQGHGWAQL*STAGTG
Trigger: CCCTGTCCCCGCAGTGGACCACAGCTGAGCCCACCC...GTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCGGTGTCTCGGCCCTTaGAGTTCTCCGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGRCLGP*SSPPHT
Trigger: AGTGTGAGGCGGAGAACTCCAAGGGCCGAGACACCG...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGAGCGGATCTGGCCAGGTGGTCCTAGGTATACCTGGGAGCAGGCAGGGCCACACCTCCACCCGGTTCTaGGAGGCCAGAGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GSGSGQVVLGIPGSRQGHTSTRF*EARGSP
Trigger: CGGGGAGCCTCTGGCCTCCCAGAACCGGGTGGAGGT...GTGGCCCTGCCTGCTCCCAGGTATACCTAGGACCACCTGGCCAGATCCGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp GCCTGTCCCGCTGCCCCCTGTGAAGGGCCACCTGTCGGAGCATGGGCTTTGGGGCGGCTAGCTCGGCGCTaGCGTAGATGGTACCGTGCT +
Preference number: 4 (lower is better)
Translates to: ACPAAPCEGPPVGAWALGRLARR*RRWYRA
Trigger: AGCACGGTACCATCTACGCCAGCGCCGAGCTAGCCG...CCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCGGGTCGTGGGAGGCATaGCACTGTAGGGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLRLPASGIGALVLSRLGGSWEA*HCRVRL
Trigger: CAACCTGACCCTACAGTGCCATGCCTCCCACGACCC...GCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTCTGTCCACCACCGTCTaGGCCATGCACGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: GLAVSVGGGVQLRRRGRGLSTTV*AMHVYF
Trigger: GAAGTACACGTGCATGGCCCAGACGGTGGTGGACAG...ACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCGGACTGTGGCCTCCTTaGACGCGCTGTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: RGGRADCRQHWRGGRMIGGLWPP*TRCPPP
Trigger: CGGTGGTGGACAGCGCGTCCAAGGAGGCCACAGTCC...GCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR CCA 90 bp GGCACAGTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGACACCACCACACCTCCTaGGGGACCTGGCGGACCTCG +
Preference number: 4 (lower is better)
Translates to: GTVSGHLGSRKGLAVSVGHHHTS*GTWRTS
Trigger: CGAGGTCCGCCAGGTCCCCCAGGAGGTGTGGTGGTG...TCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGACACTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp AGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGCGGCTCCAGCTGAGCTaGATGGTGGTGTCGCCAATG +
Preference number: 4 (lower is better)
Translates to: RKGLAVSVGGGVQLRRRGRLQLS*MVVSPM
Trigger: CATTGGCGACACCACCATCCAGCTCAGCTGGAGCCG...CCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCTTAGCGATGGGGCTGTaGTTGTCGAAGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRRLAMGL*LSKPRL
Trigger: GAGCCGTGGCTTCGACAACCACAGCCCCATCGCTAA...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGGCCCTCACGGTCACATaGTACTTGGTGTTGGGATGC +
Preference number: 4 (lower is better)
Translates to: GAGCVRRRWRPAAAQREGALTVT*YLVLGC
Trigger: GCATCCCAACACCAAGTACCATGTGACCGTGAGGGC...CCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GAGGTCGCCGCGGAGGGGGCTTCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGTCATGGTCGTGGCGTTaGCAGAAGGGCTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: EVAAEGASWSWRWQKGWQSWSWR*QKGWQA
Trigger: GGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGA...CTGCCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCCCTCCGCGGCGACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
CDS-3UTR CCA 90 bp CTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCGGGGCTTCATGGTCGTaGCGTTGGCAGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKGLRLPASGIGALVLSRGASWS*RWQKGW
Trigger: CCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCC...GCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GCTGAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGGGGGCTTCATGGTCGTaGCGTTGGCAGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AEGAQAPSLRHRGAGSQPGASWS*RWQKGW
Trigger: CCAGCCCTTCTGCCAACGCCACGACCATGAAGCCCC...CGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp CCGGGCCTAGGACTGCTCTCAAGTGGCGGAGTCCGTATAGGGTCCCAGAGGGCCTGTGTCCGTCGGAGGTaGCGTCCAGCTGCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PGLGLLSSGGVRIGSQRACVRRR*RPAAAQ
Trigger: CTGCGCCGCAGCTGGACGCCACCTCCGACGGACACA...GGCCCTCTGGGACCCTATACGGACTCCGCCACTTGAGAGCAGTCCTAGGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCGCAGCACTGGAGAGGTaGGCGCATGATTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GSRKGLAVSVGGGVQLRRAALER*AHDWPS
Trigger: AGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGC...GCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp AGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGCAGTCCAAGGCCGTCTaGGAGCGGATCTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGSGSQPQASGRWFSAAWQSKAV*ERIWPG
Trigger: ACCTGGCCAGATCCGCTCCCAGACGGCCTTGGACTG...CCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR CCA 90 bp GCCTGTCCCGCTGCCCCCTGTGAAGGGCCACCTGTCGGAGCATGGGCTTTGGGGAGGCTGGCTGGCCCTTaGGGCTGCCCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ACPAAPCEGPPVGAWALGRLAGP*GCPKEA
Trigger: TGCCTCTTTAGGGCAGCCCCAAGGGCCAGCCAGCCT...CCCCAAAGCCCATGCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331830.7
ENST00000636312.2
3UTR CAA 72 bp GGTGCCACCGAGGGGGCTGCTTCCCTGGTCCGGATTTaGCTGGAGGGCCCACTAGGCTCCCCAGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GATEGAASLVRI*LEGPLGSPVPR
Trigger: TCTGGGCACTGGGGAGCCTAGTGGGCCCTCCAGCAAAATCCGGACCAGGGAAGCAGCCCCCTCGGTGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639843.1
ENST00000640352.1
CDS-3UTR TCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTAGTTGGGGAACTCGTTaGGGAGCCAGCGGTAGGACA +
Preference number: 4 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVSWGTR*GASGRT
Trigger: TGTCCTACCGCTGGCTCCTCAACGAGTTCCCCAACT...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGAGTTGGGGAACTCGTTaGGGAGCCAGCGGTAGGACA +
Preference number: 4 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGSWGTR*GASGRT
Trigger: TGTCCTACCGCTGGCTCCTCAACGAGTTCCCCAACT...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp AGCCGCTTGGGCAGGCAGGAGCCCCTAGGGAGTTATCGGGGACAGCGTCAGGGTGTCTGGGACACGAAGTaGCGCCCGTCCGTCGGGATG +
Preference number: 4 (lower is better)
Translates to: SRLGRQEPLGSYRGQRQGVWDTK*RPSVGM
Trigger: CATCCCGACGGACGGGCGTCACTTCGTGTCCCAGAC...ACCCTGACGCTGTCCCCGATAACTCCCTAGGGGCTCCTGCCTGCCCAAGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp CGGGGAGGCCGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCTGGGAACCGGGCCTTaGTGCTGGGTGCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RGGRADCRQHWRGGRMIGLGTGP*CWVQRA
Trigger: GGCTCTTTGCACCCAGCATCAAGGCCCGGTTCCCAG...GCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCGGCCTCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR TCA 90 bp GTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCCCACTTTGCGCCACTTaGTCCGGGGGACAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VSGHLGSRKGLAVSVGGGPLCAT*SGGQGS
Trigger: GGAACCCTGTCCCCCGGATCAAGTGGCGCAAAGTGG...GCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCAAGGTGGCCTGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp TCCTCAGCTGAGTACACGAGTGCAGTGAGGCTCTCGGGCCCATCCCCGCGGCGGCCACTTTGCGCCACTTaGTCCGGGGGACAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSAEYTSAVRLSGPSPRRPLCAT*SGGQGS
Trigger: GGAACCCTGTCCCCCGGATCAAGTGGCGCAAAGTGG...CCGCCGCGGGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACTCAGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639971.1
ENST00000640352.1
CDS-3UTR TCA 90 bp GGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGGCCCTCACCCTCATCCTCAAAGCTaGCGCTGGGGATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVGRRAGRPSASPVVGPHPHPQS*RWGSAG
Trigger: CCCTGCAGATCCCCAGCGTCAGCTTTGAGGATGAGG...GTGAGGGCCTACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639122.1
ENST00000639971.1
ENST00000640352.1
CDS-3UTR TCA 90 bp CAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGTCACGGGATTCAGCCTaGAGTCAGGGGCGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QEGAGCVRRRWRPAAAQRSRDSA*SQGRVL
Trigger: AAGCACTCGCCCCTGACTTCAGGCTGAATCCCGTGA...CCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639122.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp TCATGGTCGTGGCGTTGGCAGAAGGGCTGGCAGGCCCAGTGCCAGCCCGGTTGTAGTCCATCCAGGGGGTaGGGCCCAGCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SWSWRWQKGWQAQCQPGCSPSRG*GPAPVQ
Trigger: CTGCACAGGTGCTGGGCCTCACCCCCTGGATGGACT...ACAACCGGGCTGGCACTGGGCCTGCCAGCCCTTCTGCCAACGCCACGACCATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000639122.1
ENST00000639843.1
ENST00000639971.1
ENST00000640352.1
CDS-3UTR TCA 90 bp GGGTCTTGGAGGGGTGGGAGACCCCACCAAGACAAGCCCTTTAGTCACCCAGCCTCCTCCGCTGAGTCCTaGGGGTGCCACCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GSWRGGRPHQDKPFSHPASSAES*GCHRGG
Trigger: GCCCCCTCGGTGGCACCCTCAGGACTCAGCGGAGGA...GGCTGGGTGACTAAAGGGCTTGTCTTGGTGGGGTCTCCCACCCCTCCAAGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR TCA 90 bp GAAGGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTAGTACACGAGTGCAGTaGGGCTCTCGGGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: EGAQAPSLRHRGAGSQPLSTRVQ*GSRAHP
Trigger: GGGATGGGCCCGAGAGCCTCACTGCACTCGTGTACT...AAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp TGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCGCTGTCAATCGGGATaGCAGGGTCAGGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: WQQEGAGCVRRRWRPAAARCQSG*QGQVGS
Trigger: ACTGCCAACCTGACCCTGTCATCCCGATTGACAGCG...CGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp GGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCGCTGTCAATCGGGATaGCAGGGTCAGGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GWLCPSEVASSCGAEGGVRCQSG*QGQVGS
Trigger: ACTGCCAACCTGACCCTGTCATCCCGATTGACAGCG...AACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCCGCTGTCAATCGGGATaGCAGGGTCAGGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPRCQSG*QGQVGS
Trigger: ACTGCCAACCTGACCCTGTCATCCCGATTGACAGCG...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp TGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCCAGGACACACAGCATaGATGCTGCATTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: WQQEGAGCVRRRWRPAAAPGHTA*MLHSPP
Trigger: GGGAGGGGAATGCAGCATTCATGCTGTGTGTCCTGG...CGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR TCA 90 bp TGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGCCCAAACCCTCCCGCTGCCCCCTGTaGAGGGCCACCTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: CRQHWRGGRMIGHLLPKPSRCPL*RATCRS
Trigger: GCTCCGACAGGTGGCCCTTCACAGGGGGCAGCGGGA...GGGTTTGGGCAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000640326.1
CDS-3UTR GCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCATGCCAGCAACACCTaGTCCTCCGTGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGHASNT*SSVDSS
Trigger: AGAGGAGTCCACGGAGGAGCAGGTGTTGCTGGCATG...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp CCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCAGGCAGGAGCCCCATGCCAGCAACACCTaGTCCTCCGTGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: PASGIGALVLSRLGRQEPHASNT*SSVDSS
Trigger: AGAGGAGTCCACGGAGGAGCAGGTGTTGCTGGCATG...GGGCTCCTGCCTGCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp CGAGCTGACTGCAGGCAGCACTGGAGAGGTGGGCGCATGATTGGCCATCTCCTGGGCCCGGGCGCGGCATaGCAGCAACACCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RADCRQHWRGGRMIGHLLGPGAA*QQHLLL
Trigger: GAGGAGCAGGTGTTGCTGGCATGCCGCGCCCGGGCC...CAGGAGATGGCCAATCATGCGCCCACCTCTCCAGTGCTGCCTGCAGTCAGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
ENST00000640428.1
CDS-3UTR GCA 90 bp GGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCGACCCCGGCATCCTGTaGCTTGGTGGGGTTCATGAT +
Preference number: 4 (lower is better)
Translates to: GLRLPASGIGALVLSRLGDPGIL*LGGVHD
Trigger: ATCATGAACCCCACCAAGGCACAGGATGCCGGGGTC...GCCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp CTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCAGAGGGAGGGGTTCCCTGCTGCCCCACCAGTaGATAGGTCTCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LAVSVGGGVQLRRRGRGSLLPHQ*IGLCWE
Trigger: TTCCCAGCAGAGACCTATGCACTGGTGGGGCAGCAG...GGAACCCCTCCCTCTGCGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000639302.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp GGGGCTCAGGCTCCCAGCCTCAGGCATCGGGGCGCTGGTTCTCAGCCGCTTGGGCTGCTTCCACTTCCCTaGAGGTGGAGTGCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GAQAPSLRHRGAGSQPLGLLPLP*RWSASL
Trigger: CAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAG...CCCAAGCGGCTGAGAACCAGCGCCCCGATGCCTGAGGCTGGGAGCCTGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331830.7
ENST00000636312.2
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp TGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGTCCAGCTGCGGCGCTGCTTCCACTTCCCTaGAGGTGGAGTGCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: WQQEGAGCVRRRWRPAAALLPLP*RWSASL
Trigger: CAAGCTCGCACTCCACCTGCAGGGAAGTGGAAGCAG...CGCCGCAGCTGGACGCCACCTCCGACGGACACAGCCAGCCCCTTCCTGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331830.7
ENST00000638378.1
ENST00000638577.1
ENST00000639122.1
ENST00000639302.1
ENST00000639843.1
ENST00000639971.1
ENST00000640326.1
CDS-3UTR GCA 90 bp AGTGTCAGGCCACCTTGGCAGCAGGAAGGGGCTGGCTGTGTCCGTCGGAGGTGGCGGTCTGCCAGTGAGTaGTGCCCTGCCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVRPPWQQEGAGCVRR