RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000018236

Ensembl transcript IDs: ENST00000347616.5, ENST00000348761.2, ENST00000547702.5, ENST00000547849.5, ENST00000548005.5, ENST00000548481.1, ENST00000550305.1, ENST00000551295.7, ENST00000551424.5, ENST00000552248.5, ENST00000552913.5

Found 597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACAGCAGCTGTCACAACACATTCAGAATTCCAAGTAGACAAGGATaGCAAAGGCAGGCAGCAGTAAGCCGAGAAGACTTGGGGATAGGG +
Preference number: 1 (lower is better)
Translates to: NSSCHNTFRIPSRQG*QRQAAVSREDLGIG
Trigger: CCCTATCCCCAAGTCTTCTCGGCTTACTGCTGCCTGCCTTTGGCATCCTTGTCTACTTGGAATTCTGAATGTGTTGTGACAGCTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548481.1
3UTR GCA 90 bp CAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTaGCTCCTCCTGGCCTTCCAGTTTTGCATACTCTTCAAAGTACCA +
Preference number: 1 (lower is better)
Translates to: QSTNTWETPSERHII*LLLAFQFCILFKVP
Trigger: TGGTACTTTGAAGAGTATGCAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR CCA 90 bp GCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTaGGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCC +
Preference number: 1 (lower is better)
Translates to: ASSFSQLIKTQSTNT*ETPSERHIICLLLA
Trigger: GGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR GCA 90 bp ACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAAATGTaGATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACAC +
Preference number: 1 (lower is better)
Translates to: TLKHISMHTMENEEM*IFLFTTYKNPKHQH
Trigger: GTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR TCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACTGGTCATCCCAGGGTTaGAGGGTGTCTTCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNWSSQG*RVSSEL
Trigger: CAGCTCAGAAGACACCCTTCAACCCTGGGATGACCA...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR GCA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGGAAGGGGTTCCCGAATaGCTCAGTCATCATGTGTGT +
Preference number: 2 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLEGVPE*LSHHVC
Trigger: ACACACATGATGACTGAGGCATTCGGGAACCCCTTC...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR CCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGGGGTGTCTTCTGAGCTaGGATGGGAACAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQGCLLS*DGNSSC
Trigger: ACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCC...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR CCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGGGTGTCTTCTGAGCTaGGATGGGAACAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSGCLLS*DGNSSC
Trigger: ACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCC...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR TCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCTGGTCATCCCAGGGTTaGAGGGTGTCTTCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSWSSQG*RVSSEL
Trigger: CAGCTCAGAAGACACCCTTCAACCCTGGGATGACCA...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR GCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGGGGGTGGGGAGAACTaGAGAAGCTACAAGATTGAG +
Preference number: 2 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGGGGEN*RSYKIE
Trigger: CTCAATCTTGTAGCTTCTGCAGTTCTCCCCACCCCC...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR-3UTR CCA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGTGGAGCCGCAGAAATTaGAAGGAATTGTGGTCATCC +
Preference number: 2 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLWSRRN*KELWSS
Trigger: GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCA...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR TCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTATCTTGCTACTCAGATaGGGGTTTCCCCCACATGCT +
Preference number: 2 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSILLLR*GFPPHA
Trigger: AGCATGTGGGGGAAACCCTCATCTGAGTAGCAAGAT...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR-3UTR GCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGCCAAGTAGACAAGGATaGCAAAGGCAGGCAGCAGTA +
Preference number: 2 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLPSRQG*QRQAAV
Trigger: TACTGCTGCCTGCCTTTGGCATCCTTGTCTACTTGG...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548481.1
3UTR-3UTR CCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCAGGGTGTCTTCTGAGCTaGGATGGGAACAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSGCLLS*DGNSSC
Trigger: ACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCC...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR TCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTTATTCTTTTGGATaGAGGGGTTCCCGAATGCCT +
Preference number: 2 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSVYSFG*RGSRMP
Trigger: AGGCATTCGGGAACCCCTTCATCCAAAAGAATAAAC...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR CAA 90 bp TGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTaGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: CIFLFTTYKNPKHQH*GDTIGKTYYLPPPG
Trigger: GCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR GCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTCATTGGGTTAAATCATaGAACTGTCACAGAATCAGG +
Preference number: 2 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPHWVKS*NCHRIR
Trigger: CCTGATTCTGTGACAGTTGCATGATTTAACCCAATG...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR CCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGGGTGTCTTCTGAGCTaGGATGGGAACAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKGCLLS*DGNSSC
Trigger: ACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCC...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR GCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAGGGGGTGGGGAGAACTaGAGAAGCTACAAGATTGAG +
Preference number: 2 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEGGGEN*RSYKIE
Trigger: CTCAATCTTGTAGCTTCTGCAGTTCTCCCCACCCCC...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR-3UTR TCA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAAGTTTATTCTTTTGGATaGAGGGGTTCCCGAATGCCT +
Preference number: 2 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQVYSFG*RGSRMP
Trigger: AGGCATTCGGGAACCCCTTCATCCAAAAGAATAAAC...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR GCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTCTTTACTAAAATCTTaGTACTCAGATGAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVSLLKS*YSDEGF
Trigger: GAAACCCTCATCTGAGTAGCAAGATTTTAGTAAAGA...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR-3UTR GCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTTCTTTACTAAAATCTTaGTACTCAGATGAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSSLLKS*YSDEGF
Trigger: GAAACCCTCATCTGAGTAGCAAGATTTTAGTAAAGA...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR CAA 90 bp CCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTaGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: PNASVIMCVVNQLNS*LKYNLFGLGWSRRN
Trigger: ATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR CCA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAACAGAATCAGGTTAAGTaGTTTATAAGGCATATTGGA +
Preference number: 2 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQQNQVK*FIRHIG
Trigger: TCCAATATGCCTTATAAACCACTTAACCTGATTCTG...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTAAGCCGAGAAGACTaGGGGATAGGGTGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGVSRED*GIGWVH
Trigger: GTGCACCCACCCTATCCCCAAGTCTTCTCGGCTTAC...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548481.1
3UTR-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTATGGAGCCGCAGAAATaGGAAGGAATTGTGGTCATC +
Preference number: 3 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGMEPQK*EGIVVI
Trigger: GATGACCACAATTCCTTCCAATTTCTGCGGCTCCAT...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTTCCAATTCCAGGAATaGTTCCAAAAACCCTACAGA +
Preference number: 3 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVFQFQE*FQKPYR
Trigger: TCTGTAGGGTTTTTGGAACAATTCCTGGAATTGGAA...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGATTCCAATTCCAGGAATaGTTCCAAAAACCCTACAGA +
Preference number: 3 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGFQFQE*FQKPYR
Trigger: TCTGTAGGGTTTTTGGAACAATTCCTGGAATTGGAA...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR-3UTR CAA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAATGGAGCCGCAGAAATaGGAAGGAATTGTGGTCATC +
Preference number: 3 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLMEPQK*EGIVVI
Trigger: GATGACCACAATTCCTTCCAATTTCTGCGGCTCCAT...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
3UTR-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGAGAGTTTGACAACATaGTTCATTACCTGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGESLTT*FITCLN
Trigger: ATTCAAGCAGGTAATGAACAATGTTGTCAAACTCTC...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR-3UTR CAA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTGAGAGTTTGACAACATaGTTCATTACCTGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSESLTT*FITCLN
Trigger: ATTCAAGCAGGTAATGAACAATGTTGTCAAACTCTC...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR-3UTR CAA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTGTCTCATTAGAGAGTTaGACAACATTGTTCATTACC +
Preference number: 3 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSVSLES*TTLFIT
Trigger: GGTAATGAACAATGTTGTCAAACTCTCTAATGAGAC...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR GCA 72 bp CACATTTCCATGCACACCATGGAGAATGAAGAAATGTaGATCTTCCTTTTCACAACTTATAAAAACCCAAAG +
Preference number: 3 (lower is better)
Translates to: HISMHTMENEEM*IFLFTTYKNPK
Trigger: CTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTTCTTCATTCTCCATGGTGTGCATGGAAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR CAA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAAATTGAACACTGTAACTaGTCCCATTGGGTTAAATCA +
Preference number: 3 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQIEHCN*SHWVKS
Trigger: TGATTTAACCCAATGGGACAAGTTACAGTGTTCAAT...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR CAA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTATGATCTTAAGACTGTaGACATACTTCCACTGGGAA +
Preference number: 3 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFMILRL*TYFHWE
Trigger: TTCCCAGTGGAAGTATGTCAACAGTCTTAAGATCAT...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR CAA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTATTGAACACTGTAACTaGTCCCATTGGGTTAAATCA +
Preference number: 3 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFIEHCN*SHWVKS
Trigger: TGATTTAACCCAATGGGACAAGTTACAGTGTTCAAT...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR-3UTR CAA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAGTCTCATTAGAGAGTTaGACAACATTGTTCATTACC +
Preference number: 3 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEVSLES*TTLFIT
Trigger: GGTAATGAACAATGTTGTCAAACTCTCTAATGAGAC...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR TCA 72 bp AAATCACAACCTTCCACCCAAACGATCTACAAAAGCTaGTGGCAGGAGTCAATAAAATTAAATATGAATGCA +
Preference number: 3 (lower is better)
Translates to: KSQPSTQTIYKS*WQESIKLNMNA
Trigger: TGCATTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
3UTR CCA 72 bp AATAGTTTGTTAAAGTATAATTTATTTGGCTTAGGATaGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCC +
Preference number: 3 (lower is better)
Translates to: NSLLKYNLFGLG*SRRNWKELWSS
Trigger: GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR GCA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCCTGTTCCCTGCTCCTaGTCGCCTCGGTGCGGCACA +
Preference number: 4 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLPVPCS*SPRCGT
Trigger: TGTGCCGCACCGAGGCGAGCAGGAGCAGGGAACAGG...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551295.7
CDS-3UTR GCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACTCTCCTCCATCACTGTaGGCGCGAACCTCCACAACG +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNSPPSL*ARTSTT
Trigger: CGTTGTGGAGGTTCGCGCGCACAGTGATGGAGGAGA...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTACCACCTGGAGGGCCTaGAGGGCCTCTCACTACAAG +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGTTWRA*RASHYK
Trigger: CTTGTAGTGAGAGGCCCTCCAGGCCCTCCAGGTGGT...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGTCTCCTCCATCACTGTaGGCGCGAACCTCCACAACG +
Preference number: 4 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLSPPSL*ARTSTT
Trigger: CGTTGTGGAGGTTCGCGCGCACAGTGATGGAGGAGA...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR GCA 90 bp AAGGCAGGCAGCAGTAAGCCGAGAAGACTTGGGGATAGGGTGGGTGCACCTCTAGAAGGGGTTCCCGAATaGCTCAGTCATCATGTGTGT +
Preference number: 4 (lower is better)
Translates to: KAGSSKPRRLGDRVGAPLEGVPE*LSHHVC
Trigger: ACACACATGATGACTGAGGCATTCGGGAACCCCTTC...TAGAGGTGCACCCACCCTATCCCCAAGTCTTCTCGGCTTACTGCTGCCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR CCA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGTCCGCTGCAAACACCTaGGAGCGCATCTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLSAANT*ERISPP
Trigger: CGGTGGGGAGATGCGCTCCCAGGTGTTTGCAGCGGA...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551295.7
CDS-3UTR TCA 90 bp TGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACAGCAGCGAGGTGCTTTCTTGGTaGAAGCCTCAATCATGTCAC +
Preference number: 4 (lower is better)
Translates to: CGHPRVEGCLLSWDGNSSEVLSW*KPQSCH
Trigger: GTGACATGATTGAGGCTTTCACCAAGAAAGCACCTC...GCTGCTGTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTTGGTCATCCCAGGGTTaGAGGGTGTCTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGWSSQG*RVSSEL
Trigger: CAGCTCAGAAGACACCCTTCAACCCTGGGATGACCA...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR GCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCCTGTTCCCTGCTCCTaGTCGCCTCGGTGCGGCACA +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVPVPCS*SPRCGT
Trigger: TGTGCCGCACCGAGGCGAGCAGGAGCAGGGAACAGG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547702.5
CDS-3UTR CCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACACGCAGCACACTGCATaGTGGCGTTTTCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNTQHTA*WRFLQL
Trigger: CAGTTGGAGAAAACGCCACCATGCAGTGTGCTGCGT...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACTCCCTTCTTTTACTCTaGCCTCAGGACGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNSLLLL*PQDVPQ
Trigger: CTGAGGAACGTCCTGAGGTCAGAGTAAAAGAAGGGA...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTTCCACCTCCTACATCTaGAGGAGCCACATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGSTSYI*RSHIWC
Trigger: GCACCAAATGTGGCTCCTTCAGATGTAGGAGGTGGA...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACGCCAGTAGAGATCACTaGCTATGTCCACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNASRDH*LCPPLC
Trigger: ACACAGAGGTGGACATAGGCAGTGATCTCTACTGGC...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACGAAGGGGTTCCCGAATaGCTCAGTCATCATGTGTGT +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNEGVPE*LSHHVC
Trigger: ACACACATGATGACTGAGGCATTCGGGAACCCCTTC...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGTACACCTACTTCTGTTaGGGCTTCACTGGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLYTYFC*GFTGSV
Trigger: GACGCTCCCAGTGAAGCCCCAACAGAAGTAGGTGTA...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACAGCAGCTCCATCTCTGGGGATTaGGACTTCTATGGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: CGHPRVEGCLLSWDGNSSSISGD*DFYGVF
Trigger: AAACACTCCATAGAAGTCCCAATCCCCAGAGATGGA...GCTGCTGTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp AGACAAGGATGCCAAAGGCAGGCAGCAGTAAGCCGAGAAGACTTGGGGATAGGGTGGAGCCGCAGAAATTaGAAGGAATTGTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: RQGCQRQAAVSREDLGIGWSRRN*KELWSS
Trigger: GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCA...CCCTATCCCCAAGTCTTCTCGGCTTACTGCTGCCTGCCTTTGGCATCCTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR TCA 90 bp TGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACAGCAGCTGTATCGATCACTTGTaGGATCAACGTCCCCATTAT +
Preference number: 4 (lower is better)
Translates to: CGHPRVEGCLLSWDGNSSCIDHL*DQRPHY
Trigger: ATAATGGGGACGTTGATCTCACAAGTGATCGATACA...GCTGCTGTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACGTATTCTGCTGCTATTaGCAAGCCACTCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNVFCCY*QATLSL
Trigger: AAGGGACAGAGTGGCTTGTCAATAGCAGCAGAATAC...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACAGGACTATGATTGTCTaGACCACGGCTCCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNRTMIV*TTAPSK
Trigger: CTTACTTGGAGCCGTGGTTCAGACAATCATAGTCCT...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGCCAGTAGAGATCACTaGCTATGTCCACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGASRDH*LCPPLC
Trigger: ACACAGAGGTGGACATAGGCAGTGATCTCTACTGGC...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AAACCCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTGGAGGTCCACACCCTaGACTATTGCAGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: KPKAPTLGRHHRKDILFAWRSTP*TIAGPD
Trigger: GTCGGGGCCTGCAATAGTGCAGGGTGTGGACCTCCA...GGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACGAGTTGAATACAGCTTaGCATCATGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNELNTA*HHAGHQ
Trigger: CTGATGGCCAGCATGATGGCAAGCTGTATTCAACTC...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGCCAAGTAGACAAGGATaGCAAAGGCAGGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLPSRQG*QRQAAV
Trigger: TACTGCTGCCTGCCTTTGGCATCCTTGTCTACTTGG...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR GCA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCCAAGTAGACAAGGATaGCAAAGGCAGGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLPSRQG*QRQAAV
Trigger: TACTGCTGCCTGCCTTTGGCATCCTTGTCTACTTGG...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACATCTGGAAAATGGTATaGGGGGTCACAGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNIWKMV*GVTEKH
Trigger: GTGCTTCTCTGTGACCCCCCATACCATTTTCCAGAT...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACAAGGCGCCCATGTTATaGTCAGCTCTCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNKAPML*SALCFF
Trigger: GAAGAAACAGAGAGCTGACCATAACATGGGCGCCTT...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGCTGTTGGGGCTTCACTaGGAGCGTCTTGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWLLGLH*ERLVLN
Trigger: ATTCAGCACAAGACGCTCCCAGTGAAGCCCCAACAG...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGGAAGGTTCTCGAGCCTaGCCGAGTACTCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLEGSRA*PSTLGW
Trigger: CCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTC...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTATGATCCTTGGAGGCTaGCTAGGAGGTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLMILGG*LGGAFL
Trigger: CAAGAAAGCACCTCCTAGCCAGCCTCCAAGGATCAT...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGATGATCCTTGGAGGCTaGCTAGGAGGTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLMILGG*LGGAFL
Trigger: CAAGAAAGCACCTCCTAGCCAGCCTCCAAGGATCAT...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACCGTATTCTCCATCTCTaGGGATTGGGACTTCTATGG +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNRILHL*GLGLLW
Trigger: CCATAGAAGTCCCAATCCCCAGAGATGGAGAATACG...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTCCCTTCTTTTACTCTaGCCTCAGGACGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGSLLLL*PQDVPQ
Trigger: CTGAGGAACGTCCTGAGGTCAGAGTAAAAGAAGGGA...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTTCTTGGCTGGTGACTTaGACTCTGTTTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGSWLVT*TLFAAS
Trigger: AGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGA...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAGTACTCTTGGCTGGTaGCTTGAACTCTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLSTLGW*LELCLQ
Trigger: CTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACT...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCGACATGATCCCAGGTaGTTATATAGCGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLRHDPR*LYSVNQ
Trigger: CTGGTTCACGCTATATAATCACCTGGGATCATGTCG...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACGTGCACCTGAAATTTTaGCTTGAGACACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNVHLKF*LETPLH
Trigger: ATGGAGTGGTGTCTCAAGTCAAAATTTCAGGTGCAC...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTTGGTCATCCCAGGGTTaGAGGGTGTCTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPWSSQG*RVSSEL
Trigger: CAGCTCAGAAGACACCCTTCAACCCTGGGATGACCA...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGTGGTCATCCCAGGGTTaGAGGGTGTCTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQWSSQG*RVSSEL
Trigger: CAGCTCAGAAGACACCCTTCAACCCTGGGATGACCA...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACGTTTATTCTTTTGGATaGAGGGGTTCCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNVYSFG*RGSRMP
Trigger: AGGCATTCGGGAACCCCTTCATCCAAAAGAATAAAC...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR GCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTTCCAAAGCTCAGGGTTaGTTCAGTGCTTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGSKAQG*FSASDH
Trigger: ATGGTCAGAAGCACTGAAGCAACCCTGAGCTTTGGA...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTGCCAGTAGAGATCACTaGCTATGTCCACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGASRDH*LCPPLC
Trigger: ACACAGAGGTGGACATAGGCAGTGATCTCTACTGGC...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGACGGCTCCAAGTAAGTaGCACAGAAGTGGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLTAPSK*HRSGSN
Trigger: ATTAGAGCCACTTCTGTGGCACTTACTTGGAGCCGT...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTGGAGGTCCACACCCTaGACTATTGCAGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNWRSTP*TIAGPD
Trigger: GTCGGGGCCTGCAATAGTGCAGGGTGTGGACCTCCA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACAGCAGCGATATCGGCATTAATTaGGGCCAATATAATTCGCGT +
Preference number: 4 (lower is better)
Translates to: CGHPRVEGCLLSWDGNSSDIGIN*GQYNSR
Trigger: ACGCGAATTATATTGGCCCCAATTAATGCCGATATC...GCTGCTGTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCACCACCTGGAGGGCCTaGAGGGCCTCTCACTACAAG +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSTTWRA*RASHYK
Trigger: CTTGTAGTGAGAGGCCCTCCAGGCCCTCCAGGTGGT...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGCTCTACCCAGTGTATTaGTTGCTACCACGCGGAATT +
Preference number: 4 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLLYPVY*LLPRGI
Trigger: AATTCCGCGTGGTAGCAACCAATACACTGGGTAGAG...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGCTCTACCCAGTGTATTaGTTGCTACCACGCGGAATT +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLLYPVY*LLPRGI
Trigger: AATTCCGCGTGGTAGCAACCAATACACTGGGTAGAG...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTAAGGCGCCCATGTTATaGTCAGCTCTCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGKAPML*SALCFF
Trigger: GAAGAAACAGAGAGCTGACCATAACATGGGCGCCTT...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGGCTTCTTCTTTGTCATaGGCAGCCCAATACCGAATC +
Preference number: 4 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLASSLS*AAQYRI
Trigger: GATTCGGTATTGGGCTGCCCATGACAAAGAAGAAGC...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACGACTTTTCCTTCCAGTaGTTCCTCTGGATAAATGGT +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNDFSFQ*FLWING
Trigger: ACCATTTATCCAGAGGAATCACTGGAAGGAAAAGTC...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGTATTCTGCTGCTATTaGCAAGCCACTCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWVFCCY*QATLSL
Trigger: AAGGGACAGAGTGGCTTGTCAATAGCAGCAGAATAC...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGAGGACTATGATTGTCTaGACCACGGCTCCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWRTMIV*TTAPSK
Trigger: CTTACTTGGAGCCGTGGTTCAGACAATCATAGTCCT...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTCGACATGATCCCAGGTaGTTATATAGCGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGRHDPR*LYSVNQ
Trigger: CTGGTTCACGCTATATAATCACCTGGGATCATGTCG...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTCTCAAGACATGGTTCTaGTGCTTCTGTGATCTTTGG +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGLKTWF*CFCDLW
Trigger: CCAAAGATCACAGAAGCATCAGAACCATGTCTTGAG...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR GCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGAAGGACGCAGCACACTaGATGGTGGCGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQKDAAH*MVAFSP
Trigger: TGGAGAAAACGCCACCATGCAGTGTGCTGCGTCCTT...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGCAATTGTCTGGGCAGTaGATGTGTATCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLQLSGQ*MCIFQH
Trigger: ATGCTGGAAGATACACATGCACTGCCCAGACAATTG...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTACCCAGTGTATTGGTTaGTACCACGCGGAATTCATA +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGTQCIG*YHAEFI
Trigger: TATGAATTCCGCGTGGTAGCAACCAATACACTGGGT...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACGACTTTAACTTGAAATaGAGTGGAAGGGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNDFNLK*SGRAHG
Trigger: ACCATGAGCCCTTCCACTGCATTTCAAGTTAAAGTC...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTCTCCTCCATCACTGTaGGCGCGAACCTCCACAACG +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLSPPSL*ARTSTT
Trigger: CGTTGTGGAGGTTCGCGCGCACAGTGATGGAGGAGA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTATCTGGAAAATGGTATaGGGGGTCACAGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGIWKMV*GVTEKH
Trigger: GTGCTTCTCTGTGACCCCCCATACCATTTTCCAGAT...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACAGCAGCTGTTCGTTCAGGTATTaGAATGAGTGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: CGHPRVEGCLLSWDGNSSCSFRY*NEWDEF
Trigger: AAATTCATCCCACTCATTCCAATACCTGAACGAACA...GCTGCTGTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACAGCAGCTTTAATTCTGTTAGATaGTATACTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CGHPRVEGCLLSWDGNSSFNSVR*YTGLSS
Trigger: AGAGGAGAGCCCAGTATACCATCTAACAGAATTAAA...GCTGCTGTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCGAAGGTTCTCGAGCCTaGCCGAGTACTCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSEGSRA*PSTLGW
Trigger: CCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTC...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTGTCTTCTGAGCTaGGATGGGAACAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPGCLLS*DGNSSC
Trigger: ACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCC...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGGGTGTCTTCTGAGCTaGGATGGGAACAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVGCLLS*DGNSSC
Trigger: ACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCC...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGTGGAGCCGCAGAAATTaGAAGGAATTGTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWWSRRN*KELWSS
Trigger: GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCA...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCAACGATCACCAGGTTaGAGGCAGGCTTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVQRSPG*RQACTD
Trigger: GTCTGTGCAAGCCTGCCTCCAACCTGGTGATCGTTG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTCTCGTGCCCTACAGTTaGGTGAGACTTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPLVPYS*VRLFLP
Trigger: TGGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAG...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGTCCCTTTACTCCATaGAAACTTTGGTTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGCPFTP*KLWFRC
Trigger: GCACCGAAACCAAAGTTTTCATGGAGTAAAGGGACA...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTCCACCTCCTACATCTaGAGGAGCCACATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQSTSYI*RSHIWC
Trigger: GCACCAAATGTGGCTCCTTCAGATGTAGGAGGTGGA...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGATAGTGGTATTCTCTTaGCAAAGGCGCCCATGTTAT +
Preference number: 4 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLIVVFS*QRRPCY
Trigger: ATAACATGGGCGCCTTTGTCAAGAGAATACCACTAT...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGTCTGAAATTTTGACTTaGGACACCACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLSEILT*DTTPSP
Trigger: AGGAGATGGAGTGGTGTCTCAAGTCAAAATTTCAGA...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR GCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGAAGGACGCAGCACACTaGATGGTGGCGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQKDAAH*MVAFSP
Trigger: TGGAGAAAACGCCACCATGCAGTGTGCTGCGTCCTT...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAAGGACGCAGCACACTaGATGGTGGCGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVKDAAH*MVAFSP
Trigger: TGGAGAAAACGCCACCATGCAGTGTGCTGCGTCCTT...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAAAGGACGCAGCACACTaGATGGTGGCGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSKDAAH*MVAFSP
Trigger: TGGAGAAAACGCCACCATGCAGTGTGCTGCGTCCTT...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTGTCCACTGCTCTTGCTaGCTCCATATTTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGVHCSC*LHISFN
Trigger: ATTGAAGGAAATATGGAGGCAGCAAGAGCAGTGGAC...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGTCCACTGCTCTTGCTaGCTCCATATTTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWVHCSC*LHISFN
Trigger: ATTGAAGGAAATATGGAGGCAGCAAGAGCAGTGGAC...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCGGATGGGCTTTCCTGTaGCCACACAAGGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSGWAFL*PHKASR
Trigger: TCTACTGGCCTTGTGTGGCCACAGGAAAGCCCATCC...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTGGATGGGCTTTCCTGTaGCCACACAAGGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSGWAFL*PHKASR
Trigger: TCTACTGGCCTTGTGTGGCCACAGGAAAGCCCATCC...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAACGCAGCACACTGCATaGTGGCGTTTTCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGTQHTA*WRFLQL
Trigger: CAGTTGGAGAAAACGCCACCATGCAGTGTGCTGCGT...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp AAACCCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCCTGTTGGGGCTTCACTaGGAGCGTCTTGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KPKAPTLGRHHRKDILFALLGLH*ERLVLN
Trigger: ATTCAGCACAAGACGCTCCCAGTGAAGCCCCAACAG...GGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGCTCAATCATGTCACTTaGAGGTCCACACCCTGCACT +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLLNHVT*RSTPCT
Trigger: AGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAG...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTATGATCCTTGGAGGCTaGCTAGGAGGTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPMILGG*LGGAFL
Trigger: CAAGAAAGCACCTCCTAGCCAGCCTCCAAGGATCAT...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGGGGTGTCTTCTGAGCTaGGATGGGAACAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLGCLLS*DGNSSC
Trigger: ACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCC...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTGACTTTTCCTTCCAGTaGTTCCTCTGGATAAATGGT +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGDFSFQ*FLWING
Trigger: ACCATTTATCCAGAGGAATCACTGGAAGGAAAAGTC...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGACTCGTGCCCTACAGTTaGGTGAGACTTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGLVPYS*VRLFLP
Trigger: TGGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAG...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGAGATTGCCATTTGTCTaGGACACAAATCGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWRLPFV*DTNRRL
Trigger: TAAACGGCGATTTGTGTCTCAGACAAATGGCAATCT...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGACCACCTCTGTGTCATTaGTGTGTTCTACCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGPPLCH*CVLPTQ
Trigger: CTGAGTGGGTAGAACACATCAATGACACAGAGGTGG...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAGGACTATGATTGTCTaGACCACGGCTCCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLRTMIV*TTAPSK
Trigger: CTTACTTGGAGCCGTGGTTCAGACAATCATAGTCCT...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGATCTTTCCAGTCATCTaGAAGAATAGTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLIFPVI*KNSLGL
Trigger: CAGACCAAGACTATTCTTTCAGATGACTGGAAAGAT...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTCCACCTCCTACATCTaGAGGAGCCACATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNSTSYI*RSHIWC
Trigger: GCACCAAATGTGGCTCCTTCAGATGTAGGAGGTGGA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAGTACTCTTGGCTGGTaGCTTGAACTCTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLSTLGW*LELCLQ
Trigger: CTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACT...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGGTGCACCTGAAATTTTaGCTTGAGACACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLVHLKF*LETPLH
Trigger: ATGGAGTGGTGTCTCAAGTCAAAATTTCAGGTGCAC...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAATCTTGCTACTCAGATaGGGGTTTCCCCCACATGCT +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGILLLR*GFPPHA
Trigger: AGCATGTGGGGGAAACCCTCATCTGAGTAGCAAGAT...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACTTGCAATGTAGAGATTaGCATTTGTCTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNLQCRD*HLSETQ
Trigger: TTGTGTCTCAGACAAATGGCAATCTCTACATTGCAA...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGGGAAGCCTCAACATTTaGAATGTAGAGATTGCCATT +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLGSLNI*NVEIAI
Trigger: AATGGCAATCTCTACATTGCAAATGTTGAGGCTTCC...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGCCAGTAGAGATCACTaGCTATGTCCACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGASRDH*LCPPLC
Trigger: ACACAGAGGTGGACATAGGCAGTGATCTCTACTGGC...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTGACTTTAACTTGAAATaGAGTGGAAGGGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGDFNLK*SGRAHG
Trigger: ACCATGAGCCCTTCCACTGCATTTCAAGTTAAAGTC...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTATGGAGGTCCACACCCTaGACTATTGCAGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLWRSTP*TIAGPD
Trigger: GTCGGGGCCTGCAATAGTGCAGGGTGTGGACCTCCA...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCACCAAGTAGACAAGGATaGCAAAGGCAGGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPPSRQG*QRQAAV
Trigger: TACTGCTGCCTGCCTTTGGCATCCTTGTCTACTTGG...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR GCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAAGGGGTTCCCGAATaGCTCAGTCATCATGTGTGT +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVEGVPE*LSHHVC
Trigger: ACACACATGATGACTGAGGCATTCGGGAACCCCTTC...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR GCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGCTGGCCTTCCAGTTTTaGATACTCTTCAAAGTACCA +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWLAFQF*ILFKVP
Trigger: TGGTACTTTGAAGAGTATGCAAAACTGGAAGGCCAG...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTGGGGGTGGGGAGAACTaGAGAAGCTACAAGATTGAG +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSGGGEN*RSYKIE
Trigger: CTCAATCTTGTAGCTTCTGCAGTTCTCCCCACCCCC...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATACGCAGCACACTGCATaGTGGCGTTTTCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNTQHTA*WRFLQL
Trigger: CAGTTGGAGAAAACGCCACCATGCAGTGTGCTGCGT...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTACGCAGCACACTGCATaGTGGCGTTTTCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSTQHTA*WRFLQL
Trigger: CAGTTGGAGAAAACGCCACCATGCAGTGTGCTGCGT...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAACCACCTGGAGGGCCTaGAGGGCCTCTCACTACAAG +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLTTWRA*RASHYK
Trigger: CTTGTAGTGAGAGGCCCTCCAGGCCCTCCAGGTGGT...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGCTCTACCCAGTGTATTaGTTGCTACCACGCGGAATT +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQLYPVY*LLPRGI
Trigger: AATTCCGCGTGGTAGCAACCAATACACTGGGTAGAG...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTACACCTACTTCTGTTaGGGCTTCACTGGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNYTYFC*GFTGSV
Trigger: GACGCTCCCAGTGAAGCCCCAACAGAAGTAGGTGTA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTACACCTACTTCTGTTaGGGCTTCACTGGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLYTYFC*GFTGSV
Trigger: GACGCTCCCAGTGAAGCCCCAACAGAAGTAGGTGTA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGAAAATACTGGGTGTCTaGCAGAAGGTTCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQKILGV*QKVLEP
Trigger: AGGCTCGAGAACCTTCTGCCAGACACCCAGTATTTT...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTACTTCTATAAAATACTaGGTGTCTGGCAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGTSIKY*VSGRRF
Trigger: GAACCTTCTGCCAGACACCCAGTATTTTATAGAAGT...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGTGCTTCTGTGATCTTTaGCTGTTTTACTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLCFCDL*LFYFSR
Trigger: CCTTGAGAAGTAAAACAGCCAAAGATCACAGAAGCA...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR CCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGCGGCGGAGCCCACCCTaGCTACTTGACAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKRRSPP*LLDSRS
Trigger: GCTTCTGCTGTCAAGTAGCCAGGGTGGGCTCCGCCG...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551295.7
CDS-3UTR CCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAATCCGCTGCAAACACCTaGGAGCGCATCTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYESAANT*ERISPP
Trigger: CGGTGGGGAGATGCGCTCCCAGGTGTTTGCAGCGGA...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547702.5
CDS-3UTR TCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCTCGTGCCCTACAGTTaGGTGAGACTTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSLVPYS*VRLFLP
Trigger: TGGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAG...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTTCCCTTCTTTTACTCTaGCCTCAGGACGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSSLLLL*PQDVPQ
Trigger: CTGAGGAACGTCCTGAGGTCAGAGTAAAAGAAGGGA...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTCCCTTCTTTTACTCTaGCCTCAGGACGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNSLLLL*PQDVPQ
Trigger: CTGAGGAACGTCCTGAGGTCAGAGTAAAAGAAGGGA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCCACCTCTGTGTCATTaGTGTGTTCTACCCACTCAG +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSPPLCH*CVLPTQ
Trigger: CTGAGTGGGTAGAACACATCAATGACACAGAGGTGG...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAGGACCAAACAAATGTaGGATCCAAGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLRTKQM*DPRQDQ
Trigger: TTGATCCTGCCTTGGATCTCACATTTGTTTGGTCCT...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCATCTTGGCTGGTGACTTaGACTCTGTTTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSSWLVT*TLFAAS
Trigger: AGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGA...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTTCTTGGCTGGTGACTTaGACTCTGTTTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVSWLVT*TLFAAS
Trigger: AGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGA...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGAGGTGCTTTCTTGGTaGAAGCCTCAATCATGTCAC +
Preference number: 4 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSEVLSW*KPQSCH
Trigger: GTGACATGATTGAGGCTTTCACCAAGAAAGCACCTC...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGAGGTGCTTTCTTGGTaGAAGCCTCAATCATGTCAC +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPEVLSW*KPQSCH
Trigger: GTGACATGATTGAGGCTTTCACCAAGAAAGCACCTC...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCACGACATGATCCCAGGTaGTTATATAGCGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPRHDPR*LYSVNQ
Trigger: CTGGTTCACGCTATATAATCACCTGGGATCATGTCG...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGTACCCACTCAGGGAATaGTTGAACATAAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWYPLRE*LNINSC
Trigger: GCAAGAATTTATGTTCAAGCATTCCCTGAGTGGGTA...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTGCCAGTAGAGATCACTaGCTATGTCCACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSASRDH*LCPPLC
Trigger: ACACAGAGGTGGACATAGGCAGTGATCTCTACTGGC...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTAAACTTTGGTTTCGGTaGAGCTTTAGGTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGKLWFR*SFRFAF
Trigger: GAATGCAAACCTAAAGCTGCACCGAAACCAAAGTTT...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTACGGCTCCAAGTAAGTaGCACAGAAGTGGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVTAPSK*HRSGSN
Trigger: ATTAGAGCCACTTCTGTGGCACTTACTTGGAGCCGT...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GGGGATAGGGTGGGTGCACCTCTAGTTCTGTCAATAGCTAGTTATATAACTTTACCAAGTAGACAAGGATaGCAAAGGCAGGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GDRVGAPLVLSIASYITLPSRQG*QRQAAV
Trigger: TACTGCTGCCTGCCTTTGGCATCCTTGTCTACTTGG...TAAAGTTATATAACTAGCTATTGACAGAACTAGAGGTGCACCCACCCTATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR GCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGCATTGGGTTAAATCATaGAACTGTCACAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWHWVKS*NCHRIR
Trigger: CCTGATTCTGTGACAGTTGCATGATTTAACCCAATG...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGATCTGGAAAATGGTATaGGGGGTCACAGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQIWKMV*GVTEKH
Trigger: GTGCTTCTCTGTGACCCCCCATACCATTTTCCAGAT...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAAGGATGGGCTTTCCTGTaGCCACACAAGGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SFTSTLKHISMHTMENEEGWAFL*PHKASR
Trigger: TCTACTGGCCTTGTGTGGCCACAGGAAAGCCCATCC...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCAGCATTTGCATAAATaGCTCCATATGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLQHLHK*LHMCFQ
Trigger: CTGAAAACACATATGGAGCCATTTATGCAAATGCTG...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTATTTCCTTCAATAATTaGGGGATCTGTCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGISFNN*GICLCI
Trigger: GATGCAAAGACAGATCCCCCAATTATTGAAGGAAAT...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTATGGTTTCATCTTTATaGACATATCGGCCAGTATCA +
Preference number: 4 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLMVSSL*TYRPVS
Trigger: TGATACTGGCCGATATGTCCATAAAGATGAAACCAT...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGCTTCTTCTTTGTCATaGGCAGCCCAATACCGAATC +
Preference number: 4 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSASSLS*AAQYRI
Trigger: GATTCGGTATTGGGCTGCCCATGACAAAGAAGAAGC...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGCTCAATCATGTCACTTaGAGGTCCACACCCTGCACT +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLLNHVT*RSTPCT
Trigger: AGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAG...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCTCAATCATGTCACTTaGAGGTCCACACCCTGCACT +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSLNHVT*RSTPCT
Trigger: AGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAG...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGTCCATCTCTGGGGATTaGGACTTCTATGGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQSISGD*DFYGVF
Trigger: AAACACTCCATAGAAGTCCCAATCCCCAGAGATGGA...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTTGGAGCCGCAGAAATTaGAAGGAATTGTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVWSRRN*KELWSS
Trigger: GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCA...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR TCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGACTTTTCCTTCCAGTaGTTCCTCTGGATAAATGGT +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQDFSFQ*FLWING
Trigger: ACCATTTATCCAGAGGAATCACTGGAAGGAAAAGTC...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGTGTATCGATCACTTGTaGGATCAACGTCCCCATTAT +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLCIDHL*DQRPHY
Trigger: ATAATGGGGACGTTGATCTCACAAGTGATCGATACA...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTAGATTGCCATTTGTCTaGGACACAAATCGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPRLPFV*DTNRRL
Trigger: TAAACGGCGATTTGTGTCTCAGACAAATGGCAATCT...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTGTCCCTTTACTCCATaGAAACTTTGGTTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQCPFTP*KLWFRC
Trigger: GCACCGAAACCAAAGTTTTCATGGAGTAAAGGGACA...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTGTCCCTTTACTCCATaGAAACTTTGGTTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVCPFTP*KLWFRC
Trigger: GCACCGAAACCAAAGTTTTCATGGAGTAAAGGGACA...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCGTATTCTGCTGCTATTaGCAAGCCACTCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSVFCCY*QATLSL
Trigger: AAGGGACAGAGTGGCTTGTCAATAGCAGCAGAATAC...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTGTATTCTGCTGCTATTaGCAAGCCACTCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSVFCCY*QATLSL
Trigger: AAGGGACAGAGTGGCTTGTCAATAGCAGCAGAATAC...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAAGGACCAAACAAATGTaGGATCCAAGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSRTKQM*DPRQDQ
Trigger: TTGATCCTGCCTTGGATCTCACATTTGTTTGGTCCT...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAAGGACCAAACAAATGTaGGATCCAAGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPRTKQM*DPRQDQ
Trigger: TTGATCCTGCCTTGGATCTCACATTTGTTTGGTCCT...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTATAGTGGTATTCTCTTaGCAAAGGCGCCCATGTTAT +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPIVVFS*QRRPCY
Trigger: ATAACATGGGCGCCTTTGTCAAGAGAATACCACTAT...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGAGTACTCTTGGCTGGTaGCTTGAACTCTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLSTLGW*LELCLQ
Trigger: CTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACT...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AAACCCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCCCTGAAATTTTGACTTaGGACACCACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: KPKAPTLGRHHRKDILFAPEILT*DTTPSP
Trigger: AGGAGATGGAGTGGTGTCTCAAGTCAAAATTTCAGG...GGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTTTCACAGAAATGGTaGGTGTCAACGATCACCAGG +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSLSQKW*VSTITR
Trigger: CCTGGTGATCGTTGACACTCACCATTTCTGTGAAAG...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGATTTTGGCCCATCAATaGATATACATCCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWILAHQ*IYILEL
Trigger: CAGTTCAAGGATGTATATGCATTGATGGGCCAAAAT...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGAAACTTTGGTTTCGGTaGAGCTTTAGGTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLKLWFR*SFRFAF
Trigger: GAATGCAAACCTAAAGCTGCACCGAAACCAAAGTTT...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTCAATTGTCTGGGCAGTaGATGTGTATCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVQLSGQ*MCIFQH
Trigger: ATGCTGGAAGATACACATGCACTGCCCAGACAATTG...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCAATTGTCTGGGCAGTaGATGTGTATCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVQLSGQ*MCIFQH
Trigger: ATGCTGGAAGATACACATGCACTGCCCAGACAATTG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTATCTGGAAAATGGTATaGGGGGTCACAGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSIWKMV*GVTEKH
Trigger: GTGCTTCTCTGTGACCCCCCATACCATTTTCCAGAT...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp AAATGTGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTGGGGATGGGCTTTCCTGTaGCCACACAAGGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: KCASSFSQLIKTQSTNTWGWAFL*PHKASR
Trigger: TCTACTGGCCTTGTGTGGCCACAGGAAAGCCCATCC...CCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGTTGTCCACAATTGTCTaGGCAGTGCATGTGTATCTT +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLLSTIV*AVHVYL
Trigger: AAGATACACATGCACTGCCCAGACAATTGTGGACAA...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTTTAATTCTGTTAGATaGTATACTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGFNSVR*YTGLSS
Trigger: AGAGGAGAGCCCAGTATACCATCTAACAGAATTAAA...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCAAGGCGCCCATGTTATaGTCAGCTCTCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSKAPML*SALCFF
Trigger: GAAGAAACAGAGAGCTGACCATAACATGGGCGCCTT...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACTGTTGGGGCTTCACTaGGAGCGTCTTGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSLLGLH*ERLVLN
Trigger: ATTCAGCACAAGACGCTCCCAGTGAAGCCCCAACAG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAAGGTTCTCGAGCCTaGCCGAGTACTCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKEGSRA*PSTLGW
Trigger: CCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTC...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCAAAATACTGGGTGTCTaGCAGAAGGTTCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSKILGV*QKVLEP
Trigger: AGGCTCGAGAACCTTCTGCCAGACACCCAGTATTTT...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATCGTATTCTCCATCTCTaGGGATTGGGACTTCTATGG +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNRILHL*GLGLLW
Trigger: CCATAGAAGTCCCAATCCCCAGAGATGGAGAATACG...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp GGGGATAGGGTGGGTGCACCTCTAGTTCTGTCAATAGCTAGTTATATAACTTTACGTATTCTCCATCTCTaGGGATTGGGACTTCTATGG +
Preference number: 4 (lower is better)
Translates to: GDRVGAPLVLSIASYITLRILHL*GLGLLW
Trigger: CCATAGAAGTCCCAATCCCCAGAGATGGAGAATACG...TAAAGTTATATAACTAGCTATTGACAGAACTAGAGGTGCACCCACCCTATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR CCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAGGGTGTCTTCTGAGCTaGGATGGGAACAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLGCLLS*DGNSSC
Trigger: ACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCC...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTGGAGCCGCAGAAATTaGAAGGAATTGTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLWSRRN*KELWSS
Trigger: GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR TCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCGACTTTTCCTTCCAGTaGTTCCTCTGGATAAATGGT +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVDFSFQ*FLWING
Trigger: ACCATTTATCCAGAGGAATCACTGGAAGGAAAAGTC...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp AAACCCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCAGATTGCCATTTGTCTaGGACACAAATCGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: KPKAPTLGRHHRKDILFARLPFV*DTNRRL
Trigger: TAAACGGCGATTTGTGTCTCAGACAAATGGCAATCT...GGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTGTCCCTTTACTCCATaGAAACTTTGGTTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNCPFTP*KLWFRC
Trigger: GCACCGAAACCAAAGTTTTCATGGAGTAAAGGGACA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTAGGACCAAACAAATGTaGGATCCAAGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSRTKQM*DPRQDQ
Trigger: TTGATCCTGCCTTGGATCTCACATTTGTTTGGTCCT...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCATTAGAAATAGGACTATaGTTGTCTGAACCACGGCTC +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPLEIGL*LSEPRL
Trigger: GAGCCGTGGTTCAGACAATCATAGTCCTATTTCTAA...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATGGAGTGTTTGTGAGTTaGATACAGCTTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNGVFVS*IQLAIM
Trigger: CATGATGGCAAGCTGTATTCAACTCACAAACACTCC...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGCCTGAAATTTTGACTTaGGACACCACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLPEILT*DTTPSP
Trigger: AGGAGATGGAGTGGTGTCTCAAGTCAAAATTTCAGG...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCGTTTATTCTTTTGGATaGAGGGGTTCCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSVYSFG*RGSRMP
Trigger: AGGCATTCGGGAACCCCTTCATCCAAAAGAATAAAC...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR TCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGTCCTCAGAAACTCCATaGCCATATCTTCTATACCAT +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQSSETP*PYLLYH
Trigger: ATGGTATAGAAGATATGGTCATGGAGTTTCTGAGGA...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTAGCACCTGTATATGGTaGTTTGACTTTCACTCTACA +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPSTCIW*FDFHST
Trigger: TGTAGAGTGAAAGTCAAATCACCATATACAGGTGCT...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAAAGGACTTCATGCTGTaGCCTCACAGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEKDFML*PHRQAQ
Trigger: CTGTGCCTGCCTGTGAGGTCACAGCATGAAGTCCTT...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547849.5
CDS-3UTR TCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGTTCTGATGCTTCTGTaGTCTTTGGCTGTTTTACTT +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQVLMLL*SLAVLL
Trigger: AAGTAAAACAGCCAAAGATCACAGAAGCATCAGAAC...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR GCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGTACCCACTCAGGGAATaGTTGAACATAAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLYPLRE*LNINSC
Trigger: GCAAGAATTTATGTTCAAGCATTCCCTGAGTGGGTA...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGACCAGCATGTTTCAGCTaGGCATTTCGGATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGPACFS*AFRISN
Trigger: ATTACTAATCCGAAATGCGCAGCTGAAACATGCTGG...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATGTCCACTGCTCTTGCTaGCTCCATATTTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNVHCSC*LHISFN
Trigger: ATTGAAGGAAATATGGAGGCAGCAAGAGCAGTGGAC...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGACTTTAACTTGAAATaGAGTGGAAGGGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVDFNLK*SGRAHG
Trigger: ACCATGAGCCCTTCCACTGCATTTCAAGTTAAAGTC...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTGGCCATTCAATAATATaGAGTACCCAAAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPGHSII*STQNSE
Trigger: CTCACTGTTTTGGGTACTGCATATTATTGAATGGCC...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAGGATGGGCTTTCCTGTaGCCACACAAGGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEGWAFL*PHKASR
Trigger: TCTACTGGCCTTGTGTGGCCACAGGAAAGCCCATCC...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAACGCAGCACACTGCATaGTGGCGTTTTCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLTQHTA*WRFLQL
Trigger: CAGTTGGAGAAAACGCCACCATGCAGTGTGCTGCGT...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGATTGTCCACAATTGTCTaGGCAGTGCATGTGTATCTT +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGLSTIV*AVHVYL
Trigger: AAGATACACATGCACTGCCCAGACAATTGTGGACAA...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTCCATCTCTGGGGATTaGGACTTCTATGGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLSISGD*DFYGVF
Trigger: AAACACTCCATAGAAGTCCCAATCCCCAGAGATGGA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTCCATCTCTGGGGATTaGGACTTCTATGGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNSISGD*DFYGVF
Trigger: AAACACTCCATAGAAGTCCCAATCCCCAGAGATGGA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CCA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTCAGAATCAGGTTAAGTaGTTTATAAGGCATATTGGA +
Preference number: 4 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGQNQVK*FIRHIG
Trigger: TCCAATATGCCTTATAAACCACTTAACCTGATTCTG...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAACAACGATCACCAGGTTaGAGGCAGGCTTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEQRSPG*RQACTD
Trigger: GTCTGTGCAAGCCTGCCTCCAACCTGGTGATCGTTG...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGGCAACAGAGAATATTTaGGCTCAAGACATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQATENI*AQDMVL
Trigger: CAGAACCATGTCTTGAGCCCAAATATTCTCTGTTGC...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR TCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTGACTTTTCCTTCCAGTaGTTCCTCTGGATAAATGGT +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSDFSFQ*FLWING
Trigger: ACCATTTATCCAGAGGAATCACTGGAAGGAAAAGTC...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTGTATCGATCACTTGTaGGATCAACGTCCCCATTAT +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLCIDHL*DQRPHY
Trigger: ATAATGGGGACGTTGATCTCACAAGTGATCGATACA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTAGATTGCCATTTGTCTaGGACACAAATCGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSRLPFV*DTNRRL
Trigger: TAAACGGCGATTTGTGTCTCAGACAAATGGCAATCT...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGTATACATCCTTGAACTaGACTACAATATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLYTSLN*TTISAG
Trigger: TCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATA...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AAACCCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCATCTTTCCAGTCATCTaGAAGAATAGTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: KPKAPTLGRHHRKDILFAIFPVI*KNSLGL
Trigger: CAGACCAAGACTATTCTTTCAGATGACTGGAAAGAT...GGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTCTATGGAGTGTTTGTaGGTTGAATACAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLSMECL*VEYSLP
Trigger: TGGCAAGCTGTATTCAACTCACAAACACTCCATAGA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCTCTATGGAGTGTTTGTaGGTTGAATACAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSSMECL*VEYSLP
Trigger: TGGCAAGCTGTATTCAACTCACAAACACTCCATAGA...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTCCTCAGAAACTCCATaGCCATATCTTCTATACCAT +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVSSETP*PYLLYH
Trigger: ATGGTATAGAAGATATGGTCATGGAGTTTCTGAGGA...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCATCCTCAGAAACTCCATaGCCATATCTTCTATACCAT +
Preference number: 4 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSSSETP*PYLLYH
Trigger: ATGGTATAGAAGATATGGTCATGGAGTTTCTGAGGA...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGTTTTCAACCTACAGGTaGCTTTTTGATCTGACATCT +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQFSTYR*LFDLTS
Trigger: AGATGTCAGATCAAAAAGTCACCTGTAGGTTGAAAA...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAACGATCTACAAAAGCTaGTGGCAGGAGTCAATAAAA +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGTIYKS*WQESIK
Trigger: TTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGT...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTATGGTATTGATTGGCTaGTCTTCAAAAATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPMVLIG*SSKIGP
Trigger: TGGACCAATTTTTGAAGAGCAGCCAATCAATACCAT...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCGGAAGCCTCAACATTTaGAATGTAGAGATTGCCATT +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVGSLNI*NVEIAI
Trigger: AATGGCAATCTCTACATTGCAAATGTTGAGGCTTCC...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATCAAAGCAGGAATAATTaGCTTTGTCGGAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNQSRNN*LCRKPQ
Trigger: TTGAGGCTTCCGACAAAGGCAATTATTCCTGCTTTG...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTATTTTGGCCCATCAATaGATATACATCCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPILAHQ*IYILEL
Trigger: CAGTTCAAGGATGTATATGCATTGATGGGCCAAAAT...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCACCTCACATTCATAGATaGCTTCATCTTCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSPHIHR*LHLLAE
Trigger: TTCAGCTAGAAGATGAAGGCATCTATGAATGTGAGG...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCCTCACATTCATAGATaGCTTCATCTTCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVPHIHR*LHLLAE
Trigger: TTCAGCTAGAAGATGAAGGCATCTATGAATGTGAGG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGATACCCACTCAGGGAATaGTTGAACATAAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGYPLRE*LNINSC
Trigger: GCAAGAATTTATGTTCAAGCATTCCCTGAGTGGGTA...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGAAGGACGCAGCACACTaGATGGTGGCGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLKDAAH*MVAFSP
Trigger: TGGAGAAAACGCCACCATGCAGTGTGCTGCGTCCTT...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCAGCATGTTTCAGCTaGGCATTTCGGATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSPACFS*AFRISN
Trigger: ATTACTAATCCGAAATGCGCAGCTGAAACATGCTGG...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AAACCCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCGACTTGAACTCTGTTTaGAGCTTCTTCTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: KPKAPTLGRHHRKDILFADLNSV*SFFFVM
Trigger: CATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTC...GGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGGGGGGTGGGGAGAACTaGAGAAGCTACAAGATTGAG +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLGGGEN*RSYKIE
Trigger: CTCAATCTTGTAGCTTCTGCAGTTCTCCCCACCCCC...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGAGGTATTGGAATGAGTaGGATGAATTTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQRYWNE*DEFAEH
Trigger: GTGTTCAGCAAATTCATCCCACTCATTCCAATACCT...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTCAGCATTTGCATAAATaGCTCCATATGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPQHLHK*LHMCFQ
Trigger: CTGAAAACACATATGGAGCCATTTATGCAAATGCTG...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGGATATCGGCATTAATTaGGGCCAATATAATTCGCGT +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQDIGIN*GQYNSR
Trigger: ACGCGAATTATATTGGCCCCAATTAATGCCGATATC...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTACTTCTATAAAATACTaGGTGTCTGGCAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVTSIKY*VSGRRF
Trigger: GAACCTTCTGCCAGACACCCAGTATTTTATAGAAGT...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACAAAGCACCAACACTTaGGAGACACCATCGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSQSTNT*ETPSER
Trigger: TCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
3UTR CAA 72 bp CACATGCTATCCATTTTCACTTTCCAATTCCAGGAATaGTTCCAAAAACCCTACAGAGCCATGGTAGGACTT +
Preference number: 4 (lower is better)
Translates to: HMLSIFTFQFQE*FQKPYRAMVGL
Trigger: AAGTCCTACCATGGCTCTGTAGGGTTTTTGGAACAATTCCTGGAATTGGAAAGTGAAAATGGATAGCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGCTCGTGCCCTACAGTTaGGTGAGACTTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLLVPYS*VRLFLP
Trigger: TGGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAG...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTCCCTTCTTTTACTCTaGCCTCAGGACGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLSLLLL*PQDVPQ
Trigger: CTGAGGAACGTCCTGAGGTCAGAGTAAAAGAAGGGA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTATACATCCTTGAACTaGACTACAATATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVYTSLN*TTISAG
Trigger: TCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATA...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGCCACCTCTGTGTCATTaGTGTGTTCTACCCACTCAG +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLPPLCH*CVLPTQ
Trigger: CTGAGTGGGTAGAACACATCAATGACACAGAGGTGG...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAAGGAGTGTTTGTGAGTTaGATACAGCTTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: SFTSTLKHISMHTMENEEGVFVS*IQLAIM
Trigger: CATGATGGCAAGCTGTATTCAACTCACAAACACTCC...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCAGGAGTGTTTGTGAGTTaGATACAGCTTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSGVFVS*IQLAIM
Trigger: CATGATGGCAAGCTGTATTCAACTCACAAACACTCC...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAAGTTTATTCTTTTGGATaGAGGGGTTCCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: SFTSTLKHISMHTMENEEVYSFG*RGSRMP
Trigger: AGGCATTCGGGAACCCCTTCATCCAAAAGAATAAAC...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCTGTATATGGTGATTTaGCTTTCACTCTACAGCCTA +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSLYMVI*LSLYSL
Trigger: TAGGCTGTAGAGTGAAAGTCAAATCACCATATACAG...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGATCTTGCTACTCAGATaGGGGTTTCCCCCACATGCT +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLILLLR*GFPPHA
Trigger: AGCATGTGGGGGAAACCCTCATCTGAGTAGCAAGAT...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCATGTGGATTTTCCTTCTaGAATTTTGACTTGAGACAC +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPCGFSF*NFDLRH
Trigger: GTGTCTCAAGTCAAAATTTCAGAAGGAAAATCCACA...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS-3UTR GCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAATGGTATTGATTGGCTaGTCTTCAAAAATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPMVLIG*SSKIGP
Trigger: TGGACCAATTTTTGAAGAGCAGCCAATCAATACCAT...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGATGGTATTGATTGGCTaGTCTTCAAAAATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQMVLIG*SSKIGP
Trigger: TGGACCAATTTTTGAAGAGCAGCCAATCAATACCAT...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAATGGTATTGATTGGCTaGTCTTCAAAAATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGMVLIG*SSKIGP
Trigger: TGGACCAATTTTTGAAGAGCAGCCAATCAATACCAT...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTTGCAATGTAGAGATTaGCATTTGTCTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVLQCRD*HLSETQ
Trigger: TTGTGTCTCAGACAAATGGCAATCTCTACATTGCAA...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTACCCACTCAGGGAATaGTTGAACATAAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNYPLRE*LNINSC
Trigger: GCAAGAATTTATGTTCAAGCATTCCCTGAGTGGGTA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAAACCCAGTGTATTGGTTaGTACCACGCGGAATTCATA +
Preference number: 4 (lower is better)
Translates to: SFTSTLKHISMHTMENEETQCIG*YHAEFI
Trigger: TATGAATTCCGCGTGGTAGCAACCAATACACTGGGT...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGGACTTGAACTCTGTTTaGAGCTTCTTCTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLDLNSV*SFFFVM
Trigger: CATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTC...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAGAGTTGAATACAGCTTaGCATCATGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLELNTA*HHAGHQ
Trigger: CTGATGGCCAGCATGATGGCAAGCTGTATTCAACTC...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAAGGGGTTCCCGAATaGCTCAGTCATCATGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKEGVPE*LSHHVC
Trigger: ACACACATGATGACTGAGGCATTCGGGAACCCCTTC...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR GCA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCATTGGGTTAAATCATaGAACTGTCACAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSHWVKS*NCHRIR
Trigger: CCTGATTCTGTGACAGTTGCATGATTTAACCCAATG...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGAGAATGAAGAAATGTaGATCTTCCTTTTCACAACT +
Preference number: 4 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQENEEM*IFLFTT
Trigger: AGTTGTGAAAAGGAAGATGCACATTTCTTCATTCTC...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGATGTTCGTTCAGGTATTaGAATGAGTGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGCSFRY*NEWDEF
Trigger: AAATTCATCCCACTCATTCCAATACCTGAACGAACA...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGCAGCATTTGCATAAATaGCTCCATATGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQQHLHK*LHMCFQ
Trigger: CTGAAAACACATATGGAGCCATTTATGCAAATGCTG...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCAGCATTTGCATAAATaGCTCCATATGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVQHLHK*LHMCFQ
Trigger: CTGAAAACACATATGGAGCCATTTATGCAAATGCTG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTATTCATTTCAAAAGTTaGAGCCAACGCCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVIHFKS*SQRQDL
Trigger: AAGATCTTGGCGTTGGCTCCAACTTTTGAAATGAAT...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAATTCATTTCAAAAGTTaGAGCCAACGCCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGIHFKS*SQRQDL
Trigger: AAGATCTTGGCGTTGGCTCCAACTTTTGAAATGAAT...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCATTCATTTCAAAAGTTaGAGCCAACGCCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVIHFKS*SQRQDL
Trigger: AAGATCTTGGCGTTGGCTCCAACTTTTGAAATGAAT...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAATTTCCTTCAATAATTaGGGGATCTGTCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPISFNN*GICLCI
Trigger: GATGCAAAGACAGATCCCCCAATTATTGAAGGAAAT...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTTTTAATTCTGTTAGATaGTATACTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVFNSVR*YTGLSS
Trigger: AGAGGAGAGCCCAGTATACCATCTAACAGAATTAAA...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAAAAAATACTGGGTGTCTaGCAGAAGGTTCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQKILGV*QKVLEP
Trigger: AGGCTCGAGAACCTTCTGCCAGACACCCAGTATTTT...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGACTTCTATAAAATACTaGGTGTCTGGCAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLTSIKY*VSGRRF
Trigger: GAACCTTCTGCCAGACACCCAGTATTTTATAGAAGT...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTATACATCCTTGAACTaGACTACAATATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLYTSLN*TTISAG
Trigger: TCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGGTATTCTGCTGCTATTaGCAAGCCACTCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLVFCCY*QATLSL
Trigger: AAGGGACAGAGTGGCTTGTCAATAGCAGCAGAATAC...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAATTAGAAATAGGACTATaGTTGTCTGAACCACGGCTC +
Preference number: 4 (lower is better)
Translates to: SFTSTLKHISMHTMENEELEIGL*LSEPRL
Trigger: GAGCCGTGGTTCAGACAATCATAGTCCTATTTCTAA...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCAATAGTGGTATTCTCTTaGCAAAGGCGCCCATGTTAT +
Preference number: 4 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSIVVFS*QRRPCY
Trigger: ATAACATGGGCGCCTTTGTCAAGAGAATACCACTAT...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTACCTGAAATTTTGACTTaGGACACCACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLPEILT*DTTPSP
Trigger: AGGAGATGGAGTGGTGTCTCAAGTCAAAATTTCAGG...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAGTGCACCTGAAATTTTaGCTTGAGACACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLVHLKF*LETPLH
Trigger: ATGGAGTGGTGTCTCAAGTCAAAATTTCAGGTGCAC...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAGTTTATTCTTTTGGATaGAGGGGTTCCCGAATGCCT +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLVYSFG*RGSRMP
Trigger: AGGCATTCGGGAACCCCTTCATCCAAAAGAATAAAC...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR TCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTTTCAACCTACAGGTaGCTTTTTGATCTGACATCT +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLFSTYR*LFDLTS
Trigger: AGATGTCAGATCAAAAAGTCACCTGTAGGTTGAAAA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGCTTTCACAGAAATGGTaGGTGTCAACGATCACCAGG +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLLSQKW*VSTITR
Trigger: CCTGGTGATCGTTGACACTCACCATTTCTGTGAAAG...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTGCAATGTAGAGATTaGCATTTGTCTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLLQCRD*HLSETQ
Trigger: TTGTGTCTCAGACAAATGGCAATCTCTACATTGCAA...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACAAAGCAGGAATAATTaGCTTTGTCGGAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSQSRNN*LCRKPQ
Trigger: TTGAGGCTTCCGACAAAGGCAATTATTCCTGCTTTG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGATTTTGGCCCATCAATaGATATACATCCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLILAHQ*IYILEL
Trigger: CAGTTCAAGGATGTATATGCATTGATGGGCCAAAAT...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACCAGCATGTTTCAGCTaGGCATTTCGGATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSPACFS*AFRISN
Trigger: ATTACTAATCCGAAATGCGCAGCTGAAACATGCTGG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAACCAGCATGTTTCAGCTaGGCATTTCGGATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SFTSTLKHISMHTMENEEPACFS*AFRISN
Trigger: ATTACTAATCCGAAATGCGCAGCTGAAACATGCTGG...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTGTAACCAAAATTGTTaGCATAGTGGTATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQCNQNC*HSGILL
Trigger: CAAGAGAATACCACTATGGCAACAATTTTGGTTACA...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCATGTAACCAAAATTGTTaGCATAGTGGTATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSCNQNC*HSGILL
Trigger: CAAGAGAATACCACTATGGCAACAATTTTGGTTACA...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAGTTGAATACAGCTTaGCATCATGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKELNTA*HHAGHQ
Trigger: CTGATGGCCAGCATGATGGCAAGCTGTATTCAACTC...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGGTTAAAAGGACTTCATaGTGTGACCTCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLVKRTS*CDLTGR
Trigger: CCTGCCTGTGAGGTCACAGCATGAAGTCCTTTTAAC...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547849.5
CDS-3UTR GCA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGATCTTTACTAAAATCTTaGTACTCAGATGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGSLLKS*YSDEGF
Trigger: GAAACCCTCATCTGAGTAGCAAGATTTTAGTAAAGA...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGATCTGGAAAATGGTATaGGGGGTCACAGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLIWKMV*GVTEKH
Trigger: GTGCTTCTCTGTGACCCCCCATACCATTTTCCAGAT...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTTGTTCGTTCAGGTATTaGAATGAGTGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSCSFRY*NEWDEF
Trigger: AAATTCATCCCACTCATTCCAATACCTGAACGAACA...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTGTTCGTTCAGGTATTaGAATGAGTGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNCSFRY*NEWDEF
Trigger: AAATTCATCCCACTCATTCCAATACCTGAACGAACA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAGCATTTGCATAAATaGCTCCATATGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSQHLHK*LHMCFQ
Trigger: CTGAAAACACATATGGAGCCATTTATGCAAATGCTG...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATTGTCCACAATTGTCTaGGCAGTGCATGTGTATCTT +
Preference number: 4 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSLSTIV*AVHVYL
Trigger: AAGATACACATGCACTGCCCAGACAATTGTGGACAA...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGCAAAGCACCAACACTTaGGAGACACCATCGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKQSTNT*ETPSER
Trigger: TCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTG...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTGTCCCTTTACTCCATaGAAACTTTGGTTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLCPFTP*KLWFRC
Trigger: GCACCGAAACCAAAGTTTTCATGGAGTAAAGGGACA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAAGGACCAAACAAATGTaGGATCCAAGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYERTKQM*DPRQDQ
Trigger: TTGATCCTGCCTTGGATCTCACATTTGTTTGGTCCT...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTATTAGAAATAGGACTATaGTTGTCTGAACCACGGCTC +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLLEIGL*LSEPRL
Trigger: GAGCCGTGGTTCAGACAATCATAGTCCTATTTCTAA...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AAATGTGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTGGTCTATGGAGTGTTTGTaGGTTGAATACAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: KCASSFSQLIKTQSTNTWSMECL*VEYSLP
Trigger: TGGCAAGCTGTATTCAACTCACAAACACTCCATAGA...CCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGAAACACCTTATGTGTTaGCTTATCTGTCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLKHLMC*LICRPG
Trigger: CCCAGGACGACAGATAAGTCAACACATAAGGTGTTT...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547849.5
CDS-3UTR GCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTACAAAGCAGGAATAATTaGCTTTGTCGGAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLQSRNN*LCRKPQ
Trigger: TTGAGGCTTCCGACAAAGGCAATTATTCCTGCTTTG...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAACCTCACATTCATAGATaGCTTCATCTTCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SFTSTLKHISMHTMENEEPHIHR*LHLLAE
Trigger: TTCAGCTAGAAGATGAAGGCATCTATGAATGTGAGG...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp AAATGTGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTGGCCAGCATGTTTCAGCTaGGCATTTCGGATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: KCASSFSQLIKTQSTNTWPACFS*AFRISN
Trigger: ATTACTAATCCGAAATGCGCAGCTGAAACATGCTGG...CCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGCAATTGTCTGGGCAGTaGATGTGTATCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKQLSGQ*MCIFQH
Trigger: ATGCTGGAAGATACACATGCACTGCCCAGACAATTG...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTGTAACCAAAATTGTTaGCATAGTGGTATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNCNQNC*HSGILL
Trigger: CAAGAGAATACCACTATGGCAACAATTTTGGTTACA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCAAGGTATTGGAATGAGTaGGATGAATTTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSRYWNE*DEFAEH
Trigger: GTGTTCAGCAAATTCATCCCACTCATTCCAATACCT...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTATTGTCCACAATTGTCTaGGCAGTGCATGTGTATCTT +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLLSTIV*AVHVYL
Trigger: AAGATACACATGCACTGCCCAGACAATTGTGGACAA...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
3UTR CAA 72 bp CTTTTCACAACTTATAAAAACCCAAAGCACCAACACTaGGGAGACACCATCGGAAAGACATATTATTTGCCT +
Preference number: 4 (lower is better)
Translates to: LFTTYKNPKHQH*GDTIGKTYYLP
Trigger: AGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTGTATCGATCACTTGTaGGATCAACGTCCCCATTAT +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLCIDHL*DQRPHY
Trigger: ATAATGGGGACGTTGATCTCACAAGTGATCGATACA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAACTGTATATGGTGATTTaGCTTTCACTCTACAGCCTA +
Preference number: 4 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQLYMVI*LSLYSL
Trigger: TAGGCTGTAGAGTGAAAGTCAAATCACCATATACAG...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp AAATGTGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTGGGGAAGCCTCAACATTTaGAATGTAGAGATTGCCATT +
Preference number: 4 (lower is better)
Translates to: KCASSFSQLIKTQSTNTWGSLNI*NVEIAI
Trigger: AATGGCAATCTCTACATTGCAAATGTTGAGGCTTCC...CCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGCAAAGCAGGAATAATTaGCTTTGTCGGAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLQSRNN*LCRKPQ
Trigger: TTGAGGCTTCCGACAAAGGCAATTATTCCTGCTTTG...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAACAAAGCAGGAATAATTaGCTTTGTCGGAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEQSRNN*LCRKPQ
Trigger: TTGAGGCTTCCGACAAAGGCAATTATTCCTGCTTTG...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTACCTCACATTCATAGATaGCTTCATCTTCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLPHIHR*LHLLAE
Trigger: TTCAGCTAGAAGATGAAGGCATCTATGAATGTGAGG...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAGGCCATTCAATAATATaGAGTACCCAAAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLGHSII*STQNSE
Trigger: CTCACTGTTTTGGGTACTGCATATTATTGAATGGCC...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTCTGGCCTTCCAGTTTTaGATACTCTTCAAAGTACCA +
Preference number: 4 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFLAFQF*ILFKVP
Trigger: TGGTACTTTGAAGAGTATGCAAAACTGGAAGGCCAG...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp AAATGTGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTGGGATATCGGCATTAATTaGGGCCAATATAATTCGCGT +
Preference number: 4 (lower is better)
Translates to: KCASSFSQLIKTQSTNTWDIGIN*GQYNSR
Trigger: ACGCGAATTATATTGGCCCCAATTAATGCCGATATC...CCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTTGTCCACAATTGTCTaGGCAGTGCATGTGTATCTT +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLLSTIV*AVHVYL
Trigger: AAGATACACATGCACTGCCCAGACAATTGTGGACAA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTATATACATCCTTGAACTaGACTACAATATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLYTSLN*TTISAG
Trigger: TCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATA...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTCCTCAGAAACTCCATaGCCATATCTTCTATACCAT +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLSSETP*PYLLYH
Trigger: ATGGTATAGAAGATATGGTCATGGAGTTTCTGAGGA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR TCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGAGCACCTGTATATGGTaGTTTGACTTTCACTCTACA +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKSTCIW*FDFHST
Trigger: TGTAGAGTGAAAGTCAAATCACCATATACAGGTGCT...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAACGATCTACAAAAGCTaGTGGCAGGAGTCAATAAAA +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYETIYKS*WQESIK
Trigger: TTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGT...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGGGAAGCCTCAACATTTaGAATGTAGAGATTGCCATT +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLGSLNI*NVEIAI
Trigger: AATGGCAATCTCTACATTGCAAATGTTGAGGCTTCC...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGCCTCACATTCATAGATaGCTTCATCTTCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLPHIHR*LHLLAE
Trigger: TTCAGCTAGAAGATGAAGGCATCTATGAATGTGAGG...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTACCCACTCAGGGAATaGTTGAACATAAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLYPLRE*LNINSC
Trigger: GCAAGAATTTATGTTCAAGCATTCCCTGAGTGGGTA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGAAACTTTGGTTTCGGTaGAGCTTTAGGTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKKLWFR*SFRFAF
Trigger: GAATGCAAACCTAAAGCTGCACCGAAACCAAAGTTT...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR GCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAAAACTTTGGTTTCGGTaGAGCTTTAGGTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEKLWFR*SFRFAF
Trigger: GAATGCAAACCTAAAGCTGCACCGAAACCAAAGTTT...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTAGGTATTGGAATGAGTaGGATGAATTTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFRYWNE*DEFAEH
Trigger: GTGTTCAGCAAATTCATCCCACTCATTCCAATACCT...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGAGGTATTGGAATGAGTaGGATGAATTTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLRYWNE*DEFAEH
Trigger: GTGTTCAGCAAATTCATCCCACTCATTCCAATACCT...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAATTCATTTCAAAAGTTaGAGCCAACGCCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLIHFKS*SQRQDL
Trigger: AAGATCTTGGCGTTGGCTCCAACTTTTGAAATGAAT...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGGATATCGGCATTAATTaGGGCCAATATAATTCGCGT +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLDIGIN*GQYNSR
Trigger: ACGCGAATTATATTGGCCCCAATTAATGCCGATATC...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CCA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAAATTTCCTTCAATAATTaGGGGATCTGTCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQISFNN*GICLCI
Trigger: GATGCAAAGACAGATCCCCCAATTATTGAAGGAAAT...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR TCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTATACATCCTTGAACTaGACTACAATATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLYTSLN*TTISAG
Trigger: TCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAATTGCAATGTAGAGATTaGCATTTGTCTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYELQCRD*HLSETQ
Trigger: TTGTGTCTCAGACAAATGGCAATCTCTACATTGCAA...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTTTGCAATGTAGAGATTaGCATTTGTCTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFLQCRD*HLSETQ
Trigger: TTGTGTCTCAGACAAATGGCAATCTCTACATTGCAA...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAATTTTGGCCCATCAATaGATATACATCCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEILAHQ*IYILEL
Trigger: CAGTTCAAGGATGTATATGCATTGATGGGCCAAAAT...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR GCA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAAGAGAATGAAGAAATGTaGATCTTCCTTTTCACAACT +
Preference number: 4 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQENEEM*IFLFTT
Trigger: AGTTGTGAAAAGGAAGATGCACATTTCTTCATTCTC...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGTGTTCGTTCAGGTATTaGAATGAGTGGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKCSFRY*NEWDEF
Trigger: AAATTCATCCCACTCATTCCAATACCTGAACGAACA...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGATTCATTTCAAAAGTTaGAGCCAACGCCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKIHFKS*SQRQDL
Trigger: AAGATCTTGGCGTTGGCTCCAACTTTTGAAATGAAT...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CCA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTATGGTTTCATCTTTATaGACATATCGGCCAGTATCA +
Preference number: 4 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFMVSSL*TYRPVS
Trigger: TGATACTGGCCGATATGTCCATAAAGATGAAACCAT...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CCA 90 bp AAATGTGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTGGCAGAATCAGGTTAAGTaGTTTATAAGGCATATTGGA +
Preference number: 4 (lower is better)
Translates to: KCASSFSQLIKTQSTNTWQNQVK*FIRHIG
Trigger: TCCAATATGCCTTATAAACCACTTAACCTGATTCTG...CCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR GCA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTCTTTACTAAAATCTTaGTACTCAGATGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLSLLKS*YSDEGF
Trigger: GAAACCCTCATCTGAGTAGCAAGATTTTAGTAAAGA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS CCA 90 bp CCCTGCACTATTGCAGGCCCCGACTTCTATAAAATACTGGGTGTCTaGCAGAAGGTTCTCGAGCCTGGCCGAGTACTCTTGGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: PCTIAGPDFYKILGV*QKVLEPGRVLLAGD
Trigger: GTCACCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTCTGCCAGACACCCAGTATTTTATAGAAGTCGGGGCCTGCAATAGTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS TCA 90 bp TGTCTGGCAGAAGGTTCTCGAGCCTGGCCGAGTACTCTTGGCTGGTaGCTTGAACTCTGTTTGCAGCTTCTTCTTTGTCATGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: CLAEGSRAWPSTLGW*LELCLQLLLCHGQP
Trigger: GGGCTGCCCATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTCTGCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS GCA 90 bp AATACGCCTCTCTCCTGCAGCAGAAAGCAAGTTAAAAGGACTTCATaGTGTGACCTCACAGGCAGGCACAGCCGCTCCCATCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: NTPLSCSRKQVKRTS*CDLTGRHSRSHPSA
Trigger: GGCTGAAGGATGGGAGCGGCTGTGCCTGCCTGTGAGGTCACAGCATGAAGTCCTTTTAACTTGCTTTCTGCTGCAGGAGAGAGGCGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547849.5
CDS CCA 90 bp CAGTTTTGCGGGCTGTACAAGAAGCCTGGCACTAGCGTTTGCTTCTaGTCAGGGCCTCAGGAGACCTTTAATCATGGCAAAGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: QFCGLYKKPGTSVCF*SGPQETFNHGKGAA
Trigger: TGCAGCCCCTTTGCCATGATTAAAGGTCTCCTGAGGCCCTGACCAGAAGCAAACGCTAGTGCCAGGCTTCTTGTACAGCCCGCAAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548005.5
CDS TCA 90 bp GGCAGAAGGTTCTCGAGCCTGGCCGAGTACTCTTGGCTGGTGACTTaGACTCTGTTTGCAGCTTCTTCTTTGTCATGGGCAGCCCAATAC +
Preference number: 5 (lower is better)
Translates to: GRRFSSLAEYSWLVT*TLFAASSLSWAAQY
Trigger: GTATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACCCTCTACCCAGTGTATaGGTTGCTACCACGCGGAAT +
Preference number: 5 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNPLPSV*VATTRN
Trigger: ATTCCGCGTGGTAGCAACCAATACACTGGGTAGAGG...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTCCTGGCCGAGTACTCTaGGCTGGTGACTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGPGRVL*AGDLNS
Trigger: AGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGG...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGCCACACCCTGCACTATaGCAGGCCCCGACTTCTATA +
Preference number: 5 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLPHPAL*QAPTSI
Trigger: TATAGAAGTCGGGGCCTGCAATAGTGCAGGGTGTGG...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGTAAGCCGAGAAGACTaGGGGATAGGGTGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWVSRED*GIGWVH
Trigger: GTGCACCCACCCTATCCCCAAGTCTTCTCGGCTTAC...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTGTAAGCCGAGAAGACTaGGGGATAGGGTGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGVSRED*GIGWVH
Trigger: GTGCACCCACCCTATCCCCAAGTCTTCTCGGCTTAC...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CAA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGCCTCTACCCAGTGTATaGGTTGCTACCACGCGGAAT +
Preference number: 5 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLPLPSV*VATTRN
Trigger: ATTCCGCGTGGTAGCAACCAATACACTGGGTAGAGG...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGTTACACCTACTTCTGTaGGGGCTTCACTGGGAGCGT +
Preference number: 5 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLLHLLL*GLHWER
Trigger: ACGCTCCCAGTGAAGCCCCAACAGAAGTAGGTGTAA...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACCTCTTGGCTGGTGACTaGAACTCTGTTTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNLLAGD*NSVCSF
Trigger: GAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAG...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGCCAAAGCACCAACACTaGGGAGACACCATCGGAAAG +
Preference number: 5 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLPKHQH*GDTIGK
Trigger: CTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS GCA 90 bp CTCGAGCCTGGCCGAGTACTCTTGGCTGGTGACTTGAACTCTGTTTaGAGCTTCTTCTTTGTCATGGGCAGCCCAATACCGAATCTGATA +
Preference number: 5 (lower is better)
Translates to: LEPGRVLLAGDLNSV*SFFFVMGSPIPNLI
Trigger: TATCAGATTCGGTATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGGCTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS CCA 90 bp CTGGCTAGGAGGTGCTTTCTTGGTGAAAGCCTCAATCATGTCACTTaGAGGTCCACACCCTGCACTATTGCAGGCCCCGACTTCTATAAA +
Preference number: 5 (lower is better)
Translates to: LARRCFLGESLNHVT*RSTPCTIAGPDFYK
Trigger: TTTATAGAAGTCGGGGCCTGCAATAGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGGCTTTCACCAAGAAAGCACCTCCTAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTGCTCGTGCCCTACAGTaGAGTGAGACTTTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGARALQ*SETFPS
Trigger: GGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAGC...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTTACACCTACTTCTGTaGGGGCTTCACTGGGAGCGT +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGLHLLL*GLHWER
Trigger: ACGCTCCCAGTGAAGCCCCAACAGAAGTAGGTGTAA...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGCTCCATCTCTGGGGATaGGGACTTCTATGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLLHLWG*GLLWSV
Trigger: AACACTCCATAGAAGTCCCAATCCCCAGAGATGGAG...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAAGGTTGGAGGCAGGCTaGCACAGACGGGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGRLEAG*HRRGER
Trigger: CCTTTCTCCCCGTCTGTGCAAGCCTGCCTCCAACCT...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS CCA 90 bp CTCCATCACTGTGCGCGCGAACCTCCACAACGTATTCTCCATCTCTaGGGATTGGGACTTCTATGGAGTGTTTGTGAGTTGAATACAGCT +
Preference number: 5 (lower is better)
Translates to: LHHCAREPPQRILHL*GLGLLWSVCELNTA
Trigger: AGCTGTATTCAACTCACAAACACTCCATAGAAGTCCCAATCCCCAGAGATGGAGAATACGTTGTGGAGGTTCGCGCGCACAGTGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGGCTCGTGCCCTACAGTaGAGTGAGACTTTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLARALQ*SETFPS
Trigger: GGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAGC...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGTATTCTGCTGCTATaGACAAGCCACTCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLSILLL*TSHSVP
Trigger: AGGGACAGAGTGGCTTGTCAATAGCAGCAGAATACT...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTCTCTTGGCTGGTGACTaGAACTCTGTTTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGLLAGD*NSVCSF
Trigger: GAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAG...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGCCTGGCCGAGTACTCTaGGCTGGTGACTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQPGRVL*AGDLNS
Trigger: AGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGG...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGCCACACCCTGCACTATaGCAGGCCCCGACTTCTATA +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQPHPAL*QAPTSI
Trigger: TATAGAAGTCGGGGCCTGCAATAGTGCAGGGTGTGG...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTCCTGGCCTTCCAGTTTaGCATACTCTTCAAAGTACC +
Preference number: 5 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGPGLPV*HTLQST
Trigger: GGTACTTTGAAGAGTATGCAAAACTGGAAGGCCAGG...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTGGAAAGACATATTATTaGCCTCCTCCTGGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLGKTYY*PPPGLP
Trigger: TGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCC...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS GCA 90 bp TTTCTTGGTGAAAGCCTCAATCATGTCACTTGGAGGTCCACACCCTaGACTATTGCAGGCCCCGACTTCTATAAAATACTGGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: FLGESLNHVTWRSTP*TIAGPDFYKILGVW
Trigger: CCAGACACCCAGTATTTTATAGAAGTCGGGGCCTGCAATAGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGGCTTTCACCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTCGGAAGCCTCAACATTaGCAATGTAGAGATTGCCAT +
Preference number: 5 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGRKPQH*QCRDCH
Trigger: ATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCG...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGGATGGGAACCCACTCAGGGAATGCTaGAACATAAATTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: RNCGHPRVEGCLLSWDGNPLREC*NINSCL
Trigger: CAAGCAAGAATTTATGTTCAAGCATTCCCTGAGTGG...GTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTTTAAGTCCACTGCTCTaGCTGCCTCCATATTTCCTT +
Preference number: 5 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGLSPLL*LPPYFL
Trigger: AAGGAAATATGGAGGCAGCAAGAGCAGTGGACTTAA...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGCCTCTACCCAGTGTATaGGTTGCTACCACGCGGAAT +
Preference number: 5 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLPLPSV*VATTRN
Trigger: ATTCCGCGTGGTAGCAACCAATACACTGGGTAGAGG...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGCTGAAGGAGCCACATTaGGTGCAGCACCGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQLKEPH*VQHRLF
Trigger: AAACAGACGGTGCTGCACCAAATGTGGCTCCTTCAG...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTTTACACCTACTTCTGTaGGGGCTTCACTGGGAGCGT +
Preference number: 5 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPLHLLL*GLHWER
Trigger: ACGCTCCCAGTGAAGCCCCAACAGAAGTAGGTGTAA...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTTTGCAGCTTCTTCTTaGTCATGGGCAGCCCAATAC +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGFAASS*SWAAQY
Trigger: GTATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAA...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGCCTGGCCGAGTACTCTaGGCTGGTGACTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQPGRVL*AGDLNS
Trigger: AGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGG...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCACCACACCCTGCACTATaGCAGGCCCCGACTTCTATA +
Preference number: 5 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPPHPAL*QAPTSI
Trigger: TATAGAAGTCGGGGCCTGCAATAGTGCAGGGTGTGG...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGATGGAGCCGCAGAAATaGGAAGGAATTGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWMEPQK*EGIVVI
Trigger: GATGACCACAATTCCTTCCAATTTCTGCGGCTCCAT...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTATGGAGCCGCAGAAATaGGAAGGAATTGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGMEPQK*EGIVVI
Trigger: GATGACCACAATTCCTTCCAATTTCTGCGGCTCCAT...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS TCA 90 bp TTCTCCATCTCTGGGGATTGGGACTTCTATGGAGTGTTTGTGAGTTaGATACAGCTTGCCATCATGCTGGCCATCAGGTCTGTAGAGTAC +
Preference number: 5 (lower is better)
Translates to: FSISGDWDFYGVFVS*IQLAIMLAIRSVEY
Trigger: GTACTCTACAGACCTGATGGCCAGCATGATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAGTCCCAATCCCCAGAGATGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS GCA 90 bp CAAACAAATGTGAGATCCAAGGCAGGATCAAAGGACGCAGCACACTaGATGGTGGCGTTTTCTCCAACTGTGATATCGGCATTAATTGGG +
Preference number: 5 (lower is better)
Translates to: QTNVRSKAGSKDAAH*MVAFSPTVISALIG
Trigger: CCCAATTAATGCCGATATCACAGTTGGAGAAAACGCCACCATGCAGTGTGCTGCGTCCTTTGATCCTGCCTTGGATCTCACATTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS GCA 90 bp TGGGGATTGGGACTTCTATGGAGTGTTTGTGAGTTGAATACAGCTTaGCATCATGCTGGCCATCAGGTCTGTAGAGTACCTTATATCCCG +
Preference number: 5 (lower is better)
Translates to: WGLGLLWSVCELNTA*HHAGHQVCRVPYIP
Trigger: CGGGATATAAGGTACTCTACAGACCTGATGGCCAGCATGATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAGTCCCAATCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CCA 90 bp AGGAGCCACATTTGGTGCAGCACCGTCTGTTTTAATTCTGTTAGATaGTATACTGGGCTCTCCTCTACCCAGTGTATTGGTTGCTACCAC +
Preference number: 5 (lower is better)
Translates to: RSHIWCSTVCFNSVR*YTGLSSTQCIGCYH
Trigger: GTGGTAGCAACCAATACACTGGGTAGAGGAGAGCCCAGTATACCATCTAACAGAATTAAAACAGACGGTGCTGCACCAAATGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CCA 90 bp GAACCTCCACAACGTATTCTCCATCTCTGGGGATTGGGACTTCTATaGAGTGTTTGTGAGTTGAATACAGCTTGCCATCATGCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: EPPQRILHLWGLGLL*SVCELNTACHHAGH
Trigger: ATGGCCAGCATGATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAGTCCCAATCCCCAGAGATGGAGAATACGTTGTGGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGCTCGTGCCCTACAGTaGAGTGAGACTTTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGARALQ*SETFPS
Trigger: GGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAGC...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGTGTTTGTCAGGGTTGTaGATAACAAGGTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLCLSGL*ITRFPP
Trigger: AGGAGGAAACCTTGTTATCAACAACCCTGACAAACA...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGCCAGCATCTTTCTGTTaGTCAGGGTTGTTGATAACA +
Preference number: 5 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLPASFC*SGLLIT
Trigger: TGTTATCAACAACCCTGACAAACAGAAAGATGCTGG...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGGATTCATTTCAAAAGTaGGAGCCAACGCCAAGATCT +
Preference number: 5 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLDSFQK*EPTPRS
Trigger: AGATCTTGGCGTTGGCTCCAACTTTTGAAATGAATC...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGGGTGCAGCTTTAGGTTaGCATTCAATTATCACCCTT +
Preference number: 5 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLGAALG*HSIITL
Trigger: AAGGGTGATAATTGAATGCAAACCTAAAGCTGCACC...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGAGTATTCTGCTGCTATaGACAAGCCACTCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLSILLL*TSHSVP
Trigger: AGGGACAGAGTGGCTTGTCAATAGCAGCAGAATACT...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTTAAGTCCACTGCTCTaGCTGCCTCCATATTTCCTT +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGLSPLL*LPPYFL
Trigger: AAGGAAATATGGAGGCAGCAAGAGCAGTGGACTTAA...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGTACCCAGTGTATTGGTaGCTACCACGCGGAATTCAT +
Preference number: 5 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLYPVYW*LPRGIH
Trigger: ATGAATTCCGCGTGGTAGCAACCAATACACTGGGTA...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGCCATCTCCTTTGTTGTaGAAGGCCTTGACTTTAACT +
Preference number: 5 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLPSPLL*KALTLT
Trigger: AGTTAAAGTCAAGGCCTTCAACAACAAAGGAGATGG...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGCCATCTCCTTTGTTGTaGAAGGCCTTGACTTTAACT +
Preference number: 5 (lower is better)
Translates to: AAEIGRNCGHPRVEGCLLPSPLL*KALTLT
Trigger: AGTTAAAGTCAAGGCCTTCAACAACAAAGGAGATGG...CAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCCTCAATCATGTCACTaGGAGGTCCACACCCTGCAC +
Preference number: 5 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSPQSCH*EVHTLH
Trigger: GTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGG...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGCTCCATCTCTGGGGATaGGGACTTCTATGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLLHLWG*GLLWSV
Trigger: AACACTCCATAGAAGTCCCAATCCCCAGAGATGGAG...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGCCTGTATATGGTGATTaGACTTTCACTCTACAGCCT +
Preference number: 5 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLPVYGD*TFTLQP
Trigger: AGGCTGTAGAGTGAAAGTCAAATCACCATATACAGG...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTATAGGATTATACCTCTaGAAGCATCCAACACTGCAC +
Preference number: 5 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGIGLYL*KHPTLH
Trigger: GTGCAGTGTTGGATGCTTCAAGAGGTATAATCCTAT...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTTCAACGATCACCAGGTaGGAGGCAGGCTTGCACAGA +
Preference number: 5 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSSTITR*EAGLHR
Trigger: TCTGTGCAAGCCTGCCTCCAACCTGGTGATCGTTGA...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS TCA 90 bp TTCTCCATTTGTAAACCGGGAAAGGGCTGGCTCGTGCCCTACAGTTaGGTGAGACTTTTCCTTCCAGTGATTCCTCTGGATAAATGGTAT +
Preference number: 5 (lower is better)
Translates to: FSICKPGKGWLVPYS*VRLFLPVIPLDKWY
Trigger: ATACCATTTATCCAGAGGAATCACTGGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAGCCAGCCCTTTCCCGGTTTACAAATGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000548005.5
ENST00000551295.7
ENST00000552248.5
CDS GCA 90 bp CAAGGTCAGCTGAAGCTGAAGAATTGTCCACAATTGTCTGGGCAGTaGATGTGTATCTTCCAGCATGTTTCAGCTGCGCATTTCGGATTA +
Preference number: 5 (lower is better)
Translates to: QGQLKLKNCPQLSGQ*MCIFQHVSAAHFGL
Trigger: TAATCCGAAATGCGCAGCTGAAACATGCTGGAAGATACACATGCACTGCCCAGACAATTGTGGACAATTCTTCAGCTTCAGCTGACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTGCTGCTCTTCAAAAATaGGTCCAAATCCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLAALQK*VQILCL
Trigger: AAGACAAAGGATTTGGACCAATTTTTGAAGAGCAGC...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTTTCTGTTTGTCAGGGTaGTTGATAACAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGFCLSG*LITRFP
Trigger: AGGAAACCTTGTTATCAACAACCCTGACAAACAGAA...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGTTCTGTTTGTCAGGGTaGTTGATAACAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: WLRMEPQKLEGIVVIPGLFCLSG*LITRFP
Trigger: AGGAAACCTTGTTATCAACAACCCTGACAAACAGAA...CAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTCAGGATATGGTTTTGTaGTTCGTTCAGGTATTGGAA +
Preference number: 5 (lower is better)
Translates to: RMEPQKLEGIVVIPGLKGQDMVL*FVQVLE
Trigger: TTCCAATACCTGAACGAACAACAAAACCATATCCTG...ACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGTCCACCTCTGTGTCATaGATGTGTTCTACCCACTCA +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQSTSVS*MCSTHS
Trigger: TGAGTGGGTAGAACACATCAATGACACAGAGGTGGA...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGTTGGGGGATCTGTCTTaGCATCTTTCCAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQLGDLS*HLSSHL
Trigger: CAGATGACTGGAAAGATGCAAAGACAGATCCCCCAA...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATCTGAAGGAGCCACATTaGGTGCAGCACCGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNLKEPH*VQHRLF
Trigger: AAACAGACGGTGCTGCACCAAATGTGGCTCCTTCAG...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTCCATCTCCTTTGTTGTaGAAGGCCTTGACTTTAACT +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGPSPLL*KALTLT
Trigger: AGTTAAAGTCAAGGCCTTCAACAACAAAGGAGATGG...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTTTTGCAGCTTCTTCTTaGTCATGGGCAGCCCAATAC +
Preference number: 5 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPFAASS*SWAAQY
Trigger: GTATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAA...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGTTTGCAGCTTCTTCTTaGTCATGGGCAGCCCAATAC +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQFAASS*SWAAQY
Trigger: GTATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAA...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGCTCTTGGCTGGTGACTaGAACTCTGTTTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQLLAGD*NSVCSF
Trigger: GAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAG...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGCTAGGAGGTGCTTTCTaGGTGAAAGCCTCAATCATG +
Preference number: 5 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLLGGAF*VKASIM
Trigger: CATGATTGAGGCTTTCACCAAGAAAGCACCTCCTAG...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGATTGGTCCAAATCCTTaGTCTTCCTCAGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWIGPNP*SSSETP
Trigger: TGGAGTTTCTGAGGAAGACAAAGGATTTGGACCAAT...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGCCTGTATATGGTGATTaGACTTTCACTCTACAGCCT +
Preference number: 5 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWPVYGD*TFTLQP
Trigger: AGGCTGTAGAGTGAAAGTCAAATCACCATATACAGG...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTaGCATACTCTTCAAAGTACC +
Preference number: 5 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPPGLPV*HTLQST
Trigger: GGTACTTTGAAGAGTATGCAAAACTGGAAGGCCAGG...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATCCAAAGCACCAACACTaGGGAGACACCATCGGAAAG +
Preference number: 5 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNPKHQH*GDTIGK
Trigger: CTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTATGATCTTAAGACTGTaGACATACTTCCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: GAAEIGRNCGHPRVEGCLMILRL*TYFHWE
Trigger: TTCCCAGTGGAAGTATGTCAACAGTCTTAAGATCAT...AAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GAAATTGGAAGGAATTGTGGTCATCCCAGGGTTGAAGGGTGTCTTCTGAGCTGGAGCAACAGAGAATATTaGGGCTCAAGACATGGTTCT +
Preference number: 5 (lower is better)
Translates to: EIGRNCGHPRVEGCLLSWSNREY*GSRHGS
Trigger: AGAACCATGTCTTGAGCCCAAATATTCTCTGTTGCT...CCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCTTCCAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548481.1
CDS TCA 90 bp CACAAGGCCAGTAGAGATCACTGCCTATGTCCACCTCTGTGTCATTaGTGTGTTCTACCCACTCAGGGAATGCTTGAACATAAATTCTTG +
Preference number: 5 (lower is better)
Translates to: HKASRDHCLCPPLCH*CVLPTQGMLEHKFL
Trigger: CAAGAATTTATGTTCAAGCATTCCCTGAGTGGGTAGAACACATCAATGACACAGAGGTGGACATAGGCAGTGATCTCTACTGGCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS CCA 90 bp ACACTGCATGGTGGCGTTTTCTCCAACTGTGATATCGGCATTAATTaGGGCCAATATAATTCGCGTAGGATCTGTGATAACAAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: TLHGGVFSNCDIGIN*GQYNSRRICDNKGS
Trigger: GGAACCCTTGTTATCACAGATCCTACGCGAATTATATTGGCCCCAATTAATGCCGATATCACAGTTGGAGAAAACGCCACCATGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGCGGAAGCCTCAACATTaGCAATGTAGAGATTGCCAT +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQRKPQH*QCRDCH
Trigger: ATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCG...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGCAGCAGGATATGGTTTaGTTGTTCGTTCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLQQDMV*LFVQVL
Trigger: CAATACCTGAACGAACAACAAAACCATATCCTGCTG...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AAACCCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCACCTCTGTGTCATaGATGTGTTCTACCCACTCA +
Preference number: 5 (lower is better)
Translates to: KPKAPTLGRHHRKDILFASTSVS*MCSTHS
Trigger: TGAGTGGGTAGAACACATCAATGACACAGAGGTGGA...GGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTCCACCTCTGTGTCATaGATGTGTTCTACCCACTCA +
Preference number: 5 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQSTSVS*MCSTHS
Trigger: TGAGTGGGTAGAACACATCAATGACACAGAGGTGGA...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTCCACCTCTGTGTCATaGATGTGTTCTACCCACTCA +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVSTSVS*MCSTHS
Trigger: TGAGTGGGTAGAACACATCAATGACACAGAGGTGGA...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGAGTATTCTGCTGCTATaGACAAGCCACTCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQSILLL*TSHSVP
Trigger: AGGGACAGAGTGGCTTGTCAATAGCAGCAGAATACT...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGTTAAGTCCACTGCTCTaGCTGCCTCCATATTTCCTT +
Preference number: 5 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLLSPLL*LPPYFL
Trigger: AAGGAAATATGGAGGCAGCAAGAGCAGTGGACTTAA...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACCTCAATCATGTCACTaGGAGGTCCACACCCTGCAC +
Preference number: 5 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSPQSCH*EVHTLH
Trigger: GTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCACTAGGAGGTGCTTTCTaGGTGAAAGCCTCAATCATG +
Preference number: 5 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSLGGAF*VKASIM
Trigger: CATGATTGAGGCTTTCACCAAGAAAGCACCTCCTAG...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGCTCCATCTCTGGGGATaGGGACTTCTATGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLLHLWG*GLLWSV
Trigger: AACACTCCATAGAAGTCCCAATCCCCAGAGATGGAG...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CAA 90 bp GGAGACACCATCGGAAAGACATATTATTTGCCTCCTCCTGGCCTTCCAGTTTTGATAGGATTATACCTCTaGAAGCATCCAACACTGCAC +
Preference number: 5 (lower is better)
Translates to: GDTIGKTYYLPPPGLPVLIGLYL*KHPTLH
Trigger: GTGCAGTGTTGGATGCTTCAAGAGGTATAATCCTAT...CAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGATTGGTCCAAATCCTTaGTCTTCCTCAGAAACTGCT +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQIGPNP*SSSETA
Trigger: AGCAGTTTCTGAGGAAGACAAAGGATTTGGACCAAT...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348761.2
CDS-3UTR CAA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTTGTTTGTCAGGGTTGTaGATAACAAGGTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPCLSGL*ITRFPP
Trigger: AGGAGGAAACCTTGTTATCAACAACCCTGACAAACA...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTTGTAGAGATTGCCATTaGTCTGAGACACAAATCGCC +
Preference number: 5 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVCRDCH*SETQIA
Trigger: GGCGATTTGTGTCTCAGACAAATGGCAATCTCTACA...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCTGTAGAGATTGCCATTaGTCTGAGACACAAATCGCC +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVCRDCH*SETQIA
Trigger: GGCGATTTGTGTCTCAGACAAATGGCAATCTCTACA...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGATGTAGAGATTGCCATTaGTCTGAGACACAAATCGCC +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGCRDCH*SETQIA
Trigger: GGCGATTTGTGTCTCAGACAAATGGCAATCTCTACA...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCATGTAGAGATTGCCATTaGTCTGAGACACAAATCGCC +
Preference number: 5 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPCRDCH*SETQIA
Trigger: GGCGATTTGTGTCTCAGACAAATGGCAATCTCTACA...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGACGGAAGCCTCAACATTaGCAATGTAGAGATTGCCAT +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGRKPQH*QCRDCH
Trigger: ATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCG...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCGGAAGCCTCAACATTaGCAATGTAGAGATTGCCAT +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVRKPQH*QCRDCH
Trigger: ATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTCAGCAGGATATGGTTTaGTTGTTCGTTCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPQQDMV*LFVQVL
Trigger: CAATACCTGAACGAACAACAAAACCATATCCTGCTG...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGCCACTCAGGGAATGCTaGAACATAAATTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQPLREC*NINSCL
Trigger: CAAGCAAGAATTTATGTTCAAGCATTCCCTGAGTGG...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGGATTCATTTCAAAAGTaGGAGCCAACGCCAAGATCT +
Preference number: 5 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLDSFQK*EPTPRS
Trigger: AGATCTTGGCGTTGGCTCCAACTTTTGAAATGAATC...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTGCAGCTTTAGGTTaGCATTCAATTATCACCCTT +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQGAALG*HSIITL
Trigger: AAGGGTGATAATTGAATGCAAACCTAAAGCTGCACC...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTAGTATTCTGCTGCTATaGACAAGCCACTCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSSILLL*TSHSVP
Trigger: AGGGACAGAGTGGCTTGTCAATAGCAGCAGAATACT...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGAAGAATTGTCCACAATaGTCTGGGCAGTGCATGTGT +
Preference number: 5 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQKNCPQ*SGQCMC
Trigger: ACACATGCACTGCCCAGACAATTGTGGACAATTCTT...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAAAGAATTGTCCACAATaGTCTGGGCAGTGCATGTGT +
Preference number: 5 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSKNCPQ*SGQCMC
Trigger: ACACATGCACTGCCCAGACAATTGTGGACAATTCTT...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCTTGGGGGATCTGTCTTaGCATCTTTCCAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSLGDLS*HLSSHL
Trigger: CAGATGACTGGAAAGATGCAAAGACAGATCCCCCAA...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp ATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATTACCCAGTGTATTGGTaGCTACCACGCGGAATTCAT +
Preference number: 5 (lower is better)
Translates to: MKGFPNASVIMCVVNQLNYPVYW*LPRGIH
Trigger: ATGAATTCCGCGTGGTAGCAACCAATACACTGGGTA...ATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACTGAAGGAGCCACATTaGGTGCAGCACCGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSLKEPH*VQHRLF
Trigger: AAACAGACGGTGCTGCACCAAATGTGGCTCCTTCAG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTCATAGTGGTATTCTCTaGACAAAGGCGCCCATGTTA +
Preference number: 5 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVHSGIL*TKAPML
Trigger: TAACATGGGCGCCTTTGTCAAGAGAATACCACTATG...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCACATAGTGGTATTCTCTaGACAAAGGCGCCCATGTTA +
Preference number: 5 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPHSGIL*TKAPML
Trigger: TAACATGGGCGCCTTTGTCAAGAGAATACCACTATG...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGGTCCATCTCCTTTGTaGTTGAAGGCCTTGACTTTA +
Preference number: 5 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVGPSPL*LKALTL
Trigger: TAAAGTCAAGGCCTTCAACAACAAAGGAGATGGACC...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTTTGTTAAAGTATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGTAAGCCGAGAAGACTaGGGGATAGGGTGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: SLLKYNLFGLGWSRRNWKVSRED*GIGWVH
Trigger: GTGCACCCACCCTATCCCCAAGTCTTCTCGGCTTAC...CTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CAA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGGGAAAGACATATTATTaGCCTCCTCCTGGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLGKTYY*PPPGLP
Trigger: TGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCC...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGGGTAAGGCAAGCATGCATTaGGCAAAAGATTTAGTTGTT +
Preference number: 5 (lower is better)
Translates to: FGLGWSRRNWKELWSSQGKASMH*AKDLVV
Trigger: AACAACTAAATCTTTTGCCAAATGCATGCTTGCCTT...ACCCTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS TCA 90 bp AGTCTTGGTCTGGATAGTGTATTTAGAAATAGGACTATGATTGTCTaGACCACGGCTCCAAGTAAGTGCCACAGAAGTGGCTCTAATGTC +
Preference number: 5 (lower is better)
Translates to: SLGLDSVFRNRTMIV*TTAPSKCHRSGSNV
Trigger: GACATTAGAGCCACTTCTGTGGCACTTACTTGGAGCCGTGGTTCAGACAATCATAGTCCTATTTCTAAATACACTATCCAGACCAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTTGTTTGTCAGGGTTGTaGATAACAAGGTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LDEGVPECLSHHVCCKSVCLSGL*ITRFPP
Trigger: AGGAGGAAACCTTGTTATCAACAACCCTGACAAACA...AACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGACCAGCATCTTTCTGTTaGTCAGGGTTGTTGATAACA +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGPASFC*SGLLIT
Trigger: TGTTATCAACAACCCTGACAAACAGAAAGATGCTGG...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGATGAGTGGGATGAATTaGCTGAACACGCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: FWMKGFPNASVIMCVVNQMSGMN*LNTLFV
Trigger: TACAAAGAGCGTGTTCAGCAAATTCATCCCACTCAT...CTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAATGAGTGGGATGAATTaGCTGAACACGCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSMSGMN*LNTLFV
Trigger: TACAAAGAGCGTGTTCAGCAAATTCATCCCACTCAT...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAATGAGTGGGATGAATTaGCTGAACACGCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGMSGMN*LNTLFV
Trigger: TACAAAGAGCGTGTTCAGCAAATTCATCCCACTCAT...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAGCAGGATATGGTTTTGTaGTTCGTTCAGGTATTGGAA +
Preference number: 5 (lower is better)
Translates to: LFGLGWSRRNWKELWSSQQDMVL*FVQVLE
Trigger: TTCCAATACCTGAACGAACAACAAAACCATATCCTG...CTGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGACAGCAGGATATGGTTTaGTTGTTCGTTCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGQQDMV*LFVQVL
Trigger: CAATACCTGAACGAACAACAAAACCATATCCTGCTG...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCAGCAGGATATGGTTTaGTTGTTCGTTCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVQQDMV*LFVQVL
Trigger: CAATACCTGAACGAACAACAAAACCATATCCTGCTG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AAACCCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCCCACTCAGGGAATGCTaGAACATAAATTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: KPKAPTLGRHHRKDILFAPLREC*NINSCL
Trigger: CAAGCAAGAATTTATGTTCAAGCATTCCCTGAGTGG...GGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCCACTCAGGGAATGCTaGAACATAAATTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVPLREC*NINSCL
Trigger: CAAGCAAGAATTTATGTTCAAGCATTCCCTGAGTGG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCGGTGCAGCTTTAGGTTaGCATTCAATTATCACCCTT +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVGAALG*HSIITL
Trigger: AAGGGTGATAATTGAATGCAAACCTAAAGCTGCACC...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCAAGAATTGTCCACAATaGTCTGGGCAGTGCATGTGT +
Preference number: 5 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSKNCPQ*SGQCMC
Trigger: ACACATGCACTGCCCAGACAATTGTGGACAATTCTT...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTAAGAATTGTCCACAATaGTCTGGGCAGTGCATGTGT +
Preference number: 5 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSKNCPQ*SGQCMC
Trigger: ACACATGCACTGCCCAGACAATTGTGGACAATTCTT...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGCATAGTGGTATTCTCTaGACAAAGGCGCCCATGTTA +
Preference number: 5 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLHSGIL*TKAPML
Trigger: TAACATGGGCGCCTTTGTCAAGAGAATACCACTATG...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGGGTCCATCTCCTTTGTaGTTGAAGGCCTTGACTTTA +
Preference number: 5 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLGPSPL*LKALTL
Trigger: TAAAGTCAAGGCCTTCAACAACAAAGGAGATGGACC...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTCCTCAATCATGTCACTaGGAGGTCCACACCCTGCAC +
Preference number: 5 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFPQSCH*EVHTLH
Trigger: GTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGG...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACTCCATCTCTGGGGATaGGGACTTCTATGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSLHLWG*GLLWSV
Trigger: AACACTCCATAGAAGTCCCAATCCCCAGAGATGGAG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000548481.1
ENST00000551295.7
CDS-3UTR CAA 90 bp CTTTTGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAATTGGTCCAAATCCTTaGTCTTCCTCAGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: LLDEGVPECLSHHVCCKSIGPNP*SSSETP
Trigger: TGGAGTTTCTGAGGAAGACAAAGGATTTGGACCAAT...TGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAATTGGTCCAAATCCTTaGTCTTCCTCAGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGIGPNP*SSSETP
Trigger: TGGAGTTTCTGAGGAAGACAAAGGATTTGGACCAAT...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTCAACGATCACCAGGTaGGAGGCAGGCTTGCACAGA +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLSTITR*EAGLHR
Trigger: TCTGTGCAAGCCTGCCTCCAACCTGGTGATCGTTGA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS GCA 90 bp GGAAACAAAGCAGGAATAATTGCCTTTGTCGGAAGCCTCAACATTTaGAATGTAGAGATTGCCATTTGTCTGAGACACAAATCGCCGTTT +
Preference number: 5 (lower is better)
Translates to: GNKAGIIAFVGSLNI*NVEIAICLRHKSPF
Trigger: AAACGGCGATTTGTGTCTCAGACAAATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCGACAAAGGCAATTATTCCTGCTTTGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCGCTGCTCTTCAAAAATaGGTCCAAATCCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVAALQK*VQILCL
Trigger: AAGACAAAGGATTTGGACCAATTTTTGAAGAGCAGC...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAGCTCGTGCCCTACAGTaGAGTGAGACTTTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEARALQ*SETFPS
Trigger: GGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAGC...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCCAGCATCTTTCTGTTaGTCAGGGTTGTTGATAACA +
Preference number: 5 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSPASFC*SGLLIT
Trigger: TGTTATCAACAACCCTGACAAACAGAAAGATGCTGG...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCAGCATCTTTCTGTTaGTCAGGGTTGTTGATAACA +
Preference number: 5 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSPASFC*SGLLIT
Trigger: TGTTATCAACAACCCTGACAAACAGAAAGATGCTGG...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGACAGGATATGGTTTTGTaGTTCGTTCAGGTATTGGAA +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGQDMVL*FVQVLE
Trigger: TTCCAATACCTGAACGAACAACAAAACCATATCCTG...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCCAGGATATGGTTTTGTaGTTCGTTCAGGTATTGGAA +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVQDMVL*FVQVLE
Trigger: TTCCAATACCTGAACGAACAACAAAACCATATCCTG...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACTAGGAGGTGCTTTCTaGGTGAAAGCCTCAATCATG +
Preference number: 5 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSLGGAF*VKASIM
Trigger: CATGATTGAGGCTTTCACCAAGAAAGCACCTCCTAG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAAAGCACCAACACTTGGGAGACACCATCGGAAAGACATATTATTTGCCTCCTTTAGCTCTATGGCAGTaGGATAATTTTAAACACCTG +
Preference number: 5 (lower is better)
Translates to: PKHQHLGDTIGKTYYLPPLALWQ*DNFKHL
Trigger: CAGGTGTTTAAAATTATCCAACTGCCATAGAGCTAA...AGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TGGATGAAGGGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAAGGCAAGCATGCATTaGGCAAAAGATTTAGTTGTT +
Preference number: 5 (lower is better)
Translates to: WMKGFPNASVIMCVVNQLKASMH*AKDLVV
Trigger: AACAACTAAATCTTTTGCCAAATGCATGCTTGCCTT...CAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTGCTGCTCTTCAAAAATaGGTCCAAATCCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSAALQK*VQILCL
Trigger: AAGACAAAGGATTTGGACCAATTTTTGAAGAGCAGC...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TATAATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCACGGAAGCCTCAACATTaGCAATGTAGAGATTGCCAT +
Preference number: 5 (lower is better)
Translates to: YNLFGLGWSRRNWKELWSRKPQH*QCRDCH
Trigger: ATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCG...TGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp CCAGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGATCATTCCTTGTAATGTaGTTGATTTCCAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: PVKITTFHPNDLQKLMAGSFLVM*LISKLP
Trigger: TGGTAGCTTGGAAATCAACAACATTACAAGGAATGA...TCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTATTGGGGGATCTGTCTTaGCATCTTTCCAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLLGDLS*HLSSHL
Trigger: CAGATGACTGGAAAGATGCAAAGACAGATCCCCCAA...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AAATGTGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTGGATGGAGCCGCAGAAATaGGAAGGAATTGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: KCASSFSQLIKTQSTNTWMEPQK*EGIVVI
Trigger: GATGACCACAATTCCTTCCAATTTCTGCGGCTCCAT...CCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCCAATTGAACACTGTAACTaGTCCCATTGGGTTAAATCA +
Preference number: 5 (lower is better)
Translates to: FIWLRMEPQKLEGIVVIPIEHCN*SHWVKS
Trigger: TGATTTAACCCAATGGGACAAGTTACAGTGTTCAAT...TGGGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GGGTTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGATGATCTTAAGACTGTaGACATACTTCCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: GFPNASVIMCVVNQLNSLMILRL*TYFHWE
Trigger: TTCCCAGTGGAAGTATGTCAACAGTCTTAAGATCAT...CAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp GTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCGTCTCATTAGAGAGTTaGACAACATTGTTCATTACC +
Preference number: 5 (lower is better)
Translates to: VKITTFHPNDLQKLMAGVVSLES*TTLFIT
Trigger: GGTAATGAACAATGTTGTCAAACTCTCTAATGAGAC...GACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAATGTAGAGATTGCCATTaGTCTGAGACACAAATCGCC +
Preference number: 5 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQCRDCH*SETQIA
Trigger: GGCGATTTGTGTCTCAGACAAATGGCAATCTCTACA...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTCCACCTCTGTGTCATaGATGTGTTCTACCCACTCA +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLSTSVS*MCSTHS
Trigger: TGAGTGGGTAGAACACATCAATGACACAGAGGTGGA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGAGTATTCTGCTGCTATaGACAAGCCACTCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLSILLL*TSHSVP
Trigger: AGGGACAGAGTGGCTTGTCAATAGCAGCAGAATACT...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AATTTATTTGGCTTAGGATGGAGCCGCAGAAATTGGAAGGAATTGTGGTCATCCTCATTCCTTGTAATGTaGTTGATTTCCAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: NLFGLGWSRRNWKELWSSSFLVM*LISKLP
Trigger: TGGTAGCTTGGAAATCAACAACATTACAAGGAATGA...GGATGACCACAATTCCTTCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAAAAATCACAACCTTCCACCCAAACGATCTACAAAAGCTGATGGCAGGAGTTCATTCCTTGTAATGTaGTTGATTTCCAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: SKNHNLPPKRSTKADGRSSFLVM*LISKLP
Trigger: TGGTAGCTTGGAAATCAACAACATTACAAGGAATGA...ACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTGGAAGGTTGTGATTTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTATGGAGCCGCAGAAATaGGAAGGAATTGTGGTCATC +
Preference number: 5 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFMEPQK*EGIVVI
Trigger: GATGACCACAATTCCTTCCAATTTCTGCGGCTCCAT...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS TCA 90 bp TCTAAGGTCACATTTTGGCCCATCAATGCATATACATCCTTGAACTaGACTACAATATCAGCAGGATATGGTTTTGTTGTTCGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SKVTFWPINAYTSLN*TTISAGYGFVVRSG
Trigger: ACCTGAACGAACAACAAAACCATATCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATATGCATTGATGGGCCAAAATGTGACCTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTACAGCAGGATATGGTTTaGTTGTTCGTTCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLQQDMV*LFVQVL
Trigger: CAATACCTGAACGAACAACAAAACCATATCCTGCTG...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAGGTGCAGCTTTAGGTTaGCATTCAATTATCACCCTT +
Preference number: 5 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLGAALG*HSIITL
Trigger: AAGGGTGATAATTGAATGCAAACCTAAAGCTGCACC...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGAAGAATTGTCCACAATaGTCTGGGCAGTGCATGTGT +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLKNCPQ*SGQCMC
Trigger: ACACATGCACTGCCCAGACAATTGTGGACAATTCTT...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TCAAAACTAAACAACCTCCAAAGTCTGTTTTCCTCTTACCTTTCAGAACCATTTGGTCCATCTCCTTTGTaGTTGAAGGCCTTGACTTTA +
Preference number: 5 (lower is better)
Translates to: SKLNNLQSLFSSYLSEPFGPSPL*LKALTL
Trigger: TAAAGTCAAGGCCTTCAACAACAAAGGAGATGGACC...AAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGAGGTTGTTTAGTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTATGGAGTGTTTGTGAGTaGAATACAGCTTGCCATCAT +
Preference number: 5 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLWSVCE*NTACHH
Trigger: ATGATGGCAAGCTGTATTCAACTCACAAACACTCCA...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp AAATGTGCATCTTCCTTTTCACAACTTATAAAAACCCAAAGCACCAACACTTGGTGGAGTGTTTGTGAGTaGAATACAGCTTGCCATCAT +
Preference number: 5 (lower is better)
Translates to: KCASSFSQLIKTQSTNTWWSVCE*NTACHH
Trigger: ATGATGGCAAGCTGTATTCAACTCACAAACACTCCA...CCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS TCA 90 bp TCCTTCAATAATTGGGGGATCTGTCTTTGCATCTTTCCAGTCATCTaGAAGAATAGTCTTGGTCTGGATAGTGTATTTAGAAATAGGACT +
Preference number: 5 (lower is better)
Translates to: SFNNWGICLCIFPVI*KNSLGLDSVFRNRT
Trigger: AGTCCTATTTCTAAATACACTATCCAGACCAAGACTATTCTTTCAGATGACTGGAAAGATGCAAAGACAGATCCCCCAATTATTGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS TCA 90 bp CTTATCTGTCGTCCTGGGTATAATATCTATTGCAAATTGTCCATTTaGATAAATACAGCAACAGTTATACCACAATACGCCTCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LICRPGYNIYCKLSI*INTATVIPQYASLL
Trigger: CAGGAGAGAGGCGTATTGTGGTATAACTGTTGCTGTATTTATTCAAATGGACAATTTGCAATAGATATTATACCCAGGACGACAGATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547849.5
ENST00000552913.5
CDS-3UTR CAA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAAGCTGCTCTTCAAAAATaGGTCCAAATCCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQAALQK*VQILCL
Trigger: AAGACAAAGGATTTGGACCAATTTTTGAAGAGCAGC...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTGTTTGTCAGGGTTGTaGATAACAAGGTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLCLSGL*ITRFPP
Trigger: AGGAGGAAACCTTGTTATCAACAACCCTGACAAACA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAATGTTTGTCAGGGTTGTaGATAACAAGGTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYECLSGL*ITRFPP
Trigger: AGGAGGAAACCTTGTTATCAACAACCCTGACAAACA...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAATTCTGTTTGTCAGGGTaGTTGATAACAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQFCLSG*LITRFP
Trigger: AGGAAACCTTGTTATCAACAACCCTGACAAACAGAA...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAATGAGTGGGATGAATTaGCTGAACACGCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEMSGMN*LNTLFV
Trigger: TACAAAGAGCGTGTTCAGCAAATTCATCCCACTCAT...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGCCACTCAGGGAATGCTaGAACATAAATTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLPLREC*NINSCL
Trigger: CAAGCAAGAATTTATGTTCAAGCATTCCCTGAGTGG...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGGATTCATTTCAAAAGTaGGAGCCAACGCCAAGATCT +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLDSFQK*EPTPRS
Trigger: AGATCTTGGCGTTGGCTCCAACTTTTGAAATGAATC...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAGATTCATTTCAAAAGTaGGAGCCAACGCCAAGATCT +
Preference number: 5 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEDSFQK*EPTPRS
Trigger: AGATCTTGGCGTTGGCTCCAACTTTTGAAATGAATC...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAAGGTGCAGCTTTAGGTTaGCATTCAATTATCACCCTT +
Preference number: 5 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEGAALG*HSIITL
Trigger: AAGGGTGATAATTGAATGCAAACCTAAAGCTGCACC...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAATCATTCCTTGTAATGTaGTTGATTTCCAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: SFTSTLKHISMHTMENEESFLVM*LISKLP
Trigger: TGGTAGCTTGGAAATCAACAACATTACAAGGAATGA...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGATTGGTCCAAATCCTTaGTCTTCCTCAGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLIGPNP*SSSETP
Trigger: TGGAGTTTCTGAGGAAGACAAAGGATTTGGACCAAT...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TCTTTTACATCCACACTCAAACACATTTCCATGCACACCATGGAGAATGAAGAAGAGAAAATGAAAAGCTaGAGTTATCAGTGTACGAGA +
Preference number: 5 (lower is better)
Translates to: SFTSTLKHISMHTMENEEEKMKS*SYQCTR
Trigger: TCTCGTACACTGATAACTCAAGCTTTTCATTTTCTC...TTCTTCATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS TCA 90 bp AACATTCTAAGGTCACATTTTGGCCCATCAATGCATATACATCCTTaGACTGAACTACAATATCAGCAGGATATGGTTTTGTTGTTCGTT +
Preference number: 5 (lower is better)
Translates to: NILRSHFGPSMHIHP*TELQYQQDMVLLFV
Trigger: AACGAACAACAAAACCATATCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATATGCATTGATGGGCCAAAATGTGACCTTAGAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTTCTGTTTGTCAGGGTaGTTGATAACAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLFCLSG*LITRFP
Trigger: AGGAAACCTTGTTATCAACAACCCTGACAAACAGAA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAATTCTGTTTGTCAGGGTaGTTGATAACAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEFCLSG*LITRFP
Trigger: AGGAAACCTTGTTATCAACAACCCTGACAAACAGAA...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS-3UTR CAA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTATCATTCCTTGTAATGTaGTTGATTTCCAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLSFLVM*LISKLP
Trigger: TGGTAGCTTGGAAATCAACAACATTACAAGGAATGA...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS-3UTR CAA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTATTAGCTCTATGGCAGTaGGATAATTTTAAACACCTG +
Preference number: 5 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLLALWQ*DNFKHL
Trigger: CAGGTGTTTAAAATTATCCAACTGCCATAGAGCTAA...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp TTCCCGAATGCCTCAGTCATCATGTGTGTTGTAAATCAGTTGAATAGTTTGTTAATTGAACACTGTAACTaGTCCCATTGGGTTAAATCA +
Preference number: 5 (lower is better)
Translates to: FPNASVIMCVVNQLNSLLIEHCN*SHWVKS
Trigger: TGATTTAACCCAATGGGACAAGTTACAGTGTTCAAT...TAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp AAAACTCAAGATGTCATGAATGATAGGGGCCATTCAATAATATGCAGTACCCAAGAGAAAATGAAAAGCTaGAGTTATCAGTGTACGAGA +
Preference number: 5 (lower is better)
Translates to: KTQDVMNDRGHSIICSTQEKMKS*SYQCTR
Trigger: TCTCGTACACTGATAACTCAAGCTTTTCATTTTCTC...TTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000347616.5
ENST00000551295.7
CDS-3UTR CAA 90 bp CACCCAAACGATCTACAAAAGCTGATGGCAGGAGTCAATAAAATTAAATATGAATTCCAATTCCAGGAATaGTTCCAAAAACCCTACAGA +
Preference number: 5 (lower is better)
Translates to: HPNDLQKLMAGVNKIKYEFQFQE*FQKPYR
Trigger: TCTGTAGGGTTTTTGGAACAATTCCTGGAATTGGAA...TTCATATTTAATTTTATTGACTCCTGCCATCAGCTTTTGTAGATCGTTTGGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS TCA 90 bp TCCTCAGAAACTGCTAAACAGGTAGTAATAGATATTATCACAAGATaGCTGACCAGCAACCACATTTTCATCTTGTATTCAGTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: SSETAKQVVIDIITR*LTSNHIFILYSVEV
Trigger: AACTTCTACTGAATACAAGATGAAAATGTGGTTGCTGGTCAGTCATCTTGTGATAATATCTATTACTACCTGTTTAGCAGTTTCTGAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348761.2
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGTTAGCTCTATGGCAGTaGGATAATTTTAAACACCTG +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLLALWQ*DNFKHL
Trigger: CAGGTGTTTAAAATTATCCAACTGCCATAGAGCTAA...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547702.5
CDS-3UTR CAA 90 bp AGTAATGCCCCTTTTAGCTTATGTCCTAATTATGATGTCTCATTAGAGAGTTTGGAGAGTTTGACAACATaGTTCATTACCTGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SNAPFSLCPNYDVSLESLESLTT*FITCLN
Trigger: ATTCAAGCAGGTAATGAACAATGTTGTCAAACTCTC...CAAACTCTCTAATGAGACATCATAATTAGGACATAAGCTAAAAGGGGCATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS TCA 72 bp GAAGTCAGGAGATCGAGACCATCTTGGCTAACACGGTaGAACCCCGTCTCTACTGTTCCCTGCTCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSTVPCSCS
Trigger: CGAGCAGGAGCAGGGAACAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551424.5
CDS CCA 72 bp AGGTGCTTTCTTGGTGAAAGCCTCAATCATGTCACTTaGAGGTCCACACCCTGCACTATTGCAGGCCCCGAC +
Preference number: 6 (lower is better)
Translates to: RCFLGESLNHVT*RSTPCTIAGPD
Trigger: GTCGGGGCCTGCAATAGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGGCTTTCACCAAGAAAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS GCA 72 bp GTGAGATCCAAGGCAGGATCAAAGGACGCAGCACACTaGATGGTGGCGTTTTCTCCAACTGTGATATCGGCA +
Preference number: 6 (lower is better)
Translates to: VRSKAGSKDAAH*MVAFSPTVISA
Trigger: TGCCGATATCACAGTTGGAGAAAACGCCACCATGCAGTGTGCTGCGTCCTTTGATCCTGCCTTGGATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS GCA 72 bp GGCCGAGTACTCTTGGCTGGTGACTTGAACTCTGTTTaGAGCTTCTTCTTTGTCATGGGCAGCCCAATACCG +
Preference number: 6 (lower is better)
Translates to: GRVLLAGDLNSV*SFFFVMGSPIP
Trigger: CGGTATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS CAA 90 bp GGGCCTGGAGGGCCTCTCACTACAAGGTCAGCTGAAGCTGAAGAATaGTCCACAATTGTCTGGGCAGTGCATGTGTATCTTCCAGCATGT +
Preference number: 6 (lower is better)
Translates to: GPGGPLTTRSAEAEE*STIVWAVHVYLPAC
Trigger: ACATGCTGGAAGATACACATGCACTGCCCAGACAATTGTGGACAATTCTTCAGCTTCAGCTGACCTTGTAGTGAGAGGCCCTCCAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CAA 90 bp TGGCAGAAGGTTCTCGAGCCTGGCCGAGTACTCTTGGCTGGTGACTaGAACTCTGTTTGCAGCTTCTTCTTTGTCATGGGCAGCCCAATA +
Preference number: 6 (lower is better)
Translates to: WQKVLEPGRVLLAGD*NSVCSFFFVMGSPI
Trigger: TATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS TCA 72 bp TTCTCGAGCCTGGCCGAGTACTCTTGGCTGGTGACTTaGACTCTGTTTGCAGCTTCTTCTTTGTCATGGGCA +
Preference number: 6 (lower is better)
Translates to: FSSLAEYSWLVT*TLFAASSLSWA
Trigger: TGCCCATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGGCTCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS GCA 72 bp TTTTGCGGGCTGTACAAGAAGCCTGGCACTAGCGTTTaGTTCTGGTCAGGGCCTCAGGAGACCTTTAATCAT +
Preference number: 6 (lower is better)
Translates to: FCGLYKKPGTSV*FWSGPQETFNH
Trigger: ATGATTAAAGGTCTCCTGAGGCCCTGACCAGAAGCAAACGCTAGTGCCAGGCTTCTTGTACAGCCCGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548005.5
CDS CCA 72 bp TGTGCGCGCGAACCTCCACAACGTATTCTCCATCTCTaGGGATTGGGACTTCTATGGAGTGTTTGTGAGTTG +
Preference number: 6 (lower is better)
Translates to: CAREPPQRILHL*GLGLLWSVCEL
Trigger: CAACTCACAAACACTCCATAGAAGTCCCAATCCCCAGAGATGGAGAATACGTTGTGGAGGTTCGCGCGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CCA 72 bp TTTCACAGAAATGGTGAGTGTCAACGATCACCAGGTTaGAGGCAGGCTTGCACAGACGGGGAGAAAGGAATC +
Preference number: 6 (lower is better)
Translates to: FHRNGECQRSPG*RQACTDGEKGI
Trigger: GATTCCTTTCTCCCCGTCTGTGCAAGCCTGCCTCCAACCTGGTGATCGTTGACACTCACCATTTCTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS CAA 90 bp CACTGTGCGCGCGAACCTCCACAACGTATTCTCCATCTCTGGGGATaGGGACTTCTATGGAGTGTTTGTGAGTTGAATACAGCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: HCAREPPQRILHLWG*GLLWSVCELNTACH
Trigger: ATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAGTCCCAATCCCCAGAGATGGAGAATACGTTGTGGAGGTTCGCGCGCACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS TCA 72 bp GAAGGTTCTCGAGCCTGGCCGAGTACTCTTGGCTGGTaGCTTGAACTCTGTTTGCAGCTTCTTCTTTGTCAT +
Preference number: 6 (lower is better)
Translates to: EGSRAWPSTLGW*LELCLQLLLCH
Trigger: ATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS GCA 72 bp TGGTATACTGGGCTCTCCTCTACCCAGTGTATTGGTTaGTACCACGCGGAATTCATACTCCATCCATGGGAT +
Preference number: 6 (lower is better)
Translates to: WYTGLSSTQCIG*YHAEFILHPWD
Trigger: ATCCCATGGATGGAGTATGAATTCCGCGTGGTAGCAACCAATACACTGGGTAGAGGAGAGCCCAGTATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CAA 72 bp ATGGTATACTGGGCTCTCCTCTACCCAGTGTATTGGTaGCTACCACGCGGAATTCATACTCCATCCATGGGA +
Preference number: 6 (lower is better)
Translates to: MVYWALLYPVYW*LPRGIHTPSMG
Trigger: TCCCATGGATGGAGTATGAATTCCGCGTGGTAGCAACCAATACACTGGGTAGAGGAGAGCCCAGTATACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS TCA 72 bp CACAGAGAAGCACCATTCCTTTCCCTTCTTTTACTCTaGCCTCAGGACGTTCCTCAGGTGGGAAAGGATCAA +
Preference number: 6 (lower is better)
Translates to: HREAPFLSLLLL*PQDVPQVGKDQ
Trigger: TTGATCCTTTCCCACCTGAGGAACGTCCTGAGGTCAGAGTAAAAGAAGGGAAAGGAATGGTGCTTCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS TCA 72 bp TCTGGGGATTGGGACTTCTATGGAGTGTTTGTGAGTTaGATACAGCTTGCCATCATGCTGGCCATCAGGTCT +
Preference number: 6 (lower is better)
Translates to: SGDWDFYGVFVS*IQLAIMLAIRS
Trigger: AGACCTGATGGCCAGCATGATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAGTCCCAATCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS TCA 72 bp CCATCTCTGGGGATTGGGACTTCTATGGAGTGTTTGTaGGTTGAATACAGCTTGCCATCATGCTGGCCATCA +
Preference number: 6 (lower is better)
Translates to: PSLGIGTSMECL*VEYSLPSCWPS
Trigger: TGATGGCCAGCATGATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAGTCCCAATCCCCAGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS GCA 72 bp GAAAGCCTCAATCATGTCACTTGGAGGTCCACACCCTaGACTATTGCAGGCCCCGACTTCTATAAAATACTG +
Preference number: 6 (lower is better)
Translates to: ESLNHVTWRSTP*TIAGPDFYKIL
Trigger: CAGTATTTTATAGAAGTCGGGGCCTGCAATAGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS TCA 72 bp GAAGTCAGGAGATCGAGACCATCTTGGCTAACACGGTaGAACCCCGTCTCTACTTATGTGTTGACTTATCTG +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSTYVLTYL
Trigger: CAGATAAGTCAACACATAAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552913.5
CDS GCA 72 bp CTGAAGCTGAAGAATTGTCCACAATTGTCTGGGCAGTaGATGTGTATCTTCCAGCATGTTTCAGCTGCGCAT +
Preference number: 6 (lower is better)
Translates to: LKLKNCPQLSGQ*MCIFQHVSAAH
Trigger: ATGCGCAGCTGAAACATGCTGGAAGATACACATGCACTGCCCAGACAATTGTGGACAATTCTTCAGCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS GCA 72 bp GGACTTCTATGGAGTGTTTGTGAGTTGAATACAGCTTaGCATCATGCTGGCCATCAGGTCTGTAGAGTACCT +
Preference number: 6 (lower is better)
Translates to: GLLWSVCELNTA*HHAGHQVCRVP
Trigger: AGGTACTCTACAGACCTGATGGCCAGCATGATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CAA 72 bp TTAGATGGTATACTGGGCTCTCCTCTACCCAGTGTATaGGTTGCTACCACGCGGAATTCATACTCCATCCAT +
Preference number: 6 (lower is better)
Translates to: LDGILGSPLPSV*VATTRNSYSIH
Trigger: ATGGATGGAGTATGAATTCCGCGTGGTAGCAACCAATACACTGGGTAGAGGAGAGCCCAGTATACCATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS TCA 72 bp AGTAGAGATCACTGCCTATGTCCACCTCTGTGTCATTaGTGTGTTCTACCCACTCAGGGAATGCTTGAACAT +
Preference number: 6 (lower is better)
Translates to: SRDHCLCPPLCH*CVLPTQGMLEH
Trigger: ATGTTCAAGCATTCCCTGAGTGGGTAGAACACATCAATGACACAGAGGTGGACATAGGCAGTGATCTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS CAA 90 bp TTAATTCTGTTAGATGGTATACTGGGCTCTCCTCTACCCAGTGTATaGGTTGCTACCACGCGGAATTCATACTCCATCCATGGGATTAAG +
Preference number: 6 (lower is better)
Translates to: LILLDGILGSPLPSV*VATTRNSYSIHGIK
Trigger: CTTAATCCCATGGATGGAGTATGAATTCCGCGTGGTAGCAACCAATACACTGGGTAGAGGAGAGCCCAGTATACCATCTAACAGAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CCA 72 bp GGTGGCGTTTTCTCCAACTGTGATATCGGCATTAATTaGGGCCAATATAATTCGCGTAGGATCTGTGATAAC +
Preference number: 6 (lower is better)
Translates to: GGVFSNCDIGIN*GQYNSRRICDN
Trigger: GTTATCACAGATCCTACGCGAATTATATTGGCCCCAATTAATGCCGATATCACAGTTGGAGAAAACGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS CCA 72 bp ATTTGGTGCAGCACCGTCTGTTTTAATTCTGTTAGATaGTATACTGGGCTCTCCTCTACCCAGTGTATTGGT +
Preference number: 6 (lower is better)
Translates to: IWCSTVCFNSVR*YTGLSSTQCIG
Trigger: ACCAATACACTGGGTAGAGGAGAGCCCAGTATACCATCTAACAGAATTAAAACAGACGGTGCTGCACCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CAA 72 bp CTCCATGAAAACTTTGGTTTCGGTGCAGCTTTAGGTTaGCATTCAATTATCACCCTTCCACCTTTAGCAGCC +
Preference number: 6 (lower is better)
Translates to: LHENFGFGAALG*HSIITLPPLAA
Trigger: GGCTGCTAAAGGTGGAAGGGTGATAATTGAATGCAAACCTAAAGCTGCACCGAAACCAAAGTTTTCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS CAA 90 bp GTCCCTTTACTCCATGAAAACTTTGGTTTCGGTGCAGCTTTAGGTTaGCATTCAATTATCACCCTTCCACCTTTAGCAGCCAGGATCTTT +
Preference number: 6 (lower is better)
Translates to: VPLLHENFGFGAALG*HSIITLPPLAARIF
Trigger: AAAGATCCTGGCTGCTAAAGGTGGAAGGGTGATAATTGAATGCAAACCTAAAGCTGCACCGAAACCAAAGTTTTCATGGAGTAAAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS CAA 90 bp TTTCTGTTTTTACCTCTCACTACAAGGTCAGCTGAAGCTGAAGAATaGTCCACAATTGTCTGGGCAGTGCATGTGTATCTTCCAGCATGT +
Preference number: 6 (lower is better)
Translates to: FLFLPLTTRSAEAEE*STIVWAVHVYLPAC
Trigger: ACATGCTGGAAGATACACATGCACTGCCCAGACAATTGTGGACAATTCTTCAGCTTCAGCTGACCTTGTAGTGAGAGGTAAAAACAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547702.5
ENST00000547849.5
CDS TCA 72 bp GTCTTGGTCTGGATAGTGTATTTAGAAATAGGACTATaGTTGTCTGAACCACGGCTCCAAGTAAGTGCCACA +
Preference number: 6 (lower is better)
Translates to: VLVWIVYLEIGL*LSEPRLQVSAT
Trigger: TGTGGCACTTACTTGGAGCCGTGGTTCAGACAATCATAGTCCTATTTCTAAATACACTATCCAGACCAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000551295.7
CDS CAA 90 bp TGGAAACAAAGCAGGAATAATTGCCTTTGTCGGAAGCCTCAACATTaGCAATGTAGAGATTGCCATTTGTCTGAGACACAAATCGCCGTT +
Preference number: 6 (lower is better)
Translates to: WKQSRNNCLCRKPQH*QCRDCHLSETQIAV
Trigger: AACGGCGATTTGTGTCTCAGACAAATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCGACAAAGGCAATTATTCCTGCTTTGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS TCA 72 bp CAAGGTTTCCTCCTACCATACTGTATCGATCACTTGTaGGATCAACGTCCCCATTATTCATTCTCCATTTGT +
Preference number: 6 (lower is better)
Translates to: QGFLLPYCIDHL*DQRPHYSFSIC
Trigger: ACAAATGGAGAATGAATAATGGGGACGTTGATCTCACAAGTGATCGATACAGTATGGTAGGAGGAAACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS GCA 72 bp GCAGGAATAATTGCCTTTGTCGGAAGCCTCAACATTTaGAATGTAGAGATTGCCATTTGTCTGAGACACAAA +
Preference number: 6 (lower is better)
Translates to: AGIIAFVGSLNI*NVEIAICLRHK
Trigger: TTTGTGTCTCAGACAAATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCGACAAAGGCAATTATTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS GCA 72 bp TCCTTTGTTGTTGAAGGCCTTGACTTTAACTTGAAATaGAGTGGAAGGGCTCATGGTTTCATCTTTATGGAC +
Preference number: 6 (lower is better)
Translates to: SFVVEGLDFNLK*SGRAHGFIFMD
Trigger: GTCCATAAAGATGAAACCATGAGCCCTTCCACTGCATTTCAAGTTAAAGTCAAGGCCTTCAACAACAAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000550305.1
ENST00000551295.7
CDS CAA 72 bp AGCAGGAATAATTGCCTTTGTCGGAAGCCTCAACATTaGCAATGTAGAGATTGCCATTTGTCTGAGACACAA +
Preference number: 6 (lower is better)
Translates to: SRNNCLCRKPQH*QCRDCHLSETQ
Trigger: TTGTGTCTCAGACAAATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCGACAAAGGCAATTATTCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS CAA 90 bp TATGGTTTTGTTGTTCGTTCAGGTATTGGAATGAGTGGGATGAATTaGCTGAACACGCTCTTTGTAATAGAAGGACTGGAAACAAAGCAG +
Preference number: 6 (lower is better)
Translates to: YGFVVRSGIGMSGMN*LNTLFVIEGLETKQ
Trigger: CTGCTTTGTTTCCAGTCCTTCTATTACAAAGAGCGTGTTCAGCAAATTCATCCCACTCATTCCAATACCTGAACGAACAACAAAACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7
CDS CAA 72 bp TTGATTGGCTGCTCTTCAAAAATTGGTCCAAATCCTTaGTCTTCCTCAGAAACTGCTAAACAGGTAGTAATA +
Preference number: 6 (lower is better)
Translates to: LIGCSSKIGPNP*SSSETAKQVVI
Trigger: TATTACTACCTGTTTAGCAGTTTCTGAGGAAGACAAAGGATTTGGACCAATTTTTGAAGAGCAGCCAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348761.2
CDS TCA 72 bp ACATTTTGGCCCATCAATGCATATACATCCTTGAACTaGACTACAATATCAGCAGGATATGGTTTTGTTGTT +
Preference number: 6 (lower is better)
Translates to: TFWPINAYTSLN*TTISAGYGFVV
Trigger: AACAACAAAACCATATCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATATGCATTGATGGGCCAAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347616.5
ENST00000348761.2
ENST00000547702.5
ENST00000547849.5
ENST00000551295.7