RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTLN (Homo sapiens)

Ensembl gene IDs: ENSG00000044459

Ensembl transcript IDs: ENST00000380641.4, ENST00000380647.8, ENST00000461247.1, ENST00000484374.1

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATGGTCTGGGAAACCACTGGAGGGACTTGAAGAGAGCAGTGATCTaGTTTGACTCACAAAGTTTTGGCAATAATATCCTGGCACCTATG +
Preference number: 1 (lower is better)
Translates to: NGLGNHWRDLKRAVI*FDSQSFGNNILAPM
Trigger: CATAGGTGCCAGGATATTATTGCCAAAACTTTGTGAGTCAAATCAGATCACTGCTCTCTTCAAGTCCCTCCAGTGGTTTCCCAGACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR GCA 90 bp AGGAGAGCTTTCTTTATCCTTAGTCTTGGAACAGGCCCCCAGTTATaGTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCT +
Preference number: 1 (lower is better)
Translates to: RRAFFILSLGTGPQL*SHISLYYYYNIHHS
Trigger: AGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGGGGCCTGTTCCAAGACTAAGGATAAAGAAAGCTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR CCA 90 bp ATCCTGGCACCTATGTCAAAAGGCTTAAGATCAGAACAAAGAAACTaGCAAGTTACTGCAATAATCCAGGTAATATGTGATAGTGGCCTG +
Preference number: 1 (lower is better)
Translates to: ILAPMSKGLRSEQRN*QVTAIIQVICDSGL
Trigger: CAGGCCACTATCACATATTACCTGGATTATTGCAGTAACTTGCCAGTTTCTTTGTTCTGATCTTAAGCCTTTTGACATAGGTGCCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR CCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCTCTCCCCCTGTCGCCTaGCTGGAGTGCAATGGTGCG +
Preference number: 2 (lower is better)
Translates to: RYNFKVRINLSISEAPYSSPPVA*LECNGA
Trigger: CGCACCATTGCACTCCAGCCAGGCGACAGGGGGAGA...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR GCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACGTCGCCTGGCTGGAGTaGAATGGTGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: YNFKVRINLSISEAPYSHVAWLE*NGAILA
Trigger: AGCCAAGATCGCACCATTGCACTCCAGCCAGGCGAC...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR CCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGTCATGTTGGCCAGGATaGTCTCGATCTCTTGACCTT +
Preference number: 2 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQSCWPG*SRSLDL
Trigger: AAGGTCAAGAGATCGAGACCATCCTGGCCAACATGA...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTGATCTCTTGACCTTGTaGTTCGCCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFDLLTL*FARLSL
Trigger: GAGGCTGAGGCGGGCGAATCACAAGGTCAAGAGATC...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTGCCTGGACAGAATGGTaGCAGCAAGGGTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFAWTEW*QQGWWE
Trigger: TTCCCACCACCCTTGCTGTCACCATTCTGTCCAGGC...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR GCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCACAGGCCCCCAGTTATaGTCCCATATTTCCCTCTAC +
Preference number: 2 (lower is better)
Translates to: RYNFKVRINLSISEAPYSTGPQL*SHISLY
Trigger: GTAGAGGGAAATATGGGAGCATAACTGGGGGCCTGT...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR CCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACACACTTTACAGGACATaGAGACTGGGGAGGACCACA +
Preference number: 2 (lower is better)
Translates to: YNFKVRINLSISEAPYSHTLYRT*RLGRTT
Trigger: TGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGTGT...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACGGGACAGCTAAAAACTaGAGGAAGAAAGCCACCCAA +
Preference number: 2 (lower is better)
Translates to: YNFKVRINLSISEAPYSHGTAKN*RKKATQ
Trigger: TTGGGTGGCTTTCTTCCTTCAGTTTTTAGCTGTCCC...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR CCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGCCAATTATAGTACAATaGAAGCCAAGAGGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQPIIVQ*KPRGEK
Trigger: TTTTTCCCCTCTTGGCTTCCATTGTACTATAATTGG...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCTTGGGTAAACCTTCTTaGAAGGCTCCTAAAACAACT +
Preference number: 2 (lower is better)
Translates to: RYNFKVRINLSISEAPYSLGKPS*KAPKTT
Trigger: AGTTGTTTTAGGAGCCTTTCAAGAAGGTTTACCCAA...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACCAAAAGCTAAAAATGTaGAGCACTTCAGGTTTCAGG +
Preference number: 2 (lower is better)
Translates to: YNFKVRINLSISEAPYSHQKLKM*STSGFR
Trigger: CCTGAAACCTGAAGTGCTTCACATTTTTAGCTTTTG...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACAGGGAATTTCTGGTTTaGACTAGAGTCCATTTGGAA +
Preference number: 2 (lower is better)
Translates to: YNFKVRINLSISEAPYSHREFLV*TRVHLE
Trigger: TTCCAAATGGACTCTAGTTCAAACCAGAAATTCCCT...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR GCA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGGTGTCAGGATTGCAATaGATGTATTCCAATCACACC +
Preference number: 2 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLVSGLQ*MYSNHT
Trigger: GGTGTGATTGGAATACATGCATTGCAATCCTGACAC...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR-3UTR GCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTCTGTATCTTCCTGCTTaGTATCATCTAGGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: PSYAPIFPSTTITTYIILLYLPA*YHLGPW
Trigger: CCAAGGACCTAGATGATAGCAAGCAGGAAGATACAG...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR CCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACTCAGCAAAGTATTACTaGTATGACACCATCAAGGAG +
Preference number: 2 (lower is better)
Translates to: YNFKVRINLSISEAPYSHSAKYY*YDTIKE
Trigger: CTCCTTGATGGTGTCATACCAGTAATACTTTGCTGA...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCAAGAGAGCAGTGATCTaGTTTGACTCACAAAGTTTT +
Preference number: 2 (lower is better)
Translates to: RYNFKVRINLSISEAPYSKRAVI*FDSQSF
Trigger: AAAACTTTGTGAGTCAAATCAGATCACTGCTCTCTT...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCAAAAGAAGGCAAAGATaGGATCAGAGAGGTAATGTA +
Preference number: 2 (lower is better)
Translates to: RYNFKVRINLSISEAPYSKRRQR*DQRGNV
Trigger: TACATTACCTCTCTGATCTCATCTTTGCCTTCTTTT...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR GCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCTTTTCAGATTTGGGATaGTCAGCCAGTAAATGTAAT +
Preference number: 2 (lower is better)
Translates to: RYNFKVRINLSISEAPYSFSDLG*SASKCN
Trigger: ATTACATTTACTGGCTGAGCATCCCAAATCTGAAAA...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR GCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACAAACTGGCAAGTTACTaGAATAATCCAGGTAATATG +
Preference number: 2 (lower is better)
Translates to: YNFKVRINLSISEAPYSHKLASY*NNPGNM
Trigger: CATATTACCTGGATTATTGCAGTAACTTGCCAGTTT...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR CCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACTCAATTTTTCAGATTTaGGATGCTCAGCCAGTAAAT +
Preference number: 2 (lower is better)
Translates to: YNFKVRINLSISEAPYSHSIFQI*DAQPVN
Trigger: ATTTACTGGCTGAGCATCCCAAATCTGAAAAATTGA...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTATTCCATTCCAGTTTTaGGACTATACTCCTAGTATG +
Preference number: 2 (lower is better)
Translates to: PSYAPIFPSTTITTYIILIPFQF*DYTPSM
Trigger: CATACTAGGAGTATAGTCTCAAAACTGGAATGGAAT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR TCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTTCAGATAAGGGATATTaGACCTGCAGTGTAACTTTG +
Preference number: 2 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFSDKGY*TCSVTL
Trigger: CAAAGTTACACTGCAGGTTCAATATCCCTTATCTGA...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR GCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTAGGCATGAACCACCATaGTCAGCTAACTTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFRHEPP*SANFLY
Trigger: ATACAAAAAGTTAGCTGAGCATGGTGGTTCATGCCT...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR GCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTGAAGTAGTCGAATTCTaGACCTGTACTGAAAACATA +
Preference number: 2 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFEVVEF*TCTENI
Trigger: TATGTTTTCAGTACAGGTGCAGAATTCGACTACTTC...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR TCA 72 bp ACCAAGGGCAAATGTGGGAGGCAGGCACCAGTATGGTaGATTAGAGGAACCAAAAAGGGTATGGCAGGAACA +
Preference number: 3 (lower is better)
Translates to: TKGKCGRQAPVW*IRGTKKGMAGT
Trigger: TGTTCCTGCCATACCCTTTTTGGTTCCTCTAATTCACCATACTGGTGCCTGCCTCCCACATTTGCCCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR TCA 72 bp AACCAAAAAGGGTATGGCAGGAACACGGTGAAGAGGTaGAATGAGGTGGGAATGTCCAGGAATCTAAATAAG +
Preference number: 3 (lower is better)
Translates to: NQKGYGRNTVKR*NEVGMSRNLNK
Trigger: CTTATTTAGATTCCTGGACATTCCCACCTCATTTCACCTCTTCACCGTGTTCCTGCCATACCCTTTTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR-3UTR CAA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACTATGCTCAGGCCAATTaGTGTGTACCAAGCCTGCTC +
Preference number: 3 (lower is better)
Translates to: RVVEIHSISYINQHINENYAQAN*CVPSLL
Trigger: GAGCAGGCTTGGTACACACAAATTGGCCTGAGCATA...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR-3UTR CAA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCACCTGCAGTGTAACTTaGAAAGTCAAGGTGATTAGA +
Preference number: 3 (lower is better)
Translates to: RYNFKVRINLSISEAPYSTCSVT*KVKVIR
Trigger: TCTAATCACCTTGACTTTCAAAGTTACACTGCAGGT...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR GCA 72 bp CTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTaGTCAGTTTCTTTTAATGCACTAGAAGGAAAATCA +
Preference number: 3 (lower is better)
Translates to: LLMLRPICVYQA*SVSFNALEGKS
Trigger: TGATTTTCCTTCTAGTGCATTAAAAGAAACTGAGCAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR GCA 72 bp TTCTTTATCCTTAGTCTTGGAACAGGCCCCCAGTTATaGTCCCATATTTCCCTCTACTACTATTACAACATA +
Preference number: 3 (lower is better)
Translates to: FFILSLGTGPQL*SHISLYYYYNI
Trigger: TATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGGGGCCTGTTCCAAGACTAAGGATAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR CAA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACGATACCGTGTCAGGATaGCAATGCATGTATTCCAAT +
Preference number: 3 (lower is better)
Translates to: RVVEIHSISYINQHINENDTVSG*QCMYSN
Trigger: ATTGGAATACATGCATTGCAATCCTGACACGGTATC...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR-3UTR CAA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAGATTTGTGGCAATATTaGTATTCGACCATCAGATGC +
Preference number: 3 (lower is better)
Translates to: ILYLLILQICCSLDHLWPDLWQY*YSTIRC
Trigger: GCATCTGATGGTCGAATACAAATATTGCCACAAATC...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR-3UTR CAA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTCTATCATCTAGGTCCTaGGGAAAACACAAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFLSSRS*GKHKGN
Trigger: GTTGCCTTTGTGTTTTCCCAAGGACCTAGATGATAG...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR CCA 72 bp CTTCTTATTTTGGTATTGAACCTGACTATTGATAGTTaGAGCAGATACCGTGTCAGGATTGCAATGCATGTA +
Preference number: 3 (lower is better)
Translates to: LLILVLNLTIDS*SRYRVRIAMHV
Trigger: TACATGCATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATACCAAAATAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR-3UTR CAA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTAAATCCTGGAAAATATaGATCCTAAAGCCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFKSWKI*ILKPSS
Trigger: TGAGGAGGGCTTTAGGATCAATATTTTCCAGGATTT...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR-3UTR CAA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTCAAAGGAAATGCTCATaGGAGCATTTCAGATTTCAA +
Preference number: 3 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFQRKCS*EHFRFQ
Trigger: TTGAAATCTGAAATGCTCCAATGAGCATTTCCTTTG...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR CCA 72 bp CCTATGTCAAAAGGCTTAAGATCAGAACAAAGAAACTaGCAAGTTACTGCAATAATCCAGGTAATATGTGAT +
Preference number: 3 (lower is better)
Translates to: PMSKGLRSEQRN*QVTAIIQVICD
Trigger: ATCACATATTACCTGGATTATTGCAGTAACTTGCCAGTTTCTTTGTTCTGATCTTAAGCCTTTTGACATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR TCA 72 bp AATACACAGTATCTCCTACATAAACCAGCACATCAATaGGAACAGATTCAATTGGACCACACAATTTATTTC +
Preference number: 3 (lower is better)
Translates to: NTQYLLHKPAHQ*EQIQLDHTIYF
Trigger: GAAATAAATTGTGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
3UTR GCA 72 bp AACATTTTTGAGCACCAGTATGATGCTCAAAGGAAATaGTCATTGGAGCATTTCAGATTTCAATTTTTCAGA +
Preference number: 3 (lower is better)
Translates to: NIFEHQYDAQRK*SLEHFRFQFFR
Trigger: TCTGAAAAATTGAAATCTGAAATGCTCCAATGAGCATTTCCTTTGAGCATCATACTGGTGCTCAAAAATGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACGGGCGAAGGGTGCGGTaGGGGAGGCGAACGCGCCGC +
Preference number: 4 (lower is better)
Translates to: YNFKVRINLSISEAPYSHGRRVR*GRRTRR
Trigger: GCGGCGCGTTCGCCTCCCTCACCGCACCCTTCGCCC...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACAGGGCGAAGGGTGCGGTaGGGGAGGCGAACGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SISYINQHINENRFNWTTGRRVR*GRRTRR
Trigger: GCGGCGCGTTCGCCTCCCTCACCGCACCCTTCGCCC...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGCCCTCGCCGGCCCCCTaGCCCTTCTTCACCCACCCA +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMPSPAP*PFFTHP
Trigger: TGGGTGGGTGAAGAAGGGTCAGGGGGCCGGCGAGGG...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGGCGAACGCGCCGCCATaGCTGCGGCTGCTAACGGGT +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQANAPP*LRLLTG
Trigger: ACCCGTTAGCAGCCGCAGCCATGGCGGCGCGTTCGC...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGCAACACGTGGGGACCTaGGGCCCAGCTGTCGCGCTG +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQQHVGT*GPAVAL
Trigger: CAGCGCGACAGCTGGGCCCCAGGTCCCCACGTGTTG...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACATCCCCGCCCAACACGTaGGGACCTGGGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTSPPNT*GPGAQL
Trigger: CAGCTGGGCCCCAGGTCCCCACGTGTTGGGCGGGGA...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGGCGAACGCGCCGCCATaGCTGCGGCTGCTAACGGGT +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMANAPP*LRLLTG
Trigger: ACCCGTTAGCAGCCGCAGCCATGGCGGCGCGTTCGC...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGGCGATCTTGGCTCACTaGGACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQAILAH*DLRLPG
Trigger: ACCTGGGAGGCGGAGGTCGCAGTGAGCCAAGATCGC...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTACCCCATGGGCGCGCTaGGGAGGGGAGCATGAGCCG +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILTPWAR*GGEHEP
Trigger: CGGCTCATGCTCCCCTCCTCAGCGCGCCCATGGGGT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACAGGCCTCGCTGCGCATTaGGTGTACTTCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTGLAAH*VYFSSP
Trigger: CGGGGAGCTGAAGTACACGCAATGCGCAGCGAGGCC...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCACAACACGTGGGGACCTaGGGCCCAGCTGTCGCGCTG +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPQHVGT*GPAVAL
Trigger: CAGCGCGACAGCTGGGCCCCAGGTCCCCACGTGTTG...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACATCTCCCCCTGTCGCCTaGCTGGAGTGCAATGGTGCG +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTSPPVA*LECNGA
Trigger: CGCACCATTGCACTCCAGCCAGGCGACAGGGGGAGA...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTCCCTCGCCGGCCCCCTaGCCCTTCTTCACCCACCCA +
Preference number: 4 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFPSPAP*PFFTHP
Trigger: TGGGTGGGTGAAGAAGGGTCAGGGGGCCGGCGAGGG...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTGACCACCTCCCGCGCTaGGCCGGCAAAACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFDHLPR*AGKTRG
Trigger: GCCTCGGGTTTTGCCGGCGCAGCGCGGGAGGTGGTC...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACACCTCCTCTACCGAGATaGCCTCTAGCCGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTPPLPR*PLAVWT
Trigger: GGTCCAGACGGCTAGAGGGCATCTCGGTAGAGGAGG...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGGTCGCCTGGCTGGAGTaGAATGGTGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQVAWLE*NGAILA
Trigger: AGCCAAGATCGCACCATTGCACTCCAGCCAGGCGAC...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACAAACCCGAGGCCTCGCTaGGCATTGCGTGTACTTCAG +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTNPRPR*ALRVLQ
Trigger: CTGAAGTACACGCAATGCGCAGCGAGGCCTCGGGTT...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp TGGAGCAGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAGCCATACAAAACAGGTaGCAGGCCAGATTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: WSRYRVRIAMHVFQSHHIAIQNR*QARFAL
Trigger: CAGGGCGAATCTGGCCTGCCACCTGTTTTGTATGGC...TATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACGATCTCTTGACCTTGTaGTTCGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YNFKVRINLSISEAPYSHDLLTL*FARLSL
Trigger: GAGGCTGAGGCGGGCGAATCACAAGGTCAAGAGATC...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTCCTCCTCTACCGAGATaGCCTCTAGCCGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSPPLPR*PLAVWT
Trigger: GGTCCAGACGGCTAGAGGGCATCTCGGTAGAGGAGG...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGAGATTCTGCAGCTCCTaGAGTTCCTTCCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQRFCSS*SSFLTR
Trigger: CCTGGTCAGGAAGGAACTGCAGGAGCTGCAGAATCT...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGCTGCTGGATCAGCTCTaGTTGCTGGGCTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQLLDQL*LLGCMC
Trigger: ACACATACAGCCCAGCAAGCAGAGCTGATCCAGCAG...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGACAAGGAGCCAGCCATaGGGAAAGTTGAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMTRSQP*GKLSAE
Trigger: CTCTGCACTCAACTTTCCTCATGGCTGGCTCCTTGT...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTCGGGGAAGGTGGAGCTaGATGATGACAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ALICGNICIRPSDATLFPRGRWS*MMTRSQ
Trigger: CTGGCTCCTTGTCATCATTCAGCTCCACCTTCCCCG...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGCAGAGAATGTGTCTCTaGGGGACCGGGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLQRMCL*GTGEGG
Trigger: TCCACCTTCCCCGGTCCCTCAGAGACACATTCTCTG...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATGGCCTCGCTGCGCATTaGGTGTACTTCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHGLAAH*VYFSSP
Trigger: CGGGGAGCTGAAGTACACGCAATGCGCAGCGAGGCC...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGAACCCGAGGCCTCGCTaGGCATTGCGTGTACTTCAG +
Preference number: 4 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLNPRPR*ALRVLQ
Trigger: CTGAAGTACACGCAATGCGCAGCGAGGCCTCGGGTT...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGACACTTTACAGGACATaGAGACTGGGGAGGACCACA +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQTLYRT*RLGRTT
Trigger: TGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGTGT...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGTGGGGACAAAGACCTTaGACGTTTCACAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMWGQRP*TFHRWF
Trigger: GAACCACCTGTGAAACGTTCAAGGTCTTTGTCCCCA...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGCTGGAGTACTCCTCTTaGCCTCATCATCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMLEYSS*PHHLHQ
Trigger: CTGGTGAAGATGATGAGGTCAAGAGGAGTACTCCAG...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACACTCCTCCTTTAGGCTaGTCAGCTCTTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: YNFKVRINLSISEAPYSHTPPLG*SALPPA
Trigger: TGCTGGAGGAAGAGCTGAGCAGCCTAAAGGAGGAGT...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGATCAGCTCTGCTTGCTaGGCTGTATGTGTACTGTTC +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQISSAC*AVCVLF
Trigger: GAACAGTACACATACAGCCCAGCAAGCAGAGCTGAT...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTGCTCTGTCTGCTGACTaGTGTGATTTCTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFALSAD*CDFSIG
Trigger: CCCAATGGAGAAATCACACCAGTCAGCAGACAGAGC...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp TGGAGCAGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAGAACCAAAAAGGGTATaGCAGGAACACGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: WSRYRVRIAMHVFQSHHIEPKRV*QEHGEE
Trigger: CTCTTCACCGTGTTCCTGCCATACCCTTTTTGGTTC...TATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCTGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGATGAGGTACCTGTGCTaGGTAGTCTGGATCACTTTC +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMMRYLC*VVWITF
Trigger: GAAAGTGATCCAGACTACTCAGCACAGGTACCTCAT...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACCCCAGCCGTCCTTGCTaGGGTTCTCAAACACATTGC +
Preference number: 4 (lower is better)
Translates to: RVVEIHSISYINQHINENPSRPC*GSQTHC
Trigger: GCAATGTGTTTGAGAACCTCAGCAAGGACGGCTGGG...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp TGGAGCAGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATACTTCTGCCAAACTTGTaGTTTCAGATGAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: WSRYRVRIAMHVFQSHHILLPNL*FQMRTP
Trigger: TGGAGTCCTCATCTGAAATCACAAGTTTGGCAGAAG...TATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCTGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACAACTCCTCCTTTAGGCTaGTCAGCTCTTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SISYINQHINENRFNWTTTPPLG*SALPPA
Trigger: TGCTGGAGGAAGAGCTGAGCAGCCTAAAGGAGGAGT...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGCTCAAATGTGCTTCCTaGTTCCTCAATTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQLKCAS*FLNFSR
Trigger: CCTGGAGAAATTGAGGAAGCAGGAAGCACATTTGAG...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACTGGATCAGCTCTGCTTaGTGGGCTGTATGTGTACTG +
Preference number: 4 (lower is better)
Translates to: YNFKVRINLSISEAPYSHWISSA*WAVCVL
Trigger: CAGTACACATACAGCCCAGCAAGCAGAGCTGATCCA...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACACAGGCCCCCAGTTATaGTCCCATATTTCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: YNFKVRINLSISEAPYSHTGPQL*SHISLY
Trigger: GTAGAGGGAAATATGGGAGCATAACTGGGGGCCTGT...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGATCAGCTCTGCTTGCTaGGCTGTATGTGTACTGTTC +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMISSAC*AVCVLF
Trigger: GAACAGTACACATACAGCCCAGCAAGCAGAGCTGAT...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGTCTGGATCACTTTCTTaGGGTAAAGGAAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMSGSLS*GKGRGA
Trigger: AGCACCTCTTCCTTTACCTCAAGAAAGTGATCCAGA...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTGTCTCCTCAGGGAAGTaGCTTCTGTCTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFVSSGK*LLSPAH
Trigger: GTGAGCTGGAGACAGAAGTCACTTCCCTGAGGAGAC...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp TGGAGCAGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATATGCAATGCTAATTCTTaGAGCTGCTTAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: WSRYRVRIAMHVFQSHHICNANS*SCLDAA
Trigger: AGCAGCATCTAAGCAGCTTCAAGAATTAGCATTGCA...TATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCTGCTCCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACCTGGGCTTTATGGGTTaGGGTTTTACAGGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: RVVEIHSISYINQHINENLGFMG*GFTGVP
Trigger: AGGGACGCCTGTAAAACCTCAACCCATAAAGCCCAG...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTAACACGGTGAAGAGGTaGAATGAGGTGGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSNTVKR*NEVGMS
Trigger: GGACATTCCCACCTCATTTCACCTCTTCACCGTGTT...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCTGCAGCTCCTaGAGTTCCTTCCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RVVEIHSISYINQHINENRFCSS*SSFLTR
Trigger: CCTGGTCAGGAAGGAACTGCAGGAGCTGCAGAATCT...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTTGGATCAGCTCTGCTTaGTGGGCTGTATGTGTACTG +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSWISSA*WAVCVL
Trigger: CAGTACACATACAGCCCAGCAAGCAGAGCTGATCCA...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACCTGCTGGATCAGCTCTaGTTGCTGGGCTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: RVVEIHSISYINQHINENLLDQL*LLGCMC
Trigger: ACACATACAGCCCAGCAAGCAGAGCTGATCCAGCAG...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACATCTGGGTTTGTAACCTaGAGACGTTTCCACAAAGAC +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTSGFVT*RRFHKD
Trigger: GTCTTTGTGGAAACGTCTCCAGGTTACAAACCCAGA...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACCACTTGTGTGAGATCTaGGTTTGTAACCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: YNFKVRINLSISEAPYSHHLCEI*VCNLET
Trigger: CGTCTCCAGGTTACAAACCCAGATCTCACACAAGTG...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCTCATGTTGGCCAGGATaGTCTCGATCTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: RYNFKVRINLSISEAPYSSCWPG*SRSLDL
Trigger: AAGGTCAAGAGATCGAGACCATCCTGGCCAACATGA...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTCCATATTGAGAACCTaGAGCTGCTGGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ALICGNICIRPSDATLFPSILRT*SCWISS
Trigger: AGAGCTGATCCAGCAGCTTCAGGTTCTCAATATGGA...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACGCTCTTCTGAGTCTGTaGAAGAGCTCTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: RVVEIHSISYINQHINENALLSL*KSSLGT
Trigger: TGTCCCCAAAGAGCTCTTTCACAGACTCAGAAGAGC...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTCTCTCTTTATTTTCCTaGTTTCAGTCATGCCACTGC +
Preference number: 4 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFLSLFS*FQSCHC
Trigger: GCAGTGGCATGACTGAAATCAGGAAAATAAAGAGAG...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACATTGAGAACAGTGTGGTaGCGACCCACAGAGCAATTT +
Preference number: 4 (lower is better)
Translates to: SISYINQHINENRFNWTTLRTVW*RPTEQF
Trigger: AAATTGCTCTGTGGGTCGTCACCACACTGTTCTCAA...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTATGGCAGGAACACGGTaGAGAGGTGAAATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFMAGTR*RGEMRW
Trigger: CCACCTCATTTCACCTCTTCACCGTGTTCCTGCCAT...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGAGCCATGAGGAAAGTTaGGTGCAGAGTATTCTAGAA +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMSHEES*VQSILE
Trigger: TTCTAGAATACTCTGCACTCAACTTTCCTCATGGCT...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTCAACTTAAGTATCAGTaGAGCCCCCTACTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILQLKYQ*SPLLPH
Trigger: GTGTGGGAGTAGGGGGCTTCACTGATACTTAAGTTG...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTTCTGTAGCCGTTCCTTaGGTTTTTCATGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSSVAVP*VFHGHL
Trigger: GAGATGCCCATGAAAAACGCAAGGAACGGCTACAGA...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGTTTCAGTCATGCCACTaGCTTCTTCCCACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMFQSCH*LLPTVL
Trigger: TAAAACAGTGGGAAGAAGGCAGTGGCATGACTGAAA...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCACTTCAGAATCACTGCTaGTTTCACTCACATCCTCCC +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPLQNHC*FHSHPP
Trigger: GGGAGGATGTGAGTGAAAGCAGCAGTGATTCTGAAG...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TGGAGCAGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATATTGAAGCTGCTTAGATaGTGCTGTTTCAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: WSRYRVRIAMHVFQSHHILKLLR*CCFNFC
Trigger: GCAGAAATTGAAACAGCAGCATCTAAGCAGCTTCAA...TATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCTGCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGACATGGACATCATTTTaGAACTCTTTGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMTWTSF*NSLAKA
Trigger: GGCTTTGGCCAAAGAGTTGCAAAATGATGTCCATGT...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TGGAGCAGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATATGTGTGTACCAAGCCTaGTCAGTTTCTTTTAATGCA +
Preference number: 4 (lower is better)
Translates to: WSRYRVRIAMHVFQSHHICVYQA*SVSFNA
Trigger: TGCATTAAAAGAAACTGAGCAGGCTTGGTACACACA...TATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACCTGTATCTTCCTGCTTaGTATCATCTAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: YNFKVRINLSISEAPYSHLYLPA*YHLGPW
Trigger: CCAAGGACCTAGATGATAGCAAGCAGGAAGATACAG...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGGATGCTCAAAGGAAATaGTCATTGGAGCATTTCAGA +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQDAQRK*SLEHFR
Trigger: TCTGAAATGCTCCAATGAGCATTTCCTTTGAGCATC...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTGGGAGAAACCCTTGTTaGCAGATATGTTTTCTGACA +
Preference number: 4 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFGRNPC*QICFLT
Trigger: TGTCAGAAAACATATCTGCCAACAAGGGTTTCTCCC...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGTTACTGCTCTGTAGTTaGTCTGTAACATCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMLLLCS*SVTSVA
Trigger: GGCTACAGATGTTACAGACCAACTACAGAGCAGTAA...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTAAGGTCTGGGCTTTATaGGTTGAGGTTTTACAGGCG +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSKVWAL*VEVLQA
Trigger: CGCCTGTAAAACCTCAACCCATAAAGCCCAGACCTT...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGTCAGCAAAGTATTACTaGTATGACACCATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQSAKYY*YDTIKE
Trigger: CTCCTTGATGGTGTCATACCAGTAATACTTTGCTGA...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGGTATTTTGGCATCCTTaGCTTGCAGAATTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQVFWHP*LAEFLE
Trigger: TTCTAGAAATTCTGCAAGTCAAGGATGCCAAAATAC...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTCCATATTGAGAACCTaGAGCTGCTGGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILSILRT*SCWISS
Trigger: AGAGCTGATCCAGCAGCTTCAGGTTCTCAATATGGA...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACATCAGATAAGGGATATTaGACCTGCAGTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTSDKGY*TCSVTL
Trigger: CAAAGTTACACTGCAGGTTCAATATCCCTTATCTGA...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACAAGGCATGAACCACCATaGTCAGCTAACTTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTRHEPP*SANFLY
Trigger: ATACAAAAAGTTAGCTGAGCATGGTGGTTCATGCCT...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGAGCTCATCATTTTCTTaGCTCTTTAGTTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMSSSFS*LFSCSA
Trigger: GGCACTACAACTAAAGAGCCAAGAAAATGATGAGCT...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGCATTTTGCAACTCTTTaGCCAAAGCCTTCACAAATG +
Preference number: 4 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMHFATL*PKPSQM
Trigger: CATTTGTGAAGGCTTTGGCCAAAGAGTTGCAAAATG...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATGAAGCTGCCAAGGTCTaGGCTTTATGGGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHEAAKV*ALWVEV
Trigger: AACCTCAACCCATAAAGCCCAGACCTTGGCAGCTTC...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCACTGACTATTGATAGTTaGAGCAGATACCGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPLTIDS*SRYRVR
Trigger: CCTGACACGGTATCTGCTCCAACTATCAATAGTCAG...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTACAGGACATGGAGACTaGGGAGGACCACAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILTGHGD*GGPQRN
Trigger: ATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACATTGGCAATAATATCCTaGCACCTATGTCAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: QAEEFHSSFETILLVCFTLAIIS*HLCQKA
Trigger: AGCCTTTTGACATAGGTGCCAGGATATTATTGCCAA...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAAAGAGGTGCTCCCTGTaGTTCCTGAAGTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPKRCSL*FLKFFF
Trigger: AAAGAAAAACTTCAGGAATCACAGGGAGCACCTCTT...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCTTCAGCACTTGTCATaGTGCTCTTTCGGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHLQHLS*CSFGRN
Trigger: GTTTCTCCCGAAAGAGCATCATGACAAGTGCTGAAG...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTGTTTTCTTGGCATTCTaGAGTACACTGTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFVFLAF*STLFCC
Trigger: ACAACAAAACAGTGTACTTCAGAATGCCAAGAAAAC...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTCATCTGTTCATACTGTaGCTTTTCTTTTACAGCAAC +
Preference number: 4 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFHLFIL*LFFYSN
Trigger: GTTGCTGTAAAAGAAAAGTCACAGTATGAACAGATG...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTCAGCACTGCTCTAGCTaGAGTGGAAGACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFQHCSS*SGRLYL
Trigger: AAGATACAGTCTTCCACTTCAGCTAGAGCAGTGCTG...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACACATTTAGCAGGTCAGTaGAGCGGGTACTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: SISYINQHINENRFNWTTHLAGQ*SGYLIS
Trigger: AGAAATTAAGTACCCGCTGCACTGACCTGCTAAATG...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTCAATGCATTAGCTTCTaGCACTTGTCTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFQCISF*HLSPQG
Trigger: TCCCTGAGGAGACAAGTGGCAGAAGCTAATGCATTG...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACAGTTTGAGAGGTCTGTaGTTCAGAATCACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVVEIHSISYINQHINENSLRGL*FRITAA
Trigger: AGCAGCAGTGATTCTGAAGCACAGACCTCTCAAACT...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAGTGTCAGGATTGCAATaGATGTATTCCAATCACACC +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPVSGLQ*MYSNHT
Trigger: GGTGTGATTGGAATACATGCATTGCAATCCTGACAC...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGTTTTCAGATTTGGGATaGTCAGCCAGTAAATGTAAT +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQFSDLG*SASKCN
Trigger: ATTACATTTACTGGCTGAGCATCCCAAATCTGAAAA...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCACTTGTGTGAGATCTaGGTTTGTAACCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHHLCEI*VCNLET
Trigger: CGTCTCCAGGTTACAAACCCAGATCTCACACAAGTG...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTTCCTTGCGTTTTTCATaGGCATCTCTTAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSSLRFS*ASLSSS
Trigger: TGATGAGCTAAGAGATGCCCATGAAAAACGCAAGGA...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTCCCTGGACCACTTATaGCCATCTATAGCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: ALICGNICIRPSDATLFPSLDHL*PSIAVL
Trigger: TAAAACTGCTATAGATGGCCATAAGTGGTCCAGGGA...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCGCACACCTAAATACTTaGGTAAACCTTCTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RYNFKVRINLSISEAPYSAHLNT*VNLLER
Trigger: CCTTTCAAGAAGGTTTACCCAAGTATTTAGGTGTGC...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTATCTATGCAGATAACTaGGCAGGAAAGCTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILIYADN*AGKLSG
Trigger: GCCTGAAAGCTTTCCTGCCCAGTTATCTGCATAGAT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGTTTGCCTCTGGGAGATaGAATTATAAAAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQFASGR*NYKRLC
Trigger: ACAAAGTCTTTTATAATTCCATCTCCCAGAGGCAAA...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACCCTGGTTTTCCCTTTTaGAATATGCCAGTTCATTCC +
Preference number: 4 (lower is better)
Translates to: RVVEIHSISYINQHINENPGFPF*NMPVHS
Trigger: GGAATGAACTGGCATATTTCAAAAGGGAAAACCAGG...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTCCTTCAAGAAGTTTCTaGATGTACAACATCCATTCC +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSPSRSF*MYNIHS
Trigger: GGAATGGATGTTGTACATTCAGAAACTTCTTGAAGG...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGAAACCAGCACATCAATaGGAACAGATTCAATTGGAC +
Preference number: 4 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLKPAHQ*EQIQLD
Trigger: GTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTT...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTCTCAAATGTGCTTCCTaGTTCCTCAATTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFLKCAS*FLNFSR
Trigger: CCTGGAGAAATTGAGGAAGCAGGAAGCACATTTGAG...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTAGTCCTTTGGGGTCTTaGCATCTATATTTAAATATG +
Preference number: 4 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFSPLGS*HLYLNM
Trigger: CATATTTAAATATAGATGGCAAGACCCCAAAGGACT...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACAAAGCTGCTTAGATGCTaGTGTTTCAATTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SISYINQHINENRFNWTTKLLRC*CFNFCH
Trigger: ATGGCAGAAATTGAAACAGCAGCATCTAAGCAGCTT...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATTCTGGGTTTGTAACCTaGAGACGTTTCCACAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHSGFVT*RRFHKD
Trigger: GTCTTTGTGGAAACGTCTCCAGGTTACAAACCCAGA...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGTCTTGTCGAAGTTGTTaGGGATCTGCTCTCTTTATT +
Preference number: 4 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLSCRSC*GSALFI
Trigger: AATAAAGAGAGCAGATCCCCAACAACTTCGACAAGA...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTATGAAAATAGTCCTTTaGGGTCTTGCCATCTATATT +
Preference number: 4 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFMKIVL*GLAIYI
Trigger: AATATAGATGGCAAGACCCCAAAGGACTATTTTCAT...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTAAATCTGTTGCTCCCTaGACCACTTATGGCCATCTA +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFKSVAP*TTYGHL
Trigger: TAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTT...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAGTATTTTGGCATCCTTaGCTTGCAGAATTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPVFWHP*LAEFLE
Trigger: TTCTAGAAATTCTGCAAGTCAAGGATGCCAAAATAC...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTCTGTCTCCAGCTCACTaGTTTTTACTTGAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFLSPAH*FLLEVQ
Trigger: CTGAACTTCAAGTAAAAATCAGTGAGCTGGAGACAG...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTTCGGATACTTGCTGTTaGTGGAGGAGCTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFSDTCC*WRSFSL
Trigger: TAATGAAAAGCTCCTCCATCAACAGCAAGTATCCGA...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTCAAAAGCTAAAAATGTaGAGCACTTCAGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILQKLKM*STSGFR
Trigger: CCTGAAACCTGAAGTGCTTCACATTTTTAGCTTTTG...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTAGGGAATTTCTGGTTTaGACTAGAGTCCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILREFLV*TRVHLE
Trigger: TTCCAAATGGACTCTAGTTCAAACCAGAAATTCCCT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCTTGGCATCCTTGACTTaGAGAATTTCTAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: RYNFKVRINLSISEAPYSLASLT*RISRTF
Trigger: AAAAGTTCTAGAAATTCTGCAAGTCAAGGATGCCAA...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTCATTTAGCAGGTCAGTaGAGCGGGTACTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFHLAGQ*SGYLIS
Trigger: AGAAATTAAGTACCCGCTGCACTGACCTGCTAAATG...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTAGATTAGTAACACTTTaGCGGAGCATAGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSRLVTL*RSIASF
Trigger: AAATGAAGCTATGCTCCGGCAAAGTGTTACTAATCT...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAAAGTTGTTGGGGATCTaGTCTCTTTATTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPKLLGI*SLYFPD
Trigger: ATCAGGAAAATAAAGAGAGCAGATCCCCAACAACTT...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAACCTTCTGTAATGTCTaGTCCAACATTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPTFCNV*SNISFP
Trigger: TGGAAAAGAAATGTTGGAGCAGACATTACAGAAGGT...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACATCTTTATTGTCTGCCTaGTTGTCTGAAATCGTTGAT +
Preference number: 4 (lower is better)
Translates to: SISYINQHINENRFNWTTSLLSA*LSEIVD
Trigger: ATCAACGATTTCAGACAAGCAGGCAGACAATAAAGA...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTCTGGGAATTTTCTTCTaGCAAACTTGTGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: ALICGNICIRPSDATLFPLGIFF*QTCDFR
Trigger: TCTGAAATCACAAGTTTGGCAGAAGAAAATTCCCAG...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGCTAGCTCTTTTTCTCTaGTCTCTGTATCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLLALFL*SLYLLV
Trigger: AACAAGAAGATACAGAGACCAGAGAAAAAGAGCTAG...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTTTGGCTGTCTTCTGTTaGATCACTTTCTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFLAVFC*ITFFLV
Trigger: GACCAGAAAGAAAGTGATCCAACAGAAGACAGCCAA...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAATTCTGCTGTTTTCTTaGCATTCTGAAGTACACTGT +
Preference number: 4 (lower is better)
Translates to: ILYLLILQICCSLDHLWPILLFS*HSEVHC
Trigger: ACAGTGTACTTCAGAATGCCAAGAAAACAGCAGAAT...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCTCAATTTTTCAGATTTaGGATGCTCAGCCAGTAAAT +
Preference number: 4 (lower is better)
Translates to: RYNFKVRINLSISEAPYSSIFQI*DAQPVN
Trigger: ATTTACTGGCTGAGCATCCCAAATCTGAAAAATTGA...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR CAA 72 bp TTTGAGCACCAGTATGATGCTCAAAGGAAATGCTCATaGGAGCATTTCAGATTTCAATTTTTCAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: FEHQYDAQRKCS*EHFRFQFFRFG
Trigger: CCCAAATCTGAAAAATTGAAATCTGAAATGCTCCAATGAGCATTTCCTTTGAGCATCATACTGGTGCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
3UTR CAA 72 bp ACCTGTACTGAAAACATAAAAGGCAATAGCTTTGTTTaGAACACGTTCAGTATGAGATGCCCATTAGGAATC +
Preference number: 4 (lower is better)
Translates to: TCTENIKGNSFV*NTFSMRCPLGI
Trigger: GATTCCTAATGGGCATCTCATACTGAACGTGTTCAAAACAAAGCTATTGCCTTTTATGTTTTCAGTACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTTTGGGTAAACCTTCTTaGAAGGCTCCTAAAACAACT +
Preference number: 4 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFLGKPS*KAPKTT
Trigger: AGTTGTTTTAGGAGCCTTTCAAGAAGGTTTACCCAA...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTAAGAGAGCAGTGATCTaGTTTGACTCACAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILKRAVI*FDSQSF
Trigger: AAAACTTTGTGAGTCAAATCAGATCACTGCTCTCTT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTAAAGTATTACTGGTATaGCACCATCAAGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFKVLLV*HHQGEL
Trigger: AAGCTCTCCTTGATGGTGTCATACCAGTAATACTTT...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTTTGGCATCCTTGACTTaGAGAATTTCTAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSLASLT*RISRTF
Trigger: AAAAGTTCTAGAAATTCTGCAAGTCAAGGATGCCAA...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATTTCCCTTTTGAAATATaGCAGTTCATTCCACACAGC +
Preference number: 4 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHFPFEI*QFIPHS
Trigger: GCTGTGTGGAATGAACTGGCATATTTCAAAAGGGAA...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGATTTTCATTTCTCAATaGATTAGCTTCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLIFISQ*ISFCHL
Trigger: CAAGTGGCAGAAGCTAATGCATTGAGAAATGAAAAT...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTTTTAACAGACAATTCTaGTGTTTTCTTGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSFNRQF*CFLGIL
Trigger: CAGAATGCCAAGAAAACAGCAGAATTGTCTGTTAAA...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTTGCTGTTTCAATTTCTaGCATTGCAGATTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFCCFNF*HCRFSL
Trigger: GAGACTGAATCTGCAATGGCAGAAATTGAAACAGCA...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATATACCGTGTCAGGATTaGAATGCATGTATTCCAATC +
Preference number: 4 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHIPCQD*NACIPI
Trigger: GATTGGAATACATGCATTGCAATCCTGACACGGTAT...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGTACTTTTTCTTCTTATaGTCAGGCCAATTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLYFFFL*SGQFVC
Trigger: ACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTA...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTGAAGTAGTCGAATTCTaGACCTGTACTGAAAACATA +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILEVVEF*TCTENI
Trigger: TATGTTTTCAGTACAGGTGCAGAATTCGACTACTTC...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACACTTCTACTTTTTCATTaGCTAACAGCAATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SISYINQHINENRFNWTTLLLFH*LTAMSS
Trigger: AGAAGACATTGCTGTTAGCCAATGAAAAAGTAGAAG...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACCCTAATTTTATACATTaGGTTTGTGGTTCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: RVVEIHSISYINQHINENPNFIH*VCGSLQ
Trigger: TTGCAGGGAACCACAAACCCAATGTATAAAATTAGG...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTCTTGCCTTAATCTCATaGGACCTACATACTAAAGAG +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFLALIS*DLHTKE
Trigger: CTCTTTAGTATGTAGGTCCCATGAGATTAAGGCAAG...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTCCAATTATAGTACAATaGAAGCCAAGAGGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILPIIVQ*KPRGEK
Trigger: TTTTTCCCCTCTTGGCTTCCATTGTACTATAATTGG...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR TCA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATATTTCTCCATTGGGTTaGTCAGCTCTTCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHISPLG*SALHFH
Trigger: ATGAAAATGAAGAGCTGATCAACCCAATGGAGAAAT...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR TCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTATTCCATTCCAGTTTTaGGACTATACTCCTAGTATG +
Preference number: 4 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFIPFQF*DYTPSM
Trigger: CATACTAGGAGTATAGTCTCAAAACTGGAATGGAAT...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR GCA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTAAACTGGCAAGTTACTaGAATAATCCAGGTAATATG +
Preference number: 4 (lower is better)
Translates to: PSYAPIFPSTTITTYIILKLASY*NNPGNM
Trigger: CATATTACCTGGATTATTGCAGTAACTTGCCAGTTT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTTGTAACTTGTATCCGTaGAAATGTTACCTGGGAATT +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFCNLYP*KCYLGI
Trigger: AATTCCCAGGTAACATTTCCACGGATACAAGTTACA...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR GCA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTACACTGTTTTGTTGTTaGAAGGATATAATCCGTTCT +
Preference number: 4 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFTLFCC*KDIIRS
Trigger: AGAACGGATTATATCCTTGCAACAACAAAACAGTGT...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CCA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTTCAGAACAAAGAAACTaGCAAGTTACTGCAATAATC +
Preference number: 4 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFSEQRN*QVTAII
Trigger: GATTATTGCAGTAACTTGCCAGTTTCTTTGTTCTGA...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS CCA 90 bp GCGCTGGGGGCGAAGGGTGCGGTGAGGGAGGCGAACGCGCCGCCATaGCTGCGGCTGCTAACGGGTCAAGTTCCCTGTTGGAAACTCCAC +
Preference number: 5 (lower is better)
Translates to: ALGAKGAVREANAPP*LRLLTGQVPCWKLH
Trigger: GTGGAGTTTCCAACAGGGAACTTGACCCGTTAGCAGCCGCAGCCATGGCGGCGCGTTCGCCTCCCTCACCGCACCCTTCGCCCCCAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS CCA 90 bp AACGCGCCGCCATGGCTGCGGCTGCTAACGGGTCAAGTTCCCTGTTaGAAACTCCACCTCCCTTTCCCCAACCCGGCGAGCCCGGAACGC +
Preference number: 5 (lower is better)
Translates to: NAPPWLRLLTGQVPC*KLHLPFPNPASPER
Trigger: GCGTTCCGGGCTCGCCGGGTTGGGGAAAGGGAGGTGGAGTTTCCAACAGGGAACTTGACCCGTTAGCAGCCGCAGCCATGGCGGCGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS GCA 90 bp ACCCACCCAGATTTTATCACTTTCGTCCGCGACCACCTCCCGCGCTaGGCCGGCAAAACCCGAGGCCTCGCTGCGCATTGCGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: THPDFITFVRDHLPR*AGKTRGLAAHCVYF
Trigger: GAAGTACACGCAATGCGCAGCGAGGCCTCGGGTTTTGCCGGCGCAGCGCGGGAGGTGGTCGCGGACGAAAGTGATAAAATCTGGGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380641.4
ENST00000380647.8
ENST00000484374.1
CDS CCA 90 bp AATCTTGTCAGACTGCTTTATACTGCCCCAGAAGGAAGAGGACAATaGAGTACCTACACACTTGCCAGGGAGCCCCTCTCTGTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: NLVRLLYTAPEGRGQ*STYTLAREPLSVSF
Trigger: AAAACTCACAGAGAGGGGCTCCCTGGCAAGTGTGTAGGTACTCCATTGTCCTCTTCCTTCTGGGGCAGTATAAAGCAGTCTGACAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS-3UTR CAA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTAGGCCTCGCTGCGCATaGCGTGTACTTCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: ALICGNICIRPSDATLFPRPRCA*RVLQLP
Trigger: GGGGAGCTGAAGTACACGCAATGCGCAGCGAGGCCT...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTAGGCCTCGCTGCGCATaGCGTGTACTTCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: PSYAPIFPSTTITTYIILRPRCA*RVLQLP
Trigger: GGGGAGCTGAAGTACACGCAATGCGCAGCGAGGCCT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGCTGGATCAGCTCTGCTaGCTGGGCTGTATGTGTACT +
Preference number: 5 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQLDQLC*LGCMCT
Trigger: AGTACACATACAGCCCAGCAAGCAGAGCTGATCCAG...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS GCA 90 bp TGGGTTGATCAGCTCTTCATTTTCATTTCTCAATGCATTAGCTTCTaGCACTTGTCTCCTCAGGGAAGTGACTTCTGTCTCCAGCTCACT +
Preference number: 5 (lower is better)
Translates to: WVDQLFIFISQCISF*HLSPQGSDFCLQLT
Trigger: AGTGAGCTGGAGACAGAAGTCACTTCCCTGAGGAGACAAGTGGCAGAAGCTAATGCATTGAGAAATGAAAATGAAGAGCTGATCAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CCA 90 bp TCTAAATCTGACCGTGAAATGTTCAGGATAGAAGCTGCCAAGGTCTaGGCTTTATGGGTTGAGGTTTTACAGGCGTCCCTGTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SKSDREMFRIEAAKV*ALWVEVLQASLFFF
Trigger: GAAGAAAAACAGGGACGCCTGTAAAACCTCAACCCATAAAGCCCAGACCTTGGCAGCTTCTATCCTGAACATTTCACGGTCAGATTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS GCA 90 bp ATTCCACACAGCGTCAGAATCTTCTTGTCGAAGTTGTTGGGGATCTaGTCTCTTTATTTTCCTGATTTCAGTCATGCCACTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: IPHSVRIFLSKLLGI*SLYFPDFSHATAFF
Trigger: GAAGAAGGCAGTGGCATGACTGAAATCAGGAAAATAAAGAGAGCAGATCCCCAACAACTTCGACAAGAAGATTCTGACGCTGTGTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CCA 90 bp CTCACTTTCATGGTGGCCATCTCGGATTTAGCTCTGTCTGCTGACTaGTGTGATTTCTCCATTGGGTTGATCAGCTCTTCATTTTCATTT +
Preference number: 5 (lower is better)
Translates to: LTFMVAISDLALSAD*CDFSIGLISSSFSF
Trigger: AAATGAAAATGAAGAGCTGATCAACCCAATGGAGAAATCACACCAGTCAGCAGACAGAGCTAAATCCGAGATGGCCACCATGAAAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTCTGGATCAGCTCTGCTaGCTGGGCTGTATGTGTACT +
Preference number: 5 (lower is better)
Translates to: ALICGNICIRPSDATLFPLDQLC*LGCMCT
Trigger: AGTACACATACAGCCCAGCAAGCAGAGCTGATCCAG...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGAGCGTCAGAATCTTCTaGTCGAAGTTGTTGGGGATC +
Preference number: 5 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMSVRIF*SKLLGI
Trigger: GATCCCCAACAACTTCGACAAGAAGATTCTGACGCT...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTTCGTTGATCGGATACTaGCTGTTGATGGAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFSLIGY*LLMEEL
Trigger: AAGCTCCTCCATCAACAGCAAGTATCCGATCAACGA...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TGGAGCAGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATATTATTGTCTGCCTGCTaGTCTGAAATCGTTGATCGG +
Preference number: 5 (lower is better)
Translates to: WSRYRVRIAMHVFQSHHILLSAC*SEIVDR
Trigger: CCGATCAACGATTTCAGACAAGCAGGCAGACAATAA...TATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCTGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp ACTTTACAGGACATGGAGACTGGGGAGGACCACAAAGAAATTAAAAAGGGACAGCTATCATCTAGGTCCTaGGGAAAACACAAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: TLQDMETGEDHKEIKKGQLSSRS*GKHKGN
Trigger: GTTGCCTTTGTGTTTTCCCAAGGACCTAGATGATAG...CTGTCCCTTTTTAATTTCTTTGTGGTCCTCCCCAGTCTCCATGTCCTGTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS TCA 90 bp AACGTTTCACAGGTGGTTCCTTATGTTTTCCTTCAGCACTTGTCATaGTGCTCTTTCGGGAGAAACCCTTGTTGGCAGATATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: NVSQVVPYVFLQHLS*CSFGRNPCWQICFL
Trigger: CAGAAAACATATCTGCCAACAAGGGTTTCTCCCGAAAGAGCATCATGACAAGTGCTGAAGGAAAACATAAGGAACCACCTGTGAAACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTAACCAAACTGACCACTaGTGTGAGATCTGGGTTTGT +
Preference number: 5 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFNQTDH*CEIWVC
Trigger: ACAAACCCAGATCTCACACAAGTGGTCAGTTTGGTT...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTATTAGCTTCTGCCACTaGTCTCCTCAGGGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: ALICGNICIRPSDATLFPISFCH*SPQGSD
Trigger: GTCACTTCCCTGAGGAGACAAGTGGCAGAAGCTAAT...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CCA 90 bp CTGTTTTTCTCTTTCCACAACCAAACTGACCACTTGTGTGAGATCTaGGTTTGTAACCTGGAGACGTTTCCACAAAGACCATACAAATTC +
Preference number: 5 (lower is better)
Translates to: LFFSFHNQTDHLCEI*VCNLETFPQRPYKF
Trigger: GAATTTGTATGGTCTTTGTGGAAACGTCTCCAGGTTACAAACCCAGATCTCACACAAGTGGTCAGTTTGGTTGTGGAAAGAGAAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380641.4
ENST00000380647.8
CDS-3UTR CAA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTCGGGAGAAACCCTTGTaGGCAGATATGTTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSREKPL*ADMFSD
Trigger: GTCAGAAAACATATCTGCCAACAAGGGTTTCTCCCG...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGTTTCGGGAGAAACCCTaGTTGGCAGATATGTTTTCT +
Preference number: 5 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMFREKP*LADMFS
Trigger: AGAAAACATATCTGCCAACAAGGGTTTCTCCCGAAA...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACATTGGGGACAAAGACCTaGAACGTTTCACAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SISYINQHINENRFNWTTLGTKT*NVSQVV
Trigger: AACCACCTGTGAAACGTTCAAGGTCTTTGTCCCCAA...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAATCTGTAGCCGTTCCTaGCGTTTTTCATGGGCATCT +
Preference number: 5 (lower is better)
Translates to: ILYLLILQICCSLDHLWPICSRS*RFSWAS
Trigger: AGATGCCCATGAAAAACGCAAGGAACGGCTACAGAT...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATTCTGGGCTTTATGGGTaGAGGTTTTACAGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHSGLYG*RFYRRP
Trigger: GGGACGCCTGTAAAACCTCAACCCATAAAGCCCAGA...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACTCTTTATCCTTAGTCTaGGAACAGGCCCCCAGTTAT +
Preference number: 5 (lower is better)
Translates to: YNFKVRINLSISEAPYSHSLSLV*EQAPSY
Trigger: ATAACTGGGGGCCTGTTCCAAGACTAAGGATAAAGA...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGATCTTCTTGTCGAAGTaGTTGGGGATCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLIFLSK*LGICSL
Trigger: AAGAGAGCAGATCCCCAACAACTTCGACAAGAAGAT...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTGATTTCTCCATTGGGTaGATCAGCTCTTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFDFSIG*ISSSFS
Trigger: TGAAAATGAAGAGCTGATCAACCCAATGGAGAAATC...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTAGGTTCTCAAACACATaGCTCATAACCTTGATGGAA +
Preference number: 5 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFRFSNT*LITLME
Trigger: TTCCATCAAGGTTATGAGCAATGTGTTTGAGAACCT...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACAGCTTGTCTGAAATCGTaGATCGGATACTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SISYINQHINENRFNWTTACLKS*IGYLLL
Trigger: CAACAGCAAGTATCCGATCAACGATTTCAGACAAGC...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp GTATTGAACCTGACTATTGATAGTTGGAGCAGATACCGTGTCAGGATTGCAATGTCATTTTGCAACTCTTaGGCCAAAGCCTTCACAAAT +
Preference number: 5 (lower is better)
Translates to: VLNLTIDSWSRYRVRIAMSFCNS*AKAFTN
Trigger: ATTTGTGAAGGCTTTGGCCAAAGAGTTGCAAAATGA...CATTGCAATCCTGACACGGTATCTGCTCCAACTATCAATAGTCAGGTTCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTCACATGGACATCATTTaGCAACTCTTTGGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: ALICGNICIRPSDATLFPHMDII*QLFGQS
Trigger: GCTTTGGCCAAAGAGTTGCAAAATGATGTCCATGTG...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACAAAATGTTCACAGTATTaGCCTCTGGGAGATGGAATT +
Preference number: 5 (lower is better)
Translates to: QAEEFHSSFETILLVCFTKCSQY*PLGDGI
Trigger: AATTCCATCTCCCAGAGGCAAATACTGTGAACATTT...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp CAGGCCGAGGAATTCCATTCCAGTTTTGAGACTATACTCCTAGTATGTTTCACATCTCTGTTCAAATTCTaGTATTTTGGCATCCTTGAC +
Preference number: 5 (lower is better)
Translates to: QAEEFHSSFETILLVCFTSLFKF*YFGILD
Trigger: GTCAAGGATGCCAAAATACAAGAATTTGAACAGAGA...TGTGAAACATACTAGGAGTATAGTCTCAAAACTGGAATGGAATTCCTCGGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACATTCTTGTCGAAGTTGTaGGGGATCTGCTCTCTTTAT +
Preference number: 5 (lower is better)
Translates to: SISYINQHINENRFNWTTFLSKL*GICSLY
Trigger: ATAAAGAGAGCAGATCCCCAACAACTTCGACAAGAA...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATTCTGGAGTACTCCTCTaGACCTCATCATCTTCACCA +
Preference number: 5 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHSGVLL*TSSSSP
Trigger: TGGTGAAGATGATGAGGTCAAGAGGAGTACTCCAGA...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp AGATACCGTGTCAGGATTGCAATGCATGTATTCCAATCACACCACATAAAAAGTAATTGTTCCCAAAGTTaGAGAGGTCTGTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RYRVRIAMHVFQSHHIKSNCSQS*RGLCFR
Trigger: TCTGAAGCACAGACCTCTCAAACTTTGGGAACAATT...ACTTTTTATGTGGTGTGATTGGAATACATGCATTGCAATCCTGACACGGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTATAGCAGTTTTTACACTGTTTTGTTGTaGCAAGGATATAATCCGTTC +
Preference number: 5 (lower is better)
Translates to: HTTNLLLPGPLMAIYSSFYTVLL*QGYNPF
Trigger: GAACGGATTATATCCTTGCAACAACAAAACAGTGTA...AAAACTGCTATAGATGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGGATACCGTGTCAGGATaGCAATGCATGTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLDTVSG*QCMYSN
Trigger: ATTGGAATACATGCATTGCAATCCTGACACGGTATC...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACAAATCCTGGAAAATATaGATCCTAAAGCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: YNFKVRINLSISEAPYSHKSWKI*ILKPSS
Trigger: TGAGGAGGGCTTTAGGATCAATATTTTCCAGGATTT...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTACTGTATCTTCCTGCTaGCTATCATCTAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PSYAPIFPSTTITTYIILTVSSC*LSSRSL
Trigger: CAAGGACCTAGATGATAGCAAGCAGGAAGATACAGT...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTAACCAAACTGACCACTaGTGTGAGATCTGGGTTTGT +
Preference number: 5 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFNQTDH*CEIWVC
Trigger: ACAAACCCAGATCTCACACAAGTGGTCAGTTTGGTT...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACTGTATTTTGGCATCCTaGACTTGCAGAATTTCTAGA +
Preference number: 5 (lower is better)
Translates to: YNFKVRINLSISEAPYSHCILAS*TCRISR
Trigger: TCTAGAAATTCTGCAAGTCAAGGATGCCAAAATACA...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp AGGTACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCTCAAATTCTTGTATTTaGGCATCCTTGACTTGCAGA +
Preference number: 5 (lower is better)
Translates to: RYNFKVRINLSISEAPYSSNSCI*ASLTCR
Trigger: TCTGCAAGTCAAGGATGCCAAAATACAAGAATTTGA...GGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGAAGATTAGTAACACTTaGCCGGAGCATAGCTTCATT +
Preference number: 5 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLKISNT*PEHSFI
Trigger: AATGAAGCTATGCTCCGGCAAAGTGTTACTAATCTT...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATTGTACTTTTCTCTGTaGACTCTAGTAGGAACTGCT +
Preference number: 5 (lower is better)
Translates to: ILYLLILQICCSLDHLWPLYFSL*TLVGTA
Trigger: AGCAGTTCCTACTAGAGTCAACAGAGAAAAGTACAA...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACTTTAAGCTCTCTTATTaGTCGCCTTACCACATGGAC +
Preference number: 5 (lower is better)
Translates to: RVVEIHSISYINQHINENFKLSY*SPYHMD
Trigger: GTCCATGTGGTAAGGCGACAAATAAGAGAGCTTAAA...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCATACTACAAATCTGTaGCTCCCTGGACCACTTATG +
Preference number: 5 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHHTTNL*LPGPLM
Trigger: CATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATG...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TACAATTTCAAAGTGAGAATCAACTTAAGTATCAGTGAAGCCCCCTACTCCCACCAAAGGAAATGCTCATaGGAGCATTTCAGATTTCAA +
Preference number: 5 (lower is better)
Translates to: YNFKVRINLSISEAPYSHQRKCS*EHFRFQ
Trigger: TTGAAATCTGAAATGCTCCAATGAGCATTTCCTTTG...GTGGGAGTAGGGGGCTTCACTGATACTTAAGTTGATTCTCACTTTGAAATTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp AGTATCTCCTACATAAACCAGCACATCAATGAGAACAGATTCAATTGGACCACATCAAATTCTTGTATTTaGGCATCCTTGACTTGCAGA +
Preference number: 5 (lower is better)
Translates to: SISYINQHINENRFNWTTSNSCI*ASLTCR
Trigger: TCTGCAAGTCAAGGATGCCAAAATACAAGAATTTGA...TGTGGTCCAATTGAATCTGTTCTCATTGATGTGCTGGTTTATGTAGGAGATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCATCTCTGTTCAAATTCTaGTATTTTGGCATCCTTGAC +
Preference number: 5 (lower is better)
Translates to: ILYLLILQICCSLDHLWPSLFKF*YFGILD
Trigger: GTCAAGGATGCCAAAATACAAGAATTTGAACAGAGA...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATTTAACGTTTCTAAGCTaGATAAGGATGGGCGATGAG +
Preference number: 5 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHLTFLS*IRMGDE
Trigger: CTCATCGCCCATCCTTATCAAGCTTAGAAACGTTAA...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp TTAGTTGATACTTTTTCTTCTTATGCTCAGGCCAATTTGTGTGTACCAAGCCTGAAGTACACTGTTTTGTaGTTGCAAGGATATAATCCG +
Preference number: 5 (lower is better)
Translates to: LVDTFSSYAQANLCVPSLKYTVL*LQGYNP
Trigger: CGGATTATATCCTTGCAACAACAAAACAGTGTACTT...CAGGCTTGGTACACACAAATTGGCCTGAGCATAAGAAGAAAAAGTATCAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp ACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTTATCGGATACTTGCTGTaGATGGAGGAGCTTTTCATT +
Preference number: 5 (lower is better)
Translates to: TDLWQYLYSTIRCYTISFIGYLL*MEELFI
Trigger: AATGAAAAGCTCCTCCATCAACAGCAAGTATCCGAT...AAAGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp ATTTTATATTTGCTCATACTACAAATCTGTTGCTCCCTGGACCACTTATGGCCAAATTTAGCTTCTTTATaGTCTGCCTGCTTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: ILYLLILQICCSLDHLWPNLASL*SACLSE
Trigger: TTCAGACAAGCAGGCAGACAATAAAGAAGCTAAATT...TGGCCATAAGTGGTCCAGGGAGCAACAGATTTGTAGTATGAGCAAATATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp GCACTGATTTGTGGCAATATTTGTATTCGACCATCAGATGCTACACTATTTCCTTCTTCTACTTTTTCATaGGCTAACAGCAATGTCTTC +
Preference number: 5 (lower is better)
Translates to: ALICGNICIRPSDATLFPSSTFS*ANSNVF
Trigger: GAAGACATTGCTGTTAGCCAATGAAAAAGTAGAAGA...AGGAAATAGTGTAGCATCTGATGGTCGAATACAAATATTGCCACAAATCAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp AGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCAATGAGAACGATTTGTGGCAATATTaGTATTCGACCATCAGATGC +
Preference number: 5 (lower is better)
Translates to: RVVEIHSISYINQHINENDLWQY*YSTIRC
Trigger: GCATCTGATGGTCGAATACAAATATTGCCACAAATC...GTTCTCATTGATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CCCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTTGACTCACAAAGTTTaGGCAATAATATCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: PSYAPIFPSTTITTYIILLTHKV*AIISWH
Trigger: GTGCCAGGATATTATTGCCAAAACTTTGTGAGTCAA...AAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS-3UTR CAA 90 bp TTTTTGCCAAAGAGTTGTAGAAATACACAGTATCTCCTACATAAACCAGCACATCATGAAAATAGTCCTTaGGGGTCTTGCCATCTATAT +
Preference number: 5 (lower is better)
Translates to: FLPKSCRNTQYLLHKPAHHENSP*GSCHLY
Trigger: ATATAGATGGCAAGACCCCAAAGGACTATTTTCATG...ATGTGCTGGTTTATGTAGGAGATACTGTGTATTTCTACAACTCTTTGGCAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS-3UTR CAA 90 bp CCAGTTATGCTCCCATATTTCCCTCTACTACTATTACAACATACATCATTCTTTACCTGCAGTGTAACTTaGAAAGTCAAGGTGATTAGA +
Preference number: 5 (lower is better)
Translates to: PVMLPYFPLLLLQHTSFFTCSVT*KVKVIR
Trigger: TCTAATCACCTTGACTTTCAAAGTTACACTGCAGGT...AAAGAATGATGTATGTTGTAATAGTAGTAGAGGGAAATATGGGAGCATAACTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380641.4
CDS CAA 72 bp GCGCTGCGCCGGCAAAACCCGAGGCCTCGCTGCGCATaGCGTGTACTTCAGCTCCCCGCCCAACACGTGGGG +
Preference number: 6 (lower is better)
Translates to: ALRRQNPRPRCA*RVLQLPAQHVG
Trigger: CCCCACGTGTTGGGCGGGGAGCTGAAGTACACGCAATGCGCAGCGAGGCCTCGGGTTTTGCCGGCGCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380641.4
ENST00000380647.8
ENST00000484374.1
CDS CCA 72 bp GCGAAGGGTGCGGTGAGGGAGGCGAACGCGCCGCCATaGCTGCGGCTGCTAACGGGTCAAGTTCCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: AKGAVREANAPP*LRLLTGQVPCW
Trigger: CCAACAGGGAACTTGACCCGTTAGCAGCCGCAGCCATGGCGGCGCGTTCGCCTCCCTCACCGCACCCTTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS CAA 90 bp GAACGCGCCGCCATGGCTGCGGCTGCTAACGGGTCAAGTTCCCTGTaGGAAACTCCACCTCCCTTTCCCCAACCCGGCGAGCCCGGAACG +
Preference number: 6 (lower is better)
Translates to: ERAAMAAAANGSSSL*ETPPPFPQPGEPGT
Trigger: CGTTCCGGGCTCGCCGGGTTGGGGAAAGGGAGGTGGAGTTTCCAACAGGGAACTTGACCCGTTAGCAGCCGCAGCCATGGCGGCGCGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS GCA 72 bp GATTTTATCACTTTCGTCCGCGACCACCTCCCGCGCTaGGCCGGCAAAACCCGAGGCCTCGCTGCGCATTGC +
Preference number: 6 (lower is better)
Translates to: DFITFVRDHLPR*AGKTRGLAAHC
Trigger: GCAATGCGCAGCGAGGCCTCGGGTTTTGCCGGCGCAGCGCGGGAGGTGGTCGCGGACGAAAGTGATAAAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380641.4
ENST00000380647.8
ENST00000484374.1
CDS CCA 72 bp CCATGGCTGCGGCTGCTAACGGGTCAAGTTCCCTGTTaGAAACTCCACCTCCCTTTCCCCAACCCGGCGAGC +
Preference number: 6 (lower is better)
Translates to: PWLRLLTGQVPC*KLHLPFPNPAS
Trigger: GCTCGCCGGGTTGGGGAAAGGGAGGTGGAGTTTCCAACAGGGAACTTGACCCGTTAGCAGCCGCAGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS GCA 72 bp CCTCAGGGTACACTACCCCAGCACTTCTGGGGGCTGTaGCGTCTGACCAGTGTTTACATGGCAGGTGTAAAT +
Preference number: 6 (lower is better)
Translates to: PQGTLPQHFWGL*RLTSVYMAGVN
Trigger: ATTTACACCTGCCATGTAAACACTGGTCAGACGGCACAGCCCCCAGAAGTGCTGGGGTAGTGTACCCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS GCA 72 bp CCCAGAAGGAAGAGGACAATGGAGTACCTACACACTTaGCAGGGAGCCCCTCTCTGTGAGTTTTCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: PRRKRTMEYLHT*QGAPLCEFSSG
Trigger: CCCTGAGGAAAACTCACAGAGAGGGGCTCCCTGGCAAGTGTGTAGGTACTCCATTGTCCTCTTCCTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS CCA 72 bp AGCTTCACATGGCCAATACGCATGGCCAGAGCTGCATaGAGAAAGCTGGTCTGGTCTTTATTGTCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SFTWPIRMARAA*RKLVWSLLSAC
Trigger: GCAGGCAGACAATAAAGACCAGACCAGCTTTCTCCATGCAGCTCTGGCCATGCGTATTGGCCATGTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461247.1
CDS CCA 72 bp AGACTGCTTTATACTGCCCCAGAAGGAAGAGGACAATaGAGTACCTACACACTTGCCAGGGAGCCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: RLLYTAPEGRGQ*STYTLAREPLS
Trigger: AGAGAGGGGCTCCCTGGCAAGTGTGTAGGTACTCCATTGTCCTCTTCCTTCTGGGGCAGTATAAAGCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS CCA 72 bp GACCGTGAAATGTTCAGGATAGAAGCTGCCAAGGTCTaGGCTTTATGGGTTGAGGTTTTACAGGCGTCCCTG +
Preference number: 6 (lower is better)
Translates to: DREMFRIEAAKV*ALWVEVLQASL
Trigger: CAGGGACGCCTGTAAAACCTCAACCCATAAAGCCCAGACCTTGGCAGCTTCTATCCTGAACATTTCACGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 72 bp TCACTGCTGCTTTCACTCACATCCTCCCAGCCGTCCTaGCTGAGGTTCTCAAACACATTGCTCATAACCTTG +
Preference number: 6 (lower is better)
Translates to: SLLLSLTSSQPS*LRFSNTLLITL
Trigger: CAAGGTTATGAGCAATGTGTTTGAGAACCTCAGCAAGGACGGCTGGGAGGATGTGAGTGAAAGCAGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CCA 72 bp ATGGTGGCCATCTCGGATTTAGCTCTGTCTGCTGACTaGTGTGATTTCTCCATTGGGTTGATCAGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: MVAISDLALSAD*CDFSIGLISSS
Trigger: TGAAGAGCTGATCAACCCAATGGAGAAATCACACCAGTCAGCAGACAGAGCTAAATCCGAGATGGCCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CCA 72 bp CCAAATCCAAATTTAGCTTCACATGGCCAATACGCATaGCCAGAGCTGCATGGAGAAAGCTGGTCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: PNPNLASHGQYA*PELHGESWSGL
Trigger: AAGACCAGACCAGCTTTCTCCATGCAGCTCTGGCCATGCGTATTGGCCATGTGAAGCTAAATTTGGATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461247.1
CDS CCA 72 bp ATGTTCAGGATAGAAGCTGCCAAGGTCTGGGCTTTATaGGTTGAGGTTTTACAGGCGTCCCTGTTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: MFRIEAAKVWAL*VEVLQASLFFF
Trigger: GAAGAAAAACAGGGACGCCTGTAAAACCTCAACCCATAAAGCCCAGACCTTGGCAGCTTCTATCCTGAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CCA 72 bp CCTTTCCACAACCAAACTGACCACTTGTGTGAGATCTaGGTTTGTAACCTGGAGACGTTTCCACAAAGACCA +
Preference number: 6 (lower is better)
Translates to: PFHNQTDHLCEI*VCNLETFPQRP
Trigger: TGGTCTTTGTGGAAACGTCTCCAGGTTACAAACCCAGATCTCACACAAGTGGTCAGTTTGGTTGTGGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS CAA 90 bp TTGTGTGTCCATATTGAGAACCTGAAGCTGCTGGATCAGCTCTGCTaGCTGGGCTGTATGTGTACTGTTCTGTTTGTAAAGATTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LCVHIENLKLLDQLC*LGCMCTVLFVKILQ
Trigger: CTGCAGAATCTTTACAAACAGAACAGTACACATACAGCCCAGCAAGCAGAGCTGATCCAGCAGCTTCAGGTTCTCAATATGGACACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380641.4
ENST00000380647.8
CDS TCA 72 bp CAGGTGGTTCCTTATGTTTTCCTTCAGCACTTGTCATaGTGCTCTTTCGGGAGAAACCCTTGTTGGCAGATA +
Preference number: 6 (lower is better)
Translates to: QVVPYVFLQHLS*CSFGRNPCWQI
Trigger: TATCTGCCAACAAGGGTTTCTCCCGAAAGAGCATCATGACAAGTGCTGAAGGAAAACATAAGGAACCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS TCA 72 bp CAGGATAGAAGCTGCCAAGGTCTGGGCTTTATGGGTTaGGGTTTTACAGGCGTCCCTGTTTTTCTTCATTTT +
Preference number: 6 (lower is better)
Translates to: QDRSCQGLGFMG*GFTGVPVFLHF
Trigger: AAAATGAAGAAAAACAGGGACGCCTGTAAAACCTCAACCCATAAAGCCCAGACCTTGGCAGCTTCTATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS GCA 72 bp GCTTCCTCAATTTCTCCAGGTCATTTAGCAGGTCAGTaGAGCGGGTACTTAATTTCTTGTTTTCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: ASSISPGHLAGQ*SGYLISCFPPP
Trigger: TGGAGGAGGAAAACAAGAAATTAAGTACCCGCTGCACTGACCTGCTAAATGACCTGGAGAAATTGAGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380641.4
ENST00000380647.8
CDS GCA 72 bp GCATGGAGAAAGCTGGTCTGGTCTTTATTGTCTGCCTaGTTGTCTGAAATCGTTGATCGGATACTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: AWRKLVWSLLSA*LSEIVDRILAV
Trigger: AACAGCAAGTATCCGATCAACGATTTCAGACAAGCAGGCAGACAATAAAGACCAGACCAGCTTTCTCCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461247.1
CDS CCA 72 bp TCTTTCCACAACCAAACTGACCACTTGTGTGAGATCTaGGTTTGTAACCTGGAGACGTTTCCACAAAGACCA +
Preference number: 6 (lower is better)
Translates to: SFHNQTDHLCEI*VCNLETFPQRP
Trigger: TGGTCTTTGTGGAAACGTCTCCAGGTTACAAACCCAGATCTCACACAAGTGGTCAGTTTGGTTGTGGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380641.4
ENST00000380647.8
CDS GCA 72 bp CAGCTCTTCATTTTCATTTCTCAATGCATTAGCTTCTaGCACTTGTCTCCTCAGGGAAGTGACTTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: QLFIFISQCISF*HLSPQGSDFCL
Trigger: GAGACAGAAGTCACTTCCCTGAGGAGACAAGTGGCAGAAGCTAATGCATTGAGAAATGAAAATGAAGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS GCA 72 bp TTTTCCCAGAGTCTGACATGTGTAATCTTGTCAGACTaGTTTATACTGCCCCAGAAGGAAGAGGACAATGGA +
Preference number: 6 (lower is better)
Translates to: FSQSLTCVILSD*FILPQKEEDNG
Trigger: TCCATTGTCCTCTTCCTTCTGGGGCAGTATAAAGCAGTCTGACAAGATTACACATGTCAGACTCTGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS CAA 72 bp TTCATTTTCATTTCTCAATGCATTAGCTTCTGCCACTaGTCTCCTCAGGGAAGTGACTTCTGTCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: FIFISQCISFCH*SPQGSDFCLQL
Trigger: GAGCTGGAGACAGAAGTCACTTCCCTGAGGAGACAAGTGGCAGAAGCTAATGCATTGAGAAATGAAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 72 bp TCTGGTCTTTATTGTCTGCCTGCTTGTCTGAAATCGTaGATCGGATACTTGCTGTTGATGGAGGAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: SGLYCLPACLKS*IGYLLLMEELF
Trigger: GAAAAGCTCCTCCATCAACAGCAAGTATCCGATCAACGATTTCAGACAAGCAGGCAGACAATAAAGACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461247.1
CDS CAA 72 bp TGGAGAAAGCTGGTCTGGTCTTTATTGTCTGCCTGCTaGTCTGAAATCGTTGATCGGATACTTGCTGTTGAT +
Preference number: 6 (lower is better)
Translates to: WRKLVWSLLSAC*SEIVDRILAVD
Trigger: ATCAACAGCAAGTATCCGATCAACGATTTCAGACAAGCAGGCAGACAATAAAGACCAGACCAGCTTTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461247.1
CDS CAA 90 bp GATCAGCTCTTCATTTTCATTTCTCAATGCATTAGCTTCTGCCACTaGTCTCCTCAGGGAAGTGACTTCTGTCTCCAGCTCACTGATTTT +
Preference number: 6 (lower is better)
Translates to: DQLFIFISQCISFCH*SPQGSDFCLQLTDF
Trigger: AAAATCAGTGAGCTGGAGACAGAAGTCACTTCCCTGAGGAGACAAGTGGCAGAAGCTAATGCATTGAGAAATGAAAATGAAGAGCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 90 bp TTGGCCAAAGCCTTCACAAATGTGGTGAACTCTTCTACTTTTTCATaGGCTAACAGCAATGTCTTCTGTGCACCTTCTAGGACCTGTTCA +
Preference number: 6 (lower is better)
Translates to: LAKAFTNVVNSSTFS*ANSNVFCAPSRTCS
Trigger: TGAACAGGTCCTAGAAGGTGCACAGAAGACATTGCTGTTAGCCAATGAAAAAGTAGAAGAGTTCACCACATTTGTGAAGGCTTTGGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 90 bp GAAAGCTGGTCTGGTCTTTATTGTCTGCCTGCTTGTCTGAAATCGTaGATCGGATACTTGCTGTTGATGGAGGAGCTTTTCATTAACTTC +
Preference number: 6 (lower is better)
Translates to: ESWSGLYCLPACLKS*IGYLLLMEELFINF
Trigger: GAAGTTAATGAAAAGCTCCTCCATCAACAGCAAGTATCCGATCAACGATTTCAGACAAGCAGGCAGACAATAAAGACCAGACCAGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461247.1
CDS GCA 72 bp AGCGTCAGAATCTTCTTGTCGAAGTTGTTGGGGATCTaGTCTCTTTATTTTCCTGATTTCAGTCATGCCACT +
Preference number: 6 (lower is better)
Translates to: SVRIFLSKLLGI*SLYFPDFSHAT
Trigger: AGTGGCATGACTGAAATCAGGAAAATAAAGAGAGCAGATCCCCAACAACTTCGACAAGAAGATTCTGACGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CCA 72 bp TTCCACACAGCGTCAGAATCTTCTTGTCGAAGTTGTTaGGGATCTGCTCTCTTTATTTTCCTGATTTCAGTC +
Preference number: 6 (lower is better)
Translates to: FHTASESSCRSC*GSALFIFLISV
Trigger: GACTGAAATCAGGAAAATAAAGAGAGCAGATCCCCAACAACTTCGACAAGAAGATTCTGACGCTGTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 72 bp TTTCAGACTTCTGTGAAACCATTAACGTTTCTAAGCTaGATAAGGATGGGCGATGAGGTACCTGTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: FQTSVKPLTFLS*IRMGDEVPVLS
Trigger: ACTCAGCACAGGTACCTCATCGCCCATCCTTATCAAGCTTAGAAACGTTAATGGTTTCACAGAAGTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 72 bp GCCTTCACAAATGTGGTGAACTCTTCTACTTTTTCATaGGCTAACAGCAATGTCTTCTGTGCACCTTCTAGG +
Preference number: 6 (lower is better)
Translates to: AFTNVVNSSTFS*ANSNVFCAPSR
Trigger: CCTAGAAGGTGCACAGAAGACATTGCTGTTAGCCAATGAAAAAGTAGAAGAGTTCACCACATTTGTGAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 72 bp ATTCCACACAGCGTCAGAATCTTCTTGTCGAAGTTGTaGGGGATCTGCTCTCTTTATTTTCCTGATTTCAGT +
Preference number: 6 (lower is better)
Translates to: IPHSVRIFLSKL*GICSLYFPDFS
Trigger: ACTGAAATCAGGAAAATAAAGAGAGCAGATCCCCAACAACTTCGACAAGAAGATTCTGACGCTGTGTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 72 bp TGTCTGCCTGCTTGTCTGAAATCGTTGATCGGATACTaGCTGTTGATGGAGGAGCTTTTCATTAACTTCTTT +
Preference number: 6 (lower is better)
Translates to: CLPACLKSLIGY*LLMEELFINFF
Trigger: AAAGAAGTTAATGAAAAGCTCCTCCATCAACAGCAAGTATCCGATCAACGATTTCAGACAAGCAGGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380647.8
ENST00000461247.1
CDS CAA 90 bp AATACTCAATTTCAGACTTCTGTGAAACCATTAACGTTTCTAAGCTaGATAAGGATGGGCGATGAGGTACCTGTGCTGAGTAGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: NTQFQTSVKPLTFLS*IRMGDEVPVLSSLD
Trigger: ATCCAGACTACTCAGCACAGGTACCTCATCGCCCATCCTTATCAAGCTTAGAAACGTTAATGGTTTCACAGAAGTCTGAAATTGAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 90 bp AGGACTTATTTTCTGGGATGTTTCTACAATAATTGTTCCCAAAGTTaGAGAGGTCTGTGCTTCAGAATCACTGCTGCTTTCACTCACATC +
Preference number: 6 (lower is better)
Translates to: RTYFLGCFYNNCSQS*RGLCFRITAAFTHI
Trigger: GATGTGAGTGAAAGCAGCAGTGATTCTGAAGCACAGACCTCTCAAACTTTGGGAACAATTATTGTAGAAACATCCCAGAAAATAAGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CCA 72 bp AAACTGACCACTTGTGTGAGATCTGGGTTTGTAACCTaGAGACGTTTCCACAAAGACCATACAAATTCTTTA +
Preference number: 6 (lower is better)
Translates to: KLTTCVRSGFVT*RRFHKDHTNSL
Trigger: TAAAGAATTTGTATGGTCTTTGTGGAAACGTCTCCAGGTTACAAACCCAGATCTCACACAAGTGGTCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380641.4
ENST00000380647.8
ENST00000484374.1
CDS CAA 72 bp GTACTATTTCTTTTCCTTGTGTTTGGCTGTCTTCTGTaGGATCACTTTCTTTCTGGTCTTTTCCATCTTCCG +
Preference number: 6 (lower is better)
Translates to: VLFLFLVFGCLL*DHFLSGLFHLP
Trigger: CGGAAGATGGAAAAGACCAGAAAGAAAGTGATCCAACAGAAGACAGCCAAACACAAGGAAAAGAAATAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 72 bp TCATCCTTCTTAAAGAACTGCTGTAGTCCTGCTTCATaGAGAACTACTGCTACCAAGTCTTCTCAATCTTCT +
Preference number: 6 (lower is better)
Translates to: SSFLKNCCSPAS*RTTATKSSQSS
Trigger: AGAAGATTGAGAAGACTTGGTAGCAGTAGTTCTCAATGAAGCAGGACTACAGCAGTTCTTTAAGAAGGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS CAA 90 bp TTTTCAGAGTCATCCTTCTTAAAGAACTGCTGTAGTCCTGCTTCATaGAGAACTACTGCTACCAAGTCTTCTCAATCTTCTTTCATCTTC +
Preference number: 6 (lower is better)
Translates to: FSESSFLKNCCSPAS*RTTATKSSQSSFIF
Trigger: GAAGATGAAAGAAGATTGAGAAGACTTGGTAGCAGTAGTTCTCAATGAAGCAGGACTACAGCAGTTCTTTAAGAAGGATGACTCTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484374.1
CDS TCA 72 bp TATGAGGCAAAAGGAAGCTGTCCTTCAAGAAGTTTCTaGATGTACAACATCCATTCCTTGTCATTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: YEAKGSCPSRSF*MYNIHSLSFSA
Trigger: TGCTGAAAATGACAAGGAATGGATGTTGTACATTCAGAAACTTCTTGAAGGACAGCTTCCTTTTGCCTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 90 bp GGTCTTTATTGTCTGCCTGCTTGTCTGAAATCGTTGATCGGATACTaGCTGTTGATGGAGGAGCTTTTCATTAACTTCTTTATATTCTTT +
Preference number: 6 (lower is better)
Translates to: GLYCLPACLKSLIGY*LLMEELFINFFIFF
Trigger: AAAGAATATAAAGAAGTTAATGAAAAGCTCCTCCATCAACAGCAAGTATCCGATCAACGATTTCAGACAAGCAGGCAGACAATAAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461247.1
CDS CAA 90 bp CTTCTTTATTGTCTGCCTGCTTGTCTGAAATCGTTGATCGGATACTaGCTGTTGATGGAGGAGCTTTTCATTAACTTCTTTATATTCTTT +
Preference number: 6 (lower is better)
Translates to: LLYCLPACLKSLIGY*LLMEELFINFFIFF
Trigger: AAAGAATATAAAGAAGTTAATGAAAAGCTCCTCCATCAACAGCAAGTATCCGATCAACGATTTCAGACAAGCAGGCAGACAATAAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS TCA 72 bp TCTTTAACAGACAATTCTGCTGTTTTCTTGGCATTCTaGAGTACACTGTTTTGTTGTTGCAAGGATATAATC +
Preference number: 6 (lower is better)
Translates to: SLTDNSAVFLAF*STLFCCCKDII
Trigger: GATTATATCCTTGCAACAACAAAACAGTGTACTTCAGAATGCCAAGAAAACAGCAGAATTGTCTGTTAAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380647.8
ENST00000461247.1
CDS GCA 72 bp AGTTCATTAGTAGCATTCTTTAGTTTATACTGCAATTaGTTCATTTCCAAATCCATGCTCCTTGAAGGACTA +
Preference number: 6 (lower is better)
Translates to: SSLVAFFSLYCN*FISKSMLLEGL
Trigger: TAGTCCTTCAAGGAGCATGGATTTGGAAATGAAGCAATTGCAGTATAAACTAAAGAATGCTACTAATGAACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380647.8
CDS CAA 72 bp ACAGAGCAATTTTTCTTCGCAGCTTTAAATTTAACCTaGGTCATAGTTGTCTTACAATCATATCGTCCAGAT +
Preference number: 6 (lower is better)
Translates to: TEQFFFAALNLT*VIVVLQSYRPD
Trigger: ATCTGGACGATATGATTGTAAGACAACTATGACCAAGGTTAAATTTAAAGCTGCGAAGAAAAATTGCTCTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380647.8