RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTFR (Homo sapiens)

Ensembl gene IDs: ENSG00000122756

Ensembl transcript IDs: ENST00000351266.8, ENST00000378980.8, ENST00000417345.2, ENST00000610543.4

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGATGGCCCACCTCCCCTaGGGGAGGAAGGAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQMAHLP*GRKEGQ
Trigger: CTGGCCCTCCTTCCTCCCTCAGGGGAGGTGGGCCAT...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR GCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCACCTCTGCAGGTGCTCTaGATGTCCTCATGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPPLQVL*MSSWGA
Trigger: GGCACCCCATGAGGACATGCAGAGCACCTGCAGAGG...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR CCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGGGGGTCTTTGGTGGGTaGGTTAGCTGCATGGCCCAC +
Preference number: 2 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQGVFGG*VSCMAH
Trigger: GTGGGCCATGCAGCTAACCCACCCACCAAAGACCCC...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR GCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCCCTCTGCAGGTGCTCTaGATGTCCTCATGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSPLQVL*MSSWGA
Trigger: GGCACCCCATGAGGACATGCAGAGCACCTGCAGAGG...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR GCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGATAGAAACCGGGGTCTaGAGGCTCAGCTCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGIETGV*RLSSGL
Trigger: GAGGCCGGAGCTGAGCCTGCAGACCCCGGTTTCTAT...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR GCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGCTGCTCCTCTGCAGGTaGTCTGCATGTCCTCATGGG +
Preference number: 2 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGLLLCR*SACPHG
Trigger: CCCATGAGGACATGCAGAGCACCTGCAGAGGAGCAG...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR GCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAACTGCTCCTCTGCAGGTaGTCTGCATGTCCTCATGGG +
Preference number: 2 (lower is better)
Translates to: RQARARRGLHKLCLKRMQLLLCR*SACPHG
Trigger: CCCATGAGGACATGCAGAGCACCTGCAGAGGAGCAG...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR GCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGATAGAAACCGGGGTCTaGAGGCTCAGCTCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: QARARRGLHKLCLKRMQKIETGV*RLSSGL
Trigger: GAGGCCGGAGCTGAGCCTGCAGACCCCGGTTTCTAT...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR GCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGTCCTCCTGCCCGTGTaGAAAATAGAAACCGGGGTC +
Preference number: 2 (lower is better)
Translates to: RQARARRGLHKLCLKRMQVLLPV*KIETGV
Trigger: GACCCCGGTTTCTATTTTGCACACGGGCAGGAGGAC...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR GCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCTGCTCCTCTGCAGGTaGTCTGCATGTCCTCATGGG +
Preference number: 2 (lower is better)
Translates to: PPGSPQIVSEENAKGPPALLLCR*SACPHG
Trigger: CCCATGAGGACATGCAGAGCACCTGCAGAGGAGCAG...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR TCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGTCCACAAATTGTGTCTaGAGAGAATGCAAAAGGTCC +
Preference number: 2 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGSTNCV*RECKRS
Trigger: GGACCTTTTGCATTCTCTTCAGACACAATTTGTGGA...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR CAA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGAGGGTGAGGGGGTCTTaGGTGGGTGGGTTAGCTGCA +
Preference number: 3 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGRVRGS*VGGLAA
Trigger: TGCAGCTAACCCACCCACCAAAGACCCCCTCACCCT...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR-3UTR CAA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCACGGGGTCTCCACAAATaGTGTCTGAAGAGAATGCAA +
Preference number: 3 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPRGLHK*CLKRMQ
Trigger: TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR TCA 72 bp AGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTaGAGAGAATGCAAAAGGTCCTCCTGCCCGTGTGCA +
Preference number: 3 (lower is better)
Translates to: RPGPAGVSTNCV*RECKRSSCPCA
Trigger: TGCACACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCATGTTGGAGCGGCAGCTaGGCACAGGCTCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPCWSGS*AQAPAA
Trigger: CGCCGCGGGAGCCTGTGCTCAGCTGCCGCTCCAACA...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAATGGCCCACCTCCCCTaGGGGAGGAAGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPMAHLP*GRKEGQ
Trigger: CTGGCCCTCCTTCCTCCCTCAGGGGAGGTGGGCCAT...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCACTGGGCGTAGACAACTaGGGCGGCGGCGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPLGVDN*GGGGKH
Trigger: GTGCTTGCCGCCGCCGCCGCAGTTGTCTACGCCCAG...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGCCGGCGAGGGTTGCTaGGCACTGGCCGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSAGEGC*ALAGLP
Trigger: TGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGGCGGCAAGCCCACATaGAGCAGGACTTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPGGKPT*SRTWWR
Trigger: GCGCCACCAAGTCCTGCTGCATGTGGGCTTGCCGCC...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCATGGTGGTGCTGGTCGTaGTCTCCGCAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPWWCWS*SPQPGP
Trigger: AGGCCCAGGCTGCGGAGACCACGACCAGCACCACCA...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGGGGAGTCGCTGGCATTaGAGGGTCCAGCCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQGSRWH*RVQPKG
Trigger: CCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCC...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGCTCCTGGGAGTCGCTaGCATTGGAGGGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPAPGSR*HWRVQP
Trigger: GGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGC...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCACCAGCCGGCGAGGGTTaGTGGGCACTGGCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAPAGEG*WALAGL
Trigger: TAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGG...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCCCAGGGAGCTGGTGGTaGTGGTCGTGGTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSPGSWW*WSWSPQ
Trigger: CTGCGGAGACCACGACCAGCACCACCAGCTCCCTGG...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGGCCGGCGAGGGTTGCTaGGCACTGGCCGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGAGEGC*ALAGLP
Trigger: TGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGC...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAGCCGGCGAGGGTTGCTaGGCACTGGCCGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAAGEGC*ALAGLP
Trigger: TGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGC...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGTCCAGGGCGTAGCGTaGGCGGCTACGCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSVQGVA*AATLQS
Trigger: TGACTGGAGCGTAGCCGCCCACGCTACGCCCTGGAC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGGGAGCTGGTGGTGCTaGTCGTGGTCTCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSGSWWC*SWSPQP
Trigger: AGGCTGCGGAGACCACGACCAGCACCACCAGCTCCC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGGGGTGCCAGGGAGCTaGTGGTGCTGGTCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSGVPGS*WCWSWS
Trigger: AGACCACGACCAGCACCACCAGCTCCCTGGCACCCC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGTCCCCCAAGGGCTCCTaGGAGTCGCTGGCATTGGAG +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQSPKGS*ESLALE
Trigger: CTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGGA...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCATCCCCCAAGGGCTCCTaGGAGTCGCTGGCATTGGAG +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPSPKGS*ESLALE
Trigger: CTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGGA...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGTGTGGCAGCGGTTCTTaGGGGCTGGGTCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQCGSGS*GLGPSH
Trigger: GTGAGAAGGACCCAGCCCTCAAGAACCGCTGCCACA...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGCGGCGTAGGCATCTGTaGTGGTGTGTGCTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQRRRHL*WCVLCR
Trigger: ACGGCACAGCACACACCATCACAGATGCCTACGCCG...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCACGGCGTAGGCATCTGTaGTGGTGTGTGCTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPRRRHL*WCVLCR
Trigger: ACGGCACAGCACACACCATCACAGATGCCTACGCCG...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCACCTGGGCCTCCGTGGTaGGGTGTCGCGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAPGPPW*GVAVPQ
Trigger: CTGAGGAACCGCGACACCTCACCACGGAGGCCCAGG...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGATGGCCCACCTCCCCTaGGGGAGGAAGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGMAHLP*GRKEGQ
Trigger: CTGGCCCTCCTTCCTCCCTCAGGGGAGGTGGGCCAT...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAATGGCCCACCTCCCCTaGGGGAGGAAGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAMAHLP*GRKEGQ
Trigger: CTGGCCCTCCTTCCTCCCTCAGGGGAGGTGGGCCAT...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGCTGGGCGTAGACAACTaGGGCGGCGGCGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGLGVDN*GGGGKH
Trigger: GTGCTTGCCGCCGCCGCCGCAGTTGTCTACGCCCAG...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCCCCAGGCGCTCGTACTaGACATGGGGTGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSPRRSY*TWGASC
Trigger: ACAGGAGGCACCCCATGTGCAGTACGAGCGCCTGGG...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCACAGGTCGAGGGGGTCTaGCACGTCACCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAQVEGV*HVTSSR
Trigger: CCGGCTGGAGGTGACGTGGCAGACCCCCTCGACCTG...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGCTCAGATCAAGAGACTaGTGGCAGTGGCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQLRSRD*WQWRQR
Trigger: CCGCTGCCGCCACTGCCAGCAGTCTCTTGATCTGAG...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGCCTCTGCAGGTGCTCTaGATGTCCTCATGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQPLQVL*MSSWGA
Trigger: GGCACCCCATGAGGACATGCAGAGCACCTGCAGAGG...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCACGCTCGTACTGCACATaGGGTGCCTCCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPRSYCT*GASCGL
Trigger: CAGTCCACAGGAGGCACCCCATGTGCAGTACGAGCG...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGACATGCAGCAGGACTTaGTGGCGCAGGTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQTCSRT*WRRCQE
Trigger: CTCCTGGCACCTGCGCCACCAAGTCCTGCTGCATGT...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGAGACTGCTGGCAGTaGCGGCAGCGGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENARDCWQ*RQRQPG
Trigger: CCCTGGCTGCCGCTGCCGCCACTGCCAGCAGTCTCT...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGAGAGACTGCTGGCAGTaGCGGCAGCGGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGRDCWQ*RQRQPG
Trigger: CCCTGGCTGCCGCTGCCGCCACTGCCAGCAGTCTCT...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCACCAGCTGAGAGCCGTTaGGCAGGTCAGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAPAESR*AGQGPG
Trigger: ACCTGGCCCCTGACCTGCTCAACGGCTCTCAGCTGG...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGCCAGCTGAGAGCCGTTaGGCAGGTCAGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGPAESR*AGQGPG
Trigger: ACCTGGCCCCTGACCTGCTCAACGGCTCTCAGCTGG...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCTGTGGCAGCGGTTCTTaGGGGCTGGGTCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSCGSGS*GLGPSH
Trigger: GTGAGAAGGACCCAGCCCTCAAGAACCGCTGCCACA...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAGGCGGCAAGCCCACATaGAGCAGGACTTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAGGKPT*SRTWWR
Trigger: GCGCCACCAAGTCCTGCTGCATGTGGGCTTGCCGCC...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCATGGGCAGATGCCAGCTaGAGTAGAAGCCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPWADAS*SRSPWG
Trigger: ACCCCAAGGGCTTCTACTGCAGCTGGCATCTGCCCA...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAACAGGTCGAGGGGGTCTaGCACGTCACCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQQVEGV*HVTSSR
Trigger: CCGGCTGGAGGTGACGTGGCAGACCCCCTCGACCTG...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCATCGGACAGCTCCACATaGTGCCACTGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPSDSST*CHWSRM
Trigger: CATCCTGGACCAGTGGCAGCATGTGGAGCTGTCCGA...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCCTCAGATCAAGAGACTaGTGGCAGTGGCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSLRSRD*WQWRQR
Trigger: CCGCTGCCGCCACTGCCAGCAGTCTCTTGATCTGAG...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCATAGAAACCGGGGTCTaGAGGCTCAGCTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSIETGV*RLSSGL
Trigger: GAGGCCGGAGCTGAGCCTGCAGACCCCGGTTTCTAT...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCACATGCAGCAGGACTTaGTGGCGCAGGTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSTCSRT*WRRCQE
Trigger: CTCCTGGCACCTGCGCCACCAAGTCCTGCTGCATGT...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGTGGTGGTGCTGGTCGTaGTCTCCGCAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGWWCWS*SPQPGP
Trigger: AGGCCCAGGCTGCGGAGACCACGACCAGCACCACCA...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAGGGAGCTGGTGGTGCTaGTCGTGGTCTCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAGSWWC*SWSPQP
Trigger: AGGCTGCGGAGACCACGACCAGCACCACCAGCTCCC...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAGAGACTGCTGGCAGTaGCGGCAGCGGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQRDCWQ*RQRQPG
Trigger: CCCTGGCTGCCGCTGCCGCCACTGCCAGCAGTCTCT...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCACTCTGCATGTCCTCATaGGGTGCCGGGCTCAGATCA +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPLCMSS*GAGLRS
Trigger: TGATCTGAGCCCGGCACCCCATGAGGACATGCAGAG...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGGGGTCTTTGGTGGGTaGGTTAGCTGCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSGVFGG*VSCMAH
Trigger: GTGGGCCATGCAGCTAACCCACCCACCAAAGACCCC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGGCTCCTGGGAGTCGCTaGCATTGGAGGGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGAPGSR*HWRVQP
Trigger: GGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGC...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCATGGCAACAGAGACCCTaGGATAGACAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPWQQRP*DRQEAG
Trigger: CCCAGCCTCCTGTCTATCCCAGGGTCTCTGTTGCCA...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
3UTR CAA 72 bp GGGCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATaGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRQARARRGLHK*CLKRMQKVLLP
Trigger: GGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAACCAGCTGAGAGCCGTTaGGCAGGTCAGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQPAESR*AGQGPG
Trigger: ACCTGGCCCCTGACCTGCTCAACGGCTCTCAGCTGG...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCCAGCCGGCGAGGGTTaGTGGGCACTGGCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVPAGEG*WALAGL
Trigger: TAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGG...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGACAGCTCCACATGCTaGCACTGGTCCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSDSSTC*HWSRMR
Trigger: CCTCATCCTGGACCAGTGGCAGCATGTGGAGCTGTC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGCATGTCCTCATGGGGTaGCGGGCTCAGATCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQHVLMG*RAQIKR
Trigger: TCTCTTGATCTGAGCCCGGCACCCCATGAGGACATG...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCATGGGGTGCCTCCTGTaGACTGTGTCTCTGGGCGTA +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSMGCLL*TVSLGV
Trigger: TACGCCCAGAGACACAGTCCACAGGAGGCACCCCAT...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGGGAGCTGGTGGTGCTaGTCGTGGTCTCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQGSWWC*SWSPQP
Trigger: AGGCTGCGGAGACCACGACCAGCACCACCAGCTCCC...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGGGGTGCCAGGGAGCTaGTGGTGCTGGTCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQGVPGS*WCWSWS
Trigger: AGACCACGACCAGCACCACCAGCTCCCTGGCACCCC...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGGGTGGGTTAGCTGCATaGCCCACCTCCCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGGGLAA*PTSPEG
Trigger: TCCCTCAGGGGAGGTGGGCCATGCAGCTAACCCACC...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCTGTTGGAGCGGCAGCTaGGCACAGGCTCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLCWSGS*AQAPAA
Trigger: CGCCGCGGGAGCCTGTGCTCAGCTGCCGCTCCAACA...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCATGTGGCAGCGGTTCTTaGGGGCTGGGTCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENACGSGS*GLGPSH
Trigger: GTGAGAAGGACCCAGCCCTCAAGAACCGCTGCCACA...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGCCACTGGTCCAGGATaGGGGGTCGGTAGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQATGPG*GVGSAE
Trigger: TTCTGCGCTACCGACCCCTCATCCTGGACCAGTGGC...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGCCTGGGCCTCCGTGGTaGGGTGTCGCGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKPGPPW*GVAVPQ
Trigger: CTGAGGAACCGCGACACCTCACCACGGAGGCCCAGG...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGCAGAGGGGAGGGGACTaGAAATTGTGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGQRGGD*KLWVLG
Trigger: CCCCAGCACCCACAATTTTCAGTCCCCTCCCCTCTG...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCCGCAGCATCCCAGTTTaGTGTCCCACATGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSRSIPV*CPTWQC
Trigger: ACACTGCCATGTGGGACAGCAAACTGGGATGCTGCG...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCAGGTCGAGGGGGTCTaGCACGTCACCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVQVEGV*HVTSSR
Trigger: CCGGCTGGAGGTGACGTGGCAGACCCCCTCGACCTG...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGCTCAGATCAAGAGACTaGTGGCAGTGGCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGLRSRD*WQWRQR
Trigger: CCGCTGCCGCCACTGCCAGCAGTCTCTTGATCTGAG...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCACCTCTGCAGGTGCTCTaGATGTCCTCATGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAPLQVL*MSSWGA
Trigger: GGCACCCCATGAGGACATGCAGAGCACCTGCAGAGG...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGTCCTCCTGCCCGTGTaGAAAATAGAAACCGGGGTC +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSVLLPV*KIETGV
Trigger: GACCCCGGTTTCTATTTTGCACACGGGCAGGAGGAC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGTGCAGCAGGACTTGGTaGCGCAGGTGCCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGCSRTW*RRCQES
Trigger: TGACTCCTGGCACCTGCGCCACCAAGTCCTGCTGCA...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGACATGCAGCAGGACTTaGTGGCGCAGGTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGTCSRT*WRRCQE
Trigger: CTCCTGGCACCTGCGCCACCAAGTCCTGCTGCATGT...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGCGGTTCTTGAGGGCTaGGTCCTTCTCACAGACCAT +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSAVLEG*VLLTDH
Trigger: ATGGTCTGTGAGAAGGACCCAGCCCTCAAGAACCGC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGATAGCTGTGGCATTGTaGCCCAGGGCATTGCTGACA +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQIAVAL*PRALLT
Trigger: TGTCAGCAATGCCCTGGGCCACAATGCCACAGCTAT...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGTCCTTGGCTGCCACCTaGATAATGTACTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQSLAAT*IMYSFP
Trigger: CGGGAAGGAGTACATTATCCAGGTGGCAGCCAAGGA...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGGATCTTCGTGGTAGGTaGGGGTGCCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGDLRGR*GCQGAG
Trigger: ACCAGCTCCCTGGCACCCCCACCTACCACGAAGATC...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGGGGGTCTTTGGTGGGTaGGTTAGCTGCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGGVFGG*VSCMAH
Trigger: GTGGGCCATGCAGCTAACCCACCCACCAAAGACCCC...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGGCAGCACAGTCACATTaGAGGTGTTGGGAATGTAGG +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQAAQSH*RCWECR
Trigger: CCTACATTCCCAACACCTTCAATGTGACTGTGCTGC...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGGAGAAATCGGATGTaGGAGGCTCCCCTCACGTCC +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENARRNRM*EAPLTS
Trigger: GGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCT...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGAGGAGAAATCGGATGTaGGAGGCTCCCCTCACGTCC +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGRRNRM*EAPLTS
Trigger: GGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCT...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGCAGGAGCTTATAATCTaGTGGTGGCAACAGAGACCC +
Preference number: 4 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQQELII*WWQQRP
Trigger: GGGTCTCTGTTGCCACCATCAGATTATAAGCTCCTG...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCATGGGCAGATGCCAGCTaGAGTAGAAGCCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAWADAS*SRSPWG
Trigger: ACCCCAAGGGCTTCTACTGCAGCTGGCATCTGCCCA...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCATCGGACAGCTCCACATaGTGCCACTGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENASDSST*CHWSRM
Trigger: CATCCTGGACCAGTGGCAGCATGTGGAGCTGTCCGA...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCCAGGGAGCTGGTGGTaGTGGTCGTGGTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVPGSWW*WSWSPQ
Trigger: CTGCGGAGACCACGACCAGCACCACCAGCTCCCTGG...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCACTGCTCCTCTGCAGGTaGTCTGCATGTCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENALLLCR*SACPHG
Trigger: CCCATGAGGACATGCAGAGCACCTGCAGAGGAGCAG...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGATGGGGTGCCTCCTGTaGACTGTGTCTCTGGGCGTA +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGMGCLL*TVSLGV
Trigger: TACGCCCAGAGACACAGTCCACAGGAGGCACCCCAT...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTGCCAGGGAGCTGGTaGTGCTGGTCGTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKVPGSW*CWSWSP
Trigger: CGGAGACCACGACCAGCACCACCAGCTCCCTGGCAC...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGTGCCAGGGAGCTGGTaGTGCTGGTCGTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVVPGSW*CWSWSP
Trigger: CGGAGACCACGACCAGCACCACCAGCTCCCTGGCAC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAGATCAAGAGACTGCTaGCAGTGGCGGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQRSRDC*QWRQRQ
Trigger: CTGCCGCTGCCGCCACTGCCAGCAGTCTCTTGATCT...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGGGAGTCGCTGGCATTaGAGGGTCCAGCCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVGSRWH*RVQPKG
Trigger: CCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGGGAGTCGCTGGCATTaGAGGGTCCAGCCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKGSRWH*RVQPKG
Trigger: CCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCC...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGCCACTGGTCCAGGATaGGGGGTCGGTAGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVATGPG*GVGSAE
Trigger: TTCTGCGCTACCGACCCCTCATCCTGGACCAGTGGC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAGTACTGCACATGGGGTaGCTCCTGTGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAVLHMG*LLWTVS
Trigger: AGACACAGTCCACAGGAGGCACCCCATGTGCAGTAC...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCCCAGGCGCTCGTACTaGACATGGGGTGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVPRRSY*TWGASC
Trigger: ACAGGAGGCACCCCATGTGCAGTACGAGCGCCTGGG...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCCAGCCGGCGAGGGTTaGTGGGCACTGGCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVPAGEG*WALAGL
Trigger: TAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGACAGCTCCACATGCTaGCACTGGTCCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQDSSTC*HWSRMR
Trigger: CCTCATCCTGGACCAGTGGCAGCATGTGGAGCTGTC...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGATCTGTGATGGTGTGTaGTGTGCCGTCGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGICDGV*CAVGQL
Trigger: GAGCTGTCCGACGGCACAGCACACACCATCACAGAT...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCACTCATTGTCCTTGGCTaGCACCTGGATAATGTACTC +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPLIVLG*HLDNVL
Trigger: GAGTACATTATCCAGGTGGCAGCCAAGGACAATGAG...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCACATGTCCTCATGGGGTaGCGGGCTCAGATCAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAHVLMG*RAQIKR
Trigger: TCTCTTGATCTGAGCCCGGCACCCCATGAGGACATG...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAGTTTGCTGTCCCACATaGCAGTGTCACGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAVCCPT*QCHVRA
Trigger: GGCTCTGACGTGACACTGCCATGTGGGACAGCAAAC...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGTGCAGTAGAAGCCCTTaGGGTAAGTGTTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGCSRSP*GKCWSG
Trigger: GCCGCTCCAACACTTACCCCAAGGGCTTCTACTGCA...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCATGCAGTAGAAGCCCTTaGGGTAAGTGTTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENACSRSP*GKCWSG
Trigger: GCCGCTCCAACACTTACCCCAAGGGCTTCTACTGCA...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCGTCCAGGGCGTAGCGTaGGCGGCTACGCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLVQGVA*AATLQS
Trigger: TGACTGGAGCGTAGCCGCCCACGCTACGCCCTGGAC...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGGTGGGTTAGCTGCATaGCCCACCTCCCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVGGLAA*PTSPEG
Trigger: TCCCTCAGGGGAGGTGGGCCATGCAGCTAACCCACC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGGTGGGTTAGCTGCATaGCCCACCTCCCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKGGLAA*PTSPEG
Trigger: TCCCTCAGGGGAGGTGGGCCATGCAGCTAACCCACC...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCGCTCCTGGGAGTCGCTaGCATTGGAGGGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLAPGSR*HWRVQP
Trigger: GGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGC...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAATGGCAACAGAGACCCTaGGATAGACAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQWQQRP*DRQEAG
Trigger: CCCAGCCTCCTGTCTATCCCAGGGTCTCTGTTGCCA...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCAGCGCAGAAAGAACTTaGGAGGAAAAGACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSSAERT*EEKTQG
Trigger: ACCCTGAGTCTTTTCCTCTCAAGTTCTTTCTGCGCT...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCGCCACTGGTCCAGGATaGGGGGTCGGTAGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLATGPG*GVGSAE
Trigger: TTCTGCGCTACCGACCCCTCATCCTGGACCAGTGGC...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGCGGCGTAGGCATCTGTaGTGGTGTGTGCTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKRRRHL*WCVLCR
Trigger: ACGGCACAGCACACACCATCACAGATGCCTACGCCG...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCCTGGGCCTCCGTGGTaGGGTGTCGCGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVPGPPW*GVAVPQ
Trigger: CTGAGGAACCGCGACACCTCACCACGGAGGCCCAGG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCACTTGGTGGCGCAGGTaGCAGGAGTCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVTWWRR*QESRWK
Trigger: CTTCCACCGTGACTCCTGGCACCTGCGCCACCAAGT...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCCTCTGCAGGTGCTCTaGATGTCCTCATGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVPLQVL*MSSWGA
Trigger: GGCACCCCATGAGGACATGCAGAGCACCTGCAGAGG...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGTGCAGCAGGACTTGGTaGCGCAGGTGCCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKCSRTW*RRCQES
Trigger: TGACTCCTGGCACCTGCGCCACCAAGTCCTGCTGCA...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGCGGTTCTTGAGGGCTaGGTCCTTCTCACAGACCAT +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQAVLEG*VLLTDH
Trigger: ATGGTCTGTGAGAAGGACCCAGCCCTCAAGAACCGC...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGGCTACCACATTTTCTaGAGGATCAGGCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPGYHIF*RIRLHN
Trigger: ATTGTGAAGCCTGATCCTCCAGAAAATGTGGTAGCC...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCTCCACATGCTGCCACTaGTCCAGGATGAGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVSTCCH*SRMRGR
Trigger: CCGACCCCTCATCCTGGACCAGTGGCAGCATGTGGA...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGTCCTTGGCTGCCACCTaGATAATGTACTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGSLAAT*IMYSFP
Trigger: CGGGAAGGAGTACATTATCCAGGTGGCAGCCAAGGA...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGATCTTCGTGGTAGGTaGGGGTGCCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVDLRGR*GCQGAG
Trigger: ACCAGCTCCCTGGCACCCCCACCTACCACGAAGATC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGATCTTCGTGGTAGGTaGGGGTGCCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKDLRGR*GCQGAG
Trigger: ACCAGCTCCCTGGCACCCCCACCTACCACGAAGATC...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGGGGTCTTTGGTGGGTaGGTTAGCTGCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVGVFGG*VSCMAH
Trigger: GTGGGCCATGCAGCTAACCCACCCACCAAAGACCCC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCCCTCAAGACGGCTGTaGTCCCCGTGCTTCACGCGC +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAPSRRL*SPCFTR
Trigger: GCGCGTGAAGCACGGGGACCACAGCCGTCTTGAGGG...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610543.4
CDS-3UTR TCA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCATGGAGACCTTGTACTTaGTGGTGGAGAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAWRPCT*WWRTGA
Trigger: TGCACCTGTTCTCCACCATCAAGTACAAGGTCTCCA...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCAGGAGAAATCGGATGTaGGAGGCTCCCCTCACGTCC +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVRRNRM*EAPLTS
Trigger: GGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCT...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCCAGAGGGGAGGGGACTaGAAATTGTGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLQRGGD*KLWVLG
Trigger: CCCCAGCACCCACAATTTTCAGTCCCCTCCCCTCTG...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCCCAGGCGCTCGTACTaGACATGGGGTGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAPRRSY*TWGASC
Trigger: ACAGGAGGCACCCCATGTGCAGTACGAGCGCCTGGG...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGTGGGCAGATGCCAGCTaGAGTAGAAGCCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKWADAS*SRSPWG
Trigger: ACCCCAAGGGCTTCTACTGCAGCTGGCATCTGCCCA...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCTCGGACAGCTCCACATaGTGCCACTGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVSDSST*CHWSRM
Trigger: CATCCTGGACCAGTGGCAGCATGTGGAGCTGTCCGA...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCCAGGGAGCTGGTGGTaGTGGTCGTGGTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVPGSWW*WSWSPQ
Trigger: CTGCGGAGACCACGACCAGCACCACCAGCTCCCTGG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCCGCTCGTACTGCACATaGGGTGCCTCCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLRSYCT*GASCGL
Trigger: CAGTCCACAGGAGGCACCCCATGTGCAGTACGAGCG...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCTGCAGCAGGACTTGGTaGCGCAGGTGCCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLCSRTW*RRCQES
Trigger: TGACTCCTGGCACCTGCGCCACCAAGTCCTGCTGCA...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCGGCTACCACATTTTCTaGAGGATCAGGCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSGYHIF*RIRLHN
Trigger: ATTGTGAAGCCTGATCCTCCAGAAAATGTGGTAGCC...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGGTCCAGGGCGTAGCGTaGGCGGCTACGCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVVQGVA*AATLQS
Trigger: TGACTGGAGCGTAGCCGCCCACGCTACGCCCTGGAC...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGGTGCCAGGGAGCTGGTaGTGCTGGTCGTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVVPGSW*CWSWSP
Trigger: CGGAGACCACGACCAGCACCACCAGCTCCCTGGCAC...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGGGGGTGCCAGGGAGCTaGTGGTGCTGGTCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVGVPGS*WCWSWS
Trigger: AGACCACGACCAGCACCACCAGCTCCCTGGCACCCC...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCAGATCAAGAGACTGCTaGCAGTGGCGGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLRSRDC*QWRQRQ
Trigger: CTGCCGCTGCCGCCACTGCCAGCAGTCTCTTGATCT...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCTCCCCCAAGGGCTCCTaGGAGTCGCTGGCATTGGAG +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPASPKGS*ESLALE
Trigger: CTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGGA...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAGCAGCACAGTCACATTaGAGGTGTTGGGAATGTAGG +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQAAQSH*RCWECR
Trigger: CCTACATTCCCAACACCTTCAATGTGACTGTGCTGC...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAATGGAGACCTTGTACTTaGTGGTGGAGAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQWRPCT*WWRTGA
Trigger: TGCACCTGTTCTCCACCATCAAGTACAAGGTCTCCA...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAACAGGAGCTTATAATCTaGTGGTGGCAACAGAGACCC +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQQELII*WWQQRP
Trigger: GGGTCTCTGTTGCCACCATCAGATTATAAGCTCCTG...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGTACTGCACATGGGGTaGCTCCTGTGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVVLHMG*LLWTVS
Trigger: AGACACAGTCCACAGGAGGCACCCCATGTGCAGTAC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCATCTGTGATGGTGTGTaGTGTGCCGTCGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVICDGV*CAVGQL
Trigger: GAGCTGTCCGACGGCACAGCACACACCATCACAGAT...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCATAGAAACCGGGGTCTaGAGGCTCAGCTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAIETGV*RLSSGL
Trigger: GAGGCCGGAGCTGAGCCTGCAGACCCCGGTTTCTAT...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGTTTGCTGTCCCACATaGCAGTGTCACGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVVCCPT*QCHVRA
Trigger: GGCTCTGACGTGACACTGCCATGTGGGACAGCAAAC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGTGCAGTAGAAGCCCTTaGGGTAAGTGTTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKCSRSP*GKCWSG
Trigger: GCCGCTCCAACACTTACCCCAAGGGCTTCTACTGCA...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCTCCACATGCTGCCACTaGTCCAGGATGAGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPASTCCH*SRMRGR
Trigger: CCGACCCCTCATCCTGGACCAGTGGCAGCATGTGGA...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCAGATCAAGAGACTGCTaGCAGTGGCGGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPARSRDC*QWRQRQ
Trigger: CTGCCGCTGCCGCCACTGCCAGCAGTCTCTTGATCT...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCGGCCCAGGGCATTGCTaGCACTTATGGAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLGPGHC*HLWRPC
Trigger: ACAAGGTCTCCATAAGTGTCAGCAATGCCCTGGGCC...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCAGAGGGGAGGGGACTaGAAATTGTGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVQRGGD*KLWVLG
Trigger: CCCCAGCACCCACAATTTTCAGTCCCCTCCCCTCTG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGCAGACTAGAAGGGACTaGCAGGGCATTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGQTRRD*QGIKYC
Trigger: ACAGTATTTAATGCCCTGTCAGTCCCTTCTAGTCTG...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGACTTGGTGGCGCAGGTaGCAGGAGTCACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVTWWRR*QESRWK
Trigger: CTTCCACCGTGACTCCTGGCACCTGCGCCACCAAGT...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCGACAGCTCCACATGCTaGCACTGGTCCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPADSSTC*HWSRMR
Trigger: CCTCATCCTGGACCAGTGGCAGCATGTGGAGCTGTC...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAACTCATTGTCCTTGGCTaGCACCTGGATAATGTACTC +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQLIVLG*HLDNVL
Trigger: GAGTACATTATCCAGGTGGCAGCCAAGGACAATGAG...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCCATGTCCTCATGGGGTaGCGGGCTCAGATCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLHVLMG*RAQIKR
Trigger: TCTCTTGATCTGAGCCCGGCACCCCATGAGGACATG...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCGTCCTCCTGCCCGTGTaGAAAATAGAAACCGGGGTC +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLVLLPV*KIETGV
Trigger: GACCCCGGTTTCTATTTTGCACACGGGCAGGAGGAC...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCGTTTGCTGTCCCACATaGCAGTGTCACGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLVCCPT*QCHVRA
Trigger: GGCTCTGACGTGACACTGCCATGTGGGACAGCAAAC...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGATAGCTGTGGCATTGTaGCCCAGGGCATTGCTGACA +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKIAVAL*PRALLT
Trigger: TGTCAGCAATGCCCTGGGCCACAATGCCACAGCTAT...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGTCCACATGCTGCCACTaGTCCAGGATGAGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVSTCCH*SRMRGR
Trigger: CCGACCCCTCATCCTGGACCAGTGGCAGCATGTGGA...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCTCTGCATGTCCTCATaGGGTGCCGGGCTCAGATCA +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPALCMSS*GAGLRS
Trigger: TGATCTGAGCCCGGCACCCCATGAGGACATGCAGAG...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCCATCTCTTCACCACTaGCCACACACCAAGCACATC +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVPSLHH*PHTKHI
Trigger: GATGTGCTTGGTGTGTGGCCAGTGGTGAAGAGATGG...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCGGCCCAGGGCATTGCTaGCACTTATGGAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAGPGHC*HLWRPC
Trigger: ACAAGGTCTCCATAAGTGTCAGCAATGCCCTGGGCC...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGCAGCATCCCAGTTTaGTGTCCCACATGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPARSIPV*CPTWQC
Trigger: ACACTGCCATGTGGGACAGCAAACTGGGATGCTGCG...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCATCTGTGATGGTGTGTaGTGTGCCGTCGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAICDGV*CAVGQL
Trigger: GAGCTGTCCGACGGCACAGCACACACCATCACAGAT...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCTGCTCCTCTGCAGGTaGTCTGCATGTCCTCATGGG +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVLLLCR*SACPHG
Trigger: CCCATGAGGACATGCAGAGCACCTGCAGAGGAGCAG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGATGGGGTGCCTCCTGTaGACTGTGTCTCTGGGCGTA +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVMGCLL*TVSLGV
Trigger: TACGCCCAGAGACACAGTCCACAGGAGGCACCCCAT...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCGCGGTTCTTGAGGGCTaGGTCCTTCTCACAGACCAT +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAAVLEG*VLLTDH
Trigger: ATGGTCTGTGAGAAGGACCCAGCCCTCAAGAACCGC...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCATAGCTGTGGCATTGTaGCCCAGGGCATTGCTGACA +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLIAVAL*PRALLT
Trigger: TGTCAGCAATGCCCTGGGCCACAATGCCACAGCTAT...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGTGGCAACAGAGACCCTaGGATAGACAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVWQQRP*DRQEAG
Trigger: CCCAGCCTCCTGTCTATCCCAGGGTCTCTGTTGCCA...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCGCAGCACAGTCACATTaGAGGTGTTGGGAATGTAGG +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLAAQSH*RCWECR
Trigger: CCTACATTCCCAACACCTTCAATGTGACTGTGCTGC...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGGGCCCAGGGCATTGCTaGCACTTATGGAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVGPGHC*HLWRPC
Trigger: ACAAGGTCTCCATAAGTGTCAGCAATGCCCTGGGCC...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCAGCGCAGAAAGAACTTaGGAGGAAAAGACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVSAERT*EEKTQG
Trigger: ACCCTGAGTCTTTTCCTCTCAAGTTCTTTCTGCGCT...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGAGCGCAGAAAGAACTTaGGAGGAAAAGACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKSAERT*EEKTQG
Trigger: ACCCTGAGTCTTTTCCTCTCAAGTTCTTTCTGCGCT...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAATCCACAAATTGTGTCTaGAGAGAATGCAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RQARARRGLHKLCLKRMQSTNCV*RECKRS
Trigger: GGACCTTTTGCATTCTCTTCAGACACAATTTGTGGA...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGACCAAGGGGGCAAGATaGGGTGACAAGGCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVTKGAR*GDKARV
Trigger: GACTCTAGCCTTGTCACCTCATCTTGCCCCCTTGGT...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGGTACTGCACATGGGGTaGCTCCTGTGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVVLHMG*LLWTVS
Trigger: AGACACAGTCCACAGGAGGCACCCCATGTGCAGTAC...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCGCAGCATCCCAGTTTaGTGTCCCACATGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVRSIPV*CPTWQC
Trigger: ACACTGCCATGTGGGACAGCAAACTGGGATGCTGCG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR GCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGGTCCTCCTGCCCGTGTaGAAAATAGAAACCGGGGTC +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVVLLPV*KIETGV
Trigger: GACCCCGGTTTCTATTTTGCACACGGGCAGGAGGAC...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCTGGAGACCTTGTACTTaGTGGTGGAGAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAWRPCT*WWRTGA
Trigger: TGCACCTGTTCTCCACCATCAAGTACAAGGTCTCCA...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCAGACTAGAAGGGACTaGCAGGGCATTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVQTRRD*QGIKYC
Trigger: ACAGTATTTAATGCCCTGTCAGTCCCTTCTAGTCTG...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCACAGCAAGTTACCATTaGGTCAGACTAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVTASYH*VRLEGT
Trigger: AGTCCCTTCTAGTCTGACTCAATGGTAACTTGCTGT...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGACAGCAAGTTACCATTaGGTCAGACTAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKTASYH*VRLEGT
Trigger: AGTCCCTTCTAGTCTGACTCAATGGTAACTTGCTGT...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCGGCTACCACATTTTCTaGAGGATCAGGCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVGYHIF*RIRLHN
Trigger: ATTGTGAAGCCTGATCCTCCAGAAAATGTGGTAGCC...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCCATCTCTTCACCACTaGCCACACACCAAGCACATC +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVPSLHH*PHTKHI
Trigger: GATGTGCTTGGTGTGTGGCCAGTGGTGAAGAGATGG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGTCCACAAATTGTGTCTaGAGAGAATGCAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: QARARRGLHKLCLKRMQKSTNCV*RECKRS
Trigger: GGACCTTTTGCATTCTCTTCAGACACAATTTGTGGA...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCAGGAGCTTATAATCTaGTGGTGGCAACAGAGACCC +
Preference number: 4 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVQELII*WWQQRP
Trigger: GGGTCTCTGTTGCCACCATCAGATTATAAGCTCCTG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCCAGACTAGAAGGGACTaGCAGGGCATTAAATACTGT +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLQTRRD*QGIKYC
Trigger: ACAGTATTTAATGCCCTGTCAGTCCCTTCTAGTCTG...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCACAGCAAGTTACCATTaGGTCAGACTAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLTASYH*VRLEGT
Trigger: AGTCCCTTCTAGTCTGACTCAATGGTAACTTGCTGT...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR TCA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCTCCACAAATTGTGTCTaGAGAGAATGCAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPGSPQIVSEENAKGPPASTNCV*RECKRS
Trigger: GGACCTTTTGCATTCTCTTCAGACACAATTTGTGGA...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGTCCAGCCGGCGAGGGTaGCTGGGCACTGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGSSRRG*LGTGRA
Trigger: AGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGA...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGTGGGAGTCGCTGGCATaGGAGGGTCCAGCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQWESLA*EGPAQG
Trigger: CCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCA...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAATCCAGCCGGCGAGGGTaGCTGGGCACTGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RQARARRGLHKLCLKRMQSSRRG*LGTGRA
Trigger: AGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGA...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCTGGGAGTCGCTGGCATaGGAGGGTCCAGCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSWESLA*EGPAQG
Trigger: CCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCA...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS GCA 90 bp GCCAGGTCGAGGGGGTCTGCCACGTCACCTCCAGCCGGCGAGGGTTaGTGGGCACTGGCCGGGCTACCACATTTTCTGGAGGATCAGGCT +
Preference number: 5 (lower is better)
Translates to: ARSRGSATSPPAGEG*WALAGLPHFLEDQA
Trigger: AGCCTGATCCTCCAGAAAATGTGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGAGGTGACGTGGCAGACCCCCTCGACCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS-3UTR CAA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGAGGGTGAGGGGGTCTTaGGTGGGTGGGTTAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQRVRGS*VGGLAA
Trigger: TGCAGCTAACCCACCCACCAAAGACCCCCTCACCCT...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS GCA 90 bp AACTTGAGAGGAAAAGACTCAGGGTCAGGCCAGGTCGAGGGGGTCTaGCACGTCACCTCCAGCCGGCGAGGGTTGCTGGGCACTGGCCGG +
Preference number: 5 (lower is better)
Translates to: NLRGKDSGSGQVEGV*HVTSSRRGLLGTGR
Trigger: CCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGAGGTGACGTGGCAGACCCCCTCGACCTGGCCTGACCCTGAGTCTTTTCCTCTCAAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS-3UTR CAA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCATGGGAGTCGCTGGCATaGGAGGGTCCAGCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAWESLA*EGPAQG
Trigger: CCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCA...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS TCA 90 bp GCCAGCTGCAGTAGAAGCCCTTGGGGTAAGTGTTGGAGCGGCAGCTaGGCACAGGCTCCCGCGGCGGCAAGCCCACATGCAGCAGGACTT +
Preference number: 5 (lower is better)
Translates to: ASCSRSPWGKCWSGS*AQAPAAASPHAAGL
Trigger: AAGTCCTGCTGCATGTGGGCTTGCCGCCGCGGGAGCCTGTGCTCAGCTGCCGCTCCAACACTTACCCCAAGGGCTTCTACTGCAGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS-3UTR CAA 90 bp GGGGCCAGGGTGAGGGGGTCTTTGGTGGGTGGGTTAGCTGCATGGCCCACCTCCATGTGGCAGCGGTTCTaGAGGGCTGGGTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GARVRGSLVGGLAAWPTSMWQRF*RAGSFS
Trigger: TGAGAAGGACCCAGCCCTCAAGAACCGCTGCCACAT...GGAGGTGGGCCATGCAGCTAACCCACCCACCAAAGACCCCCTCACCCTGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS TCA 90 bp CACTGTGGCCCAGTTCCAGGCCATGGAGCACCAGCTGAGAGCCGTTaGGCAGGTCAGGGGCCAGGTCTGTCCCATTTACCCGCCACGTCA +
Preference number: 5 (lower is better)
Translates to: HCGPVPGHGAPAESR*AGQGPGLSHLPATS
Trigger: TGACGTGGCGGGTAAATGGGACAGACCTGGCCCCTGACCTGCTCAACGGCTCTCAGCTGGTGCTCCATGGCCTGGAACTGGGCCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS-3UTR CAA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCTCCAGCCGGCGAGGGTaGCTGGGCACTGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: PPGSPQIVSEENAKGPPASSRRG*LGTGRA
Trigger: AGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGA...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS GCA 90 bp CAGGTCTGTCCCATTTACCCGCCACGTCACCGCAGCATCCCAGTTTaGTGTCCCACATGGCAGTGTCACGTCAGAGCCCAGGCGCTCGTA +
Preference number: 5 (lower is better)
Translates to: QVCPIYPPRHRSIPV*CPTWQCHVRAQALV
Trigger: TACGAGCGCCTGGGCTCTGACGTGACACTGCCATGTGGGACAGCAAACTGGGATGCTGCGGTGACGTGGCGGGTAAATGGGACAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS-3UTR CAA 90 bp CCCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCATCACAGACCATAATTTaGGAGCCATGCAGCACAGTC +
Preference number: 5 (lower is better)
Translates to: PPRAPGSRWHWRVQPKGPSQTII*EPCSTV
Trigger: GACTGTGCTGCATGGCTCCAAAATTATGGTCTGTGA...TGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAATGTGGCAGCGGTTCTaGAGGGCTGGGTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RQARARRGLHKLCLKRMQMWQRF*RAGSFS
Trigger: TGAGAAGGACCCAGCCCTCAAGAACCGCTGCCACAT...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGTTGTGGCCCAGGGCATaGCTGACACTTATGGAGACC +
Preference number: 5 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGLWPRA*LTLMET
Trigger: GGTCTCCATAAGTGTCAGCAATGCCCTGGGCCACAA...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCATTGTGGCCCAGGGCATaGCTGACACTTATGGAGACC +
Preference number: 5 (lower is better)
Translates to: AAGPGPPGSPQIVSEENALWPRA*LTLMET
Trigger: GGTCTCCATAAGTGTCAGCAATGCCCTGGGCCACAA...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGCCGCAGCATCCCAGTTaGCTGTCCCACATGGCAGTG +
Preference number: 5 (lower is better)
Translates to: QARARRGLHKLCLKRMQKPQHPS*LSHMAV
Trigger: CACTGCCATGTGGGACAGCAAACTGGGATGCTGCGG...CTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp GCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCCGCAGCATCCCAGTTaGCTGTCCCACATGGCAGTG +
Preference number: 5 (lower is better)
Translates to: ARARRGLHKLCLKRMQKVPQHPS*LSHMAV
Trigger: CACTGCCATGTGGGACAGCAAACTGGGATGCTGCGG...GACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CCCCAAGGGCTCCTGGGAGTCGCTGGCATTGGAGGGTCCAGCCCAAGGGGCCAGACACTTATGGAGACCTaGTACTTGATGGTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: PQGLLGVAGIGGSSPRGQTLMET*YLMVEN
Trigger: GTTCTCCACCATCAAGTACAAGGTCTCCATAAGTGT...CTGGCCCCTTGGGCTGGACCCTCCAATGCCAGCGACTCCCAGGAGCCCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAATGGAGACCTTGTACTaGATGGTGGAGAACAGGTGC +
Preference number: 5 (lower is better)
Translates to: AAGPGPPGSPQIVSEENAMETLY*MVENRC
Trigger: GCACCTGTTCTCCACCATCAAGTACAAGGTCTCCAT...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp GGAGGAGAAATCGGATGTGAGAGGCTCCCCTCACGTCCCCCAAGGGCTCCTGGGCCAATCTCATTGTCCTaGGCTGCCACCTGGATAATG +
Preference number: 5 (lower is better)
Translates to: GGEIGCERLPSRPPRAPGPISLS*AATWIM
Trigger: CATTATCCAGGTGGCAGCCAAGGACAATGAGATTGG...CCCAGGAGCCCTTGGGGGACGTGAGGGGAGCCTCTCACATCCGATTTCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS GCA 90 bp CTGGATAATGTACTCCTTCCCGGCGTAGGCATCTGTGATGGTGTGTaGTGTGCCGTCGGACAGCTCCACATGCTGCCACTGGTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: LDNVLLPGVGICDGV*CAVGQLHMLPLVQD
Trigger: ATCCTGGACCAGTGGCAGCATGTGGAGCTGTCCGACGGCACAGCACACACCATCACAGATGCCTACGCCGGGAAGGAGTACATTATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp GCGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCACGGGGTCTCCACAAATaGTGTCTGAAGAGAATGCAA +
Preference number: 5 (lower is better)
Translates to: AAGPGPPGSPQIVSEENARGLHK*CLKRMQ
Trigger: TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG...TGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCAGGGTGAGGGGGTCTTaGGTGGGTGGGTTAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PPGSPQIVSEENAKGPPARVRGS*VGGLAA
Trigger: TGCAGCTAACCCACCCACCAAAGACCCCCTCACCCT...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGCCGCAGCATCCCAGTTaGCTGTCCCACATGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVPQHPS*LSHMAV
Trigger: CACTGCCATGTGGGACAGCAAACTGGGATGCTGCGG...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAATCACAGACCATAATTTaGGAGCCATGCAGCACAGTC +
Preference number: 5 (lower is better)
Translates to: RQARARRGLHKLCLKRMQSQTII*EPCSTV
Trigger: GACTGTGCTGCATGGCTCCAAAATTATGGTCTGTGA...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCATGTGGCAGCGGTTCTaGAGGGCTGGGTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAMWQRF*RAGSFS
Trigger: TGAGAAGGACCCAGCCCTCAAGAACCGCTGCCACAT...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGAGGGTGAGGGGGTCTTaGGTGGGTGGGTTAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVRVRGS*VGGLAA
Trigger: TGCAGCTAACCCACCCACCAAAGACCCCCTCACCCT...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGCAGGCCCGGGCCCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAACACTTATGGAGACCTaGTACTTGATGGTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: RQARARRGLHKLCLKRMQTLMET*YLMVEN
Trigger: GTTCTCCACCATCAAGTACAAGGTCTCCATAAGTGT...TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGGGCCCGGGCCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS GCA 90 bp GGCTACGCTCCAGTCACTCCATGTCCCAATCTCATTGTCCTTGGCTaGCACCTGGATAATGTACTCCTTCCCGGCGTAGGCATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: GYAPVTPCPNLIVLG*HLDNVLLPGVGICD
Trigger: ATCACAGATGCCTACGCCGGGAAGGAGTACATTATCCAGGTGGCAGCCAAGGACAATGAGATTGGGACATGGAGTGACTGGAGCGTAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCCGGGGTCTCCACAAATaGTGTCTGAAGAGAATGCAA +
Preference number: 5 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLRGLHK*CLKRMQ
Trigger: TTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGATGGAGACCTTGTACTaGATGGTGGAGAACAGGTGC +
Preference number: 5 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVMETLY*MVENRC
Trigger: GCACCTGTTCTCCACCATCAAGTACAAGGTCTCCAT...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp AAAGGTCCTCCTGCCCGTGTGCAAAATAGAAACCGGGGTCTGCAGGCTCAGCTCTACAGCAAGTTACCATaGAGTCAGACTAGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: KGPPARVQNRNRGLQAQLYSKLP*SQTRRD
Trigger: GTCCCTTCTAGTCTGACTCAATGGTAACTTGCTGTA...GAGCTGAGCCTGCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CCGCCGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCTACAGCAAGTTACCATaGAGTCAGACTAGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: PPGSPQIVSEENAKGPPAYSKLP*SQTRRD
Trigger: GTCCCTTCTAGTCTGACTCAATGGTAACTTGCTGTA...GGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGACACTTATGGAGACCTaGTACTTGATGGTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVTLMET*YLMVEN
Trigger: GTTCTCCACCATCAAGTACAAGGTCTCCATAAGTGT...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS-3UTR CAA 90 bp CGGGGTCTCCACAAATTGTGTCTGAAGAGAATGCAAAAGGTCCTCCTGCCCGTGTACAGCAAGTTACCATaGAGTCAGACTAGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: RGLHKLCLKRMQKVLLPVYSKLP*SQTRRD
Trigger: GTCCCTTCTAGTCTGACTCAATGGTAACTTGCTGTA...CACGGGCAGGAGGACCTTTTGCATTCTCTTCAGACACAATTTGTGGAGACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS CCA 72 bp TCCCGCGGCGGCAAGCCCACATGCAGCAGGACTTGGTaGCGCAGGTGCCAGGAGTCACGGTGGAAGCAGGCG +
Preference number: 6 (lower is better)
Translates to: SRGGKPTCSRTW*RRCQESRWKQA
Trigger: CGCCTGCTTCCACCGTGACTCCTGGCACCTGCGCCACCAAGTCCTGCTGCATGTGGGCTTGCCGCCGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CCA 72 bp GGCTCCCGCGGCGGCAAGCCCACATGCAGCAGGACTTaGTGGCGCAGGTGCCAGGAGTCACGGTGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: GSRGGKPTCSRT*WRRCQESRWKQ
Trigger: CTGCTTCCACCGTGACTCCTGGCACCTGCGCCACCAAGTCCTGCTGCATGTGGGCTTGCCGCCGCGGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CAA 90 bp GGCCAGGTCGAGGGGGTCTGCCACGTCACCTCCAGCCGGCGAGGGTaGCTGGGCACTGGCCGGGCTACCACATTTTCTGGAGGATCAGGC +
Preference number: 6 (lower is better)
Translates to: GQVEGVCHVTSSRRG*LGTGRATTFSGGSG
Trigger: GCCTGATCCTCCAGAAAATGTGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGAGGTGACGTGGCAGACCCCCTCGACCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS GCA 72 bp GGAAAAGACTCAGGGTCAGGCCAGGTCGAGGGGGTCTaGCACGTCACCTCCAGCCGGCGAGGGTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GKDSGSGQVEGV*HVTSSRRGLLG
Trigger: GCCCAGCAACCCTCGCCGGCTGGAGGTGACGTGGCAGACCCCCTCGACCTGGCCTGACCCTGAGTCTTTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CAA 72 bp AGGCTCCCGCGGCGGCAAGCCCACATGCAGCAGGACTaGGTGGCGCAGGTGCCAGGAGTCACGGTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: RLPRRQAHMQQD*VAQVPGVTVEA
Trigger: TGCTTCCACCGTGACTCCTGGCACCTGCGCCACCAAGTCCTGCTGCATGTGGGCTTGCCGCCGCGGGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS GCA 72 bp TGCCTCCTGTGGACTGTGTCTCTGGGCGTAGACAACTaGGGCGGCGGCGGCAAGCACAGCACAGCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: CLLWTVSLGVDN*GGGGKHSTAGP
Trigger: TGGGCCTGCTGTGCTGTGCTTGCCGCCGCCGCCGCAGTTGTCTACGCCCAGAGACACAGTCCACAGGAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS GCA 72 bp AGGGGGTCTGCCACGTCACCTCCAGCCGGCGAGGGTTaGTGGGCACTGGCCGGGCTACCACATTTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: RGSATSPPAGEG*WALAGLPHFLE
Trigger: CTCCAGAAAATGTGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGAGGTGACGTGGCAGACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CAA 72 bp GAGGGGGTCTGCCACGTCACCTCCAGCCGGCGAGGGTaGCTGGGCACTGGCCGGGCTACCACATTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: EGVCHVTSSRRG*LGTGRATTFSG
Trigger: TCCAGAAAATGTGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGAGGTGACGTGGCAGACCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CCA 72 bp GGGTCTGCCACGTCACCTCCAGCCGGCGAGGGTTGCTaGGCACTGGCCGGGCTACCACATTTTCTGGAGGAT +
Preference number: 6 (lower is better)
Translates to: GSATSPPAGEGC*ALAGLPHFLED
Trigger: ATCCTCCAGAAAATGTGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGAGGTGACGTGGCAGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS TCA 72 bp AGTAGAAGCCCTTGGGGTAAGTGTTGGAGCGGCAGCTaGGCACAGGCTCCCGCGGCGGCAAGCCCACATGCA +
Preference number: 6 (lower is better)
Translates to: SRSPWGKCWSGS*AQAPAAASPHA
Trigger: TGCATGTGGGCTTGCCGCCGCGGGAGCCTGTGCTCAGCTGCCGCTCCAACACTTACCCCAAGGGCTTCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CCA 72 bp CCACGTCACCTCCAGCCGGCGAGGGTTGCTGGGCACTaGCCGGGCTACCACATTTTCTGGAGGATCAGGCTT +
Preference number: 6 (lower is better)
Translates to: PRHLQPARVAGH*PGYHIFWRIRL
Trigger: AAGCCTGATCCTCCAGAAAATGTGGTAGCCCGGCCAGTGCCCAGCAACCCTCGCCGGCTGGAGGTGACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CCA 72 bp GTGAGGTGTCGCGGTTCCTCAGTCCAGGGCGTAGCGTaGGCGGCTACGCTCCAGTCACTCCATGTCCCAATC +
Preference number: 6 (lower is better)
Translates to: VRCRGSSVQGVA*AATLQSLHVPI
Trigger: GATTGGGACATGGAGTGACTGGAGCGTAGCCGCCCACGCTACGCCCTGGACTGAGGAACCGCGACACCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS CAA 90 bp CCAGGTCTGTCCCATTTACCCGCCACGTCACCGCAGCATCCCAGTTaGCTGTCCCACATGGCAGTGTCACGTCAGAGCCCAGGCGCTCGT +
Preference number: 6 (lower is better)
Translates to: PGLSHLPATSPQHPS*LSHMAVSRQSPGAR
Trigger: ACGAGCGCCTGGGCTCTGACGTGACACTGCCATGTGGGACAGCAAACTGGGATGCTGCGGTGACGTGGCGGGTAAATGGGACAGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS TCA 72 bp CCAGTTCCAGGCCATGGAGCACCAGCTGAGAGCCGTTaGGCAGGTCAGGGGCCAGGTCTGTCCCATTTACCC +
Preference number: 6 (lower is better)
Translates to: PVPGHGAPAESR*AGQGPGLSHLP
Trigger: GGGTAAATGGGACAGACCTGGCCCCTGACCTGCTCAACGGCTCTCAGCTGGTGCTCCATGGCCTGGAACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS GCA 72 bp CATGGCAGTGTCACGTCAGAGCCCAGGCGCTCGTACTaGACATGGGGTGCCTCCTGTGGACTGTGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: HGSVTSEPRRSY*TWGASCGLCLW
Trigger: CCAGAGACACAGTCCACAGGAGGCACCCCATGTGCAGTACGAGCGCCTGGGCTCTGACGTGACACTGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CCA 72 bp CCACGTCACCGCAGCATCCCAGTTTGCTGTCCCACATaGCAGTGTCACGTCAGAGCCCAGGCGCTCGTACTG +
Preference number: 6 (lower is better)
Translates to: PRHRSIPVCCPT*QCHVRAQALVL
Trigger: CAGTACGAGCGCCTGGGCTCTGACGTGACACTGCCATGTGGGACAGCAAACTGGGATGCTGCGGTGACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS GCA 72 bp CCCATTTACCCGCCACGTCACCGCAGCATCCCAGTTTaGTGTCCCACATGGCAGTGTCACGTCAGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: PIYPPRHRSIPV*CPTWQCHVRAQ
Trigger: CTGGGCTCTGACGTGACACTGCCATGTGGGACAGCAAACTGGGATGCTGCGGTGACGTGGCGGGTAAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS GCA 72 bp GTACTCCTTCCCGGCGTAGGCATCTGTGATGGTGTGTaGTGTGCCGTCGGACAGCTCCACATGCTGCCACTG +
Preference number: 6 (lower is better)
Translates to: VLLPGVGICDGV*CAVGQLHMLPL
Trigger: CAGTGGCAGCATGTGGAGCTGTCCGACGGCACAGCACACACCATCACAGATGCCTACGCCGGGAAGGAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS GCA 72 bp TGTTGGGAATGTAGGTGGGGGTGGGCAGATGCCAGCTaGAGTAGAAGCCCTTGGGGTAAGTGTTGGAGCGGC +
Preference number: 6 (lower is better)
Translates to: CWECRWGWADAS*SRSPWGKCWSG
Trigger: GCCGCTCCAACACTTACCCCAAGGGCTTCTACTGCAGCTGGCATCTGCCCACCCCCACCTACATTCCCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS CAA 72 bp TCCCATTTACCCGCCACGTCACCGCAGCATCCCAGTTaGCTGTCCCACATGGCAGTGTCACGTCAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: SHLPATSPQHPS*LSHMAVSRQSP
Trigger: TGGGCTCTGACGTGACACTGCCATGTGGGACAGCAAACTGGGATGCTGCGGTGACGTGGCGGGTAAATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4
CDS TCA 72 bp CAACTCTTCAGGACTTCCAAAACCAAGGGGGCAAGATaGGGTGACAAGGCTAGAGTCGCGCCCTCGGGCCAC +
Preference number: 6 (lower is better)
Translates to: QLFRTSKTKGAR*GDKARVAPSGH
Trigger: GTGGCCCGAGGGCGCGACTCTAGCCTTGTCACCTCATCTTGCCCCCTTGGTTTTGGAAGTCCTGAAGAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378980.8
CDS TCA 72 bp CAACTCTTCAGGACTTCCAAAACCAAGGGGGCAAGATaGGGTGACAAGGCTAGAGTCCTTTCTCGGGCGCGC +
Preference number: 6 (lower is better)
Translates to: QLFRTSKTKGAR*GDKARVLSRAR
Trigger: GCGCGCCCGAGAAAGGACTCTAGCCTTGTCACCTCATCTTGCCCCCTTGGTTTTGGAAGTCCTGAAGAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417345.2
ENST00000610543.4
CDS GCA 72 bp CCAGTCACTCCATGTCCCAATCTCATTGTCCTTGGCTaGCACCTGGATAATGTACTCCTTCCCGGCGTAGGC +
Preference number: 6 (lower is better)
Translates to: PVTPCPNLIVLG*HLDNVLLPGVG
Trigger: GCCTACGCCGGGAAGGAGTACATTATCCAGGTGGCAGCCAAGGACAATGAGATTGGGACATGGAGTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS CAA 72 bp ACGCTCCAGTCACTCCATGTCCCAATCTCATTGTCCTaGGCTGCCACCTGGATAATGTACTCCTTCCCGGCG +
Preference number: 6 (lower is better)
Translates to: TLQSLHVPISLS*AATWIMYSFPA
Trigger: CGCCGGGAAGGAGTACATTATCCAGGTGGCAGCCAAGGACAATGAGATTGGGACATGGAGTGACTGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000610543.4
CDS CCA 72 bp ATGGTGAACTCGTCAAAGGTGATAGCTGTGGCATTGTaGCCCAGGGCATTGCTGACACTTATGGAGACCTTG +
Preference number: 6 (lower is better)
Translates to: MVNSSKVIAVAL*PRALLTLMETL
Trigger: CAAGGTCTCCATAAGTGTCAGCAATGCCCTGGGCCACAATGCCACAGCTATCACCTTTGACGAGTTCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351266.8
ENST00000378980.8
ENST00000417345.2
ENST00000610543.4