Pregenerated sensors for CNTF (Homo sapiens)
Ensembl gene IDs: ENSG00000242689Ensembl transcript IDs: ENST00000361987.6
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTaGCAAAGAGGTGCAGTGATTCATGATCAAGCCTCTAAAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: PAMGIDYMDASSNTL*QRGAVIHDQASKVK Trigger: TTTCACTTTAGAGGCTTGATCATGAATCACTGCACCTCTTTGTCACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTTCCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTGGAAGGACGTTGTCCCTaGTCCCACTCTCTTACACCT | + |
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Preference number: 2 (lower is better) Translates to: LFSSDGNRLHGCIFQHPVEGRCP*SHSLTP Trigger: AGGTGTAAGAGAGTGGGAGCAGGGACAACGTCCTTC...CACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGGAAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR GCA 90 bp | CAAAATGGAATCTTAAGATCTCCAGCTGCCCTCCTCACCGCCAAGTATGAACAATACACCTGCAGCACATaGAAGCACGCACACAAATCA | + |
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Preference number: 2 (lower is better) Translates to: QNGILRSPAALLTAKYEQYTCST*KHAHKS Trigger: TGATTTGTGTGCGTGCTTGCATGTGCTGCAGGTGTA...TTGTTCATACTTGGCGGTGAGGAGGGCAGCTGGAGATCTTAAGATTCCATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCTGTATTACTAAACATCCCCAGCTTCCAAAGTTCAGAAGTTTGGCGGGCGCTAAAATTTGCAACTaGCTTCTGAGGACATCTAAC | + |
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Preference number: 2 (lower is better) Translates to: PGCITKHPQLPKFRSLAGAKICN*LLRTSN Trigger: GTTAGATGTCCTCAGAAGTCAGTTGCAAATTTTAGC...GCCCGCCAAACTTCTGAACTTTGGAAGCTGGGGATGTTTAGTAATACAGCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGTATAAGCCGTGCCCAACCCAATATTTGAGAACTTTTAGTGAGTACTTACTTAAGATCTCCAGCTaGCCTCCTCACCGCCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: TWYKPCPTQYLRTFSEYLLKISS*PPHRQV Trigger: TACTTGGCGGTGAGGAGGGCAGCTGGAGATCTTAAG...TAAGTACTCACTAAAAGTTCTCAAATATTGGGTTGGGCACGGCTTATACCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTTCCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTGCAGGCTAAACTTGTATaGCCATTTGTGTATGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LFSSDGNRLHGCIFQHPVQAKLV*PFVYVS Trigger: GGAGACATACACAAATGGGCATACAAGTTTAGCCTG...CACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGGAAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTTCCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTGTTAACCAAATCTCTGTaGGCCTGTTTTCTCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: LFSSDGNRLHGCIFQHPVLTKSL*ACFLIY Trigger: GTAGATGAGAAAACAGGCTCACAGAGATTTGGTTAA...CACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGGAAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGTATAAGCCGTGCCCAACCCAATATTTGAGAACTTTTAGTGAGTACTTAGGAGTAACACCACCTTaGTCACAAGGTTGTAAACGC | + |
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Preference number: 2 (lower is better) Translates to: TWYKPCPTQYLRTFSEYLGVTPP*SQGCKR Trigger: GCGTTTACAACCTTGTGAGCAAGGTGGTGTTACTCC...TAAGTACTCACTAAAAGTTCTCAAATATTGGGTTGGGCACGGCTTATACCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTGAGCTTAACCAAATCTCTGTGAGCCTGTTTTCTCATCTACCTAATGGGAGTCTGATTTTAAATTaGATCTTCTCAGACCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LCELNQISVSLFSHLPNGSLILN*IFSDRV Trigger: GACTCGGTCTGAGAAGATTCAATTTAAAATCAGACT...CCCATTAGGTAGATGAGAAAACAGGCTCACAGAGATTTGGTTAAGCTCACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR CAA 90 bp | GACGTTGTCCCTGCTCCCACTCTCTTACACCTGCAGCACATGCAAGCACGCACATGTCTCCAACGCTACTaGATGAAAATACCTGTAGTC | + |
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Preference number: 3 (lower is better) Translates to: DVVPAPTLLHLQHMQARTCLQRY*MKIPVV Trigger: GACTACAGGTATTTTCATCAAGTAGCGTTGGAGACA...TGTGCGTGCTTGCATGTGCTGCAGGTGTAAGAGAGTGGGAGCAGGGACAACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR-3UTR CAA 90 bp | GACGTTGTCCCTGCTCCCACTCTCTTACACCTGCAGCACATGCAAGCACGCACAAACTTGTATGCCCATTaGTGTATGTCTCCAACGCTA | + |
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Preference number: 3 (lower is better) Translates to: DVVPAPTLLHLQHMQARTNLYAH*CMSPTL Trigger: TAGCGTTGGAGACATACACAAATGGGCATACAAGTT...TGTGCGTGCTTGCATGTGCTGCAGGTGTAAGAGAGTGGGAGCAGGGACAACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR CCA 72 bp | GTTCAGAAGTTTGGCGGGCCTAATCATTTTCCAAAATaGAATCTTAAGATCTCCAGCTGCCCTCCTCACCGC | + |
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Preference number: 3 (lower is better) Translates to: VQKFGGPNHFPK*NLKISSCPPHR Trigger: GCGGTGAGGAGGGCAGCTGGAGATCTTAAGATTCCATTTTGGAAAATGATTAGGCCCGCCAAACTTCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR TCA 72 bp | GGAATAGATTACATGGATGCATCTTCCAACACCCTGTaGCAAAGAGGTGCAGTGATTCATGATCAAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GIDYMDASSNTL*QRGAVIHDQAS Trigger: AGAGGCTTGATCATGAATCACTGCACCTCTTTGTCACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR TCA 72 bp | CTTAAGATCTCCAGCTGCCCTCCTCACCGCCAAGTATaGACAATAAATCCTGACTTTAACGCTAAAATTTGC | + |
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Preference number: 3 (lower is better) Translates to: LKISSCPPHRQV*TINPDFNAKIC Trigger: GCAAATTTTAGCGTTAAAGTCAGGATTTATTGTTCATACTTGGCGGTGAGGAGGGCAGCTGGAGATCTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR CCA 72 bp | ACACTGCCTGCATCACTAATTAAAAGTGAGGTAACCTaGTATAAGCCGTGCCCAACCCAATATTTGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: TLPASLIKSEVT*YKPCPTQYLRT Trigger: AGTTCTCAAATATTGGGTTGGGCACGGCTTATACCAGGTTACCTCACTTTTAATTAGTGATGCAGGCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR TCA 72 bp | CTACTTGTTAGCTGTGTGAGCTTAACCAAATCTCTGTaGGCCTGTTTTCTCATCTACCTAATGGGAGTAACA | + |
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Preference number: 3 (lower is better) Translates to: LLVSCVSLTKSL*ACFLIYLMGVT Trigger: TGTTACTCCCATTAGGTAGATGAGAAAACAGGCTCACAGAGATTTGGTTAAGCTCACACAGCTAACAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR TCA 72 bp | ACAATAAATCCTGACTTTAACGCTAAAATTTGCAACTaGCTTCTGAGGACATCTAACAGCAGCTGTTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: TINPDFNAKICN*LLRTSNSSCFP Trigger: TGGAAAACAGCTGCTGTTAGATGTCCTCAGAAGTCAGTTGCAAATTTTAGCGTTAAAGTCAGGATTTATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | GGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGGGGGTCAGCGGTGAATaGTCTGTGAAAGCCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: GKARPQGTTHIPLEEKARGVSGE*SVKAIP Trigger: AGGGATGGCTTTCACAGAGCATTCACCGCTGACCCC...CCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | GGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGCACTCCACTGATCAGTaGTTGCCACTGGCATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: GKARPQGTTHIPLEEKARHSTDQ*LPLASH Trigger: ATGGGATGCCAGTGGCAAGCACTGATCAGTGGAGTG...CCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | GACGTTGTCCCTGCTCCCACTCTCTTACACCTGCAGCACATGCAAGCACGCACAGCAAAGGCAGCGACTTaGAGAAGAAGGGTATGTATA | + |
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Preference number: 4 (lower is better) Translates to: DVVPAPTLLHLQHMQARTAKAAT*RRRVCI Trigger: TATACATACCCTTCTTCTCCAAGTCGCTGCCTTTGC...TGTGCGTGCTTGCATGTGCTGCAGGTGTAAGAGAGTGGGAGCAGGGACAACGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | GCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAAGAGAATGGCTCCCACGTGCTaGGATCCCAGTCTGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: ARPQGTTHIPLEEKARKRMAPTC*DPSLMR Trigger: TCTCATCAGACTGGGATCCCAGCACGTGGGAGCCAT...TCTCTTCCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | ACCTGGTATAAGCCGTGCCCAACCCAATATTTGAGAACTTTTAGTGAGTACTTACAGAGGTCCCGACGGTaGGGGGTCAGCGGTGAATGC | + |
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Preference number: 4 (lower is better) Translates to: TWYKPCPTQYLRTFSEYLQRSRR*GVSGEC Trigger: GCATTCACCGCTGACCCCTCACCGTCGGGACCTCTG...TAAGTACTCACTAAAAGTTCTCAAATATTGGGTTGGGCACGGCTTATACCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | CTGTTTTCCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTGGTCAGCTCACTCCACTaGTCAGTGCTTGCCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: LFSSDGNRLHGCIFQHPVVSSLH*SVLATG Trigger: GCCAGTGGCAAGCACTGATCAGTGGAGTGAGCTGAC...CACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGGAAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | GGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGGGGGTAAAATGCACCTaGTGGTCTTCTAAGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GKARPQGTTHIPLEEKARGVKCT*WSSKSL Trigger: CAGGCTCTTAGAAGACCAGCAGGTGCATTTTACCCC...CCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | TGGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGATAATGGCTCCCACGTaGTGGGATCCCAGTCTGATG | + |
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Preference number: 4 (lower is better) Translates to: WESEAPGNYAYSIRRESKIMAPT*WDPSLM Trigger: CATCAGACTGGGATCCCAGCACGTGGGAGCCATTAT...CTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGTATTACTAAACATCCCCAGCTTCCAAAGTTCAGAAGTTTGGCGGGCCCACTCTCTTACACCTaGAGCACATGCAAGCACGCA | + |
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Preference number: 4 (lower is better) Translates to: PGCITKHPQLPKFRSLAGPLSYT*STCKHA Trigger: TGCGTGCTTGCATGTGCTGCAGGTGTAAGAGAGTGG...GCCCGCCAAACTTCTGAACTTTGGAAGCTGGGGATGTTTAGTAATACAGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGTATTACTAAACATCCCCAGCTTCCAAAGTTCAGAAGTTTGGCGGGCCTTAAGATCTCCAGCTaGCCTCCTCACCGCCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: PGCITKHPQLPKFRSLAGLKISS*PPHRQV Trigger: TACTTGGCGGTGAGGAGGGCAGCTGGAGATCTTAAG...GCCCGCCAAACTTCTGAACTTTGGAAGCTGGGGATGTTTAGTAATACAGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | GCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAAGAGAGAAAGGTTAGAACCCTaGAGTGGAAGGACGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ARPQGTTHIPLEEKARKRERLEP*SGRTLS Trigger: GGACAACGTCCTTCCACTTCAGGGTTCTAACCTTTC...TCTCTTCCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | CTGTGTGAGCTTAACCAAATCTCTGTGAGCCTGTTTTCTCATCTACCTAATGGGCTCTTGGAGTCGCTCTaGCTCGGTCAGCTCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: LCELNQISVSLFSHLPNGLLESL*LGQLTP Trigger: TGGAGTGAGCTGACCGAGGCAGAGCGACTCCAAGAG...CCCATTAGGTAGATGAGAAAACAGGCTCACAGAGATTTGGTTAAGCTCACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | CAAAATGGAATCTTAAGATCTCCAGCTGCCCTCCTCACCGCCAAGTATGAACAACACTGTGAAAGCTCCTaGAGCACCTTTAGGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QNGILRSPAALLTAKYEQHCESS*STFRPH Trigger: GTGGGGCCTAAAGGTGCTGCAGGAGCTTTCACAGTG...TTGTTCATACTTGGCGGTGAGGAGGGCAGCTGGAGATCTTAAGATTCCATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | ATGTCTCCAACGCTACTTGATGAAAATACCTGTAGTCCTTCAACAGGCTGCAGGATCAGTGCTTGCCACTaGCATCCCATCCGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: MSPTLLDENTCSPSTGCRISACH*HPIRRV Trigger: GACTCTGCGGATGGGATGCCAGTGGCAAGCACTGAT...CCTGCAGCCTGTTGAAGGACTACAGGTATTTTCATCAAGTAGCGTTGGAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGTATTACTAAACATCCCCAGCTTCCAAAGTTCAGAAGTTTGGCGGGCGTTAGAACCCTGAAGTaGAAGGACGTTGTCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PGCITKHPQLPKFRSLAGVRTLK*KDVVPA Trigger: AGCAGGGACAACGTCCTTCCACTTCAGGGTTCTAAC...GCCCGCCAAACTTCTGAACTTTGGAAGCTGGGGATGTTTAGTAATACAGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | GCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAAGAGATCTTCCAACACCCTGTaGCAAAGAGGTGCAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: ARPQGTTHIPLEEKARKRSSNTL*QRGAVI Trigger: AATCACTGCACCTCTTTGTCACAGGGTGTTGGAAGA...TCTCTTCCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | GCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAAGAGAAGGGTATGTATAGCTTaGTGGAAGTCACCTTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: ARPQGTTHIPLEEKARKRRVCIA*WKSPSV Trigger: AACCGAAGGTGACTTCCATCAAGCTATACATACCCT...TCTCTTCCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | CTGTGTGAGCTTAACCAAATCTCTGTGAGCCTGTTTTCTCATCTACCTAATGGGCCTTACTGTCCACTGTaGAAGCTCCTGCAGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: LCELNQISVSLFSHLPNGPYCPL*KLLQHL Trigger: AAGGTGCTGCAGGAGCTTTCACAGTGGACAGTAAGG...CCCATTAGGTAGATGAGAAAACAGGCTCACAGAGATTTGGTTAAGCTCACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | CTGTGTGAGCTTAACCAAATCTCTGTGAGCCTGTTTTCTCATCTACCTAATGGGGAAGGACGTTGTCCCTaGTCCCACTCTCTTACACCT | + |
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Preference number: 4 (lower is better) Translates to: LCELNQISVSLFSHLPNGEGRCP*SHSLTP Trigger: AGGTGTAAGAGAGTGGGAGCAGGGACAACGTCCTTC...CCCATTAGGTAGATGAGAAAACAGGCTCACAGAGATTTGGTTAAGCTCACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | GCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAAGAGAATGAAACGAAGGTCATaGATGGACCTTACTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ARPQGTTHIPLEEKARKRMKRRS*MDLTVH Trigger: GTGGACAGTAAGGTCCATCCATGACCTTCGTTTCAT...TCTCTTCCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | TGGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGTTGTCCACAAATGCTTaGGTTACACTGCCTGCATCA | + |
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Preference number: 4 (lower is better) Translates to: WESEAPGNYAYSIRRESKLSTNA*VTLPAS Trigger: TGATGCAGGCAGTGTAACCCAAGCATTTGTGGACAA...CTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | ACCTGGTATAAGCCGTGCCCAACCCAATATTTGAGAACTTTTAGTGAGTACTTACCGCAGAGTCCAGGTTaGTGTTCTTGTTCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TWYKPCPTQYLRTFSEYLPQSPG*CSCSGP Trigger: AGGGCCTGAACAAGAACATCAACCTGGACTCTGCGG...TAAGTACTCACTAAAAGTTCTCAAATATTGGGTTGGGCACGGCTTATACCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | AGACCGAGTCATCCAGGACTAGAATTAACATATGTATATTCTGTCTGTAAGGCACCACTGATCAGTGCTTaGCACTGGCATCCCATCCGC | + |
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Preference number: 4 (lower is better) Translates to: RPSHPGLELTYVYSVCKAPLISA*HWHPIR Trigger: GCGGATGGGATGCCAGTGGCAAGCACTGATCAGTGG...TGCCTTACAGACAGAATATACATATGTTAATTCTAGTCCTGGATGACTCGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | CTGTTTTCCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTGTACACCTGCAGCACATaGAAGCACGCACACAAATCA | + |
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Preference number: 4 (lower is better) Translates to: LFSSDGNRLHGCIFQHPVYTCST*KHAHKS Trigger: TGATTTGTGTGCGTGCTTGCATGTGCTGCAGGTGTA...CACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGGAAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | CTGTTTTCCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTGGGAGTAACACCACCTTaGTCACAAGGTTGTAAACGC | + |
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Preference number: 4 (lower is better) Translates to: LFSSDGNRLHGCIFQHPVGVTPP*SQGCKR Trigger: GCGTTTACAACCTTGTGAGCAAGGTGGTGTTACTCC...CACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGGAAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | ATGTCTCCAACGCTACTTGATGAAAATACCTGTAGTCCTTCAACAGGCTGCAGGAAAAGTGAGGTAACCTaGTATAAGCCGTGCCCAACC | + |
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Preference number: 4 (lower is better) Translates to: MSPTLLDENTCSPSTGCRKSEVT*YKPCPT Trigger: GGTTGGGCACGGCTTATACCAGGTTACCTCACTTTT...CCTGCAGCCTGTTGAAGGACTACAGGTATTTTCATCAAGTAGCGTTGGAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | AGGCTAAACTTGTATGCCCATTTGTGTATGTCTCCAACGCTACTTGATGAAAATGTGAGGGGTCAGCGGTaGATGCTCTGTGAAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RLNLYAHLCMSPTLLDENVRGQR*MLCESH Trigger: ATGGCTTTCACAGAGCATTCACCGCTGACCCCTCAC...ATTTTCATCAAGTAGCGTTGGAGACATACACAAATGGGCATACAAGTTTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | GGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAGTCTGATTTTAAATTaGATCTTCTCAGACCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GKARPQGTTHIPLEEKARSLILN*IFSDRV Trigger: GACTCGGTCTGAGAAGATTCAATTTAAAATCAGACT...CCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | TGGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGCTAAAATTTGCAACTaGCTTCTGAGGACATCTAAC | + |
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Preference number: 4 (lower is better) Translates to: WESEAPGNYAYSIRRESKAKICN*LLRTSN Trigger: GTTAGATGTCCTCAGAAGTCAGTTGCAAATTTTAGC...CTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | GCTTCCAAAGTTCAGAAGTTTGGCGGGCCTAATCATTTTCCAAAATGGAATCTTCTCCTCTATCTGGTATaGAAAGGCAGCGACTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASKVQKFGGPNHFPKWNLLLYLV*KGSDLE Trigger: CTCCAAGTCGCTGCCTTTGCATACCAGATAGAGGAG...AAGATTCCATTTTGGAAAATGATTAGGCCCGCCAAACTTCTGAACTTTGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | AGGCTAAACTTGTATGCCCATTTGTGTATGTCTCCAACGCTACTTGATGAAAATGCGGTGAATGCTCTGTaGAAGCCATCCCTTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLNLYAHLCMSPTLLDENAVNAL*KPSLNS Trigger: TGAGTTAAGGGATGGCTTTCACAGAGCATTCACCGC...ATTTTCATCAAGTAGCGTTGGAGACATACACAAATGGGCATACAAGTTTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | ATGTCTCCAACGCTACTTGATGAAAATACCTGTAGTCCTTCAACAGGCTGCAGGGCCCAACCCAATATTTaGGAACTTTTAGTGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: MSPTLLDENTCSPSTGCRAQPNI*ELLVST Trigger: AGTACTCACTAAAAGTTCTCAAATATTGGGTTGGGC...CCTGCAGCCTGTTGAAGGACTACAGGTATTTTCATCAAGTAGCGTTGGAGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | AGGCTAAACTTGTATGCCCATTTGTGTATGTCTCCAACGCTACTTGATGAAAATGTAAAATGCACCTGCTaGTCTTCTAAGAGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLNLYAHLCMSPTLLDENVKCTC*SSKSLA Trigger: GGCCAGGCTCTTAGAAGACCAGCAGGTGCATTTTAC...ATTTTCATCAAGTAGCGTTGGAGACATACACAAATGGGCATACAAGTTTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | AGGCTAAACTTGTATGCCCATTTGTGTATGTCTCCAACGCTACTTGATGAAAATGAAGTCACCTTCGGTTaGGGTAAAATGCACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLNLYAHLCMSPTLLDENEVTFG*GKMHLL Trigger: CAGCAGGTGCATTTTACCCCAACCGAAGGTGACTTC...ATTTTCATCAAGTAGCGTTGGAGACATACACAAATGGGCATACAAGTTTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | ACCTGGTATAAGCCGTGCCCAACCCAATATTTGAGAACTTTTAGTGAGTACTTAAACGAAGGTCATGGATaGACCTTACTGTCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TWYKPCPTQYLRTFSEYLNEGHG*TLLSTV Trigger: CACAGTGGACAGTAAGGTCCATCCATGACCTTCGTT...TAAGTACTCACTAAAAGTTCTCAAATATTGGGTTGGGCACGGCTTATACCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| 3UTR CAA 72 bp | ACTTGTATGCCCATTTGTGTATGTCTCCAACGCTACTaGATGAAAATACCTGTAGTCCTTCAACAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TCMPICVCLQRY*MKIPVVLQQAA Trigger: TGCAGCCTGTTGAAGGACTACAGGTATTTTCATCAAGTAGCGTTGGAGACATACACAAATGGGCATACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | CTGTTTTCCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTGCTTTTACAAGGAGAATaGTCTGTGTTCAAACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFSSDGNRLHGCIFQHPVLLQGE*SVFKLS Trigger: ACTGAGTTTGAACACAGATCATTCTCCTTGTAAAAG...CACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGGAAAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | AGACCGAGTCATCCAGGACTAGAATTAACATATGTATATTCTGTCTGTAAGGCAGACAAAGAGGTGCAGTaGTTCATGATCAAGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RPSHPGLELTYVYSVCKADKEVQ*FMIKPL Trigger: TAGAGGCTTGATCATGAATCACTGCACCTCTTTGTC...TGCCTTACAGACAGAATATACATATGTTAATTCTAGTCCTGGATGACTCGGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | GCTTCCAAAGTTCAGAAGTTTGGCGGGCCTAATCATTTTCCAAAATGGAATCTTCCTCACCGCCAAGTATaGACAATAAATCCTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASKVQKFGGPNHFPKWNLPHRQV*TINPDF Trigger: AAAGTCAGGATTTATTGTTCATACTTGGCGGTGAGG...AAGATTCCATTTTGGAAAATGATTAGGCCCGCCAAACTTCTGAACTTTGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | CAAAATGGAATCTTAAGATCTCCAGCTGCCCTCCTCACCGCCAAGTATGAACAAAGAGAAGGGACTAACTaGTACATTTTCTTGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QNGILRSPAALLTAKYEQREGTN*YIFLLL Trigger: TAACAACAAGAAAATGTAGCAGTTAGTCCCTTCTCT...TTGTTCATACTTGGCGGTGAGGAGGGCAGCTGGAGATCTTAAGATTCCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | AGGCTAAACTTGTATGCCCATTTGTGTATGTCTCCAACGCTACTTGATGAAAATTTTAGAAATTTAAGATaGGAAAGCGAGGCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLNLYAHLCMSPTLLDENFRNLR*ESEAPG Trigger: CCCTGGGGCCTCGCTTTCCCATCTTAAATTTCTAAA...ATTTTCATCAAGTAGCGTTGGAGACATACACAAATGGGCATACAAGTTTAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR TCA 90 bp | GCTTCCAAAGTTCAGAAGTTTGGCGGGCCTAATCATTTTCCAAAATGGAATCTTATCAAGCCTCTAAAGTaGAAGGCACATAGGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ASKVQKFGGPNHFPKWNLIKPLK*KAHRLL Trigger: TAAAAGCCTATGTGCCTTTCACTTTAGAGGCTTGAT...AAGATTCCATTTTGGAAAATGATTAGGCCCGCCAAACTTCTGAACTTTGGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR GCA 90 bp | AGGCTAAACTTGTATGCCCATTTGTGTATGTCTCCAACGCTACTTGATGAAAATCAGGCTAAACTTGTATaGCCATTTGTGTATGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLNLYAHLCMSPTLLDENQAKLV*PFVYVS Trigger: GGAGACATACACAAATGGGCATACAAGTTTAGCCTG...ATTTTCATCAAGTAGCGTTGGAGACATACACAAATGGGCATACAAGTTTAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | GCTTCCAAAGTTCAGAAGTTTGGCGGGCCTAATCATTTTCCAAAATGGAATCTTAGGAAACAAGTCAGCTaGGTTTACTTCTGTCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: ASKVQKFGGPNHFPKWNLRKQVS*VYFCLY Trigger: GTATAGACAGAAGTAAACCCAGCTGACTTGTTTCCT...AAGATTCCATTTTGGAAAATGATTAGGCCCGCCAAACTTCTGAACTTTGGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CCA 90 bp | AGACCGAGTCATCCAGGACTAGAATTAACATATGTATATTCTGTCTGTAAGGCAATTAACTCCTCTATCTaGTATGCAAAGGCAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: RPSHPGLELTYVYSVCKAINSSI*YAKAAT Trigger: AGTCGCTGCCTTTGCATACCAGATAGAGGAGTTAAT...TGCCTTACAGACAGAATATACATATGTTAATTCTAGTCCTGGATGACTCGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CCA 90 bp | TCGCTCTGCCTCGGTCAGCTCACTCCACTGATCAGTGCTTGCCACTaGCATCCCATCCGCAGAGTCCAGGTTGATGTTCTTGTTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLCLGQLTPLISACH*HPIRRVQVDVLVQA Trigger: GGCCTGAACAAGAACATCAACCTGGACTCTGCGGATGGGATGCCAGTGGCAAGCACTGATCAGTGGAGTGAGCTGACCGAGGCAGAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 90 bp | CCAGATAGAGCGGCTACAGAGGTCCCGACGGTGAGGGGTCAGCGGTaGATGCTCTGTGAAAGCCATCCCTTAACTCAACTGTCCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PDRAATEVPTVRGQR*MLCESHPLTQLSQE Trigger: TTCCTGGGACAGTTGAGTTAAGGGATGGCTTTCACAGAGCATTCACCGCTGACCCCTCACCGTCGGGACCTCTGTAGCCGCTCTATCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 90 bp | GGCTACAGAGGTCCCGACGGTGAGGGGTCAGCGGTGAATGCTCTGTaGAAGCCATCCCTTAACTCAACTGTCCCAGGAAACAAGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYRGPDGEGSAVNAL*KPSLNSTVPGNKSA Trigger: AGCTGACTTGTTTCCTGGGACAGTTGAGTTAAGGGATGGCTTTCACAGAGCATTCACCGCTGACCCCTCACCGTCGGGACCTCTGTAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS GCA 90 bp | TTGGAGTCGCTCTGCCTCGGTCAGCTCACTCCACTGATCAGTGCTTaGCACTGGCATCCCATCCGCAGAGTCCAGGTTGATGTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LESLCLGQLTPLISA*HWHPIRRVQVDVLV Trigger: AACAAGAACATCAACCTGGACTCTGCGGATGGGATGCCAGTGGCAAGCACTGATCAGTGGAGTGAGCTGACCGAGGCAGAGCGACTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | GGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAGCTTGAAGGTTCTCTaGGAGTCGCTCTGCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GKARPQGTTHIPLEEKARSLKVL*ESLCLG Trigger: ACCGAGGCAGAGCGACTCCAAGAGAACCTTCAAGCT...CCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS GCA 90 bp | AACATGGAAGGTACGATAAGCTTGAAGGTTCTCTTGGAGTCGCTCTaGCTCGGTCAGCTCACTCCACTGATCAGTGCTTGCCACTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NMEGTISLKVLLESL*LGQLTPLISACHWH Trigger: ATGCCAGTGGCAAGCACTGATCAGTGGAGTGAGCTGACCGAGGCAGAGCGACTCCAAGAGAACCTTCAAGCTTATCGTACCTTCCATGTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | GCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAAGAGATCCGCAGAGTCCAGGTaGATGTTCTTGTTCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARPQGTTHIPLEEKARKRSAESR*MFLFRP Trigger: GGGCCTGAACAAGAACATCAACCTGGACTCTGCGGA...TCTCTTCCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | CTCCAACGCTACTTGATGAAAATACCTGTAGTCCTTCAACAGGCTGCAGGTGGTTCCACTGATCAGTGCTaGCCACTGGCATCCCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQRYLMKIPVVLQQAAGGSTDQC*PLASHP Trigger: CGGATGGGATGCCAGTGGCAAGCACTGATCAGTGGA...ACCACCTGCAGCCTGTTGAAGGACTACAGGTATTTTCATCAAGTAGCGTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS GCA 90 bp | AAACGAAGGTCATGGATGGACCTTACTGTCCACTGTGAAAGCTCCTaGAGCACCTTTAGGCCCCACAGCTTCTTCTCAAAGAGACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: KRRSWMDLTVHCESS*STFRPHSFFSKRPP Trigger: TGGTGGTCTCTTTGAGAAGAAGCTGTGGGGCCTAAAGGTGCTGCAGGAGCTTTCACAGTGGACAGTAAGGTCCATCCATGACCTTCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 90 bp | TGGTATGCAAAGGCAGCGACTTGGAGAAGAAGGGTATGTATAGCTTaGTGGAAGTCACCTTCGGTTGGGGTAAAATGCACCTGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WYAKAATWRRRVCIA*WKSPSVGVKCTCWS Trigger: AGACCAGCAGGTGCATTTTACCCCAACCGAAGGTGACTTCCATCAAGCTATACATACCCTTCTTCTCCAAGTCGCTGCCTTTGCATACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | GCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGGAAGAGAGAAGGTACGATAAGCTaGAAGGTTCTCTTGGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARPQGTTHIPLEEKARKREGTIS*KVLLES Trigger: CGACTCCAAGAGAACCTTCAAGCTTATCGTACCTTC...TCTCTTCCTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | CTGTTTTCCAGCGATGGGAATAGATTACATGGATGCATCTTCCAACACCCTGTGATCCCATCAGCCTCATaGCGGGGGATCTTGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFSSDGNRLHGCIFQHPVIPSAS*RGILYS Trigger: GGAATACAAGATCCCCCGCAATGAGGCTGATGGGAT...CACAGGGTGTTGGAAGATGCATCCATGTAATCTATTCCCATCGCTGGAAAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 90 bp | TATAATGGCTCCCACGTGCTGGGATCCCAGTCTGATGAGAAGAAATaGAACGAAGGTCATGGATGGACCTTACTGTCCACTGTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YNGSHVLGSQSDEKK*NEGHGWTLLSTVKA Trigger: AGCTTTCACAGTGGACAGTAAGGTCCATCCATGACCTTCGTTTCATTTCTTCTCATCAGACTGGGATCCCAGCACGTGGGAGCCATTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | CCAGGCTGTATTACTAAACATCCCCAGCTTCCAAAGTTCAGAAGTTTGGCGGGCAAGGGTATGTATAGCTaGATGGAAGTCACCTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGCITKHPQLPKFRSLAGKGMYS*MEVTFG Trigger: ACCGAAGGTGACTTCCATCAAGCTATACATACCCTT...GCCCGCCAAACTTCTGAACTTTGGAAGCTGGGGATGTTTAGTAATACAGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | TGGGAAAGCGAGGCCCCAGGGAACTACGCATATTCCATTAGAAGAGAAAGCAAGTCATTGCGGGGGATCTaGTATTCCAGGAGTATCATT | + |
|
Preference number: 5 (lower is better) Translates to: WESEAPGNYAYSIRRESKSLRGI*YSRSII Trigger: AATGATACTCCTGGAATACAAGATCCCCCGCAATGA...CTTGCTTTCTCTTCTAATGGAATATGCGTAGTTCCCTGGGGCCTCGCTTTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | CTCCAACGCTACTTGATGAAAATACCTGTAGTCCTTCAACAGGCTGCAGGTGGTCCAAAGTTCAGAAGTTaGGCGGGCCTAATCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQRYLMKIPVVLQQAAGGPKFRS*AGLIIF Trigger: GAAAATGATTAGGCCCGCCAAACTTCTGAACTTTGG...ACCACCTGCAGCCTGTTGAAGGACTACAGGTATTTTCATCAAGTAGCGTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CCA 90 bp | TTGCGGGGGATCTTGTATTCCAGGAGTATCATTAACTCCTCTATCTaGTATGCAAAGGCAGCGACTTGGAGAAGAAGGGTATGTATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRGILYSRSIINSSI*YAKAATWRRRVCIA Trigger: AGCTATACATACCCTTCTTCTCCAAGTCGCTGCCTTTGCATACCAGATAGAGGAGTTAATGATACTCCTGGAATACAAGATCCCCCGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | CTCCAACGCTACTTGATGAAAATACCTGTAGTCCTTCAACAGGCTGCAGGTGGTTGCCCAACCCAATATTaGAGAACTTTTAGTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LQRYLMKIPVVLQQAAGGCPTQY*RTFSEY Trigger: GTACTCACTAAAAGTTCTCAAATATTGGGTTGGGCA...ACCACCTGCAGCCTGTTGAAGGACTACAGGTATTTTCATCAAGTAGCGTTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | GCTTCCAAAGTTCAGAAGTTTGGCGGGCCTAATCATTTTCCAAAATGGAATCTTTGCAAAGGCAGCGACTaGGAGAAGAAGGGTATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ASKVQKFGGPNHFPKWNLCKGSD*EKKGMY Trigger: ATACATACCCTTCTTCTCCAAGTCGCTGCCTTTGCA...AAGATTCCATTTTGGAAAATGATTAGGCCCGCCAAACTTCTGAACTTTGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | GCTTCCAAAGTTCAGAAGTTTGGCGGGCCTAATCATTTTCCAAAATGGAATCTTTGTCTCCAACGCTACTaGATGAAAATACCTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASKVQKFGGPNHFPKWNLCLQRY*MKIPVV Trigger: GACTACAGGTATTTTCATCAAGTAGCGTTGGAGACA...AAGATTCCATTTTGGAAAATGATTAGGCCCGCCAAACTTCTGAACTTTGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | AGACCGAGTCATCCAGGACTAGAATTAACATATGTATATTCTGTCTGTAAGGCAAACTTGTATGCCCATTaGTGTATGTCTCCAACGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RPSHPGLELTYVYSVCKANLYAH*CMSPTL Trigger: TAGCGTTGGAGACATACACAAATGGGCATACAAGTT...TGCCTTACAGACAGAATATACATATGTTAATTCTAGTCCTGGATGACTCGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS-3UTR CAA 90 bp | ACCTGGTATAAGCCGTGCCCAACCCAATATTTGAGAACTTTTAGTGAGTACTTAGAGTCTGATTTTAAATaGAATCTTCTCAGACCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TWYKPCPTQYLRTFSEYLESDFK*NLLRPS Trigger: ACTCGGTCTGAGAAGATTCAATTTAAAATCAGACTC...TAAGTACTCACTAAAAGTTCTCAAATATTGGGTTGGGCACGGCTTATACCAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS GCA 72 bp | GTCGCTCTGCCTCGGTCAGCTCACTCCACTGATCAGTaGTTGCCACTGGCATCCCATCCGCAGAGTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VALPRSAHSTDQ*LPLASHPQSPG Trigger: ACCTGGACTCTGCGGATGGGATGCCAGTGGCAAGCACTGATCAGTGGAGTGAGCTGACCGAGGCAGAGCGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 72 bp | GCTAGCCAGATAGAGCGGCTACAGAGGTCCCGACGGTaGGGGGTCAGCGGTGAATGCTCTGTGAAAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: ASQIERLQRSRR*GVSGECSVKAI Trigger: GATGGCTTTCACAGAGCATTCACCGCTGACCCCTCACCGTCGGGACCTCTGTAGCCGCTCTATCTGGCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 72 bp | GCGGCTACAGAGGTCCCGACGGTGAGGGGTCAGCGGTaGATGCTCTGTGAAAGCCATCCCTTAACTCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: AATEVPTVRGQR*MLCESHPLTQL Trigger: CAGTTGAGTTAAGGGATGGCTTTCACAGAGCATTCACCGCTGACCCCTCACCGTCGGGACCTCTGTAGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS GCA 72 bp | CTCTGCCTCGGTCAGCTCACTCCACTGATCAGTGCTTaGCACTGGCATCCCATCCGCAGAGTCCAGGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LCLGQLTPLISA*HWHPIRRVQVD Trigger: ATCAACCTGGACTCTGCGGATGGGATGCCAGTGGCAAGCACTGATCAGTGGAGTGAGCTGACCGAGGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 72 bp | GGTCCCGACGGTGAGGGGTCAGCGGTGAATGCTCTGTaGAAGCCATCCCTTAACTCAACTGTCCCAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GPDGEGSAVNAL*KPSLNSTVPGN Trigger: GTTTCCTGGGACAGTTGAGTTAAGGGATGGCTTTCACAGAGCATTCACCGCTGACCCCTCACCGTCGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CCA 72 bp | CTCGGTCAGCTCACTCCACTGATCAGTGCTTGCCACTaGCATCCCATCCGCAGAGTCCAGGTTGATGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGQLTPLISACH*HPIRRVQVDVL Trigger: AAGAACATCAACCTGGACTCTGCGGATGGGATGCCAGTGGCAAGCACTGATCAGTGGAGTGAGCTGACCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 72 bp | TGCTTGCCACTGGCATCCCATCCGCAGAGTCCAGGTTaGTGTTCTTGTTCAGGCCCTGATGCTTCACATAGG | + |
|
Preference number: 6 (lower is better) Translates to: CLPLASHPQSPG*CSCSGPDASHR Trigger: CCTATGTGAAGCATCAGGGCCTGAACAAGAACATCAACCTGGACTCTGCGGATGGGATGCCAGTGGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS GCA 72 bp | GGTACGATAAGCTTGAAGGTTCTCTTGGAGTCGCTCTaGCTCGGTCAGCTCACTCCACTGATCAGTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GTISLKVLLESL*LGQLTPLISAC Trigger: GCAAGCACTGATCAGTGGAGTGAGCTGACCGAGGCAGAGCGACTCCAAGAGAACCTTCAAGCTTATCGTACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CAA 72 bp | GAGCCTGGCCAACAAAACATGGAAGGTACGATAAGCTaGAAGGTTCTCTTGGAGTCGCTCTGCCTCGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EPGQQNMEGTIS*KVLLESLCLGQ Trigger: CTGACCGAGGCAGAGCGACTCCAAGAGAACCTTCAAGCTTATCGTACCTTCCATGTTTTGTTGGCCAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CAA 90 bp | CCTGGCCAACAAAACATGGAAGGTACGATAAGCTTGAAGGTTCTCTaGGAGTCGCTCTGCCTCGGTCAGCTCACTCCACTGATCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PGQQNMEGTISLKVL*ESLCLGQLTPLISA Trigger: AGCACTGATCAGTGGAGTGAGCTGACCGAGGCAGAGCGACTCCAAGAGAACCTTCAAGCTTATCGTACCTTCCATGTTTTGTTGGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS GCA 72 bp | TCATGGATGGACCTTACTGTCCACTGTGAAAGCTCCTaGAGCACCTTTAGGCCCCACAGCTTCTTCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SWMDLTVHCESS*STFRPHSFFSK Trigger: CTTTGAGAAGAAGCTGTGGGGCCTAAAGGTGCTGCAGGAGCTTTCACAGTGGACAGTAAGGTCCATCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CAA 72 bp | CAAAACATGGAAGGTACGATAAGCTTGAAGGTTCTCTaGGAGTCGCTCTGCCTCGGTCAGCTCACTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: QNMEGTISLKVL*ESLCLGQLTPL Trigger: CAGTGGAGTGAGCTGACCGAGGCAGAGCGACTCCAAGAGAACCTTCAAGCTTATCGTACCTTCCATGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 72 bp | TCCCACGTGCTGGGATCCCAGTCTGATGAGAAGAAATaGAACGAAGGTCATGGATGGACCTTACTGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: SHVLGSQSDEKK*NEGHGWTLLST Trigger: AGTGGACAGTAAGGTCCATCCATGACCTTCGTTTCATTTCTTCTCATCAGACTGGGATCCCAGCACGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS TCA 72 bp | AAGGCAGCGACTTGGAGAAGAAGGGTATGTATAGCTTaGTGGAAGTCACCTTCGGTTGGGGTAAAATGCACC | + |
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Preference number: 6 (lower is better) Translates to: KAATWRRRVCIA*WKSPSVGVKCT Trigger: GGTGCATTTTACCCCAACCGAAGGTGACTTCCATCAAGCTATACATACCCTTCTTCTCCAAGTCGCTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CAA 90 bp | AAGAGACCACCATCTCCAACATTAATAGGCATCCCATCAGCCTCATaGCGGGGGATCTTGTATTCCAGGAGTATCATTAACTCCTCTATC | + |
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Preference number: 6 (lower is better) Translates to: KRPPSPTLIGIPSAS*RGILYSRSIINSSI Trigger: GATAGAGGAGTTAATGATACTCCTGGAATACAAGATCCCCCGCAATGAGGCTGATGGGATGCCTATTAATGTTGGAGATGGTGGTCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CAA 72 bp | TTAATAGGCATCCCATCAGCCTCATTGCGGGGGATCTaGTATTCCAGGAGTATCATTAACTCCTCTATCTGG | + |
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Preference number: 6 (lower is better) Translates to: LIGIPSASLRGI*YSRSIINSSIW Trigger: CCAGATAGAGGAGTTAATGATACTCCTGGAATACAAGATCCCCCGCAATGAGGCTGATGGGATGCCTATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CAA 90 bp | TCTCCAACATTAATAGGCATCCCATCAGCCTCATTGCGGGGGATCTaGTATTCCAGGAGTATCATTAACTCCTCTATCTGGTATGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SPTLIGIPSASLRGI*YSRSIINSSIWYAK Trigger: CTTTGCATACCAGATAGAGGAGTTAATGATACTCCTGGAATACAAGATCCCCCGCAATGAGGCTGATGGGATGCCTATTAATGTTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS GCA 72 bp | CATTTTCTTGTTGTTAGCAATATAATGGCTCCCACGTaGTGGGATCCCAGTCTGATGAGAAGAAATGAAACG | + |
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Preference number: 6 (lower is better) Translates to: HFLVVSNIMAPT*WDPSLMRRNET Trigger: CGTTTCATTTCTTCTCATCAGACTGGGATCCCAGCACGTGGGAGCCATTATATTGCTAACAACAAGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CCA 72 bp | ATCTTGTATTCCAGGAGTATCATTAACTCCTCTATCTaGTATGCAAAGGCAGCGACTTGGAGAAGAAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: ILYSRSIINSSI*YAKAATWRRRV Trigger: TACCCTTCTTCTCCAAGTCGCTGCCTTTGCATACCAGATAGAGGAGTTAATGATACTCCTGGAATACAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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| CDS CCA 72 bp | TTTCTTGTTGTTAGCAATATAATGGCTCCCACGTGCTaGGATCCCAGTCTGATGAGAAGAAATGAAACGAAG | + |
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Preference number: 6 (lower is better) Translates to: FLVVSNIMAPTC*DPSLMRRNETK Trigger: CTTCGTTTCATTTCTTCTCATCAGACTGGGATCCCAGCACGTGGGAGCCATTATATTGCTAACAACAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361987.6 |
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