RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNOT6L (Homo sapiens)

Ensembl gene IDs: ENSG00000138767

Ensembl transcript IDs: ENST00000504123.6, ENST00000649644.1

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGTATGTGAAATTTGGGCAGTGGGCTAAAGGGAAACCGTGCACATaGAATTTGGGTTACCATGCCCCAAGTGTGTACCACCCAAAACAT +
Preference number: 1 (lower is better)
Translates to: GYVKFGQWAKGKPCT*NLGYHAPSVYHPKH
Trigger: ATGTTTTGGGTGGTACACACTTGGGGCATGGTAACCCAAATTTCATGTGCACGGTTTCCCTTTAGCCCACTGCCCAAATTTCACATACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 90 bp TGGGAGGGGAGGAAAAGCTGGTCTCAGAACCCATTGTGCCATACCTaGCTTCAACATGTGATATTCAAACGAATGTTCACACGCCTTACA +
Preference number: 1 (lower is better)
Translates to: WEGRKSWSQNPLCHT*LQHVIFKRMFTRLT
Trigger: TGTAAGGCGTGTGAACATTCGTTTGAATATCACATGTTGAAGTCAGGTATGGCACAATGGGTTCTGAGACCAGCTTTTCCTCCCCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 90 bp CTAGTACTAGGCACCAAACTAGAGCCTCCGAAAGATTCTGAAAGCTaGATGGACCATGCTACCACCATGCCAAAAGAGTCATATCACTTG +
Preference number: 1 (lower is better)
Translates to: LVLGTKLEPPKDSES*MDHATTMPKESYHL
Trigger: CAAGTGATATGACTCTTTTGGCATGGTGGTAGCATGGTCCATTCAGCTTTCAGAATCTTTCGGAGGCTCTAGTTTGGTGCCTAGTACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 90 bp GAGGATGCTGCAATATTCCCCATCAAAATGTGTAAAGCTATGAGGTaGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGT +
Preference number: 1 (lower is better)
Translates to: EDAAIFPIKMCKAMR*ILMPERVGDLTCTC
Trigger: ACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCATAGCTTTACACATTTTGATGGGGAATATTGCAGCATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 90 bp GCTATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATaGACTTGTATGACTGTAATAATGGCAAACAGTACAGTTTTCTCT +
Preference number: 1 (lower is better)
Translates to: AMRWILMPERVGDLT*TCMTVIMANSTVFS
Trigger: AGAGAAAACTGTACTGTTTGCCATTATTACAGTCATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 90 bp AAAATAACTAGTACTAGGCACCAAACTAGAGCCTCCGAAAGATTCTaGAAGCTGAATGGACCATGCTACCACCATGCCAAAAGAGTCATA +
Preference number: 1 (lower is better)
Translates to: KITSTRHQTRASERF*KLNGPCYHHAKRVI
Trigger: TATGACTCTTTTGGCATGGTGGTAGCATGGTCCATTCAGCTTTCAGAATCTTTCGGAGGCTCTAGTTTGGTGCCTAGTACTAGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 90 bp AGCCTCCGAAAGATTCTGAAAGCTGAATGGACCATGCTACCACCATaGCAAAAGAGTCATATCACTTGGCATTTGTATATCCTTTCCATA +
Preference number: 1 (lower is better)
Translates to: SLRKILKAEWTMLPP*QKSHITWHLYILSI
Trigger: TATGGAAAGGATATACAAATGCCAAGTGATATGACTCTTTTGGCATGGTGGTAGCATGGTCCATTCAGCTTTCAGAATCTTTCGGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 90 bp AAAAACCCAAGTCTAACCAAATGTATGCCACAAGGAACTGCCAACTaGGTTAAAGCTTGGTATTTTCCTGGTTATCACCCTATTTCCTGG +
Preference number: 1 (lower is better)
Translates to: KNPSLTKCMPQGTAN*VKAWYFPGYHPISW
Trigger: CCAGGAAATAGGGTGATAACCAGGAAAATACCAAGCTTTAACCCAGTTGGCAGTTCCTTGTGGCATACATTTGGTTAGACTTGGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 90 bp AACTCTGTATCTCAGCTTCTCCAAGATGAAAAAGTTGTTTGCATTTaGACAACAACTGTACGAATGCCCATAGTGCACATCTCAGTGCTG +
Preference number: 1 (lower is better)
Translates to: NSVSQLLQDEKVVCI*TTTVRMPIVHISVL
Trigger: CAGCACTGAGATGTGCACTATGGGCATTCGTACAGTTGTTGTCCAAATGCAAACAACTTTTTCATCTTGGAGAAGCTGAGATACAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 90 bp ACATTAAAAATACACAGGATAATGAATGGTTTGAAAGAGCGCATTTaGAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGC +
Preference number: 1 (lower is better)
Translates to: TLKIHRIMNGLKERI*SRENPITHLPATEC
Trigger: GCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATGCGCTCTTTCAAACCATTCATTATCCTGTGTATTTTTAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 90 bp AAAGCTGGTCTCAGAACCCATTGTGCCATACCTGACTTCAACATGTaGTATTCAAACGAATGTTCACACGCCTTACATCAAAGAAATGAA +
Preference number: 1 (lower is better)
Translates to: KAGLRTHCAIPDFNM*YSNECSHALHQRNE
Trigger: TTCATTTCTTTGATGTAAGGCGTGTGAACATTCGTTTGAATATCACATGTTGAAGTCAGGTATGGCACAATGGGTTCTGAGACCAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 90 bp GAAACTGAAATGAGCAAGAAAGGACCACTTCTGAGAGGGTTACCATaGTTCTTACGCTTTAGAGTTAAAAGTGACAGACATACAACTGGA +
Preference number: 1 (lower is better)
Translates to: ETEMSKKGPLLRGLP*FLRFRVKSDRHTTG
Trigger: TCCAGTTGTATGTCTGTCACTTTTAACTCTAAAGCGTAAGAATCATGGTAACCCTCTCAGAAGTGGTCCTTTCTTGCTCATTTCAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 90 bp CTATTGAACTCTGTATCTCAGCTTCTCCAAGATGAAAAAGTTGTTTaGATTTGGACAACAACTGTACGAATGCCCATAGTGCACATCTCA +
Preference number: 1 (lower is better)
Translates to: LLNSVSQLLQDEKVV*IWTTTVRMPIVHIS
Trigger: TGAGATGTGCACTATGGGCATTCGTACAGTTGTTGTCCAAATGCAAACAACTTTTTCATCTTGGAGAAGCTGAGATACAGAGTTCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 90 bp ACAGATTTACTATATCTGAATTCTAAAAAGTTGCCTATAGAATGGTaGTGGGATTCTGTTCTCTGCTTGCTTTTAGGCAGTGCTGTTGCT +
Preference number: 1 (lower is better)
Translates to: TDLLYLNSKKLPIEW*WDSVLCLLLGSAVA
Trigger: AGCAACAGCACTGCCTAAAAGCAAGCAGAGAACAGAATCCCAGCACCATTCTATAGGCAACTTTTTAGAATTCAGATATAGTAAATCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 90 bp AGAGAAAGGACAGTACAGTTTCTAAGTAAATACAGACCCAGATACTaGATCACTTACTGCATCAAGATTGAAACAAGCAGCAGGATACTA +
Preference number: 1 (lower is better)
Translates to: RERTVQFLSKYRPRY*ITYCIKIETSSRIL
Trigger: TAGTATCCTGCTGCTTGTTTCAATCTTGATGCAGTAAGTGATGCAGTATCTGGGTCTGTATTTACTTAGAAACTGTACTGTCCTTTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 90 bp GGAACAGATTTACTATATCTGAATTCTAAAAAGTTGCCTATAGAATaGTGCTGGGATTCTGTTCTCTGCTTGCTTTTAGGCAGTGCTGTT +
Preference number: 1 (lower is better)
Translates to: GTDLLYLNSKKLPIE*CWDSVLCLLLGSAV
Trigger: AACAGCACTGCCTAAAAGCAAGCAGAGAACAGAATCCCAGCACCATTCTATAGGCAACTTTTTAGAATTCAGATATAGTAAATCTGTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACCAAATCCCTCCCCTTaGAAAGTTGGCAGAGCACCG +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRPNPSP*KVGRAP
Trigger: CGGTGCTCTGCCAACTTTTCAAGGGGAGGGATTTGG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGAATTACACACCTTCCTaGAACAGAGTGCCTCGATCA +
Preference number: 2 (lower is better)
Translates to: MRWILMPERVGDLTCTCMNYTPS*NRVPRS
Trigger: TGATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGGCATTTCTGATCATCTaGATTGGCAGCTCAAAACAG +
Preference number: 2 (lower is better)
Translates to: MRWILMPERVGDLTCTCMAFLII*IGSSKQ
Trigger: CTGTTTTGAGCTGCCAATTCAGATGATCAGAAATGC...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAGCAGTAGGTGGATCTaGGCCTTTCCCAGATGTCAG +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRSSRWI*AFPRCQ
Trigger: CTGACATCTGGGAAAGGCTCAGATCCACCTACTGCT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCTTCCTGCAACAGAGTaGCTCGATCATACACAAAAT +
Preference number: 2 (lower is better)
Translates to: MRWILMPERVGDLTCTCMLPATE*LDHTQN
Trigger: ATTTTGTGTATGATCGAGGCACTCTGTTGCAGGAAG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACTCCCCTTGAAAAGTTaGCAGAGCACCGCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRLPLKS*QSTAQE
Trigger: TTCCTGAGCGGTGCTCTGCCAACTTTTCAAGGGGAG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAGGGTGAAGGGTATGTaGAATTTGGGCAGTGGGCTA +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRRVKGM*NLGSGL
Trigger: TAGCCCACTGCCCAAATTTCACATACCCTTCACCCT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATGAGGGGAGGAAAAGCTaGTCTCAGAACCCATTGTGC +
Preference number: 2 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNEGRKS*SQNPLC
Trigger: GCACAATGGGTTCTGAGACCAGCTTTTCCTCCCCTC...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATCTCCAAACATGGTATaGCTCAAAGGGAAAGGCGTA +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRSPNMV*LKGKGV
Trigger: TACGCCTTTCCCTTTGAGTCATACCATGTTTGGAGA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATTGCCTATAGAATGGTaGTGGGATTCTGTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRLPIEW*WDSVLC
Trigger: GCAGAGAACAGAATCCCAGCACCATTCTATAGGCAA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATGTGAAATTTGGGCAGTaGGCTAAAGGGAAACCGTGC +
Preference number: 2 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNVKFGQ*AKGKPC
Trigger: GCACGGTTTCCCTTTAGCCCACTGCCCAAATTTCAC...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACCTATAGAATGGTGCTaGGATTCTGTTCTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRPIEWC*DSVLCL
Trigger: CAAGCAGAGAACAGAATCCCAGCACCATTCTATAGG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATATCACCCTATTTCCTaGTGTAGGACCTGGGGTTTA +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRYHPIS*CRTWGL
Trigger: TAAACCCCAGGTCCTACACCAGGAAATAGGGTGATA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATTTAGGCAGTGCTGTTaGTTAAAAGTTGACACCAGG +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRFRQCC*LKVDTR
Trigger: CCTGGTGTCAACTTTTAAGCAACAGCACTGCCTAAA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAACCATGCTACCACCATaGCAAAAGAGTCATATCACT +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRTMLPP*QKSHIT
Trigger: AGTGATATGACTCTTTTGGCATGGTGGTAGCATGGT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAATACGAAACTGAAATaGGCAAGAAAGGACCACTTC +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRNTKLK*ARKDHF
Trigger: GAAGTGGTCCTTTCTTGCTCATTTCAGTTTCGTATT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATTACTGCATCAAGATTaGAACAAGCAGCAGGATACT +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRLLHQD*NKQQDT
Trigger: AGTATCCTGCTGCTTGTTTCAATCTTGATGCAGTAA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATTGGGATTCTGTTCTCTaGTTGCTTTTAGGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNWDSVL*LLLGSA
Trigger: AGCACTGCCTAAAAGCAAGCAGAGAACAGAATCCCA...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAGCTTGGTATTTTCCTaGTTATCACCCTATTTCCTG +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRSLVFS*LSPYFL
Trigger: CAGGAAATAGGGTGATAACCAGGAAAATACCAAGCT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATGCATTTCTGATCATCTaGATTGGCAGCTCAAAACAG +
Preference number: 2 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNAFLII*IGSSKQ
Trigger: CTGTTTTGAGCTGCCAATTCAGATGATCAGAAATGC...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAGGGAAAGGCGTAAATaGATCTACTACACATTAGAA +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRRERRK*IYYTLE
Trigger: TTCTAATGTGTAGTAGATTCATTTACGCCTTTCCCT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATTGTAAAGCTATGAGGTaGATACTGATGCCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNCKAMR*ILMPER
Trigger: TCTCTCAGGCATCAGTATCCACCTCATAGCTTTACA...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATAAGTTGCCTATAGAATaGTGCTGGGATTCTGTTCTC +
Preference number: 2 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNKLPIE*CWDSVL
Trigger: GAGAACAGAATCCCAGCACCATTCTATAGGCAACTT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAATGAAAGATGCTCTTaGCATCCTGTTCTTAAACAG +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRNERCS*HPVLKQ
Trigger: CTGTTTAAGAACAGGATGCCAAGAGCATCTTTCATT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAACTGGGTTAAAGCTTaGTATTTTCCTGGTTATCAC +
Preference number: 2 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRNWVKA*YFPGYH
Trigger: GTGATAACCAGGAAAATACCAAGCTTTAACCCAGTT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATAAGTTCCAAATGGCATaGGGTTTAACAAGACAATGC +
Preference number: 2 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNKFQMA*GLTRQC
Trigger: GCATTGTCTTGTTAAACCGCATGCCATTTGGAACTT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATCTTGCTTTTAGGCAGTaGTGTTGCTTAAAAGTTGAC +
Preference number: 2 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNLAFRQ*CCLKVD
Trigger: GTCAACTTTTAAGCAACAGCACTGCCTAAAAGCAAG...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 72 bp GGCAGTGGGCTAAAGGGAAACCGTGCACATGAAATTTaGGTTACCATGCCCCAAGTGTGTACCACCCAAAAC +
Preference number: 3 (lower is better)
Translates to: GSGLKGNRAHEI*VTMPQVCTTQN
Trigger: GTTTTGGGTGGTACACACTTGGGGCATGGTAACCCAAATTTCATGTGCACGGTTTCCCTTTAGCCCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 72 bp AAATTTGGGCAGTGGGCTAAAGGGAAACCGTGCACATaGAATTTGGGTTACCATGCCCCAAGTGTGTACCAC +
Preference number: 3 (lower is better)
Translates to: KFGQWAKGKPCT*NLGYHAPSVYH
Trigger: GTGGTACACACTTGGGGCATGGTAACCCAAATTTCATGTGCACGGTTTCCCTTTAGCCCACTGCCCAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 72 bp GGCACCAAACTAGAGCCTCCGAAAGATTCTGAAAGCTaGATGGACCATGCTACCACCATGCCAAAAGAGTCA +
Preference number: 3 (lower is better)
Translates to: GTKLEPPKDSES*MDHATTMPKES
Trigger: TGACTCTTTTGGCATGGTGGTAGCATGGTCCATTCAGCTTTCAGAATCTTTCGGAGGCTCTAGTTTGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 72 bp GCAATATTCCCCATCAAAATGTGTAAAGCTATGAGGTaGATACTGATGCCTGAGAGAGTGGGTGACTTGACA +
Preference number: 3 (lower is better)
Translates to: AIFPIKMCKAMR*ILMPERVGDLT
Trigger: TGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCATAGCTTTACACATTTTGATGGGGAATATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 72 bp AGTCTAACCAAATGTATGCCACAAGGAACTGCCAACTaGGTTAAAGCTTGGTATTTTCCTGGTTATCACCCT +
Preference number: 3 (lower is better)
Translates to: SLTKCMPQGTAN*VKAWYFPGYHP
Trigger: AGGGTGATAACCAGGAAAATACCAAGCTTTAACCCAGTTGGCAGTTCCTTGTGGCATACATTTGGTTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 72 bp ATACACAGGATAATGAATGGTTTGAAAGAGCGCATTTaGAGCAGAGAGAACCCAATTACACACCTTCCTGCA +
Preference number: 3 (lower is better)
Translates to: IHRIMNGLKERI*SRENPITHLPA
Trigger: TGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATGCGCTCTTTCAAACCATTCATTATCCTGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 72 bp CTCAGAACCCATTGTGCCATACCTGACTTCAACATGTaGTATTCAAACGAATGTTCACACGCCTTACATCAA +
Preference number: 3 (lower is better)
Translates to: LRTHCAIPDFNM*YSNECSHALHQ
Trigger: TTGATGTAAGGCGTGTGAACATTCGTTTGAATATCACATGTTGAAGTCAGGTATGGCACAATGGGTTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 72 bp AGGAAAAGCTGGTCTCAGAACCCATTGTGCCATACCTaGCTTCAACATGTGATATTCAAACGAATGTTCACA +
Preference number: 3 (lower is better)
Translates to: RKSWSQNPLCHT*LQHVIFKRMFT
Trigger: TGTGAACATTCGTTTGAATATCACATGTTGAAGTCAGGTATGGCACAATGGGTTCTGAGACCAGCTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 72 bp TCTCAGCTTCTCCAAGATGAAAAAGTTGTTTGCATTTaGACAACAACTGTACGAATGCCCATAGTGCACATC +
Preference number: 3 (lower is better)
Translates to: SQLLQDEKVVCI*TTTVRMPIVHI
Trigger: GATGTGCACTATGGGCATTCGTACAGTTGTTGTCCAAATGCAAACAACTTTTTCATCTTGGAGAAGCTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 72 bp AAGACAATGCTGAGGAAAGCAGCATTTCTGATCATCTaGATTGGCAGCTCAAAACAGATACCACTCCTTTTA +
Preference number: 3 (lower is better)
Translates to: KTMLRKAAFLII*IGSSKQIPLLL
Trigger: TAAAAGGAGTGGTATCTGTTTTGAGCTGCCAATTCAGATGATCAGAAATGCTGCTTTCCTCAGCATTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR TCA 72 bp ATGAGCAAGAAAGGACCACTTCTGAGAGGGTTACCATaGTTCTTACGCTTTAGAGTTAAAAGTGACAGACAT +
Preference number: 3 (lower is better)
Translates to: MSKKGPLLRGLP*FLRFRVKSDRH
Trigger: ATGTCTGTCACTTTTAACTCTAAAGCGTAAGAATCATGGTAACCCTCTCAGAAGTGGTCCTTTCTTGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 72 bp AGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTaGCTCGATCATACACAAAATAAACTTAAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: RENPITHLPATE*LDHTQNKLKLF
Trigger: AAACAGCTTAAGTTTATTTTGTGTATGATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 72 bp AAGATTCTGAAAGCTGAATGGACCATGCTACCACCATaGCAAAAGAGTCATATCACTTGGCATTTGTATATC +
Preference number: 3 (lower is better)
Translates to: KILKAEWTMLPP*QKSHITWHLYI
Trigger: GATATACAAATGCCAAGTGATATGACTCTTTTGGCATGGTGGTAGCATGGTCCATTCAGCTTTCAGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 72 bp TCTGTATCTCAGCTTCTCCAAGATGAAAAAGTTGTTTaGATTTGGACAACAACTGTACGAATGCCCATAGTG +
Preference number: 3 (lower is better)
Translates to: SVSQLLQDEKVV*IWTTTVRMPIV
Trigger: CACTATGGGCATTCGTACAGTTGTTGTCCAAATGCAAACAACTTTTTCATCTTGGAGAAGCTGAGATACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 72 bp AATGCTGAGGAAAGCAGCATTTCTGATCATCTGAATTaGCAGCTCAAAACAGATACCACTCCTTTTACAAAG +
Preference number: 3 (lower is better)
Translates to: NAEESSISDHLN*QLKTDTTPFTK
Trigger: CTTTGTAAAAGGAGTGGTATCTGTTTTGAGCTGCCAATTCAGATGATCAGAAATGCTGCTTTCCTCAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CCA 72 bp GTGTCTATTGTGAAAAACATCTCAGCTGAGCAGTTTTaGTCAAGATTCAGACCTCATCAACTGTTTAACTGT +
Preference number: 3 (lower is better)
Translates to: VSIVKNISAEQF*SRFRPHQLFNC
Trigger: ACAGTTAAACAGTTGATGAGGTCTGAATCTTGACCAAAACTGCTCAGCTGAGATGTTTTTCACAATAGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR GCA 72 bp TGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTaGCACATCCTCAATTCTAATATAATCTACCATAGA +
Preference number: 3 (lower is better)
Translates to: WNTIFAHVPVLM*HILNSNIIYHR
Trigger: TCTATGGTAGATTATATTAGAATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCCAAATCCCTCCCCTTaGAAAGTTGGCAGAGCACCG +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMPNPSP*KVGRAP
Trigger: CGGTGCTCTGCCAACTTTTCAAGGGGAGGGATTTGG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGAGCAGTAGGTGGATCTaGGCCTTTCCCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMSSRWI*AFPRCQ
Trigger: CTGACATCTGGGAAAGGCTCAGATCCACCTACTGCT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCTCATTCTCTTCCTCTaGCCCAGAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMLILFL*PRSNSS
Trigger: GCTGCTGTTGCTTCTGGGCCAGAGGAAGAGAATGAG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACTCCCCTTGAAAAGTTaGCAGAGCACCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRLPLKS*QSTAQE
Trigger: TTCCTGAGCGGTGCTCTGCCAACTTTTCAAGGGGAG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCTCCCCTTGAAAAGTTaGCAGAGCACCGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASILPLKS*QSTAQE
Trigger: TTCCTGAGCGGTGCTCTGCCAACTTTTCAAGGGGAG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCGGGAAACCGTGCACATaGAATTTGGGTTACCATGCC +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIGKPCT*NLGYHA
Trigger: GGCATGGTAACCCAAATTTCATGTGCACGGTTTCCC...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCAGGGTGAAGGGTATGTaGAATTTGGGCAGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIRVKGM*NLGSGL
Trigger: TAGCCCACTGCCCAAATTTCACATACCCTTCACCCT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGAAATTTGGGTTACCATaGCCCAAGTGTGTACCACCC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMKFGLP*PKCVPP
Trigger: GGGTGGTACACACTTGGGGCATGGTAACCCAAATTT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCCAACCGTGTCCTTTTaGACGCACACTTTGTACAGT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMPTVSF*THTLYS
Trigger: ACTGTACAAAGTGTGCGTGCAAAAGGACACGGTTGG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACCAACCGTGTCCTTTTaGACGCACACTTTGTACAGT +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRPTVSF*THTLYS
Trigger: ACTGTACAAAGTGTGCGTGCAAAAGGACACGGTTGG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTCTCCAAACATGGTATaGCTCAAAGGGAAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMSPNMV*LKGKGV
Trigger: TACGCCTTTCCCTTTGAGTCATACCATGTTTGGAGA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCAAAGATTCTGAAAGCTaGATGGACCATGCTACCACC +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIKDSES*MDHATT
Trigger: GGTGGTAGCATGGTCCATTCAGCTTTCAGAATCTTT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAAGAAAGGACCACTTCTaGGAGGGTTACCATGATTCT +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRRKDHF*EGYHDS
Trigger: AGAATCATGGTAACCCTCTCAGAAGTGGTCCTTTCT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCTGGGATTCTGTTCTCTaGTTGCTTTTAGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIWDSVL*LLLGSA
Trigger: AGCACTGCCTAAAAGCAAGCAGAGAACAGAATCCCA...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTTGCCTATAGAATGGTaGTGGGATTCTGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMLPIEW*WDSVLC
Trigger: GCAGAGAACAGAATCCCAGCACCATTCTATAGGCAA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTATCACCCTATTTCCTaGTGTAGGACCTGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMYHPIS*CRTWGL
Trigger: TAAACCCCAGGTCCTACACCAGGAAATAGGGTGATA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAATTCTGAAAGCTGAATaGACCATGCTACCACCATGC +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRILKAE*TMLPPC
Trigger: GCATGGTGGTAGCATGGTCCATTCAGCTTTCAGAAT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGATTCTGAAAGCTGAATaGACCATGCTACCACCATGC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMILKAE*TMLPPC
Trigger: GCATGGTGGTAGCATGGTCCATTCAGCTTTCAGAAT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCACTTTCTCCAGGGATaGCAGAGAGTGTTAAATGGT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIHFLQG*QRVLNG
Trigger: ACCATTTAACACTCTCTGCCATCCCTGGAGAAAGTG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCTCTGAGTTTATTGGATaGCAGATCCAGGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASISEFIG*QIQVNQ
Trigger: CTGGTTTACCTGGATCTGTCATCCAATAAACTCAGA...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTCTGTTTCCACTTCCTaGAGACTAATGATATCTGCG +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMSVSTS*RLMISA
Trigger: CGCAGATATCATTAGTCTTCAGGAAGTGGAAACAGA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAGCATTTCTGATCATCTaGATTGGCAGCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRAFLII*IGSSKQ
Trigger: CTGTTTTGAGCTGCCAATTCAGATGATCAGAAATGC...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACCATTGTGCCATACCTaGCTTCAACATGTGATATTC +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRPLCHT*LQHVIF
Trigger: GAATATCACATGTTGAAGTCAGGTATGGCACAATGG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCCATTGTGCCATACCTaGCTTCAACATGTGATATTC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMPLCHT*LQHVIF
Trigger: GAATATCACATGTTGAAGTCAGGTATGGCACAATGG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCTGAGAGGGTTACCATaGTTCTTACGCTTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASILRGLP*FLRFRV
Trigger: AACTCTAAAGCGTAAGAATCATGGTAACCCTCTCAG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCTGAGAGGGTTACCATaGTTCTTACGCTTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMLRGLP*FLRFRV
Trigger: AACTCTAAAGCGTAAGAATCATGGTAACCCTCTCAG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACCTATACATCATGTGTaGGCAGTAACCAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRPIHHV*AVTNLQ
Trigger: TTGGAGATTGGTTACTGCTCACACATGATGTATAGG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCCTATACATCATGTGTaGGCAGTAACCAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIPIHHV*AVTNLQ
Trigger: TTGGAGATTGGTTACTGCTCACACATGATGTATAGG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCTTCCTGCAACAGAGTaGCTCGATCATACACAAAAT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASILPATE*LDHTQN
Trigger: ATTTTGTGTATGATCGAGGCACTCTGTTGCAGGAAG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACTTCCTGCAACAGAGTaGCTCGATCATACACAAAAT +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRLPATE*LDHTQN
Trigger: ATTTTGTGTATGATCGAGGCACTCTGTTGCAGGAAG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCTTTTGGCTTCTCACTaGCAAAGTTCCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASILLASH*QSSKWH
Trigger: ATGCCATTTGGAACTTTGGCAGTGAGAAGCCAAAAG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACTTTTGGCTTCTCACTaGCAAAGTTCCAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRLLASH*QSSKWH
Trigger: ATGCCATTTGGAACTTTGGCAGTGAGAAGCCAAAAG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATTTAGGCAGTGCTGTTaGTTAAAAGTTGACACCAGG +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRFRQCC*LKVDTR
Trigger: CCTGGTGTCAACTTTTAAGCAACAGCACTGCCTAAA...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCTTTAGGCAGTGCTGTTaGTTAAAAGTTGACACCAGG +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIFRQCC*LKVDTR
Trigger: CCTGGTGTCAACTTTTAAGCAACAGCACTGCCTAAA...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAACCATGCTACCACCATaGCAAAAGAGTCATATCACT +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRTMLPP*QKSHIT
Trigger: AGTGATATGACTCTTTTGGCATGGTGGTAGCATGGT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATACAGACCCAGATACTaGATCACTTACTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRYRPRY*ITYCIK
Trigger: CTTGATGCAGTAAGTGATGCAGTATCTGGGTCTGTA...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCTACAGACCCAGATACTaGATCACTTACTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIYRPRY*ITYCIK
Trigger: CTTGATGCAGTAAGTGATGCAGTATCTGGGTCTGTA...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGGGGGAAGTACACAGGTaGAAGGAAACAAGCATATAT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMGEVHR*KETSIY
Trigger: ATATATGCTTGTTTCCTTGCACCTGTGTACTTCCCC...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAAAAATGGCCATTTATTaGCTACAGGGGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRKMAIY*LQGKER
Trigger: CCTTTCCTTCCCCTGTAGGCAATAAATGGCCATTTT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACTCATTCTCTTCCTCTaGCCCAGAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRLILFL*PRSNSS
Trigger: GCTGCTGTTGCTTCTGGGCCAGAGGAAGAGAATGAG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTGTAAAGCTATGAGGTaGATACTGATGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMCKAMR*ILMPER
Trigger: TCTCTCAGGCATCAGTATCCACCTCATAGCTTTACA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAAAGTTGCCTATAGAATaGTGCTGGGATTCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRKLPIE*CWDSVL
Trigger: GAGAACAGAATCCCAGCACCATTCTATAGGCAACTT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAGAGGGGAGGAAAAGCTaGTCTCAGAACCCATTGTGC +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSREGRKS*SQNPLC
Trigger: GCACAATGGGTTCTGAGACCAGCTTTTCCTCCCCTC...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTCCTGGTGTAGGACCTaGGGTTTAATAGAGACATTT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMSWCRT*GLIETF
Trigger: AAATGTCTCTATTAAACCCCAGGTCCTACACCAGGA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTCAGCTGAGCAGTTTTaGTCAAGATTCAGACCTCAT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMSAEQF*SRFRPH
Trigger: ATGAGGTCTGAATCTTGACCAAAACTGCTCAGCTGA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCAGTCAATCACGCCTTTaGAATCAAAGGTGTAATTGG +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASISQSRL*NQRCNW
Trigger: CCAATTACACCTTTGATTTCAAAGGCGTGATTGACT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCAATACGAAACTGAAATaGGCAAGAAAGGACCACTTC +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASINTKLK*ARKDHF
Trigger: GAAGTGGTCCTTTCTTGCTCATTTCAGTTTCGTATT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTTACTGCATCAAGATTaGAACAAGCAGCAGGATACT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMLLHQD*NKQQDT
Trigger: AGTATCCTGCTGCTTGTTTCAATCTTGATGCAGTAA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATTACTGCATCAAGATTaGAACAAGCAGCAGGATACT +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRLLHQD*NKQQDT
Trigger: AGTATCCTGCTGCTTGTTTCAATCTTGATGCAGTAA...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATCCAAATCCCTCCCCTTaGAAAGTTGGCAGAGCACCG +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNPNPSP*KVGRAP
Trigger: CGGTGCTCTGCCAACTTTTCAAGGGGAGGGATTTGG...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGGAAAAACATCTCAGCTaGGCAGTTTTGGTCAAGATT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMEKHLS*AVLVKI
Trigger: AATCTTGACCAAAACTGCTCAGCTGAGATGTTTTTC...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGAAGTTCCAAATGGCATaGGGTTTAACAAGACAATGC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMKFQMA*GLTRQC
Trigger: GCATTGTCTTGTTAAACCGCATGCCATTTGGAACTT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCTTGCTTTTAGGCAGTaGTGTTGCTTAAAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMLAFRQ*CCLKVD
Trigger: GTCAACTTTTAAGCAACAGCACTGCCTAAAAGCAAG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTGCACATCTCAGTGCTaGTGGTGTTTAAGAAATTTG +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMCTSQC*WCLRNL
Trigger: CAAATTTCTTAAACACCAGCAGCACTGAGATGTGCA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCTTGGCAATATCAGGTaGAATGCGACTAAGGTAATT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMLGNIR*NATKVI
Trigger: AATTACCTTAGTCGCATTCCACCTGATATTGCCAAG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACTTGGCAATATCAGGTaGAATGCGACTAAGGTAATT +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRLGNIR*NATKVI
Trigger: AATTACCTTAGTCGCATTCCACCTGATATTGCCAAG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAGTGAAATTTGGGCAGTaGGCTAAAGGGAAACCGTGC +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRVKFGQ*AKGKPC
Trigger: GCACGGTTTCCCTTTAGCCCACTGCCCAAATTTCAC...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGACAGTTCTCCAAACATaGTATGACTCAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMTVLQT*YDSKGK
Trigger: CTTTCCCTTTGAGTCATACCATGTTTGGAGAACTGT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCAGCTTGGTATTTTCCTaGTTATCACCCTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASISLVFS*LSPYFL
Trigger: CAGGAAATAGGGTGATAACCAGGAAAATACCAAGCT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGAGCTTGGTATTTTCCTaGTTATCACCCTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMSLVFS*LSPYFL
Trigger: CAGGAAATAGGGTGATAACCAGGAAAATACCAAGCT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCAAGGAACTGCCAACTaGGTTAAAGCTTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIQGTAN*VKAWYF
Trigger: AAAATACCAAGCTTTAACCCAGTTGGCAGTTCCTTG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCCTGACTTCAACATGTaGTATTCAAACGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMPDFNM*YSNECS
Trigger: TGAACATTCGTTTGAATATCACATGTTGAAGTCAGG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAAAGTTAATACGAAACTaGAATGAGCAAGAAAGGACC +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRKLIRN*NEQERT
Trigger: GGTCCTTTCTTGCTCATTTCAGTTTCGTATTAACTT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCAACAAAGCCAAAGATaGAACATTCAACCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIQQSQR*NIQPSQ
Trigger: TTGAGAAGGTTGAATGTTTCATCTTTGGCTTTGTTG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACAACAAAGCCAAAGATaGAACATTCAACCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRQQSQR*NIQPSQ
Trigger: TTGAGAAGGTTGAATGTTTCATCTTTGGCTTTGTTG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCACGAAGAACTCAACATaGTTATTTTCCTTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASITKNST*LFSFGS
Trigger: GGAACCAAAGGAAAATAAGCATGTTGAGTTCTTCGT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTACTGCATCACTTACTaGATCAAGATTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMYCITY*IKIETS
Trigger: GCTTGTTTCAATCTTGATGCAGTAAGTGATGCAGTA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATACTGCATCACTTACTaGATCAAGATTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRYCITY*IKIETS
Trigger: GCTTGTTTCAATCTTGATGCAGTAAGTGATGCAGTA...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAGGTTTTACAGTCATGTaGTTTGCTTTGCAACCATTA +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRGFTVM*FALQPL
Trigger: TAATGGTTGCAAAGCAAAGCACATGACTGTAAAACC...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGACACAGGATAATGAATaGTTTGAAAGAGCGCATTTG +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMTQDNE*FERAHL
Trigger: CAAATGCGCTCTTTCAAACCATTCATTATCCTGTGT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCAATGAAAGATGCTCTTaGCATCCTGTTCTTAAACAG +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASINERCS*HPVLKQ
Trigger: CTGTTTAAGAACAGGATGCCAAGAGCATCTTTCATT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAAACTGGGTTAAAGCTTaGTATTTTCCTGGTTATCAC +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRNWVKA*YFPGYH
Trigger: GTGATAACCAGGAAAATACCAAGCTTTAACCCAGTT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGACTAAAACACCTTGCTTaGTTTTACAGTCATGTGCTT +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRLKHLA*FYSHVL
Trigger: AAGCACATGACTGTAAAACCAAGCAAGGTGTTTTAG...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCTAAAACACCTTGCTTaGTTTTACAGTCATGTGCTT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASILKHLA*FYSHVL
Trigger: AAGCACATGACTGTAAAACCAAGCAAGGTGTTTTAG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGGCAGAGAGTGTTAAATaGTTAAAACACCTACAGAAC +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMAESVK*LKHLQN
Trigger: GTTCTGTAGGTGTTTTAACCATTTAACACTCTCTGC...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAGCAGAGAGTGTTAAATaGTTAAAACACCTACAGAAC +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRAESVK*LKHLQN
Trigger: GTTCTGTAGGTGTTTTAACCATTTAACACTCTCTGC...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACTGCTCTGGATGAACTaGGAGATTGTCAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRLLWMN*EIVKHE
Trigger: TTCATGCTTGACAATCTCGCAGTTCATCCAGAGCAG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAAATGATGTGGTTATATaGCTCTGGTTCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRNDVVI*LWFFKE
Trigger: TTCTTTGAAGAACCAGAGGCATATAACCACATCATT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGGACATACTTCTAAAATaGAGTTCAATGCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMDILLK*SSMLLS
Trigger: ACTGAGTAGCATTGAACTGCATTTTAGAAGTATGTC...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTACAGTCATGTGCTTTaGTTTGCAACCATTAGAATT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMYSHVL*FATIRI
Trigger: AATTCTAATGGTTGCAAAGCAAAGCACATGACTGTA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCGTTACTAAAACACCTTaGTTGGTTTTACAGTCATGT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASIVTKTP*LVLQSC
Trigger: ACATGACTGTAAAACCAAGCAAGGTGTTTTAGTAAC...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGAATGACATAATGATGTaGTTATATGCCTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: MRWILMPERVGDLTCTCMNDIMM*LYASGS
Trigger: AGAACCAGAGGCATATAACCACATCATTATGTCATT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCAATGACATAATGATGTaGTTATATGCCTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FEAERTQLHTFLQQSASINDIMM*LYASGS
Trigger: AGAACCAGAGGCATATAACCACATCATTATGTCATT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAAAAGTTGTTTGCATTTaGACAACAACTGTACGAATG +
Preference number: 4 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRKVVCI*TTTVRM
Trigger: CATTCGTACAGTTGTTGTCCAAATGCAAACAACTTT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
3UTR CAA 72 bp AATACACAGGATAATGAATGGTTTGAAAGAGCGCATTaGAAGCAGAGAGAACCCAATTACACACCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NTQDNEWFERAH*KQREPNYTPSC
Trigger: GCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATGCGCTCTTTCAAACCATTCATTATCCTGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATCTGAGTTTATTGGATaGCAGATCCAGGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRSEFIG*QIQVNQ
Trigger: CTGGTTTACCTGGATCTGTCATCCAATAAACTCAGA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAGCATTTCTGATCATCTaGATTGGCAGCTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRAFLII*IGSSKQ
Trigger: CTGTTTTGAGCTGCCAATTCAGATGATCAGAAATGC...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAGGGGAAGTACACAGGTaGAAGGAAACAAGCATATAT +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRGEVHR*KETSIY
Trigger: ATATATGCTTGTTTCCTTGCACCTGTGTACTTCCCC...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAAAATGGCCATTTATTaGCTACAGGGGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRKMAIY*LQGKER
Trigger: CCTTTCCTTCCCCTGTAGGCAATAAATGGCCATTTT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACTGCTGGTAAACTTCTaGGTTTATTGGATGACAGAT +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRLLVNF*VYWMTD
Trigger: ATCTGTCATCCAATAAACTCAGAAGTTTACCAGCAG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAGTCAATCACGCCTTTaGAATCAAAGGTGTAATTGG +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRSQSRL*NQRCNW
Trigger: CCAATTACACCTTTGATTTCAAAGGCGTGATTGACT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAGAAAAACATCTCAGCTaGGCAGTTTTGGTCAAGATT +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSREKHLS*AVLVKI
Trigger: AATCTTGACCAAAACTGCTCAGCTGAGATGTTTTTC...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATCTGCTCTGGATGAACTaGGAGATTGTCAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNLLWMN*EIVKHE
Trigger: TTCATGCTTGACAATCTCGCAGTTCATCCAGAGCAG...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATAATTACACACCTTCCTaGAACAGAGTGCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNNYTPS*NRVPRS
Trigger: TGATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAACAAGAAATATGCATaGTCTTCCTTACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRNKKYA*SSLPPS
Trigger: GGAAGGTGGTAAGGAAGAGCATGCATATTTCTTGTT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATCTGATCATCTGAATTaGCAGCTCAAAACAGATACC +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRSDHLN*QLKTDT
Trigger: GGTATCTGTTTTGAGCTGCCAATTCAGATGATCAGA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATCCTATAGAATGGTGCTaGGATTCTGTTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNPIEWC*DSVLCL
Trigger: CAAGCAGAGAACAGAATCCCAGCACCATTCTATAGG...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATTATCACCCTATTTCCTaGTGTAGGACCTGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNYHPIS*CRTWGL
Trigger: TAAACCCCAGGTCCTACACCAGGAAATAGGGTGATA...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACAAGGAACTGCCAACTaGGTTAAAGCTTGGTATTTT +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRQGTAN*VKAWYF
Trigger: AAAATACCAAGCTTTAACCCAGTTGGCAGTTCCTTG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATCACTTTCTCCAGGGATaGCAGAGAGTGTTAAATGGT +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNHFLQG*QRVLNG
Trigger: ACCATTTAACACTCTCTGCCATCCCTGGAGAAAGTG...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAAGTTAATACGAAACTaGAATGAGCAAGAAAGGACC +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRKLIRN*NEQERT
Trigger: GGTCCTTTCTTGCTCATTTCAGTTTCGTATTAACTT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACCTGTGATAAAGGATTaGCTTTCAAACCTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRPVIKD*LSNLEF
Trigger: AAACTCTAGGTTTGAAAGGCAATCCTTTATCACAGG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAACGAAGAACTCAACATaGTTATTTTCCTTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRTKNST*LFSFGS
Trigger: GGAACCAAAGGAAAATAAGCATGTTGAGTTCTTCGT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATACCATGCTACCACCATaGCAAAAGAGTCATATCACT +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNTMLPP*QKSHIT
Trigger: AGTGATATGACTCTTTTGGCATGGTGGTAGCATGGT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATCCAGATTATGAAGCTTaGCAATATCAGGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNPDYEA*QYQVEC
Trigger: GCATTCCACCTGATATTGCCAAGCTTCATAATCTGG...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATTCCTGGTGTAGGACCTaGGGTTTAATAGAGACATTT +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNSWCRT*GLIETF
Trigger: AAATGTCTCTATTAAACCCCAGGTCCTACACCAGGA...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATTCAGCTGAGCAGTTTTaGTCAAGATTCAGACCTCAT +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNSAEQF*SRFRPH
Trigger: ATGAGGTCTGAATCTTGACCAAAACTGCTCAGCTGA...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR TCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATCTGCTGGTAAACTTCTaGGTTTATTGGATGACAGAT +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNLLVNF*VYWMTD
Trigger: ATCTGTCATCCAATAAACTCAGAAGTTTACCAGCAG...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAATGATGTGGTTATATaGCTCTGGTTCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRNDVVI*LWFFKE
Trigger: TTCTTTGAAGAACCAGAGGCATATAACCACATCATT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATTGCACATCTCAGTGCTaGTGGTGTTTAAGAAATTTG +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNCTSQC*WCLRNL
Trigger: CAAATTTCTTAAACACCAGCAGCACTGAGATGTGCA...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATACAGTTCTCCAAACATaGTATGACTCAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNTVLQT*YDSKGK
Trigger: CTTTCCCTTTGAGTCATACCATGTTTGGAGAACTGT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAAGAGTCATATCACTTaGCATTTGTATATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRKSHIT*HLYILS
Trigger: GGAAAGGATATACAAATGCCAAGTGATATGACTCTT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAAAAGTTGTTTGCATTTaGACAACAACTGTACGAATG +
Preference number: 4 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRKVVCI*TTTVRM
Trigger: CATTCGTACAGTTGTTGTCCAAATGCAAACAACTTT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATGGTTTTACAGTCATGTaGTTTGCTTTGCAACCATTA +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNGFTVM*FALQPL
Trigger: TAATGGTTGCAAAGCAAAGCACATGACTGTAAAACC...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATACACAGGATAATGAATaGTTTGAAAGAGCGCATTTG +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNTQDNE*FERAHL
Trigger: CAAATGCGCTCTTTCAAACCATTCATTATCCTGTGT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATAACTGGGTTAAAGCTTaGTATTTTCCTGGTTATCAC +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNNWVKA*YFPGYH
Trigger: GTGATAACCAGGAAAATACCAAGCTTTAACCCAGTT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATGACATACTTCTAAAATaGAGTTCAATGCTACTCAGT +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNDILLK*SSMLLS
Trigger: ACTGAGTAGCATTGAACTGCATTTTAGAAGTATGTC...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATTACAGTCATGTGCTTTaGTTTGCAACCATTAGAATT +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNYSHVL*FATIRI
Trigger: AATTCTAATGGTTGCAAAGCAAAGCACATGACTGTA...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR GCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATGTTACTAAAACACCTTaGTTGGTTTTACAGTCATGT +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNVTKTP*LVLQSC
Trigger: ACATGACTGTAAAACCAAGCAAGGTGTTTTAGTAAC...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CCA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATAAGAGTCATATCACTTaGCATTTGTATATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNKSHIT*HLYILS
Trigger: GGAAAGGATATACAAATGCCAAGTGATATGACTCTT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGCCTCCCCTTGAAAAGTaGGCAGAGCACCGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: MRWILMPERVGDLTCTCMPPLEK*AEHRSG
Trigger: TCCTGAGCGGTGCTCTGCCAACTTTTCAAGGGGAGG...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAACCAACCGTGTCCTTTaGCACGCACACTTTGTACAG +
Preference number: 5 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRTNRVL*HAHFVQ
Trigger: CTGTACAAAGTGTGCGTGCAAAAGGACACGGTTGGT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAGAGAGAGTGGGTGACTaGACATGCACTTGTATGACT +
Preference number: 5 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRERVGD*TCTCMT
Trigger: AGTCATACAAGTGCATGTCAAGTCACCCACTCTCTC...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCGAGAGAGTGGGTGACTaGACATGCACTTGTATGACT +
Preference number: 5 (lower is better)
Translates to: FEAERTQLHTFLQQSASIERVGD*TCTCMT
Trigger: AGTCATACAAGTGCATGTCAAGTCACCCACTCTCTC...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACCTCCCCTTGAAAAGTaGGCAGAGCACCGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRPPLEK*AEHRSG
Trigger: TCCTGAGCGGTGCTCTGCCAACTTTTCAAGGGGAGG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCAAAATGGCCATTTATaGCCTACAGGGGAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: FEAERTQLHTFLQQSASIQNGHL*PTGEGK
Trigger: CTTTCCTTCCCCTGTAGGCAATAAATGGCCATTTTG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATTTGAAAGAGCGCATTaGAAGCAGAGAGAACCCAAT +
Preference number: 5 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRFERAH*KQREPN
Trigger: ATTGGGTTCTCTCTGCTTCAAATGCGCTCTTTCAAA...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTTTGAAAGAGCGCATTaGAAGCAGAGAGAACCCAAT +
Preference number: 5 (lower is better)
Translates to: MRWILMPERVGDLTCTCMFERAH*KQREPN
Trigger: ATTGGGTTCTCTCTGCTTCAAATGCGCTCTTTCAAA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCTTACTGCATCAAGATaGAAACAAGCAGCAGGATAC +
Preference number: 5 (lower is better)
Translates to: FEAERTQLHTFLQQSASILTASR*KQAAGY
Trigger: GTATCCTGCTGCTTGTTTCAATCTTGATGCAGTAAG...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGAAGCAGCTGGTGATTTaGTCAGAGAGAATGTGTTCA +
Preference number: 5 (lower is better)
Translates to: MRWILMPERVGDLTCTCMKQLVI*SERMCS
Trigger: TGAACACATTCTCTCTGACAAAATCACCAGCTGCTT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGAAAGCAGCTGGTGATTTaGTCAGAGAGAATGTGTTCA +
Preference number: 5 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRKQLVI*SERMCS
Trigger: TGAACACATTCTCTCTGACAAAATCACCAGCTGCTT...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCCTGTGATAAAGGATaGCCTTTCAAACCTAGAGTT +
Preference number: 5 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRSCDKG*PFKPRV
Trigger: AACTCTAGGTTTGAAAGGCAATCCTTTATCACAGGA...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCTCAATGTCATGTCTGTaGAACGAAGAACTCAACATG +
Preference number: 5 (lower is better)
Translates to: FEAERTQLHTFLQQSASISMSCL*NEELNM
Trigger: CATGTTGAGTTCTTCGTTCAACAGACATGACATTGA...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGAAGCAAAGCCATTGTTaGACATCAATGCTGAACCAA +
Preference number: 5 (lower is better)
Translates to: MRWILMPERVGDLTCTCMKQSHC*TSMLNQ
Trigger: TTGGTTCAGCATTGATGTCAAACAATGGCTTTGCTT...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGGAGTGGAAAAGTAGATaGTCCCATGGACAATTAGTT +
Preference number: 5 (lower is better)
Translates to: MRWILMPERVGDLTCTCMEWKSR*SHGQLV
Trigger: AACTAATTGTCCATGGGACAATCTACTTTTCCACTC...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCACTAAAACACCTTGCTaGGTTTTACAGTCATGTGCT +
Preference number: 5 (lower is better)
Translates to: FEAERTQLHTFLQQSASITKTPC*VLQSCA
Trigger: AGCACATGACTGTAAAACCAAGCAAGGTGTTTTAGT...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp TTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATCTTTTGCACGCACACTTaGTACAGTGTCTATTGTGAA +
Preference number: 5 (lower is better)
Translates to: FEAERTQLHTFLQQSASIFCTHT*YSVYCE
Trigger: TTCACAATAGACACTGTACAAAGTGTGCGTGCAAAA...GATCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAACCAACCGTGTCCTTTaGCACGCACACTTTGTACAG +
Preference number: 5 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRTNRVL*HAHFVQ
Trigger: CTGTACAAAGTGTGCGTGCAAAAGGACACGGTTGGT...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp ATGAGGTGGATACTGATGCCTGAGAGAGTGGGTGACTTGACATGCACTTGTATGTGGTGTTTAAGAAATTaGTCACTCATAACCCTGAAC +
Preference number: 5 (lower is better)
Translates to: MRWILMPERVGDLTCTCMWCLRN*SLITLN
Trigger: GTTCAGGGTTATGAGTGACAAATTTCTTAAACACCA...CATACAAGTGCATGTCAAGTCACCCACTCTCTCAGGCATCAGTATCCACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CATTTGAAGCAGAGAGAACCCAATTACACACCTTCCTGCAACAGAGTGCCTCGATTCCAAGTAGTTCTATaGAACTCTGTATCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: HLKQREPNYTPSCNRVPRFQVVL*NSVSQL
Trigger: AAGCTGAGATACAGAGTTCAATAGAACTACTTGGAA...TCGAGGCACTCTGTTGCAGGAAGGTGTGTAATTGGGTTCTCTCTGCTTCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGACTTACTGCATCAAGATaGAAACAAGCAGCAGGATAC +
Preference number: 5 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRLTASR*KQAAGY
Trigger: GTATCCTGCTGCTTGTTTCAATCTTGATGCAGTAAG...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGAGAGTGGAAAAGTAGATaGTCCCATGGACAATTAGTT +
Preference number: 5 (lower is better)
Translates to: QCCWCLRNLSLITLNNSREWKSR*SHGQLV
Trigger: AACTAATTGTCCATGGGACAATCTACTTTTCCACTC...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATTTTGCACGCACACTTaGTACAGTGTCTATTGTGAA +
Preference number: 5 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRFCTHT*YSVYCE
Trigger: TTCACAATAGACACTGTACAAAGTGTGCGTGCAAAA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATCAAAATGGCCATTTATaGCCTACAGGGGAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNQNGHL*PTGEGK
Trigger: CTTTCCTTCCCCTGTAGGCAATAAATGGCCATTTTG...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATGGTGTTTAAGAAATTaGTCACTCATAACCCTGAAC +
Preference number: 5 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRWCLRN*SLITLN
Trigger: GTTCAGGGTTATGAGTGACAAATTTCTTAAACACCA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp CAGTGCTGCTGGTGTTTAAGAAATTTGTCACTCATAACCCTGAACAATTCCAGATTCCAAGTAGTTCTATaGAACTCTGTATCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: QCCWCLRNLSLITLNNSRFQVVL*NSVSQL
Trigger: AAGCTGAGATACAGAGTTCAATAGAACTACTTGGAA...TCTGGAATTGTTCAGGGTTATGAGTGACAAATTTCTTAAACACCAGCAGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATAAGCAAAGCCATTGTTaGACATCAATGCTGAACCAA +
Preference number: 5 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNKQSHC*TSMLNQ
Trigger: TTGGTTCAGCATTGATGTCAAACAATGGCTTTGCTT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1
CDS-3UTR CAA 90 bp AAATGGAACACTATATTTGCCCATGTTCCAGTTTTAATGTGCCACATCCTCAATACTAAAACACCTTGCTaGGTTTTACAGTCATGTGCT +
Preference number: 5 (lower is better)
Translates to: KWNTIFAHVPVLMCHILNTKTPC*VLQSCA
Trigger: AGCACATGACTGTAAAACCAAGCAAGGTGTTTTAGT...ATTGAGGATGTGGCACATTAAAACTGGAACATGGGCAAATATAGTGTTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504123.6
ENST00000649644.1