RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNOT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000080802

Ensembl transcript IDs: ENST00000315544.6, ENST00000361528.8, ENST00000414802.5, ENST00000423368.6, ENST00000428680.6, ENST00000451834.5, ENST00000465721.1, ENST00000473470.1, ENST00000491203.5, ENST00000498534.5, ENST00000541284.5

Found 663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAATACTGCACAAACGTCCAGAAACTACAGGGTTAAGTAAAAGCTaGAGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATG +
Preference number: 1 (lower is better)
Translates to: SILHKRPETTGLSKS*RQGGQRFAPDGDQM
Trigger: CATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCTGCAGCTTTTACTTAACCCTGTAGTTTCTGGACGTTTGTGCAGTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR TCA 90 bp CAATGTTTACTCCGTATTCAAGTTTCAGATAAGTCAACTATAAACTaGAGTTCTGTTTTTGAGGCATTTCCTGGTATACTAGGCAGTGCA +
Preference number: 1 (lower is better)
Translates to: QCLLRIQVSDKSTIN*SSVFEAFPGILGSA
Trigger: TGCACTGCCTAGTATACCAGGAAATGCCTCAAAAACAGAACTTCAGTTTATAGTTGACTTATCTGAAACTTGAATACGGAGTAAACATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACTGTGGGTGGTGGGCTaGGAGGGAGAAAACAGAGTG +
Preference number: 2 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQLWVVG*EGENRV
Trigger: CACTCTGTTTTCTCCCTCTCAGCCCACCACCCACAG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGCAATCTCACGTAAATaGACCTGGTTTTCAAACTTC +
Preference number: 2 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQAISRK*TWFSNF
Trigger: GAAGTTTGAAAACCAGGTTCATTTACGTGAGATTGC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGACAGAGGAGAAGGACTaGAGAAATGACTTACATTTC +
Preference number: 2 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQTEEKD*RNDLHF
Trigger: GAAATGTAAGTCATTTCTTCAGTCCTTCTCCTCTGT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTACAGAGGAGAAGGACTaGAGAAATGACTTACATTTC +
Preference number: 2 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSATEEKD*RNDLHF
Trigger: GAAATGTAAGTCATTTCTTCAGTCCTTCTCCTCTGT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTACACAATCAAGTCCTTaGCATCAACTTGCCAAAAGA +
Preference number: 2 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSATQSSP*HQLAKR
Trigger: TCTTTTGGCAAGTTGATGGCAAGGACTTGATTGTGT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR GCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAATGCAAAAATCCAGTTaGCCATGCAAGCACCCCAGA +
Preference number: 2 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIMQKSS*PCKHPR
Trigger: TCTGGGGTGCTTGCATGGGCAACTGGATTTTTGCAT...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCAGAACATAAGAGATaGGAAGGGAGCTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLSEHKR*EGSCGW
Trigger: CCACCCACAGCTCCCTTCTCATCTCTTATGTTCTGA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGATGGTAATGACCCTGTaGTCGCATTGCATCTGGGGT +
Preference number: 2 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLMVMTL*SHCIWG
Trigger: ACCCCAGATGCAATGCGATCACAGGGTCATTACCAT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR GCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAATGCAAAAATCCAGTTaGCCATGCAAGCACCCCAGA +
Preference number: 2 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPMQKSS*PCKHPR
Trigger: TCTGGGGTGCTTGCATGGGCAACTGGATTTTTGCAT...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAAGGGAGAAAACAGAGTaGGACAAATCCTGCATTTTC +
Preference number: 2 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQREKTE*DKSCIF
Trigger: GAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGCAATCTCACGTAAATaGACCTGGTTTTCAAACTTC +
Preference number: 2 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQAISRK*TWFSNF
Trigger: GAAGTTTGAAAACCAGGTTCATTTACGTGAGATTGC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAACAGAGGAGAAGGACTaGAGAAATGACTTACATTTC +
Preference number: 2 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQTEEKD*RNDLHF
Trigger: GAAATGTAAGTCATTTCTTCAGTCCTTCTCCTCTGT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAATGGTAATGACCCTGTaGTCGCATTGCATCTGGGGT +
Preference number: 2 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPMVMTL*SHCIWG
Trigger: ACCCCAGATGCAATGCGATCACAGGGTCATTACCAT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR TCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCCAACAATATCCTTCTaGGCATTAAATGACACCACC +
Preference number: 2 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSPTISF*ALNDTT
Trigger: GGTGGTGTCATTTAATGCTCAGAAGGATATTGTTGG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGAGGAACGTTTATATTaGCTCTTCTGGGTGTATACA +
Preference number: 2 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPEERLY*LFWVYT
Trigger: TGTATACACCCAGAAGAGCCAATATAAACGTTCCTC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCACTAGCTAATCTCACCTaGGATCTTAGTACTACAAGT +
Preference number: 2 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPLANLT*DLSTTS
Trigger: ACTTGTAGTACTAAGATCCCAGGTGAGATTAGCTAG...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR CCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATCTAGCTAATCTCACCTaGGATCTTAGTACTACAAGT +
Preference number: 2 (lower is better)
Translates to: RFAILFRALANLGKLPDDLANLT*DLSTTS
Trigger: ACTTGTAGTACTAAGATCCCAGGTGAGATTAGCTAG...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
3UTR-3UTR TCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACATACTTCAACAACTATaGGGTAACACGCTAGCTGTA +
Preference number: 2 (lower is better)
Translates to: SSTGDISEVLASYSKNENILQQL*GNTLAV
Trigger: TACAGCTAGCGTGTTACCTCATAGTTGTTGAAGTAT...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
3UTR-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCGAGGAACGTTTATATTaGCTCTTCTGGGTGTATACA +
Preference number: 2 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSEERLY*LFWVYT
Trigger: TGTATACACCCAGAAGAGCCAATATAAACGTTCCTC...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR TCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATACCAACAATATCCTTCTaGGCATTAAATGACACCACC +
Preference number: 2 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIPTISF*ALNDTT
Trigger: GGTGGTGTCATTTAATGCTCAGAAGGATATTGTTGG...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
3UTR-3UTR GCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATATCATAAAGGAATCATaGAAAAATCCAGTTGCCCAT +
Preference number: 2 (lower is better)
Translates to: RFAILFRALANLGKLPDDIIKES*KNPVAH
Trigger: ATGGGCAACTGGATTTTTGCATGATTCCTTTATGAT...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
3UTR-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGCCTTAGTCTCATTCTaGTCAGGTACTTATAATATT +
Preference number: 2 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPALVSF*SGTYNI
Trigger: AATATTATAAGTACCTGACCAGAATGAGACTAAGGC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR CCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACCATGTAGGCAGAATATaGTCATGTTTTCTGAATCAG +
Preference number: 2 (lower is better)
Translates to: SSTGDISEVLASYSKNENHVGRI*SCFLNQ
Trigger: CTGATTCAGAAAACATGACCATATTCTGCCTACATG...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
3UTR-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAGGGAGAAAACAGAGTaGGACAAATCCTGCATTTTC +
Preference number: 2 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPREKTE*DKSCIF
Trigger: GAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAAGCTGAATACAAGATaGATGCTAGGACCACTGCTT +
Preference number: 2 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPKLNTR*MLGPLL
Trigger: AAGCAGTGGTCCTAGCATCCATCTTGTATTCAGCTT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR GCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCATCATAAAGGAATCATaGAAAAATCCAGTTGCCCAT +
Preference number: 2 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSIIKES*KNPVAH
Trigger: ATGGGCAACTGGATTTTTGCATGATTCCTTTATGAT...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCATACTTCAACAACTATaGGGTAACACGCTAGCTGTA +
Preference number: 2 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFILQQL*GNTLAV
Trigger: TACAGCTAGCGTGTTACCTCATAGTTGTTGAAGTAT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR GCA 72 bp CTGCAAGCTCCACCTCCTGGGTTCGCGCCATTCTCCTaGCTCAGCCTCCCGAGTAGCTGGGGCTACAGGTGC +
Preference number: 3 (lower is better)
Translates to: LQAPPPGFAPFS*LSLPSSWGYRC
Trigger: GCACCTGTAGCCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGCGAACCCAGGAGGTGGAGCTTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
3UTR-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGACCCTGTGATCGCATaGCATCTGGGGTTAGGGAGA +
Preference number: 3 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQDPVIA*HLGLGR
Trigger: TCTCCCTAACCCCAGATGCAATGCGATCACAGGGTC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR GCA 72 bp GCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATaGTCGTCTCAGGAGCTTATCTCTTCCCACCACCCA +
Preference number: 3 (lower is better)
Translates to: APGHPPLLSYTT*SSQELISSHHP
Trigger: TGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
3UTR CCA 72 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATaGCCCCAGAGCAGTGCTATCTCAGAGTGCCCTCGT +
Preference number: 3 (lower is better)
Translates to: KEVRDLLPMVIR*PQSSAISECPR
Trigger: ACGAGGGCACTCTGAGATAGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGACACAATCAAGTCCTaGCCATCAACTTGCCAAAAG +
Preference number: 3 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQDTIKS*PSTCQK
Trigger: CTTTTGGCAAGTTGATGGCAAGGACTTGATTGTGTC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGACACAATCAAGTCCTaGCCATCAACTTGCCAAAAG +
Preference number: 3 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSADTIKS*PSTCQK
Trigger: CTTTTGGCAAGTTGATGGCAAGGACTTGATTGTGTC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGACCCTGTGATCGCATaGCATCTGGGGTTAGGGAGA +
Preference number: 3 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQDPVIA*HLGLGR
Trigger: TCTCCCTAACCCCAGATGCAATGCGATCACAGGGTC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCTACTACAGATGAATTaGTCTTTCCATCAACTTCCA +
Preference number: 3 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSALLQMN*SFHQLP
Trigger: TGGAAGTTGATGGAAAGACAAATTCATCTGTAGTAG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCATGCAAAAATCCAGTaGCCCATGCAAGCACCCCAG +
Preference number: 3 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSHAKIQ*PMQAPQ
Trigger: CTGGGGTGCTTGCATGGGCAACTGGATTTTTGCATG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR CCA 72 bp TCCCTTTCTTCCCAGATGCTTCATGTAGGCAGAATATaGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCT +
Preference number: 3 (lower is better)
Translates to: SLSSQMLHVGRI*SCFLNQLLSTA
Trigger: AGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTGGGAAGAAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
3UTR-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACTACTACAGATGAATTaGTCTTTCCATCAACTTCCA +
Preference number: 3 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQLLQMN*SFHQLP
Trigger: TGGAAGTTGATGGAAAGACAAATTCATCTGTAGTAG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
3UTR-3UTR CAA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATAATGGCACTAACCACTaGCTATGGCTTTGTAAGAAG +
Preference number: 3 (lower is better)
Translates to: RFAILFRALANLGKLPDDNGTNH*LWLCKK
Trigger: CTTCTTACAAAGCCATAGCAAGTGGTTAGTGCCATT...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
3UTR TCA 72 bp GGTGAAGCTTACAAGGAAGGTGTAGGAATTACAAAGTaGGGCAAAAGATCATGTTTAGCCATTCTATGCAAA +
Preference number: 3 (lower is better)
Translates to: GEAYKEGVGITK*GKRSCLAILCK
Trigger: TTTGCATAGAATGGCTAAACATGATCTTTTGCCTCACTTTGTAATTCCTACACCTTCCTTGTAAGCTTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428680.6
3UTR-3UTR CAA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTGACATAAGTGAAGTCTaGGCCTCTTACAGTAAAAAT +
Preference number: 3 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSDISEV*ASYSKN
Trigger: ATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTC...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGCGGGATCTGTGTGCTaGAGGGGGCGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAAGSVC*RGRCGG
Trigger: CCCACCACAGCGCCCCCTTCAGCACACAGATCCCGC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAAGGGGGCGCTGTGGTaGGTCTGTGATGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQKGALW*VCDGAA
Trigger: CGCTGCTCCATCACAGACCCACCACAGCGCCCCCTT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAAGGGGGCGCTGTGGTaGGTCTGTGATGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAKGALW*VCDGAA
Trigger: CGCTGCTCCATCACAGACCCACCACAGCGCCCCCTT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCTTCAGAACCGGGCCTaGTTGCTTCAGCGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQLQNRA*LLQRVR
Trigger: TCGGACTCGCTGAAGCAATCAGGCCCGGTTCTGAAG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCTGAAGGGGGCGCTGTaGTGGGTCTGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSALKGAL*WVCDGA
Trigger: TGCTCCATCACAGACCCACCACAGCGCCCCCTTCAG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCACACTGTATGGCTCTaGGAGCGTCTTCTGACCGGA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQHTVWL*ERLLTG
Trigger: TCCGGTCAGAAGACGCTCTCAGAGCCATACAGTGTG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGGCCGTCCATCTCTGTaGGGGCCTGAAGGGATTTTA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQGRPSL*GPEGIL
Trigger: TAAAATCCCTTCAGGCCCTCACAGAGATGGACGGCC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGATTTGCTCCCGATGGTaGTCAGATGGCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQICSRW*SDGPRA
Trigger: TGCTCTGGGGCCATCTGATCACCATCGGGAGCAAAT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAGAACCGGGCCTGATTaGTTCAGCGAGTCCGACCTT +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQRTGPD*FSESDL
Trigger: AAGGTCGGACTCGCTGAAGCAATCAGGCCCGGTTCT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTCTCCAAGGGCTCCATaGAAAGAGGGCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQSPRAP*KEGTPQ
Trigger: CTGTGGAGTGCCCTCTTTGCATGGAGCCCTTGGAGA...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGCTCTGTGGTTCTGGTaGTGTAGGCCAGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQALWFW*CRPVTG
Trigger: TCCAGTGACTGGCCTACAGCACCAGAACCACAGAGC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTATGGCCCCAGAGCAGTaGTATCTCAGAGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAMAPEQ*YLRVPS
Trigger: CGAGGGCACTCTGAGATAGCACTGCTCTGGGGCCAT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTACTCTCAGCTTTCGGTaGGTTCCACAGCCAGACGGG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSATLSFR*VPQPDG
Trigger: CCCGTCTGGCTGTGGAACCCACCGAAAGCTGAGAGT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGTCACTGGATGTCTGTaGGGAGCTGGGGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAVTGCL*GAGERR
Trigger: CCTCCTTTCCCCAGCTCCCCACAGACATCCAGTGAC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGATGTGAAGAGGCTCTGTaGTTCTGGTGCTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: HRAWPPTSLKLYHMLVSGCEEAL*FWCCRP
Trigger: TGGCCTACAGCACCAGAACCACAGAGCCTCTTCACA...TCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGTGGGGAGTGGAAGCTaGAAGGGTTTGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQVGSGS*KGLKEE
Trigger: CTCCTCCTTCAAACCCTTCCAGCTTCCACTCCCCAC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGACGTTGGTGCACTGTaGTTGGCGTTGGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSADVGAL*LALEGE
Trigger: TTCCCCCTCCAACGCCAACCACAGTGCACCAACGTC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCGGTGGTGGCAGTGTTaGACGTTGGTGCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSARWWQC*TLVHCG
Trigger: ACCACAGTGCACCAACGTCCAACACTGCCACCACCG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTCAGGCTGTCGGTGGTaGCAGTGTTGGACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSASGCRW*QCWTLV
Trigger: CACCAACGTCCAACACTGCCACCACCGACAGCCTGA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAACTCAGGCTGTCGGTaGTGGCAGTGTTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQNSGCR*WQCWTL
Trigger: CAACGTCCAACACTGCCACCACCGACAGCCTGAGTT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTACCTGTGATGATGGCTaGGTCTGTCCAGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSATCDDG*VCPAAR
Trigger: CCTGGCAGCTGGACAGACCCAGCCATCATCACAGGT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCACACTGTATGGCTCTaGGAGCGTCTTCTGACCGGA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAHTVWL*ERLLTG
Trigger: TCCGGTCAGAAGACGCTCTCAGAGCCATACAGTGTG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGCATTTCCTCTTTTGTaGAGCTGGCCGCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAAFPLL*SWPPHP
Trigger: GGGATGAGGCGGCCAGCTTCACAAAAGAGGAAATGC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGCGGGATCTGTGTGCTaGAGGGGGCGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQAGSVC*RGRCGG
Trigger: CCCACCACAGCGCCCCCTTCAGCACACAGATCCCGC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAGAACCGGGCCTGATTaGTTCAGCGAGTCCGACCTT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSARTGPD*FSESDL
Trigger: AAGGTCGGACTCGCTGAAGCAATCAGGCCCGGTTCT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGCTCTGTGGTTCTGGTaGTGTAGGCCAGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAALWFW*CRPVTG
Trigger: TCCAGTGACTGGCCTACAGCACCAGAACCACAGAGC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCCAAGGATAGCGGGCTaGCTGGCCTGGAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAPRIAG*LAWKTE
Trigger: TTCAGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAPRPVL*CGGRFK
Trigger: CTTGAATCTCCCGCCACAGCACAACACAGGTCTGGG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAGTGTTGGACGTTGGTaGACTGTGGTTGGCGTTGGA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQSVGRW*TVVGVG
Trigger: TCCAACGCCAACCACAGTGCACCAACGTCCAACACT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAAGGTTACATAAGCACTaGCACTTGGACCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: HRAWPPTSLKLYHMLVSGRLHKH*HLDPVS
Trigger: GCTCACAGGGTCCAAGTGCCAGTGCTTATGTAACCT...TCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp GGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTCAGGCTGGAGCACAGTaGCACCATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GHPPLLSYTTCSSQELISQAGAQ*HHLGSL
Trigger: CAGTGAGCCGAGATGGTGCCACTGTGCTCCAGCCTG...AGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCCGATGGTGATCAGATaGCCCCAGAGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAPMVIR*PQSSAI
Trigger: GATAGCACTGCTCTGGGGCCATCTGATCACCATCGG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAACTCAGGCTGTCGGTaGTGGCAGTGTTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSANSGCR*WQCWTL
Trigger: CAACGTCCAACACTGCCACCACCGACAGCCTGAGTT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGGGTCTGCTAGGCGCTaGGATAAACCTACAACAAAG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQGSARR*DKPTTK
Trigger: CTTTGTTGTAGGTTTATCTCAGCGCCTAGCAGACCC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCACTGTGATTGGATaGACTGATGGGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQCTVIG*TDGDDW
Trigger: CCAGTCATCCCCATCAGTTCATCCAATCACAGTGCA...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTGGGGACCGTGCACTGTaGTTGGATGAACTGATGGGG +
Preference number: 4 (lower is better)
Translates to: GHPPLLSYTTCSSQELISGDRAL*LDELMG
Trigger: CCCCATCAGTTCATCCAATCACAGTGCACGGTCCCC...AGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAGGGAAGGTTGGTCTTaGACGGACAGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQREGWS*TDSSFS
Trigger: TGAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGGTCTGAAGGCTGTCTaGAAGCCTGGGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGGLKAV*KPGGGE
Trigger: CTCCCCACCCCCAGGCTTTCAGACAGCCTTCAGACC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGGGGTATCGTACCTCTaGAGTGGTGTCACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQGVSYL*SGVTLF
Trigger: GAACAAAGTGACACCACTGCAGAGGTACGATACCCC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR GCA 90 bp CCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCGCTCTGTGGTTCTGGTaGTGTAGGCCAGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: PGHPPLLSYTTCSSQELIALWFW*CRPVTG
Trigger: TCCAGTGACTGGCCTACAGCACCAGAACCACAGAGC...GATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAGTGTTGGACGTTGGTaGACTGTGGTTGGCGTTGGA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSASVGRW*TVVGVG
Trigger: TCCAACGCCAACCACAGTGCACCAACGTCCAACACT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGACTCTTCCTGGGAGAGTaGTTTATAAACTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HRAWPPTSLKLYHMLVSGLFLGE*FINCWV
Trigger: GACCCAGCAGTTTATAAACCACTCTCCCAGGAAGAG...TCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAGGTTACATAAGCACTaGCACTTGGACCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQRLHKH*HLDPVS
Trigger: GCTCACAGGGTCCAAGTGCCAGTGCTTATGTAACCT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGACTGAAGGTTTGTCAATaGGGGTATCGTACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRAWPPTSLKLYHMLVSGLKVCQ*GYRTSA
Trigger: TGCAGAGGTACGATACCCCCATTGACAAACCTTCAG...TCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTGTGAAGAGGCTCTGTaGTTCTGGTGCTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSACEEAL*FWCCRP
Trigger: TGGCCTACAGCACCAGAACCACAGAGCCTCTTCACA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCAGGAATCCAGAGCCTaGACCTTTGGCGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAQESRA*TFGGCS
Trigger: ACTACAACCGCCAAAGGTCCAGGCTCTGGATTCCTG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCACTGTGGTTGGCGTTaGAGGGGGAAGAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAHCGWR*RGKKNW
Trigger: CCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp ACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGTCATCCCCCAATTCATaGAGATACATGCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TAPGHPPLLSYTTCSSQESSPNS*RYMQSG
Trigger: ACCTGACTGCATGTATCTTCATGAATTGGGGGATGA...CTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp CTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCGCATTTCCTCTTTTGTaGAGCTGGCCGCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: LYHMLVSGAYLFPPPNDIAFPLL*SWPPHP
Trigger: GGGATGAGGCGGCCAGCTTCACAAAAGAGGAAATGC...GATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTACTGGGATTGTTTCTaGTGTGAAGAGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQYWDCF*CEEALW
Trigger: CCACAGAGCCTCTTCACATCAGAAACAATCCCAGTA...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGACTAAGGCTTTTCGAGTaGCATCGAAGGGATCAAAAC +
Preference number: 4 (lower is better)
Translates to: HRAWPPTSLKLYHMLVSGLRLFE*HRRDQN
Trigger: GTTTTGATCCCTTCGATGTCACTCGAAAAGCCTTAG...TCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCCTCTGGGGCAAGACTaGAAAGGTACTATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQPLGQD*KGTIER
Trigger: TCTCTCAATAGTACCTTTTCAGTCTTGCCCCAGAGG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGTGGTTCAAGTGCATaGTGCTATTGCGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQCGSSA*CYCVER
Trigger: CCTTTCCACGCAATAGCATCATGCACTTGAACCACA...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTATCTCTGTGAGGGCCTaGAGGGATTTTAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAISVRA*RDFSQC
Trigger: ACACTGGCTAAAATCCCTTCAGGCCCTCACAGAGAT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGGTCTGAAGGCTGTCTaGAAGCCTGGGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQGLKAV*KPGGGE
Trigger: CTCCCCACCCCCAGGCTTTCAGACAGCCTTCAGACC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTATGGTAATGACCCTGTaGTCGCATTGCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAMVMTL*SHCIWG
Trigger: ACCCCAGATGCAATGCGATCACAGGGTCATTACCAT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAACGACCCGCCTGCCTTaGCTCGCTTTTCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQTTRLP*LAFPSA
Trigger: GGCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp ACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGAAGCCAAAAGCTGCTTaGCAGTCTGTAGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: TAPGHPPLLSYTTCSSQEKPKAA*QSVEDD
Trigger: ATCATCCTCTACAGACTGGCAAGCAGCTTTTGGCTT...CTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGATTGGCATTTGTAGCTaGAGCAGGATGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQIGICS*SRMQES
Trigger: GGATTCCTGCATCCTGCTGCAGCTACAAATGCCAAT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGCTGTGTGGTTCAAGTaGATGATGCTATTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQAVWFK*MMLLRG
Trigger: TCCACGCAATAGCATCATGCACTTGAACCACACAGC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGGGTTAAGTAAAAGCTaGAGGCAAGGAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQGLSKS*RQGGQR
Trigger: TCTCTGACCTCCTTGCCTGCAGCTTTTACTTAACCC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACGTCACTGGATGTCTGTaGGGAGCTGGGGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPLLSYTTCSSQELISSHVTGCL*GAGERR
Trigger: CCTCCTTTCCCCAGCTCCCCACAGACATCCAGTGAC...GTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGTGGGGTTTGCTGTGTaGTTCAAGTGCATGATGCTA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQVGFAV*FKCMML
Trigger: TAGCATCATGCACTTGAACCACACAGCAAACCCCAC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCTGAAGGGGGCGCTGTaGTGGGTCTGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGLKGAL*WVCDGA
Trigger: TGCTCCATCACAGACCCACCACAGCGCCCCCTTCAG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGGCTGTCTGAAAGCCTaGGGGTGGGGAGTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGGCLKA*GWGVEA
Trigger: AGCTTCCACTCCCCACCCCCAGGCTTTCAGACAGCC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACACTGTATGGCTCTaGGAGCGTCTTCTGACCGGA +
Preference number: 4 (lower is better)
Translates to: PPLLSYTTCSSQELISSHHTVWL*ERLLTG
Trigger: TCCGGTCAGAAGACGCTCTCAGAGCCATACAGTGTG...GTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTCATCCCCCAATTCATaGAGATACATGCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQSSPNS*RYMQSG
Trigger: ACCTGACTGCATGTATCTTCATGAATTGGGGGATGA...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCACCGTTCCCTATACTaGGAGAATCTGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQHRSLY*ENLKVC
Trigger: ACAAACCTTCAGATTCTCTCAGTATAGGGAACGGTG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGGGGACCGTGCACTGTaGTTGGATGAACTGATGGGG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGGDRAL*LDELMG
Trigger: CCCCATCAGTTCATCCAATCACAGTGCACGGTCCCC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTACTGGGATTGTTTCTaGTGTGAAGAGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAYWDCF*CEEALW
Trigger: CCACAGAGCCTCTTCACATCAGAAACAATCCCAGTA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTGTGGTTCAAGTGCATaGTGCTATTGCGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSACGSSA*CYCVER
Trigger: CCTTTCCACGCAATAGCATCATGCACTTGAACCACA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCTGTGGGTGGTGGGCTaGGAGGGAGAAAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGLWVVG*EGENRV
Trigger: CACTCTGTTTTCTCCCTCTCAGCCCACCACCCACAG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAGCCGACTCCACGGGCTaGCGCGTCCTCACAAGAAAC +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIADSTG*RVLTRN
Trigger: GTTTCTTGTGAGGACGCGGCAGCCCGTGGAGTCGGC...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCGGGGTATCGTACCTCTaGAGTGGTGTCACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: PGHPPLLSYTTCSSQELIGVSYL*SGVTLF
Trigger: GAACAAAGTGACACCACTGCAGAGGTACGATACCCC...GATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp AGCCACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCATTAAGCTATACCACATaGTCGTCTCAGGAGCTTATC +
Preference number: 4 (lower is better)
Translates to: SHRAWPPTSLKLYHMLVSLSYTT*SSQELI
Trigger: GATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAA...TGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAGTGCTATCTCAGAGTaGCCTCGTCAGGTGAATTTA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQSAISE*PRQVNL
Trigger: TAAATTCACCTGACGAGGGCACTCTGAGATAGCACT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTATGGCCCCAGAGCAGTaGTATCTCAGAGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGMAPEQ*YLRVPS
Trigger: CGAGGGCACTCTGAGATAGCACTGCTCTGGGGCCAT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAACTGCTGGGTCTTCTaGATATGGCTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQNCWVF*IWLSTC
Trigger: GCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCTCTTCCTGGGAGAGTaGTTTATAAACTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSALFLGE*FINCWV
Trigger: GACCCAGCAGTTTATAAACCACTCTCCCAGGAAGAG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGTCACTGGATGTCTGTaGGGAGCTGGGGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGVTGCL*GAGERR
Trigger: CCTCCTTTCCCCAGCTCCCCACAGACATCCAGTGAC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGGCTGTCTGAAAGCCTaGGGGTGGGGAGTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQGCLKA*GWGVEA
Trigger: AGCTTCCACTCCCCACCCCCAGGCTTTCAGACAGCC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACTTCAGAACCGGGCCTaGTTGCTTCAGCGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQLQNRA*LLQRVR
Trigger: TCGGACTCGCTGAAGCAATCAGGCCCGGTTCTGAAG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATGGGTCTGCTAGGCGCTaGGATAAACCTACAACAAAG +
Preference number: 4 (lower is better)
Translates to: AIPHARLRSLSLPTTQRHGSARR*DKPTTK
Trigger: CTTTGTTGTAGGTTTATCTCAGCGCCTAGCAGACCC...ATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTCATCCCCCAATTCATaGAGATACATGCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSASSPNS*RYMQSG
Trigger: ACCTGACTGCATGTATCTTCATGAATTGGGGGATGA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCACCGTTCCCTATACTaGGAGAATCTGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAHRSLY*ENLKVC
Trigger: ACAAACCTTCAGATTCTCTCAGTATAGGGAACGGTG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATTGCACTGTGATTGGATaGACTGATGGGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: AIPHARLRSLSLPTTQRHCTVIG*TDGDDW
Trigger: CCAGTCATCCCCATCAGTTCATCCAATCACAGTGCA...ATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGGGGACCGTGCACTGTaGTTGGATGAACTGATGGGG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQGDRAL*LDELMG
Trigger: CCCCATCAGTTCATCCAATCACAGTGCACGGTCCCC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGCCTGGAAAACTGAATaGATTATAAACCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAAWKTE*IINRSV
Trigger: CACCGAGCGGTTTATAATTCATTCAGTTTTCCAGGC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGGCCGTCCATCTCTGTaGGGGCCTGAAGGGATTTTA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGGRPSL*GPEGIL
Trigger: TAAAATCCCTTCAGGCCCTCACAGAGATGGACGGCC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTATTTGCTCCCGATGGTaGTCAGATGGCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGICSRW*SDGPRA
Trigger: TGCTCTGGGGCCATCTGATCACCATCGGGAGCAAAT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp ACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATCTCTCCAAGGGCTCCATaGAAAGAGGGCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: TCSSQELISSHHPTTSIISPRAP*KEGTPQ
Trigger: CTGTGGAGTGCCCTCTTTGCATGGAGCCCTTGGAGA...GATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGCCCATTTTCATCAGTaGGAATTCGATGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQAHFHQ*EFDANK
Trigger: TTTGTTGGCATCGAATTCGCACTGATGAAAATGGGC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGAGTGGTTTATAAACTaGTGGGTCTTCTGGATATGG +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQEWFIN*WVFWIW
Trigger: CCATATCCAGAAGACCCAGCAGTTTATAAACCACTC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTTTCCAACTGGCTCTGTaGAGCGGGATCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGFQLAL*SGICVL
Trigger: CAGCACACAGATCCCGCTGCACAGAGCCAGTTGGAA...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAACTGCTGGGTCTTCTaGATATGGCTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSANCWVF*IWLSTC
Trigger: GCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp ACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGTTCTGTTCATATTCTTaGTGTTTACCCGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: TAPGHPPLLSYTTCSSQEFCSYS*CLPACI
Trigger: AATGCAGGCGGGTAAACACCAAGAATATGAACAGAA...CTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGGGATAGGGTTGGGATaGCGAAAATTGTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAGIGLG*RKLSEN
Trigger: ATTCTCAGACAATTTTCGCCATCCCAACCCTATCCC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGTCACTGGATGTCTGTaGGGAGCTGGGGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQVTGCL*GAGERR
Trigger: CCTCCTTTCCCCAGCTCCCCACAGACATCCAGTGAC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATGAGGCTCTGTGGTTCTaGTGCTGTAGGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: HMLVSGAYLFPPPNDIYYEALWF*CCRPVT
Trigger: AGTGACTGGCCTACAGCACCAGAACCACAGAGCCTC...ATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGAGGCTCTGTGGTTCTaGTGCTGTAGGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGEALWF*CCRPVT
Trigger: AGTGACTGGCCTACAGCACCAGAACCACAGAGCCTC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AGCCACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAACCCAAGTCATCCTCTaGTTGTTTAGAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: SHRAWPPTSLKLYHMLVSTQVIL*LFRRTK
Trigger: TTTGGTTCTTCTAAACAACCAGAGGATGACTTGGGT...TGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCATGATGCTATTGCGTaGAAAGGCCATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAHDAIA*KGHPRI
Trigger: TATCCTTGGATGGCCTTTCCACGCAATAGCATCATG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGTGGGGAGTGGAAGCTaGAAGGGTTTGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGVGSGS*KGLKEE
Trigger: CTCCTCCTTCAAACCCTTCCAGCTTCCACTCCCCAC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCCGATGGTGATCAGATaGCCCCAGAGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGPMVIR*PQSSAI
Trigger: GATAGCACTGCTCTGGGGCCATCTGATCACCATCGG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTTCCGACCTTTACGGCTaGGAGAGAGACTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGSDLYG*ERDSQL
Trigger: AAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGTCGGA...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACTTCAGAACCGGGCCTaGTTGCTTCAGCGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCILQNRA*LLQRVR
Trigger: TCGGACTCGCTGAAGCAATCAGGCCCGGTTCTGAAG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTGAGAGCGTCTTCTaGCCGGATATAGGTTACATA +
Preference number: 4 (lower is better)
Translates to: PGHPPLLSYTTCSSQELISESVF*PDIGYI
Trigger: TATGTAACCTATATCCGGTCAGAAGACGCTCTCAGA...GATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAGGGGACCGTGCACTGTaGTTGGATGAACTGATGGGG +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIGDRAL*LDELMG
Trigger: CCCCATCAGTTCATCCAATCACAGTGCACGGTCCCC...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGGAGGATTGTCATCTTaGAGAGAGTCTAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQGGLSS*RESKLF
Trigger: AAACAGTTTAGACTCTCTTCAAGATGACAATCCTCC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGGCCGTCCATCTCTGTaGGGGCCTGAAGGGATTTTA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQGRPSL*GPEGIL
Trigger: TAAAATCCCTTCAGGCCCTCACAGAGATGGACGGCC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGCCACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCACATCTATTATCCTACTaGATGAGCCTATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SHRAWPPTSLKLYHMLVSHLLSY*MSLSSL
Trigger: AAGAGAAGATAGGCTCATTCAGTAGGATAATAGATG...TGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTCAGTGCGAATTCGATaGCAACAAAATCGGCAAATC +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSASVRIR*QQNRQI
Trigger: GATTTGCCGATTTTGTTGGCATCGAATTCGCACTGA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGAGTGGTTTATAAACTaGTGGGTCTTCTGGATATGG +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAEWFIN*WVFWIW
Trigger: CCATATCCAGAAGACCCAGCAGTTTATAAACCACTC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACCAAGGATAGCGGGCTaGCTGGCCTGGAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQPRIAG*LAWKTE
Trigger: TTCAGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQPRPVL*CGGRFK
Trigger: CTTGAATCTCCCGCCACAGCACAACACAGGTCTGGG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATTCCAACTGGCTCTGTaGAGCGGGATCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQFQLAL*SGICVL
Trigger: CAGCACACAGATCCCGCTGCACAGAGCCAGTTGGAA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGCATTTTCTAATGGTTaGTCCTCTTTGCCTAATGGC +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAAFSNG*SSLPNG
Trigger: GCCATTAGGCAAAGAGGAGCAACCATTAGAAAATGC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGGTTTATAAACTGCTaGGTCTTCTGGATATGGCTT +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQWFINC*VFWIWL
Trigger: AAGCCATATCCAGAAGACCCAGCAGTTTATAAACCA...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTTCTGTTCATATTCTTaGTGTTTACCCGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQFCSYS*CLPACI
Trigger: AATGCAGGCGGGTAAACACCAAGAATATGAACAGAA...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCTGTTAGATATCTGCTaGGAATTATCACCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSALLDIC*ELSPFP
Trigger: AGGGAACGGTGATAATTCCCAGCAGATATCTAACAG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCGGGATAGGGTTGGGATaGCGAAAATTGTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PGHPPLLSYTTCSSQELIGIGLG*RKLSEN
Trigger: ATTCTCAGACAATTTTCGCCATCCCAACCCTATCCC...GATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGAGGCTCTGTGGTTCTaGTGCTGTAGGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQEALWF*CCRPVT
Trigger: AGTGACTGGCCTACAGCACCAGAACCACAGAGCCTC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGACCCAAGTCATCCTCTaGTTGTTTAGAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQTQVIL*LFRRTK
Trigger: TTTGGTTCTTCTAAACAACCAGAGGATGACTTGGGT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGGTAGGGATTCCAACTaGCTCTGTGCAGCGGGATCT +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQGRDSN*LCAAGS
Trigger: AGATCCCGCTGCACAGAGCCAGTTGGAATCCCTACC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGTGGGGAGTGGAAGCTaGAAGGGTTTGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQVGSGS*KGLKEE
Trigger: CTCCTCCTTCAAACCCTTCCAGCTTCCACTCCCCAC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAGGGAGAAAACAGAGTaGGACAAATCCTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAREKTE*DKSCIF
Trigger: GAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCACTGTGGTTGGCGTTaGAGGGGGAAGAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGHCGWR*RGKKNW
Trigger: CCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGGCAGTGTTGGACGTTaGTGCACTGTGGTTGGCGTT +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQGSVGR*CTVVGV
Trigger: AACGCCAACCACAGTGCACCAACGTCCAACACTGCC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAAGGAAGTTCAGCACTaGAAGCTAAAATGTAGGACT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAKEVQH*KLKCRT
Trigger: AGTCCTACATTTTAGCTTTCAGTGCTGAACTTCCTT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACACACTGTATGGCTCTaGGAGCGTCTTCTGACCGGA +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIHTVWL*ERLLTG
Trigger: TCCGGTCAGAAGACGCTCTCAGAGCCATACAGTGTG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAGCATTTCCTCTTTTGTaGAGCTGGCCGCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIAFPLL*SWPPHP
Trigger: GGGATGAGGCGGCCAGCTTCACAAAAGAGGAAATGC...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp GGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTCACCGTTCCCTATACTaGGAGAATCTGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GHPPLLSYTTCSSQELISHRSLY*ENLKVC
Trigger: ACAAACCTTCAGATTCTCTCAGTATAGGGAACGGTG...AGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp CCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACTACTGGGATTGTTTCTaGTGTGAAGAGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPLLSYTTCSSQELISSHYWDCF*CEEALW
Trigger: CCACAGAGCCTCTTCACATCAGAAACAATCCCAGTA...GTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTAGGGAAGGTTGGTCTTaGACGGACAGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGREGWS*TDSSFS
Trigger: TGAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGGCGGTTGTAGTGTGTaGAGAGGAGTTCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGGGCSV*RGVLKR
Trigger: TCTCTTCAGAACTCCTCTTCACACACTACAACCGCC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTTCAGAACATAAGAGATaGGAAGGGAGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGSEHKR*EGSCGW
Trigger: CCACCCACAGCTCCCTTCTCATCTCTTATGTTCTGA...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTATGGTAATGACCCTGTaGTCGCATTGCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGMVMTL*SHCIWG
Trigger: ACCCCAGATGCAATGCGATCACAGGGTCATTACCAT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGCAATCTCACGTAAATaGACCTGGTTTTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAAISRK*TWFSNF
Trigger: GAAGTTTGAAAACCAGGTTCATTTACGTGAGATTGC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCGAGTGGTTTATAAACTaGTGGGTCTTCTGGATATGG +
Preference number: 4 (lower is better)
Translates to: PGHPPLLSYTTCSSQELIEWFIN*WVFWIW
Trigger: CCATATCCAGAAGACCCAGCAGTTTATAAACCACTC...GATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGATTCATGAAGATACATaGAGTCAGGTTTTGGACACT +
Preference number: 4 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQIHEDT*SQVLDT
Trigger: AGTGTCCAAAACCTGACTGCATGTATCTTCATGAAT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp GGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCTTCTCTTCAGCACTaGCAGTCTCTTCCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: GHPPLLSYTTCSSQELISSSLQH*QSLPLN
Trigger: ATTGAGAGGAAGAGACTGGCAGTGCTGAAGAGAAGA...AGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATACTCTCAGCTTTCGGTaGGTTCCACAGCCAGACGGG +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDTLSFR*VPQPDG
Trigger: CCCGTCTGGCTGTGGAACCCACCGAAAGCTGAGAGT...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTGGTTTATAAACTGCTaGGTCTTCTGGATATGGCTT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAWFINC*VFWIWL
Trigger: AAGCCATATCCAGAAGACCCAGCAGTTTATAAACCA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTTCTGTTCATATTCTTaGTGTTTACCCGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAFCSYS*CLPACI
Trigger: AATGCAGGCGGGTAAACACCAAGAATATGAACAGAA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAGAGGCTCTGTGGTTCTaGTGCTGTAGGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIEALWF*CCRPVT
Trigger: AGTGACTGGCCTACAGCACCAGAACCACAGAGCCTC...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATGTGAAGAGGCTCTGTaGTTCTGGTGCTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQCEEAL*FWCCRP
Trigger: TGGCCTACAGCACCAGAACCACAGAGCCTCTTCACA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTACCCAAGTCATCCTCTaGTTGTTTAGAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSATQVIL*LFRRTK
Trigger: TTTGGTTCTTCTAAACAACCAGAGGATGACTTGGGT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTACCTGTGTTGTGCTGTaGCGGGAGATTCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGTCVVL*REIQVQ
Trigger: TTGGACTTGAATCTCCCGCCACAGCACAACACAGGT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCTGAAGGGGGCGCTGTaGTGGGTCTGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLLKGAL*WVCDGA
Trigger: TGCTCCATCACAGACCCACCACAGCGCCCCCTTCAG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGGGTCTGCTAGGCGCTaGGATAAACCTACAACAAAG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQGSARR*DKPTTK
Trigger: CTTTGTTGTAGGTTTATCTCAGCGCCTAGCAGACCC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATCACACTGTATGGCTCTaGGAGCGTCTTCTGACCGGA +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDHTVWL*ERLLTG
Trigger: TCCGGTCAGAAGACGCTCTCAGAGCCATACAGTGTG...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGCATTTCCTCTTTTGTaGAGCTGGCCGCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPAFPLL*SWPPHP
Trigger: GGGATGAGGCGGCCAGCTTCACAAAAGAGGAAATGC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTTACTGGGATTGTTTCTaGTGTGAAGAGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGYWDCF*CEEALW
Trigger: CCACAGAGCCTCTTCACATCAGAAACAATCCCAGTA...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATGTGAAGAGGAGTTCTaGAGAGATGTGGGCGAAAGG +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQCEEEF*RDVGER
Trigger: CCTTTCGCCCACATCTCTTCAGAACTCCTCTTCACA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAATCTCTGTGAGGGCCTaGAGGGATTTTAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQISVRA*RDFSQC
Trigger: ACACTGGCTAAAATCCCTTCAGGCCCTCACAGAGAT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATAACGACCCGCCTGCCTTaGCTCGCTTTTCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFITTRLP*LAFPSA
Trigger: GGCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGT...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAACGACCCGCCTGCCTTaGCTCGCTTTTCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPTTRLP*LAFPSA
Trigger: GGCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCCTTCGCATCAGGACTaGGAGACATCTTCACGTTTA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGPSHQD*ETSSRL
Trigger: TAAACGTGAAGATGTCTCGCAGTCCTGATGCGAAGG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCTCAGTGCGAATTCGATaGCAACAAAATCGGCAAATC +
Preference number: 4 (lower is better)
Translates to: LYHMLVSGAYLFPPPNDISVRIR*QQNRQI
Trigger: GATTTGCCGATTTTGTTGGCATCGAATTCGCACTGA...GATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp GCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATGCCCATTTTCATCAGTaGGAATTCGATGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: AIPHARLRSLSLPTTQRHAHFHQ*EFDANK
Trigger: TTTGTTGGCATCGAATTCGCACTGATGAAAATGGGC...ATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTATTCATGAAGATACATaGAGTCAGGTTTTGGACACT +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAIHEDT*SQVLDT
Trigger: AGTGTCCAAAACCTGACTGCATGTATCTTCATGAAT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGCTCTGTGGTTCTGGTaGTGTAGGCCAGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPALWFW*CRPVTG
Trigger: TCCAGTGACTGGCCTACAGCACCAGAACCACAGAGC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCACCAAGGATAGCGGGCTaGCTGGCCTGGAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPPRIAG*LAWKTE
Trigger: TTCAGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGG...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCACCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPPRPVL*CGGRFK
Trigger: CTTGAATCTCCCGCCACAGCACAACACAGGTCTGGG...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAATGGTTGCTCCTCTTTaGCTAATGGCGGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQMVAPL*LMAVQC
Trigger: ACACTGGACCGCCATTAGGCAAAGAGGAGCAACCAT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGGGTTAAGTAAAAGCTaGAGGCAAGGAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGGLSKS*RQGGQR
Trigger: TCTCTGACCTCCTTGCCTGCAGCTTTTACTTAACCC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCTGTCTTTTCAATACTaGACAAACGTCCAGAAACTA +
Preference number: 4 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSALSFQY*TNVQKL
Trigger: TAGTTTCTGGACGTTTGTGCAGTATTGAAAAGACAG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCTCTTCCTGGGAGAGTaGTTTATAAACTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGLFLGE*FINCWV
Trigger: GACCCAGCAGTTTATAAACCACTCTCCCAGGAAGAG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAAGGTTACATAAGCACTaGCACTTGGACCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQRLHKH*HLDPVS
Trigger: GCTCACAGGGTCCAAGTGCCAGTGCTTATGTAACCT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCTGAAGGTTTGTCAATaGGGGTATCGTACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGLKVCQ*GYRTSA
Trigger: TGCAGAGGTACGATACCCCCATTGACAAACCTTCAG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCGTCACTGGATGTCTGTaGGGAGCTGGGGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSVTGCL*GAGERR
Trigger: CCTCCTTTCCCCAGCTCCCCACAGACATCCAGTGAC...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGAGGCTCTGTGGTTCTaGTGCTGTAGGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPEALWF*CCRPVT
Trigger: AGTGACTGGCCTACAGCACCAGAACCACAGAGCCTC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAACCTGTGTTGTGCTGTaGCGGGAGATTCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQTCVVL*REIQVQ
Trigger: TTGGACTTGAATCTCCCGCCACAGCACAACACAGGT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACAGGCCACAGTAGTGTaGAGACTTGTAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIQATVV*RLVGCC
Trigger: ACAGCAGCCTACAAGTCTCCACACTACTGTGGCCTG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCAGGCTGTCGGTGGTaGCAGTGTTGGACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLSGCRW*QCWTLV
Trigger: CACCAACGTCCAACACTGCCACCACCGACAGCCTGA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCATCCGACCTTTACGGCTaGGAGAGAGACTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPSDLYG*ERDSQL
Trigger: AAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGTCGGA...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGCATTTCCTCTTTTGTaGAGCTGGCCGCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLAFPLL*SWPPHP
Trigger: GGGATGAGGCGGCCAGCTTCACAAAAGAGGAAATGC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCTAAGGCTTTTCGAGTaGCATCGAAGGGATCAAAAC +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGLRLFE*HRRDQN
Trigger: GTTTTGATCCCTTCGATGTCACTCGAAAAGCCTTAG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAGGCGGTTGTAGTGTGTaGAGAGGAGTTCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIGGCSV*RGVLKR
Trigger: TCTCTTCAGAACTCCTCTTCACACACTACAACCGCC...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACCTCTGGGGCAAGACTaGAAAGGTACTATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQPLGQD*KGTIER
Trigger: TCTCTCAATAGTACCTTTTCAGTCTTGCCCCAGAGG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATATCTCAAGAGGAGGTGTaGCTTTCCCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCISQEEV*LSLSSQ
Trigger: CTGGGAAGAAAGGGAAAGTCACACCTCCTCTTGAGA...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCAGAACCGGGCCTGATTaGTTCAGCGAGTCCGACCTT +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSRTGPD*FSESDL
Trigger: AAGGTCGGACTCGCTGAAGCAATCAGGCCCGGTTCT...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCACGACCCGCCTGCCTTaGCTCGCTTTTCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFTTRLP*LAFPSA
Trigger: GGCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCTCTCCAAGGGCTCCATaGAAAGAGGGCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSSPRAP*KEGTPQ
Trigger: CTGTGGAGTGCCCTCTTTGCATGGAGCCCTTGGAGA...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTCCAAGGGCTCCATaGAAAGAGGGCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLSPRAP*KEGTPQ
Trigger: CTGTGGAGTGCCCTCTTTGCATGGAGCCCTTGGAGA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCCAAGGATAGCGGGCTaGCTGGCCTGGAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLPRIAG*LAWKTE
Trigger: TTCAGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTTCCAACTGGCTCTGTaGAGCGGGATCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLFQLAL*SGICVL
Trigger: CAGCACACAGATCCCGCTGCACAGAGCCAGTTGGAA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp GGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTGGTTTATAAACTGCTaGGTCTTCTGGATATGGCTT +
Preference number: 4 (lower is better)
Translates to: GHPPLLSYTTCSSQELISWFINC*VFWIWL
Trigger: AAGCCATATCCAGAAGACCCAGCAGTTTATAAACCA...AGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp CTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCATCGTACCTCTGCAGTaGTGTCACTTTGTTCTTATT +
Preference number: 4 (lower is better)
Translates to: LYHMLVSGAYLFPPPNDIIVPLQ*CHFVLI
Trigger: AATAAGAACAAAGTGACACCACTGCAGAGGTACGAT...GATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp CCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCTGTTAGATATCTGCTaGGAATTATCACCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PPLLSYTTCSSQELISSHLLDIC*ELSPFP
Trigger: AGGGAACGGTGATAATTCCCAGCAGATATCTAACAG...GTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATCAGGAATCCAGAGCCTaGACCTTTGGCGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDQESRA*TFGGCS
Trigger: ACTACAACCGCCAAAGGTCCAGGCTCTGGATTCCTG...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCATGATGCTATTGCGTaGAAAGGCCATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGHDAIA*KGHPRI
Trigger: TATCCTTGGATGGCCTTTCCACGCAATAGCATCATG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGGTAGGGATTCCAACTaGCTCTGTGCAGCGGGATCT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLGRDSN*LCAAGS
Trigger: AGATCCCGCTGCACAGAGCCAGTTGGAATCCCTACC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCCGATGGTGATCAGATaGCCCCAGAGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLPMVIR*PQSSAI
Trigger: GATAGCACTGCTCTGGGGCCATCTGATCACCATCGG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCTCCGACCTTTACGGCTaGGAGAGAGACTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSSDLYG*ERDSQL
Trigger: AAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGTCGGA...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCCGACCTTTACGGCTaGGAGAGAGACTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLSDLYG*ERDSQL
Trigger: AAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGTCGGA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATACTTCAGAACCGGGCCTaGTTGCTTCAGCGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFILQNRA*LLQRVR
Trigger: TCGGACTCGCTGAAGCAATCAGGCCCGGTTCTGAAG...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACTTCAGAACCGGGCCTaGTTGCTTCAGCGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLQNRA*LLQRVR
Trigger: TCGGACTCGCTGAAGCAATCAGGCCCGGTTCTGAAG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGGGTCTGCTAGGCGCTaGGATAAACCTACAACAAAG +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPGSARR*DKPTTK
Trigger: CTTTGTTGTAGGTTTATCTCAGCGCCTAGCAGACCC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATCTGAGAGCGTCTTCTaGCCGGATATAGGTTACATA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQSESVF*PDIGYI
Trigger: TATGTAACCTATATCCGGTCAGAAGACGCTCTCAGA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp ACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATCTATACTGAGAGAATCTaGAGGTTTGTCAATGGGGGT +
Preference number: 4 (lower is better)
Translates to: TCSSQELISSHHPTTSIIYTERI*RFVNGG
Trigger: ACCCCCATTGACAAACCTTCAGATTCTCTCAGTATA...GATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCATGCACTGTGATTGGATaGACTGATGGGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPCTVIG*TDGDDW
Trigger: CCAGTCATCCCCATCAGTTCATCCAATCACAGTGCA...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGGGGACCGTGCACTGTaGTTGGATGAACTGATGGGG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPGDRAL*LDELMG
Trigger: CCCCATCAGTTCATCCAATCACAGTGCACGGTCCCC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATATACTGGGATTGTTTCTaGTGTGAAGAGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIYWDCF*CEEALW
Trigger: CCACAGAGCCTCTTCACATCAGAAACAATCCCAGTA...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAAGGGAAGGTTGGTCTTaGACGGACAGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPREGWS*TDSSFS
Trigger: TGAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCT...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACTGTGGGTGGTGGGCTaGGAGGGAGAAAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLWVVG*EGENRV
Trigger: CACTCTGTTTTCTCCCTCTCAGCCCACCACCCACAG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGCCCATTTTCATCAGTaGGAATTCGATGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGAHFHQ*EFDANK
Trigger: TTTGTTGGCATCGAATTCGCACTGATGAAAATGGGC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGGGGTATCGTACCTCTaGAGTGGTGTCACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPGVSYL*SGVTLF
Trigger: GAACAAAGTGACACCACTGCAGAGGTACGATACCCC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315544.6
CDS-3UTR GCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAAAGCCAAAAGCTGCTTaGCAGTCTGTAGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQKPKAA*QSVEDD
Trigger: ATCATCCTCTACAGACTGGCAAGCAGCTTTTGGCTT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTCCAAGGATAGCGGGCTaGCTGGCCTGGAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSPRIAG*LAWKTE
Trigger: TTCAGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGG...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATACACCTCTTCTTCCCCTaGTACAGGGATCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIHLFFP*YRDPSQ
Trigger: CTGGGAGGGATCCCTGTAGCAGGGGAAGAAGAGGTG...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAAGTGCTATCTCAGAGTaGCCTCGTCAGGTGAATTTA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQSAISE*PRQVNL
Trigger: TAAATTCACCTGACGAGGGCACTCTGAGATAGCACT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAACTCTCAGCTTTCGGTaGGTTCCACAGCCAGACGGG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPTLSFR*VPQPDG
Trigger: CCCGTCTGGCTGTGGAACCCACCGAAAGCTGAGAGT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CAGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATCCTACTGAATGAGAACTGCTGGGTCTTCTaGATATGGCTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: QELISSHHPTTSIILLNENCWVF*IWLSTC
Trigger: GCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTT...CTCATTCAGTAGGATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACTGAAGGTTTGTCAATaGGGGTATCGTACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCILKVCQ*GYRTSA
Trigger: TGCAGAGGTACGATACCCCCATTGACAAACCTTCAG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315544.6
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCTGTTAGATATCTGCTaGGAATTATCACCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGLLDIC*ELSPFP
Trigger: AGGGAACGGTGATAATTCCCAGCAGATATCTAACAG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGGGATAGGGTTGGGATaGCGAAAATTGTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQGIGLG*RKLSEN
Trigger: ATTCTCAGACAATTTTCGCCATCCCAACCCTATCCC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTGTGAAGAGGCTCTGTaGTTCTGGTGCTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLCEEAL*FWCCRP
Trigger: TGGCCTACAGCACCAGAACCACAGAGCCTCTTCACA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCAGGAATCCAGAGCCTaGACCTTTGGCGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSQESRA*TFGGCS
Trigger: ACTACAACCGCCAAAGGTCCAGGCTCTGGATTCCTG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCAGGAATCCAGAGCCTaGACCTTTGGCGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLQESRA*TFGGCS
Trigger: ACTACAACCGCCAAAGGTCCAGGCTCTGGATTCCTG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAGGGCTCTGGCAAATCTaGGCAAACTACCTGATGATT +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIGLWQI*ANYLMI
Trigger: AATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCC...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAACCTGTGATGATGGCTaGGTCTGTCCAGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPTCDDG*VCPAAR
Trigger: CCTGGCAGCTGGACAGACCCAGCCATCATCACAGGT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTAAGGAAGTTCAGCACTaGAAGCTAAAATGTAGGACT +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGKEVQH*KLKCRT
Trigger: AGTCCTACATTTTAGCTTTCAGTGCTGAACTTCCTT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATATCATCCCCCAATTCATaGAGATACATGCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCISSPNS*RYMQSG
Trigger: ACCTGACTGCATGTATCTTCATGAATTGGGGGATGA...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGCATTTCCTCTTTTGTaGAGCTGGCCGCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPAFPLL*SWPPHP
Trigger: GGGATGAGGCGGCCAGCTTCACAAAAGAGGAAATGC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACACCGTTCCCTATACTaGGAGAATCTGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIHRSLY*ENLKVC
Trigger: ACAAACCTTCAGATTCTCTCAGTATAGGGAACGGTG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTGCACTGTGATTGGATaGACTGATGGGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLCTVIG*TDGDDW
Trigger: CCAGTCATCCCCATCAGTTCATCCAATCACAGTGCA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCGGGGACCGTGCACTGTaGTTGGATGAACTGATGGGG +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFGDRAL*LDELMG
Trigger: CCCCATCAGTTCATCCAATCACAGTGCACGGTCCCC...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGAGGGAAGGTTGGTCTTaGACGGACAGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLREGWS*TDSSFS
Trigger: TGAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGGCGGTTGTAGTGTGTaGAGAGGAGTTCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLGGCSV*RGVLKR
Trigger: TCTCTTCAGAACTCCTCTTCACACACTACAACCGCC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACCTGGCCTGGAAAACTaGATGAATTATAAACCGCTC +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIPGLEN*MNYKPL
Trigger: GAGCGGTTTATAATTCATTCAGTTTTCCAGGCCAGG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCATGTGGTTCAAGTGCATaGTGCTATTGCGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPCGSSA*CYCVER
Trigger: CCTTTCCACGCAATAGCATCATGCACTTGAACCACA...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGGAGGATTGTCATCTTaGAGAGAGTCTAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGGGLSS*RESKLF
Trigger: AAACAGTTTAGACTCTCTTCAAGATGACAATCCTCC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGCAATCTCACGTAAATaGACCTGGTTTTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGAISRK*TWFSNF
Trigger: GAAGTTTGAAAACCAGGTTCATTTACGTGAGATTGC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTACAGAGGAGAAGGACTaGAGAAATGACTTACATTTC +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGTEEKD*RNDLHF
Trigger: GAAATGTAAGTCATTTCTTCAGTCCTTCTCCTCTGT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAAGAAGATCCAGGCAATaGAAGGCTAACACTGAATGC +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIRRSRQ*KANTEC
Trigger: GCATTCAGTGTTAGCCTTTCATTGCCTGGATCTTCT...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCACCTTCGCATCAGGACTaGGAGACATCTTCACGTTTA +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPPSHQD*ETSSRL
Trigger: TAAACGTGAAGATGTCTCGCAGTCCTGATGCGAAGG...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATCAGTGCGAATTCGATaGCAACAAAATCGGCAAATC +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQSVRIR*QQNRQI
Trigger: GATTTGCCGATTTTGTTGGCATCGAATTCGCACTGA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGCTGTGTGGTTCAAGTaGATGATGCTATTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPAVWFK*MMLLRG
Trigger: TCCACGCAATAGCATCATGCACTTGAACCACACAGC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATGCTGTGTGGTTCAAGTaGATGATGCTATTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDAVWFK*MMLLRG
Trigger: TCCACGCAATAGCATCATGCACTTGAACCACACAGC...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPPRPVL*CGGRFK
Trigger: CTTGAATCTCCCGCCACAGCACAACACAGGTCTGGG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCACCTCTTCTTCCCCTaGTACAGGGATCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFHLFFP*YRDPSQ
Trigger: CTGGGAGGGATCCCTGTAGCAGGGGAAGAAGAGGTG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAGACGCTGGAATACCTaGTACAGGGATCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPRRWNT*YRDPSQ
Trigger: CTGGGAGGGATCCCTGTAGCAGGTATTCCAGCGTCT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423368.6
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGATGGTTGCTCCTCTTTaGCTAATGGCGGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLMVAPL*LMAVQC
Trigger: ACACTGGACCGCCATTAGGCAAAGAGGAGCAACCAT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTACACAATCAAGTCCTTaGCATCAACTTGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGTQSSP*HQLAKR
Trigger: TCTTTTGGCAAGTTGATGGCAAGGACTTGATTGTGT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCACTCTCAGCTTTCGGTaGGTTCCACAGCCAGACGGG +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIITLSFR*VPQPDG
Trigger: CCCGTCTGGCTGTGGAACCCACCGAAAGCTGAGAGT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAAACTGCTGGGTCTTCTaGATATGGCTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCINCWVF*IWLSTC
Trigger: GCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTT...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTATCGTACCTCTGCAGTaGTGTCACTTTGTTCTTATT +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGIVPLQ*CHFVLI
Trigger: AATAAGAACAAAGTGACACCACTGCAGAGGTACGAT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCGTCACTGGATGTCTGTaGGGAGCTGGGGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIVTGCL*GAGERR
Trigger: CCTCCTTTCCCCAGCTCCCCACAGACATCCAGTGAC...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGAGGCTCTGTGGTTCTaGTGCTGTAGGCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPEALWF*CCRPVT
Trigger: AGTGACTGGCCTACAGCACCAGAACCACAGAGCCTC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGTGGGGTTTGCTGTGTaGTTCAAGTGCATGATGCTA +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPVGFAV*FKCMML
Trigger: TAGCATCATGCACTTGAACCACACAGCAAACCCCAC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTAATTACTATTTGAGGTaGGGTTTGCTGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGNYYLR*GLLCGS
Trigger: TGAACCACACAGCAAACCCCACCTCAAATAGTAATT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACCTGTGTTGTGCTGTaGCGGGAGATTCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSTCVVL*REIQVQ
Trigger: TTGGACTTGAATCTCCCGCCACAGCACAACACAGGT...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGACCTGTGTTGTGCTGTaGCGGGAGATTCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLTCVVL*REIQVQ
Trigger: TTGGACTTGAATCTCCCGCCACAGCACAACACAGGT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACCTTGTTGTAATGAATaGGAAGAGGTTGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIPCCNE*EEVDSG
Trigger: GCCACTGTCAACCTCTTCCCATTCATTACAACAAGG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCTGAAGGTTTGTCAATaGGGCTCTGCAGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSLKVCQ*GSAVVS
Trigger: TGACACCACTGCAGAGCCCCATTGACAAACCTTCAG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCTGAAGGTTTGTCAATaGGGCTCTGCAGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLLKVCQ*GSAVVS
Trigger: TGACACCACTGCAGAGCCCCATTGACAAACCTTCAG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451834.5
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGGCAGTGTTGGACGTTaGTGCACTGTGGTTGGCGTT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPGSVGR*CTVVGV
Trigger: AACGCCAACCACAGTGCACCAACGTCCAACACTGCC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCATCCGACCTTTACGGCTaGGAGAGAGACTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPSDLYG*ERDSQL
Trigger: AAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGTCGGA...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCATCTGAGAGCGTCTTCTaGCCGGATATAGGTTACATA +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPSESVF*PDIGYI
Trigger: TATGTAACCTATATCCGGTCAGAAGACGCTCTCAGA...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTTGCACTGTGATTGGATaGACTGATGGGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSCTVIG*TDGDDW
Trigger: CCAGTCATCCCCATCAGTTCATCCAATCACAGTGCA...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCTACTGGGATTGTTTCTaGTGTGAAGAGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSYWDCF*CEEALW
Trigger: CCACAGAGCCTCTTCACATCAGAAACAATCCCAGTA...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTTGTGAAGAGGAGTTCTaGAGAGATGTGGGCGAAAGG +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSCEEEF*RDVGER
Trigger: CCTTTCGCCCACATCTCTTCAGAACTCCTCTTCACA...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTGGCGGTTGTAGTGTGTaGAGAGGAGTTCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSGGCSV*RGVLKR
Trigger: TCTCTTCAGAACTCCTCTTCACACACTACAACCGCC...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCCTCTGGGGCAAGACTaGAAAGGTACTATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSPLGQD*KGTIER
Trigger: TCTCTCAATAGTACCTTTTCAGTCTTGCCCCAGAGG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAGCCTGGAAAACTGAATaGATTATAAACCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPAWKTE*IINRSV
Trigger: CACCGAGCGGTTTATAATTCATTCAGTTTTCCAGGC...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATGCCTGGAAAACTGAATaGATTATAAACCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDAWKTE*IINRSV
Trigger: CACCGAGCGGTTTATAATTCATTCAGTTTTCCAGGC...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTGTGGTTCAAGTGCATaGTGCTATTGCGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLCGSSA*CYCVER
Trigger: CCTTTCCACGCAATAGCATCATGCACTTGAACCACA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAAGTGCCCTCGTCAGGTaGATTTATGGTAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQSALVR*IYGKTK
Trigger: TTTTGTTTTACCATAAATTCACCTGACGAGGGCACT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCACAGGAGACATAAGTaGAGTCTTGGCCTCTTACAG +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSHRRHK*SLGLLQ
Trigger: CTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATTTTCCACGCTGGCTATaGATGAGAAAGGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDFPRWL*MRKERS
Trigger: GCTTCTTTCCTTTCTCATTCATAGCCAGCGTGGAAA...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAGAACCGGGCCTGATTaGTTCAGCGAGTCCGACCTT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIRTGPD*FSESDL
Trigger: AAGGTCGGACTCGCTGAAGCAATCAGGCCCGGTTCT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCCTTCGCATCAGGACTaGGAGACATCTTCACGTTTA +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSPSHQD*ETSSRL
Trigger: TAAACGTGAAGATGTCTCGCAGTCCTGATGCGAAGG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCCTTCGCATCAGGACTaGGAGACATCTTCACGTTTA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLPSHQD*ETSSRL
Trigger: TAAACGTGAAGATGTCTCGCAGTCCTGATGCGAAGG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAGAGTGGTTTATAAACTaGTGGGTCTTCTGGATATGG +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIEWFIN*WVFWIW
Trigger: CCATATCCAGAAGACCCAGCAGTTTATAAACCACTC...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATAAGCCAAAAGCTGCTTaGCAGTCTGTAGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDKPKAA*QSVEDD
Trigger: ATCATCCTCTACAGACTGGCAAGCAGCTTTTGGCTT...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGATTGGCATTTGTAGCTaGAGCAGGATGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLIGICS*SRMQES
Trigger: GGATTCCTGCATCCTGCTGCAGCTACAAATGCCAAT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFPRPVL*CGGRFK
Trigger: CTTGAATCTCCCGCCACAGCACAACACAGGTCTGGG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACTTGTCAATGGGGCTCTaGAGTGGTGTCACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SSTGDISEVLASYSKNENLSMGL*SGVTLF
Trigger: GAACAAAGTGACACCACTGCAGAGCCCCATTGACAA...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAAACTGCTGGGTCTTCTaGATATGGCTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPNCWVF*IWLSTC
Trigger: GCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTT...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATATGTGAAGAGGCTCTGTaGTTCTGGTGCTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFICEEAL*FWCCRP
Trigger: TGGCCTACAGCACCAGAACCACAGAGCCTCTTCACA...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCGTGGGGTTTGCTGTGTaGTTCAAGTGCATGATGCTA +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSVGFAV*FKCMML
Trigger: TAGCATCATGCACTTGAACCACACAGCAAACCCCAC...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCAGGTTGACAGTGGCATaGTCGAAACCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSRLTVA*SKPSPL
Trigger: AAGAGGTGAAGGTTTCGACCATGCCACTGTCAACCT...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATACAGGCCACAGTAGTGTaGAGACTTGTAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIQATVV*RLVGCC
Trigger: ACAGCAGCCTACAAGTCTCCACACTACTGTGGCCTG...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
3UTR CAA 72 bp ATCTCTCAACACCAAGGAGCAAATGGCACTAACCACTaGCTATGGCTTTGTAAGAAGATCCAGGCAATGAAA +
Preference number: 4 (lower is better)
Translates to: ISQHQGANGTNH*LWLCKKIQAMK
Trigger: TTTCATTGCCTGGATCTTCTTACAAAGCCATAGCAAGTGGTTAGTGCCATTTGCTCCTTGGTGTTGAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGGGTCTGCTAGGCGCTaGGATAAACCTACAACAAAG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPGSARR*DKPTTK
Trigger: CTTTGTTGTAGGTTTATCTCAGCGCCTAGCAGACCC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACTCTGAGAGCGTCTTCTaGCCGGATATAGGTTACATA +
Preference number: 4 (lower is better)
Translates to: SSTGDISEVLASYSKNENSESVF*PDIGYI
Trigger: TATGTAACCTATATCCGGTCAGAAGACGCTCTCAGA...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCATGCACTGTGATTGGATaGACTGATGGGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPCTVIG*TDGDDW
Trigger: CCAGTCATCCCCATCAGTTCATCCAATCACAGTGCA...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCTAAGGCTTTTCGAGTaGCATCGAAGGGATCAAAAC +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLLRLFE*HRRDQN
Trigger: GTTTTGATCCCTTCGATGTCACTCGAAAAGCCTTAG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCATGTGAAGAGGAGTTCTaGAGAGATGTGGGCGAAAGG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPCEEEF*RDVGER
Trigger: CCTTTCGCCCACATCTCTTCAGAACTCCTCTTCACA...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGCCTGGAAAACTGAATaGATTATAAACCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLAWKTE*IINRSV
Trigger: CACCGAGCGGTTTATAATTCATTCAGTTTTCCAGGC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCCTGGCCTGGAAAACTaGATGAATTATAAACCGCTC +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLPGLEN*MNYKPL
Trigger: GAGCGGTTTATAATTCATTCAGTTTTCCAGGCCAGG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCACCAACAATATCCTTCTaGGCATTAAATGACACCACC +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPPTISF*ALNDTT
Trigger: GGTGGTGTCATTTAATGCTCAGAAGGATATTGTTGG...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATATATGGTCATGTTTTCTaGATCAGCTTTTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIYGHVF*ISFCPL
Trigger: CAGTGGACAAAAGCTGATTCAGAAAACATGACCATA...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATATCTCAAGAGGAGGTGTaGCTTTCCCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFISQEEV*LSLSSQ
Trigger: CTGGGAAGAAAGGGAAAGTCACACCTCCTCTTGAGA...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATTATACTGAGAGAATCTaGAGGTTTGTCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDYTERI*RFVNGA
Trigger: AGCCCCATTGACAAACCTTCAGATTCTCTCAGTATA...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAATCTCTGTGAGGGCCTaGAGGGATTTTAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPISVRA*RDFSQC
Trigger: ACACTGGCTAAAATCCCTTCAGGCCCTCACAGAGAT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCATCAGTGCGAATTCGATaGCAACAAAATCGGCAAATC +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPSVRIR*QQNRQI
Trigger: GATTTGCCGATTTTGTTGGCATCGAATTCGCACTGA...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATGAGTGGTTTATAAACTaGTGGGTCTTCTGGATATGG +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDEWFIN*WVFWIW
Trigger: CCATATCCAGAAGACCCAGCAGTTTATAAACCACTC...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp CAGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATCCTACTGAATGAGATTCATGAAGATACATaGAGTCAGGTTTTGGACACT +
Preference number: 4 (lower is better)
Translates to: QELISSHHPTTSIILLNEIHEDT*SQVLDT
Trigger: AGTGTCCAAAACCTGACTGCATGTATCTTCATGAAT...CTCATTCAGTAGGATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGGGGTATCGTACCTCTaGAGTGGTGTCACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPGVSYL*SGVTLF
Trigger: GAACAAAGTGACACCACTGCAGAGGTACGATACCCC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGAAGCCAAAAGCTGCTTaGCAGTCTGTAGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLKPKAA*QSVEDD
Trigger: ATCATCCTCTACAGACTGGCAAGCAGCTTTTGGCTT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTATGCAAAAATCCAGTTaGCCATGCAAGCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSMQKSS*PCKHPR
Trigger: TCTGGGGTGCTTGCATGGGCAACTGGATTTTTGCAT...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAATGGTTGCTCCTCTTTaGCTAATGGCGGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPMVAPL*LMAVQC
Trigger: ACACTGGACCGCCATTAGGCAAAGAGGAGCAACCAT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGCCCTTAGCCCGTCCTaGCATTCCTTCATATTTAAA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLALSPS*HSFIFK
Trigger: TTTAAATATGAAGGAATGGCAGGACGGGCTAAGGGC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCTGGGTCTTCTGGATATaGCTTTCTACATGCAGGACA +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSWVFWI*LSTCRT
Trigger: TGTCCTGCATGTAGAAAGCCATATCCAGAAGACCCA...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTCTCTTCCTGGGAGAGTaGTTTATAAACTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSLFLGE*FINCWV
Trigger: GACCCAGCAGTTTATAAACCACTCTCCCAGGAAGAG...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCGGGATAGGGTTGGGATaGCGAAAATTGTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSGIGLG*RKLSEN
Trigger: ATTCTCAGACAATTTTCGCCATCCCAACCCTATCCC...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCTGTGAAGAGGCTCTGTaGTTCTGGTGCTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFCEEAL*FWCCRP
Trigger: TGGCCTACAGCACCAGAACCACAGAGCCTCTTCACA...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACCATGATGCTATTGCGTaGAAAGGCCATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: SSTGDISEVLASYSKNENHDAIA*KGHPRI
Trigger: TATCCTTGGATGGCCTTTCCACGCAATAGCATCATG...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCATGATGCTATTGCGTaGAAAGGCCATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLHDAIA*KGHPRI
Trigger: TATCCTTGGATGGCCTTTCCACGCAATAGCATCATG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACCCTTGTTGTAATGAATaGGAAGAGGTTGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSTGDISEVLASYSKNENPCCNE*EEVDSG
Trigger: GCCACTGTCAACCTCTTCCCATTCATTACAACAAGG...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAGAGGAACGTTTATATTaGCTCTTCTGGGTGTATACA +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIEERLY*LFWVYT
Trigger: TGTATACACCCAGAAGAGCCAATATAAACGTTCCTC...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCGGGTCTGCTAGGCGCTaGGATAAACCTACAACAAAG +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFGSARR*DKPTTK
Trigger: CTTTGTTGTAGGTTTATCTCAGCGCCTAGCAGACCC...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTATACTGAGAGAATCTaGAGGTTTGTCAATGGGGGT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLYTERI*RFVNGG
Trigger: ACCCCCATTGACAAACCTTCAGATTCTCTCAGTATA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR TCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTCTAAGGCTTTTCGAGTaGCATCGAAGGGATCAAAAC +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSLRLFE*HRRDQN
Trigger: GTTTTGATCCCTTCGATGTCACTCGAAAAGCCTTAG...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAGGGAAGGTTGGTCTTaGACGGACAGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIREGWS*TDSSFS
Trigger: TGAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCTGTGAAGAGGAGTTCTaGAGAGATGTGGGCGAAAGG +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFCEEEF*RDVGER
Trigger: CCTTTCGCCCACATCTCTTCAGAACTCCTCTTCACA...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACCTCTGGGGCAAGACTaGAAAGGTACTATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPPLGQD*KGTIER
Trigger: TCTCTCAATAGTACCTTTTCAGTCTTGCCCCAGAGG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATACCTCTGGGGCAAGACTaGAAAGGTACTATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIPLGQD*KGTIER
Trigger: TCTCTCAATAGTACCTTTTCAGTCTTGCCCCAGAGG...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTCCTGGCCTGGAAAACTaGATGAATTATAAACCGCTC +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSPGLEN*MNYKPL
Trigger: GAGCGGTTTATAATTCATTCAGTTTTCCAGGCCAGG...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTATACTGAGAGAATCTaGAGGTTTGTCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLYTERI*RFVNGA
Trigger: AGCCCCATTGACAAACCTTCAGATTCTCTCAGTATA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451834.5
CDS-3UTR TCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACAGTTTCCCTTGCACATaGTGCATCATGCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: SSTGDISEVLASYSKNENSFPCT*CIMQEF
Trigger: AAATTCCTGCATGATGCATCATGTGCAAGGGAAACT...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAATTGGCATTTGTAGCTaGAGCAGGATGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPIGICS*SRMQES
Trigger: GGATTCCTGCATCCTGCTGCAGCTACAAATGCCAAT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATAATTGGCATTTGTAGCTaGAGCAGGATGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIIGICS*SRMQES
Trigger: GGATTCCTGCATCCTGCTGCAGCTACAAATGCCAAT...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGCTGTGTGGTTCAAGTaGATGATGCTATTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPAVWFK*MMLLRG
Trigger: TCCACGCAATAGCATCATGCACTTGAACCACACAGC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCATTGTCAATGGGGCTCTaGAGTGGTGTCACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLSMGL*SGVTLF
Trigger: GAACAAAGTGACACCACTGCAGAGCCCCATTGACAA...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451834.5
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGCATTTTCTAATGGTTaGTCCTCTTTGCCTAATGGC +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLAFSNG*SSLPNG
Trigger: GCCATTAGGCAAAGAGGAGCAACCATTAGAAAATGC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCATGGTTTATAAACTGCTaGGTCTTCTGGATATGGCTT +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPWFINC*VFWIWL
Trigger: AAGCCATATCCAGAAGACCCAGCAGTTTATAAACCA...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACTCTTCCTGGGAGAGTaGTTTATAAACTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLFLGE*FINCWV
Trigger: GACCCAGCAGTTTATAAACCACTCTCCCAGGAAGAG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAGGTTACATAAGCACTaGCACTTGGACCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIRLHKH*HLDPVS
Trigger: GCTCACAGGGTCCAAGTGCCAGTGCTTATGTAACCT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCAGGTTACATAAGCACTaGCACTTGGACCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFRLHKH*HLDPVS
Trigger: GCTCACAGGGTCCAAGTGCCAGTGCTTATGTAACCT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACTGAAGGTTTGTCAATaGGGGTATCGTACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLKVCQ*GYRTSA
Trigger: TGCAGAGGTACGATACCCCCATTGACAAACCTTCAG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCTGTTAGATATCTGCTaGGAATTATCACCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLLLDIC*ELSPFP
Trigger: AGGGAACGGTGATAATTCCCAGCAGATATCTAACAG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCTGTTAGATATCTGCTaGGAATTATCACCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSLLDIC*ELSPFP
Trigger: AGGGAACGGTGATAATTCCCAGCAGATATCTAACAG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAACCCAAGTCATCCTCTaGTTGTTTAGAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPTQVIL*LFRRTK
Trigger: TTTGGTTCTTCTAAACAACCAGAGGATGACTTGGGT...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGTGGGGTTTGCTGTGTaGTTCAAGTGCATGATGCTA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPVGFAV*FKCMML
Trigger: TAGCATCATGCACTTGAACCACACAGCAAACCCCAC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCACCTGTGTTGTGCTGTaGCGGGAGATTCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIITCVVL*REIQVQ
Trigger: TTGGACTTGAATCTCCCGCCACAGCACAACACAGGT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACATGTAGGCAGAATATaGTCATGTTTTCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIHVGRI*SCFLNQ
Trigger: CTGATTCAGAAAACATGACCATATTCTGCCTACATG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGAAGCTGAATACAAGATaGATGCTAGGACCACTGCTT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLKLNTR*MLGPLL
Trigger: AAGCAGTGGTCCTAGCATCCATCTTGTATTCAGCTT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGAAGGAAGTTCAGCACTaGAAGCTAAAATGTAGGACT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLKEVQH*KLKCRT
Trigger: AGTCCTACATTTTAGCTTTCAGTGCTGAACTTCCTT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACAAGGAAGTTCAGCACTaGAAGCTAAAATGTAGGACT +
Preference number: 4 (lower is better)
Translates to: SSTGDISEVLASYSKNENKEVQH*KLKCRT
Trigger: AGTCCTACATTTTAGCTTTCAGTGCTGAACTTCCTT...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCATCATCCCCCAATTCATaGAGATACATGCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPSSPNS*RYMQSG
Trigger: ACCTGACTGCATGTATCTTCATGAATTGGGGGATGA...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACACCGTTCCCTATACTaGGAGAATCTGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPHRSLY*ENLKVC
Trigger: ACAAACCTTCAGATTCTCTCAGTATAGGGAACGGTG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACTAAGGCTTTTCGAGTaGCATCGAAGGGATCAAAAC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLRLFE*HRRDQN
Trigger: GTTTTGATCCCTTCGATGTCACTCGAAAAGCCTTAG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGCCTGGAAAACTGAATaGATTATAAACCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPAWKTE*IINRSV
Trigger: CACCGAGCGGTTTATAATTCATTCAGTTTTCCAGGC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACCTGGCCTGGAAAACTaGATGAATTATAAACCGCTC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPPGLEN*MNYKPL
Trigger: GAGCGGTTTATAATTCATTCAGTTTTCCAGGCCAGG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCTGTGGTTCAAGTGCATaGTGCTATTGCGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIICGSSA*CYCVER
Trigger: CCTTTCCACGCAATAGCATCATGCACTTGAACCACA...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGACAGAGGAGAAGGACTaGAGAAATGACTTACATTTC +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLTEEKD*RNDLHF
Trigger: GAAATGTAAGTCATTTCTTCAGTCCTTCTCCTCTGT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGAGTGCCCTCGTCAGGTaGATTTATGGTAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLSALVR*IYGKTK
Trigger: TTTTGTTTTACCATAAATTCACCTGACGAGGGCACT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCACGCTGGCTATGAATaGGAAAGGAAAGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFHAGYE*ERKEAS
Trigger: TGAGGCTTCTTTCCTTTCTCATTCATAGCCAGCGTG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCATTGGCATTTGTAGCTaGAGCAGGATGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFIGICS*SRMQES
Trigger: GGATTCCTGCATCCTGCTGCAGCTACAAATGCCAAT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGACACAATCAAGTCCTTaGCATCAACTTGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLTQSSP*HQLAKR
Trigger: TCTTTTGGCAAGTTGATGGCAAGGACTTGATTGTGT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGCCCTTAGCCCGTCCTaGCATTCCTTCATATTTAAA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPALSPS*HSFIFK
Trigger: TTTAAATATGAAGGAATGGCAGGACGGGCTAAGGGC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAACTGCTGGGTCTTCTaGATATGGCTTTCTACATGC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPNCWVF*IWLSTC
Trigger: GCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCTCTTCCTGGGAGAGTaGTTTATAAACTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFLFLGE*FINCWV
Trigger: GACCCAGCAGTTTATAAACCACTCTCCCAGGAAGAG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACTTCTGTTCATATTCTTaGTGTTTACCCGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: SSTGDISEVLASYSKNENFCSYS*CLPACI
Trigger: AATGCAGGCGGGTAAACACCAAGAATATGAACAGAA...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCATCGTACCTCTGCAGTaGTGTCACTTTGTTCTTATT +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSIVPLQ*CHFVLI
Trigger: AATAAGAACAAAGTGACACCACTGCAGAGGTACGAT...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315544.6
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGATCGTACCTCTGCAGTaGTGTCACTTTGTTCTTATT +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLIVPLQ*CHFVLI
Trigger: AATAAGAACAAAGTGACACCACTGCAGAGGTACGAT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR CCA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCAATTACTATTTGAGGTaGGGTTTGCTGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSNYYLR*GLLCGS
Trigger: TGAACCACACAGCAAACCCCACCTCAAATAGTAATT...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGAATTACTATTTGAGGTaGGGTTTGCTGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLNYYLR*GLLCGS
Trigger: TGAACCACACAGCAAACCCCACCTCAAATAGTAATT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAGGTTGACAGTGGCATaGTCGAAACCTTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIRLTVA*SKPSPL
Trigger: AAGAGGTGAAGGTTTCGACCATGCCACTGTCAACCT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCACATGTAGGCAGAATATaGTCATGTTTTCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPHVGRI*SCFLNQ
Trigger: CTGATTCAGAAAACATGACCATATTCTGCCTACATG...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCTCATCCCCCAATTCATaGAGATACATGCAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIISSPNS*RYMQSG
Trigger: ACCTGACTGCATGTATCTTCATGAATTGGGGGATGA...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCACCGTTCCCTATACTaGGAGAATCTGAAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFHRSLY*ENLKVC
Trigger: ACAAACCTTCAGATTCTCTCAGTATAGGGAACGGTG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCTAAGGCTTTTCGAGTaGCATCGAAGGGATCAAAAC +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFLRLFE*HRRDQN
Trigger: GTTTTGATCCCTTCGATGTCACTCGAAAAGCCTTAG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTTATGGTCATGTTTTCTaGATCAGCTTTTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSYGHVF*ISFCPL
Trigger: CAGTGGACAAAAGCTGATTCAGAAAACATGACCATA...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATATCAGTGCGAATTCGATaGCAACAAAATCGGCAAATC +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFISVRIR*QQNRQI
Trigger: GATTTGCCGATTTTGTTGGCATCGAATTCGCACTGA...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAAGCCAAAAGCTGCTTaGCAGTCTGTAGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIKPKAA*QSVEDD
Trigger: ATCATCCTCTACAGACTGGCAAGCAGCTTTTGGCTT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCTGTCTTTTCAATACTaGACAAACGTCCAGAAACTA +
Preference number: 4 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLLSFQY*TNVQKL
Trigger: TAGTTTCTGGACGTTTGTGCAGTATTGAAAAGACAG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCGGGATAGGGTTGGGATaGCGAAAATTGTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIGIGLG*RKLSEN
Trigger: ATTCTCAGACAATTTTCGCCATCCCAACCCTATCCC...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCATGATGCTATTGCGTaGAAAGGCCATCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFHDAIA*KGHPRI
Trigger: TATCCTTGGATGGCCTTTCCACGCAATAGCATCATG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATCTGTTACAATTTAGGTaGCCTAATTTTAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: RFAILFRALANLGKLPDDLLQFR*PNFRGH
Trigger: ATGTCCTCTAAAATTAGGCCACCTAAATTGTAACAG...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCTATACTGAGAGAATCTaGAGGTTTGTCAATGGGGGT +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFYTERI*RFVNGG
Trigger: ACCCCCATTGACAAACCTTCAGATTCTCTCAGTATA...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315544.6
CDS-3UTR TCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCCAACAATATCCTTCTaGGCATTAAATGACACCACC +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFPTISF*ALNDTT
Trigger: GGTGGTGTCATTTAATGCTCAGAAGGATATTGTTGG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAACAGAGGAGAAGGACTaGAGAAATGACTTACATTTC +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPTEEKD*RNDLHF
Trigger: GAAATGTAAGTCATTTCTTCAGTCCTTCTCCTCTGT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAGTGCCCTCGTCAGGTaGATTTATGGTAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPSALVR*IYGKTK
Trigger: TTTTGTTTTACCATAAATTCACCTGACGAGGGCACT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCGCCCATTTTCATCAGTaGGAATTCGATGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIAHFHQ*EFDANK
Trigger: TTTGTTGGCATCGAATTCGCACTGATGAAAATGGGC...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCGCCCATTTTCATCAGTaGGAATTCGATGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFAHFHQ*EFDANK
Trigger: TTTGTTGGCATCGAATTCGCACTGATGAAAATGGGC...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCATGGTTTATAAACTGCTaGGTCTTCTGGATATGGCTT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPWFINC*VFWIWL
Trigger: AAGCCATATCCAGAAGACCCAGCAGTTTATAAACCA...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATATGGTTTATAAACTGCTaGGTCTTCTGGATATGGCTT +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIWFINC*VFWIWL
Trigger: AAGCCATATCCAGAAGACCCAGCAGTTTATAAACCA...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCCTGTTAGATATCTGCTaGGAATTATCACCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIILLDIC*ELSPFP
Trigger: AGGGAACGGTGATAATTCCCAGCAGATATCTAACAG...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAACCCAAGTCATCCTCTaGTTGTTTAGAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPTQVIL*LFRRTK
Trigger: TTTGGTTCTTCTAAACAACCAGAGGATGACTTGGGT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAATTACTATTTGAGGTaGGGTTTGCTGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPNYYLR*GLLCGS
Trigger: TGAACCACACAGCAAACCCCACCTCAAATAGTAATT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR TCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAAGGAAGTTCAGCACTaGAAGCTAAAATGTAGGACT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIKEVQH*KLKCRT
Trigger: AGTCCTACATTTTAGCTTTCAGTGCTGAACTTCCTT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR TCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCATACTTCAACAACTATaGGGTAACACGCTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIILQQL*GNTLAV
Trigger: TACAGCTAGCGTGTTACCTCATAGTTGTTGAAGTAT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATAATTCATGAAGATACATaGAGTCAGGTTTTGGACACT +
Preference number: 4 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIIHEDT*SQVLDT
Trigger: AGTGTCCAAAACCTGACTGCATGTATCTTCATGAAT...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR GCA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAATTCATGAAGATACATaGAGTCAGGTTTTGGACACT +
Preference number: 4 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPIHEDT*SQVLDT
Trigger: AGTGTCCAAAACCTGACTGCATGTATCTTCATGAAT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR GCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCATGGCACTAACCACTTaGTATGGCTTTGTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIMALTT*YGFVRR
Trigger: TCTTCTTACAAAGCCATAGCAAGTGGTTAGTGCCAT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCTTCTGTTCATATTCTTaGTGTTTACCCGCCTGCATT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIFCSYS*CLPACI
Trigger: AATGCAGGCGGGTAAACACCAAGAATATGAACAGAA...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCACCCAAGTCATCCTCTaGTTGTTTAGAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFTQVIL*LFRRTK
Trigger: TTTGGTTCTTCTAAACAACCAGAGGATGACTTGGGT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAATTACTATTTGAGGTaGGGTTTGCTGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIINYYLR*GLLCGS
Trigger: TGAACCACACAGCAAACCCCACCTCAAATAGTAATT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCGAGGAACGTTTATATTaGCTCTTCTGGGTGTATACA +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFEERLY*LFWVYT
Trigger: TGTATACACCCAGAAGAGCCAATATAAACGTTCCTC...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCCTAGCTAATCTCACCTaGGATCTTAGTACTACAAGT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIILANLT*DLSTTS
Trigger: ACTTGTAGTACTAAGATCCCAGGTGAGATTAGCTAG...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCATTCATGAAGATACATaGAGTCAGGTTTTGGACACT +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFIHEDT*SQVLDT
Trigger: AGTGTCCAAAACCTGACTGCATGTATCTTCATGAAT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR GCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCATCATAAAGGAATCATaGAAAAATCCAGTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFIIKES*KNPVAH
Trigger: ATGGGCAACTGGATTTTTGCATGATTCCTTTATGAT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCGCCTTAGTCTCATTCTaGTCAGGTACTTATAATATT +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFALVSF*SGTYNI
Trigger: AATATTATAAGTACCTGACCAGAATGAGACTAAGGC...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCGCCTTAGTCTCATTCTaGTCAGGTACTTATAATATT +
Preference number: 4 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIALVSF*SGTYNI
Trigger: AATATTATAAGTACCTGACCAGAATGAGACTAAGGC...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
34% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CCA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCTGTTACAATTTAGGTaGCCTAATTTTAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFLLQFR*PNFRGH
Trigger: ATGTCCTCTAAAATTAGGCCACCTAAATTGTAACAG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS TCA 90 bp GTGCAGCGGGATCTGTGTGCTGAAGGGGGCGCTGTGGTGGGTCTGTaGTGGAGCAGCGCTGGGGCCGTCCATCTCTGTGAGGGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: VQRDLCAEGGAVVGL*WSSAGAVHLCEGLK
Trigger: CTTCAGGCCCTCACAGAGATGGACGGCCCCAGCGCTGCTCCATCACAGACCCACCACAGCGCCCCCTTCAGCACACAGATCCCGCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361528.8
ENST00000423368.6
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 90 bp CTGGCTCTGTGCAGCGGGATCTGTGTGCTGAAGGGGGCGCTGTGGTaGGTCTGTGATGGAGCAGCGCTGGGGCCGTCCATCTCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: LALCSGICVLKGALW*VCDGAALGPSISVR
Trigger: CCTCACAGAGATGGACGGCCCCAGCGCTGCTCCATCACAGACCCACCACAGCGCCCCCTTCAGCACACAGATCCCGCTGCACAGAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361528.8
ENST00000423368.6
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS TCA 90 bp GAGGGTAGGGATTCCAACTGGCTCTGTGCAGCGGGATCTGTGTGCTaGAGGGGGCGCTGTGGTGGGTCTGTGATGGAGCAGCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EGRDSNWLCAAGSVC*RGRCGGSVMEQRWG
Trigger: GCCCCAGCGCTGCTCCATCACAGACCCACCACAGCGCCCCCTTCAGCACACAGATCCCGCTGCACAGAGCCAGTTGGAATCCCTACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361528.8
ENST00000423368.6
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 90 bp CAACTGGCTCTGTGCAGCGGGATCTGTGTGCTGAAGGGGGCGCTGTaGTGGGTCTGTGATGGAGCAGCGCTGGGGCCGTCCATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: QLALCSGICVLKGAL*WVCDGAALGPSISV
Trigger: CACAGAGATGGACGGCCCCAGCGCTGCTCCATCACAGACCCACCACAGCGCCCCCTTCAGCACACAGATCCCGCTGCACAGAGCCAGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361528.8
ENST00000423368.6
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 90 bp GGTCTGTCCAGCTGCCAGGGCTGTCCCAACTCAGGCTGTCGGTGGTaGCAGTGTTGGACGTTGGTGCACTGTGGTTGGCGTTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GLSSCQGCPNSGCRW*QCWTLVHCGWRWRG
Trigger: CCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCCCTGGCAGCTGGACAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS GCA 90 bp ACCCGCCTGCCTTGCCTCGCTTTTCCCTCAGCCGACTCCACGGGCTaGCGCGTCCTCACAAGAAACCACCGAACGAGCGTCGGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: TRLPCLAFPSADSTG*RVLTRNHRTSVGEK
Trigger: TTTTTCCCCGACGCTCGTTCGGTGGTTTCTTGTGAGGACGCGGCAGCCCGTGGAGTCGGCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CCA 90 bp CTGGGTCTGTCCAGCTGCCAGGGCTGTCCCAACTCAGGCTGTCGGTaGTGGCAGTGTTGGACGTTGGTGCACTGTGGTTGGCGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LGLSSCQGCPNSGCR*WQCWTLVHCGWRWR
Trigger: CCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCCCTGGCAGCTGGACAGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS GCA 90 bp GCTGTCCCAACTCAGGCTGTCGGTGGTGGCAGTGTTGGACGTTGGTaGACTGTGGTTGGCGTTGGAGGGGGAAGAAGAATTGGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: AVPTQAVGGGSVGRW*TVVGVGGGRRIGQS
Trigger: GGACTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 90 bp GAGGCTCTGTGGTTCTGGTGCTGTAGGCCAGTCACTGGATGTCTGTaGGGAGCTGGGGAAAGGAGGAAGCCCACTTGGGATAGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: EALWFWCCRPVTGCL*GAGERRKPTWDRVG
Trigger: CCCAACCCTATCCCAAGTGGGCTTCCTCCTTTCCCCAGCTCCCCACAGACATCCAGTGACTGGCCTACAGCACCAGAACCACAGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CCA 90 bp AGGGCTGTCCCAACTCAGGCTGTCGGTGGTGGCAGTGTTGGACGTTaGTGCACTGTGGTTGGCGTTGGAGGGGGAAGAAGAATTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RAVPTQAVGGGSVGR*CTVVGVGGGRRIGQ
Trigger: CTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 90 bp AGCTGCCAGGGCTGTCCCAACTCAGGCTGTCGGTGGTGGCAGTGTTaGACGTTGGTGCACTGTGGTTGGCGTTGGAGGGGGAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SCQGCPNSGCRWWQC*TLVHCGWRWRGKKN
Trigger: ATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCCCTGGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS GCA 90 bp GCCGCCTCGGCTCCCCAATTAAAGAAATTCTCGAAGGAGAGTCGCTaGTTGCCGCCGCGCTGCCTTCTGACCCGCTCCCTTTTCCTTATG +
Preference number: 5 (lower is better)
Translates to: AASAPQLKKFSKESR*LPPRCLLTRSLFLM
Trigger: CATAAGGAAAAGGGAGCGGGTCAGAAGGCAGCGCGGCGGCAAGCAGCGACTCTCCTTCGAGAATTTCTTTAATTGGGGAGCCGAGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465721.1
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTC +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQPPRPV*CCGGRF
Trigger: GAATCTCCCGCCACAGCACAACACAGGTCTGGGAGG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp TTCAGAACCGGGCCTGATTGCTTCAGCGAGTCCGACCTTTACGGCTaGGAGAGAGACTCTCAGCTTTCGGTGGGTTCCACAGCCAGACGG +
Preference number: 5 (lower is better)
Translates to: FRTGPDCFSESDLYG*ERDSQLSVGSTARR
Trigger: CCGTCTGGCTGTGGAACCCACCGAAAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGTCGGACTCGCTGAAGCAATCAGGCCCGGTTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CCA 90 bp CAACTCAGGCTGTCGGTGGTGGCAGTGTTGGACGTTGGTGCACTGTaGTTGGCGTTGGAGGGGGAAGAAGAATTGGGCAGTCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: QLRLSVVAVLDVGAL*LALEGEEELGSPPK
Trigger: CTTTGGTGGACTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTCGGTGGTGGCAGTGTaGGACGTTGGTGCACTGTGG +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSASVVAV*DVGALW
Trigger: CCACAGTGCACCAACGTCCAACACTGCCACCACCGA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCATAAGCACTGGCACTaGGACCCTGTGAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQHKHWH*DPVSLH
Trigger: ATGCAGGCTCACAGGGTCCAAGTGCCAGTGCTTATG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGGGGCGAAAGGGAAGGTaGGTCTTGAACGGACAGTTC +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQGRKGR*VLNGQF
Trigger: GAACTGTCCGTTCAAGACCAACCTTCCCTTTCGCCC...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCCAGAGCCTGGACCTTaGGCGGTTGTAGTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQPEPGP*AVVVCE
Trigger: TTCACACACTACAACCGCCAAAGGTCCAGGCTCTGG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGTTGGTGCACTGTGGTaGGCGTTGGAGGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAVGALW*ALEGEE
Trigger: TTCTTCCCCCTCCAACGCCAACCACAGTGCACCAAC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTGGCAGTGTTGGACGTaGGTGCACTGTGGTTGGCGT +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAWQCWT*VHCGWR
Trigger: ACGCCAACCACAGTGCACCAACGTCCAACACTGCCA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS CCA 90 bp GCGAGTCCGACCTTTACGGCTGAGAGAGAGACTCTCAGCTTTCGGTaGGTTCCACAGCCAGACGGGCCACCATCTTACATTAGGGTAAGA +
Preference number: 5 (lower is better)
Translates to: ASPTFTAERETLSFR*VPQPDGPPSYIRVR
Trigger: TCTTACCCTAATGTAAGATGGTGGCCCGTCTGGCTGTGGAACCCACCGAAAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGTCGGACTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000541284.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGACGACCCGCCTGCCTaGCCTCGCTTTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGDDPPA*PRFSLS
Trigger: GCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGTC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCATAAGCACTGGCACTaGGACCCTGTGAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAHKHWH*DPVSLH
Trigger: ATGCAGGCTCACAGGGTCCAAGTGCCAGTGCTTATG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCCAGAGCCTGGACCTTaGGCGGTTGTAGTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAPEPGP*AVVVCE
Trigger: TTCACACACTACAACCGCCAAAGGTCCAGGCTCTGG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAATGGTTGCTCCTCTTaGCCTAATGGCGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQNGCSS*PNGGPV
Trigger: CACTGGACCGCCATTAGGCAAAGAGGAGCAACCATT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGACCCTGTGATCGCATaGCATCTGGGGTTAGGGAGA +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSADPVIA*HLGLGR
Trigger: TCTCCCTAACCCCAGATGCAATGCGATCACAGGGTC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 90 bp CAATTAAAGAAATTCTCGAAGGAGAGTCGCTGCTTGCCGCCGCGCTaGCTTCTGACCCGCTCCCTTTTCCTTATGGTAACTGCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: QLKKFSKESRCLPPR*LLTRSLFLMVTAVA
Trigger: CGCCACAGCAGTTACCATAAGGAAAAGGGAGCGGGTCAGAAGGCAGCGCGGCGGCAAGCAGCGACTCTCCTTCGAGAATTTCTTTAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465721.1
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGACGACCCGCCTGCCTaGCCTCGCTTTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQDDPPA*PRFSLS
Trigger: GCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGTC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTCTACAGAACTGCTGTaGTCTGCTACAGGGATCCCT +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQSTELL*SATGIP
Trigger: AGGGATCCCTGTAGCAGACAACAGCAGTTCTGTAGA...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGAGGGGGAAGAAGAATaGGGCAGTCCACCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAEGEEE*GSPPKL
Trigger: CAACTTTGGTGGACTGCCCAATTCTTCTTCCCCCTC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp AGGATGCAGGAATCCAGAGCCTGGACCTTTGGCGGTTGTAGTGTGTaGAGAGGAGTTCTGAAGAGATGTGGGCGAAAGGGAAGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: RMQESRAWTFGGCSV*RGVLKRCGRKGRLV
Trigger: GACCAACCTTCCCTTTCGCCCACATCTCTTCAGAACTCCTCTTCACACACTACAACCGCCAAAGGTCCAGGCTCTGGATTCCTGCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCCATAAGCACTGGCACTaGGACCCTGTGAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: LYHMLVSGAYLFPPPNDIHKHWH*DPVSLH
Trigger: ATGCAGGCTCACAGGGTCCAAGTGCCAGTGCTTATG...GATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTCCACTTGGGATAGGGTaGGGATGGCGAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAPLGIG*GWRKLS
Trigger: AGACAATTTTCGCCATCCCAACCCTATCCCAAGTGG...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGCCACCGCGCCTGGCCACCCACCTCTCTTAAGCTATACCACATGCTCGTCTCACAAGTCATCCTCTGGTaGTTTAGAAGAACCAAAGCC +
Preference number: 5 (lower is better)
Translates to: SHRAWPPTSLKLYHMLVSQVILW*FRRTKA
Trigger: GGCTTTGGTTCTTCTAAACAACCAGAGGATGACTTG...TGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGGGTGGCCAGGCGCGGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAAGGGAAGGTTGGTCTaGAACGGACAGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAKGRLV*NGQFLL
Trigger: GAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCTT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGAAGTGCATGATGCTATaGCGTGGAAAGGCCATCCAA +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQKCMML*RGKAIQ
Trigger: TTGGATGGCCTTTCCACGCAATAGCATCATGCACTT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp GTGGAAAGGCCATCCAAGGATAGCGGGCTGCCTGGCCTGGAAAACTaGATGAATTATAAACCGCTCGGTGCTGCTGAAATTGAGGGAACC +
Preference number: 5 (lower is better)
Translates to: VERPSKDSGLPGLEN*MNYKPLGAAEIEGT
Trigger: GGTTCCCTCAATTTCAGCAGCACCGAGCGGTTTATAATTCATTCAGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGGATGGCCTTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCCATCTACTACCACATaGTTGACACACTGTATGGCT +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQPSTTT*LTHCMA
Trigger: AGCCATACAGTGTGTCAACAATGTGGTAGTAGATGG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGCAAGTCATCCTCTGGTaGTTTAGAAGAACCAAAGCC +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQQVILW*FRRTKA
Trigger: GGCTTTGGTTCTTCTAAACAACCAGAGGATGACTTG...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGTTGGTGCACTGTGGTaGGCGTTGGAGGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGVGALW*ALEGEE
Trigger: TTCTTCCCCCTCCAACGCCAACCACAGTGCACCAAC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATCGGTGGTGGCAGTGTaGGACGTTGGTGCACTGTGG +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQSVVAV*DVGALW
Trigger: CCACAGTGCACCAACGTCCAACACTGCCACCACCGA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp AAAGGCCATCCAAGGATAGCGGGCTGCCTGGCCTGGAAAACTGAATaGATTATAAACCGCTCGGTGCTGCTGAAATTGAGGGAACCTCTG +
Preference number: 5 (lower is better)
Translates to: KGHPRIAGCLAWKTE*IINRSVLLKLREPL
Trigger: CAGAGGTTCCCTCAATTTCAGCAGCACCGAGCGGTTTATAATTCATTCAGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGGATGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 90 bp ACCTCTTCTTCCCCTGCTACAGGGATCCCTCCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAGTCCAAGAAATTACTATTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: TSSSPATGIPPRPVL*CGGRFKSKKLLFEV
Trigger: CACCTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGGGGAAGAAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS GCA 90 bp GACGCTGGAATACCTGCTACAGGGATCCCTCCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAGTCCAAGAAATTACTATTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: DAGIPATGIPPRPVL*CGGRFKSKKLLFEV
Trigger: CACCTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGGTATTCCAGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361528.8
ENST00000423368.6
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCATAAGCACTGGCACTaGGACCCTGTGAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGHKHWH*DPVSLH
Trigger: ATGCAGGCTCACAGGGTCCAAGTGCCAGTGCTTATG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAATGGCGGTCCAGTGTaGAACTCTGTAGTAAATCTG +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSANGGPV*NSVVNL
Trigger: CAGATTTACTACAGAGTTCAACACTGGACCGCCATT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGCACTGTGGTTGGCGTaGGAGGGGGAAGAAGAATTG +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGALWLA*EGEEEL
Trigger: CAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATGGCAGTGTTGGACGTaGGTGCACTGTGGTTGGCGT +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQWQCWT*VHCGWR
Trigger: ACGCCAACCACAGTGCACCAACGTCCAACACTGCCA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp AACCGCTCGGTGCTGCTGAAATTGAGGGAACCTCTGGGGCAAGACTaGAAAGGTACTATTGAGAGAATTGGCATTTGTAGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: NRSVLLKLREPLGQD*KGTIERIGICSCSR
Trigger: CCTGCTGCAGCTACAAATGCCAATTCTCTCAATAGTACCTTTTCAGTCTTGCCCCAGAGGTTCCCTCAATTTCAGCAGCACCGAGCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 90 bp GAACTGCTGTTGTCTGCTACAGGGATCCCTCCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAGTCCAAGAAATTACTATTTGAGGTG +
Preference number: 5 (lower is better)
Translates to: ELLLSATGIPPRPVL*CGGRFKSKKLLFEV
Trigger: CACCTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGACAACAGCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCTAAAATGTAGGACTTaGACGACCCGCCTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGLKCRT*TTRLPC
Trigger: GCAAGGCAGGCGGGTCGTCAAAGTCCTACATTTTAG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGGCAAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGACATGCAGTCAGGTTTaGGACACTGCATATTCTTTA +
Preference number: 5 (lower is better)
Translates to: RQGGQRFAPDGDQMAPEQTCSQV*DTAYSL
Trigger: TAAAGAATATGCAGTGTCCAAAACCTGACTGCATGT...CTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTTTGGGATGGCGAAAATaGTCTGAGAATAACGACTGT +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSALGWRK*SENNDC
Trigger: ACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAA...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCCACTTGGGATAGGGTaGGGATGGCGAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: PPLLSYTTCSSQELISSHPLGIG*GWRKLS
Trigger: AGACAATTTTCGCCATCCCAACCCTATCCCAAGTGG...GTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTGTACTATTGAGAGAATaGGCATTTGTAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAVLLRE*AFVAAA
Trigger: TGCTGCAGCTACAAATGCCAATTCTCTCAATAGTAC...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTAATGGTTGCTCCTCTTaGCCTAATGGCGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGNGCSS*PNGGPV
Trigger: CACTGGACCGCCATTAGGCAAAGAGGAGCAACCATT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAAGTTGATGTTAATGTaGGGTAGAAGTGCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSAKLMLM*GRSALS
Trigger: GCTAAGGGCACTTCTACCCAACATTAACATCAACTT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp AGAAATTACTATTTGAGGTGGGGTTTGCTGTGTGGTTCAAGTGCATaGTGCTATTGCGTGGAAAGGCCATCCAAGGATAGCGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: RNYYLRWGLLCGSSA*CYCVERPSKDSGLP
Trigger: AGGCAGCCCGCTATCCTTGGATGGCCTTTCCACGCAATAGCATCATGCACTTGAACCACACAGCAAACCCCACCTCAAATAGTAATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 90 bp TCTCAGTTCTGTTGTCAGGCCACAGTAGTGTGGAGACTTGTAGGCTaGTGTCCTTGTTGTAATGAATGGGAAGAGGTTGACAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: SQFCCQATVVWRLVG*CPCCNEWEEVDSGM
Trigger: CATGCCACTGTCAACCTCTTCCCATTCATTACAACAAGGACAGCAGCCTACAAGTCTCCACACTACTGTGGCCTGACAACAGAACTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATAGACGACCCGCCTGCCTaGCCTCGCTTTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIDDPPA*PRFSLS
Trigger: GCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGTC...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGACGACCCGCCTGCCTaGCCTCGCTTTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPDDPPA*PRFSLS
Trigger: GCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGTC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACTAAAATGTAGGACTTaGACGACCCGCCTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQLKCRT*TTRLPC
Trigger: GCAAGGCAGGCGGGTCGTCAAAGTCCTACATTTTAG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTAGTAACTGCAGTATTTaGTTGTACCTAGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSASNCSI*LYLEMP
Trigger: AGGCATCTCTAGGTACAACAAAATACTGCAGTTACT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AAGGAGGTCAGAGATTTGCTCCCGATGGTGATCAGATGGCCCCAGAGCAGTGCTACATGCAGTCAGGTTTaGGACACTGCATATTCTTTA +
Preference number: 5 (lower is better)
Translates to: KEVRDLLPMVIRWPQSSATCSQV*DTAYSL
Trigger: TAAAGAATATGCAGTGTCCAAAACCTGACTGCATGT...AGCACTGCTCTGGGGCCATCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp GCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATAGAGAATCTGAAGGTTaGTCAATGGGGGTATCGTAC +
Preference number: 5 (lower is better)
Translates to: AIPHARLRSLSLPTTQRHRESEG*SMGVSY
Trigger: GTACGATACCCCCATTGACAAACCTTCAGATTCTCT...ATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp GCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATATGGGGATGACTGGATaGGATTTTGACAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: AIPHARLRSLSLPTTQRHMGMTG*DFDKPG
Trigger: ACCTGGTTTGTCAAAATCCAATCCAGTCATCCCCAT...ATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCCACTTGGGATAGGGTaGGGATGGCGAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGPLGIG*GWRKLS
Trigger: AGACAATTTTCGCCATCCCAACCCTATCCCAAGTGG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTC +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSPPRPV*CCGGRF
Trigger: GAATCTCCCGCCACAGCACAACACAGGTCTGGGAGG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTC +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLPPRPV*CCGGRF
Trigger: GAATCTCCCGCCACAGCACAACACAGGTCTGGGAGG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTAAGGAGGTCAGAGATTaGCTCCCGATGGTGATCAGA +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGKEVRD*LPMVIR
Trigger: TCTGATCACCATCGGGAGCAAATCTCTGACCTCCTT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp AGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATCCTACTaGATGAGCCTATCTTCTCTTCAGCACTGCCAGTCTCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: RSLSLPTTQRHLLSY*MSLSSLQHCQSLPL
Trigger: GAGAGGAAGAGACTGGCAGTGCTGAAGAGAAGATAGGCTCATTCAGTAGGATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCGACGACCCGCCTGCCTaGCCTCGCTTTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIDDPPA*PRFSLS
Trigger: GCTGAGGGAAAAGCGAGGCAAGGCAGGCGGGTCGTC...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCCATCTACTACCACATaGTTGACACACTGTATGGCT +
Preference number: 5 (lower is better)
Translates to: PPLLSYTTCSSQELISSHPSTTT*LTHCMA
Trigger: AGCCATACAGTGTGTCAACAATGTGGTAGTAGATGG...GTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACCACTTGGGATAGGGTaGGGATGGCGAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQPLGIG*GWRKLS
Trigger: AGACAATTTTCGCCATCCCAACCCTATCCCAAGTGG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAAAGGGAAGGTTGGTCTaGAACGGACAGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQKGRLV*NGQFLL
Trigger: GAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCTT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATGGGCGAAAGGGAAGGTaGGTCTTGAACGGACAGTTC +
Preference number: 5 (lower is better)
Translates to: RFAILFRALANLGKLPDDGRKGR*VLNGQF
Trigger: GAACTGTCCGTTCAAGACCAACCTTCCCTTTCGCCC...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTAAGTGCATGATGCTATaGCGTGGAAAGGCCATCCAA +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGKCMML*RGKAIQ
Trigger: TTGGATGGCCTTTCCACGCAATAGCATCATGCACTT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp AACAAAATCGGCAAATCTGGTAGCCACAGGTGCAAGGGAAAAAGTTaGTATCATCTATCTCCAAGGGCTCCATGCAAAGAGGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: NKIGKSGSHRCKGKS*YHLSPRAPCKEGTP
Trigger: TGGAGTGCCCTCTTTGCATGGAGCCCTTGGAGATAGATGATATCAACTTTTTCCCTTGCACCTGTGGCTACCAGATTTGCCGATTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000465721.1
ENST00000491203.5
ENST00000498534.5
ENST00000541284.5
CDS TCA 90 bp TGTGTTGTGCTGTGGCGGGAGATTCAAGTCCAAGAAATTACTATTTaGGGTGGGGTTTGCTGTGTGGTTCAAGTGCATGATGCTATTGCG +
Preference number: 5 (lower is better)
Translates to: CVVLWREIQVQEITI*GGVCCVVQVHDAIA
Trigger: CGCAATAGCATCATGCACTTGAACCACACAGCAAACCCCACCTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCATAAGCACTGGCACTaGGACCCTGTGAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSHKHWH*DPVSLH
Trigger: ATGCAGGCTCACAGGGTCCAAGTGCCAGTGCTTATG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCCATCTACTACCACATaGTTGACACACTGTATGGCT +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGPSTTT*LTHCMA
Trigger: AGCCATACAGTGTGTCAACAATGTGGTAGTAGATGG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCACCTCTCTTAAGCTATACCACATGCTCGTCTCAGGAGCTTATCTCTTCCCACTTGGGATGGCGAAAATaGTCTGAGAATAACGACTGT +
Preference number: 5 (lower is better)
Translates to: PPLLSYTTCSSQELISSHLGWRK*SENNDC
Trigger: ACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAA...GTGGGAAGAGATAAGCTCCTGAGACGAGCATGTGGTATAGCTTAAGAGAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATACCACTTGGGATAGGGTaGGGATGGCGAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIPLGIG*GWRKLS
Trigger: AGACAATTTTCGCCATCCCAACCCTATCCCAAGTGG...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTCAAGTCATCCTCTGGTaGTTTAGAAGAACCAAAGCC +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGQVILW*FRRTKA
Trigger: GGCTTTGGTTCTTCTAAACAACCAGAGGATGACTTG...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGGGCGAAAGGGAAGGTaGGTCTTGAACGGACAGTTC +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLGRKGR*VLNGQF
Trigger: GAACTGTCCGTTCAAGACCAACCTTCCCTTTCGCCC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCCAGAGCCTGGACCTTaGGCGGTTGTAGTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSPEPGP*AVVVCE
Trigger: TTCACACACTACAACCGCCAAAGGTCCAGGCTCTGG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATATTTGAGGTGGGGTTaGCTGTGTGGTTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQYLRWG*LCGSSA
Trigger: TGCACTTGAACCACACAGCAAACCCCACCTCAAATA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTC +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPPPRPV*CCGGRF
Trigger: GAATCTCCCGCCACAGCACAACACAGGTCTGGGAGG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATACCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTC +
Preference number: 5 (lower is better)
Translates to: SGLQVKNSYVKGKASHFIPPRPV*CCGGRF
Trigger: GAATCTCCCGCCACAGCACAACACAGGTCTGGGAGG...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCACATGCAAAAATCCAGTaGCCCATGCAAGCACCCCAG +
Preference number: 5 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPHAKIQ*PMQAPQ
Trigger: CTGGGGTGCTTGCATGGGCAACTGGATTTTTGCATG...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAAGAGAATCTGAAGGTTaGTCAATGGGGCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQRESEG*SMGLCS
Trigger: ACTGCAGAGCCCCATTGACAAACCTTCAGATTCTCT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451834.5
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGACCCTGTGATCGCATaGCATCTGGGGTTAGGGAGA +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLDPVIA*HLGLGR
Trigger: TCTCCCTAACCCCAGATGCAATGCGATCACAGGGTC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTGACACAATCAAGTCCTaGCCATCAACTTGCCAAAAG +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGDTIKS*PSTCQK
Trigger: CTTTTGGCAAGTTGATGGCAAGGACTTGATTGTGTC...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS TCA 90 bp GCTTATCTCTTCCCACCACCCAACGACATCTATTATCCTACTGAATaGGCCTATCTTCTCTTCAGCACTGCCAGTCTCTTCCTCTCAATT +
Preference number: 5 (lower is better)
Translates to: AYLFPPPNDIYYPTE*AYLLFSTASLFLSI
Trigger: AATTGAGAGGAAGAGACTGGCAGTGCTGAAGAGAAGATAGGCTCATTCAGTAGGATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS GCA 90 bp AGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTTaGTCCTCTTTGCCTAATGGCGGTCCAGTGTTGAACTCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: RGRKQSGTNPAFSNG*SSLPNGGPVLNSVV
Trigger: TACTACAGAGTTCAACACTGGACCGCCATTAGGCAAAGAGGAGCAACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCTAAAATGTAGGACTTaGACGACCCGCCTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSLKCRT*TTRLPC
Trigger: GCAAGGCAGGCGGGTCGTCAAAGTCCTACATTTTAG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp ATGGGAGAAGGGGATCACCAAATCCTTCACAAATCTAATAACTATGGATCTTCTCATAAGCACTGGCACTaGGACCCTGTGAGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: MGEGDHQILHKSNNYGSSHKHWH*DPVSLH
Trigger: ATGCAGGCTCACAGGGTCCAAGTGCCAGTGCTTATG...AGAAGATCCATAGTTATTAGATTTGTGAAGGATTTGGTGATCCCCTTCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp CAGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATCCTACTGAATGAGCTTCTGTTCATATTCTaGGTGTTTACCCGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: QELISSHHPTTSIILLNELLFIF*VFTRLH
Trigger: ATGCAGGCGGGTAAACACCAAGAATATGAACAGAAG...CTCATTCAGTAGGATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAACTTCTGTTCATATTCTaGGTGTTTACCCGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQLLFIF*VFTRLH
Trigger: ATGCAGGCGGGTAAACACCAAGAATATGAACAGAAG...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAAGAGAATCTGAAGGTTaGTCAATGGGGGTATCGTAC +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQRESEG*SMGVSY
Trigger: GTACGATACCCCCATTGACAAACCTTCAGATTCTCT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAATGGGGATGACTGGATaGGATTTTGACAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQMGMTG*DFDKPG
Trigger: ACCTGGTTTGTCAAAATCCAATCCAGTCATCCCCAT...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACCTCCTCTCAGTTCTGTaGTCAGGCCACAGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: SSTGDISEVLASYSKNENLLSVL*SGHSSV
Trigger: CACACTACTGTGGCCTGACAACAGAACTGAGAGGAG...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGAATGGTTGCTCCTCTTaGCCTAATGGCGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLNGCSS*PNGGPV
Trigger: CACTGGACCGCCATTAGGCAAAGAGGAGCAACCATT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAAGACACAATCAAGTCCTaGCCATCAACTTGCCAAAAG +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQDTIKS*PSTCQK
Trigger: CTTTTGGCAAGTTGATGGCAAGGACTTGATTGTGTC...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTAAGTTGATGTTAATGTaGGGTAGAAGTGCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGKLMLM*GRSALS
Trigger: GCTAAGGGCACTTCTACCCAACATTAACATCAACTT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS CCA 90 bp AGATTCAAGTCCAAGAAATTACTATTTGAGGTGGGGTTTGCTGTGTaGTTCAAGTGCATGATGCTATTGCGTGGAAAGGCCATCCAAGGA +
Preference number: 5 (lower is better)
Translates to: RFKSKKLLFEVGFAV*FKCMMLLRGKAIQG
Trigger: TCCTTGGATGGCCTTTCCACGCAATAGCATCATGCACTTGAACCACACAGCAAACCCCACCTCAAATAGTAATTTCTTGGACTTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp ACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATCAGTAACTGCAGTATTTaGTTGTACCTAGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: TCSSQELISSHHPTTSIISNCSI*LYLEMP
Trigger: AGGCATCTCTAGGTACAACAAAATACTGCAGTTACT...GATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp GGTGGGCTGAGAGGGAGAAAACAGAGTGGGACAAATCCTGCATTTTCTAATGGTAGTAACTGCAGTATTTaGTTGTACCTAGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: GGLRGRKQSGTNPAFSNGSNCSI*LYLEMP
Trigger: AGGCATCTCTAGGTACAACAAAATACTGCAGTTACT...ACCATTAGAAAATGCAGGATTTGTCCCACTCTGTTTTCTCCCTCTCAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CACATGCTCGTCTCAGGAGCTTATCTCTTCCCACCACCCAACGACATCTATTATACATGCAGTCAGGTTTaGGACACTGCATATTCTTTA +
Preference number: 5 (lower is better)
Translates to: HMLVSGAYLFPPPNDIYYTCSQV*DTAYSL
Trigger: TAAAGAATATGCAGTGTCCAAAACCTGACTGCATGT...ATAATAGATGTCGTTGGGTGGTGGGAAGAGATAAGCTCCTGAGACGAGCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414802.5
CDS-3UTR CAA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAATGGGGATGACTGGATaGGATTTTGACAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCIMGMTG*DFDKPG
Trigger: ACCTGGTTTGTCAAAATCCAATCCAGTCATCCCCAT...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCAGAGCAGTGCTATCTCAGAGTGCCCTCGTCAGGTGAATTTATGGTAAAACAATTGGGATGGCGAAAATaGTCTGAGAATAACGACTGT +
Preference number: 5 (lower is better)
Translates to: PEQCYLRVPSSGEFMVKQLGWRK*SENNDC
Trigger: ACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAA...TTGTTTTACCATAAATTCACCTGACGAGGGCACTCTGAGATAGCACTGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACCAGAGCCTGGACCTTaGGCGGTTGTAGTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPPEPGP*AVVVCE
Trigger: TTCACACACTACAACCGCCAAAGGTCCAGGCTCTGG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCAAAGTGCATGATGCTATaGCGTGGAAAGGCCATCCAA +
Preference number: 5 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPKCMML*RGKAIQ
Trigger: TTGGATGGCCTTTCCACGCAATAGCATCATGCACTT...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTACAGAACTGCTGTaGTCTGCTACAGGGATCCCT +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLSTELL*SATGIP
Trigger: AGGGATCCCTGTAGCAGACAACAGCAGTTCTGTAGA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS GCA 90 bp AAGTCATCCTCTGGTTGTTTAGAAGAACCAAAGCCAAAAGCTGCTTaGCAGTCTGTAGAGGATGATACTGGGATTGTTTCTGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: KSSSGCLEEPKPKAA*QSVEDDTGIVSDVK
Trigger: CTTCACATCAGAAACAATCCCAGTATCATCCTCTACAGACTGGCAAGCAGCTTTTGGCTTTGGTTCTTCTAAACAACCAGAGGATGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 90 bp CCAAAGTTGATGTTAATGTTGGGTAGAAGTGCCCTTAGCCCGTCCTaGCATTCCTTCATATTTAAACTCTCTACAGAACTGCTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: PKLMLMLGRSALSPS*HSFIFKLSTELLLS
Trigger: AGACAACAGCAGTTCTGTAGAGAGTTTAAATATGAAGGAATGGCAGGACGGGCTAAGGGCACTTCTACCCAACATTAACATCAACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS-3UTR CAA 90 bp TCTGGGCTCCAGGTTAAAAATTCCTATGTTAAGGGAAAAGCTAGTCACTTTATACTAAAATGTAGGACTTaGACGACCCGCCTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SGLQVKNSYVKGKASHFILKCRT*TTRLPC
Trigger: GCAAGGCAGGCGGGTCGTCAAAGTCCTACATTTTAG...TATAAAGTGACTAGCTTTTCCCTTAACATAGGAATTTTTAACCTGGAGCCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACTAAAATGTAGGACTTaGACGACCCGCCTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLKCRT*TTRLPC
Trigger: GCAAGGCAGGCGGGTCGTCAAAGTCCTACATTTTAG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCACCATCTACTACCACATaGTTGACACACTGTATGGCT +
Preference number: 5 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPPSTTT*LTHCMA
Trigger: AGCCATACAGTGTGTCAACAATGTGGTAGTAGATGG...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATCTTCTGTTCATATTCTaGGTGTTTACCCGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: RFAILFRALANLGKLPDDLLFIF*VFTRLH
Trigger: ATGCAGGCGGGTAAACACCAAGAATATGAACAGAAG...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATATTGGGATGGCGAAAATaGTCTGAGAATAACGACTGT +
Preference number: 5 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCILGWRK*SENNDC
Trigger: ACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAA...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCGGGCGAAAGGGAAGGTaGGTCTTGAACGGACAGTTC +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFGRKGR*VLNGQF
Trigger: GAACTGTCCGTTCAAGACCAACCTTCCCTTTCGCCC...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTATTTGAGGTGGGGTTaGCTGTGTGGTTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLYLRWG*LCGSSA
Trigger: TGCACTTGAACCACACAGCAAACCCCACCTCAAATA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCAGAGAATCTGAAGGTTaGTCAATGGGGCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSRESEG*SMGLCS
Trigger: ACTGCAGAGCCCCATTGACAAACCTTCAGATTCTCT...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAAATGGCACTAACCACTaGCTATGGCTTTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCINGTNH*LWLCKK
Trigger: CTTCTTACAAAGCCATAGCAAGTGGTTAGTGCCATT...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCGGCAGGGAGATCGTTTaGCCATTTTATTTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSGREIV*PFYLGL
Trigger: GAGCCCTAAATAAAATGGCAAAACGATCTCCCTGCC...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGAGGGGGAAGAAGAATaGGGCAGTCCACCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPEGEEE*GSPPKL
Trigger: CAACTTTGGTGGACTGCCCAATTCTTCTTCCCCCTC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AACACGCTAGCTGTAGGCATGAGGAACGTTTATATTGGCTCTTCTGGGTGTATAAGTAACTGCAGTATTTaGTTGTACCTAGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: NTLAVGMRNVYIGSSGCISNCSI*LYLEMP
Trigger: AGGCATCTCTAGGTACAACAAAATACTGCAGTTACT...TATACACCCAGAAGAGCCAATATAAACGTTCCTCATGCCTACAGCTAGCGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCTTCTGTTCATATTCTaGGTGTTTACCCGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLLLFIF*VFTRLH
Trigger: ATGCAGGCGGGTAAACACCAAGAATATGAACAGAAG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGAGAGAATCTGAAGGTTaGTCAATGGGGGTATCGTAC +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLRESEG*SMGVSY
Trigger: GTACGATACCCCCATTGACAAACCTTCAGATTCTCT...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423368.6
ENST00000541284.5
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCCAAGTCATCCTCTGGTaGTTTAGAAGAACCAAAGCC +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSQVILW*FRRTKA
Trigger: GGCTTTGGTTCTTCTAAACAACCAGAGGATGACTTG...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGCAAGTCATCCTCTGGTaGTTTAGAAGAACCAAAGCC +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLQVILW*FRRTKA
Trigger: GGCTTTGGTTCTTCTAAACAACCAGAGGATGACTTG...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAAGGGAAGGTTGGTCTaGAACGGACAGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPKGRLV*NGQFLL
Trigger: GAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCTT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCCTCCTCTCAGTTCTGTaGTCAGGCCACAGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIILLSVL*SGHSSV
Trigger: CACACTACTGTGGCCTGACAACAGAACTGAGAGGAG...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCATGCAAAAATCCAGTaGCCCATGCAAGCACCCCAG +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFHAKIQ*PMQAPQ
Trigger: CTGGGGTGCTTGCATGGGCAACTGGATTTTTGCATG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTTGGGATGGCGAAAATaGTCTGAGAATAACGACTGT +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLLGWRK*SENNDC
Trigger: ACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAA...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCCCACTTGGGATAGGGTaGGGATGGCGAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIPLGIG*GWRKLS
Trigger: AGACAATTTTCGCCATCCCAACCCTATCCCAAGTGG...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAAGGGAAGGTTGGTCTaGAACGGACAGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIKGRLV*NGQFLL
Trigger: GAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCTT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCAAGGGAAGGTTGGTCTaGAACGGACAGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFKGRLV*NGQFLL
Trigger: GAGAAGGAACTGTCCGTTCAAGACCAACCTTCCCTT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp AGCTCCACAGGAGACATAAGTGAAGTCTTGGCCTCTTACAGTAAAAATGAAAACGTACTATTGAGAGAATaGGCATTTGTAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SSTGDISEVLASYSKNENVLLRE*AFVAAA
Trigger: TGCTGCAGCTACAAATGCCAATTCTCTCAATAGTAC...GTTTTCATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTCTCCTGTGGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp CACCTCCTTATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGGTACTATTGAGAGAATaGGCATTTGTAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: HLLMNSLAIGQLLLQMNLVLLRE*AFVAAA
Trigger: TGCTGCAGCTACAAATGCCAATTCTCTCAATAGTAC...CAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATAAGGAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAAGTGCATGATGCTATaGCGTGGAAAGGCCATCCAA +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPKCMML*RGKAIQ
Trigger: TTGGATGGCCTTTCCACGCAATAGCATCATGCACTT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCATATTTGAGGTGGGGTTaGCTGTGTGGTTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPYLRWG*LCGSSA
Trigger: TGCACTTGAACCACACAGCAAACCCCACCTCAAATA...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACATGCAGTCAGGTTTaGGACACTGCATATTCTTTA +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSTCSQV*DTAYSL
Trigger: TAAAGAATATGCAGTGTCCAAAACCTGACTGCATGT...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACTTCTGTTCATATTCTaGGTGTTTACCCGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLLFIF*VFTRLH
Trigger: ATGCAGGCGGGTAAACACCAAGAATATGAACAGAAG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAATGGGGATGACTGGATaGGATTTTGACAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPMGMTG*DFDKPG
Trigger: ACCTGGTTTGTCAAAATCCAATCCAGTCATCCCCAT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCAAGTGCATGATGCTATaGCGTGGAAAGGCCATCCAA +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFKCMML*RGKAIQ
Trigger: TTGGATGGCCTTTCCACGCAATAGCATCATGCACTT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCTATTTGAGGTGGGGTTaGCTGTGTGGTTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFYLRWG*LCGSSA
Trigger: TGCACTTGAACCACACAGCAAACCCCACCTCAAATA...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCTATTTGAGGTGGGGTTaGCTGTGTGGTTCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIYLRWG*LCGSSA
Trigger: TGCACTTGAACCACACAGCAAACCCCACCTCAAATA...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCACTGCTCCATATATAGAGGTAACCTaGAAAACTCCAACTCCAACA +
Preference number: 5 (lower is better)
Translates to: HVGRIWSCFLNQLLSTAPYIEVT*KTPTPT
Trigger: TGTTGGAGTTGGAGTTTTCAAGGTTACCTCTATATA...TGGAGCAGTGGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATTTGATTTCAATTTGCTaGCTATGTGAAGTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RFAILFRALANLGKLPDDLISIC*LCEVVA
Trigger: AGCCACTACTTCACATAGCAAGCAAATTGAAATCAA...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp CGTTTTGCCATTTTATTTAGGGCTCTGGCAAATCTGGGCAAACTACCTGATGATTATATTAAGTTTCCCTaGCACATGATGCATCATGCA +
Preference number: 5 (lower is better)
Translates to: RFAILFRALANLGKLPDDYIKFP*HMMHHA
Trigger: TGCATGATGCATCATGTGCAAGGGAAACTTAATATA...ATCATCAGGTAGTTTGCCCAGATTTGCCAGAGCCCTAAATAAAATGGCAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCCCATCTACTACCACATaGTTGACACACTGTATGGCT +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIPSTTT*LTHCMA
Trigger: AGCCATACAGTGTGTCAACAATGTGGTAGTAGATGG...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCCTTCTGTTCATATTCTaGGTGTTTACCCGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIILLFIF*VFTRLH
Trigger: ATGCAGGCGGGTAAACACCAAGAATATGAACAGAAG...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCAGAGAATCTGAAGGTTaGTCAATGGGGGTATCGTAC +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIIRESEG*SMGVSY
Trigger: GTACGATACCCCCATTGACAAACCTTCAGATTCTCT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315544.6
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCATGGGGATGACTGGATaGGATTTTGACAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFMGMTG*DFDKPG
Trigger: ACCTGGTTTGTCAAAATCCAATCCAGTCATCCCCAT...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAGTACTATTGAGAGAATaGGCATTTGTAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPVLLRE*AFVAAA
Trigger: TGCTGCAGCTACAAATGCCAATTCTCTCAATAGTAC...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CAGATGCTTCATGTAGGCAGAATATGGTCATGTTTTCTGAATCAGCTTTTGTCCTATATAGAGGTAACCTaGAAAACTCCAACTCCAACA +
Preference number: 5 (lower is better)
Translates to: QMLHVGRIWSCFLNQLLSYIEVT*KTPTPT
Trigger: TGTTGGAGTTGGAGTTTTCAAGGTTACCTCTATATA...GGACAAAAGCTGATTCAGAAAACATGACCATATTCTGCCTACATGAAGCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCAAGTAACTGCAGTATTTaGTTGTACCTAGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPSNCSI*LYLEMP
Trigger: AGGCATCTCTAGGTACAACAAAATACTGCAGTTACT...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCTTGGGATGGCGAAAATaGTCTGAGAATAACGACTGT +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFLGWRK*SENNDC
Trigger: ACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAA...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCGTACTATTGAGAGAATaGGCATTTGTAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFVLLRE*AFVAAA
Trigger: TGCTGCAGCTACAAATGCCAATTCTCTCAATAGTAC...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp AATCTCTTCTCTTCTGCCTTAGTCTCATTCTGGTCAGGTACTTATAATATTATCACATGCAGTCAGGTTTaGGACACTGCATATTCTTTA +
Preference number: 5 (lower is better)
Translates to: NLFSSALVSFWSGTYNIITCSQV*DTAYSL
Trigger: TAAAGAATATGCAGTGTCCAAAACCTGACTGCATGT...GATAATATTATAAGTACCTGACCAGAATGAGACTAAGGCAGAAGAGAAGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS-3UTR CAA 90 bp TATGAACTCTTTAGCAATCGGCCAGTTACTACTACAGATGAATTTGTCTTTCCACTACTACAGATGAATTaGTCTTTCCATCAACTTCCA +
Preference number: 5 (lower is better)
Translates to: YELFSNRPVTTTDEFVFPLLQMN*SFHQLP
Trigger: TGGAAGTTGATGGAAAGACAAATTCATCTGTAGTAG...TGGAAAGACAAATTCATCTGTAGTAGTAACTGGCCGATTGCTAAAGAGTTCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCCCCAAAAAGCATTTCTaGATTTACGGTGTGCATGTA +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFPKKHF*IYGVHV
Trigger: TACATGCACACCGTAAATCAAGAAATGCTTTTTGGG...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS-3UTR CAA 90 bp CCACAGAATTACTGTTTGTTCAGTAACAATGTTACACTACTATGGTTGCTTTTCGACATAAGTGAAGTCTaGGCCTCTTACAGTAAAAAT +
Preference number: 5 (lower is better)
Translates to: PQNYCLFSNNVTLLWLLFDISEV*ASYSKN
Trigger: ATTTTTACTGTAAGAGGCCAAGACTTCACTTATGTC...GAAAAGCAACCATAGTAGTGTAACATTGTTACTGAACAAACAGTAATTCTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428680.6
CDS CCA 72 bp CTGTGCAGCGGGATCTGTGTGCTGAAGGGGGCGCTGTaGTGGGTCTGTGATGGAGCAGCGCTGGGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: LCSGICVLKGAL*WVCDGAALGPS
Trigger: GGACGGCCCCAGCGCTGCTCCATCACAGACCCACCACAGCGCCCCCTTCAGCACACAGATCCCGCTGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361528.8
ENST00000423368.6
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS GCA 72 bp CCTTGCCTCGCTTTTCCCTCAGCCGACTCCACGGGCTaGCGCGTCCTCACAAGAAACCACCGAACGAGCGTC +
Preference number: 6 (lower is better)
Translates to: PCLAFPSADSTG*RVLTRNHRTSV
Trigger: GACGCTCGTTCGGTGGTTTCTTGTGAGGACGCGGCAGCCCGTGGAGTCGGCTGAGGGAAAAGCGAGGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CCA 72 bp GGCTGTCCCAACTCAGGCTGTCGGTGGTGGCAGTGTTaGACGTTGGTGCACTGTGGTTGGCGTTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: GCPNSGCRWWQC*TLVHCGWRWRG
Trigger: CCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 72 bp GGGCTGTCCCAACTCAGGCTGTCGGTGGTGGCAGTGTaGGACGTTGGTGCACTGTGGTTGGCGTTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: GLSQLRLSVVAV*DVGALWLALEG
Trigger: CCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 72 bp TCCAGCTGCCAGGGCTGTCCCAACTCAGGCTGTCGGTaGTGGCAGTGTTGGACGTTGGTGCACTGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: SSCQGCPNSGCR*WQCWTLVHCGW
Trigger: CCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCCCTGGCAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 90 bp CAGCTGCCAGGGCTGTCCCAACTCAGGCTGTCGGTGGTGGCAGTGTaGGACGTTGGTGCACTGTGGTTGGCGTTGGAGGGGGAAGAAGAA +
Preference number: 6 (lower is better)
Translates to: QLPGLSQLRLSVVAV*DVGALWLALEGEEE
Trigger: TTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCCCTGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS TCA 72 bp GATTCCAACTGGCTCTGTGCAGCGGGATCTGTGTGCTaGAGGGGGCGCTGTGGTGGGTCTGTGATGGAGCAG +
Preference number: 6 (lower is better)
Translates to: DSNWLCAAGSVC*RGRCGGSVMEQ
Trigger: CTGCTCCATCACAGACCCACCACAGCGCCCCCTTCAGCACACAGATCCCGCTGCACAGAGCCAGTTGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361528.8
ENST00000423368.6
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 72 bp CCCAACTCAGGCTGTCGGTGGTGGCAGTGTTGGACGTaGGTGCACTGTGGTTGGCGTTGGAGGGGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: PNSGCRWWQCWT*VHCGWRWRGKK
Trigger: CTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 90 bp CAGGGCTGTCCCAACTCAGGCTGTCGGTGGTGGCAGTGTTGGACGTaGGTGCACTGTGGTTGGCGTTGGAGGGGGAAGAAGAATTGGGCA +
Preference number: 6 (lower is better)
Translates to: QGCPNSGCRWWQCWT*VHCGWRWRGKKNWA
Trigger: TGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGGGACAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 72 bp CGGTGGTGGCAGTGTTGGACGTTGGTGCACTGTGGTTaGCGTTGGAGGGGGAAGAAGAATTGGGCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: RWWQCWTLVHCG*RWRGKKNWAVH
Trigger: GTGGACTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 72 bp CCAACTCAGGCTGTCGGTGGTGGCAGTGTTGGACGTTaGTGCACTGTGGTTGGCGTTGGAGGGGGAAGAAGA +
Preference number: 6 (lower is better)
Translates to: PTQAVGGGSVGR*CTVVGVGGGRR
Trigger: TCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS TCA 72 bp GGAGCAGCGCTGGGGCCGTCCATCTCTGTGAGGGCCTaGAGGGATTTTAGCCAGTGTGGAGGATTGTCATCT +
Preference number: 6 (lower is better)
Translates to: GAALGPSISVRA*RDFSQCGGLSS
Trigger: AGATGACAATCCTCCACACTGGCTAAAATCCCTTCAGGCCCTCACAGAGATGGACGGCCCCAGCGCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361528.8
ENST00000423368.6
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS GCA 72 bp GCTCCCCAATTAAAGAAATTCTCGAAGGAGAGTCGCTaGTTGCCGCCGCGCTGCCTTCTGACCCGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: APQLKKFSKESR*LPPRCLLTRSL
Trigger: AAGGGAGCGGGTCAGAAGGCAGCGCGGCGGCAAGCAGCGACTCTCCTTCGAGAATTTCTTTAATTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465721.1
ENST00000491203.5
CDS CCA 72 bp CTGTCGGTGGTGGCAGTGTTGGACGTTGGTGCACTGTaGTTGGCGTTGGAGGGGGAAGAAGAATTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: LSVVAVLDVGAL*LALEGEEELGS
Trigger: ACTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 90 bp GCCTCGGCTCCCCAATTAAAGAAATTCTCGAAGGAGAGTCGCTGCTaGCCGCCGCGCTGCCTTCTGACCCGCTCCCTTTTCCTTATGGTA +
Preference number: 6 (lower is better)
Translates to: ASAPQLKKFSKESRC*PPRCLLTRSLFLMV
Trigger: TACCATAAGGAAAAGGGAGCGGGTCAGAAGGCAGCGCGGCGGCAAGCAGCGACTCTCCTTCGAGAATTTCTTTAATTGGGGAGCCGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465721.1
CDS TCA 72 bp GGGCCTGATTGCTTCAGCGAGTCCGACCTTTACGGCTaGGAGAGAGACTCTCAGCTTTCGGTGGGTTCCACA +
Preference number: 6 (lower is better)
Translates to: GPDCFSESDLYG*ERDSQLSVGST
Trigger: TGTGGAACCCACCGAAAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGTCGGACTCGCTGAAGCAATCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 72 bp ACTCAGGCTGTCGGTGGTGGCAGTGTTGGACGTTGGTaGACTGTGGTTGGCGTTGGAGGGGGAAGAAGAATT +
Preference number: 6 (lower is better)
Translates to: TQAVGGGSVGRW*TVVGVGGGRRI
Trigger: AATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAGCCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 72 bp CCCCAATTAAAGAAATTCTCGAAGGAGAGTCGCTGCTaGCCGCCGCGCTGCCTTCTGACCCGCTCCCTTTTC +
Preference number: 6 (lower is better)
Translates to: PQLKKFSKESRC*PPRCLLTRSLF
Trigger: GAAAAGGGAGCGGGTCAGAAGGCAGCGCGGCGGCAAGCAGCGACTCTCCTTCGAGAATTTCTTTAATTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465721.1
ENST00000491203.5
CDS GCA 72 bp AAATTCTCGAAGGAGAGTCGCTGCTTGCCGCCGCGCTaGCTTCTGACCCGCTCCCTTTTCCTTATGGTAACT +
Preference number: 6 (lower is better)
Translates to: KFSKESRCLPPR*LLTRSLFLMVT
Trigger: AGTTACCATAAGGAAAAGGGAGCGGGTCAGAAGGCAGCGCGGCGGCAAGCAGCGACTCTCCTTCGAGAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465721.1
CDS CCA 72 bp GTTTGCTGTGTGGTTCAAGTGCATGATGCTATTGCGTaGAAAGGCCATCCAAGGATAGCGGGCTGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: VCCVVQVHDAIA*KGHPRIAGCLA
Trigger: GGCCAGGCAGCCCGCTATCCTTGGATGGCCTTTCCACGCAATAGCATCATGCACTTGAACCACACAGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CCA 72 bp TGGCAGTGTTGGACGTTGGTGCACTGTGGTTGGCGTTaGAGGGGGAAGAAGAATTGGGCAGTCCACCAAAGT +
Preference number: 6 (lower is better)
Translates to: WQCWTLVHCGWR*RGKKNWAVHQS
Trigger: ACTTTGGTGGACTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 90 bp GCCCATGCAAGCACCCCAGAGTCTAATCCTCTCCTCTCAGTTCTGTaGTCAGGCCACAGTAGTGTGGAGACTTGTAGGCTGCTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: AHASTPESNPLLSVL*SGHSSVETCRLLSL
Trigger: CAAGGACAGCAGCCTACAAGTCTCCACACTACTGTGGCCTGACAACAGAACTGAGAGGAGAGGATTAGACTCTGGGGTGCTTGCATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS CAA 90 bp CTGTCGGTGGTGGCAGTGTTGGACGTTGGTGCACTGTGGTTGGCGTaGGAGGGGGAAGAAGAATTGGGCAGTCCACCAAAGTTGATGTTA +
Preference number: 6 (lower is better)
Translates to: LSVVAVLDVGALWLA*EGEEELGSPPKLML
Trigger: TAACATCAACTTTGGTGGACTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAACACTGCCACCACCGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 72 bp ACCTTTACGGCTGAGAGAGAGACTCTCAGCTTTCGGTaGGTTCCACAGCCAGACGGGCCACCATCTTACATT +
Preference number: 6 (lower is better)
Translates to: TFTAERETLSFR*VPQPDGPPSYI
Trigger: AATGTAAGATGGTGGCCCGTCTGGCTGTGGAACCCACCGAAAGCTGAGAGTCTCTCTCTCAGCCGTAAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000541284.5
CDS TCA 72 bp GAATCCAGAGCCTGGACCTTTGGCGGTTGTAGTGTGTaGAGAGGAGTTCTGAAGAGATGTGGGCGAAAGGGA +
Preference number: 6 (lower is better)
Translates to: ESRAWTFGGCSV*RGVLKRCGRKG
Trigger: TCCCTTTCGCCCACATCTCTTCAGAACTCCTCTTCACACACTACAACCGCCAAAGGTCCAGGCTCTGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 72 bp TCCCCTGCTACAGGGATCCCTCCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAGTCCAAGAAATTACTA +
Preference number: 6 (lower is better)
Translates to: SPATGIPPRPVL*CGGRFKSKKLL
Trigger: TAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS CAA 72 bp TCTTCCCCTGCTACAGGGATCCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTCAAGTCCAAGAAATTA +
Preference number: 6 (lower is better)
Translates to: SSPATGIPPRPV*CCGGRFKSKKL
Trigger: TAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS CAA 72 bp AGCACCCCAGAGTCTAATCCTCTCCTCTCAGTTCTGTaGTCAGGCCACAGTAGTGTGGAGACTTGTAGGCTG +
Preference number: 6 (lower is better)
Translates to: STPESNPLLSVL*SGHSSVETCRL
Trigger: CAGCCTACAAGTCTCCACACTACTGTGGCCTGACAACAGAACTGAGAGGAGAGGATTAGACTCTGGGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS CAA 90 bp TTGGACGTTGGTGCACTGTGGTTGGCGTTGGAGGGGGAAGAAGAATaGGGCAGTCCACCAAAGTTGATGTTAATGTTGGGTAGAAGTGCC +
Preference number: 6 (lower is better)
Translates to: LDVGALWLALEGEEE*GSPPKLMLMLGRSA
Trigger: GGCACTTCTACCCAACATTAACATCAACTTTGGTGGACTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CCA 72 bp GAGCGTCTTCTGACCGGATATAGGTTACATAAGCACTaGCACTTGGACCCTGTGAGCCTGCATATGATGTGC +
Preference number: 6 (lower is better)
Translates to: ERLLTGYRLHKH*HLDPVSLHMMC
Trigger: GCACATCATATGCAGGCTCACAGGGTCCAAGTGCCAGTGCTTATGTAACCTATATCCGGTCAGAAGACGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CAA 72 bp GAGCTGGGGAAAGGAGGAAGCCCACTTGGGATAGGGTaGGGATGGCGAAAATTGTCTGAGAATAACGACTGT +
Preference number: 6 (lower is better)
Translates to: ELGKGGSPLGIG*GWRKLSENNDC
Trigger: ACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAACCCTATCCCAAGTGGGCTTCCTCCTTTCCCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CAA 72 bp GGAATACCTGCTACAGGGATCCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTCAAGTCCAAGAAATTA +
Preference number: 6 (lower is better)
Translates to: GIPATGIPPRPV*CCGGRFKSKKL
Trigger: TAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGGTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361528.8
ENST00000423368.6
CDS CAA 72 bp CTGTTGTCTGCTACAGGGATCCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTCAAGTCCAAGAAATTA +
Preference number: 6 (lower is better)
Translates to: LLSATGIPPRPV*CCGGRFKSKKL
Trigger: TAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS CAA 90 bp TTCACCTCTTCTTCCCCTGCTACAGGGATCCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTCAAGTCCAAGAAATTACTATTTGAG +
Preference number: 6 (lower is better)
Translates to: FTSSSPATGIPPRPV*CCGGRFKSKKLLFE
Trigger: CTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGGGGAAGAAGAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS CAA 90 bp GAAGACGCTGGAATACCTGCTACAGGGATCCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTCAAGTCCAAGAAATTACTATTTGAG +
Preference number: 6 (lower is better)
Translates to: EDAGIPATGIPPRPV*CCGGRFKSKKLLFE
Trigger: CTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGGTATTCCAGCGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361528.8
ENST00000423368.6
CDS TCA 72 bp CCATCCAAGGATAGCGGGCTGCCTGGCCTGGAAAACTaGATGAATTATAAACCGCTCGGTGCTGCTGAAATT +
Preference number: 6 (lower is better)
Translates to: PSKDSGLPGLEN*MNYKPLGAAEI
Trigger: AATTTCAGCAGCACCGAGCGGTTTATAATTCATTCAGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 72 bp ATACCTGCTACAGGGATCCCTCCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAGTCCAAGAAATTACTA +
Preference number: 6 (lower is better)
Translates to: IPATGIPPRPVL*CGGRFKSKKLL
Trigger: TAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361528.8
ENST00000423368.6
CDS GCA 72 bp TTGTCTGCTACAGGGATCCCTCCCAGACCTGTGTTGTaGTGTGGCGGGAGATTCAAGTCCAAGAAATTACTA +
Preference number: 6 (lower is better)
Translates to: LSATGIPPRPVL*CGGRFKSKKLL
Trigger: TAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS CCA 72 bp GGGAAAGGAGGAAGCCCACTTGGGATAGGGTTGGGATaGCGAAAATTGTCTGAGAATAACGACTGTGACTCT +
Preference number: 6 (lower is better)
Translates to: GKGGSPLGIGLG*RKLSENNDCDS
Trigger: AGAGTCACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAACCCTATCCCAAGTGGGCTTCCTCCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CAA 72 bp GGAAGCCCACTTGGGATAGGGTTGGGATGGCGAAAATaGTCTGAGAATAACGACTGTGACTCTGTTACTGCC +
Preference number: 6 (lower is better)
Translates to: GSPLGIGLGWRK*SENNDCDSVTA
Trigger: GGCAGTAACAGAGTCACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAACCCTATCCCAAGTGGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CAA 72 bp GAAGAATTGGGCAGTCCACCAAAGTTGATGTTAATGTaGGGTAGAAGTGCCCTTAGCCCGTCCTGCCATTCC +
Preference number: 6 (lower is better)
Translates to: EELGSPPKLMLM*GRSALSPSCHS
Trigger: GGAATGGCAGGACGGGCTAAGGGCACTTCTACCCAACATTAACATCAACTTTGGTGGACTGCCCAATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 90 bp GGGAAAGGAGGAAGCCCACTTGGGATAGGGTTGGGATGGCGAAAATaGTCTGAGAATAACGACTGTGACTCTGTTACTGCCCCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: GKGGSPLGIGLGWRK*SENNDCDSVTAPSK
Trigger: TTTTGAAGGGGCAGTAACAGAGTCACAGTCGTTATTCTCAGACAATTTTCGCCATCCCAACCCTATCCCAAGTGGGCTTCCTCCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CAA 90 bp ACAGAACTGCTGTTGTCTGCTACAGGGATCCCTCCCAGACCTGTGTaGTGCTGTGGCGGGAGATTCAAGTCCAAGAAATTACTATTTGAG +
Preference number: 6 (lower is better)
Translates to: TELLLSATGIPPRPV*CCGGRFKSKKLLFE
Trigger: CTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCTGTAGCAGACAACAGCAGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451834.5
ENST00000541284.5
CDS TCA 72 bp TATTTGAGGTGGGGTTTGCTGTGTGGTTCAAGTGCATaGTGCTATTGCGTGGAAAGGCCATCCAAGGATAGC +
Preference number: 6 (lower is better)
Translates to: YLRWGLLCGSSA*CYCVERPSKDS
Trigger: GCTATCCTTGGATGGCCTTTCCACGCAATAGCATCATGCACTTGAACCACACAGCAAACCCCACCTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 72 bp TGTTGTCAGGCCACAGTAGTGTGGAGACTTGTAGGCTaGTGTCCTTGTTGTAATGAATGGGAAGAGGTTGAC +
Preference number: 6 (lower is better)
Translates to: CCQATVVWRLVG*CPCCNEWEEVD
Trigger: GTCAACCTCTTCCCATTCATTACAACAAGGACAGCAGCCTACAAGTCTCCACACTACTGTGGCCTGACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315544.6
ENST00000428680.6
CDS CAA 72 bp AATGGTTGCTCCTCTTTGCCTAATGGCGGTCCAGTGTaGAACTCTGTAGTAAATCTGTGGGGGTTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: NGCSSLPNGGPV*NSVVNLWGFCW
Trigger: CCAGCAAAACCCCCACAGATTTACTACAGAGTTCAACACTGGACCGCCATTAGGCAAAGAGGAGCAACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423368.6
ENST00000451834.5
ENST00000541284.5
CDS CAA 90 bp GAGGGGGAAGAAGAATTGGGCAGTCCACCAAAGTTGATGTTAATGTaGGGTAGAAGTGCCCTTAGCCCGTCCTGCCATTCCTTCATATTT +
Preference number: 6 (lower is better)
Translates to: EGEEELGSPPKLMLM*GRSALSPSCHSFIF
Trigger: AAATATGAAGGAATGGCAGGACGGGCTAAGGGCACTTCTACCCAACATTAACATCAACTTTGGTGGACTGCCCAATTCTTCTTCCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5
CDS CAA 90 bp GTTGTACCTAGAGATGCCTTAAGTGTTCTGCCATCTACTACCACATaGTTGACACACTGTATGGCTCTGAGAGCGTCTTCTGACCGGATA +
Preference number: 6 (lower is better)
Translates to: VVPRDALSVLPSTTT*LTHCMALRASSDRI
Trigger: TATCCGGTCAGAAGACGCTCTCAGAGCCATACAGTGTGTCAACAATGTGGTAGTAGATGGCAGAACACTTAAGGCATCTCTAGGTACAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS TCA 72 bp GGCAAATCTGGTAGCCACAGGTGCAAGGGAAAAAGTTaGTATCATCTATCTCCAAGGGCTCCATGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: GKSGSHRCKGKS*YHLSPRAPCKE
Trigger: CTCTTTGCATGGAGCCCTTGGAGATAGATGATATCAACTTTTTCCCTTGCACCTGTGGCTACCAGATTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000465721.1
ENST00000491203.5
ENST00000498534.5
ENST00000541284.5
CDS TCA 72 bp ATTGTTGACACACTGTATGGCTCTGAGAGCGTCTTCTaGCCGGATATAGGTTACATAAGCACTGGCACTTGG +
Preference number: 6 (lower is better)
Translates to: IVDTLYGSESVF*PDIGYISTGTW
Trigger: CCAAGTGCCAGTGCTTATGTAACCTATATCCGGTCAGAAGACGCTCTCAGAGCCATACAGTGTGTCAACAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS TCA 72 bp CTGGGAATTATCACCGTTCCCTATACTGAGAGAATCTaGAGGTTTGTCAATGGGGGTATCGTACCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LGIITVPYTERI*RFVNGGIVPLQ
Trigger: CTGCAGAGGTACGATACCCCCATTGACAAACCTTCAGATTCTCTCAGTATAGGGAACGGTGATAATTCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315544.6
ENST00000414802.5
ENST00000423368.6
ENST00000541284.5
CDS CAA 72 bp TTATCACCGTTCCCTATACTGAGAGAATCTGAAGGTTaGTCAATGGGGGTATCGTACCTCTGCAGTGGTGTC +
Preference number: 6 (lower is better)
Translates to: LSPFPILRESEG*SMGVSYLCSGV
Trigger: GACACCACTGCAGAGGTACGATACCCCCATTGACAAACCTTCAGATTCTCTCAGTATAGGGAACGGTGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315544.6
ENST00000414802.5
ENST00000423368.6
ENST00000541284.5
CDS TCA 72 bp GTGCTGCTGAAATTGAGGGAACCTCTGGGGCAAGACTaGAAAGGTACTATTGAGAGAATTGGCATTTGTAGC +
Preference number: 6 (lower is better)
Translates to: VLLKLREPLGQD*KGTIERIGICS
Trigger: GCTACAAATGCCAATTCTCTCAATAGTACCTTTTCAGTCTTGCCCCAGAGGTTCCCTCAATTTCAGCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS CAA 72 bp GACATCGAAGGGATCAAAACCCAAGTCATCCTCTGGTaGTTTAGAAGAACCAAAGCCAAAAGCTGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: DIEGIKTQVILW*FRRTKAKSCLP
Trigger: TGGCAAGCAGCTTTTGGCTTTGGTTCTTCTAAACAACCAGAGGATGACTTGGGTTTTGATCCCTTCGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315544.6
ENST00000361528.8
ENST00000414802.5
ENST00000423368.6
ENST00000428680.6
ENST00000451834.5
ENST00000541284.5
CDS GCA 72 bp ATGTTAATGTTGGGTAGAAGTGCCCTTAGCCCGTCCTaGCATTCCTTCATATTTAAACTCTCTACAGAACTG +
Preference number: 6 (lower is better)
Translates to: MLMLGRSALSPS*HSFIFKLSTEL
Trigger: CAGTTCTGTAGAGAGTTTAAATATGAAGGAATGGCAGGACGGGCTAAGGGCACTTCTACCCAACATTAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451834.5
ENST00000473470.1
ENST00000541284.5