RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNOT10 (Homo sapiens)

Ensembl gene IDs: ENSG00000182973

Ensembl transcript IDs: ENST00000328834.9, ENST00000331889.10, ENST00000416457.5, ENST00000435630.5, ENST00000454516.7, ENST00000455381.5, ENST00000466103.1, ENST00000468599.1, ENST00000473064.1, ENST00000476967.1, ENST00000481526.5, ENST00000485136.5, ENST00000494439.5, ENST00000556853.5

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGTCTCAGGTAACAGTTTTCCAAAAGTGAAGTATCACTTTCTCTaGACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGG +
Preference number: 1 (lower is better)
Translates to: WVSGNSFPKVKYHFL*TVVKAGIWMGWIGW
Trigger: CCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTTCACTTTTGGAAAACTGTTACCTGAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR TCA 90 bp GAAGAGATCCCTAAGGAGACATCAGTGACATTCTCCGGGTTCAAGTaGGTAATGGCATCAGATATTCTGTCGAGAGAGATGAGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: EEIPKETSVTFSGFK*VMASDILSREMRAS
Trigger: AGAAGCCCTCATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAGGGATCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR TCA 90 bp GGCCGAAGACTGCCCATCATTATAAACAGTATTCTGTATAGACTGTaGTGCCAAAACTATTTTACGATGATAGCCTTGACCAACAATAGA +
Preference number: 1 (lower is better)
Translates to: GRRLPIIINSILYRL*CQNYFTMIALTNNR
Trigger: TCTATTGTTGGTCAAGGCTATCATCGTAAAATAGTTTTGGCATCACAGTCTATACAGAATACTGTTTATAATGATGGGCAGTCTTCGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR TCA 90 bp TTTAAGAAAGAGAGAGGGTGCGGAATTTCCAGCTGTATTCATGACTaGCTTGATTTCCCTTTTACATGCTTTCAGAGACTTCATTTGGAT +
Preference number: 1 (lower is better)
Translates to: FKKERGCGISSCIHD*LDFPFTCFQRLHLD
Trigger: ATCCAAATGAAGTCTCTGAAAGCATGTAAAAGGGAAATCAAGTCAGTCATGAATACAGCTGGAAATTCCGCACCCTCTCTCTTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455381.5
3UTR-3UTR TCA 90 bp CTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTCCTCAGGCAGTAAGCGCTCAGTCCTGGCAGAGTTaGCGGAACTGGGGTAGCACT +
Preference number: 2 (lower is better)
Translates to: LVETLSGFVIFAPQAVSAQSWQS*RNWGST
Trigger: AGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTG...AGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR GCA 90 bp AAGATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTGAAGCCGCCTGGTGGCCTTATTGGCAGCAATaGAGCATTCAGCCAGCCGTA +
Preference number: 2 (lower is better)
Translates to: KMASGGTSLGWIIEAAWWPYWQQ*SIQPAV
Trigger: TACGGCTGGCTGAATGCTGCATTGCTGCCAATAAGG...CCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CCA 90 bp AAGATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTGAAGCCGCCTGGTGGCTGCAAACTCCATACTaGCTACAGGAATGGCCGAAG +
Preference number: 2 (lower is better)
Translates to: KMASGGTSLGWIIEAAWWLQTPY*LQEWPK
Trigger: CTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAG...CCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR TCA 90 bp CTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTCCTCAGGCAGTAAGCGCTCAGTGCTACCTGCACTaGGCTGTGCACAGACATTGT +
Preference number: 2 (lower is better)
Translates to: LVETLSGFVIFAPQAVSAQCYLH*AVHRHC
Trigger: ACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTG...AGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR TCA 90 bp GCCAGCAAGATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTGAAGCCGCCAAGGTGGAGCTGGAATaGATTTATCTCCATCATGGC +
Preference number: 2 (lower is better)
Translates to: ASKMASGGTSLGWIIEAAKVELE*IYLHHG
Trigger: GCCATGATGGAGATAAATTCATTCCAGCTCCACCTT...GGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR GCA 90 bp GGCAGAGTTGACGGAACTGGGGTAGCACTGAGGGGCCCGCTTACCAGAGGATTCTTAGCCCCATTTTCCTaGTTTGGATCTTGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: GRVDGTGVALRGPLTRGFLAPFS*FGSCCS
Trigger: AGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAA...GAATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CCA 90 bp GGCAGAGTTGACGGAACTGGGGTAGCACTGAGGGGCCCGCTTACCAGAGGATTCGTGATACAACTAAAATaGCCAGTAAATTCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: GRVDGTGVALRGPLTRGFVIQLK*PVNSPL
Trigger: CAGGGGAGAATTTACTGGCCATTTTAGTTGTATCAC...GAATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR CAA 90 bp AAAAGTGAAGTATCACTTTCTCTGCACAGTGGTGAAAGCCGGCATTaGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: KSEVSLSLHSGESRH*DGLDRVDRLKHWLL
Trigger: AAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTTCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR GCA 90 bp CAATGCAGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTACCTGCACTGAGCTGTaGACAGACATTGTCATTCTC +
Preference number: 2 (lower is better)
Translates to: QCSIQPAVARGEDLHDKPTCTEL*TDIVIL
Trigger: GAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGT...AGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR-3UTR GCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCCAGAGGCGAGGATTTaGATGATAAACCTGAACAGC +
Preference number: 2 (lower is better)
Translates to: FGWAGSGGQAETLASFSLPEARI*MINLNS
Trigger: GCTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGG...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CCA 90 bp AGCAAGATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTGAAGCCGCCTGGTTGCTCATGGCAAAATaGATGCAACCAAGGTTATTC +
Preference number: 2 (lower is better)
Translates to: SKMASGGTSLGWIIEAAWLLMAK*MQPRLF
Trigger: GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA...CCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR TCA 90 bp AGCAAGATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTGAAGCCGCCTGGAGAAGTTTATCTGCATaGTTCAAAGCCATGAGGTTA +
Preference number: 2 (lower is better)
Translates to: SKMASGGTSLGWIIEAAWRSLSA*FKAMRL
Trigger: TAACCTCATGGCTTTGAATCATGCAGATAAACTTCT...CCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR GCA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTCATGGCAAAATGGATaGAACCAAGGTTATTCCAGA +
Preference number: 2 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVSWQNG*NQGYSR
Trigger: TCTGGAATAACCTTGGTTGCATCCATTTTGCCATGA...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR GCA 90 bp GGATCTTGCTGTTCTTCAGGTAGCAGCAACAAGGCATTTCTGAGACATATGGCTTGGATCAGTGCTACCTaGACTGAGCTGTGCACAGAC +
Preference number: 2 (lower is better)
Translates to: GSCCSSGSSNKAFLRHMAWISAT*TELCTD
Trigger: GTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCA...AGCCATATGTCTCAGAAATGCCTTGTTGCTGCTACCTGAAGAACAGCAAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR GCA 90 bp GTTATCACCCAAAGCCAGAGCCACGTAGGCACTGCAAGCAAGTATGGAGCACTTCATGGCTTTTACTGCTaGAAGTTTCACTGCTTTCGC +
Preference number: 2 (lower is better)
Translates to: VITQSQSHVGTASKYGALHGFYC*KFHCFR
Trigger: GCGAAAGCAGTGAAACTTGCAGCAGTAAAAGCCATG...AAGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR TCA 90 bp ATTCGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATCAGTGCTACCTGCACTaGGCTGTGCACAGACATTGT +
Preference number: 2 (lower is better)
Translates to: IRRQQEAFQCEEAEFHSYQCYLH*AVHRHC
Trigger: ACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTG...ATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR-3UTR GCA 90 bp GTTATCACCCAAAGCCAGAGCCACGTAGGCACTGCAAGCAAGTATGGAGCACTTTTCCCAAATTGTGCTTaGTCATGGCAAAATGGATGC +
Preference number: 2 (lower is better)
Translates to: VITQSQSHVGTASKYGALFPNCA*SWQNGC
Trigger: GCATCCATTTTGCCATGAGCAAGCACAATTTGGGAA...AAGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CCA 90 bp AGCCGCCTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTCCTCAGGCAGTACACTGCAAGCAAGTATaGAGCACTTTAAGTTTTCTA +
Preference number: 2 (lower is better)
Translates to: SRLVETLSGFVIFAPQAVHCKQV*STLSFL
Trigger: TAGAAAACTTAAAGTGCTCCATACTTGCTTGCAGTG...TACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR GCA 90 bp TTGCTCATGGCAAAATGGATGCAACCAAGGTTATTCCAGAACATGCATCTCAAGTGGATCAGTGCTACCTaGACTGAGCTGTGCACAGAC +
Preference number: 2 (lower is better)
Translates to: LLMAKWMQPRLFQNMHLKWISAT*TELCTD
Trigger: GTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCA...CTTGAGATGCATGTTCTGGAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455381.5
3UTR-3UTR GCA 90 bp CAATGCAGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTAATATTCCCAAATTGTaGTTGCTCATGGCAAAATGG +
Preference number: 2 (lower is better)
Translates to: QCSIQPAVARGEDLHDKPNIPKL*LLMAKW
Trigger: CCATTTTGCCATGAGCAAGCACAATTTGGGAATATT...AGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR-3UTR GCA 90 bp GACATCAGTGACATTCTCCGGGTTCAAGTGAGTAATGGCATCAGATATTCTGTCTTTCACTGCTTTCGCTaGTCTCTGTGTTCCCACCTA +
Preference number: 2 (lower is better)
Translates to: DISDILRVQVSNGIRYSVFHCFR*SLCSHL
Trigger: TAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAA...GACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CCA 90 bp AGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTGAACAGACTCATATCTCTTATTaGTTAGTAACGTACACATGG +
Preference number: 2 (lower is better)
Translates to: SIQPAVARGEDLHDKPEQTHISY*LVTYTW
Trigger: CCATGTGTACGTTACTAACCAATAAGAGATATGAGT...CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR CAA 90 bp ATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTaGCAGAGCCTTTTTAAAGTAGAATATTCCCAAATTGTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: ISATCTELCTDIVIL*QSLFKVEYSQIVLA
Trigger: AGCAAGCACAATTTGGGAATATTCTACTTTAAAAAGGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR-3UTR GCA 90 bp ATTCGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATTCATGGCAAAATGGATaGAACCAAGGTTATTCCAGA +
Preference number: 2 (lower is better)
Translates to: IRRQQEAFQCEEAEFHSYSWQNG*NQGYSR
Trigger: TCTGGAATAACCTTGGTTGCATCCATTTTGCCATGA...ATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR-3UTR CCA 90 bp CAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAGCAACTCATTTGCTCATGGCAAAATaGATGCAACCAAGGTTATTC +
Preference number: 2 (lower is better)
Translates to: QEAFQCEEAEFHSYTATHLLMAK*MQPRLF
Trigger: GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA...ATGAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR-3UTR CCA 90 bp TTGCTCATGGCAAAATGGATGCAACCAAGGTTATTCCAGAACATGCATCTCAAGAATTGTGCTTGCTCATaGCAAAATGGATGCAACCAA +
Preference number: 2 (lower is better)
Translates to: LLMAKWMQPRLFQNMHLKNCACS*QNGCNQ
Trigger: TTGGTTGCATCCATTTTGCCATGAGCAAGCACAATT...CTTGAGATGCATGTTCTGGAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455381.5
3UTR-3UTR GCA 90 bp AATCCTGGATGCTCAGCAATGTTTGAACTATTTAATAGCTTCACGGCTTTTCGATTCCCAAATTGTGCTTaGTCATGGCAAAATGGATGC +
Preference number: 2 (lower is better)
Translates to: NPGCSAMFELFNSFTAFRFPNCA*SWQNGC
Trigger: GCATCCATTTTGCCATGAGCAAGCACAATTTGGGAA...TCGAAAAGCCGTGAAGCTATTAAATAGTTCAAACATTGCTGAGCATCCAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455381.5
3UTR CCA 72 bp GCCAGCAAGATGGCCTCAGGGGGCACCTCTTTAGGATaGATCATTGAAGCCGCCTGGTGGAGACACTTTCGG +
Preference number: 3 (lower is better)
Translates to: ASKMASGGTSLG*IIEAAWWRHFR
Trigger: CCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR TCA 72 bp GCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTaGAACACTGGCTTCTTTCTCACTTCAGAGTGTGTT +
Preference number: 3 (lower is better)
Translates to: AGIWMGWIGWTG*NTGFFLTSECV
Trigger: AACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
3UTR-3UTR CAA 90 bp AGCCGCCTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTCCTCAGGCAGTACCCCATTTTCCTGCTTaGGATCTTGCTGTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: SRLVETLSGFVIFAPQAVPHFPA*DLAVLQ
Trigger: CTGAAGAACAGCAAGATCCAAAGCAGGAAAATGGGG...TACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CAA 90 bp GTTGAACAGCATCACAGTCCTGGCAGAGTTGACGGAACTGGGGTAGCACTGAGGGCTTCATTTTCACCTTaGTCTGATCCTTGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: VEQHHSPGRVDGTGVALRASFSP*SDPWSC
Trigger: GCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGC...CCTCAGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CAA 90 bp CCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGCAGCTGTGCACAGACATaGTCATTCTCTTGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: PGSVLPALSCAQTLSFSCSCAQT*SFSCRA
Trigger: GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCT...GCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR-3UTR CAA 90 bp CAATGCAGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTATTCCCAAATTGTGCTaGCTCATGGCAAAATGGATG +
Preference number: 3 (lower is better)
Translates to: QCSIQPAVARGEDLHDKPIPKLC*LMAKWM
Trigger: CATCCATTTTGCCATGAGCAAGCACAATTTGGGAAT...AGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR GCA 72 bp GGTAACAGTTTTCCAAAAGTGAAGTATCACTTTCTCTaGACAGTGGTGAAAGCCGGCATTTGGATGGGCTGG +
Preference number: 3 (lower is better)
Translates to: GNSFPKVKYHFL*TVVKAGIWMGW
Trigger: CCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATACTTCACTTTTGGAAAACTGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CAA 90 bp TGGCTGCAAACTCCATACTGGCTACAGGAATGGCCGAAGACTGCCCATCATTATTGTACAATTCCTTTTTaGCTGGGAAGGCCTTTAGTT +
Preference number: 3 (lower is better)
Translates to: WLQTPYWLQEWPKTAHHYCTIPF*LGRPLV
Trigger: AACTAAAGGCCTTCCCAGCAAAAAAGGAATTGTACA...ATAATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR TCA 72 bp CCTAAGGAGACATCAGTGACATTCTCCGGGTTCAAGTaGGTAATGGCATCAGATATTCTGTCGAGAGAGATG +
Preference number: 3 (lower is better)
Translates to: PKETSVTFSGFK*VMASDILSREM
Trigger: CATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CAA 90 bp ACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGGTATTCATGACTGACTaGATTTCCCTTTTACATGCT +
Preference number: 3 (lower is better)
Translates to: TWISATCTELCTDIVILLVFMTD*ISLLHA
Trigger: AGCATGTAAAAGGGAAATCAAGTCAGTCATGAATAC...CAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455381.5
3UTR-3UTR CAA 90 bp GAGCCACGTAGGCACTGCAAGCAAGTATGGAGCACTTTAAGTTTTCTAATTCCTATTCCCAAATTGTGCTaGCTCATGGCAAAATGGATG +
Preference number: 3 (lower is better)
Translates to: EPRRHCKQVWSTLSFLIPIPKLC*LMAKWM
Trigger: CATCCATTTTGCCATGAGCAAGCACAATTTGGGAAT...AGGAATTAGAAAACTTAAAGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR-3UTR CAA 90 bp AATCCTGGATGCTCAGCAATGTTTGAACTATTTAATAGCTTCACGGCTTTTCGAAGCTGTGCACAGACATaGTCATTCTCTTGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: NPGCSAMFELFNSFTAFRSCAQT*SFSCRA
Trigger: GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCT...TCGAAAAGCCGTGAAGCTATTAAATAGTTCAAACATTGCTGAGCATCCAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455381.5
3UTR-3UTR CAA 90 bp AGAATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTTATGCCAGAGGCGAGGATTaGCATGATAAACCTGAACAG +
Preference number: 3 (lower is better)
Translates to: RIFPNCACSWQNGCNQGYARGED*HDKPEQ
Trigger: CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGC...ATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR TCA 72 bp GAGAGAGGGTGCGGAATTTCCAGCTGTATTCATGACTaGCTTGATTTCCCTTTTACATGCTTTCAGAGACTT +
Preference number: 3 (lower is better)
Translates to: ERGCGISSCIHD*LDFPFTCFQRL
Trigger: AAGTCTCTGAAAGCATGTAAAAGGGAAATCAAGTCAGTCATGAATACAGCTGGAAATTCCGCACCCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455381.5
3UTR-3UTR CAA 90 bp AGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAGCAACTCTTTACGATGATAGCCTaGACCAACAATAGACTGTAC +
Preference number: 3 (lower is better)
Translates to: SKRPSNVKKLNSTVIQQLFTMIA*TNNRLY
Trigger: GTACAGTCTATTGTTGGTCAAGGCTATCATCGTAAA...GAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR GCA 72 bp CATGGCTTTTACTGCTGCAAGTTTCACTGCTTTCGCTaGTCTCTGTGTTCCCACCTAATTGATTACTATTTT +
Preference number: 3 (lower is better)
Translates to: HGFYCCKFHCFR*SLCSHLIDYYF
Trigger: AAAATAGTAATCAATTAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAACTTGCAGCAGTAAAAGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
3UTR GCA 72 bp ATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATaGAACCAAGGTTATTCCAGAACATGCATCTCAAGC +
Preference number: 3 (lower is better)
Translates to: IFPNCACSWQNG*NQGYSRTCISS
Trigger: GCTTGAGATGCATGTTCTGGAATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455381.5
3UTR-3UTR CAA 90 bp ATTCGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATGACATTGTCATTCTCTaGCAGAGCCTTTTTAAAGTA +
Preference number: 3 (lower is better)
Translates to: IRRQQEAFQCEEAEFHSYDIVIL*QSLFKV
Trigger: TACTTTAAAAAGGCTCTGCAAGAGAATGACAATGTC...ATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
3UTR TCA 72 bp CTGCCCATCATTATAAACAGTATTCTGTATAGACTGTaGTGCCAAAACTATTTTACGATGATAGCCTTGACC +
Preference number: 3 (lower is better)
Translates to: LPIIINSILYRL*CQNYFTMIALT
Trigger: GGTCAAGGCTATCATCGTAAAATAGTTTTGGCATCACAGTCTATACAGAATACTGTTTATAATGATGGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACGGCGGGCTGAGGAAGTaGCGAGAGCTAGTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDGGLRK*RELVPV
Trigger: GACGGGAACTAGCTCTCGTCACTTCCTCAGCCCGCC...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR CCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACGGCTGGCCGCTGTCCTaGACCTCCGAGGACAACTCT +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDGWPLS*TSEDNS
Trigger: AGAGTTGTCCTCGGAGGTCCAGGACAGCGGCCAGCC...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR CCA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAGCCGGCATTTGGATaGGCTGGATCGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLKPAFG*AGSGGQ
Trigger: CTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTT...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCCGAGGACAACTCTGTaGCTACCCCGGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLPRTTL*LPRLRA
Trigger: GGCCCGGAGCCGGGGTAGGCACAGAGTTGTCCTCGG...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR GCA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGACTCGGGTTCTTCCCTaGAGGTGGCGTGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVTRVLP*RWRGPD
Trigger: GTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGT...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR CCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCATTCCGGCTAGAGGAGTaGGCAGACGGCGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSFRLEE*ADGGLR
Trigger: CCTCAGCCCGCCGTCTGCCCACTCCTCTAGCCGGAA...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR CCA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAGCCACTGTGCCTGGTaGAGACACTTTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLSHCAW*RHFRAL
Trigger: CAAAGCCCGAAAGTGTCTCCACCAGGCACAGTGGCT...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACCTGGTCTCAAACTCCTaGCCTCATGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDLVSNS*PHDPPA
Trigger: GGCAGGCGGATCATGAGGTCAGGAGTTTGAGACCAG...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR CCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACGTGAAAGCCGGCATTTaGATGGGCTGGATCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDVKAGI*MGWIGW
Trigger: CCACCCGATCCAGCCCATCCAAATGCCGGCTTTCAC...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp GCCAGCAAGATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTGAAGCCGCCTTCTCTGCACAGTGGTaGAAGCCGGCATTTGGATGG +
Preference number: 4 (lower is better)
Translates to: ASKMASGGTSLGWIIEAAFSAQW*KPAFGW
Trigger: CCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAA...GGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGCAGAGGACTGACCTGTaGCTTCATGTTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLQRTDL*LHVSLL
Trigger: GAGCAGAGAAACATGAAGGCACAGGTCAGTCCTCTG...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp GGCAGAGTTGACGGAACTGGGGTAGCACTGAGGGGCCCGCTTACCAGAGGATTCACAGCTGAGTGGACCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: GRVDGTGVALRGPLTRGFTAEWT*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGGTCCACTCAGCTGT...GAATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGAGGCATGAGCCACTGTaGCTGGTGGAGACACTTTCG +
Preference number: 4 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVRHEPL*LVETLS
Trigger: CGAAAGTGTCTCCACCAGGCACAGTGGCTCATGCCT...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGCAGTGCTACCTGCACTaGGCTGTGCACAGACATTGT +
Preference number: 4 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVQCYLH*AVHRHC
Trigger: ACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTG...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACCCTTATTGGCAGCAATaGAGCATTCAGCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDPYWQQ*SIQPAV
Trigger: TACGGCTGGCTGAATGCTGCATTGCTGCCAATAAGG...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCAGAGCCACGTAGGCACTaGAAGCAAGTATGGAGCACC +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSEPRRH*KQVWST
Trigger: GGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTC...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR CCA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGGAGATCCTGACAGCTTaGGCTGCTGAAGAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLEILTA*AAEEVY
Trigger: ATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTC...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp GATGGATCATTGAAGCCGCCTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCAAGCCGGCATTTGGATaGGCTGGATCGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: DGSLKPPGGDTFGLCHIRKPAFG*AGSGGQ
Trigger: CTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTT...GCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCAATGAGCCACTGTGCCTaGTGGAGACACTTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSMSHCA*WRHFRA
Trigger: AGCCCGAAAGTGTCTCCACCAGGCACAGTGGCTCAT...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
3UTR CAA 72 bp GTATCACTTTCTCTGCACAGTGGTGAAAGCCGGCATTaGGATGGGCTGGATCGGGTGGACAGGCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: VSLSLHSGESRH*DGLDRVDRLKH
Trigger: GTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACCCTTCTCTTGATCAGTaGTCCCAGAGGACTGACCTG +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHPSLDQ*SQRTDL
Trigger: CAGGTCAGTCCTCTGGGATCACTGATCAAGAGAAGG...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAAACTTAAGAGATCCTaGCAGCTTGGGCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDKLKRS*QLGLLK
Trigger: CTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTT...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACTTCTGTCGAGAGAGATaGGGGCTTCTGCAGCATATA +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDFCRER*GLLQHI
Trigger: TATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAA...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTCAGTCCTGGCAGAGTTaGCGGAACTGGGGTAGCACT +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFQSWQS*RNWGST
Trigger: AGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTG...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp AGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTGAACAGAAGCGCTGCCAAGGTTaGACAGCATCACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SIQPAVARGEDLHDKPEQKRCQG*TASQSW
Trigger: CCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTT...CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCCGAGGACAACTCTGTaGCTACCCCGGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLPRTTL*LPRLRA
Trigger: GGCCCGGAGCCGGGGTAGGCACAGAGTTGTCCTCGG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR GCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACCAAGTATGGAGCACCTaGAAGTTTCACTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDQVWST*KFHCFR
Trigger: GCGAAAGCAGTGAAACTTGCAGGTGCTCCATACTTG...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR CCA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGTGGACTGTGAAAGCTTaGAAAGCATTGGTGGATAAC +
Preference number: 4 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLWTVKA*KALVDN
Trigger: GTTATCCACCAATGCTTTCCAAGCTTTCACAGTCCA...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp AGCAAGATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTGAAGCCGCCTGGCATGATTCAAAGCCATaGGGTTATCACCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SKMASGGTSLGWIIEAAWHDSKP*GYHPKP
Trigger: TGGCTTTGGGTGATAACCTCATGGCTTTGAATCATG...CCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACCATGATTCAAAGCCATaGGGTTATCACCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDHDSKP*GYHPKP
Trigger: TGGCTTTGGGTGATAACCTCATGGCTTTGAATCATG...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp GTTGAACAGCATCACAGTCCTGGCAGAGTTGACGGAACTGGGGTAGCACTGAGGAAACTTAAGAGATCCTaGCAGCTTGGGCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VEQHHSPGRVDGTGVALRKLKRS*QLGLLK
Trigger: CTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTT...CCTCAGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp CGGGTTCAAGTGAGTAATGGCATCAGATATTCTGTCGAGAGAGATGAGGGCTTCCAGTCCTGGCAGAGTTaGCGGAACTGGGGTAGCACT +
Preference number: 4 (lower is better)
Translates to: RVQVSNGIRYSVERDEGFQSWQS*RNWGST
Trigger: AGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTG...GAAGCCCTCATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTAAGCGCTGCCAAGGTTaGACAGCATCACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFKRCQG*TASQSW
Trigger: CCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTT...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGACTGCAGGGAGCAGCTaGTTCCTTTTGATGATCTGT +
Preference number: 4 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVTAGSS*FLLMIC
Trigger: ACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGT...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp AGCCGCCTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTCCTCAGGCAGTACCAGAGGCGAGGATTTaGATGATAAACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: SRLVETLSGFVIFAPQAVPEARI*MINLNS
Trigger: GCTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGG...TACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACCTTATTGGCAGCAATaGAGCATTCAGCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSPYWQQ*SIQPAV
Trigger: TACGGCTGGCTGAATGCTGCATTGCTGCCAATAAGG...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGACCAGAGGATTCCATTaGTTCATTTTCACCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLTRGFH*FIFTFV
Trigger: GACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGT...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAATTGTGCTTGCTCATaGCAAAATGGATGCAACCAA +
Preference number: 4 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLNCACS*QNGCNQ
Trigger: TTGGTTGCATCCATTTTGCCATGAGCAAGCACAATT...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGCAGAAGTCCCCTTATTaGCAGCAATGCAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVQKSPY*QQCSIQ
Trigger: CTGAATGCTGCATTGCTGCCAATAAGGGGACTTCTG...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTGTGATCCCAGAGGACTaGCCTGTGCCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFVIPED*PVPSCF
Trigger: GAAACATGAAGGCACAGGTCAGTCCTCTGGGATCAC...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp AGCCGCCTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTCCTCAGGCAGTACATTTCTTCAACAGCTaGGTGGACCTGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SRLVETLSGFVIFAPQAVHFFNS*VDLILQ
Trigger: CTGAAGAATCAGGTCCACTCAGCTGTTGAAGAAATG...TACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCTGTCGAGAGAGATaGGGGCTTCTGCAGCATATA +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHFCRER*GLLQHI
Trigger: TATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAA...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTTTCTCTGCACAGTGGTaGAAGCCGGCATTTGGATGG +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFFSAQW*KPAFGW
Trigger: CCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAA...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGCTGAGTGGACTGTaGAAGCTTGGAAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLQLSGL*KLGKHW
Trigger: CCAATGCTTTCCAAGCTTTCACAGTCCACTCAGCTG...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCACTCGGGTTCTTCCCTaGAGGTGGCGTGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLTRVLP*RWRGPD
Trigger: GTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR GCA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGAGGACAGCAAGAAGATaGAAAGCTTTCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVRTARR*KAFSAW
Trigger: CCAAGCTGAGAAAGCTTTGCATCTTCTTGCTGTCCT...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAAGAAAGAGAGAGGGTaGGGAATTTCCAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDKKERG*GISSCI
Trigger: AATACAGCTGGAAATTCCGCACCCTCTCTCTTTCTT...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR GCA 90 bp GGCAGAGTTGACGGAACTGGGGTAGCACTGAGGGGCCCGCTTACCAGAGGATTCAATATTCCCAAATTGTaGTTGCTCATGGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: GRVDGTGVALRGPLTRGFNIPKL*LLMAKW
Trigger: CCATTTTGCCATGAGCAAGCACAATTTGGGAATATT...GAATCCTCTGGTAAGCGGGCCCCTCAGTGCTACCCCAGTTCCGTCAACTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTTGGATCAGTGCTACCTaGACTGAGCTGTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFWISAT*TELCTD
Trigger: GTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCA...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp ACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGTGGATCAGTGCTACCTaGACTGAGCTGTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: TWISATCTELCTDIVILLWISAT*TELCTD
Trigger: GTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCA...CAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR GCA 90 bp CAATGCAGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTCCTTATTGGCAGCAATaGAGCATTCAGCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: QCSIQPAVARGEDLHDKPPYWQQ*SIQPAV
Trigger: TACGGCTGGCTGAATGCTGCATTGCTGCCAATAAGG...AGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR GCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTCCTGCTTTGGATCTTaGTGTTCTTCAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHSCFGS*CSSGSS
Trigger: GCTGCTACCTGAAGAACAGCAAGATCCAAAGCAGGA...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTTCACTGCTTTCGCTaGTCTCTGTGTTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHFHCFR*SLCSHL
Trigger: TAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAA...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGGCTGGCCGCTGTCCTaGACCTCCGAGGACAACTCT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLGWPLS*TSEDNS
Trigger: AGAGTTGTCCTCGGAGGTCCAGGACAGCGGCCAGCC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR CCA 90 bp TCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGCAGAGCCTACTGGCTACAGGAATaGCCGAAGACTGCCCATCAT +
Preference number: 4 (lower is better)
Translates to: SVLPALSCAQTLSFSCRAYWLQE*PKTAHH
Trigger: ATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTA...GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp GTTGAACAGCATCACAGTCCTGGCAGAGTTGACGGAACTGGGGTAGCACTGAGGTTCCTGTTTTCTCAATaGAGAAGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VEQHHSPGRVDGTGVALRFLFSQ*RRRWSW
Trigger: CCAGCTCCACCTTCTTCTCCATTGAGAAAACAGGAA...CCTCAGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGCCTTTGTCTGATCCTTaGTCCTGCTCATTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVPLSDP*SCSFEE
Trigger: CTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGG...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACTCTTCAACAGCTGAGTaGACTGTGAAAGCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDSSTAE*TVKAWK
Trigger: TTTCCAAGCTTTCACAGTCCACTCAGCTGTTGAAGA...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCTAAGGAGACATCAGTaGCATTCTCCGGGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLLRRHQ*HSPGSS
Trigger: ACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAG...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACTCATGGCAAAATGGATaGAACCAAGGTTATTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDSWQNG*NQGYSR
Trigger: TCTGGAATAACCTTGGTTGCATCCATTTTGCCATGA...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTACCTGCACTGAGCTGTaGACAGACATTGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLTCTEL*TDIVIL
Trigger: GAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGT...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTCTGAGACATATGGCTaGAAACTCCATACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHSETYG*KLHTGY
Trigger: GTAGCCAGTATGGAGTTTGCAGCCATATGTCTCAGA...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCATCTGAGACATATGGCTaGAAACTCCATACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSSETYG*KLHTGY
Trigger: GTAGCCAGTATGGAGTTTGCAGCCATATGTCTCAGA...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGACTCATATCTCTTATTaGTTAGTAACGTACACATGG +
Preference number: 4 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLTHISY*LVTYTW
Trigger: CCATGTGTACGTTACTAACCAATAAGAGATATGAGT...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTTACTGGCTACAGGAATaGCCGAAGACTGCCCATCAT +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFYWLQE*PKTAHH
Trigger: ATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTA...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTCTGCAAACTCCATACTaGCTACAGGAATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFLQTPY*LQEWPK
Trigger: CTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAG...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp CGGGTTCAAGTGAGTAATGGCATCAGATATTCTGTCGAGAGAGATGAGGGCTTCATTGAAGCCGCCTGGTaGAGACACTTTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RVQVSNGIRYSVERDEGFIEAAW*RHFRAL
Trigger: CAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAAT...GAAGCCCTCATCTCTCTCGACAGAATATCTGATGCCATTACTCACTTGAACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp AGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAGCAACTCAGACTGCCAGCAAGATaGCCTCAGGGGGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SKRPSNVKKLNSTVIQQLRLPAR*PQGAPL
Trigger: AAGAGGTGCCCCCTGAGGCCATCTTGCTGGCAGTCT...GAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp CTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTCCTCAGGCAGTAAGCGCTGACAGGCTGAAACACTaGCTTCTTTCTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LVETLSGFVIFAPQAVSADRLKH*LLSHFR
Trigger: TCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTC...AGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCACTGCAAGCAAGTATaGAGCACCTGCAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLHCKQV*STCKFH
Trigger: GTGAAACTTGCAGGTGCTCCATACTTGCTTGCAGTG...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTGATAACTCCTTCTCTTaGTCAGTGATCCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFDNSFS*SVIPED
Trigger: GTCCTCTGGGATCACTGATCAAGAGAAGGAGTTATC...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACATTCACCTGTTTTCATaGATCCTGGATGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHIHLFS*ILDAQQ
Trigger: TTGCTGAGCATCCAGGATTCATGAAAACAGGTGAAT...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR TCA 90 bp TGCAAACTCCATACTGGCTACAGGAATGGCCGAAGACTGCCCATCATTATAAACCAGTGCTACCTGCACTaGGCTGTGCACAGACATTGT +
Preference number: 4 (lower is better)
Translates to: CKLHTGYRNGRRLPIIINQCYLH*AVHRHC
Trigger: ACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTG...GTTTATAATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp TTTTTACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCCAGTGCTACCTGCACTaGGCTGTGCACAGACATTGT +
Preference number: 4 (lower is better)
Translates to: FLPGSVLPALSCAQTLSFQCYLH*AVHRHC
Trigger: ACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTG...GAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR TCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACATTTTCACCTTTGTCTaGTCCTTGGTCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHIFTFV*SLVLLI
Trigger: AATGAGCAGGACCAAGGATCAGACAAAGGTGAAAAT...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCAGTCCTGGCAGAGTTaGCGGAACTGGGGTAGCACT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLQSWQS*RNWGST
Trigger: AGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCATTTCTTCAACAGCTaGGTGGACTGTGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLHFFNS*VDCESL
Trigger: CAAGCTTTCACAGTCCACTCAGCTGTTGAAGAAATG...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR GCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCAGGTTATTCCAGAACATaGATCTCAAGCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSGYSRT*ISSIHL
Trigger: CAGGTGAATGCTTGAGATGCATGTTCTGGAATAACC...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR GCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCATTCCCAAATTGTGCTTaGTCATGGCAAAATGGATGC +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSFPNCA*SWQNGC
Trigger: GCATCCATTTTGCCATGAGCAAGCACAATTTGGGAA...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp TGGCTGCAAACTCCATACTGGCTACAGGAATGGCCGAAGACTGCCCATCATTATACCTGCACTGAGCTGTaGACAGACATTGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: WLQTPYWLQEWPKTAHHYTCTEL*TDIVIL
Trigger: GAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGT...ATAATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp TGGCTGCAAACTCCATACTGGCTACAGGAATGGCCGAAGACTGCCCATCATTATTCCTGCTTTGGATCTTaGTGTTCTTCAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: WLQTPYWLQEWPKTAHHYSCFGS*CSSGSS
Trigger: GCTGCTACCTGAAGAACAGCAAGATCCAAAGCAGGA...ATAATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp GGATCTTGCTGTTCTTCAGGTAGCAGCAACAAGGCATTTCTGAGACATATGGCTGAGCCACGTAGGCACTaGAAGCAAGTATGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GSCCSSGSSNKAFLRHMAEPRRH*KQVWST
Trigger: AGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTC...AGCCATATGTCTCAGAAATGCCTTGTTGCTGCTACCTGAAGAACAGCAAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTTCTGATCCTTGGTCCTaGTCATTTGAAGAGATCCCT +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLSDPWS*SFEEIP
Trigger: AGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGA...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCCGGCTAGAGGAGTaGGCAGACGGCGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFRLEE*ADGGLR
Trigger: CCTCAGCCCGCCGTCTGCCCACTCCTCTAGCCGGAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAGACTGCCAGCAAGATaGCCTCAGGGGGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLRLPAR*PQGAPL
Trigger: AAGAGGTGCCCCCTGAGGCCATCTTGCTGGCAGTCT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
3UTR CAA 72 bp TGCAGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTaGCATGATAAACCTGAACAGCTTCAATCAGACATT +
Preference number: 4 (lower is better)
Translates to: CSIQPAVARGED*HDKPEQLQSDI
Trigger: AATGTCTGATTGAAGCTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGGCGGGCTGAGGAAGTaGCGAGAGCTAGTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKGGLRK*RELVPV
Trigger: GACGGGAACTAGCTCTCGTCACTTCCTCAGCCCGCC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR TCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTAAGGTGGAGCTGGAATaGATTTATCTCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFKVELE*IYLHHG
Trigger: GCCATGATGGAGATAAATTCATTCCAGCTCCACCTT...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp TCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGCAGAGCCATTTTCACCTTTGTCTaGTCCTTGGTCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: SVLPALSCAQTLSFSCRAIFTFV*SLVLLI
Trigger: AATGAGCAGGACCAAGGATCAGACAAAGGTGAAAAT...GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAAGCGCTGCCAAGGTTaGACAGCATCACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLKRCQG*TASQSW
Trigger: CCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAACTCGGGTTCTTCCCTaGAGGTGGCGTGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKTRVLP*RWRGPD
Trigger: GTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR GCA 90 bp AGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTGAACAGGGTTATTCCAGAACATaGATCTCAAGCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: SIQPAVARGEDLHDKPEQGYSRT*ISSIHL
Trigger: CAGGTGAATGCTTGAGATGCATGTTCTGGAATAACC...CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455381.5
CDS-3UTR GCA 90 bp GATGGATCATTGAAGCCGCCTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTTCCCAAATTGTGCTTaGTCATGGCAAAATGGATGC +
Preference number: 4 (lower is better)
Translates to: DGSLKPPGGDTFGLCHIRFPNCA*SWQNGC
Trigger: GCATCCATTTTGCCATGAGCAAGCACAATTTGGGAA...GCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp GAGCCACGTAGGCACTGCAAGCAAGTATGGAGCACTTTAAGTTTTCTAATTCCTTGGATCAGTGCTACCTaGACTGAGCTGTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: EPRRHCKQVWSTLSFLIPWISAT*TELCTD
Trigger: GTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCA...AGGAATTAGAAAACTTAAAGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTTTAGCCCCATTTTCCTaGTTTGGATCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLLAPFS*FGSCCS
Trigger: AGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAA...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCAACCAGAGGATTCCATTaGTTCATTTTCACCTTTGTC +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSTRGFH*FIFTFV
Trigger: GACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGT...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGTTCTTCCCTGCAGGTaGCGTGGCCCTGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSVLPCR*RGPDSR
Trigger: GCGGGAGTCAGGGCCACGCCACCTGCAGGGAAGAAC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR CCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTTTTCACCAACTGATATaGCTTCTGTATACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLFHQLI*LLYTAA
Trigger: TGCGGCAGTATACAGAAGCCATATCAGTTGGTGAAA...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp AGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTGAACAGTTTCACCAACTGATATaGCTTCTGTATACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SIQPAVARGEDLHDKPEQFHQLI*LLYTAA
Trigger: TGCGGCAGTATACAGAAGCCATATCAGTTGGTGAAA...CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTGCTCATGGCAAAATaGATGCAACCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHLLMAK*MQPRLF
Trigger: GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp GGATCTTGCTGTTCTTCAGGTAGCAGCAACAAGGCATTTCTGAGACATATGGCTCTGCAAACTCCATACTaGCTACAGGAATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GSCCSSGSSNKAFLRHMALQTPY*LQEWPK
Trigger: CTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAG...AGCCATATGTCTCAGAAATGCCTTGTTGCTGCTACCTGAAGAACAGCAAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTGACAGGCTGAAACACTaGCTTCTTTCTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFDRLKH*LLSHFR
Trigger: TCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTC...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGGCGGGCTGAGGAAGTaGCGAGAGCTAGTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSGGLRK*RELVPV
Trigger: GACGGGAACTAGCTCTCGTCACTTCCTCAGCCCGCC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGTGATCCCAGAGGACTaGCCTGTGCCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLVIPED*PVPSCF
Trigger: GAAACATGAAGGCACAGGTCAGTCCTCTGGGATCAC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCCTTCTCTTGATCAGTaGTCCCAGAGGACTGACCTG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLPSLDQ*SQRTDL
Trigger: CAGGTCAGTCCTCTGGGATCACTGATCAAGAGAAGG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCAGTGCTACCTGCACTaGGCTGTGCACAGACATTGT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLQCYLH*AVHRHC
Trigger: ACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCAAGAAGTTTATCTGCATaGTTCAAAGCCATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: AFGWAGSGGQAETLASFSRSLSA*FKAMRL
Trigger: TAACCTCATGGCTTTGAATCATGCAGATAAACTTCT...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTTTCTCCGGGTTCAAGTaGGTAATGGCATCAGATATT +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFFSGFK*VMASDI
Trigger: AATATCTGATGCCATTACTCACTTGAACCCGGAGAA...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR TCA 90 bp GAGCCACGTAGGCACTGCAAGCAAGTATGGAGCACTTTAAGTTTTCTAATTCCTTTTAGGATGGATCATTaGAGCCGCCTGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: EPRRHCKQVWSTLSFLIPFRMDH*SRLVET
Trigger: TGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAA...AGGAATTAGAAAACTTAAAGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp TTTTTACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCACTGCAGGGAGCAGCTaGTTCCTTTTGATGATCTGT +
Preference number: 4 (lower is better)
Translates to: FLPGSVLPALSCAQTLSFTAGSS*FLLMIC
Trigger: ACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGT...GAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp CCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGCTCATGGCAAAATGGATaGAACCAAGGTTATTCCAGA +
Preference number: 4 (lower is better)
Translates to: PGSVLPALSCAQTLSFSCSWQNG*NQGYSR
Trigger: TCTGGAATAACCTTGGTTGCATCCATTTTGCCATGA...GCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR GCA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACAATATTCCCAAATTGTaGTTGCTCATGGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHNIPKL*LLMAKW
Trigger: CCATTTTGCCATGAGCAAGCACAATTTGGGAATATT...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTGGATCAGTGCTACCTaGACTGAGCTGTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLWISAT*TELCTD
Trigger: GTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp CGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACATTTCACTGCTTTCGCTaGTCTCTGTGTTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: RRQQEAFQCEEAEFHSYTFHCFR*SLCSHL
Trigger: TAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAA...TGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp TGCAAACTCCATACTGGCTACAGGAATGGCCGAAGACTGCCCATCATTATAAACTGCTGCAAGTTTCACTaGTTTCGCTGCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CKLHTGYRNGRRLPIIINCCKFH*FRCSLC
Trigger: ACACAGAGAGCAGCGAAAGCAGTGAAACTTGCAGCA...GTTTATAATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp CAATGCAGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTCATCATGGCTTTTACTaGTGCAAGTTTCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: QCSIQPAVARGEDLHDKPHHGFY*CKFHCF
Trigger: AAAGCAGTGAAACTTGCAGCAGTAAAAGCCATGATG...AGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGAGCCACGTAGGCACTaGAAGCAAGTATGGAGCACT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLEPRRH*KQVWST
Trigger: AGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp CAATGCAGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTTTGCTCATGGCAAAATaGATGCAACCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: QCSIQPAVARGEDLHDKPLLMAK*MQPRLF
Trigger: GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA...AGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CCA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTAATTGTGCTTGCTCATaGCAAAATGGATGCAACCAA +
Preference number: 4 (lower is better)
Translates to: FGWAGSGGQAETLASFSLNCACS*QNGCNQ
Trigger: TTGGTTGCATCCATTTTGCCATGAGCAAGCACAATT...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CCA 90 bp GTTATCACCCAAAGCCAGAGCCACGTAGGCACTGCAAGCAAGTATGGAGCACTTAGAAGAAGGTGGAGCTaGAATGAATTTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: VITQSQSHVGTASKYGALRRRWS*NEFISI
Trigger: GATGGAGATAAATTCATTCCAGCTCCACCTTCTTCT...AAGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGGCACCTCTTTAGGATaGATCATTGAAGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLGTSLG*IIEAAW
Trigger: CCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTTATTCCAGAACATGCAGGCACCTCTTTAGGATaGATCATTGAAGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVLAHGKMDATKVIPEHAGTSLG*IIEAAW
Trigger: CCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCC...TGCATGTTCTGGAATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp AAAGTAGAATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTGAAAGCCGGCATTTaGATGGGCTGGATCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KVEYSQIVLAHGKMDATKVKAGI*MGWIGW
Trigger: CCACCCGATCCAGCCCATCCAAATGCCGGCTTTCAC...CTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTTTAGGATGGATCATTaGAGCCGCCTGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLFRMDH*SRLVET
Trigger: TGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCCTTATTGGCAGCAATaGAGCATTCAGCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLPYWQQ*SIQPAV
Trigger: TACGGCTGGCTGAATGCTGCATTGCTGCCAATAAGG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GGATCTTGCTGTTCTTCAGGTAGCAGCAACAAGGCATTTCTGAGACATATGGCTCATGGCTTTTACTGCTaGAAGTTTCACTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: GSCCSSGSSNKAFLRHMAHGFYC*KFHCFR
Trigger: GCGAAAGCAGTGAAACTTGCAGCAGTAAAAGCCATG...AGCCATATGTCTCAGAAATGCCTTGTTGCTGCTACCTGAAGAACAGCAAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp GTTATCACCCAAAGCCAGAGCCACGTAGGCACTGCAAGCAAGTATGGAGCACTTGGTTATTCCAGAACATaGATCTCAAGCATTCACATT +
Preference number: 4 (lower is better)
Translates to: VITQSQSHVGTASKYGALGYSRT*ISSIHI
Trigger: AATGTGAATGCTTGAGATGCATGTTCTGGAATAACC...AAGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp GGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGTGTTTAAGCTTGGAAAGCATTaGTGGATAACTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSGGQAETLASFSLQSVFKLGKH*WITPSL
Trigger: AAGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTT...AAACACACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS-3UTR CCA 90 bp ACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGAATTGTGCTTGCTCATaGCAAAATGGATGCAACCAA +
Preference number: 4 (lower is better)
Translates to: TWISATCTELCTDIVILLNCACS*QNGCNQ
Trigger: TTGGTTGCATCCATTTTGCCATGAGCAAGCACAATT...CAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CCA 90 bp GCTTACCAGAGGATTCCATTGCTTCATTTTCACCTTTGTCTGATCCTTGGTCCTCAGAAGTCCCCTTATTaGCAGCAATGCAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: AYQRIPLLHFHLCLILGPQKSPY*QQCSIQ
Trigger: CTGAATGCTGCATTGCTGCCAATAAGGGGACTTCTG...AGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTACTGGCTACAGGAATaGCCGAAGACTGCCCATCAT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLYWLQE*PKTAHH
Trigger: ATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCTGCAAACTCCATACTaGCTACAGGAATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLLQTPY*LQEWPK
Trigger: CTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp TGCAAACTCCATACTGGCTACAGGAATGGCCGAAGACTGCCCATCATTATAAACCCTTTGTCTGATCCTTaGTCCTGCTCATTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: CKLHTGYRNGRRLPIIINPLSDP*SCSFEE
Trigger: CTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGG...GTTTATAATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAGACTGCCAGCAAGATaGCCTCAGGGGGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKRLPAR*PQGAPL
Trigger: AAGAGGTGCCCCCTGAGGCCATCTTGCTGGCAGTCT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAAGCCGGCATTTGGATaGGCTGGATCGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKKPAFG*AGSGGQ
Trigger: CTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGTGAAAGCCGGCATTTaGATGGGCTGGATCGGGTGG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKVKAGI*MGWIGW
Trigger: CCACCCGATCCAGCCCATCCAAATGCCGGCTTTCAC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCACAGCTGAGTGGACCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLTAEWT*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGGTCCACTCAGCTGT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTTCTGTCGAGAGAGATaGGGGCTTCTGCAGCATATA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLFCRER*GLLQHI
Trigger: TATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCTAAGGAGACATCAGTaGCATTCTCCGGGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLLRRHQ*HSPGSS
Trigger: ACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp CAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAGCAACTCATCTAAGGAGACATCAGTaGCATTCTCCGGGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QEAFQCEEAEFHSYTATHLRRHQ*HSPGSS
Trigger: ACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAG...ATGAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCAGTCCTGGCAGAGTTaGCGGAACTGGGGTAGCACT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSQSWQS*RNWGST
Trigger: AGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp AGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAGCAACTCATCTGTAAGGCCAGCTaGGTATTACCATTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SKRPSNVKKLNSTVIQQLICKAS*VLPFCS
Trigger: ACTGCAGAATGGTAATACTCAGCTGGCCTTACAGAT...GAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCACTGCAGGGAGCAGCTaGTTCCTTTTGATGATCTGT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLTAGSS*FLLMIC
Trigger: ACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCCTAATGAACATGGCTaGCCTTCTATGCGTACAGAG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLPNEHG*PSMRTE
Trigger: CTCTGTACGCATAGAAGGTCAGCCATGTTCATTAGG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR GCA 90 bp TTTTTACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTTCCCAAATTGTGCTTaGTCATGGCAAAATGGATGC +
Preference number: 4 (lower is better)
Translates to: FLPGSVLPALSCAQTLSFFPNCA*SWQNGC
Trigger: GCATCCATTTTGCCATGAGCAAGCACAATTTGGGAA...GAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCACCTGCACTGAGCTGTaGACAGACATTGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLTCTEL*TDIVIL
Trigger: GAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTTATTCCAGAACATGCAACCTGCACTGAGCTGTaGACAGACATTGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: IVLAHGKMDATKVIPEHATCTEL*TDIVIL
Trigger: GAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGT...TGCATGTTCTGGAATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCCAGAGGCGAGGATTTaGATGATAAACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLPEARI*MINLNS
Trigger: GCTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTCCTGCTTTGGATCTTaGTGTTCTTCAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLSCFGS*CSSGSS
Trigger: GCTGCTACCTGAAGAACAGCAAGATCCAAAGCAGGA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTTTCACTGCTTTCGCTaGTCTCTGTGTTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLFHCFR*SLCSHL
Trigger: TAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTGCTGCAAGTTTCACTaGTTTCGCTGCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLCCKFH*FRCSLC
Trigger: ACACAGAGAGCAGCGAAAGCAGTGAAACTTGCAGCA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp CCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGCACTCATATCTCTTATTaGTTAGTAACGTACACATGG +
Preference number: 4 (lower is better)
Translates to: PGSVLPALSCAQTLSFSCTHISY*LVTYTW
Trigger: CCATGTGTACGTTACTAACCAATAAGAGATATGAGT...GCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCAGAAGTCCCCTTATTaGCAGCAATGCAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLQKSPY*QQCSIQ
Trigger: CTGAATGCTGCATTGCTGCCAATAAGGGGACTTCTG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp AGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAGCAACTCGAGATCCTGACAGCTTaGGCTGCTGAAGAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SKRPSNVKKLNSTVIQQLEILTA*AAEEVY
Trigger: ATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTC...GAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAGACTGCCAGCAAGATaGCCTCAGGGGGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSRLPAR*PQGAPL
Trigger: AAGAGGTGCCCCCTGAGGCCATCTTGCTGGCAGTCT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAAGCCGGCATTTGGATaGGCTGGATCGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSKPAFG*AGSGGQ
Trigger: CTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATGTTTCTCTGCTCCCTaGTCTGCAGGCTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKCFSAP*SAGLSA
Trigger: TGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAACA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCATTTCTTCAACAGCTaGGTGGACCTGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLHFFNS*VDLILQ
Trigger: CTGAAGAATCAGGTCCACTCAGCTGTTGAAGAAATG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACAGTGCTACCTGCACTaGGCTGTGCACAGACATTGT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKQCYLH*AVHRHC
Trigger: ACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAAGGTGGAGCTGGAATaGATTTATCTCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLKVELE*IYLHHG
Trigger: GCCATGATGGAGATAAATTCATTCCAGCTCCACCTT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCATGATTCAAAGCCATaGGGTTATCACCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLHDSKP*GYHPKP
Trigger: TGGCTTTGGGTGATAACCTCATGGCTTTGAATCATG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAAGCGCTGCCAAGGTTaGACAGCATCACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSKRCQG*TASQSW
Trigger: CCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCATCTGTAAGGCCAGCTaGGTATTACCATTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLICKAS*VLPFCS
Trigger: ACTGCAGAATGGTAATACTCAGCTGGCCTTACAGAT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCTGCACAGTGGTaGAAGCCGGCATTTGGATGG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFSAQW*KPAFGW
Trigger: CCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAGGACAGCAAGAAGATaGAAAGCTTTCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLRTARR*KAFSAW
Trigger: CCAAGCTGAGAAAGCTTTGCATCTTCTTGCTGTCCT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp TTTTTACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCATGGCAAAATGGATaGAACCAAGGTTATTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLPGSVLPALSCAQTLSFSWQNG*NQGYSR
Trigger: TCTGGAATAACCTTGGTTGCATCCATTTTGCCATGA...GAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTCTGAGACATATGGCTaGAAACTCCATACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLSETYG*KLHTGY
Trigger: GTAGCCAGTATGGAGTTTGCAGCCATATGTCTCAGA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATTTAGCCCCATTTTCCTaGTTTGGATCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IRRQQEAFQCEEAEFHSYLAPFS*FGSCCS
Trigger: AGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAA...ATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCATGGCTTTTACTGCTaGAAGTTTCACTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLHGFYC*KFHCFR
Trigger: GCGAAAGCAGTGAAACTTGCAGCAGTAAAAGCCATG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGAGCCACGTAGGCACTaGAAGCAAGTATGGAGCACT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKEPRRH*KQVWST
Trigger: AGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGAGCCACGTAGGCACTaGAAGCAAGTATGGAGCACC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSEPRRH*KQVWST
Trigger: GGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331889.10
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGAGATCCTGACAGCTTaGGCTGCTGAAGAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLEILTA*AAEEVY
Trigger: ATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAATTGAAGCCGCCTGGTaGAGACACTTTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKIEAAW*RHFRAL
Trigger: CAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAAT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAATCATTGAAGCCGCCTaGTGGAGACACTTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKIIEAA*WRHFRA
Trigger: AGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGAT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGGCACCTCTTTAGGATaGATCATTGAAGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKGTSLG*IIEAAW
Trigger: CCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGACAGGCTGAAACACTaGCTTCTTTCTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLDRLKH*LLSHFR
Trigger: TCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTGTTTCTCTGCTCCCTaGTCTGCAGGCTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSCFSAP*SAGLSA
Trigger: TGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAACA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328834.9
ENST00000331889.10
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGTGATCCCAGAGGACTaGCCTGTGCCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSVIPED*PVPSCF
Trigger: GAAACATGAAGGCACAGGTCAGTCCTCTGGGATCAC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTTCTCTTGATCAGTaGTCCCAGAGGACTGACCTG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSPSLDQ*SQRTDL
Trigger: CAGGTCAGTCCTCTGGGATCACTGATCAAGAGAAGG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCATTCACCTGTTTTCATaGATCCTGGATGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLIHLFS*ILDAQQ
Trigger: TTGCTGAGCATCCAGGATTCATGAAAACAGGTGAAT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCAGTGCTACCTGCACTaGGCTGTGCACAGACATTGT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSQCYLH*AVHRHC
Trigger: ACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCATTTTCACCTTTGTCTaGTCCTTGGTCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLIFTFV*SLVLLI
Trigger: AATGAGCAGGACCAAGGATCAGACAAAGGTGAAAAT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTTAGGATGGATCATTaGAGCCGCCTGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFRMDH*SRLVET
Trigger: TGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTCTCTGCACAGTGGTaGAAGCCGGCATTTGGATGG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSFSAQW*KPAFGW
Trigger: CCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGCGTACAGAGCTCTTTaGCCCACAAACCTTGACAGT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKAYRAL*PTNLDS
Trigger: ACTGTCAAGGTTTGTGGGTCAAAGAGCTCTGTACGC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATGTTTCTCTGCTCCCTaGTCAGACAGAGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKCFSAP*SDRVCT
Trigger: TGTGCAGACTCTGTCTGATCAGGGAGCAGAGAAACA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACAGAGGACTGACCTGTaGCTTCATGTTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKQRTDL*LHVSLL
Trigger: GAGCAGAGAAACATGAAGGCACAGGTCAGTCCTCTG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAAGAAAGAGAGAGGGTaGGGAATTTCCAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLKKERG*GISSCI
Trigger: AATACAGCTGGAAATTCCGCACCCTCTCTCTTTCTT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGGTTATTCCAGAACATaGATCTCAAGCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLGYSRT*ISSIHL
Trigger: CAGGTGAATGCTTGAGATGCATGTTCTGGAATAACC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTTCCCAAATTGTGCTTaGTCATGGCAAAATGGATGC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLFPNCA*SWQNGC
Trigger: GCATCCATTTTGCCATGAGCAAGCACAATTTGGGAA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp CGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAAATATTCCCAAATTGTaGTTGCTCATGGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: RRQQEAFQCEEAEFHSYTNIPKL*LLMAKW
Trigger: CCATTTTGCCATGAGCAAGCACAATTTGGGAATATT...TGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR GCA 90 bp AATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTTATTCCCAGAGGCGAGGATTTaGATGATAAACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: NIPKLCLLMAKWMQPRLFPEARI*MINLNS
Trigger: GCTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGG...GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTTAGCCCCATTTTCCTaGTTTGGATCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLLAPFS*FGSCCS
Trigger: AGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCCAGATGTGAAAGCTTaGAAAGCATTGGTGGATAAC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLPDVKA*KALVDN
Trigger: GTTATCCACCAATGCTTTCCAAGCTTTCACATCTGG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTTTCACCAACTGATATaGCTTCTGTATACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLFHQLI*LLYTAA
Trigger: TGCGGCAGTATACAGAAGCCATATCAGTTGGTGAAA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp CAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAGCAACTCATTTTCACCAACTGATATaGCTTCTGTATACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: QEAFQCEEAEFHSYTATHFHQLI*LLYTAA
Trigger: TGCGGCAGTATACAGAAGCCATATCAGTTGGTGAAA...ATGAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATACTGGCTACAGGAATaGCCGAAGACTGCCCATCAT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKYWLQE*PKTAHH
Trigger: ATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACTGCAAACTCCATACTaGCTACAGGAATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKLQTPY*LQEWPK
Trigger: CTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCATTGAAGCCGCCTGGTaGAGACACTTTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSIEAAW*RHFRAL
Trigger: CAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAAT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCATCATTGAAGCCGCCTaGTGGAGACACTTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSIIEAA*WRHFRA
Trigger: AGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGAT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGGCACCTCTTTAGGATaGATCATTGAAGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSGTSLG*IIEAAW
Trigger: CCAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGATAACTCCTTCTCTTaGTCAGTGATCCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKDNSFS*SVIPED
Trigger: GTCCTCTGGGATCACTGATCAAGAGAAGGAGTTATC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAACAGCTGAGTGGACCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKTAEWT*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGGTCCACTCAGCTGT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTGTCGAGAGAGATaGGGGCTTCTGCAGCATATA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFCRER*GLLQHI
Trigger: TATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTTAGGATGGATCATTaGAGCCGCCTGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSFRMDH*SRLVET
Trigger: TGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAACTGCAGGGAGCAGCTaGTTCCTTTTGATGATCTGT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKTAGSS*FLLMIC
Trigger: ACAGATCATCAAAAGGAATCAGCTGCTCCCTGCAGT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGTCTCCGTTGCCAATTaGAAGAGTATACGACCGTTC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKVSVAN*KSIRPF
Trigger: GAACGGTCGTATACTCTTTCAATTGGCAACGGAGAC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTCATGGCAAAATGGATaGAACCAAGGTTATTCCAGA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLSWQNG*NQGYSR
Trigger: TCTGGAATAACCTTGGTTGCATCCATTTTGCCATGA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACCAGAGGCGAGGATTTaGATGATAAACCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKPEARI*MINLNS
Trigger: GCTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTTATTGGCAGCAATaGAGCATTCAGCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSPYWQQ*SIQPAV
Trigger: TACGGCTGGCTGAATGCTGCATTGCTGCCAATAAGG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATCCTGCTTTGGATCTTaGTGTTCTTCAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKSCFGS*CSSGSS
Trigger: GCTGCTACCTGAAGAACAGCAAGATCCAAAGCAGGA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTTCACTGCTTTCGCTaGTCTCTGTGTTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFHCFR*SLCSHL
Trigger: TAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATGCTGCAAGTTTCACTaGTTTCGCTGCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKCCKFH*FRCSLC
Trigger: ACACAGAGAGCAGCGAAAGCAGTGAAACTTGCAGCA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCACCAGAGGATTCCATTaGTTCATTTTCACCTTTGTC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLTRGFH*FIFTFV
Trigger: GACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTTGCTCATGGCAAAATaGATGCAACCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLLLMAK*MQPRLF
Trigger: GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAATTGTGCTTGCTCATaGCAAAATGGATGCAACCAA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLNCACS*QNGCNQ
Trigger: TTGGTTGCATCCATTTTGCCATGAGCAAGCACAATT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp CGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAACTCATATCTCTTATTaGTTAGTAACGTACACATGG +
Preference number: 4 (lower is better)
Translates to: RRQQEAFQCEEAEFHSYTTHISY*LVTYTW
Trigger: CCATGTGTACGTTACTAACCAATAAGAGATATGAGT...TGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCTGCAAACTCCATACTaGCTACAGGAATGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSLQTPY*LQEWPK
Trigger: CTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAGAAGAAGGTGGAGCTaGAATGAATTTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLRRRWS*NEFISI
Trigger: GATGGAGATAAATTCATTCCAGCTCCACCTTCTTCT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGTGATACAACTAAAATaGCCAGTAAATTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLVIQLK*PVNSPL
Trigger: CAGGGGAGAATTTACTGGCCATTTTAGTTGTATCAC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGATAACTCCTTCTCTTaGTCAGTGATCCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSDNSFS*SVIPED
Trigger: GTCCTCTGGGATCACTGATCAAGAGAAGGAGTTATC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCACAGCTGAGTGGACCTaGTTCTTCAGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSTAEWT*FFSWLS
Trigger: ACTTAACCAGCTGAAGAATCAGGTCCACTCAGCTGT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACATTTCTTCAACAGCTaGGTGGACCTGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKHFFNS*VDLILQ
Trigger: CTGAAGAATCAGGTCCACTCAGCTGTTGAAGAAATG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp AATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTTATTCATTCACCTGTTTTCATaGATCCTGGATGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: NIPKLCLLMAKWMQPRLFIHLFS*ILDAQQ
Trigger: TTGCTGAGCATCCAGGATTCATGAAAACAGGTGAAT...GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455381.5
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAAGGTGGAGCTGGAATaGATTTATCTCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKKVELE*IYLHHG
Trigger: GCCATGATGGAGATAAATTCATTCCAGCTCCACCTT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACATGATTCAAAGCCATaGGGTTATCACCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKHDSKP*GYHPKP
Trigger: TGGCTTTGGGTGATAACCTCATGGCTTTGAATCATG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAGAAGTTTATCTGCATaGTTCAAAGCCATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLRSLSA*FKAMRL
Trigger: TAACCTCATGGCTTTGAATCATGCAGATAAACTTCT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAAACTTAAGAGATCCTaGCAGCTTGGGCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSKLKRS*QLGLLK
Trigger: CTTCAGCAGCCCAAGCTGTCAGGATCTCTTAAGTTT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTCTGTCGAGAGAGATaGGGGCTTCTGCAGCATATA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSFCRER*GLLQHI
Trigger: TATATGCTGCAGAAGCCCTCATCTCTCTCGACAGAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp AAAGTAGAATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGTTCTCCGGGTTCAAGTaGGTAATGGCATCAGATATT +
Preference number: 4 (lower is better)
Translates to: KVEYSQIVLAHGKMDATKFSGFK*VMASDI
Trigger: AATATCTGATGCCATTACTCACTTGAACCCGGAGAA...CTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCTAAGGAGACATCAGTaGCATTCTCCGGGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSLRRHQ*HSPGSS
Trigger: ACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAATCTGTAAGGCCAGCTaGGTATTACCATTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKICKAS*VLPFCS
Trigger: ACTGCAGAATGGTAATACTCAGCTGGCCTTACAGAT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAGGACAGCAAGAAGATaGAAAGCTTTCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKRTARR*KAFSAW
Trigger: CCAAGCTGAGAAAGCTTTGCATCTTCTTGCTGTCCT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp AAAGTAGAATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGAAGAAAGAGAGAGGGTaGGGAATTTCCAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: KVEYSQIVLAHGKMDATKKKERG*GISSCI
Trigger: AATACAGCTGGAAATTCCGCACCCTCTCTCTTTCTT...CTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455381.5
CDS-3UTR GCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAATATTCCCAAATTGTaGTTGCTCATGGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLNIPKL*LLMAKW
Trigger: CCATTTTGCCATGAGCAAGCACAATTTGGGAATATT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCACCTGCACTGAGCTGTaGACAGACATTGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSTCTEL*TDIVIL
Trigger: GAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTCCTGCTTTGGATCTTaGTGTTCTTCAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSSCFGS*CSSGSS
Trigger: GCTGCTACCTGAAGAACAGCAAGATCCAAAGCAGGA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATCTGATCCTTGGTCCTaGTCATTTGAAGAGATCCCT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKSDPWS*SFEEIP
Trigger: AGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCAAGTATGGAGCACCTaGAAGTTTCACTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSQVWST*KFHCFR
Trigger: GCGAAAGCAGTGAAACTTGCAGGTGCTCCATACTTG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331889.10
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCATGGCTGACCTTCTATaGGTACAGAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSMADLL*VQSSLT
Trigger: GGTCAAAGAGCTCTGTACGCATAGAAGGTCAGCCAT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGCCTTCATGTTTCTCTaGTCCCTGATCAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSAFMFL*SLIRQS
Trigger: ACTCTGTCTGATCAGGGAGCAGAGAAACATGAAGGC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCCTGTTTTCTCAATaGAGAAGAAGGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFLFSQ*RRRWSW
Trigger: CCAGCTCCACCTTCTTCTCCATTGAGAAAACAGGAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCACTGCAAGCAAGTATaGAGCACTTTAAGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLHCKQV*STLSFL
Trigger: TAGAAAACTTAAAGTGCTCCATACTTGCTTGCAGTG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACCTTTGTCTGATCCTTaGTCCTGCTCATTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKPLSDP*SCSFEE
Trigger: CTCTTCAAATGAGCAGGACCAAGGATCAGACAAAGG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGACAGGCTGAAACACTaGCTTCTTTCTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKDRLKH*LLSHFR
Trigger: TCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCACTGCAAGCAAGTATaGAGCACCTGCAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSHCKQV*STCKFH
Trigger: GTGAAACTTGCAGGTGCTCCATACTTGCTTGCAGTG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331889.10
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCATTTCTTCAACAGCTaGGTGGACCTGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSHFFNS*VDLILQ
Trigger: CTGAAGAATCAGGTCCACTCAGCTGTTGAAGAAATG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAATTTTCACCTTTGTCTaGTCCTTGGTCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKIFTFV*SLVLLI
Trigger: AATGAGCAGGACCAAGGATCAGACAAAGGTGAAAAT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCATCTGTAAGGCCAGCTaGGTATTACCATTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSICKAS*VLPFCS
Trigger: ACTGCAGAATGGTAATACTCAGCTGGCCTTACAGAT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAGGACAGCAAGAAGATaGAAAGCTTTCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSRTARR*KAFSAW
Trigger: CCAAGCTGAGAAAGCTTTGCATCTTCTTGCTGTCCT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGGTTATTCCAGAACATaGATCTCAAGCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKGYSRT*ISSIHL
Trigger: CAGGTGAATGCTTGAGATGCATGTTCTGGAATAACC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCCCAAATTGTGCTTaGTCATGGCAAAATGGATGC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFPNCA*SWQNGC
Trigger: GCATCCATTTTGCCATGAGCAAGCACAATTTGGGAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTCTGAGACATATGGCTaGAAACTCCATACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSSETYG*KLHTGY
Trigger: GTAGCCAGTATGGAGTTTGCAGCCATATGTCTCAGA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTAGCCCCATTTTCCTaGTTTGGATCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKLAPFS*FGSCCS
Trigger: AGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCATGGCTTTTACTGCTaGAAGTTTCACTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSHGFYC*KFHCFR
Trigger: GCGAAAGCAGTGAAACTTGCAGCAGTAAAAGCCATG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTCTGATCCTTGGTCCTaGTCATTTGAAGAGATCCCT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSSDPWS*SFEEIP
Trigger: AGGGATCTCTTCAAATGAGCAGGACCAAGGATCAGA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTTCACCAACTGATATaGCTTCTGTATACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFHQLI*LLYTAA
Trigger: TGCGGCAGTATACAGAAGCCATATCAGTTGGTGAAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCACTCATATCTCTTATTaGTTAGTAACGTACACATGG +
Preference number: 4 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLTHISY*LVTYTW
Trigger: CCATGTGTACGTTACTAACCAATAAGAGATATGAGT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGAGATCCTGACAGCTTaGGCTGCTGAAGAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSEILTA*AAEEVY
Trigger: ATAAACTTCTTCAGCAGCCCAAGCTGTCAGGATCTC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp AGAATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTTATGTGATACAACTAAAATaGCCAGTAAATTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RIFPNCACSWQNGCNQGYVIQLK*PVNSPL
Trigger: CAGGGGAGAATTTACTGGCCATTTTAGTTGTATCAC...ATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCATTCACCTGTTTTCATaGATCCTGGATGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSIHLFS*ILDAQQ
Trigger: TTGCTGAGCATCCAGGATTCATGAAAACAGGTGAAT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTCTCCGGGTTCAAGTaGGTAATGGCATCAGATATT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSFSGFK*VMASDI
Trigger: AATATCTGATGCCATTACTCACTTGAACCCGGAGAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAAGAAAGAGAGAGGGTaGGGAATTTCCAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSKKERG*GISSCI
Trigger: AATACAGCTGGAAATTCCGCACCCTCTCTCTTTCTT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGGTTATTCCAGAACATaGATCTCAAGCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSGYSRT*ISSIHL
Trigger: CAGGTGAATGCTTGAGATGCATGTTCTGGAATAACC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATCATGGCAAAATGGATaGAACCAAGGTTATTCCAGA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKSWQNG*NQGYSR
Trigger: TCTGGAATAACCTTGGTTGCATCCATTTTGCCATGA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTCCCAAATTGTGCTTaGTCATGGCAAAATGGATGC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSFPNCA*SWQNGC
Trigger: GCATCCATTTTGCCATGAGCAAGCACAATTTGGGAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTAGCCCCATTTTCCTaGTTTGGATCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSLAPFS*FGSCCS
Trigger: AGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACATCATGGCTTTTACTaGTGCAAGTTTCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKHHGFY*CKFHCF
Trigger: AAAGCAGTGAAACTTGCAGCAGTAAAAGCCATGATG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAACCAGAGGATTCCATTaGTTCATTTTCACCTTTGTC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKTRGFH*FIFTFV
Trigger: GACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAAGCTTGGAAAGCATTaGTGGATAACTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKKLGKH*WITPSL
Trigger: AAGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTTCACCAACTGATATaGCTTCTGTATACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSFHQLI*LLYTAA
Trigger: TGCGGCAGTATACAGAAGCCATATCAGTTGGTGAAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTGCTCATGGCAAAATaGATGCAACCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKLLMAK*MQPRLF
Trigger: GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAATTGTGCTTGCTCATaGCAAAATGGATGCAACCAA +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKNCACS*QNGCNQ
Trigger: TTGGTTGCATCCATTTTGCCATGAGCAAGCACAATT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTCATGGCAAAATGGATaGAACCAAGGTTATTCCAGA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSSWQNG*NQGYSR
Trigger: TCTGGAATAACCTTGGTTGCATCCATTTTGCCATGA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCATCATGGCTTTTACTaGTGCAAGTTTCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSHHGFY*CKFHCF
Trigger: AAAGCAGTGAAACTTGCAGCAGTAAAAGCCATGATG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCACCAGAGGATTCCATTaGTTCATTTTCACCTTTGTC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSTRGFH*FIFTFV
Trigger: GACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAAAAGTAGTCTCCGTTaGCAATTGAAAGAGTATACG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKKSSLR*QLKEYT
Trigger: CGTATACTCTTTCAATTGGCAACGGAGACTACTTTT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAAGCTTGGAAAGCATTaGTGGATAACTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSKLGKH*WITPSL
Trigger: AAGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTGCTCATGGCAAAATaGATGCAACCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSLLMAK*MQPRLF
Trigger: GAATAACCTTGGTTGCATCCATTTTGCCATGAGCAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAGAAGAAGGTGGAGCTaGAATGAATTTATCTCCATC +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSRRRWS*NEFISI
Trigger: GATGGAGATAAATTCATTCCAGCTCCACCTTCTTCT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGTGATACAACTAAAATaGCCAGTAAATTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSVIQLK*PVNSPL
Trigger: CAGGGGAGAATTTACTGGCCATTTTAGTTGTATCAC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR TCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAGAAGTTTATCTGCATaGTTCAAAGCCATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSRSLSA*FKAMRL
Trigger: TAACCTCATGGCTTTGAATCATGCAGATAAACTTCT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAATATTCCCAAATTGTaGTTGCTCATGGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSNIPKL*LLMAKW
Trigger: CCATTTTGCCATGAGCAAGCACAATTTGGGAATATT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR GCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCAGCATTTCTTTATTTaGCCAAAAGTAGTCTCCGTT +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSQHFFI*PKVVSV
Trigger: AACGGAGACTACTTTTGGGCAAATAAAGAAATGCTG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR CCA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAACTCATATCTCTTATTaGTTAGTAACGTACACATGG +
Preference number: 4 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKTHISY*LVTYTW
Trigger: CCATGTGTACGTTACTAACCAATAAGAGATATGAGT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CCA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCACTGCAAGCAAGTATaGAGCACTTTAAGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSHCKQV*STLSFL
Trigger: TAGAAAACTTAAAGTGCTCCATACTTGCTTGCAGTG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000416457.5
ENST00000454516.7
CDS GCA 90 bp CGCCGCCGGGCTGGCCGCTGTCCTGGACCTCCGAGGACAACTCTGTaGCTACCCCGGCTCCGGGCCCCCAGGTTCCGGCTAGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: RRRAGRCPGPPRTTL*LPRLRAPRFRLEEW
Trigger: CCACTCCTCTAGCCGGAACCTGGGGGCCCGGAGCCGGGGTAGGCACAGAGTTGTCCTCGGAGGTCCAGGACAGCGGCCAGCCCGGCGGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000435630.5
ENST00000494439.5
ENST00000556853.5
CDS TCA 90 bp TCTTCCCGCTTCGACTCGGGTTCTTCCCTGCAGGTGGCGTGGCCCTaGCTCCCGCCGCCGGGCTGGCCGCTGTCCTGGACCTCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: SSRFDSGSSLQVAWP*LPPPGWPLSWTSED
Trigger: GTCCTCGGAGGTCCAGGACAGCGGCCAGCCCGGCGGCGGGAGTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGTCGAAGCGGGAAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000435630.5
ENST00000494439.5
ENST00000556853.5
CDS GCA 90 bp AGGCTTGTCTGCAGCCATCTTCCCGCTTCGACTCGGGTTCTTCCCTaGAGGTGGCGTGGCCCTGACTCCCGCCGCCGGGCTGGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: RLVCSHLPASTRVLP*RWRGPDSRRRAGRC
Trigger: ACAGCGGCCAGCCCGGCGGCGGGAGTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGTCGAAGCGGGAAGATGGCTGCAGACAAGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000435630.5
ENST00000494439.5
ENST00000556853.5
CDS-3UTR CAA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACGGTGAAAGCCGGCATTaGGATGGGCTGGATCGGGTG +
Preference number: 5 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDGESRH*DGLDRV
Trigger: CACCCGATCCAGCCCATCCAAATGCCGGCTTTCACC...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAGCTGTGCACAGACATaGTCATTCTCTTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLSCAQT*SFSCRA
Trigger: GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCT...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAGGCTGTCAGAAGTCCCCTTATaGGCAGCAATGCAGCATTCA +
Preference number: 5 (lower is better)
Translates to: LHSGESRHLDGLDRVDRLSEVPL*AAMQHS
Trigger: TGAATGCTGCATTGCTGCCAATAAGGGGACTTCTGA...CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp TCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGCAGAGCCGGTGAAAGCCGGCATTaGGATGGGCTGGATCGGGTG +
Preference number: 5 (lower is better)
Translates to: SVLPALSCAQTLSFSCRAGESRH*DGLDRV
Trigger: CACCCGATCCAGCCCATCCAAATGCCGGCTTTCACC...GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACGCCAGAGGCGAGGATTaGCATGATAAACCTGAACAG +
Preference number: 5 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDARGED*HDKPEQ
Trigger: CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGC...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp GCCAGCAAGATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTGAAGCCGCCTCAGAAGTCCCCTTATaGGCAGCAATGCAGCATTCA +
Preference number: 5 (lower is better)
Translates to: ASKMASGGTSLGWIIEAASEVPL*AAMQHS
Trigger: TGAATGCTGCATTGCTGCCAATAAGGGGACTTCTGA...GGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATCTTGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS TCA 90 bp GAAGAGGCCGTGCCAACAGCAAGGAAGCAACCCAATCTATCGCCTTaGGGAGCCACTTGGCACAGCAGTATTCCTCAGGCAGAAAAACGA +
Preference number: 5 (lower is better)
Translates to: EEAVPTARKQPNLSP*GATWHSSIPQAEKR
Trigger: TCGTTTTTCTGCCTGAGGAATACTGCTGTGCCAAGTGGCTCCTCAAGGCGATAGATTGGGTTGCTTCCTTGCTGTTGGCACGGCCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468599.1
ENST00000481526.5
CDS-3UTR CAA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGGCTTCATTTTCACCTTaGTCTGATCCTTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVASFSP*SDPWSC
Trigger: GCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGC...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCAAGACACTTTCGGGCTTaGTCATATTCGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: AFGWAGSGGQAETLASFSRHFRA*SYSLLR
Trigger: CCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCT...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CAATGCAGCATTCAGCCAGCCGTAGCCAGAGGCGAGGATTTGCATGATAAACCTGCCAGAGGCGAGGATTaGCATGATAAACCTGAACAG +
Preference number: 5 (lower is better)
Translates to: QCSIQPAVARGEDLHDKPARGED*HDKPEQ
Trigger: CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGC...AGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGAATGCTGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CAA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACCCCATTTTCCTGCTTaGGATCTTGCTGTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: AFGWAGSGGQAETLASFSPHFPA*DLAVLQ
Trigger: CTGAAGAACAGCAAGATCCAAAGCAGGAAAATGGGG...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACAAGGCCTTTAGTTTCTaGTTCAGAAGTCCCCTTATT +
Preference number: 5 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDKAFSF*FRSPLI
Trigger: AATAAGGGGACTTCTGAACAAGAAACTAAAGGCCTT...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CTTTCTCTGCACAGTGGTGAAAGCCGGCATTTGGATGGGCTGGATCGGGTGGACTTTACGATGATAGCCTaGACCAACAATAGACTGTAC +
Preference number: 5 (lower is better)
Translates to: LSLHSGESRHLDGLDRVDFTMIA*TNNRLY
Trigger: GTACAGTCTATTGTTGGTCAAGGCTATCATCGTAAA...GTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCTTGGTCCTGCTCATTaGAAGAGATCCCTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: FGWAGSGGQAETLASFSLLGPAH*KRSLRR
Trigger: TCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAG...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CTTTCGGGCTTTGTCATATTCGCTCCTCAGGCAGTAAGCGCTGCCAAGGTTGAAGCTTCATTTTCACCTTaGTCTGATCCTTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LSGFVIFAPQAVSAAKVEASFSP*SDPWSC
Trigger: GCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGC...TTCAACCTTGGCAGCGCTTACTGCCTGAGGAGCGAATATGACAAAGCCCGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGGTGAAAGCCGGCATTaGGATGGGCTGGATCGGGTG +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLGESRH*DGLDRV
Trigger: CACCCGATCCAGCCCATCCAAATGCCGGCTTTCACC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS TCA 90 bp TCCAGTCCTGAAGAAGGAAGCCTGGACTGCTCTGGACAGAAGTGCTaGAATTACAGGTTTATTTCCTCAGTCTGGGCCTCTTTGAGCTAC +
Preference number: 5 (lower is better)
Translates to: SSPEEGSLDCSGQKC*NYRFISSVWASLSY
Trigger: GTAGCTCAAAGAGGCCCAGACTGAGGAAATAAACCTGTAATTTCAGCACTTCTGTCCAGAGCAGTCCAGGCTTCCTTCTTCAGGACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473064.1
CDS-3UTR CAA 90 bp GCATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCAAAAGCTTGGAAAGCATaGGTGGATAACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: AFGWAGSGGQAETLASFSKAWKA*VDNSFS
Trigger: AGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTTT...TGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435630.5
CDS TCA 90 bp CTGCCAACCAACAAGGTAACAAACTTATTCAAGCTCATTCCCACGTaGCTTCCTAGGGACTACCTGTTGTTCTGCTCTGATGAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LPTNKVTNLFKLIPT*LPRDYLLFCSDEPQ
Trigger: CTGAGGCTCATCAGAGCAGAACAACAGGTAGTCCCTAGGAAGTCACGTGGGAATGAGCTTGAATAAGTTTGTTACCTTGTTGGTTGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476967.1
CDS CCA 90 bp ATCGGCCAGCAGTTTCTCTCTGATCCAGTCCTGAAGAAGGAAGCCTaGACTGCTCTGGACAGAAGTGCTGAAATTACAGGTTTATTTCCT +
Preference number: 5 (lower is better)
Translates to: IGQQFLSDPVLKKEA*TALDRSAEITGLFP
Trigger: AGGAAATAAACCTGTAATTTCAGCACTTCTGTCCAGAGCAGTCCAGGCTTCCTTCTTCAGGACTGGATCAGAGAGAAACTGCTGGCCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473064.1
CDS-3UTR CAA 90 bp GGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTCAGAGTGGATCCATCTTTGTTGTaGTTATTACCAGTCTCATTC +
Preference number: 5 (lower is better)
Translates to: GLDRVDRLKHWLLSHFRVDPSLL*LLPVSF
Trigger: GAATGAGACTGGTAATAACAACAACAAAGATGGATC...CACTCTGAAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp GTTATCACCCAAAGCCAGAGCCACGTAGGCACTGCAAGCAAGTATGGAGCACTTATTCCCAAATTGTGCTaGCTCATGGCAAAATGGATG +
Preference number: 5 (lower is better)
Translates to: VITQSQSHVGTASKYGALIPKLC*LMAKWM
Trigger: CATCCATTTTGCCATGAGCAAGCACAATTTGGGAAT...AAGTGCTCCATACTTGCTTGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp TTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTATTCCCAAATTGTGCTaGCTCATGGCAAAATGGATG +
Preference number: 5 (lower is better)
Translates to: FGWAGSGGQAETLASFSLIPKLC*LMAKWM
Trigger: CATCCATTTTGCCATGAGCAAGCACAATTTGGGAAT...AAGTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp TTTTTACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCAGCTGTGCACAGACATaGTCATTCTCTTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: FLPGSVLPALSCAQTLSFSCAQT*SFSCRA
Trigger: GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCT...GAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CAA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTGTACAATTCCTTTTTaGCTGGGAAGGCCTTTAGTT +
Preference number: 5 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHCTIPF*LGRPLV
Trigger: AACTAAAGGCCTTCCCAGCAAAAAAGGAATTGTACA...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACTTTACGATGATAGCCTaGACCAACAATAGACTGTAC +
Preference number: 5 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHFTMIA*TNNRLY
Trigger: GTACAGTCTATTGTTGGTCAAGGCTATCATCGTAAA...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACGTATTCATGACTGACTaGATTTCCCTTTTACATGCT +
Preference number: 5 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHVFMTD*ISLLHA
Trigger: AGCATGTAAAAGGGAAATCAAGTCAGTCATGAATAC...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp CATTTGGATGGGCTGGATCGGGTGGACAGGCTGAAACACTGGCTTCTTTCTCACGACATTGTCATTCTCTaGCAGAGCCTTTTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: HLDGLDRVDRLKHWLLSHDIVIL*QSLFKV
Trigger: TACTTTAAAAAGGCTCTGCAAGAGAATGACAATGTC...GTGAGAAAGAAGCCAGTGTTTCAGCCTGTCCACCCGATCCAGCCCATCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000435630.5
CDS-3UTR CAA 90 bp ATTCGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATGCCAGAGGCGAGGATTaGCATGATAAACCTGAACAG +
Preference number: 5 (lower is better)
Translates to: IRRQQEAFQCEEAEFHSYARGED*HDKPEQ
Trigger: CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGC...ATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CAA 90 bp TCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGCAGAGCCAAGGCCTTTAGTTTCTaGTTCAGAAGTCCCCTTATT +
Preference number: 5 (lower is better)
Translates to: SVLPALSCAQTLSFSCRAKAFSF*FRSPLI
Trigger: AATAAGGGGACTTCTGAACAAGAAACTAAAGGCCTT...GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp GATGGATCATTGAAGCCGCCTGGTGGAGACACTTTCGGGCTTTGTCATATTCGCTGTACAATTCCTTTTTaGCTGGGAAGGCCTTTAGTT +
Preference number: 5 (lower is better)
Translates to: DGSLKPPGGDTFGLCHIRCTIPF*LGRPLV
Trigger: AACTAAAGGCCTTCCCAGCAAAAAAGGAATTGTACA...GCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp TTTTTACCTGGATCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCCTTGGTCCTGCTCATTaGAAGAGATCCCTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: FLPGSVLPALSCAQTLSFLGPAH*KRSLRR
Trigger: TCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAG...GAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp ATTCGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATAGACACTTTCGGGCTTaGTCATATTCGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: IRRQQEAFQCEEAEFHSYRHFRA*SYSLLR
Trigger: CCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCT...ATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGGTGAAAGCCGGCATTaGGATGGGCTGGATCGGGTG +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKGESRH*DGLDRV
Trigger: CACCCGATCCAGCCCATCCAAATGCCGGCTTTCACC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp TCAGTGCTACCTGCACTGAGCTGTGCACAGACATTGTCATTCTCTTGCAGAGCCGACATTGTCATTCTCTaGCAGAGCCTTTTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: SVLPALSCAQTLSFSCRADIVIL*QSLFKV
Trigger: TACTTTAAAAAGGCTCTGCAAGAGAATGACAATGTC...GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCTCAGTGCAGGTAGCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CAA 90 bp ATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTTATTCCAGAACATGCAAGCTGTGCACAGACATaGTCATTCTCTTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: IVLAHGKMDATKVIPEHASCAQT*SFSCRA
Trigger: GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCT...TGCATGTTCTGGAATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGCCAGAGGCGAGGATTaGCATGATAAACCTGAACAG +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLARGED*HDKPEQ
Trigger: CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCGAAGGCAGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATCCCCATTTTCCTGCTTaGGATCTTGCTGTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: IRRQQEAFQCEEAEFHSYPHFPA*DLAVLQ
Trigger: CTGAAGAACAGCAAGATCCAAAGCAGGAAAATGGGG...ATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTGCCTTCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAGACACTTTCGGGCTTaGTCATATTCGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLRHFRA*SYSLLR
Trigger: CCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGGTGAAAGCCGGCATTaGGATGGGCTGGATCGGGTG +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSGESRH*DGLDRV
Trigger: CACCCGATCCAGCCCATCCAAATGCCGGCTTTCACC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTCAGAAGTCCCCTTATaGGCAGCAATGCAGCATTCA +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLSEVPL*AAMQHS
Trigger: TGAATGCTGCATTGCTGCCAATAAGGGGACTTCTGA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCCCCATTTTCCTGCTTaGGATCTTGCTGTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLPHFPA*DLAVLQ
Trigger: CTGAAGAACAGCAAGATCCAAAGCAGGAAAATGGGG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGCTTCATTTTCACCTTaGTCTGATCCTTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLASFSP*SDPWSC
Trigger: GCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS TCA 90 bp CCACAGCATTTCTTTATTTGCCCAAAAGTAGTCTCCGTTGCCAATTaGAAGAGTATACGACCGTTCACCCATAAGCTTGACTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PQHFFICPKVVSVAN*KSIRPFTHKLDFPS
Trigger: AGAAGGAAAGTCAAGCTTATGGGTGAACGGTCGTATACTCTTTCAATTGGCAACGGAGACTACTTTTGGGCAAATAAAGAAATGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCATTCCCAAATTGTGCTaGCTCATGGCAAAATGGATG +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLIPKLC*LMAKWM
Trigger: CATCCATTTTGCCATGAGCAAGCACAATTTGGGAAT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAGCTGTGCACAGACATaGTCATTCTCTTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKSCAQT*SFSCRA
Trigger: GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAGACACTTTCGGGCTTaGTCATATTCGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKRHFRA*SYSLLR
Trigger: CCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp AGCAAGAGGCCTTCCAATGTGAAGAAGCTGAATTCCACAGTTATACAGCAACTCGACATTGTCATTCTCTaGCAGAGCCTTTTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: SKRPSNVKKLNSTVIQQLDIVIL*QSLFKV
Trigger: TACTTTAAAAAGGCTCTGCAAGAGAATGACAATGTC...GAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAGCTGTGCACAGACATaGTCATTCTCTTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSSCAQT*SFSCRA
Trigger: GGCTCTGCAAGAGAATGACAATGTCTGTGCACAGCT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCGCCAGAGGCGAGGATTaGCATGATAAACCTGAACAG +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSARGED*HDKPEQ
Trigger: CTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGC...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATCAGAAGTCCCCTTATaGGCAGCAATGCAGCATTCA +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKSEVPL*AAMQHS
Trigger: TGAATGCTGCATTGCTGCCAATAAGGGGACTTCTGA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCAAGGCCTTTAGTTTCTaGTTCAGAAGTCCCCTTATT +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLKAFSF*FRSPLI
Trigger: AATAAGGGGACTTCTGAACAAGAAACTAAAGGCCTT...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTGTACAATTCCTTTTTaGCTGGGAAGGCCTTTAGTT +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLCTIPF*LGRPLV
Trigger: AACTAAAGGCCTTCCCAGCAAAAAAGGAATTGTACA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCTTTACGATGATAGCCTaGACCAACAATAGACTGTAC +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLFTMIA*TNNRLY
Trigger: GTACAGTCTATTGTTGGTCAAGGCTATCATCGTAAA...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACTTGGTCCTGCTCATTaGAAGAGATCCCTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKLGPAH*KRSLRR
Trigger: TCTCCTTAGGGATCTCTTCAAATGAGCAGGACCAAG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAGACACTTTCGGGCTTaGTCATATTCGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSRHFRA*SYSLLR
Trigger: CCTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS GCA 90 bp TTCCTCACCTTATTATCAACTTGTACTTCCCCATCTAGTTTTAGTTaGTCATTGCTTCCAGACAGCTCTGCCTCTTCTCTTAATCTAATC +
Preference number: 5 (lower is better)
Translates to: FLTLLSTCTSPSSFS*SLLPDSSASSLNLI
Trigger: GATTAGATTAAGAGAAGAGGCAGAGCTGTCTGGAAGCAATGAGCAACTAAAACTAGATGGGGAAGTACAAGTTGATAATAAGGTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473064.1
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCCAGCTGGTTAAGTGTTaGTCTCAAATTATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLQLVKC*SQIICC
Trigger: ACAACAGATAATTTGAGACAAACACTTAACCAGCTG...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGATCCATCTTTGTTGTaGTTATTACCAGTCTCATTC +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLDPSLL*LLPVSF
Trigger: GAATGAGACTGGTAATAACAACAACAAAGATGGATC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGTATTCATGACTGACTaGATTTCCCTTTTACATGCT +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLVFMTD*ISLLHA
Trigger: AGCATGTAAAAGGGAAATCAAGTCAGTCATGAATAC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp AAAGTAGAATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGATTCCCAAATTGTGCTaGCTCATGGCAAAATGGATG +
Preference number: 5 (lower is better)
Translates to: KVEYSQIVLAHGKMDATKIPKLC*LMAKWM
Trigger: CATCCATTTTGCCATGAGCAAGCACAATTTGGGAAT...CTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CAA 90 bp ATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCTGGGTCTCGACATTGTCATTCTCTaGCAGAGCCTTTTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: IHSAVIQLKWPVNSPLGLDIVIL*QSLFKV
Trigger: TACTTTAAAAAGGCTCTGCAAGAGAATGACAATGTC...GAGACCCAGGGGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCCCCATTTTCCTGCTTaGGATCTTGCTGTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSPHFPA*DLAVLQ
Trigger: CTGAAGAACAGCAAGATCCAAAGCAGGAAAATGGGG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCCGTTCACCCATAAGCTaGACTTTCCTTCTACTCTGG +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSRSPIS*TFLLLW
Trigger: CCAGAGTAGAAGGAAAGTCAAGCTTATGGGTGAACG...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAGTCTCCGTTGCCAATaGAAAGAGTATACGACCGTT +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKSLRCQ*KEYTTV
Trigger: AACGGTCGTATACTCTTTCAATTGGCAACGGAGACT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAAAGCTTGGAAAGCATaGGTGGATAACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKKAWKA*VDNSFS
Trigger: AGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTTT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS TCA 90 bp CACCAACTGATATGGCTTCTGTATACTGCCGCAGATGATAAAGAATaGCTGCTTGATTATAGTACAACATGCTGTTTTCAACATCATCTA +
Preference number: 5 (lower is better)
Translates to: HQLIWLLYTAADDKE*LLDYSTTCCFQHHL
Trigger: TAGATGATGTTGAAAACAGCATGTTGTACTATAATCAAGCAGTCATTCTTTATCATCTGCGGCAGTATACAGAAGCCATATCAGTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000435630.5
ENST00000454516.7
ENST00000455381.5
ENST00000485136.5
ENST00000494439.5
ENST00000556853.5
CDS TCA 90 bp AGAACATGCATCTCAAGCATTCACATTTCCAGCTGTATTCATGACTaGCTTGATTTCCCTTTTACATGCTTTCAGAGACTTCATTTGGAT +
Preference number: 5 (lower is better)
Translates to: RTCISSIHISSCIHD*LDFPFTCFQRLHLD
Trigger: ATCCAAATGAAGTCTCTGAAAGCATGTAAAAGGGAAATCAAGTCAGTCATGAATACAGCTGGAAATGTGAATGCTTGAGATGCATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAAAGCTTGGAAAGCATaGGTGGATAACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSKAWKA*VDNSFS
Trigger: AGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTTT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000454516.7
CDS-3UTR CAA 90 bp AGAATATTCCCAAATTGTGCTTGCTCATGGCAAAATGGATGCAACCAAGGTTATGTATTCATGACTGACTaGATTTCCCTTTTACATGCT +
Preference number: 5 (lower is better)
Translates to: RIFPNCACSWQNGCNQGYVFMTD*ISLLHA
Trigger: AGCATGTAAAAGGGAAATCAAGTCAGTCATGAATAC...ATAACCTTGGTTGCATCCATTTTGCCATGAGCAAGCACAATTTGGGAATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416457.5
ENST00000455381.5
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAAAGGCCTTTAGTTTCTaGTTCAGAAGTCCCCTTATT +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKKAFSF*FRSPLI
Trigger: AATAAGGGGACTTCTGAACAAGAAACTAAAGGCCTT...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTTACGATGATAGCCTaGACCAACAATAGACTGTAC +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKFTMIA*TNNRLY
Trigger: GTACAGTCTATTGTTGGTCAAGGCTATCATCGTAAA...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp AATCCTGGATGCTCAGCAATGTTTGAACTATTTAATAGCTTCACGGCTTTTCGAGATCCATCTTTGTTGTaGTTATTACCAGTCAAAAGG +
Preference number: 5 (lower is better)
Translates to: NPGCSAMFELFNSFTAFRDPSLL*LLPVKR
Trigger: CCTTTTGACTGGTAATAACAACAACAAAGATGGATC...TCGAAAAGCCGTGAAGCTATTAAATAGTTCAAACATTGCTGAGCATCCAGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455381.5
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAACAGCTGGTTAAGTGTTaGTCTCAAATTATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKQLVKC*SQIICC
Trigger: ACAACAGATAATTTGAGACAAACACTTAACCAGCTG...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGATCCATCTTTGTTGTaGTTATTACCAGTCTCATTC +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKDPSLL*LLPVSF
Trigger: GAATGAGACTGGTAATAACAACAACAAAGATGGATC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGTATTCATGACTGACTaGATTTCCCTTTTACATGCT +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKVFMTD*ISLLHA
Trigger: AGCATGTAAAAGGGAAATCAAGTCAGTCATGAATAC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp GCCTTCACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAAGACATTGTCATTCTCTaGCAGAGCCTTTTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: AFTIFYSFCCDTTKMASKDIVIL*QSLFKV
Trigger: TACTTTAAAAAGGCTCTGCAAGAGAATGACAATGTC...TTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGTGAAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCAAGGCCTTTAGTTTCTaGTTCAGAAGTCCCCTTATT +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSKAFSF*FRSPLI
Trigger: AATAAGGGGACTTCTGAACAAGAAACTAAAGGCCTT...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTGTACAATTCCTTTTTaGCTGGGAAGGCCTTTAGTT +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSCTIPF*LGRPLV
Trigger: AACTAAAGGCCTTCCCAGCAAAAAAGGAATTGTACA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000454516.7
CDS-3UTR CAA 90 bp ACCATCTTTTATTCATTCTGCTGTGATACAACTAAAATGGCCAGTAAATTCTCCTTTGACCCACAAACCTaGACAGTCTTTACACCAATA +
Preference number: 5 (lower is better)
Translates to: TIFYSFCCDTTKMASKFSFDPQT*TVFTPI
Trigger: TATTGGTGTAAAGACTGTCAAGGTTTGTGGGTCAAA...GGAGAATTTACTGGCCATTTTAGTTGTATCACAGCAGAATGAATAAAAGATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS TCA 90 bp ATCTTTGATTTTGCAGCTTCTATTAGAGCTCCACTTTCAGCTTTATaGTTAGATCCATCTTTGTTGTTGTTATTACCAGTCAAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: IFDFAASIRAPLSAL*LDPSLLLLLPVKRL
Trigger: GAGCCTTTTGACTGGTAATAACAACAACAAAGATGGATCTAATCATAAAGCTGAAAGTGGAGCTCTAATAGAAGCTGCAAAATCAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455381.5
CDS TCA 72 bp TTCGACTCGGGTTCTTCCCTGCAGGTGGCGTGGCCCTaGCTCCCGCCGCCGGGCTGGCCGCTGTCCTGGACC +
Preference number: 6 (lower is better)
Translates to: FDSGSSLQVAWP*LPPPGWPLSWT
Trigger: GGTCCAGGACAGCGGCCAGCCCGGCGGCGGGAGTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGTCGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000435630.5
ENST00000494439.5
ENST00000556853.5
CDS GCA 72 bp GCTGGCCGCTGTCCTGGACCTCCGAGGACAACTCTGTaGCTACCCCGGCTCCGGGCCCCCAGGTTCCGGCTA +
Preference number: 6 (lower is better)
Translates to: AGRCPGPPRTTL*LPRLRAPRFRL
Trigger: TAGCCGGAACCTGGGGGCCCGGAGCCGGGGTAGGCACAGAGTTGTCCTCGGAGGTCCAGGACAGCGGCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000435630.5
ENST00000494439.5
ENST00000556853.5
CDS GCA 72 bp TGCAGCCATCTTCCCGCTTCGACTCGGGTTCTTCCCTaGAGGTGGCGTGGCCCTGACTCCCGCCGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: CSHLPASTRVLP*RWRGPDSRRRA
Trigger: AGCCCGGCGGCGGGAGTCAGGGCCACGCCACCTGCAGGGAAGAACCCGAGTCGAAGCGGGAAGATGGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000435630.5
ENST00000494439.5
ENST00000556853.5
CDS GCA 72 bp TCAACAGCTGAGTGGACTCACGCCTGCAGGCTTGTCTaGAGCCATCTTCCCGCTTCGACTCGGGTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: STAEWTHACRLV*SHLPASTRVLP
Trigger: GGGAAGAACCCGAGTCGAAGCGGGAAGATGGCTGCAGACAAGCCTGCAGGCGTGAGTCCACTCAGCTGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494439.5
ENST00000556853.5
CDS CAA 72 bp CGTGCCAACAGCAAGGAAGCAACCCAATCTATCGCCTaGAGGAGCCACTTGGCACAGCAGTATTCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: RANSKEATQSIA*RSHLAQQYSSG
Trigger: GCCTGAGGAATACTGCTGTGCCAAGTGGCTCCTCAAGGCGATAGATTGGGTTGCTTCCTTGCTGTTGGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468599.1
ENST00000481526.5
CDS TCA 72 bp GTGCCAACAGCAAGGAAGCAACCCAATCTATCGCCTTaGGGAGCCACTTGGCACAGCAGTATTCCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: VPTARKQPNLSP*GATWHSSIPQA
Trigger: TGCCTGAGGAATACTGCTGTGCCAAGTGGCTCCTCAAGGCGATAGATTGGGTTGCTTCCTTGCTGTTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468599.1
ENST00000481526.5
CDS TCA 72 bp CGCTTACCAGCTGGGGAAAAAGAGTGTAGACACTGGTaGAGAGGCCGTGCCAACAGCAAGGAAGCAACCCAA +
Preference number: 6 (lower is better)
Translates to: RLPAGEKECRHW*RGRANSKEATQ
Trigger: TTGGGTTGCTTCCTTGCTGTTGGCACGGCCTCTTCACCAGTGTCTACACTCTTTTTCCCCAGCTGGTAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468599.1
ENST00000481526.5
CDS TCA 72 bp GATGGCCTCAGGGGGCACCTCTTTAGGATGGATCATTaGAGCCGCCTTTGCTCAAAACAGAAAGATGCCCGT +
Preference number: 6 (lower is better)
Translates to: DGLRGHLFRMDH*SRLCSKQKDAR
Trigger: ACGGGCATCTTTCTGTTTTGAGCAAAGGCGGCTTCAATGATCCATCCTAAAGAGGTGCCCCCTGAGGCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476967.1
CDS TCA 72 bp GAAGAAGGAAGCCTGGACTGCTCTGGACAGAAGTGCTaGAATTACAGGTTTATTTCCTCAGTCTGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: EEGSLDCSGQKC*NYRFISSVWAS
Trigger: AGAGGCCCAGACTGAGGAAATAAACCTGTAATTTCAGCACTTCTGTCCAGAGCAGTCCAGGCTTCCTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473064.1
CDS CCA 72 bp CAGTTTCTCTCTGATCCAGTCCTGAAGAAGGAAGCCTaGACTGCTCTGGACAGAAGTGCTGAAATTACAGGT +
Preference number: 6 (lower is better)
Translates to: QFLSDPVLKKEA*TALDRSAEITG
Trigger: ACCTGTAATTTCAGCACTTCTGTCCAGAGCAGTCCAGGCTTCCTTCTTCAGGACTGGATCAGAGAGAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473064.1
CDS TCA 72 bp GGAAAGCATTGGTGGATAACTCCTTCTCTTGATCAGTaGTCCCAGAGGACTGACCTGTGCCTTCATGTTTCT +
Preference number: 6 (lower is better)
Translates to: GKHWWITPSLDQ*SQRTDLCLHVS
Trigger: AGAAACATGAAGGCACAGGTCAGTCCTCTGGGATCACTGATCAAGAGAAGGAGTTATCCACCAATGCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000435630.5
ENST00000454516.7
ENST00000485136.5
CDS TCA 72 bp AACAAGGTAACAAACTTATTCAAGCTCATTCCCACGTaGCTTCCTAGGGACTACCTGTTGTTCTGCTCTGAT +
Preference number: 6 (lower is better)
Translates to: NKVTNLFKLIPT*LPRDYLLFCSD
Trigger: ATCAGAGCAGAACAACAGGTAGTCCCTAGGAAGTCACGTGGGAATGAGCTTGAATAAGTTTGTTACCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476967.1
CDS GCA 72 bp CAAGTATGGAGCACCTGCAAGTTTCACTGCTTTCGCTaGTCTCTGTGTTCCCACCTAATTGATTACTATTTT +
Preference number: 6 (lower is better)
Translates to: QVWSTCKFHCFR*SLCSHLIDYYF
Trigger: AAAATAGTAATCAATTAGGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAACTTGCAGGTGCTCCATACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331889.10
ENST00000435630.5
CDS TCA 72 bp TTCTTTATTTGCCCAAAAGTAGTCTCCGTTGCCAATTaGAAGAGTATACGACCGTTCACCCATAAGCTTGAC +
Preference number: 6 (lower is better)
Translates to: FFICPKVVSVAN*KSIRPFTHKLD
Trigger: GTCAAGCTTATGGGTGAACGGTCGTATACTCTTTCAATTGGCAACGGAGACTACTTTTGGGCAAATAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS GCA 72 bp TGGCAAAATGGATGCAACCAAGGTTATTCCAGAACATaGATCTCAAGCATTCACATTTCCAGCTGTATTCAT +
Preference number: 6 (lower is better)
Translates to: WQNGCNQGYSRT*ISSIHISSCIH
Trigger: ATGAATACAGCTGGAAATGTGAATGCTTGAGATGCATGTTCTGGAATAACCTTGGTTGCATCCATTTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS CAA 72 bp CCTTCTATGCGTACAGAGCTCTTTGACCCACAAACCTaGACAGTCTTTACACCAATAGACTTCATTTCTAAA +
Preference number: 6 (lower is better)
Translates to: PSMRTELFDPQT*TVFTPIDFISK
Trigger: TTTAGAAATGAAGTCTATTGGTGTAAAGACTGTCAAGGTTTGTGGGTCAAAGAGCTCTGTACGCATAGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454516.7
CDS TCA 72 bp ATCTCAAGCATTCACATTTCCAGCTGTATTCATGACTaGCTTGATTTCCCTTTTACATGCTTTCAGAGACTT +
Preference number: 6 (lower is better)
Translates to: ISSIHISSCIHD*LDFPFTCFQRL
Trigger: AAGTCTCTGAAAGCATGTAAAAGGGAAATCAAGTCAGTCATGAATACAGCTGGAAATGTGAATGCTTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416457.5
CDS TCA 72 bp ATATGGCTTCTGTATACTGCCGCAGATGATAAAGAATaGCTGCTTGATTATAGTACAACATGCTGTTTTCAA +
Preference number: 6 (lower is better)
Translates to: IWLLYTAADDKE*LLDYSTTCCFQ
Trigger: TTGAAAACAGCATGTTGTACTATAATCAAGCAGTCATTCTTTATCATCTGCGGCAGTATACAGAAGCCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000435630.5
ENST00000454516.7
ENST00000455381.5
ENST00000485136.5
ENST00000494439.5
ENST00000556853.5
CDS GCA 72 bp ACGAACACAGAAGATTTAGAATCTAAATTTTTGGGATaGAGGCCAGGCTACTTAAGTATCACAAAACTTCTT +
Preference number: 6 (lower is better)
Translates to: TNTEDLESKFLG*RPGYLSITKLL
Trigger: AAGAAGTTTTGTGATACTTAAGTAGCCTGGCCTGCATCCCAAAAATTTAGATTCTAAATCTTCTGTGTTCGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468599.1
ENST00000481526.5
CDS CAA 72 bp TTCTGTATACTGCCGCAGATGATAAAGAATGACTGCTaGATTATAGTACAACATGCTGTTTTCAACATCATC +
Preference number: 6 (lower is better)
Translates to: FCILPQMIKNDC*IIVQHAVFNII
Trigger: GATGATGTTGAAAACAGCATGTTGTACTATAATCAAGCAGTCATTCTTTATCATCTGCGGCAGTATACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328834.9
ENST00000331889.10
ENST00000416457.5
ENST00000435630.5
ENST00000454516.7
ENST00000455381.5
ENST00000466103.1
ENST00000485136.5
ENST00000494439.5
ENST00000556853.5
CDS CAA 72 bp AGAAAAACGAACACAGAAGATTTAGAATCTAAATTTTaGGGATGCAGGCCAGGCTACTTAAGTATCACAAAA +
Preference number: 6 (lower is better)
Translates to: RKTNTEDLESKF*GCRPGYLSITK
Trigger: TTTTGTGATACTTAAGTAGCCTGGCCTGCATCCCAAAAATTTAGATTCTAAATCTTCTGTGTTCGTTTTTCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468599.1
ENST00000481526.5