RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNOT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000125107

Ensembl transcript IDs: ENST00000317147.10, ENST00000441024.6, ENST00000562046.1, ENST00000563130.5, ENST00000563283.1, ENST00000564557.1, ENST00000565605.5, ENST00000565697.1, ENST00000566240.1, ENST00000567133.1, ENST00000567188.5, ENST00000567285.1, ENST00000568158.1, ENST00000568917.1, ENST00000569020.5, ENST00000569240.5, ENST00000569732.1, ENST00000569882.1, ENST00000569916.1, ENST00000570139.1

Found 1215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATaGAGCACTGTGCGACCGACTGGAATAACTTTTCGATTTCTGGGG +
Preference number: 1 (lower is better)
Translates to: WHLSLPLLAGPASVP*STVRPTGITFRFLG
Trigger: CCCCAGAAATCGAAAAGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR GCA 90 bp GTTGTGGATGTGCGCAATGGCCTGAGTCCCGACATAGAGCACCAGTaGATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGA +
Preference number: 1 (lower is better)
Translates to: VVDVRNGLSPDIEHQ*IDELEVVAIPRFIG
Trigger: TCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGGACTCAGGCCATTGCGCACATCCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR TCA 90 bp AGTCCACAGCCAAATTCTGGAAGATATCCATGTGTGCTGAGTGAGTaGTGGTGCTCATTGAAGGTGTGCTGCCCTTGTTGTGGATGTGCG +
Preference number: 1 (lower is better)
Translates to: SPQPNSGRYPCVLSE*WCSLKVCCPCCGCA
Trigger: CGCACATCCACAACAAGGGCAGCACACCTTCAATGAGCACCATCACTCACTCAGCACACATGGATATCTTCCAGAATTTGGCTGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CCA 90 bp CTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGTCAGAAGACATaGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCTCTTC +
Preference number: 1 (lower is better)
Translates to: LAFCYSLGHQECQKT*SYALRQVHGISCLF
Trigger: GAAGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR TCA 90 bp TCCAAGTCCACAGCCAAATTCTGGAAGATATCCATGTGTGCTGAGTaGGTGATGGTGCTCATTGAAGGTGTGCTGCCCTTGTTGTGGATG +
Preference number: 1 (lower is better)
Translates to: SKSTAKFWKISMCAE*VMVLIEGVLPLLWM
Trigger: CATCCACAACAAGGGCAGCACACCTTCAATGAGCACCATCACTCACTCAGCACACATGGATATCTTCCAGAATTTGGCTGTGGACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR TCA 90 bp TGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTaGAGTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAA +
Preference number: 1 (lower is better)
Translates to: WLPYWPLQKGTAWCN*SSECGYLGTGADLQ
Trigger: TTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTACTTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR GCA 90 bp CAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTaGCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACA +
Preference number: 1 (lower is better)
Translates to: QKTWSYALRQVHGIS*LFITRYQFMYLPWT
Trigger: TGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR GCA 90 bp GACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTaGATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGT +
Preference number: 1 (lower is better)
Translates to: DTRNVRRHGAMPSDK*MASAASSLQGTSLC
Trigger: ACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR GCA 90 bp TTGCTATTCTTTGGGACACCAGGAATGTCAGAAGACATGGAGCTATaGCCTCAGACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAG +
Preference number: 1 (lower is better)
Translates to: LLFFGTPGMSEDMEL*PQTSAWHQLPLHYK
Trigger: CTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAAGAATAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR GCA 90 bp GAAGTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTaGATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGC +
Preference number: 1 (lower is better)
Translates to: EVVSVAIWVPELICN*IQKEIATLSVQVHS
Trigger: GCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR GCA 90 bp GAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTGGCCTCTaGAAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGTGTGGCT +
Preference number: 1 (lower is better)
Translates to: ENSCDLFLDGFRIGL*KKVQHGATEVVSVA
Trigger: AGCCACACTCACTACTTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CCA 90 bp CCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATaGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTT +
Preference number: 1 (lower is better)
Translates to: PGMSEDMELCPQTSA*HQLPLHYKVPVYVL
Trigger: AAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR GCA 90 bp ATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTaGCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAG +
Preference number: 1 (lower is better)
Translates to: MASAASSLQGTSLCT*LGHSLHKAKKFQTK
Trigger: CTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CCA 90 bp ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTaGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTT +
Preference number: 1 (lower is better)
Translates to: ISCLFITRYQFMYLP*TQLAQSQEVPDKGF
Trigger: AAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CCA 90 bp AAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGTGTGGCTATTTaGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCG +
Preference number: 1 (lower is better)
Translates to: KKVQHGATEVVSVAI*VPELICNCIQKEIA
Trigger: CGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTACTTCAGTTGCACCATGCTGTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR GCA 90 bp CTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTaGACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCATGT +
Preference number: 1 (lower is better)
Translates to: LHYKVPVYVLALDTA*TKPRSSRQRFSLSC
Trigger: ACATGAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CCA 90 bp GTTTTTAATCAGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTaGCCTATTTACAATCAACCGTTCCAAGAGAACTCTTGTGATCTG +
Preference number: 1 (lower is better)
Translates to: VFNQLNEGNKKTPRM*PIYNQPFQENSCDL
Trigger: CAGATCACAAGAGTTCTCTTGGAACGGTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCTGATTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR TCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACGGCGGGAGAATAGCTTaGACCAGCGAAGGGGAGGTT +
Preference number: 2 (lower is better)
Translates to: PSITCWACFCPMQHCATDGGRIA*TSEGEV
Trigger: AACCTCCCCTTCGCTGGTTCAAGCTATTCTCCCGCC...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CAA 90 bp ACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTaGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTG +
Preference number: 2 (lower is better)
Translates to: TEMQFRLTGTCPFHY*LGLLLSHAALCDRL
Trigger: CAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACGATCCCAACAGTAGTTaGGGCAGATACCCACAAACC +
Preference number: 2 (lower is better)
Translates to: PSITCWACFCPMQHCATDDPNSS*GRYPQT
Trigger: GGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATC...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CCA 90 bp GTCCCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGATTCCCAGGTTCATTaGATACCTGTAGGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: VPSITCWACFCPMQHCATDSQVH*IPVGCC
Trigger: GCAGCAACCTACAGGTATCCAATGAACCTGGGAATC...GGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGACCTGCTTCTGTCCCATaGAGCACTGTGCGACCGACT +
Preference number: 2 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRPASVP*STVRPT
Trigger: AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGG...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTGTGAGACCTCTAGACTaGCACGTACAACAGAGATGC +
Preference number: 2 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAVRPLD*HVQQRC
Trigger: GCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCAC...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
3UTR-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGTGAGACCTCTAGACTaGCACGTACAACAGAGATGC +
Preference number: 2 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRVRPLD*HVQQRC
Trigger: GCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCAC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
3UTR-3UTR TCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCATCTTCAGTCAGTTTATaGACTCGGTGCAGTGAGACC +
Preference number: 2 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASSSVSL*TRCSET
Trigger: GGTCTCACTGCACCGAGTTCATAAACTGACTGAAGA...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR CCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTCTTTTTGAACTGAGGTaGCATTACTCCAGTGAAATT +
Preference number: 2 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTLFELR*HYSSEI
Trigger: AATTTCACTGGAGTAATGCCACCTCAGTTCAAAAAG...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CCA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGCACAAACCAAAGGGCTaGGAAAGTCAGGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKHKPKG*ESQEEL
Trigger: CAGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTG...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR CCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTCACAAACCAAAGGGCTaGGAAAGTCAGGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTHKPKG*ESQEEL
Trigger: CAGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTG...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCTCCACCTGGCTGACATaGCGAAACCCCATCTCCACT +
Preference number: 2 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSSTWLT*RNPIST
Trigger: AGTGGAGATGGGGTTTCGCCATGTCAGCCAGGTGGA...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTGGATGGCTTCCGTATTaGCCTCTGCAAAAAGGTACA +
Preference number: 2 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCGWLPY*PLQKGT
Trigger: TGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCC...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CCA 90 bp GCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACTTTTCAGTGTACAAATTCATaGTTCCAGAACTTAAACGCT +
Preference number: 2 (lower is better)
Translates to: AGPASVPCSTVRPTGITFQCTNS*FQNLNA
Trigger: AGCGTTTAAGTTCTGGAACCATGAATTTGTACACTG...AAAAGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR TCA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCGTGAGACCTCTAGACTaGCACGTACAACAGAGATGC +
Preference number: 2 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFVRPLD*HVQQRC
Trigger: GCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCAC...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR GCA 90 bp CATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGCCAAATTCTGGAGACATAGAGCACCAGTaGATTGATGAGCTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: HSKRDSDPQCPSPQPNSGDIEHQ*IDELEV
Trigger: AACCTCCAGCTCATCAATGCACTGGTGCTCTATGTC...TCCAGAATTTGGCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR GCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTTGCTCATTGAAGGTGTaGTGCCCTTGTTGTGGATGT +
Preference number: 2 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTCSLKV*CPCCGC
Trigger: ACATCCACAACAAGGGCAGCACACCTTCAATGAGCA...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CAA 90 bp CATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTaGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAA +
Preference number: 2 (lower is better)
Translates to: HGISCLFITRYQFMY*PWTQLAQSQEVPDK
Trigger: TTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CAA 90 bp GGCTCCCCATGCTCTCGAATTTTATCTGTGAGCCACTTATCAAGTTaGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGGTCAATAACA +
Preference number: 2 (lower is better)
Translates to: GSPCSRILSVSHLSS*RYSRREASAARSIT
Trigger: TGTTATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGATAAAATTCGAGAGCATGGGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565605.5
3UTR-3UTR TCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTAAATCCTTTTTGAACTaGGGTGGCATTACTCCAGTG +
Preference number: 2 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCKSFLN*GGITPV
Trigger: CACTGGAGTAATGCCACCTCAGTTCAAAAAGGATTT...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR TCA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTTGTGTGCTGAGTGAGTaGTGGTGCTCATTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: NQPFQENSCDLFLDGFRICVLSE*WCSLKV
Trigger: CACCTTCAATGAGCACCATCACTCACTCAGCACACA...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR GCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGTTAAACTTTGGAACGTaGCCACATAAGACAGGAGGC +
Preference number: 2 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQLNFGT*PHKTGG
Trigger: GCCTCCTGTCTTATGTGGGCACGTTCCAAAGTTTAA...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR GCA 90 bp AAAACAACAGGATCACAGTATCTGCGTCCTTCTTGCCTAGCATGTTTTCTCAGCGTCCATCTCAGGGCCTaGTTTTTCTACTGCAGTCTT +
Preference number: 2 (lower is better)
Translates to: KTTGSQYLRPSCLACFLSVHLRA*FFYCSL
Trigger: AAGACTGCAGTAGAAAAAGCAGGCCCTGAGATGGAC...GCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATACTGTGATCCTGTTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566240.1
3UTR CAA 90 bp CATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTaGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: HQLPLHYKVPVYVLA*DTACTKPRSSRQRF
Trigger: AAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR TCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGATATCCATGTGTGCTaGGTGAGTGATGGTGCTCAT +
Preference number: 2 (lower is better)
Translates to: VVSVAIWVPELICNCIQKDIHVC*VSDGAH
Trigger: ATGAGCACCATCACTCACTCAGCACACATGGATATC...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR TCA 90 bp GCTCTGGCATCCGTTCAGCTTGATATGTTAAAACAACAGGATCACAGTATCTGCTCTACTGCAGTCTTCTaGATAAAACAGCAAGCCAAC +
Preference number: 2 (lower is better)
Translates to: ALASVQLDMLKQQDHSICSTAVF*IKQQAN
Trigger: GTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGA...GCAGATACTGTGATCCTGTTGTTTTAACATATCAAGCTGAACGGATGCCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566240.1
3UTR-3UTR GCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCTTAAACTTTGGAACGTaGCCACATAAGACAGGAGGC +
Preference number: 2 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSLNFGT*PHKTGG
Trigger: GCCTCCTGTCTTATGTGGGCACGTTCCAAAGTTTAA...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CCA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAAGATCCCAACAGTAGTTaGGGCAGATACCCACAAACC +
Preference number: 2 (lower is better)
Translates to: NKMVQMQSALEYVWVETKDPNSS*GRYPQT
Trigger: GGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATC...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CAA 90 bp TCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTaGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCATG +
Preference number: 2 (lower is better)
Translates to: SSLQGTSLCTCLGHS*HKAKKFQTKVFSFM
Trigger: CATGAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR TCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACCAGGAAAGTGACTGGTaGTCGAGTTTTAAGATAGGA +
Preference number: 2 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINQESDW*SSFKIG
Trigger: TCCTATCTTAAAACTCGATCACCAGTCACTTTCCTG...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR GCA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAAGTGCATGGCATCAGCTaGCTCTTCATTACAAGGTAC +
Preference number: 2 (lower is better)
Translates to: NKMVQMQSALEYVWVETKVHGIS*LFITRY
Trigger: GTACCTTGTAATGAAGAGGCAGCTGATGCCATGCAC...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR CCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACTCCACAGCCAAATTCTaGAAGATATCCATGTGTGCT +
Preference number: 2 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINSTAKF*KISMCA
Trigger: AGCACACATGGATATCTTCCAGAATTTGGCTGTGGA...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CCA 90 bp TTTTTCTACTGCAGTCTTCTGAATAAAACAGCAAGCCAACTCACAATTGTCCTGCATTTCTCTTTGTTGTaGGGAAGCAGTCTGAATTAT +
Preference number: 2 (lower is better)
Translates to: FFYCSLLNKTASQLTIVLHFSLL*GSSLNY
Trigger: ATAATTCAGACTGCTTCCCCACAACAAAGAGAAATG...CAGGACAATTGTGAGTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566240.1
3UTR-3UTR GCA 90 bp TTTGTTGTGGGGAAGCAGTCTGAATTATTAACCATGATATCTGAGACTCAAAACAAAAGTGTGTGCACATaGAACATCACTTTAAGTCAT +
Preference number: 2 (lower is better)
Translates to: FVVGKQSELLTMISETQNKSVCT*NITLSH
Trigger: ATGACTTAAAGTGATGTTGCATGTGCACACACTTTT...GTTTTGAGTCTCAGATATCATGGTTAATAATTCAGACTGCTTCCCCACAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566240.1
3UTR GCA 72 bp GTGCGCAATGGCCTGAGTCCCGACATAGAGCACCAGTaGATTGATGAGCTGGAGGTTGTAGCGATTCCCAGG +
Preference number: 3 (lower is better)
Translates to: VRNGLSPDIEHQ*IDELEVVAIPR
Trigger: CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGGACTCAGGCCATTGCGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR GCA 72 bp TCCCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATaGAGCACTGTGCGACCGACTGGAATAACTTTTCGA +
Preference number: 3 (lower is better)
Translates to: SLPLLAGPASVP*STVRPTGITFR
Trigger: TCGAAAAGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CAA 90 bp TTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATATCTTGTGATCTGTTCTaGGATGGCTTCCGTATTGGC +
Preference number: 3 (lower is better)
Translates to: LLAGPASVPCSTVRPTGISCDLF*DGFRIG
Trigger: GCCAATACGGAAGCCATCCAAGAACAGATCACAAGA...TATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CCA 72 bp ACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTaGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: TDTYNRDAVSSN*HLSLPLLAGPA
Trigger: AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR TCA 72 bp TTTAGGCCTGGTCTGGTTTCCCTTTATATAAAGAGCTaGCCCCCATCTCAGGCGGCTGAGGTGTATAATCCC +
Preference number: 3 (lower is better)
Translates to: FRPGLVSLYIKS*PPSQAAEVYNP
Trigger: GGGATTATACACCTCAGCCGCCTGAGATGGGGGTCAGCTCTTTATATAAAGGGAAACCAGACCAGGCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR CAA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAACGATTCCCAGGTTCATaGGATACCTGTAGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: LDGFRIGLCKKVQHGATERFPGS*DTCRLL
Trigger: CAGCAACCTACAGGTATCCAATGAACCTGGGAATCG...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR TCA 72 bp ACAGCCAAATTCTGGAAGATATCCATGTGTGCTGAGTaGGTGATGGTGCTCATTGAAGGTGTGCTGCCCTTG +
Preference number: 3 (lower is better)
Translates to: TAKFWKISMCAE*VMVLIEGVLPL
Trigger: CAAGGGCAGCACACCTTCAATGAGCACCATCACTCACTCAGCACACATGGATATCTTCCAGAATTTGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR TCA 72 bp TATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTaGAGTAGTGAGTGTGGCTATTTGGGTACCGGAGCT +
Preference number: 3 (lower is better)
Translates to: YWPLQKGTAWCN*SSECGYLGTGA
Trigger: AGCTCCGGTACCCAAATAGCCACACTCACTACTTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR GCA 72 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTaGATGGCATCAGCTGCCTCTTCATTACAAGGTACC +
Preference number: 3 (lower is better)
Translates to: NVRRHGAMPSDK*MASAASSLQGT
Trigger: GGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CCA 72 bp TCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATaGCATCAGCTGCCTCTTCATTACAAGGTACCAGTT +
Preference number: 3 (lower is better)
Translates to: SEDMELCPQTSA*HQLPLHYKVPV
Trigger: AACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR TCA 72 bp CCAAATTCTGGAAGATATCCATGTGTGCTGAGTGAGTaGTGGTGCTCATTGAAGGTGTGCTGCCCTTGTTGT +
Preference number: 3 (lower is better)
Translates to: PNSGRYPCVLSE*WCSLKVCCPCC
Trigger: ACAACAAGGGCAGCACACCTTCAATGAGCACCATCACTCACTCAGCACACATGGATATCTTCCAGAATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR GCA 72 bp TGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTaGCTCTTCATTACAAGGTACCAGTTTATGTACTTG +
Preference number: 3 (lower is better)
Translates to: WSYALRQVHGIS*LFITRYQFMYL
Trigger: CAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR GCA 72 bp TGTGATCTGTTCTTGGATGGCTTCCGTATTGGCCTCTaGAAAAAGGTACAGCATGGTGCAACTGAAGTAGTG +
Preference number: 3 (lower is better)
Translates to: CDLFLDGFRIGL*KKVQHGATEVV
Trigger: CACTACTTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAAGAACAGATCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAATTCAAACTGGCTTTTaGCTATTCTTTGGGACACCA +
Preference number: 3 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRIQTGF*LFFGTP
Trigger: TGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAAT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR GCA 72 bp GCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTaGCTTGGACACAGCTTGCACAAAGCCAAGAAGTTC +
Preference number: 3 (lower is better)
Translates to: AASSLQGTSLCT*LGHSLHKAKKF
Trigger: GAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR-3UTR CAA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGTACCGGAGCTGATTaGCAATTGCATTCAAAAAGA +
Preference number: 3 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTGTGAD*QLHSKR
Trigger: TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACC...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CCA 72 bp CTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTaGACACAGCTTGCACAAAGCCAAGAAGTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: LFITRYQFMYLP*TQLAQSQEVPD
Trigger: GTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CCA 72 bp CAGCATGGTGCAACTGAAGTAGTGAGTGTGGCTATTTaGGTACCGGAGCTGATTTGCAATTGCATTCAAAAA +
Preference number: 3 (lower is better)
Translates to: QHGATEVVSVAI*VPELICNCIQK
Trigger: TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTACTTCAGTTGCACCATGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CCA 72 bp CAGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTaGCCTATTTACAATCAACCGTTCCAAGAGAACTCT +
Preference number: 3 (lower is better)
Translates to: QLNEGNKKTPRM*PIYNQPFQENS
Trigger: AGAGTTCTCTTGGAACGGTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR-3UTR CAA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATATACCAGTTTATGTACTaGCCTTGGACACAGCTTGCA +
Preference number: 3 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIYQFMY*PWTQLA
Trigger: TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTA...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR GCA 72 bp GTTAAAACAACAGGATCACAGTATCTGCGTCCTTCTTaGCTAGCATGTTTTCTCAGCTCAAATTCAGTTGCT +
Preference number: 3 (lower is better)
Translates to: VKTTGSQYLRPS*LACFLSSNSVA
Trigger: AGCAACTGAATTTGAGCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATACTGTGATCCTGTTGTTTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566240.1
3UTR-3UTR CAA 90 bp TTTTTCTACTGCAGTCTTCTGAATAAAACAGCAAGCCAACTCACAATTGTCCTGCATCATTTCTCTTTGTaGTGGGGAAGCAGTCTGAAT +
Preference number: 3 (lower is better)
Translates to: FFYCSLLNKTASQLTIVLHHFSL*WGSSLN
Trigger: ATTCAGACTGCTTCCCCACAACAAAGAGAAATGATG...CAGGACAATTGTGAGTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR TCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGCGGCCAGCTGCTGCTaGATGGTAGAGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLAASCC*MVEIHP
Trigger: TGGGTGAATCTCTACCATTCAGCAGCAGCTGGCCGC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGCGGCCAGCTGCTGCTaGATGGTAGAGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGAASCC*MVEIHP
Trigger: TGGGTGAATCTCTACCATTCAGCAGCAGCTGGCCGC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GTCCCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCCTATACCAGTCAGGCTaGCTGTGCCAAGACCACCTA +
Preference number: 4 (lower is better)
Translates to: VPSITCWACFCPMQHCATLYQSG*LCQDHL
Trigger: TAGGTGGTCTTGGCACAGGCAGCCTGACTGGTATAG...GGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACAGGGTCGTTATTCACTaGAGGGAGTCCAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDRVVIH*RESKST
Trigger: GGTGCTCTTGGACTCCCTGCAGTGAATAACGACCCT...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACGACAGCCCGTTCAATTaGCTGACGCACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDDSPFN*LTHTLL
Trigger: AAGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTC...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACTTTTCTCTGTTCTGAAACATaGCACCTCAGGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: AGPASVPCSTVRPTGITFLCSET*HLRRLR
Trigger: CCGGAGCCGCCTGAGGTGCCATGTTTCAGAACAGAG...AAAAGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGCTCTGTTCTGAAACATaGCACCTCAGGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLLCSET*HLRRLR
Trigger: CCGGAGCCGCCTGAGGTGCCATGTTTCAGAACAGAG...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACAAAGCTGACTCCAGTTaGCCTGGTGACCGTAACCGT +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDKADSS*PGDRNR
Trigger: ACGGTTACGGTCACCAGGCCAACTGGAGTCAGCTTT...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGTGGTAGCTGTACTGTaGCTGTGGTGGAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGVVAVL*LWWNRG
Trigger: GCCACGGTTCCACCACAGCCACAGTACAGCTACCAC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGGATGGACCAGCTCCTaGACAGCCCGTTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGGWTSS*TARSIA
Trigger: GGCAATTGAACGGGCTGTCCAGGAGCTGGTCCATCC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACGGATCATGGTGGGATTaGCAGCAGGATTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDGSWWD*QQDCAA
Trigger: AGCAGCACAATCCTGCTGCCAATCCCACCATGATCC...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTCTGCCTCAGGACCGTaGCGATTCACAATATGCTGT +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDSASGP*RFTICC
Trigger: ACAGCATATTGTGAATCGGCACGGTCCTGAGGCAGA...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGCCAAAGGCTCCCTTCTaGCCAAAGAGGAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLPKAPF*PKRRWE
Trigger: CTCCCATCTCCTCTTTGGGCAGAAGGGAGCCTTTGG...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTTATGCCCGGCCATCCTaGAGAGCTTTTAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTYARPS*RAFRTK
Trigger: CTTGGTCCTAAAAGCTCTGCAGGATGGCCGGGCATA...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCCATGGAGACCCATATaGCCGGCCATCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQPWRPI*PAILQS
Trigger: GCTCTGCAGGATGGCCGGGCATATGGGTCTCCATGG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTCCATGGAGACCCATATaGCCGGCCATCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: MQFRLTGTCPFHYLLGLLPWRPI*PAILQS
Trigger: GCTCTGCAGGATGGCCGGGCATATGGGTCTCCATGG...AAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCCATGGAGACCCATATaGCCGGCCATCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAPWRPI*PAILQS
Trigger: GCTCTGCAGGATGGCCGGGCATATGGGTCTCCATGG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATACCTCAGAAGATACTCTaGCTTCTCCCTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLAGPASVPCSTVRPTGIPQKIL*LLPQAW
Trigger: CCAGGCCTGAGGGAGAAGGCAGAGTATCTTCTGAGG...TATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGAAAACCCTTGCAACCTaGGCAGCTGTGACCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRKTLAT*AAVTSR
Trigger: TCGGGAGGTCACAGCTGCCCAGGTTGCAAGGGTTTT...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGCTGTACTGTGGCTGTaGTGGAACCGTGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGAVLWL*WNRGCT
Trigger: TGTACAGCCACGGTTCCACCACAGCCACAGTACAGC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTACTTGGCTCGGATCATaGTGGGATTGGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTTWLGS*WDWQQD
Trigger: ATCCTGCTGCCAATCCCACCATGATCCGAGCCAAGT...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCAACCTGGGCAGCTGTaGCCTCCCGAACACCAAACT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQQPGQL*PPEHQT
Trigger: AGTTTGGTGTTCGGGAGGTCACAGCTGCCCAGGTTG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACGTTTCTGATAGCTCCTaGGAAACACTCCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDVSDSS*ETLPAQ
Trigger: TTGTGCAGGGAGTGTTTCTCAGGAGCTATCAGAAAC...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCGCGGCCAGCTGCTGCTaGATGGTAGAGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: NVRRHGAMPSDKCMASAAAASCC*MVEIHP
Trigger: TGGGTGAATCTCTACCATTCAGCAGCAGCTGGCCGC...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGGCGGGAGAATAGCTTaGACCAGCGAAGGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQGGRIA*TSEGEV
Trigger: AACCTCCCCTTCGCTGGTTCAAGCTATTCTCCCGCC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCATTCCCAAAACCCTTaGAACCTGGGCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGHSQNP*NLGSCD
Trigger: GTCACAGCTGCCCAGGTTGCAAGGGTTTTGGGAATG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGCTATACCAGTCAGGCTaGCTGTGCCAAGACCACCTA +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLLYQSG*LCQDHL
Trigger: TAGGTGGTCTTGGCACAGGCAGCCTGACTGGTATAG...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTCAGAGTAATGTGTGGTaGCAAGCCCGCAAGGGAATA +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTQSNVW*QARKGI
Trigger: TATTCCCTTGCGGGCTTGGCACCACACATTACTCTG...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGACAGCCCGTTCAATTaGCTGACGCACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLDSPFN*LTHTLL
Trigger: AAGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTATAGGCCACCCCTTCTaGTGTGGCGTATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAIGHPF*CGVCAS
Trigger: GCTGGCACATACGCCACAGCAGAAGGGGTGGCCTAT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGATTACTTGCTGGGCCTaGTTCTGTCCCATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLITCWA*FCPMQH
Trigger: GTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAAT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCTCTGTTCTGAAACATaGCACCTCAGGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRALCSET*HLRRLR
Trigger: CCGGAGCCGCCTGAGGTGCCATGTTTCAGAACAGAG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCAGGAGGACGTCCTTTTaGCATAACTCCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGRRTSF*HNSRWW
Trigger: CCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGTGGTAGCTGTACTGTaGCTGTGGTGGAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESVVAVL*LWWNRG
Trigger: GCCACGGTTCCACCACAGCCACAGTACAGCTACCAC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACTTTTTGGCTCGGATCATGGTaGGATTGGCAGCAGGATTGT +
Preference number: 4 (lower is better)
Translates to: AGPASVPCSTVRPTGITFWLGSW*DWQQDC
Trigger: ACAATCCTGCTGCCAATCCCACCATGATCCGAGCCA...AAAAGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTCGAGACAATTTGGCCTaGTCATACTGCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPARDNLA*SYCSPL
Trigger: GAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCG...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGTTTCTGGAGGAAGTTaGGCACTTTTGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLVSGGS*ALLGWS
Trigger: AGACCAGCCCAAAAGTGCTCAACTTCCTCCAGAAAC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGTTTCTGGAGGAAGTTaGGCACTTTTGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGVSGGS*ALLGWS
Trigger: AGACCAGCCCAAAAGTGCTCAACTTCCTCCAGAAAC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACACAATTCTCTCAGTTTaGTCTGTGGCCACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDTILSV*SVATSN
Trigger: GTTGCTTGTGGCCACAGATCAAACTGAGAGAATTGT...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCGCCCGTTCAATTGCCTaGCGCACACACTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISARSIA*RTHCFN
Trigger: GTTGAAGCAGTGTGTGCGTCAGGCAATTGAACGGGC...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp TTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATACACCAACTTTCAGCCTaGTTTGCTCTGGCATCCGTT +
Preference number: 4 (lower is better)
Translates to: LLAGPASVPCSTVRPTGIHQLSA*FALASV
Trigger: AACGGATGCCAGAGCAAATCAGGCTGAAAGTTGGTG...TATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCACCAACTTTCAGCCTaGTTTGCTCTGGCATCCGTT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGHQLSA*FALASV
Trigger: AACGGATGCCAGAGCAAATCAGGCTGAAAGTTGGTG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGTCACGAGCAGTGCAATaGGTCGAACAAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLSRAVQ*VEQRHP
Trigger: TGGATGCCTTTGTTCGACTCATTGCACTGCTCGTGA...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTCACGAGCAGTGCAATaGGTCGAACAAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGSRAVQ*VEQRHP
Trigger: TGGATGCCTTTGTTCGACTCATTGCACTGCTCGTGA...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCCCAAAGGCTCCCTTCTaGCCAAAGAGGAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISPKAPF*PKRRWE
Trigger: CTCCCATCTCCTCTTTGGGCAGAAGGGAGCCTTTGG...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAATAGGCCACCCCTTCTaGTGTGGCGTATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASIGHPF*CGVCAS
Trigger: GCTGGCACATACGCCACAGCAGAAGGGGTGGCCTAT...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGATAGGCCACCCCTTCTaGTGTGGCGTATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLIGHPF*CGVCAS
Trigger: GCTGGCACATACGCCACAGCAGAAGGGGTGGCCTAT...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTGTCAAGATTCATTGCTaGTTGGGGCGGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAVKIHC*LGRKQA
Trigger: CGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGAC...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGTGCTGGTTTGCCTCTaGCCACACCTGAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQVLVCL*PHLRQV
Trigger: GACTTGTCTCAGGTGTGGCCAGAGGCAAACCAGCAC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GTCCCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCAGGGTTTCAATGGTGTaGAACAGATCTGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VPSITCWACFCPMQHCATRVSMV*NRSASV
Trigger: TACTGAGGCAGATCTGTTCCACACCATTGAAACCCT...GGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCCACCCCTTCTGCTGTaGCGTATGTGCCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQPPLLL*RMCQHS
Trigger: AGAATGCTGGCACATACGCCACAGCAGAAGGGGTGG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGCACAAACCAAAGGGCTaGGAAAGTCAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRHKPKG*ESQEEL
Trigger: CAGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTG...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACGTACTTTGCTTAATTTaGGCACTTTACTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDVLCLI*ALYSAG
Trigger: CCCAGCTGAGTAAAGTGCTCAAATTAAGCAAAGTAC...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAACAACCTGGGCAGCTGTaGCCTCCCGAACACCAAACT +
Preference number: 4 (lower is better)
Translates to: LDGFRIGLCKKVQHGATEQPGQL*PPEHQT
Trigger: AGTTTGGTGTTCGGGAGGTCACAGCTGCCCAGGTTG...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGATAAGTTGGCGAATTaGGGGAGACTGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRDKLAN*GRLSLP
Trigger: GGGCAGGGACAGTCTCCCTCAATTCGCCAACTTATC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCGAGACAATTTGGCCTaGTCATACTGCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRARDNLA*SYCSPL
Trigger: GAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCGAGGTATTCACGACGTaGAGCAAGTGCAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISEVFTT*SKCSKV
Trigger: GACCTTGCTGCACTTGCTTCACGTCGTGAATACCTC...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGGTGTGAGGGGCAGCTaGACCACCTATACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQGVRGS*TTYTKR
Trigger: TCTCTTAGTATAGGTGGTTCAGCTGCCCCTCACACC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGTGACTGAGGGGTACTaGATGCAGAACCCAAATTTG +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGVTEGY*MQNPNL
Trigger: CAAATTTGGGTTCTGCATTCAGTACCCCTCAGTCAC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTGCTTTTGCTGGTGACTaGGGGGTACTGAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPAAFAGD*GVLNAE
Trigger: TTCTGCATTCAGTACCCCTCAGTCACCAGCAAAAGC...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGAAATGCTTTTGCTGGTaGCTGAGGGGTACTGAATGC +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLKCFCW*LRGTEC
Trigger: GCATTCAGTACCCCTCAGTCACCAGCAAAAGCATTT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCAAATGCTTTTGCTGGTaGCTGAGGGGTACTGAATGC +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGKCFCW*LRGTEC
Trigger: GCATTCAGTACCCCTCAGTCACCAGCAAAAGCATTT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCCTGAATGCAGTGGTCTaGTTGGGGGTTGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: NVRRHGAMPSDKCMASAALNAVV*LGVERG
Trigger: ACCCCTTTCAACCCCCAATCAGACCACTGCATTCAG...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCTGAATGCAGTGGTCTaGTTGGGGGTTGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRALNAVV*LGVERG
Trigger: ACCCCTTTCAACCCCCAATCAGACCACTGCATTCAG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATGCTGGAATGTAGGCTaGTTCAGTCCAGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRCWNVG*FSPEVP
Trigger: GGGCACCTCTGGACTGAATCAGCCTACATTCCAGCA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATATCTGCCTCAGTAACATaGGCAACACTCCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: LLAGPASVPCSTVRPTGISASVT*ATLLSS
Trigger: GGATGAAAGGAGTGTTGCTCATGTTACTGAGGCAGA...TATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCAAGTTTGGGCCTCCATaGGCACGATCAATCATTGCT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGKFGPP*ARSIIA
Trigger: AGCAATGATTGATCGTGCTCATGGAGGCCCAAACTT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTTGGTGGCCTCCCCTaGGTGTTTCACGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELVGGLP*VFHEQC
Trigger: GCACTGCTCGTGAAACACTCAGGGGAGGCCACCAAC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGATATCCATGTGTGCTaGGTGAGTGATGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGDIHVC*VSDGAH
Trigger: ATGAGCACCATCACTCACTCAGCACACATGGATATC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGTCTTCAGTCAGTTTATaGACTCGGTGCAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLSSVSL*TRCSET
Trigger: GGTCTCACTGCACCGAGTTCATAAACTGACTGAAGA...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GTCCCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCCCACTGAAATCCACATaGGAAAATAGGCAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: VPSITCWACFCPMQHCATPLKST*ENRQRN
Trigger: ATTACGCTGCCTATTTTCGCATGTGGATTTCAGTGG...GGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCATTCCCAAAACCCTTaGAACCTGGGCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESHSQNP*NLGSCD
Trigger: GTCACAGCTGCCCAGGTTGCAAGGGTTTTGGGAATG...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCACTCCAGATCCCACTaGCCGGAGCAGAAATACTCT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESHSRSH*PEQKYS
Trigger: AGAGTATTTCTGCTCCGGGCAGTGGGATCTGGAGTG...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCTGAGAAACACTCCCTaGACAAGCTTGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESLRNTP*TSLQTG
Trigger: GCCTGTCTGCAAGCTTGTGCAGGGAGTGTTTCTCAG...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCTGAGGGGTACTGAATaGAGAACCCAAATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGLRGTE*RTQIWR
Trigger: CCTCCAAATTTGGGTTCTGCATTCAGTACCCCTCAG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCTATACCAGTCAGGCTaGCTGTGCCAAGACCACCTA +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRALYQSG*LCQDHL
Trigger: TAGGTGGTCTTGGCACAGGCAGCCTGACTGGTATAG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGATTCAGTCCAGAGGTaGCCAGTTTCCTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLDSVQR*PVSSVQ
Trigger: TTGTACAGAGGAAACTGGGCACCTCTGGACTGAATC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGGAGTTCTTCTGGCTaGTTGACATCTTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTGSSSG*LTSFFG
Trigger: TCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCC...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGTCCATCTCAGGGCCTaGTTTTTCTACTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLVHLRA*FFYCSL
Trigger: AAGACTGCAGTAGAAAAAGCAGGCCCTGAGATGGAC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGACTTTCAGCCTGATTTaGTCTGGCATCCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLTFSLI*SGIRSA
Trigger: AGCTGAACGGATGCCAGAGCAAATCAGGCTGAAAGT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGTGTGGAACAGATCTaGCTCAGTAACATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLGVEQI*LSNMSN
Trigger: GTTGCTCATGTTACTGAGGCAGATCTGTTCCACACC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGACATAGAGCACCAGTaGATTGATGAGCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGDIEHQ*IDELEV
Trigger: AACCTCCAGCTCATCAATGCACTGGTGCTCTATGTC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGAGCACTTTACTCAGCTaGGCAAATAAGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRSTLLS*ANKWGA
Trigger: TGCACCCCACTTATTTGCCCAGCTGAGTAAAGTGCT...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp TTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAAAGGCCTTCAAGTCCTaGGCCACATCAAGTATTCGA +
Preference number: 4 (lower is better)
Translates to: LLAGPASVPCSTVRPTGIKAFKS*ATSSIR
Trigger: TCGAATACTTGATGTGGCCCAGGACTTGAAGGCCTT...TATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GTCCCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCTGCAGAACCCAAATTTaGAGGAAAACCCTGCATACT +
Preference number: 4 (lower is better)
Translates to: VPSITCWACFCPMQHCATCRTQI*RKTLHT
Trigger: AGTATGCAGGGTTTTCCTCCAAATTTGGGTTCTGCA...GGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTAAAGCTGACTCCAGTTaGCCTGGTGACCGTAACCGT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAKADSS*PGDRNR
Trigger: ACGGTTACGGTCACCAGGCCAACTGGAGTCAGCTTT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACAACGATCTGAGAAATTaGCTGCAGCTTTATCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDNDLRN*LQLYQR
Trigger: CCTCTGATAAAGCTGCAGCCAATTTCTCAGATCGTT...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGTACTGTGGCTGTGGTaGAACCGTGGCTGTACAAGT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQVLWLW*NRGCTS
Trigger: ACTTGTACAGCCACGGTTCCACCACAGCCACAGTAC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCCCAAGCTTGCTTCATaGGCTGGGCTAAAAATCCCG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAPKLAS*AGLKIP
Trigger: CGGGATTTTTAGCCCAGCCCATGAAGCAAGCTTGGG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTATGCAGAGAAAGCTTTaGTACTGTCGCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAMQRKL*YCRGQL
Trigger: CAGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCAT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGGATCATGGTGGGATTaGCAGCAGGATTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQGSWWD*QQDCAA
Trigger: AGCAGCACAATCCTGCTGCCAATCCCACCATGATCC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTGGCTCGGATCATGGTaGGATTGGCAGCAGGATTGT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESWLGSW*DWQQDC
Trigger: ACAATCCTGCTGCCAATCCCACCATGATCCGAGCCA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTACTTGGCTCGGATCATaGTGGGATTGGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRATWLGS*WDWQQD
Trigger: ATCCTGCTGCCAATCCCACCATGATCCGAGCCAAGT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGATTCCCAGGTTCATTaGATACCTGTAGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLDSQVH*IPVGCC
Trigger: GCAGCAACCTACAGGTATCCAATGAACCTGGGAATC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGCTTGTGATCTGTTCTTaGATGGCTTCCGTATTGGCC +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRLVICS*MASVLA
Trigger: GGCCAATACGGAAGCCATCCAAGAACAGATCACAAG...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCCTTCCATTACTTGCTaGGCCTGCTTCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAPSITC*ACFCPM
Trigger: CATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCAGCCTACTTCTTGCATaGAATCAGCCAAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGSLLLA*NQPKSS
Trigger: AGAGCTCTTTGGCTGATTTCATGCAAGAAGTAGGCT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAGCCACTTATCAAGTTTaGGGTATTCACGACGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLAGPASVPCSTVRPTGIATYQV*GIHDVK
Trigger: CTTCACGTCGTGAATACCTCAAACTTGATAAGTGGC...TATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTGTGACTGAGGGGTACTaGATGCAGAACCCAAATTTG +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPAVTEGY*MQNPNL
Trigger: CAAATTTGGGTTCTGCATTCAGTACCCCTCAGTCAC...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGGTCTGATTGGGGGTTaGAAGGGGTGGAAATGCTTT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESGLIGG*KGWKCF
Trigger: AAAGCATTTCCACCCCTTTCAACCCCCAATCAGACC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTGCCCGTTCAATTGCCTaGCGCACACACTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCARSIA*RTHCFN
Trigger: GTTGAAGCAGTGTGTGCGTCAGGCAATTGAACGGGC...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGCAATTAGGCACCTTGTaGTCTGTTTGTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRQLGTL*SVCCTM
Trigger: CATGGTGCAACAAACAGATCACAAGGTGCCTAATTG...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTAAATCCTTTTTGAACTaGGGTGGCATTACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTKSFLN*GGITPV
Trigger: CACTGGAGTAATGCCACCTCAGTTCAAAAAGGATTT...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTGTGTGCTGAGTGAGTaGTGGTGCTCATTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQCVLSE*WCSLKV
Trigger: CACCTTCAATGAGCACCATCACTCACTCAGCACACA...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTTGACTTGCTCATACTaGCCAACCTCTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESLTCSY*PTSASL
Trigger: GAGGCTTGCAGAGGTTGGGCAGTATGAGCAAGTCAA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCAAGAGCTGTTTGACTTaGTCATACTGCCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGKSCLT*SYCPTS
Trigger: AGAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGTCCCTGCCCATGCCATaGATAGTGCAAAATAATAGC +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLSLPMP*IVQNNS
Trigger: GCTATTATTTTGCACTATGCATGGCATGGGCAGGGA...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGACTCCCTGCACAAGCTTaGAGACAGGCCAACATTGTC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRLPAQA*RQANIV
Trigger: GACAATGTTGGCCTGTCTGCAAGCTTGTGCAGGGAG...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTCTGAGGGGTACTGAATaGAGAACCCAAATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPALRGTE*RTQIWR
Trigger: CCTCCAAATTTGGGTTCTGCATTCAGTACCCCTCAG...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTATCTGCGTCCTTCTTaGCTAGCATGTTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRYLRPS*LACFLS
Trigger: GCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATA...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GTCCCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCAGGATTTTTACTAACTaGATAGCAAATGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VPSITCWACFCPMQHCATRIFTN*IANATA
Trigger: GGCTGTGGCATTTGCTATGCAGTTAGTAAAAATCCT...GGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCTGCTGTGGCGTATGTaGCAGCATTCTTGCAATAAA +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGLLWRM*QHSCNK
Trigger: TTTATTGCAAGAATGCTGGCACATACGCCACAGCAG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGCAGCACTCTTAAAGTaGCCTTGTAGAGGATTTGCA +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGAALLK*PCRGFA
Trigger: TGCAAATCCTCTACAAGGGCACTTTAAGAGTGCTGC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTGGATACCTGTAGGTTaGTGCGCAGATCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESWIPVG*CADQTG
Trigger: TCCTGTCTGATCTGCGCAGCAACCTACAGGTATCCA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAATGCCCTCAGACAAGTaGATGGCATCAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRMPSDK*MASAAS
Trigger: AGAGGCAGCTGATGCCATGCACTTGTCTGAGGGCAT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCAGATTCATTGCTGGTTaGGGCGGAAGCAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFRFIAG*GGSRRP
Trigger: CGGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCT...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACTTTTGCAATGGATTATCAATaGCATAGGACAGCGTCGAGA +
Preference number: 4 (lower is better)
Translates to: AGPASVPCSTVRPTGITFAMDYQ*HRTASR
Trigger: TCTCGACGCTGTCCTATGCCATTGATAATCCATTGC...AAAAGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACATATATGAGGTCTACTaGGAACACTTCCATACCCAA +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDIYEVY*EHFHTQ
Trigger: TTGGGTATGGAAGTGTTCCCAGTAGACCTCATATAT...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACGTTTCCAAGGAAAATTaGCATCAGAGTGGAGATAAG +
Preference number: 4 (lower is better)
Translates to: PSITCWACFCPMQHCATDVSKEN*HQSGDK
Trigger: CTTATCTCCACTCTGATGCCAATTTTCCTTGGAAAC...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGTATTCGAGACAATTTaGCCTGATCATACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGVFETI*PDHTAP
Trigger: GGGAGCAGTATGATCAGGCCAAATTGTCTCGAATAC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGGGCTGGTCTTTTTCTaGGGCAAGTCCGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRGLVFF*GKSAQN
Trigger: ATTTTGGGCGGACTTGCCCCAGAAAAAGACCAGCCC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTTGTCGCCAAAGTTTCTaGAGGAAGTTGAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTCRQSF*RKLSTF
Trigger: AAAAGTGCTCAACTTCCTCCAGAAACTTTGGCGACA...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGCATAACTCCAGGTGGTaGTTGTCTGGCCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLHNSRW*LSGLIH
Trigger: ATGAATAAGGCCAGACAACCACCACCTGGAGTTATG...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTGTGCTGGTTTGCCTCTaGCCACACCTGAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCVLVCL*PHLRQV
Trigger: GACTTGTCTCAGGTGTGGCCAGAGGCAAACCAGCAC...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTTCTCAGTTTGATCTGTaGCCACAAGCAACGTATCTA +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTSQFDL*PQATYL
Trigger: TAGATACGTTGCTTGTGGCCACAGATCAAACTGAGA...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGCATTGTCCAAGGGTTTaGTGGCCTAAAAACCACACT +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLHCPRV*WPKNHT
Trigger: AGTGTGGTTTTTAGGCCACCAAACCCTTGGACAATG...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGCCAAATTCTGGAGTGGTAGCTGTACTGTaGCTGTGGTGGAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: HSKRDSDPQCPSPQPNSGVVAVL*LWWNRG
Trigger: GCCACGGTTCCACCACAGCCACAGTACAGCTACCAC...TCCAGAATTTGGCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGATTCAGAGTAATGTGTaGTGCCAAGCCCGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQIQSNV*CQARKG
Trigger: TCCCTTGCGGGCTTGGCACCACACATTACTCTGAAT...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTACACTGCTTCAACTGTaGATGGGCCTGAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESTLLQL*MGLKQG
Trigger: CCCTTGTTTCAGGCCCATCCACAGTTGAAGCAGTGT...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGATGGACCAGCTCCTaGACAGCCCGTTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELGWTSS*TARSIA
Trigger: GGCAATTGAACGGGCTGTCCAGGAGCTGGTCCATCC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGGCTAAAAATCCCGTaGGCTGACTTAAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLGLKIP*ADLSHL
Trigger: CAAATGACTTAAGTCAGCCCACGGGATTTTTAGCCC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGCTTGCTTCATGGGCTaGGCTAAAAATCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LDGFRIGLCKKVQHGATEACFMG*AKNPVG
Trigger: GCCCACGGGATTTTTAGCCCAGCCCATGAAGCAAGC...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTGGTTGTGATAGCACTTaGCTCGGATCATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAGCDST*LGSWWD
Trigger: ATCCCACCATGATCCGAGCCAAGTGCTATCACAACC...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGTGAGTGTGGCTATTTaGGTACCGGAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESVSVAI*VPELIC
Trigger: GCAAATCAGCTCCGGTACCCAAATAGCCACACTCAC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTGGATGGCTTCCGTATTaGCCTCTGCAAAAAGGTACA +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPAGWLPY*PLQKGT
Trigger: TGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCC...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTGCAGTTTCGTCTAACTaGCACCTGTCCCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPAAVSSN*HLSLPL
Trigger: TAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGC...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTTTTGCTGGTGACTaGGGGGTACTGAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRAFAGD*GVLNAE
Trigger: TTCTGCATTCAGTACCCCTCAGTCACCAGCAAAAGC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTAAGTTGTTGTGGTTGTaGTGGGAGGGAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: MQFRLTGTCPFHYLLGLLKLLWL*WEGVLL
Trigger: CAGAAGAACTCCCTCCCATCACAACCACAACAACTT...AAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCAAAAATCCCGTGGGCTaGCTTAAGTCATTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGKNPVG*LKSFVG
Trigger: ACCTACAAATGACTTAAGTCAGCCCACGGGATTTTT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTATTGACTGCGCTAGGTaGAGATCATACTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPAIDCAR*RSYCCI
Trigger: TATGCAGCAGTATGATCTTCACCTAGCGCAGTCAAT...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp ATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTGCATTGCCTCTGGAATaGGCATTAATCCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: MQFRLTGTCPFHYLLGLLALPLE*ALILMR
Trigger: CCTCATGAGGATTAATGCTCATTCCAGAGGCAATGC...AAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTGCATTGCCTCTGGAATaGGCATTAATCCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAALPLE*ALILMR
Trigger: CCTCATGAGGATTAATGCTCATTCCAGAGGCAATGC...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTAAGTTTGGGCCTCCATaGGCACGATCAATCATTGCT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAKFGPP*ARSIIA
Trigger: AGCAATGATTGATCGTGCTCATGGAGGCCCAAACTT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGTCACGAGCAGTGCAATaGGTCGAACAAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLSRAVQ*VEQRHP
Trigger: TGGATGCCTTTGTTCGACTCATTGCACTGCTCGTGA...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGTTGGTGGCCTCCCCTaGGTGTTTCACGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEVGGLP*VFHEQC
Trigger: GCACTGCTCGTGAAACACTCAGGGGAGGCCACCAAC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGTTGGTGGCCTCCCCTaGGTGTTTCACGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSVGGLP*VFHEQC
Trigger: GCACTGCTCGTGAAACACTCAGGGGAGGCCACCAAC...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCAGGAAAGTGACTGGTaGTCGAGTTTTAAGATAGGA +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGQESDW*SSFKIG
Trigger: TCCTATCTTAAAACTCGATCACCAGTCACTTTCCTG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGATATCCATGTGTGCTaGGTGAGTGATGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQDIHVC*VSDGAH
Trigger: ATGAGCACCATCACTCACTCAGCACACATGGATATC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTACAGCATGGTGCAACTaGAGTAGTGAGTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRATAWCN*SSECGY
Trigger: ATAGCCACACTCACTACTTCAGTTGCACCATGCTGT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGTCTGATGGAAATCTTTaGCACTGCTTTTACCATCGC +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLSDGNL*HCFYHR
Trigger: GCGATGGTAAAAGCAGTGGCAAAGATTTCCATCAGA...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGTCATGGCGCAAGGTATaGCAAGAGGTGTTAATTTGT +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLSWRKV*QEVLIC
Trigger: ACAAATTAACACCTCTTGGCATACCTTGCGCCATGA...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTTCCAATACCACTGAATaGAGTGGTCTGATTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRASNTTE*SGLIGG
Trigger: ACCCCCAATCAGACCACTGCATTCAGTGGTATTGGA...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGATTCAGTCCAGAGGTaGCCAGTTTCCTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESDSVQR*PVSSVQ
Trigger: TTGTACAGAGGAAACTGGGCACCTCTGGACTGAATC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCAGCAAGAGGAGCTTTTaGTGGAACCTGGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GTSLCTCLGHSLHKAKKFSKRSF*WNLGLS
Trigger: GCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCT...GAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGAGCAAGAGGAGCTTTTaGTGGAACCTGGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSSKRSF*WNLGLS
Trigger: GCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTCCTTCCTGACTATTTaGTCACAAGTAGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRSFLTI*SQVVMA
Trigger: TGCCATGACTACTTGTGAGCAAATAGTCAGGAAGGA...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGTCCATCTCAGGGCCTaGTTTTTCTACTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQVHLRA*FFYCSL
Trigger: AAGACTGCAGTAGAAAAAGCAGGCCCTGAGATGGAC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTAGCTACATCATCTGTTaGCCAAGCTTGCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESSYIIC*PSLLHG
Trigger: CCCATGAAGCAAGCTTGGGCAACAGATGATGTAGCT...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTAGCTACATCATCTGTTaGCCAAGCTTGCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRASYIIC*PSLLHG
Trigger: CCCATGAAGCAAGCTTGGGCAACAGATGATGTAGCT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCCTCAGAAGATACTCTaGCTTCTCCCTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELPQKIL*LLPQAW
Trigger: CCAGGCCTGAGGGAGAAGGCAGAGTATCTTCTGAGG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTATGGTTTCCAACACATaGTCAGGTGCATTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPAMVSNT*SGALSS
Trigger: GGAACTCAATGCACCTGAGCATGTGTTGGAAACCAT...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp ATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTATACCTGTAGGTTGCTaGGCAGATCAGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: MQFRLTGTCPFHYLLGLLIPVGC*ADQTGK
Trigger: CTTTCCTGTCTGATCTGCGCAGCAACCTACAGGTAT...AAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTGCTCATTGAAGGTGTaGTGCCCTTGTTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESCSLKV*CPCCGC
Trigger: ACATCCACAACAAGGGCAGCACACCTTCAATGAGCA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCCTGCTTCTGTCCCATaGAGCACTGTGCGACCGACT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGPASVP*STVRPT
Trigger: AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGCCTGCTTCTGTCCCATaGAGCACTGTGCGACCGACT +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQPASVP*STVRPT
Trigger: AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGG...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCGTGCATGGCATCAGCTaGCTCTTCATTACAAGGTAC +
Preference number: 4 (lower is better)
Translates to: NVRRHGAMPSDKCMASAAVHGIS*LFITRY
Trigger: GTACCTTGTAATGAAGAGGCAGCTGATGCCATGCAC...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TCTGTGAGCCACTTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAGTCAAGATTCATTGCTaGTTGGGGCGGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SVSHLSSLRYSRREASAAVKIHC*LGRKQA
Trigger: CGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGAC...TGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGAGCACTTTACTCAGCTaGGCAAATAAGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQSTLLS*ANKWGA
Trigger: TGCACCCCACTTATTTGCCCAGCTGAGTAAAGTGCT...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGACGGGACAGCGTTCTTaGGGAAAATCTCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSTGQRS*GKSLRS
Trigger: GCTGCGCAGAGATTTTCCCCAAGAACGCTGTCCCGT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTATTGTCATCCTCTGGTaGTGCTTTCAGAATATCAGT +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTIVILW*CFQNIS
Trigger: ACTGATATTCTGAAAGCACCACCAGAGGATGACAAT...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCAATACCAGCATGTCTaGACAGTGTTTGATAGGGAA +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGQYQHV*TVFDRE
Trigger: TTCCCTATCAAACACTGTCCAGACATGCTGGTATTG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCAAAGTCATACACGCCTaGATAAAAGGCTCCCCATGC +
Preference number: 4 (lower is better)
Translates to: NVRRHGAMPSDKCMASAAKVIHA*IKGSPC
Trigger: GCATGGGGAGCCTTTTATCCAGGCGTGTATGACTTT...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCGAAGTTGAGCACTTTTaGGCTGGTCTTTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISEVEHF*AGLFLG
Trigger: CCCCAGAAAAAGACCAGCCCAAAAGTGCTCAACTTC...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGAAGAGGAGCTTTTGCTaGAACCTGGGCCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSKRSFC*NLGLSL
Trigger: CAGGCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCTCCTGGATATTTTCTaGGGGCTCCACAATTCTCTC +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQLLDIF*GLHNSL
Trigger: GAGAGAATTGTGGAGCCCCCAGAAAATATCCAGGAG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTCTCCTGGATATTTTCTaGGGGCTCCACAATTCTCTC +
Preference number: 4 (lower is better)
Translates to: MQFRLTGTCPFHYLLGLLLLDIF*GLHNSL
Trigger: GAGAGAATTGTGGAGCCCCCAGAAAATATCCAGGAG...AAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGTCCAAGGGTTTGGTaGCCTAAAAACCACACTACG +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISCPRVW*PKNHTT
Trigger: CGTAGTGTGGTTTTTAGGCCACCAAACCCTTGGACA...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TTGGTGAGAATCCGGGGAGCAATGTTAATTTCACTCAACATGTCCACCTGGCTGGTACTGTGGCTGTGGTaGAACCGTGGCTGTACAAGT +
Preference number: 4 (lower is better)
Translates to: LVRIRGAMLISLNMSTWLVLWLW*NRGCTS
Trigger: ACTTGTACAGCCACGGTTCCACCACAGCCACAGTAC...CAGCCAGGTGGACATGTTGAGTGAAATTAACATTGCTCCCCGGATTCTCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCTGTACTGTGGCTGTaGTGGAACCGTGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELAVLWL*WNRGCT
Trigger: TGTACAGCCACGGTTCCACCACAGCCACAGTACAGC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCAGCCTGATTTGCTCTaGCATCCGTTCAGCTTGATA +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAQPDLL*HPFSLI
Trigger: TATCAAGCTGAACGGATGCCAGAGCAAATCAGGCTG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGATCCAAGAGCAGCTATaGCATCCCGAGAGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLIQEQL*HPESFE
Trigger: CTCGAAACTCTCGGGATGCCATAGCTGCTCTTGGAT...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCCATCAGCACCACTTGTaGCATCTAGTAAGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: NVRRHGAMPSDKCMASAAHQHHL*HLVSPL
Trigger: TAGAGGGCTTACTAGATGCCACAAGTGGTGCTGATG...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGATTCCCAGGTTCATTaGATACCTGTAGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQDSQVH*IPVGCC
Trigger: GCAGCAACCTACAGGTATCCAATGAACCTGGGAATC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGGATGGCTTCCGTATTaGCCTCTGCAAAAAGGTACA +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESGWLPY*PLQKGT
Trigger: TGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGCACTGTGCGACCGACTaGAATAACTTTTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLHCATD*NNFSIS
Trigger: AGAAATCGAAAAGTTATTCCAGTCGGTCGCACAGTG...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGCAGTTTCGTCTAACTaGCACCTGTCCCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESAVSSN*HLSLPL
Trigger: TAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGGCCATTCATTCAGTaGGGTAATGGGGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISWPFIQ*GNGGEQ
Trigger: TTGTTCTCCCCCATTACCCCACTGAATGAATGGCCA...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTATGTCCACCAGGTAGCTaGTTTGAGACAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLCPPGS*FETRPA
Trigger: CGCTGGCCTTGTCTCAAATCAGCTACCTGGTGGACA...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGTGTCCACCAGGTAGCTaGTTTGAGACAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVCPPGS*FETRPA
Trigger: CGCTGGCCTTGTCTCAAATCAGCTACCTGGTGGACA...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCTTCTTGATTTCCACTaGCGTCTGCGTCAATGTAAG +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESLLDFH*RLRQCK
Trigger: CTTACATTGACGCAGACGTCAGTGGAAATCAAGAAG...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGATAAGTTGGCGAATTaGGGGAGACTGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGDKLAN*GRLSLP
Trigger: GGGCAGGGACAGTCTCCCTCAATTCGCCAACTTATC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCGAGACAATTTGGCCTaGTCATACTGCTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELRDNLA*SYCSPL
Trigger: GAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGCCACTTATCAAGTTTaGGGTATTCACGACGTGAAG +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQATYQV*GIHDVK
Trigger: CTTCACGTCGTGAATACCTCAAACTTGATAAGTGGC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGTGAGGGGCAGCTaGACCACCTATACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELGVRGS*TTYTKR
Trigger: TCTCTTAGTATAGGTGGTTCAGCTGCCCCTCACACC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAAAATGCTTTTGCTGGTaGCTGAGGGGTACTGAATGC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRKCFCW*LRGTEC
Trigger: GCATTCAGTACCCCTCAGTCACCAGCAAAAGCATTT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGTTGGATGTGGTGGATaGTTATATATTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGVGCGG*LYIRWK
Trigger: TTTCCAGCGAATATATAATCATCCACCACATCCAAC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTAACAGTGGTAGTTGTTaGGGTGGTTACCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRANSGSC*GGYHSA
Trigger: AGCACTATGGTAACCACCTCAACAACTACCACTGTT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAAGGGAATAGACATTaGTGTCGTGGTAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESQGNRH*CRGSCT
Trigger: AGTACAGCTACCACGACATCAATGTCTATTCCCTTG...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGCCCGTTCAATTGCCTaGCGCACACACTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNARSIA*RTHCFN
Trigger: GTTGAAGCAGTGTGTGCGTCAGGCAATTGAACGGGC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCATGGCAATCTTAATTaGTCGATCCACCACAGGATG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAHGNLN*SIHHRM
Trigger: CATCCTGTGGTGGATCGATCAATTAAGATTGCCATG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCACACCAACTTTCAGCCTaGTTTGCTCTGGCATCCGTT +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPHQLSA*FALASV
Trigger: AACGGATGCCAGAGCAAATCAGGCTGAAAGTTGGTG...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCAATTAGGCACCTTGTaGTCTGTTTGTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAQLGTL*SVCCTM
Trigger: CATGGTGCAACAAACAGATCACAAGGTGCCTAATTG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTGCATATTAACCAAATaGTTGCGAATTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRCILTK*LRISSS
Trigger: GGAGCTGCTAATTCGCAATCATTTGGTTAATATGCA...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCATCTGCCTCAGTAACATaGGCAACACTCCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASSASVT*ATLLSS
Trigger: GGATGAAAGGAGTGTTGCTCATGTTACTGAGGCAGA...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCCAAGAGAACTCTTGTaGTCTGTTCTTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQPRELL*SVLGWL
Trigger: AAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTCGAGTCAAGATTCATTaGTGGTTGGGGCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: WVPELICNCIQKEIATLSRVKIH*WLGRKQ
Trigger: CTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCG...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGAGGCAGCGTAATAAATaGCTGTCTGCCTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSRQRNK*LSASGP
Trigger: CGGTCCTGAGGCAGACAGGCATTTATTACGCTGCCT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TCTGTGAGCCACTTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGGCAGCGTAATAAATaGCTGTCTGCCTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: SVSHLSSLRYSRREASAARQRNK*LSASGP
Trigger: CGGTCCTGAGGCAGACAGGCATTTATTACGCTGCCT...TGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR GCA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTTTGACTTGCTCATACTaGCCAACCTCTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVLTCSY*PTSASL
Trigger: GAGGCTTGCAGAGGTTGGGCAGTATGAGCAAGTCAA...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTCTCATGTACCATTCTaGCATTGCATGCATGATAAG +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGSHVPF*HCMHDK
Trigger: CTTATCATGCATGCAATGGCAGAATGGTACATGAGA...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCTCCCTGCACAAGCTTaGAGACAGGCCAACATTGTC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELLPAQA*RQANIV
Trigger: GACAATGTTGGCCTGTCTGCAAGCTTGTGCAGGGAG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCTGAGAAACACTCCCTaGACAAGCTTGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELLRNTP*TSLQTG
Trigger: GCCTGTCTGCAAGCTTGTGCAGGGAGTGTTTCTCAG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATCCAATACCACTGAATaGAGTGGTCTGATTGGGGGT +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRSNTTE*SGLIGG
Trigger: ACCCCCAATCAGACCACTGCATTCAGTGGTATTGGA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAGCAAGAGGAGCTTTTaGTGGAACCTGGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQSKRSF*WNLGLS
Trigger: GCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAACTTTCAGCCTGATTTaGTCTGGCATCCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRTFSLI*SGIRSA
Trigger: AGCTGAACGGATGCCAGAGCAAATCAGGCTGAAAGT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCATGGCATGTAGATGTTaGTCCAGTTCTGTAATACAC +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGMACRC*SSSVIH
Trigger: GTGTATTACAGAACTGGAGCAACATCTACATGCCAT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCCTCAGAAGATACTCTaGCTTCTCCCTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNPQKIL*LLPQAW
Trigger: CCAGGCCTGAGGGAGAAGGCAGAGTATCTTCTGAGG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTGTCTTCAGTATTCCTTaGTGGTGCATCTGTCCAACA +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAVFSIP*WCICPT
Trigger: TGTTGGACAGATGCACCAGCAAGGAATACTGAAGAC...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGTCTTCAGTATTCCTTaGTGGTGCATCTGTCCAACA +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQVFSIP*WCICPT
Trigger: TGTTGGACAGATGCACCAGCAAGGAATACTGAAGAC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGTGTTTCACGAGCAGTaGAATGAGTCGAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRVFHEQ*NESNKG
Trigger: GCCTTTGTTCGACTCATTGCACTGCTCGTGAAACAC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCAACACATGCTCAGGTaGATTGAGTTCCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQQHMLR*IEFQEK
Trigger: CTTCTCTTGGAACTCAATGCACCTGAGCATGTGTTG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTCAACACATGCTCAGGTaGATTGAGTTCCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: MQFRLTGTCPFHYLLGLLQHMLR*IEFQEK
Trigger: CTTCTCTTGGAACTCAATGCACCTGAGCATGTGTTG...AAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCTGCTGTGGCGTATGTaGCAGCATTCTTGCAATAAA +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRALLWRM*QHSCNK
Trigger: TTTATTGCAAGAATGCTGGCACATACGCCACAGCAG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGTCCCTTCCATTACTTaGTGGGCCTGCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQVPSIT*WACFCP
Trigger: GGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGTCCCTTCCATTACTTaGTGGGCCTGCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNVPSIT*WACFCP
Trigger: GGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTTAAACTTTGGAACGTaGCCACATAAGACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESLNFGT*PHKTGG
Trigger: GCCTCCTGTCTTATGTGGGCACGTTCCAAAGTTTAA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGGTCAATAACAAAGCTCTGTTCTGAAACATaGCACCTCAGGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SSLRYSRREASAARSITKLCSET*HLRRLR
Trigger: CCGGAGCCGCCTGAGGTGCCATGTTTCAGAACAGAG...CTTTGTTATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAGTCAAGATTCATTGCTaGTTGGGGCGGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILVKIHC*LGRKQA
Trigger: CGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGAC...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGTCAAGATTCATTGCTaGTTGGGGCGGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLVKIHC*LGRKQA
Trigger: CGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGAC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTGTATTTCCTGCTGGCTaGCTCGGTAATTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAVFPAG*LGNFSW
Trigger: CCAAGAAAAATTACCGAGCCAGCCAGCAGGAAATAC...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAAGCACTTTACTCAGCTaGGCAAATAAGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRSTLLS*ANKWGA
Trigger: TGCACCCCACTTATTTGCCCAGCTGAGTAAAGTGCT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTACGGGACAGCGTTCTTaGGGAAAATCTCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGTGQRS*GKSLRS
Trigger: GCTGCGCAGAGATTTTCCCCAAGAACGCTGTCCCGT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAAAAACCCTTGCAACCTaGGCAGCTGTGACCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILKTLAT*AAVTSR
Trigger: TCGGGAGGTCACAGCTGCCCAGGTTGCAAGGGTTTT...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAAAACCCTTGCAACCTaGGCAGCTGTGACCTCCCGA +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQKTLAT*AAVTSR
Trigger: TCGGGAGGTCACAGCTGCCCAGGTTGCAAGGGTTTT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGGCTGGTCTTTTTCTaGGGCAAGTCCGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTGLVFF*GKSAQN
Trigger: ATTTTGGGCGGACTTGCCCCAGAAAAAGACCAGCCC...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAAAGAGGAGCTTTTGCTaGAACCTGGGCCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILKRSFC*NLGLSL
Trigger: CAGGCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTT...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAAGAGGAGCTTTTGCTaGAACCTGGGCCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQKRSFC*NLGLSL
Trigger: CAGGCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGAAAGCTGACTCCAGTTaGCCTGGTGACCGTAACCGT +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSKADSS*PGDRNR
Trigger: ACGGTTACGGTCACCAGGCCAACTGGAGTCAGCTTT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATGTCCAAGGGTTTGGTaGCCTAAAAACCACACTACG +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRCPRVW*PKNHTT
Trigger: CGTAGTGTGGTTTTTAGGCCACCAAACCCTTGGACA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCTGTGGTGGAACCGTaGCTGTACAAGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGAVVEP*LYKWCW
Trigger: CCAACACCACTTGTACAGCCACGGTTCCACCACAGC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTAAACAAGGGAATTGTTaGATTCAGAGTAATGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTKQGNC*IQSNVW
Trigger: CCACACATTACTCTGAATCCAACAATTCCCTTGTTT...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGGATGGACCAGCTCCTaGACAGCCCGTTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEGWTSS*TARSIA
Trigger: GGCAATTGAACGGGCTGTCCAGGAGCTGGTCCATCC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCTTGCTTCATGGGCTaGGCTAAAAATCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGACFMG*AKNPVG
Trigger: GCCCACGGGATTTTTAGCCCAGCCCATGAAGCAAGC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGCTTGCTTCATGGGCTaGGCTAAAAATCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNACFMG*AKNPVG
Trigger: GCCCACGGGATTTTTAGCCCAGCCCATGAAGCAAGC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCACCCTCTACAGCCTTTTaGAGCAATCCAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPPSTAF*SNPRAA
Trigger: AGCTGCTCTTGGATTGCTCCAAAAGGCTGTAGAGGG...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGACATCAGCACCACTTGTaGCATCTAGTAAGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRHQHHL*HLVSPL
Trigger: TAGAGGGCTTACTAGATGCCACAAGTGGTGCTGATG...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCTGGGGCAATCCTTCTaGAGCATTGCCTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSLGQSF*SIASGM
Trigger: CATTCCAGAGGCAATGCTCCAGAAGGATTGCCCCAG...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTACTACTTCCATCAGCTaGGGCAATCCTTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCTTSIS*GNPSGA
Trigger: TGCTCCAGAAGGATTGCCCCAGCTGATGGAAGTAGT...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGTCATTGCTTCATAGTTaGATCGCACTACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLSLLHS*IALLPS
Trigger: TGATGGAAGTAGTGCGATCCAACTATGAAGCAATGA...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCATGCAGAGAAAGCTTTaGTACTGTCGCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELMQRKL*YCRGQL
Trigger: CAGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCAT...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTTCAGTATTCCTTGCTaGTGCATCTGTCCAACAAAT +
Preference number: 4 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGFSIPC*CICPTN
Trigger: ATTTGTTGGACAGATGCACCAGCAAGGAATACTGAA...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTACCACCCCTTCTGCTGTaGCGTATGTGCCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLPPLLL*RMCQHS
Trigger: AGAATGCTGGCACATACGCCACAGCAGAAGGGGTGG...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCCACCCCTTCTGCTGTaGCGTATGTGCCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVPPLLL*RMCQHS
Trigger: AGAATGCTGGCACATACGCCACAGCAGAAGGGGTGG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCCTGGATACAATTAGGTaGGATCACATCACAGAACCC +
Preference number: 4 (lower is better)
Translates to: NVRRHGAMPSDKCMASAALDTIR*DHITEP
Trigger: GGGTTCTGTGATGTGATCCCACCTAATTGTATCCAG...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCTGGATACAATTAGGTaGGATCACATCACAGAACCC +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRALDTIR*DHITEP
Trigger: GGGTTCTGTGATGTGATCCCACCTAATTGTATCCAG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGATTCCCAGGTTCATTaGATACCTGTAGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRDSQVH*IPVGCC
Trigger: GCAGCAACCTACAGGTATCCAATGAACCTGGGAATC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTGTGGATGTGCGCAATaGCCTGAGTCCCGACATAGA +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSCGCAQ*PESRHR
Trigger: TCTATGTCGGGACTCAGGCCATTGCGCACATCCACA...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTAAGACCCCAAGGATGTaGCCTATTTACAATCAACCG +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAKTPRM*PIYNQP
Trigger: CGGTTGATTGTAAATAGGCCACATCCTTGGGGTCTT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCACCTGGCTGACATaGCGAAACCCCATCTCCACT +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNSTWLT*RNPIST
Trigger: AGTGGAGATGGGGTTTCGCCATGTCAGCCAGGTGGA...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CACTTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGGTCAATATGTCCACCAGGTAGCTaGTTTGAGACAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HLSSLRYSRREASAARSICPPGS*FETRPA
Trigger: CGCTGGCCTTGTCTCAAATCAGCTACCTGGTGGACA...TATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR TCA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAACAACCTGGGCAGCTGTaGCCTCCCGAACACCAAACT +
Preference number: 4 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMEQPGQL*PPEHQT
Trigger: AGTTTGGTGTTCGGGAGGTCACAGCTGCCCAGGTTG...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTTACTGTCACGAATTTaGAATCCAGGATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESLLSRI*NPGWSS
Trigger: ACTGGACCATCCTGGATTTCAAATTCGTGACAGTAA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGAGGTATTCACGACGTaGAGCAAGTGCAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLEVFTT*SKCSKV
Trigger: GACCTTGCTGCACTTGCTTCACGTCGTGAATACCTC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGGGTGTGAGGGGCAGCTaGACCACCTATACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVGVRGS*TTYTKR
Trigger: TCTCTTAGTATAGGTGGTTCAGCTGCCCCTCACACC...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGGGTCTGATTGGGGGTTaGAAGGGGTGGAAATGCTTT +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQGLIGG*KGWKCF
Trigger: AAAGCATTTCCACCCCTTTCAACCCCCAATCAGACC...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCTGAATGCAGTGGTCTaGTTGGGGGTTGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGLNAVV*LGVERG
Trigger: ACCCCTTTCAACCCCCAATCAGACCACTGCATTCAG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGTCCTCCAATACCACTaGATGCAGTGGTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTVLQYH*MQWSDW
Trigger: CCAATCAGACCACTGCATTCAGTGGTATTGGAGGAC...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTGTTGGATGTGGTGGATaGTTATATATTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPAVGCGG*LYIRWK
Trigger: TTTCCAGCGAATATATAATCATCCACCACATCCAAC...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTTGAATACAGGCTATaGAAGTTTGGCTCAATACTG +
Preference number: 4 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRFEYRL*KFGSIL
Trigger: CAGTATTGAGCCAAACTTTCATAGCCTGTATTCAAA...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGACATGGCAATCTTAATTaGTCGATCCACCACAGGATG +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRHGNLN*SIHHRM
Trigger: CATCCTGTGGTGGATCGATCAATTAAGATTGCCATG...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTTCTACTGCAGTCTTCTaGATAAAACAGCAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRASTAVF*IKQQAN
Trigger: GTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGA...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTAAAAATCCCGTGGGCTaGCTTAAGTCATTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESKNPVG*LKSFVG
Trigger: ACCTACAAATGACTTAAGTCAGCCCACGGGATTTTT...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCACAATTAGGCACCTTGTaGTCTGTTTGTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASQLGTL*SVCCTM
Trigger: CATGGTGCAACAAACAGATCACAAGGTGCCTAATTG...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAATTGACTGCGCTAGGTaGAGATCATACTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRIDCAR*RSYCCI
Trigger: TATGCAGCAGTATGATCTTCACCTAGCGCAGTCAAT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTAGGGTCATCATACTCTaGGGCTTGAGAGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: WVPELICNCIQKEIATLSRVIIL*GLRDPR
Trigger: TCTGGGATCTCTCAAGCCTCAGAGTATGATGACCCT...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGCCTGAGCACGGTAACTaGTTTCAACACACATTTCAG +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLPEHGN*FQHTFQ
Trigger: CTGAAATGTGTGTTGAAATCAGTTACCGTGCTCAGG...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTGTGTGCTGAGTGAGTaGTGGTGCTCATTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSCVLSE*WCSLKV
Trigger: CACCTTCAATGAGCACCATCACTCACTCAGCACACA...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTTTGGGTACCGGAGCTaGTTTGCAATTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISFGYRS*FAIAFK
Trigger: TTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAA...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTTTGGGTACCGGAGCTaGTTTGCAATTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESFGYRS*FAIAFK
Trigger: TTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTGTGAGACCTCTAGACTaGCACGTACAACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: WVPELICNCIQKEIATLSVRPLD*HVQQRC
Trigger: GCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCAC...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTGAGACCTCTAGACTaGCACGTACAACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELVRPLD*HVQQRC
Trigger: GCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCAC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCCGAGTCAAGATTCATTaGTGGTTGGGGCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFRVKIH*WLGRKQ
Trigger: CTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCG...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCGAGTCAAGATTCATTaGTGGTTGGGGCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNRVKIH*WLGRKQ
Trigger: CTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGTCTGCCTCAGGACCGTaGCGATTCACAATATGCTGT +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQSASGP*RFTICC
Trigger: ACAGCATATTGTGAATCGGCACGGTCCTGAGGCAGA...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAGGCAGCGTAATAAATaGCTGTCTGCCTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQRQRNK*LSASGP
Trigger: CGGTCCTGAGGCAGACAGGCATTTATTACGCTGCCT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGGCAGCGTAATAAATaGCTGTCTGCCTCAGGACCG +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVRQRNK*LSASGP
Trigger: CGGTCCTGAGGCAGACAGGCATTTATTACGCTGCCT...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCCCACTGAAATCCACATaGGAAAATAGGCAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISPLKST*ENRQRN
Trigger: ATTACGCTGCCTATTTTCGCATGTGGATTTCAGTGG...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCCACTGAAATCCACATaGGAAAATAGGCAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQPLKST*ENRQRN
Trigger: ATTACGCTGCCTATTTTCGCATGTGGATTTCAGTGG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAATTTCCACTGACGTCTaGGTCAATGTAAGAACGCAG +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASISTDV*VNVRTQ
Trigger: CTGCGTTCTTACATTGACGCAGACGTCAGTGGAAAT...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGATTTCCACTGACGTCTaGGTCAATGTAAGAACGCAG +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLISTDV*VNVRTQ
Trigger: CTGCGTTCTTACATTGACGCAGACGTCAGTGGAAAT...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCCCAAAGGCTCCCTTCTaGCCAAAGAGGAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSPKAPF*PKRRWE
Trigger: CTCCCATCTCCTCTTTGGGCAGAAGGGAGCCTTTGG...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTACATTCCATGTGTGTaGCTGTGCTCCATCACTTTT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQYIPCV*LCSITF
Trigger: AAAAGTGATGGAGCACAGGCACACACATGGAATGTA...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTTGACTTGCTCATACTaGCCAACCTCTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELLTCSY*PTSASL
Trigger: GAGGCTTGCAGAGGTTGGGCAGTATGAGCAAGTCAA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGAAGAGCTGTTTGACTTaGTCATACTGCCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLKSCLT*SYCPTS
Trigger: AGAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTT...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTTCATGGCGCAAGGTATaGCAAGAGGTGTTAATTTGT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRASWRKV*QEVLIC
Trigger: ACAAATTAACACCTCTTGGCATACCTTGCGCCATGA...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGTACCATTCTGCCATTaGATGCATGATAAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRVPFCH*MHDKLA
Trigger: CGCCAACTTATCATGCATGCAATGGCAGAATGGTAC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGCTCCCTGCACAAGCTTaGAGACAGGCCAACATTGTC +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQLPAQA*RQANIV
Trigger: GACAATGTTGGCCTGTCTGCAAGCTTGTGCAGGGAG...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCACTGAGGGGTACTGAATaGAGAACCCAAATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPLRGTE*RTQIWR
Trigger: CCTCCAAATTTGGGTTCTGCATTCAGTACCCCTCAG...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAGGGTCGTTATTCACTaGAGGGAGTCCAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGRVVIH*RESKST
Trigger: GGTGCTCTTGGACTCCCTGCAGTGAATAACGACCCT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAGGGTCGTTATTCACTaGAGGGAGTCCAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQRVVIH*RESKST
Trigger: GGTGCTCTTGGACTCCCTGCAGTGAATAACGACCCT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAGATTCAGTCCAGAGGTaGCCAGTTTCCTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPDSVQR*PVSSVQ
Trigger: TTGTACAGAGGAAACTGGGCACCTCTGGACTGAATC...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTGGATCCAAAAGGCTTaGGTAAGGCTTCAAGAACAT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQWIQKA*VRLQEH
Trigger: ATGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCA...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGACAGCCCGTTCAATTaGCTGACGCACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGDSPFN*LTHTLL
Trigger: AAGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATATCTGCGTCCTTCTTaGCTAGCATGTTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRYLRPS*LACFLS
Trigger: GCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTATGCCCGGCCATCCTaGAGAGCTTTTAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQYARPS*RAFRTK
Trigger: CTTGGTCCTAAAAGCTCTGCAGGATGGCCGGGCATA...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTAGCACGATCAATCATTaGTTCATAGTTGGATCGCAC +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRASTINH*FIVGSH
Trigger: GTGCGATCCAACTATGAAGCAATGATTGATCGTGCT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TTGGTGAGAATCCGGGGAGCAATGTTAATTTCACTCAACATGTCCACCTGGCTGGTGTTTCACGAGCAGTaGAATGAGTCGAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: LVRIRGAMLISLNMSTWLVFHEQ*NESNKG
Trigger: GCCTTTGTTCGACTCATTGCACTGCTCGTGAAACAC...CAGCCAGGTGGACATGTTGAGTGAAATTAACATTGCTCCCCGGATTCTCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCACTGCTGTGGCGTATGTaGCAGCATTCTTGCAATAAA +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASLLWRM*QHSCNK
Trigger: TTTATTGCAAGAATGCTGGCACATACGCCACAGCAG...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAACCTGCTTCTGTCCCATaGAGCACTGTGCGACCGACT +
Preference number: 4 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMEPASVP*STVRPT
Trigger: AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGG...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATTAAACTTTGGAACGTaGCCACATAAGACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRLNFGT*PHKTGG
Trigger: GCCTCCTGTCTTATGTGGGCACGTTCCAAAGTTTAA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTACGGGACAGCGTTCTTaGGGAAAATCTCTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TSAWHQLPLHYKVPVYVLTGQRS*GKSLRS
Trigger: GCTGCGCAGAGATTTTCCCCAAGAACGCTGTCCCGT...AAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp ATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTTCGATTGTCATCCTCTaGTGGTGCTTTCAGAATATC +
Preference number: 4 (lower is better)
Translates to: MQFRLTGTCPFHYLLGLLSIVIL*WCFQNI
Trigger: GATATTCTGAAAGCACCACCAGAGGATGACAATCGA...AAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTCGATTGTCATCCTCTaGTGGTGCTTTCAGAATATC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESSIVIL*WCFQNI
Trigger: GATATTCTGAAAGCACCACCAGAGGATGACAATCGA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTAAAGTCATACACGCCTaGATAAAAGGCTCCCCATGC +
Preference number: 4 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCKVIHA*IKGSPC
Trigger: GCATGGGGAGCCTTTTATCCAGGCGTGTATGACTTT...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGAAGTTGAGCACTTTTaGGCTGGTCTTTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LDGFRIGLCKKVQHGATEEVEHF*AGLFLG
Trigger: CCCCAGAAAAAGACCAGCCCAAAAGTGCTCAACTTC...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAGGAGGACGTCCTTTTaGCATAACTCCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQRRTSF*HNSRWW
Trigger: CCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGATCAACAGACATGGTTaGATGTGGTGGATGATTATA +
Preference number: 4 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLINRHG*MWWMII
Trigger: TATAATCATCCACCACATCCAACCATGTCTGTTGAT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCAACGATCTGAGAAATTaGCTGCAGCTTTATCAGAGG +
Preference number: 4 (lower is better)
Translates to: NVRRHGAMPSDKCMASAANDLRN*LQLYQR
Trigger: CCTCTGATAAAGCTGCAGCCAATTTCTCAGATCGTT...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTGGGAGGGAGTTCTTCTaGCTGCTTGACATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCGREFF*LLDIFL
Trigger: AAGAAAGATGTCAAGCAGCCAGAAGAACTCCCTCCC...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTAGTGGTGTTGGTAGCTaGTGTAGTAGAAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESSGVGS*CSRSCC
Trigger: ACAACAACTTCTACTACACCAGCTACCAACACCACT...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTGCTGTGGTGGAACCGTaGCTGTACAAGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NQPFQENSCDLFLDGFRIAVVEP*LYKWCW
Trigger: CCAACACCACTTGTACAGCCACGGTTCCACCACAGC...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGCTGTGGTGGAACCGTaGCTGTACAAGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEAVVEP*LYKWCW
Trigger: CCAACACCACTTGTACAGCCACGGTTCCACCACAGC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACACTGCTTCAACTGTaGATGGGCCTGAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQTLLQL*MGLKQG
Trigger: CCCTTGTTTCAGGCCCATCCACAGTTGAAGCAGTGT...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCCCAAGCTTGCTTCATaGGCTGGGCTAAAAATCCCG +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGPKLAS*AGLKIP
Trigger: CGGGATTTTTAGCCCAGCCCATGAAGCAAGCTTGGG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTCCCTCTACAGCCTTTTaGAGCAATCCAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTPSTAF*SNPRAA
Trigger: AGCTGCTCTTGGATTGCTCCAAAAGGCTGTAGAGGG...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCATCAGCACCACTTGTaGCATCTAGTAAGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCHQHHL*HLVSPL
Trigger: TAGAGGGCTTACTAGATGCCACAAGTGGTGCTGATG...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCCTGGGGCAATCCTTCTaGAGCATTGCCTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFLGQSF*SIASGM
Trigger: CATTCCAGAGGCAATGCTCCAGAAGGATTGCCCCAG...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAATGCATCATAAAGTTTaGGCCTCCATGAGCACGATC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRMHHKV*ASMSTI
Trigger: GATCGTGCTCATGGAGGCCCAAACTTTATGATGCAT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAATGCAGAGAAAGCTTTaGTACTGTCGCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILMQRKL*YCRGQL
Trigger: CAGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCAT...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTGGCTCGGATCATGGTaGGATTGGCAGCAGGATTGT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGWLGSW*DWQQDC
Trigger: ACAATCCTGCTGCCAATCCCACCATGATCCGAGCCA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTACTTGGCTCGGATCATaGTGGGATTGGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGTWLGS*WDWQQD
Trigger: ATCCTGCTGCCAATCCCACCATGATCCGAGCCAAGT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGGAGCCTCATGTTTCTTaGAAAGGCACTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLEPHVS*KGTQDQ
Trigger: TTGATCCTGAGTGCCTTTCCAAGAAACATGAGGCTC...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTGTGGATGTGCGCAATaGCCTGAGTCCCGACATAGA +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNCGCAQ*PESRHR
Trigger: TCTATGTCGGGACTCAGGCCATTGCGCACATCCACA...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGCCAAATTCTGGAGTGAGTGTGGCTATTTaGGTACCGGAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: HSKRDSDPQCPSPQPNSGVSVAI*VPELIC
Trigger: GCAAATCAGCTCCGGTACCCAAATAGCCACACTCAC...TCCAGAATTTGGCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACTTTTCCAGAACTTAAACGCTaGGTTTTTAATCAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: AGPASVPCSTVRPTGITFPELKR*VFNQLN
Trigger: ATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGG...AAAAGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGTACTTTGCTTAATTTaGGCACTTTACTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRVLCLI*ALYSAG
Trigger: CCCAGCTGAGTAAAGTGCTCAAATTAAGCAAAGTAC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGTGCAGCAAGGTCAATAACAAAGGCAAATGGAGTACCATTTAGCAGCATTGACGAGGTATTCACGACGTaGAGCAAGTGCAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SAARSITKANGVPFSSIDEVFTT*SKCSKV
Trigger: GACCTTGCTGCACTTGCTTCACGTCGTGAATACCTC...GTCAATGCTGCTAAATGGTACTCCATTTGCCTTTGTTATTGACCTTGCTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR TCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGAGGTATTCACGACGTaGAGCAAGTGCAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEEVFTT*SKCSKV
Trigger: GACCTTGCTGCACTTGCTTCACGTCGTGAATACCTC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTTCTGATAGCTCCTaGGAAACACTCCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSVSDSS*ETLPAQ
Trigger: TTGTGCAGGGAGTGTTTCTCAGGAGCTATCAGAAAC...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGTCCTCCAATACCACTaGATGCAGTGGTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQVLQYH*MQWSDW
Trigger: CCAATCAGACCACTGCATTCAGTGGTATTGGAGGAC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGTCCTCCAATACCACTaGATGCAGTGGTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLVLQYH*MQWSDW
Trigger: CCAATCAGACCACTGCATTCAGTGGTATTGGAGGAC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGGAAATTGCATAAAGTaGCTGATAGAAGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESGNCIK*LIEAKC
Trigger: GCATTTGGCTTCTATCAGTCACTTTATGCAATTTCC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAACAATTCTCTCAGTTTaGTCTGTGGCCACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPTILSV*SVATSN
Trigger: GTTGCTTGTGGCCACAGATCAAACTGAGAGAATTGT...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCATAACCAGATACTGTaGAACCCAAGGCATAAATTC +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAHNQIL*NPRHKF
Trigger: GAATTTATGCCTTGGGTTTCACAGTATCTGGTTATG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCATAACCAGATACTGTaGAACCCAAGGCATAAATTC +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESHNQIL*NPRHKF
Trigger: GAATTTATGCCTTGGGTTTCACAGTATCTGGTTATG...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCGTGTCAAGGAAGTTTaGATACAGGCTATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRARVKEV*IQAMKV
Trigger: AACTTTCATAGCCTGTATTCAAACTTCCTTGACACG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCAAGTTGTTGTGGTTGTaGTGGGAGGGAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GTSLCTCLGHSLHKAKKFKLLWL*WEGVLL
Trigger: CAGAAGAACTCCCTCCCATCACAACCACAACAACTT...GAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGAACTGTGGATGGGCCTaGAACAAGGGAATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQNCGWA*NKGIVG
Trigger: TCCAACAATTCCCTTGTTTCAGGCCCATCCACAGTT...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAAGGGTCATCATACTCTaGGGCTTGAGAGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILRVIIL*GLRDPR
Trigger: TCTGGGATCTCTCAAGCCTCAGAGTATGATGACCCT...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACAGGGTCATCATACTCTaGGGCTTGAGAGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNRVIIL*GLRDPR
Trigger: TCTGGGATCTCTCAAGCCTCAGAGTATGATGACCCT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCGAAAGAACCTTGTTATaGGATCATCGGTCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISERTLL*DHRSSV
Trigger: TACTGAAGACCGATGATCTCATAACAAGGTTCTTTC...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCACAGCATGGTGCAACTaGAGTAGTGAGTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELTAWCN*SSECGY
Trigger: ATAGCCACACTCACTACTTCAGTTGCACCATGCTGT...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGTGAGACCTCTAGACTaGCACGTACAACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLVRPLD*HVQQRC
Trigger: GCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCAC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTCTTCAGTCAGTTTATaGACTCGGTGCAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSSSVSL*TRCSET
Trigger: GGTCTCACTGCACCGAGTTCATAAACTGACTGAAGA...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTCTGCCTCAGGACCGTaGCGATTCACAATATGCTGT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGSASGP*RFTICC
Trigger: ACAGCATATTGTGAATCGGCACGGTCCTGAGGCAGA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGTACATTCCATGTGTGTaGCTGTGCTCCATCACTTTT +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLYIPCV*LCSITF
Trigger: AAAAGTGATGGAGCACAGGCACACACATGGAATGTA...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAAAGAGCTGTTTGACTTaGTCATACTGCCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPKSCLT*SYCPTS
Trigger: AGAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTT...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCATTCTGCCATTGCATaGATGATAAGTTGGCGAATT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQHSAIA*MISWRI
Trigger: AATTCGCCAACTTATCATGCATGCAATGGCAGAATG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAACTGAGAAACACTCCCTaGACAAGCTTGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKLRNTP*TSLQTG
Trigger: GCCTGTCTGCAAGCTTGTGCAGGGAGTGTTTCTCAG...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTCCAATACCACTGAATaGAGTGGTCTGATTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSSNTTE*SGLIGG
Trigger: ACCCCCAATCAGACCACTGCATTCAGTGGTATTGGA...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCAGAGTAATGTGTGGTaGCAAGCCCGCAAGGGAATA +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVQSNVW*QARKGI
Trigger: TATTCCCTTGCGGGCTTGGCACCACACATTACTCTG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATCCTTCCTGACTATTTaGTCACAAGTAGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRSFLTI*SQVVMA
Trigger: TGCCATGACTACTTGTGAGCAAATAGTCAGGAAGGA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGCCAGGAACATTGCGTaGAAACTCTTCGTAAACAGC +
Preference number: 4 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTARNIA*KLFVNS
Trigger: GCTGTTTACGAAGAGTTTGCACGCAATGTTCCTGGC...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGTGTGGAACAGATCTaGCTCAGTAACATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTGVEQI*LSNMSN
Trigger: GTTGCTCATGTTACTGAGGCAGATCTGTTCCACACC...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCCATCTGTCCAACAAATaGAGAGAAAGCTTTGGTACT +
Preference number: 4 (lower is better)
Translates to: QECQKTWSYALRQVHGISHLSNK*RESFGT
Trigger: AGTACCAAAGCTTTCTCTGCATTTGTTGGACAGATG...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGTCTTCAGTATTCCTTaGTGGTGCATCTGTCCAACA +
Preference number: 4 (lower is better)
Translates to: LDGFRIGLCKKVQHGATEVFSIP*WCICPT
Trigger: TGTTGGACAGATGCACCAGCAAGGAATACTGAAGAC...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCATGTGCCAGCATTCTTaGAATAAATATCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: NVRRHGAMPSDKCMASAAMCQHS*NKYPMG
Trigger: TCCCATCGGATATTTATTGCAAGAATGCTGGCACAT...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTGGATACCTGTAGGTTaGTGCGCAGATCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGWIPVG*CADQTG
Trigger: TCCTGTCTGATCTGCGCAGCAACCTACAGGTATCCA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTATCATTGAAGGTGTGCTaGCCTTGTTGTGGATGTGCG +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILSLKVC*PCCGCA
Trigger: CGCACATCCACAACAAGGGCAGCACACCTTCAATGA...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCGTCGAGATAAAATTTaGCTTTGTAATCAGCAACGC +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQRRDKI*LCNQQR
Trigger: GCGTTGCTGATTACAAAGCCAAATTTTATCTCGACG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTTTCTGTTTGATAAACTaGGCAGCGAAACCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAFCLIN*AAKPLR
Trigger: TCTTAGAGGTTTCGCTGCCCAGTTTATCAAACAGAA...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCTTTCAGAATATCAGTaGCAACAGTATGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESLSEYQ*QQYDRD
Trigger: ATCCCTGTCATACTGTTGCCACTGATATTCTGAAAG...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TCTGTGAGCCACTTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAAAGGCCTTCAAGTCCTaGGCCACATCAAGTATTCGA +
Preference number: 4 (lower is better)
Translates to: SVSHLSSLRYSRREASAAKAFKS*ATSSIR
Trigger: TCGAATACTTGATGTGGCCCAGGACTTGAAGGCCTT...TGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGGGCTGGTCTTTTTCTaGGGCAAGTCCGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEGLVFF*GKSAQN
Trigger: ATTTTGGGCGGACTTGCCCCAGAAAAAGACCAGCCC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCATGTCGCCAAAGTTTCTaGAGGAAGTTGAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASCRQSF*RKLSTF
Trigger: AAAAGTGCTCAACTTCCTCCAGAAACTTTGGCGACA...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTTGGCATAACTCCAGGTaGTGGTTGTCTGGCCTTATT +
Preference number: 4 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTWHNSR*WLSGLI
Trigger: AATAAGGCCAGACAACCACCACCTGGAGTTATGCCA...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTGGCATAACTCCAGGTaGTGGTTGTCTGGCCTTATT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELWHNSR*WLSGLI
Trigger: AATAAGGCCAGACAACCACCACCTGGAGTTATGCCA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAAGGAGGACGTCCTTTTaGCATAACTCCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKRRTSF*HNSRWW
Trigger: CCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCT...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATGCAGAACCCAAATTTaGAGGAAAACCCTGCATACT +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRCRTQI*RKTLHT
Trigger: AGTATGCAGGGTTTTCCTCCAAATTTGGGTTCTGCA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGGTGCTGGTTTGCCTCTaGCCACACCTGAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: KMVQMQSALEYVWVETKWVLVCL*PHLRQV
Trigger: GACTTGTCTCAGGTGTGGCCAGAGGCAAACCAGCAC...CCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCTCTTTACTAAAGTGCTaGTTTGCCTCTGGCCACACC +
Preference number: 4 (lower is better)
Translates to: GTSLCTCLGHSLHKAKKFSLLKC*FASGHT
Trigger: GGTGTGGCCAGAGGCAAACCAGCACTTTAGTAAAGA...GAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTCTTTACTAAAGTGCTaGTTTGCCTCTGGCCACACC +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSSLLKC*FASGHT
Trigger: GGTGTGGCCAGAGGCAAACCAGCACTTTAGTAAAGA...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATCTCAGTTTGATCTGTaGCCACAAGCAACGTATCTA +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRSQFDL*PQATYL
Trigger: TAGATACGTTGCTTGTGGCCACAGATCAAACTGAGA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCTCCTGGATATTTTCTaGGGGCTCCACAATTCTCTC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELLLDIF*GLHNSL
Trigger: GAGAGAATTGTGGAGCCCCCAGAAAATATCCAGGAG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGGGGAGGGAGTTCTTCTaGCTGCTTGACATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQGREFF*LLDIFL
Trigger: AAGAAAGATGTCAAGCAGCCAGAAGAACTCCCTCCC...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAAGTGGTGTTGGTAGCTaGTGTAGTAGAAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASSGVGS*CSRSCC
Trigger: ACAACAACTTCTACTACACCAGCTACCAACACCACT...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGAGTGGTGTTGGTAGCTaGTGTAGTAGAAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLSGVGS*CSRSCC
Trigger: ACAACAACTTCTACTACACCAGCTACCAACACCACT...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp ACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGTACTGTGGCTGTGGTaGAACCGTGGCTGTACAAGT +
Preference number: 4 (lower is better)
Translates to: TSAWHQLPLHYKVPVYVLVLWLW*NRGCTS
Trigger: ACTTGTACAGCCACGGTTCCACCACAGCCACAGTAC...AAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAATTCAGAGTAATGTGTaGTGCCAAGCCCGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLIQSNV*CQARKG
Trigger: TCCCTTGCGGGCTTGGCACCACACATTACTCTGAAT...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGATTCAGAGTAATGTGTaGTGCCAAGCCCGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQIQSNV*CQARKG
Trigger: TCCCTTGCGGGCTTGGCACCACACATTACTCTGAAT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTCAGCCTGATTTGCTCTaGCATCCGTTCAGCTTGATA +
Preference number: 4 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTQPDLL*HPFSLI
Trigger: TATCAAGCTGAACGGATGCCAGAGCAAATCAGGCTG...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTAACAGCCAACTGCTTTaGGTCCACACCACCAACTTT +
Preference number: 4 (lower is better)
Translates to: WVPELICNCIQKEIATLSNSQLL*VHTTNF
Trigger: AAAGTTGGTGGTGTGGACCCAAAGCAGTTGGCTGTT...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGAACAGCCAACTGCTTTaGGTCCACACCACCAACTTT +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSNSQLL*VHTTNF
Trigger: AAAGTTGGTGGTGTGGACCCAAAGCAGTTGGCTGTT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACATCCAAGAGCAGCTATaGCATCCCGAGAGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNIQEQL*HPESFE
Trigger: CTCGAAACTCTCGGGATGCCATAGCTGCTCTTGGAT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCCCTCTACAGCCTTTTaGAGCAATCCAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNPSTAF*SNPRAA
Trigger: AGCTGCTCTTGGATTGCTCCAAAAGGCTGTAGAGGG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAAGGGTTTCAATGGTGTaGAACAGATCTGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPRVSMV*NRSASV
Trigger: TACTGAGGCAGATCTGTTCCACACCATTGAAACCCT...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACACTACTTCCATCAGCTaGGGCAATCCTTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNTTSIS*GNPSGA
Trigger: TGCTCCAGAAGGATTGCCCCAGCTGATGGAAGTAGT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTCATTGCTTCATAGTTaGATCGCACTACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQSLLHS*IALLPS
Trigger: TGATGGAAGTAGTGCGATCCAACTATGAAGCAATGA...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAATGTGGATGTGCGCAATaGCCTGAGTCCCGACATAGA +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKCGCAQ*PESRHR
Trigger: TCTATGTCGGGACTCAGGCCATTGCGCACATCCACA...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTCCTTCCATTACTTGCTaGGCCTGCTTCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: NQPFQENSCDLFLDGFRIPSITC*ACFCPM
Trigger: CATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGATCCCAACAGTAGTTaGGGCAGATACCCACAAACC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGDPNSS*GRYPQT
Trigger: GGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGATCCCAACAGTAGTTaGGGCAGATACCCACAAACC +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLDPNSS*GRYPQT
Trigger: GGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCCTCAGACAAGTGCATaGCATCAGCTGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNPQTSA*HQLPLH
Trigger: ATGAAGAGGCAGCTGATGCCATGCACTTGTCTGAGG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCACCCTTCCCATGTTCCTaGACATATCCAATTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPPFPCS*TYPILA
Trigger: TGCTAGAATTGGATATGTCCAGGAACATGGGAAGGG...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACCTCAACATGTCCACCTaGCTGACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINLNMST*LTWRNP
Trigger: GGGGTTTCGCCATGTCAGCCAGGTGGACATGTTGAG...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CAA 72 bp GAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATaGCATTCAAAAAGAGATAGCGACCCTCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ECGYLGTGADLQ*HSKRDSDPQCP
Trigger: TGGACACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
3UTR CAA 72 bp AGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATaGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: RTLVICSWMASV*ASAKRYSMVQL
Trigger: CAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGTCTGTTAATCCTGAATaGGTTCGAGCCATCATTCCC +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQSVNPE*VRAIIP
Trigger: GGGAATGATGGCTCGAACTCATTCAGGATTAACAGA...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAATTACTGTCACGAATTTaGAATCCAGGATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LDGFRIGLCKKVQHGATELLSRI*NPGWSS
Trigger: ACTGGACCATCCTGGATTTCAAATTCGTGACAGTAA...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp TTGGTGAGAATCCGGGGAGCAATGTTAATTTCACTCAACATGTCCACCTGGCTGTTTATAAGGGAATGTTaGATGAAGGAGAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LVRIRGAMLISLNMSTWLFIREC*MKESWP
Trigger: AGGCCAGCTCTCCTTCATTCAACATTCCCTTATAAA...CAGCCAGGTGGACATGTTGAGTGAAATTAACATTGCTCCCCGGATTCTCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTGTTTCTGGAGGAAGTTaGGCACTTTTGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: NQPFQENSCDLFLDGFRIVSGGS*ALLGWS
Trigger: AGACCAGCCCAAAAGTGCTCAACTTCCTCCAGAAAC...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGCAAGAGGGTCAATCTaGACAGGAGAAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQARGSI*TGEMAS
Trigger: AGATGCCATTTCTCCTGTTCAGATTGACCCTCTTGC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGCAAGAGGGTCAATCTaGACAGGAGAAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLARGSI*TGEMAS
Trigger: AGATGCCATTTCTCCTGTTCAGATTGACCCTCTTGC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGTGACTGAGGGGTACTaGATGCAGAACCCAAATTTG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQVTEGY*MQNPNL
Trigger: CAAATTTGGGTTCTGCATTCAGTACCCCTCAGTCAC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTGGTCTGATTGGGGGTTaGAAGGGGTGGAAATGCTTT +
Preference number: 4 (lower is better)
Translates to: NQPFQENSCDLFLDGFRIGLIGG*KGWKCF
Trigger: AAAGCATTTCCACCCCTTTCAACCCCCAATCAGACC...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAATGCTGGAATGTAGGCTaGTTCAGTCCAGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAECWNVG*FSPEVP
Trigger: GGGCACCTCTGGACTGAATCAGCCTACATTCCAGCA...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACGCCTCTGGCCACACCTaGGACAAGTCCGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHASGHT*DKSEGF
Trigger: GAAACCTTCGGACTTGTCTCAGGTGTGGCCAGAGGC...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGACAGGTTTTAGCTCATTaGTGTCTAATGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRQVLAH*CLMQGS
Trigger: AGAACCTTGCATTAGACATCAATGAGCTAAAACCTG...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAACTGTGGATGGGCCTaGAACAAGGGAATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGNCGWA*NKGIVG
Trigger: TCCAACAATTCCCTTGTTTCAGGCCCATCCACAGTT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TTGGTGAGAATCCGGGGAGCAATGTTAATTTCACTCAACATGTCCACCTGGCTGGGCATCCGTTCAGCTTaGTATGTTAAAACAACAGGA +
Preference number: 4 (lower is better)
Translates to: LVRIRGAMLISLNMSTWLGIRSA*YVKTTG
Trigger: TCCTGTTGTTTTAACATATCAAGCTGAACGGATGCC...CAGCCAGGTGGACATGTTGAGTGAAATTAACATTGCTCCCCGGATTCTCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAAGTTTGGGCCTCCATaGGCACGATCAATCATTGCT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGKFGPP*ARSIIA
Trigger: AGCAATGATTGATCGTGCTCATGGAGGCCCAAACTT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCATACTCTGAGGCTTaGGAGATCCCAGAATGCATC +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNSYSEA*EIPECI
Trigger: GATGCATTCTGGGATCTCTCAAGCCTCAGAGTATGA...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGCCTGAGCACGGTAACTaGTTTCAACACACATTTCAG +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQPEHGN*FQHTFQ
Trigger: CTGAAATGTGTGTTGAAATCAGTTACCGTGCTCAGG...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTCAGGAAAGTGACTGGTaGTCGAGTTTTAAGATAGGA +
Preference number: 4 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVQESDW*SSFKIG
Trigger: TCCTATCTTAAAACTCGATCACCAGTCACTTTCCTG...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGATATCCATGTGTGCTaGGTGAGTGATGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQDIHVC*VSDGAH
Trigger: ATGAGCACCATCACTCACTCAGCACACATGGATATC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAACAGCATGGTGCAACTaGAGTAGTGAGTGTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILTAWCN*SSECGY
Trigger: ATAGCCACACTCACTACTTCAGTTGCACCATGCTGT...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTCTTCAGTCAGTTTATaGACTCGGTGCAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGSSVSL*TRCSET
Trigger: GGTCTCACTGCACCGAGTTCATAAACTGACTGAAGA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGGTCAATAACACGAGTCAAGATTCATTaGTGGTTGGGGCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSSLRYSRREASAARSITRVKIH*WLGRKQ
Trigger: CTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCG...TGTTATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR GCA 90 bp TCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGGTCAATAACAAAGTCTGCCTCAGGACCGTaGCGATTCACAATATGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLRYSRREASAARSITKSASGP*RFTICC
Trigger: ACAGCATATTGTGAATCGGCACGGTCCTGAGGCAGA...CTTTGTTATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR GCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATACATTCCCAAAACCCTTaGAACCTGGGCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIHSQNP*NLGSCD
Trigger: GTCACAGCTGCCCAGGTTGCAAGGGTTTTGGGAATG...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATACACTCCAGATCCCACTaGCCGGAGCAGAAATACTCT +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIHSRSH*PEQKYS
Trigger: AGAGTATTTCTGCTCCGGGCAGTGGGATCTGGAGTG...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTACCATTCTGCCATTaGATGCATGATAAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELVPFCH*MHDKLA
Trigger: CGCCAACTTATCATGCATGCAATGGCAGAATGGTAC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTGGAGGATCTCTAGACTaGTGTCCATACTCAATATAC +
Preference number: 4 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVGGSLD*CPYSIY
Trigger: GTATATTGAGTATGGACAGCAGTCTAGAGATCCTCC...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGACTAATGCAAGGTTCTTaGAGAGAACCTCGATTTCAA +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRLMQGS*REPRFQ
Trigger: TTGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAG...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGTCCATCTCAGGGCCTaGTTTTTCTACTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQVHLRA*FFYCSL
Trigger: AAGACTGCAGTAGAAAAAGCAGGCCCTGAGATGGAC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTATCTGCGTCCTTCTTaGCTAGCATGTTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKYLRPS*LACFLS
Trigger: GCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATA...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGCCAGGAACATTGCGTaGAAACTCTTCGTAAACAGC +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLARNIA*KLFVNS
Trigger: GCTGTTTACGAAGAGTTTGCACGCAATGTTCCTGGC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAGCTACATCATCTGTTaGCCAAGCTTGCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQSYIIC*PSLLHG
Trigger: CCCATGAAGCAAGCTTGGGCAACAGATGATGTAGCT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAATGGCATGTAGATGTTaGTCCAGTTCTGTAATACAC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRMACRC*SSSVIH
Trigger: GTGTATTACAGAACTGGAGCAACATCTACATGCCAT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAATATGCCCGGCCATCCTaGAGAGCTTTTAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMEYARPS*RAFRTK
Trigger: CTTGGTCCTAAAAGCTCTGCAGGATGGCCGGGCATA...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAAGCACGATCAATCATTaGTTCATAGTTGGATCGCAC +
Preference number: 4 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPSTINH*FIVGSH
Trigger: GTGCGATCCAACTATGAAGCAATGATTGATCGTGCT...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCATGGTTTCCAACACATaGTCAGGTGCATTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELMVSNT*SGALSS
Trigger: GGAACTCAATGCACCTGAGCATGTGTTGGAAACCAT...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACATACCTGTAGGTTGCTaGGCAGATCAGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNIPVGC*ADQTGK
Trigger: CTTTCCTGTCTGATCTGCGCAGCAACCTACAGGTAT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGGACATAGAGCACCAGTaGATTGATGAGCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVDIEHQ*IDELEV
Trigger: AACCTCCAGCTCATCAATGCACTGGTGCTCTATGTC...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGACATAGAGCACCAGTaGATTGATGAGCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNDIEHQ*IDELEV
Trigger: AACCTCCAGCTCATCAATGCACTGGTGCTCTATGTC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAATCATTGAAGGTGTGCTaGCCTTGTTGTGGATGTGCG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYESLKVC*PCCGCA
Trigger: CGCACATCCACAACAAGGGCAGCACACCTTCAATGA...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTGCTCATTGAAGGTGTaGTGCCCTTGTTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGCSLKV*CPCCGC
Trigger: ACATCCACAACAAGGGCAGCACACCTTCAATGAGCA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTTCCGTATTGGCCTCTaGAAAAAGGTACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELFRIGL*KKVQHG
Trigger: ACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACATTACTTGCTGGGCCTaGTTCTGTCCCATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINITCWA*FCPMQH
Trigger: GTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAAT...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAAGTCCCTTCCATTACTTaGTGGGCCTGCTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAEVPSIT*WACFCP
Trigger: GGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGAC...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGACCAGTTTATGTACTTaGCTTGGACACAGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSTSLCT*LGHSLH
Trigger: GTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAACCAAGCTCTTCCATGTaGCAATTTCTCGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: LDGFRIGLCKKVQHGATEPSSSM*QFLDCH
Trigger: ATGACAATCGAGAAATTGCCACATGGAAGAGCTTGG...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGTGGAGATAAGTTCATaGCGCAAGGTATGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGVEISS*RKVCQE
Trigger: CTCTTGGCATACCTTGCGCCATGAACTTATCTCCAC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGCATGCATGATAAGTTaGCGAATTGAGGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSACMIS*RIEGDC
Trigger: ACAGTCTCCCTCAATTCGCCAACTTATCATGCATGC...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAAAGTCATACACGCCTaGATAAAAGGCTCCCCATGC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGKVIHA*IKGSPC
Trigger: GCATGGGGAGCCTTTTATCCAGGCGTGTATGACTTT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCCTCATCAACAGACATaGTTGGATGTGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSPHQQT*LDVVDD
Trigger: ATCATCCACCACATCCAACCATGTCTGTTGATGAGG...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTATGTCCAAGGGTTTGGTaGCCTAAAAACCACACTACG +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLCPRVW*PKNHTT
Trigger: CGTAGTGTGGTTTTTAGGCCACCAAACCCTTGGACA...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGGGAGGGAGTTCTTCTaGCTGCTTGACATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGGREFF*LLDIFL
Trigger: AAGAAAGATGTCAAGCAGCCAGAAGAACTCCCTCCC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAACACTGCTTCAACTGTaGATGGGCCTGAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYETLLQL*MGLKQG
Trigger: CCCTTGTTTCAGGCCCATCCACAGTTGAAGCAGTGT...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCATTTCTCTTTGTTGTaGGGAAGCAGTACGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVHFSLL*GSSTKG
Trigger: GCCCTTCGTACTGCTTCCCCACAACAAAGAGAAATG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTACATTTCTCTTTGTTGTaGGGAAGCAGTACGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLHFSLL*GSSTKG
Trigger: GCCCTTCGTACTGCTTCCCCACAACAAAGAGAAATG...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAAACAACAGGATCACAGTATCTGCGTCCTTCTTGCCTAGCATGTTTTCTCAGCCAGCCTGATTTGCTCTaGCATCCGTTCAGCTTGATA +
Preference number: 4 (lower is better)
Translates to: KTTGSQYLRPSCLACFLSQPDLL*HPFSLI
Trigger: TATCAAGCTGAACGGATGCCAGAGCAAATCAGGCTG...GCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATACTGTGATCCTGTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGGCTAAAAATCCCGTaGGCTGACTTAAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELGLKIP*ADLSHL
Trigger: CAAATGACTTAAGTCAGCCCACGGGATTTTTAGCCC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGAGGGTTTCAATGGTGTaGAACAGATCTGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSRVSMV*NRSASV
Trigger: TACTGAGGCAGATCTGTTCCACACCATTGAAACCCT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGATGCATCATAAAGTTTaGGCCTCCATGAGCACGATC +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSMHHKV*ASMSTI
Trigger: GATCGTGCTCATGGAGGCCCAAACTTTATGATGCAT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATAGGATCATGGTGGGATTaGCAGCAGGATTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIGSWWD*QQDCAA
Trigger: AGCAGCACAATCCTGCTGCCAATCCCACCATGATCC...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TTGGTGAGAATCCGGGGAGCAATGTTAATTTCACTCAACATGTCCACCTGGCTGGTAGGCCTCAAGATGTaGAATGTATTGCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LVRIRGAMLISLNMSTWLVGLKM*NVLQKA
Trigger: AGCTTTCTGCAATACATTCCACATCTTGAGGCCTAC...CAGCCAGGTGGACATGTTGAGTGAAATTAACATTGCTCCCCGGATTCTCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGGAGCCTCATGTTTCTTaGAAAGGCACTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQEPHVS*KGTQDQ
Trigger: TTGATCCTGAGTGCCTTTCCAAGAAACATGAGGCTC...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGAGCCTCATGTTTCTTaGAAAGGCACTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSEPHVS*KGTQDQ
Trigger: TTGATCCTGAGTGCCTTTCCAAGAAACATGAGGCTC...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGGATGGCTTCCGTATTaGCCTCTGCAAAAAGGTACA +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNGWLPY*PLQKGT
Trigger: TGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCTTGTGATCTGTTCTTaGATGGCTTCCGTATTGGCC +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVLVICS*MASVLA
Trigger: GGCCAATACGGAAGCCATCCAAGAACAGATCACAAG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTGTACAAATTCATaGTTCCAGAACTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESQCTNS*FQNLNA
Trigger: AGCGTTTAAGTTCTGGAACCATGAATTTGTACACTG...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCAGTGTACAAATTCATaGTTCCAGAACTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQQCTNS*FQNLNA
Trigger: AGCGTTTAAGTTCTGGAACCATGAATTTGTACACTG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCGCAGTTTCGTCTAACTaGCACCTGTCCCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFAVSSN*HLSLPL
Trigger: TAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGC...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACACAAACCAAAGGGCTaGGAAAGTCAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEHKPKG*ESQEEL
Trigger: CAGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTG...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGATCCCAACAGTAGTTaGGGCAGATACCCACAAACC +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEDPNSS*GRYPQT
Trigger: GGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGGAATGTCAGAAGACATaGAGCTATGCCCTCAGACAA +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQECQKT*SYALRQ
Trigger: TTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTC...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCATGGGTAGAGACAAAATaGAAACTCATGGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASWVETK*KLMGFQ
Trigger: TTGGAATCCCATGAGTTTCCATTTTGTCTCTACCCA...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CAA 72 bp AGTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTaGCAATTGCATTCAAAAAGAGATAGCGACCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSECGYLGTGAD*QLHSKRDSDPQ
Trigger: CTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp TCATGGTTCCAGAACTTAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAATATGTCCACCAGGTAGCTaGTTTGAGACAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SWFQNLNAGFLISSMKVICPPGS*FETRPA
Trigger: CGCTGGCCTTGTCTCAAATCAGCTACCTGGTGGACA...TATTACCTTCATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGGAACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAAGCCTACTTCTTGCATaGAATCAGCCAAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILSLLLA*NQPKSS
Trigger: AGAGCTCTTTGGCTGATTTCATGCAAGAAGTAGGCT...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAAGCCTACTTCTTGCATaGAATCAGCCAAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLSLLLA*NQPKSS
Trigger: AGAGCTCTTTGGCTGATTTCATGCAAGAAGTAGGCT...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGTCTGTTAATCCTGAATaGGTTCGAGCCATCATTCCC +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVSVNPE*VRAIIP
Trigger: GGGAATGATGGCTCGAACTCATTCAGGATTAACAGA...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTCTGTTAATCCTGAATaGGTTCGAGCCATCATTCCC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGSVNPE*VRAIIP
Trigger: GGGAATGATGGCTCGAACTCATTCAGGATTAACAGA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTCCAAGGTCTATATATaGGGTCTACTGGGAACACTT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELSKVYI*GLLGTL
Trigger: AAGTGTTCCCAGTAGACCTCATATATAGACCTTGGA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTTCCAAGGTCTATATATaGGGTCTACTGGGAACACTT +
Preference number: 4 (lower is better)
Translates to: WVPELICNCIQKEIATLSSKVYI*GLLGTL
Trigger: AAGTGTTCCCAGTAGACCTCATATATAGACCTTGGA...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTTTATAAGGGAATGTTaGATGAAGGAGAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELFIREC*MKESWP
Trigger: AGGCCAGCTCTCCTTCATTCAACATTCCCTTATAAA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TCATGGTTCCAGAACTTAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAATAGATAAGTTGGCGAATTaGGGGAGACTGTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SWFQNLNAGFLISSMKVIDKLAN*GRLSLP
Trigger: GGGCAGGGACAGTCTCCCTCAATTCGCCAACTTATC...TATTACCTTCATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGGAACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAAGCTTTTGCTGGTGACTaGGGGGTACTGAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMEAFAGD*GVLNAE
Trigger: TTCTGCATTCAGTACCCCTCAGTCACCAGCAAAAGC...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp TCATGGTTCCAGAACTTAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAATATGCTGGAATGTAGGCTaGTTCAGTCCAGAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SWFQNLNAGFLISSMKVICWNVG*FSPEVP
Trigger: GGGCACCTCTGGACTGAATCAGCCTACATTCCAGCA...TATTACCTTCATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGGAACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTGGAAATTGCATAAAGTaGCTGATAGAAGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCGNCIK*LIEAKC
Trigger: GCATTTGGCTTCTATCAGTCACTTTATGCAATTTCC...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTACCATAGTGCTAACTTaGCCAGCAAGAGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGTIVLT*PARGAF
Trigger: AAAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAAACAGTGGTAGTTGTTaGGGTGGTTACCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLNSGSC*GGYHSA
Trigger: AGCACTATGGTAACCACCTCAACAACTACCACTGTT...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTACAATTCTCTCAGTTTaGTCTGTGGCCACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGTILSV*SVATSN
Trigger: GTTGCTTGTGGCCACAGATCAAACTGAGAGAATTGT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCATTTGAATACAGGCTATaGAAGTTTGGCTCAATACTG +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASFEYRL*KFGSIL
Trigger: CAGTATTGAGCCAAACTTTCATAGCCTGTATTCAAA...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAAAGTTGTTGTGGTTGTaGTGGGAGGGAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEKLLWL*WEGVLL
Trigger: CAGAAGAACTCCCTCCCATCACAACCACAACAACTT...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTACAAGGGAATAGACATTaGTGTCGTGGTAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILQGNRH*CRGSCT
Trigger: AGTACAGCTACCACGACATCAATGTCTATTCCCTTG...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCAACTGTGGATGGGCCTaGAACAAGGGAATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSNCGWA*NKGIVG
Trigger: TCCAACAATTCCCTTGTTTCAGGCCCATCCACAGTT...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGCATCCGTTCAGCTTaGTATGTTAAAACAACAGGA +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELGIRSA*YVKTTG
Trigger: TCCTGTTGTTTTAACATATCAAGCTGAACGGATGCC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAATCTGCCTCAGTAACATaGGCAACACTCCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYESASVT*ATLLSS
Trigger: GGATGAAAGGAGTGTTGCTCATGTTACTGAGGCAGA...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAATCATACTCTGAGGCTTaGGAGATCCCAGAATGCATC +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKSYSEA*EIPECI
Trigger: GATGCATTCTGGGATCTCTCAAGCCTCAGAGTATGA...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAATCATACTCTGAGGCTTaGGAGATCCCAGAATGCATC +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYESYSEA*EIPECI
Trigger: GATGCATTCTGGGATCTCTCAAGCCTCAGAGTATGA...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGAAATCCTTTTTGAACTaGGGTGGCATTACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSKSFLN*GGITPV
Trigger: CACTGGAGTAATGCCACCTCAGTTCAAAAAGGATTT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGCAGGAAAGTGACTGGTaGTCGAGTTTTAAGATAGGA +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQQESDW*SSFKIG
Trigger: TCCTATCTTAAAACTCGATCACCAGTCACTTTCCTG...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCCAAGAGAACTCTTGTaGTCTGTTCTTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGPRELL*SVLGWL
Trigger: AAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATACTTTATATAAAGAGCTaGCCCCCATCTCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLILYIKS*PPSQAA
Trigger: AGCCGCCTGAGATGGGGGTCAGCTCTTTATATAAAG...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTATGCCGATTCACAATATaGTGTATTTCCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILCRFTI*CISCWL
Trigger: CAGCCAGCAGGAAATACAGCATATTGTGAATCGGCA...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGATTTCCACTGACGTCTaGGTCAATGTAAGAACGCAG +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVISTDV*VNVRTQ
Trigger: CTGCGTTCTTACATTGACGCAGACGTCAGTGGAAAT...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAACATTCTTCAATACTTaGACAAAAGCCATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRTFFNT*TKAIAY
Trigger: GTAGGCTATGGCTTTTGTGCAAGTATTGAAGAATGT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGACTGCACGATTATATTaGGACATTCTTCAATACTTG +
Preference number: 4 (lower is better)
Translates to: IPTVVGADTHKPKGWESQTARLY*DILQYL
Trigger: CAAGTATTGAAGAATGTCGCAATATAATCGTGCAGT...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTACTGCACGATTATATTaGGACATTCTTCAATACTTG +
Preference number: 4 (lower is better)
Translates to: LIPTVVGADTHKPKGWESTARLY*DILQYL
Trigger: CAAGTATTGAAGAATGTCGCAATATAATCGTGCAGT...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGTCCCGAACACCAAACTaGACGATTATATTGCGACAT +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQSRTPN*TIILRH
Trigger: ATGTCGCAATATAATCGTGCAGTTTGGTGTTCGGGA...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTCCCGAACACCAAACTaGACGATTATATTGCGACAT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELSRTPN*TIILRH
Trigger: ATGTCGCAATATAATCGTGCAGTTTGGTGTTCGGGA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTTACTCTGTAATGGAATaGCATCTGTTAATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAYSVME*HLLILN
Trigger: ATTCAGGATTAACAGATGGCATTCCATTACAGAGTA...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTACATTCCATGTGTGTaGCTGTGCTCCATCACTTTT +
Preference number: 4 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKYIPCV*LCSITF
Trigger: AAAAGTGATGGAGCACAGGCACACACATGGAATGTA...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTCATGGCGCAAGGTATaGCAAGAGGTGTTAATTTGT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELSWRKV*QEVLIC
Trigger: ACAAATTAACACCTCTTGGCATACCTTGCGCCATGA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTATCCCTGCCCATGCCATaGATAGTGCAAAATAATAGC +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILSLPMP*IVQNNS
Trigger: GCTATTATTTTGCACTATGCATGGCATGGGCAGGGA...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp TTGGTGAGAATCCGGGGAGCAATGTTAATTTCACTCAACATGTCCACCTGGCTGCATTCTGCCATTGCATaGATGATAAGTTGGCGAATT +
Preference number: 4 (lower is better)
Translates to: LVRIRGAMLISLNMSTWLHSAIA*MISWRI
Trigger: AATTCGCCAACTTATCATGCATGCAATGGCAGAATG...CAGCCAGGTGGACATGTTGAGTGAAATTAACATTGCTCCCCGGATTCTCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCATCTCTTTACTAAAGTaGTGGTTTGCCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFISLLK*WFASGH
Trigger: GTGGCCAGAGGCAAACCAGCACTTTAGTAAAGAGAT...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACATCTCTTTACTAAAGTaGTGGTTTGCCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNISLLK*WFASGH
Trigger: GTGGCCAGAGGCAAACCAGCACTTTAGTAAAGAGAT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGGGAGGATCTCTAGACTaGTGTCCATACTCAATATAC +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQGGSLD*CPYSIY
Trigger: GTATATTGAGTATGGACAGCAGTCTAGAGATCCTCC...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGGGAGTTCTTCTGGCTaGTTGACATCTTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQGSSSG*LTSFFG
Trigger: TCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGCCAGGAACATTGCGTaGAAACTCTTCGTAAACAGC +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEARNIA*KLFVNS
Trigger: GCTGTTTACGAAGAGTTTGCACGCAATGTTCCTGGC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGCCAAATTCTGGAAGCACGATCAATCATTaGTTCATAGTTGGATCGCAC +
Preference number: 4 (lower is better)
Translates to: HSKRDSDPQCPSPQPNSGSTINH*FIVGSH
Trigger: GTGCGATCCAACTATGAAGCAATGATTGATCGTGCT...TCCAGAATTTGGCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGCAACACATGCTCAGGTaGATTGAGTTCCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQQHMLR*IEFQEK
Trigger: CTTCTCTTGGAACTCAATGCACCTGAGCATGTGTTG...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACATGGTTTCCAACACATaGTCAGGTGCATTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNMVSNT*SGALSS
Trigger: GGAACTCAATGCACCTGAGCATGTGTTGGAAACCAT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGCACTCTTAAAGTaGCCTTGTAGAGGATTTGCA +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGAALLK*PCRGFA
Trigger: TGCAAATCCTCTACAAGGGCACTTTAAGAGTGCTGC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATATGGATACCTGTAGGTTaGTGCGCAGATCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIWIPVG*CADQTG
Trigger: TCCTGTCTGATCTGCGCAGCAACCTACAGGTATCCA...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTATTCCGTATTGGCCTCTaGAAAAAGGTACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILFRIGL*KKVQHG
Trigger: ACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAA...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTTCCGTATTGGCCTCTaGAAAAAGGTACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQFRIGL*KKVQHG
Trigger: ACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAA...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAAATTACTTGCTGGGCCTaGTTCTGTCCCATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAEITCWA*FCPMQH
Trigger: GTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAAT...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTTAAACTTTGGAACGTaGCCACATAAGACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGLNFGT*PHKTGG
Trigger: GCCTCCTGTCTTATGTGGGCACGTTCCAAAGTTTAA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAATAAGATGGTACAAATaGAGTCAGCTTTGGAATACG +
Preference number: 4 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASIRWYK*SQLWNT
Trigger: CGTATTCCAAAGCTGACTGCATTTGTACCATCTTAT...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGTATTTCCTGCTGGCTaGCTCGGTAATTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGVFPAG*LGNFSW
Trigger: CCAAGAAAAATTACCGAGCCAGCCAGCAGGAAATAC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGCAATGGATTATCAATaGCATAGGACAGCGTCGAGA +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLAMDYQ*HRTASR
Trigger: TCTCGACGCTGTCCTATGCCATTGATAATCCATTGC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAATGGATTATCAATaGCATAGGACAGCGTCGAGA +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGAMDYQ*HRTASR
Trigger: TCTCGACGCTGTCCTATGCCATTGATAATCCATTGC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCAATACCAGCATGTCTaGACAGTGTTTGATAGGGAA +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSQYQHV*TVFDRE
Trigger: TTCCCTATCAAACACTGTCCAGACATGCTGGTATTG...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCAATACCAGCATGTCTaGACAGTGTTTGATAGGGAA +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELQYQHV*TVFDRE
Trigger: TTCCCTATCAAACACTGTCCAGACATGCTGGTATTG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTGTGGAGATAAGTTCATaGCGCAAGGTATGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NQPFQENSCDLFLDGFRIVEISS*RKVCQE
Trigger: CTCTTGGCATACCTTGCGCCATGAACTTATCTCCAC...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTATAGCTGAGTTAGGATaGTTTCCAAGGAAAATTGGC +
Preference number: 4 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVIAELG*FPRKIG
Trigger: GCCAATTTTCCTTGGAAACCATCCTAACTCAGCTAT...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGGCATGCATGATAAGTTaGCGAATTGAGGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVACMIS*RIEGDC
Trigger: ACAGTCTCCCTCAATTCGCCAACTTATCATGCATGC...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGGTATTCGAGACAATTTaGCCTGATCATACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVVFETI*PDHTAP
Trigger: GGGAGCAGTATGATCAGGCCAAATTGTCTCGAATAC...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAAAGGCCTTCAAGTCCTaGGCCACATCAAGTATTCGA +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEKAFKS*ATSSIR
Trigger: TCGAATACTTGATGTGGCCCAGGACTTGAAGGCCTT...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGAAGTTGAGCACTTTTaGGCTGGTCTTTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEEVEHF*AGLFLG
Trigger: CCCCAGAAAAAGACCAGCCCAAAAGTGCTCAACTTC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCATAACTCCAGGTGGTaGTTGTCTGGCCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGHNSRW*LSGLIH
Trigger: ATGAATAAGGCCAGACAACCACCACCTGGAGTTATG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAATCTTTACTAAAGTGCTaGTTTGCCTCTGGCCACACC +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKSLLKC*FASGHT
Trigger: GGTGTGGCCAGAGGCAAACCAGCACTTTAGTAAAGA...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTCTCAGTTTGATCTGTaGCCACAAGCAACGTATCTA +
Preference number: 4 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKSQFDL*PQATYL
Trigger: TAGATACGTTGCTTGTGGCCACAGATCAAACTGAGA...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAAAACAAGGGAATTGTTaGATTCAGAGTAATGTGTGG +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRKQGNC*IQSNVW
Trigger: CCACACATTACTCTGAATCCAACAATTCCCTTGTTT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTCATTTCTCTTTGTTGTaGGGAAGCAGTACGAAGGGC +
Preference number: 4 (lower is better)
Translates to: NQPFQENSCDLFLDGFRIHFSLL*GSSTKG
Trigger: GCCCTTCGTACTGCTTCCCCACAACAAAGAGAAATG...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGGGCTAAAAATCCCGTaGGCTGACTTAAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLGLKIP*ADLSHL
Trigger: CAAATGACTTAAGTCAGCCCACGGGATTTTTAGCCC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGATGCATCATAAAGTTTaGGCCTCCATGAGCACGATC +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVMHHKV*ASMSTI
Trigger: GATCGTGCTCATGGAGGCCCAAACTTTATGATGCAT...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACGGTTGTGATAGCACTTaGCTCGGATCATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINGCDST*LGSWWD
Trigger: ATCCCACCATGATCCGAGCCAAGTGCTATCACAACC...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAGGCCTCAAGATGTaGAATGTATTGCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSVGLKM*NVLQKA
Trigger: AGCTTTCTGCAATACATTCCACATCTTGAGGCCTAC...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCTGGATACAATTAGGTaGGATCACATCACAGAACCC +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVLDTIR*DHITEP
Trigger: GGGTTCTGTGATGTGATCCCACCTAATTGTATCCAG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACAAGACCCCAAGGATGTaGCCTATTTACAATCAACCG +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNKTPRM*PIYNQP
Trigger: CGGTTGATTGTAAATAGGCCACATCCTTGGGGTCTT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCACTGTGCGACCGACTaGAATAACTTTTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELHCATD*NNFSIS
Trigger: AGAAATCGAAAAGTTATTCCAGTCGGTCGCACAGTG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
3UTR CAA 72 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTaGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QGTSLCTCLGHS*HKAKKFQTKVF
Trigger: GAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CAA 72 bp CCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTaGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLHYKVPVYVLA*DTACTKPRSSR
Trigger: TCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CAA 72 bp AGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTaGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SCLFITRYQFMY*PWTQLAQSQEV
Trigger: AACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CAA 72 bp TGCTCTCGAATTTTATCTGTGAGCCACTTATCAAGTTaGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CSRILSVSHLSS*RYSRREASAAR
Trigger: CCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGATAAAATTCGAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565605.5
3UTR CAA 72 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTaGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: NQPFQENSCDLF*DGFRIGLCKKV
Trigger: TACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAGTACTTTGCTTAATTTaGGCACTTTACTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILVLCLI*ALYSAG
Trigger: CCCAGCTGAGTAAAGTGCTCAAATTAAGCAAAGTAC...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp ACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTCTTCTTGATTTCCACTaGCGTCTGCGTCAATGTAAG +
Preference number: 4 (lower is better)
Translates to: TSAWHQLPLHYKVPVYVLLLDFH*RLRQCK
Trigger: CTTACATTGACGCAGACGTCAGTGGAAATCAAGAAG...AAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGACTTCTTGATTTCCACTaGCGTCTGCGTCAATGTAAG +
Preference number: 4 (lower is better)
Translates to: SECGYLGTGADLQLHSKRLLDFH*RLRQCK
Trigger: CTTACATTGACGCAGACGTCAGTGGAAATCAAGAAG...TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTTACTGTCACGAATTTaGAATCCAGGATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQLLSRI*NPGWSS
Trigger: ACTGGACCATCCTGGATTTCAAATTCGTGACAGTAA...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCAAGGTCTATATATaGGGTCTACTGGGAACACTT +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNSKVYI*GLLGTL
Trigger: AAGTGTTCCCAGTAGACCTCATATATAGACCTTGGA...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTTTATAAGGGAATGTTaGATGAAGGAGAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNFIREC*MKESWP
Trigger: AGGCCAGCTCTCCTTCATTCAACATTCCCTTATAAA...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp ACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCACTTATCAAGTTTaGGGTATTCACGACGTGAAG +
Preference number: 4 (lower is better)
Translates to: TSAWHQLPLHYKVPVYVLATYQV*GIHDVK
Trigger: CTTCACGTCGTGAATACCTCAAACTTGATAAGTGGC...AAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCTAGTGCCATGTAAGTaGCCAGTCCTTTCTCAATTA +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVLVPCK*PVLSQL
Trigger: TAATTGAGAAAGGACTGGTCACTTACATGGCACTAG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTACTAGTGCCATGTAAGTaGCCAGTCCTTTCTCAATTA +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLLVPCK*PVLSQL
Trigger: TAATTGAGAAAGGACTGGTCACTTACATGGCACTAG...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAACCATAGTGCTAACTTaGCCAGCAAGAGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKTIVLT*PARGAF
Trigger: AAAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGT...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAACCATAGTGCTAACTTaGCCAGCAAGAGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYETIVLT*PARGAF
Trigger: AAAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGT...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCATAACCAGATACTGTaGAACCCAAGGCATAAATTC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELHNQIL*NPRHKF
Trigger: GAATTTATGCCTTGGGTTTCACAGTATCTGGTTATG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTTTAAGTCATGCTCCTaGTGTAGCTCAGCTAATACA +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELFKSCS*CSSANT
Trigger: TGTATTAGCTGAGCTACATCAGGAGCATGACTTAAA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCCAAGGGAATAGACATTaGTGTCGTGGTAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSQGNRH*CRGSCT
Trigger: AGTACAGCTACCACGACATCAATGTCTATTCCCTTG...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGACATGGCAATCTTAATTaGTCGATCCACCACAGGATG +
Preference number: 4 (lower is better)
Translates to: SECGYLGTGADLQLHSKRHGNLN*SIHHRM
Trigger: CATCCTGTGGTGGATCGATCAATTAAGATTGCCATG...TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGTCTACTGCAGTCTTCTaGATAAAACAGCAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVSTAVF*IKQQAN
Trigger: GTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGA...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTCTACTGCAGTCTTCTaGATAAAACAGCAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGSTAVF*IKQQAN
Trigger: GTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCGGCATCCGTTCAGCTTaGTATGTTAAAACAACAGGA +
Preference number: 4 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFGIRSA*YVKTTG
Trigger: TCCTGTTGTTTTAACATATCAAGCTGAACGGATGCC...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTGCATATTAACCAAATaGTTGCGAATTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELCILTK*LRISSS
Trigger: GGAGCTGCTAATTCGCAATCATTTGGTTAATATGCA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGGCATTGCCTCTGGAATaGGCATTAATCCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: KMVQMQSALEYVWVETKWALPLE*ALILMR
Trigger: CCTCATGAGGATTAATGCTCATTCCAGAGGCAATGC...CCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCTGAGCACGGTAACTaGTTTCAACACACATTTCAG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEPEHGN*FQHTFQ
Trigger: CTGAAATGTGTGTTGAAATCAGTTACCGTGCTCAGG...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTATTTGGGTACCGGAGCTaGTTTGCAATTGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLFGYRS*FAIAFK
Trigger: TTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAA...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCAAGAGAACTCTTGTaGTCTGTTCTTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEPRELL*SVLGWL
Trigger: AAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGG...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTATCTGATGGAAATCTTTaGCACTGCTTTTACCATCGC +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILSDGNL*HCFYHR
Trigger: GCGATGGTAAAAGCAGTGGCAAAGATTTCCATCAGA...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTCCCGAACACCAAACTaGACGATTATATTGCGACAT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGSRTPN*TIILRH
Trigger: ATGTCGCAATATAATCGTGCAGTTTGGTGTTCGGGA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATACTCTGTAATGGAATaGCATCTGTTAATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRYSVME*HLLILN
Trigger: ATTCAGGATTAACAGATGGCATTCCATTACAGAGTA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTTCTCATGTACCATTCTaGCATTGCATGCATGATAAG +
Preference number: 4 (lower is better)
Translates to: WVPELICNCIQKEIATLSSHVPF*HCMHDK
Trigger: CTTATCATGCATGCAATGGCAGAATGGTACATGAGA...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTCTCATGTACCATTCTaGCATTGCATGCATGATAAG +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSSHVPF*HCMHDK
Trigger: CTTATCATGCATGCAATGGCAGAATGGTACATGAGA...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTATCTCTTTACTAAAGTaGTGGTTTGCCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: NQPFQENSCDLFLDGFRIISLLK*WFASGH
Trigger: GTGGCCAGAGGCAAACCAGCACTTTAGTAAAGAGAT...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp CATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGCCAAATTCTGGACTAATGCAAGGTTCTTaGAGAGAACCTCGATTTCAA +
Preference number: 4 (lower is better)
Translates to: HSKRDSDPQCPSPQPNSGLMQGS*REPRFQ
Trigger: TTGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAG...TCCAGAATTTGGCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGGGAGTTCTTCTGGCTaGTTGACATCTTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEGSSSG*LTSFFG
Trigger: TCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAACAGAGTAATGTGTGGTaGCAAGCCCGCAAGGGAATA +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAEQSNVW*QARKGI
Trigger: TATTCCCTTGCGGGCTTGGCACCACACATTACTCTG...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GCTCTGGCATCCGTTCAGCTTGATATGTTAAAACAACAGGATCACAGTATCTGCCATCATGTGATGAGCTaGTATTCGCATTCGAGATTC +
Preference number: 4 (lower is better)
Translates to: ALASVQLDMLKQQDHSICHHVMS*YSHSRF
Trigger: GAATCTCGAATGCGAATAGCAGCTCATCACATGATG...GCAGATACTGTGATCCTGTTGTTTTAACATATCAAGCTGAACGGATGCCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR GCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGCATCATGTGATGAGCTaGTATTCGCATTCGAGATTC +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQHHVMS*YSHSRF
Trigger: GAATCTCGAATGCGAATAGCAGCTCATCACATGATG...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAAACTTTCAGCCTGATTTaGTCTGGCATCCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMETFSLI*SGIRSA
Trigger: AGCTGAACGGATGCCAGAGCAAATCAGGCTGAAAGT...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCAGGATTTTTACTAACTaGATAGCAAATGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELRIFTN*IANATA
Trigger: GGCTGTGGCATTTGCTATGCAGTTAGTAAAAATCCT...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATAGGTGTGGAACAGATCTaGCTCAGTAACATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIGVEQI*LSNMSN
Trigger: GTTGCTCATGTTACTGAGGCAGATCTGTTCCACACC...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGATGTGCCAGCATTCTTaGAATAAATATCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSMCQHS*NKYPMG
Trigger: TCCCATCGGATATTTATTGCAAGAATGCTGGCACAT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAACTCTGGGAAATCATaGAAAAGAACCAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGNSGKS*KRTSST
Trigger: AGTGCTGCTGGTTCTTTTGCATGATTTCCCAGAGTT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACTGCTCATTGAAGGTGTaGTGCCCTTGTTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINCSLKV*CPCCGC
Trigger: ACATCCACAACAAGGGCAGCACACCTTCAATGAGCA...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GCAGCAAGGTCAATAACAAAGGCAAATGGAGTACCATTTAGCAGCATTGACAAGGTATTTCCTGCTGGCTaGCTCGGTAATTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: AARSITKANGVPFSSIDKVFPAG*LGNFSW
Trigger: CCAAGAAAAATTACCGAGCCAGCCAGCAGGAAATAC...CTTGTCAATGCTGCTAAATGGTACTCCATTTGCCTTTGTTATTGACCTTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CCA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGCTTTCAGAATATCAGTaGCAACAGTATGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQLSEYQ*QQYDRD
Trigger: ATCCCTGTCATACTGTTGCCACTGATATTCTGAAAG...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTCGATTGTCATCCTCTaGTGGTGCTTTCAGAATATC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGSIVIL*WCFQNI
Trigger: GATATTCTGAAAGCACCACCAGAGGATGACAATCGA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCCAAGCTCTTCCATGTaGCAATTTCTCGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVPSSSM*QFLDCH
Trigger: ATGACAATCGAGAAATTGCCACATGGAAGAGCTTGG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGGTGGAGATAAGTTCATaGCGCAAGGTATGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KMVQMQSALEYVWVETKWVEISS*RKVCQE
Trigger: CTCTTGGCATACCTTGCGCCATGAACTTATCTCCAC...CCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTTCCAAGGAAAATTaGCATCAGAGTGGAGATAAG +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSVSKEN*HQSGDK
Trigger: CTTATCTCCACTCTGATGCCAATTTTCCTTGGAAAC...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGTCGCCAAAGTTTCTaGAGGAAGTTGAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQCRQSF*RKLSTF
Trigger: AAAAGTGCTCAACTTCCTCCAGAAACTTTGGCGACA...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAACATAACTCCAGGTGGTaGTTGTCTGGCCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKHNSRW*LSGLIH
Trigger: ATGAATAAGGCCAGACAACCACCACCTGGAGTTATG...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTCATGGTTGGATGTGGTaGATGATTATATATTCGCTG +
Preference number: 4 (lower is better)
Translates to: WVPELICNCIQKEIATLSHGWMW*MIIYSL
Trigger: CAGCGAATATATAATCATCCACCACATCCAACCATG...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCATGGTTGGATGTGGTaGATGATTATATATTCGCTG +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSHGWMW*MIIYSL
Trigger: CAGCGAATATATAATCATCCACCACATCCAACCATG...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAACGATCTGAGAAATTaGCTGCAGCTTTATCAGAGG +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQNDLRN*LQLYQR
Trigger: CCTCTGATAAAGCTGCAGCCAATTTCTCAGATCGTT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACATTGTCCAAGGGTTTaGTGGCCTAAAAACCACACT +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEHCPRV*WPKNHT
Trigger: AGTGTGGTTTTTAGGCCACCAAACCCTTGGACAATG...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCTTGACATCTTTCTTTaGAGCAGAGAGTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGLDIFL*SRELLI
Trigger: GATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTACTTGACATCTTTCTTTaGAGCAGAGAGTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLLDIFL*SRELLI
Trigger: GATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAG...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGCTTGACATCTTTCTTTaGAGCAGAGAGTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQLDIFL*SRELLI
Trigger: GATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAG...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGCAGCCTGATTTGCTCTaGCATCCGTTCAGCTTGATA +
Preference number: 4 (lower is better)
Translates to: KMVQMQSALEYVWVETKWQPDLL*HPFSLI
Trigger: TATCAAGCTGAACGGATGCCAGAGCAAATCAGGCTG...CCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGTCAGCCCAAGCTTGCTTCATaGGCTGGGCTAAAAATCCCG +
Preference number: 4 (lower is better)
Translates to: YIIFKLAFCYSLGHQECQPKLAS*AGLKIP
Trigger: CGGGATTTTTAGCCCAGCCCATGAAGCAAGCTTGGG...CTGACATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAAACTACTTCCATCAGCTaGGGCAATCCTTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAETTSIS*GNPSGA
Trigger: TGCTCCAGAAGGATTGCCCCAGCTGATGGAAGTAGT...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCTTCAGTATTCCTTGCTaGTGCATCTGTCCAACAAAT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELFSIPC*CICPTN
Trigger: ATTTGTTGGACAGATGCACCAGCAAGGAATACTGAA...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTATCCACAGCCAAATTCTaGAAGATATCCATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLSTAKF*KISMCA
Trigger: AGCACACATGGATATCTTCCAGAATTTGGCTGTGGA...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATACTTGTGATCTGTTCTTaGATGGCTTCCGTATTGGCC +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLILVICS*MASVLA
Trigger: GGCCAATACGGAAGCCATCCAAGAACAGATCACAAG...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACCCTTCCATTACTTGCTaGGCCTGCTTCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHPSITC*ACFCPM
Trigger: CATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCAAAATGGAAACTCATaGGATTCCAATAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGQNGNS*DSNSEP
Trigger: GGGCTCACTATTGGAATCCCATGAGTTTCCATTTTG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGTTTTACCATCGCCACTaGAATCCACATGCGAAAATA +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVFYHRH*NPHAKI
Trigger: TATTTTCGCATGTGGATTTCAGTGGCGATGGTAAAA...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp GTATGGCCATTCATTCAGTGGGGTAATGGGGGAGAACAATTAATTAATGAGATTGCAAGAGGGTCAATCTaGACAGGAGAAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: VWPFIQWGNGGEQLINEIARGSI*TGEMAS
Trigger: AGATGCCATTTCTCCTGTTCAGATTGACCCTCTTGC...AATCTCATTAATTAATTGTTCTCCCCCATTACCCCACTGAATGAATGGCCATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCTTTAAGTCATGCTCCTaGTGTAGCTCAGCTAATACA +
Preference number: 4 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFFKSCS*CSSANT
Trigger: TGTATTAGCTGAGCTACATCAGGAGCATGACTTAAA...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGTTTAAGTCATGCTCCTaGTGTAGCTCAGCTAATACA +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVFKSCS*CSSANT
Trigger: TGTATTAGCTGAGCTACATCAGGAGCATGACTTAAA...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTACAGGTTTTAGCTCATTaGTGTCTAATGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLQVLAH*CLMQGS
Trigger: AGAACCTTGCATTAGACATCAATGAGCTAAAACCTG...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGAAAGAACCTTGTTATaGGATCATCGGTCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLERTLL*DHRSSV
Trigger: TACTGAAGACCGATGATCTCATAACAAGGTTCTTTC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGGAAAGAACCTTGTTATaGGATCATCGGTCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVERTLL*DHRSSV
Trigger: TACTGAAGACCGATGATCTCATAACAAGGTTCTTTC...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CACTTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGGTCAATATCTGATGGAAATCTTTaGCACTGCTTTTACCATCGC +
Preference number: 4 (lower is better)
Translates to: HLSSLRYSRREASAARSISDGNL*HCFYHR
Trigger: GCGATGGTAAAAGCAGTGGCAAAGATTTCCATCAGA...TATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR GCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTACATTCTGCCATTGCATaGATGATAAGTTGGCGAATT +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLHSAIA*MISWRI
Trigger: AATTCGCCAACTTATCATGCATGCAATGGCAGAATG...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATAGTACCATTCTGCCATTaGATGCATGATAAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIVPFCH*MHDKLA
Trigger: CGCCAACTTATCATGCATGCAATGGCAGAATGGTAC...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAATGGATCCAAAAGGCTTaGGTAAGGCTTCAAGAACAT +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKWIQKA*VRLQEH
Trigger: ATGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCA...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGGAGGATCTCTAGACTaGTGTCCATACTCAATATAC +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEGGSLD*CPYSIY
Trigger: GTATATTGAGTATGGACAGCAGTCTAGAGATCCTCC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAATCCTTCCTGACTATTTaGTCACAAGTAGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYESFLTI*SQVVMA
Trigger: TGCCATGACTACTTGTGAGCAAATAGTCAGGAAGGA...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAACATCATGTGATGAGCTaGTATTCGCATTCGAGATTC +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKHHVMS*YSHSRF
Trigger: GAATCTCGAATGCGAATAGCAGCTCATCACATGATG...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp TTTTTCTACTGCAGTCTTCTGAATAAAACAGCAAGCCAACTCACAATTGTCCTGGTCCATCTCAGGGCCTaGTTTTTCTACTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: FFYCSLLNKTASQLTIVLVHLRA*FFYCSL
Trigger: AAGACTGCAGTAGAAAAAGCAGGCCCTGAGATGGAC...CAGGACAATTGTGAGTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAGGATTTTTACTAACTaGATAGCAAATGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGRIFTN*IANATA
Trigger: GGCTGTGGCATTTGCTATGCAGTTAGTAAAAATCCT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCATCTGTCCAACAAATaGAGAGAAAGCTTTGGTACT +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNHLSNK*RESFGT
Trigger: AGTACCAAAGCTTTCTCTGCATTTGTTGGACAGATG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCATCTGTCCAACAAATaGAGAGAAAGCTTTGGTACT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGHLSNK*RESFGT
Trigger: AGTACCAAAGCTTTCTCTGCATTTGTTGGACAGATG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAATGTGCCAGCATTCTTaGAATAAATATCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLMCQHS*NKYPMG
Trigger: TCCCATCGGATATTTATTGCAAGAATGCTGGCACAT...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAAACTCTGGGAAATCATaGAAAAGAACCAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYENSGKS*KRTSST
Trigger: AGTGCTGCTGGTTCTTTTGCATGATTTCCCAGAGTT...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GTATGGCCATTCATTCAGTGGGGTAATGGGGGAGAACAATTAATTAATGAGATTATACCTGTAGGTTGCTaGGCAGATCAGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VWPFIQWGNGGEQLINEIIPVGC*ADQTGK
Trigger: CTTTCCTGTCTGATCTGCGCAGCAACCTACAGGTAT...AATCTCATTAATTAATTGTTCTCCCCCATTACCCCACTGAATGAATGGCCATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGTACCGGAGCTGATTTaGAATTGCATTCAAAAAGAG +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNVPELI*NCIQKE
Trigger: CTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTAC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACGTATTTCCTGCTGGCTaGCTCGGTAATTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINVFPAG*LGNFSW
Trigger: CCAAGAAAAATTACCGAGCCAGCCAGCAGGAAATAC...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCTTCTGATAGTGCAATaGATTATCAATGGCATAGGA +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELLLIVQ*IINGIG
Trigger: TCCTATGCCATTGATAATCCATTGCACTATCAGAAG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTATTCTGTTTGATAAACTaGGCAGCGAAACCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILFCLIN*AAKPLR
Trigger: TCTTAGAGGTTTCGCTGCCCAGTTTATCAAACAGAA...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAATATATGAGGTCTACTaGGAACACTTCCATACCCAA +
Preference number: 4 (lower is better)
Translates to: SWDSNSEPFPCSWTYPILIYEVY*EHFHTQ
Trigger: TTGGGTATGGAAGTGTTCCCAGTAGACCTCATATAT...TAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGATATATGAGGTCTACTaGGAACACTTCCATACCCAA +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQIYEVY*EHFHTQ
Trigger: TTGGGTATGGAAGTGTTCCCAGTAGACCTCATATAT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGATTGTCATCCTCTGGTaGTGCTTTCAGAATATCAGT +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVIVILW*CFQNIS
Trigger: ACTGATATTCTGAAAGCACCACCAGAGGATGACAAT...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCAAGCTCTTCCATGTaGCAATTTCTCGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEPSSSM*QFLDCH
Trigger: ATGACAATCGAGAAATTGCCACATGGAAGAGCTTGG...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGATAGCTGAGTTAGGATaGTTTCCAAGGAAAATTGGC +
Preference number: 4 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQIAELG*FPRKIG
Trigger: GCCAATTTTCCTTGGAAACCATCCTAACTCAGCTAT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACGTATTCGAGACAATTTaGCCTGATCATACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINVFETI*PDHTAP
Trigger: GGGAGCAGTATGATCAGGCCAAATTGTCTCGAATAC...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp ATTTTATCTGTGAGCCACTTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTAAAGTCATACACGCCTaGATAAAAGGCTCCCCATGC +
Preference number: 4 (lower is better)
Translates to: ILSVSHLSSLRYSRREASKVIHA*IKGSPC
Trigger: GCATGGGGAGCCTTTTATCCAGGCGTGTATGACTTT...ACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CCA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGATCAACAGACATGGTTaGATGTGGTGGATGATTATA +
Preference number: 4 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKINRHG*MWWMII
Trigger: TATAATCATCCACCACATCCAACCATGTCTGTTGAT...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACCATTGTCCAAGGGTTTaGTGGCCTAAAAACCACACT +
Preference number: 4 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINHCPRV*WPKNHT
Trigger: AGTGTGGTTTTTAGGCCACCAAACCCTTGGACAATG...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAAAACAGCCAACTGCTTTaGGTCCACACCACCAACTTT +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAENSQLL*VHTTNF
Trigger: AAAGTTGGTGGTGTGGACCCAAAGCAGTTGGCTGTT...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTATCATTGCTTCATAGTTaGATCGCACTACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLSLLHS*IALLPS
Trigger: TGATGGAAGTAGTGCGATCCAACTATGAAGCAATGA...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGCAATAAATATCCGATaGGAAATCAGTTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNAINIR*EISSSQ
Trigger: CTGGCTTGAACTGATTTCCCATCGGATATTTATTGC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCTTTTTGAACTGAGGTaGCATTACTCCAGTGAAATT +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSLFELR*HYSSEI
Trigger: AATTTCACTGGAGTAATGCCACCTCAGTTCAAAAAG...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTTCCACAGCCAAATTCTaGAAGATATCCATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TSAWHQLPLHYKVPVYVLSTAKF*KISMCA
Trigger: AGCACACATGGATATCTTCCAGAATTTGGCTGTGGA...AAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCCAGAACTTAAACGCTaGGTTTTTAATCAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: GWESQEELKGFFSQFMNSPELKR*VFNQLN
Trigger: ATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGG...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GCAAGGTCAATAACAAAGGCAAATGGAGTACCATTTAGCAGCATTGACAAGGCCGTATTCGAGACAATTTaGCTTTGTAATCAGCAACGC +
Preference number: 4 (lower is better)
Translates to: ARSITKANGVPFSSIDKAVFETI*LCNQQR
Trigger: GCGTTGCTGATTACAAAGCCAAATTGTCTCGAATAC...GGCCTTGTCAATGCTGCTAAATGGTACTCCATTTGCCTTTGTTATTGACCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR TCA 90 bp ATTTTATCTGTGAGCCACTTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCCACTTATCAAGTTTaGGGTATTCACGACGTGAAG +
Preference number: 4 (lower is better)
Translates to: ILSVSHLSSLRYSRREASATYQV*GIHDVK
Trigger: CTTCACGTCGTGAATACCTCAAACTTGATAAGTGGC...ACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR TCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGTTTGAATACAGGCTATaGAAGTTTGGCTCAATACTG +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVFEYRL*KFGSIL
Trigger: CAGTATTGAGCCAAACTTTCATAGCCTGTATTCAAA...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAACATTCTTCAATACTTaGACAAAAGCCATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLTFFNT*TKAIAY
Trigger: GTAGGCTATGGCTTTTGTGCAAGTATTGAAGAATGT...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGCCAAATTCTGGATACTCTGTAATGGAATaGCATCTGTTAATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HSKRDSDPQCPSPQPNSGYSVME*HLLILN
Trigger: ATTCAGGATTAACAGATGGCATTCCATTACAGAGTA...TCCAGAATTTGGCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTCTGGAAATAGCTGTTTaGTTCATCATCTATCTCTTT +
Preference number: 4 (lower is better)
Translates to: WVPELICNCIQKEIATLSLEIAV*FIIYLF
Trigger: AAAGAGATAGATGATGAAGCAAACAGCTATTTCCAG...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCTGGAAATAGCTGTTTaGTTCATCATCTATCTCTTT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELLEIAV*FIIYLF
Trigger: AAAGAGATAGATGATGAAGCAAACAGCTATTTCCAG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATACATCATGTGATGAGCTaGTATTCGCATTCGAGATTC +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIHHVMS*YSHSRF
Trigger: GAATCTCGAATGCGAATAGCAGCTCATCACATGATG...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AAAAGTGTGTGCACATGCAACATCACTTTAAGTCATTTTGTATCGGCCTTCTCATATCTGCGTCCTTCTTaGCTAGCATGTTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KSVCTCNITLSHFVSAFSYLRPS*LACFLS
Trigger: GCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATA...TGAGAAGGCCGATACAAAATGACTTAAAGTGATGTTGCATGTGCACACACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR GCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAATGGCATGTAGATGTTaGTCCAGTTCTGTAATACAC +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKMACRC*SSSVIH
Trigger: GTGTATTACAGAACTGGAGCAACATCTACATGCCAT...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAAGCAGCACTCTTAAAGTaGCCTTGTAGAGGATTTGCA +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAEAALLK*PCRGFA
Trigger: TGCAAATCCTCTACAAGGGCACTTTAAGAGTGCTGC...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGTACCGGAGCTGATTTaGAATTGCATTCAAAAAGAG +
Preference number: 4 (lower is better)
Translates to: SECGYLGTGADLQLHSKRVPELI*NCIQKE
Trigger: CTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTAC...TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGTACCGGAGCTGATTTaGAATTGCATTCAAAAAGAG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEVPELI*NCIQKE
Trigger: CTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTAC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAACGTCGAGATAAAATTTaGCTTTGTAATCAGCAACGC +
Preference number: 4 (lower is better)
Translates to: VVSVAIWVPELICNCIQKRRDKI*LCNQQR
Trigger: GCGTTGCTGATTACAAAGCCAAATTTTATCTCGACG...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCTTCTGTTTGATAAACTaGGCAGCGAAACCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSFCLIN*AAKPLR
Trigger: TCTTAGAGGTTTCGCTGCCCAGTTTATCAAACAGAA...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAATTGTCATCCTCTGGTaGTGCTTTCAGAATATCAGT +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEIVILW*CFQNIS
Trigger: ACTGATATTCTGAAAGCACCACCAGAGGATGACAAT...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACAAGGCCTTCAAGTCCTaGGCCACATCAAGTATTCGA +
Preference number: 4 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHKAFKS*ATSSIR
Trigger: TCGAATACTTGATGTGGCCCAGGACTTGAAGGCCTT...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTGGCATAACTCCAGGTaGTGGTTGTCTGGCCTTATT +
Preference number: 4 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHWHNSR*WLSGLI
Trigger: AATAAGGCCAGACAACCACCACCTGGAGTTATGCCA...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATATGCAGAACCCAAATTTaGAGGAAAACCCTGCATACT +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLICRTQI*RKTLHT
Trigger: AGTATGCAGGGTTTTCCTCCAAATTTGGGTTCTGCA...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACATGGTTGGATGTGGTaGATGATTATATATTCGCTG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYEHGWMW*MIIYSL
Trigger: CAGCGAATATATAATCATCCACCACATCCAACCATG...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACATCAACAGACATGGTTaGATGTGGTGGATGATTATA +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNINRHG*MWWMII
Trigger: TATAATCATCCACCACATCCAACCATGTCTGTTGAT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAACCTCATCAACAGACATaGTTGGATGTGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAEPHQQT*LDVVDD
Trigger: ATCATCCACCACATCCAACCATGTCTGTTGATGAGG...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGATCCAAGAGCAGCTATaGCATCCCGAGAGTTTCGAG +
Preference number: 4 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMIQEQL*HPESFE
Trigger: CTCGAAACTCTCGGGATGCCATAGCTGCTCTTGGAT...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGGGTTGTGATAGCACTTaGCTCGGATCATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMGCDST*LGSWWD
Trigger: ATCCCACCATGATCCGAGCCAAGTGCTATCACAACC...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGCAATAAATATCCGATaGGAAATCAGTTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSAINIR*EISSSQ
Trigger: CTGGCTTGAACTGATTTCCCATCGGATATTTATTGC...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGGTGAGTGTGGCTATTTaGGTACCGGAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMVSVAI*VPELIC
Trigger: GCAAATCAGCTCCGGTACCCAAATAGCCACACTCAC...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCCAGAACTTAAACGCTaGGTTTTTAATCAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: KSGRAERILQSVYELGAVPELKR*VFNQLN
Trigger: ATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCAGTGTACAAATTCATaGTTCCAGAACTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGQCTNS*FQNLNA
Trigger: AGCGTTTAAGTTCTGGAACCATGAATTTGTACACTG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGCACAAACCAAAGGGCTaGGAAAGTCAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMHKPKG*ESQEEL
Trigger: CAGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTG...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCCAAAAGAAATAAGATaGTACAAATGCAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLGKSGRAERILQSVYELPKEIR*YKCSQL
Trigger: AAGCTGACTGCATTTGTACCATCTTATTTCTTTTGG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATAGTTGGATGTGGTGGATaGTTATATATTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIVGCGG*LYIRWK
Trigger: TTTCCAGCGAATATATAATCATCCACCACATCCAAC...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGCGTGTCAAGGAAGTTTaGATACAGGCTATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: KMVQMQSALEYVWVETKWRVKEV*IQAMKV
Trigger: AACTTTCATAGCCTGTATTCAAACTTCCTTGACACG...CCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATATGCATATTAACCAAATaGTTGCGAATTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLICILTK*LRISSS
Trigger: GGAGCTGCTAATTCGCAATCATTTGGTTAATATGCA...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp TACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGTCAGATTGACTGCGCTAGGTaGAGATCATACTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: YIIFKLAFCYSLGHQECQIDCAR*RSYCCI
Trigger: TATGCAGCAGTATGATCTTCACCTAGCGCAGTCAAT...CTGACATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp ATTTTATCTGTGAGCCACTTATCAAGTTTGAGGTATTCACGACGTGAAGCAAGTCCACTGAAATCCACATaGGAAAATAGGCAGCGTAAT +
Preference number: 4 (lower is better)
Translates to: ILSVSHLSSLRYSRREASPLKST*ENRQRN
Trigger: ATTACGCTGCCTATTTTCGCATGTGGATTTCAGTGG...ACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR GCA 90 bp TCATGGTTCCAGAACTTAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAATATCCCTGCCCATGCCATaGATAGTGCAAAATAATAGC +
Preference number: 4 (lower is better)
Translates to: SWFQNLNAGFLISSMKVISLPMP*IVQNNS
Trigger: GCTATTATTTTGCACTATGCATGGCATGGGCAGGGA...TATTACCTTCATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGGAACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCTGGAAATAGCTGTTTaGTTCATCATCTATCTCTTT +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNLEIAV*FIIYLF
Trigger: AAAGAGATAGATGATGAAGCAAACAGCTATTTCCAG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGAGTCTTTAAATCTCTaGAGCATTTCTAATACCTCA +
Preference number: 4 (lower is better)
Translates to: KGWESQEELKGFFSQFMNESLNL*SISNTS
Trigger: TGAGGTATTAGAAATGCTGCAGAGATTTAAAGACTC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGAGTCTTTAAATCTCTaGAGCATTTCTAATACCTCA +
Preference number: 4 (lower is better)
Translates to: RAERILQSVYELGAVRPLESLNL*SISNTS
Trigger: TGAGGTATTAGAAATGCTGCAGAGATTTAAAGACTC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR GCA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTTGGTTAGCTACAGTATaGATACACATACAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LGKSGRAERILQSVYELGWLATV*IHIQEV
Trigger: TACTTCTTGTATGTGTATGCATACTGTAGCTAACCA...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AAAACAACAGGATCACAGTATCTGCGTCCTTCTTGCCTAGCATGTTTTCTCAGCAAAAGTGTGTGCACATaGAACATCACTTTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KTTGSQYLRPSCLACFLSKSVCT*NITLSH
Trigger: ATGACTTAAAGTGATGTTGCATGTGCACACACTTTT...GCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATACTGTGATCCTGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTTCTGATAGTGCAATaGATTATCAATGGCATAGGA +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYELLIVQ*IINGIG
Trigger: TCCTATGCCATTGATAATCCATTGCACTATCAGAAG...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCAGACATGGTTGGATGTaGTGGATGATTATATATTCG +
Preference number: 4 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSRHGWM*WMIIYS
Trigger: CGAATATATAATCATCCACCACATCCAACCATGTCT...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAAGACATGGTTGGATGTaGTGGATGATTATATATTCG +
Preference number: 4 (lower is better)
Translates to: KGLGKSGRAERILQSVYERHGWM*WMIIYS
Trigger: CGAATATATAATCATCCACCACATCCAACCATGTCT...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATATTCAGTATTCCTTGCTaGTGCATCTGTCCAACAAAT +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIFSIPC*CICPTN
Trigger: ATTTGTTGGACAGATGCACCAGCAAGGAATACTGAA...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGGCAATAAATATCCGATaGGAAATCAGTTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: KMVQMQSALEYVWVETKWAINIR*EISSSQ
Trigger: CTGGCTTGAACTGATTTCCCATCGGATATTTATTGC...CCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp TTCTACTGCAGTCTTCTGAATAAAACAGCAAGCCAACTCACAATTGTCCTGAGCCATTTCTCTTTGTTGTaGGGAAGCAGTCTGAATTAT +
Preference number: 4 (lower is better)
Translates to: FYCSLLNKTASQLTIVLSHFSLL*GSSLNY
Trigger: ATAATTCAGACTGCTTCCCCACAACAAAGAGAAATG...GCTCAGGACAATTGTGAGTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR TCA 90 bp TCATGGTTCCAGAACTTAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAATACTAGTGCCATGTAAGTaGCCAGTCCTTTCTCAATTA +
Preference number: 4 (lower is better)
Translates to: SWFQNLNAGFLISSMKVILVPCK*PVLSQL
Trigger: TAATTGAGAAAGGACTGGTCACTTACATGGCACTAG...TATTACCTTCATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGGAACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR TCA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAAGGAAATTGCATAAAGTaGCTGATAGAAGCCAAATGC +
Preference number: 4 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAEGNCIK*LIEAKC
Trigger: GCATTTGGCTTCTATCAGTCACTTTATGCAATTTCC...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGAACAGTGGTAGTTGTTaGGGTGGTTACCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMNSGSC*GGYHSA
Trigger: AGCACTATGGTAACCACCTCAACAACTACCACTGTT...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp TATTTGAAAAGTGTGTGCACATGCAACATCACTTTAAGTCATTTTGTATCGGCCTCTACTGCAGTCTTCTaGATAAAACAGCAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: YLKSVCTCNITLSHFVSASTAVF*IKQQAN
Trigger: GTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGA...GGCCGATACAAAATGACTTAAAGTGATGTTGCATGTGCACACACTTTTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR TCA 90 bp TATTTGAAAAGTGTGTGCACATGCAACATCACTTTAAGTCATTTTGTATCGGCCGGCATCCGTTCAGCTTaGTATGTTAAAACAACAGGA +
Preference number: 4 (lower is better)
Translates to: YLKSVCTCNITLSHFVSAGIRSA*YVKTTG
Trigger: TCCTGTTGTTTTAACATATCAAGCTGAACGGATGCC...GGCCGATACAAAATGACTTAAAGTGATGTTGCATGTGCACACACTTTTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR GCA 90 bp TCATGGTTCCAGAACTTAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAATATCTGATGGAAATCTTTaGCACTGCTTTTACCATCGC +
Preference number: 4 (lower is better)
Translates to: SWFQNLNAGFLISSMKVISDGNL*HCFYHR
Trigger: GCGATGGTAAAAGCAGTGGCAAAGATTTCCATCAGA...TATTACCTTCATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGGAACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR GCA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATAACATTCTTCAATACTTaGACAAAAGCCATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: ALPMFLDISNSSTSTFLITFFNT*TKAIAY
Trigger: GTAGGCTATGGCTTTTGTGCAAGTATTGAAGAATGT...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTGGATCCAAAAGGCTTaGGTAAGGCTTCAAGAACAT +
Preference number: 4 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHWIQKA*VRLQEH
Trigger: ATGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCA...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp TATTTGAAAAGTGTGTGCACATGCAACATCACTTTAAGTCATTTTGTATCGGCCTCCTTCCTGACTATTTaGTCACAAGTAGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: YLKSVCTCNITLSHFVSASFLTI*SQVVMA
Trigger: TGCCATGACTACTTGTGAGCAAATAGTCAGGAAGGA...GGCCGATACAAAATGACTTAAAGTGATGTTGCATGTGCACACACTTTTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR CCA 90 bp GTATGGCCATTCATTCAGTGGGGTAATGGGGGAGAACAATTAATTAATGAGATTCGTCGAGATAAAATTTaGCTTTGTAATCAGCAACGC +
Preference number: 4 (lower is better)
Translates to: VWPFIQWGNGGEQLINEIRRDKI*LCNQQR
Trigger: GCGTTGCTGATTACAAAGCCAAATTTTATCTCGACG...AATCTCATTAATTAATTGTTCTCCCCCATTACCCCACTGAATGAATGGCCATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACCTTCTGATAGTGCAATaGATTATCAATGGCATAGGA +
Preference number: 4 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINLLIVQ*IINGIG
Trigger: TCCTATGCCATTGATAATCCATTGCACTATCAGAAG...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CCA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACCACTGTGCGACCGACTaGAATAACTTTTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHHCATD*NNFSIS
Trigger: AGAAATCGAAAAGTTATTCCAGTCGGTCGCACAGTG...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATTTATGTACTTGCCTTaGACACAGCTTGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: NKMVQMQSALEYVWVETKFMYLP*TQLAQS
Trigger: GCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAA...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CAA 72 bp ATCCTTATAAAAGGGGCTGTATTGGTCCTTTCAACTTaGTCATTATTCAGCTTAGCCTGTATGGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: ILIKGAVLVLST*SLFSLACMAIH
Trigger: ATGAATGGCCATACAGGCTAAGCTGAATAATGACAAAGTTGAAAGGACCAATACAGCCCCTTTTATAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp TACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGTCAGCAGGTTTTAGCTCATTaGTGTCTAATGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: YIIFKLAFCYSLGHQECQQVLAH*CLMQGS
Trigger: AGAACCTTGCATTAGACATCAATGAGCTAAAACCTG...CTGACATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGAAAAATCCCGTGGGCTaGCTTAAGTCATTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMKNPVG*LKSFVG
Trigger: ACCTACAAATGACTTAAGTCAGCCCACGGGATTTTT...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR TCA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGAAATCCTTTTTGAACTaGGGTGGCATTACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMKSFLN*GGITPV
Trigger: CACTGGAGTAATGCCACCTCAGTTCAAAAAGGATTT...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAAACTGCACGATTATATTaGGACATTCTTCAATACTTG +
Preference number: 4 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMETARLY*DILQYL
Trigger: CAAGTATTGAAGAATGTCGCAATATAATCGTGCAGT...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR GCA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAAGAGTCTTTAAATCTCTaGAGCATTTCTAATACCTCA +
Preference number: 4 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMEESLNL*SISNTS
Trigger: TGAGGTATTAGAAATGCTGCAGAGATTTAAAGACTC...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACGTTTCCAAGGAAAATTaGCATCAGAGTGGAGATAAG +
Preference number: 4 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHVSKEN*HQSGDK
Trigger: CTTATCTCCACTCTGATGCCAATTTTCCTTGGAAAC...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACATAGCTGAGTTAGGATaGTTTCCAAGGAAAATTGGC +
Preference number: 4 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHIAELG*FPRKIG
Trigger: GCCAATTTTCCTTGGAAACCATCCTAACTCAGCTAT...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
3UTR CAA 72 bp AGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTaGGGACACCAGGAATGTCAGAAGACATGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: SYIIFKLAFCYS*GHQECQKTWSY
Trigger: ATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAAAGACATGGTTGGATGTaGTGGATGATTATATATTCG +
Preference number: 4 (lower is better)
Translates to: NKMVQMQSALEYVWVETKRHGWM*WMIIYS
Trigger: CGAATATATAATCATCCACCACATCCAACCATGTCT...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAAAAACAAGGGAATTGTTaGATTCAGAGTAATGTGTGG +
Preference number: 4 (lower is better)
Translates to: NKMVQMQSALEYVWVETKKQGNC*IQSNVW
Trigger: CCACACATTACTCTGAATCCAACAATTCCCTTGTTT...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CCA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAACTTTTTGAACTGAGGTaGCATTACTCCAGTGAAATT +
Preference number: 4 (lower is better)
Translates to: NKMVQMQSALEYVWVETKLFELR*HYSSEI
Trigger: AATTTCACTGGAGTAATGCCACCTCAGTTCAAAAAG...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS CCA 90 bp GCTGATTTGAGACAAGGCCAGCGAGAGCGAGTCAAGATTCATTGCTaGTTGGGGCGGAAGCAGGCGGCCGAGCCCGGCGCAAAATCACCA +
Preference number: 5 (lower is better)
Translates to: ADLRQGQRERVKIHC*LGRKQAAEPGAKSP
Trigger: TGGTGATTTTGCGCCGGGCTCGGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000564557.1
ENST00000565605.5
ENST00000565697.1
ENST00000567188.5
ENST00000569020.5
ENST00000569240.5
ENST00000569916.1
CDS GCA 90 bp GTAGCTGATTTGAGACAAGGCCAGCGAGAGCGAGTCAAGATTCATTaGTGGTTGGGGCGGAAGCAGGCGGCCGAGCCCGGCGCAAAATCA +
Preference number: 5 (lower is better)
Translates to: VADLRQGQRERVKIH*WLGRKQAAEPGAKS
Trigger: TGATTTTGCGCCGGGCTCGGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAATCAGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000564557.1
ENST00000565605.5
ENST00000565697.1
ENST00000567188.5
ENST00000569020.5
ENST00000569240.5
ENST00000569916.1
CDS-3UTR CAA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACGGGGTGGAAATGCTTTaGCTGGTGACTGAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: PSITCWACFCPMQHCATDGVEML*LVTEGY
Trigger: GTACCCCTCAGTCACCAGCAAAAGCATTTCCACCCC...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCACGGGACAGCGTTCTaGGGGAAAATCTCTGCGCAG +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGHGTAF*GKISAQ
Trigger: CTGCGCAGAGATTTTCCCCAAGAACGCTGTCCCGTG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTCGAAGAGCCTGAGCTaGAGGGTTCATGGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: PSITCWACFCPMQHCATDSKSLS*RVHGQS
Trigger: ACTTTGGCCATGAACCCTCAAGCTCAGGCTCTTCGA...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGCGGATCATGGTGGGATaGGCAGCAGGATTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLRIMVG*AAGLCC
Trigger: GCAGCACAATCCTGCTGCCAATCCCACCATGATCCG...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACACAAAGCCAGGAGCTTaGGTAGGCCTCAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: PSITCWACFCPMQHCATDTKPGA*VGLKMW
Trigger: CCACATCTTGAGGCCTACCAAAGCTCCTGGCTTTGT...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS CCA 90 bp GAACAAAGGCATCCAGGTTGTGATAGCACTTGGCTCGGATCATGGTaGGATTGGCAGCAGGATTGTGCTGCTGCTCAGCCTGAGCACGGT +
Preference number: 5 (lower is better)
Translates to: EQRHPGCDSTWLGSW*DWQQDCAAAQPEHG
Trigger: ACCGTGCTCAGGCTGAGCAGCAGCACAATCCTGCTGCCAATCCCACCATGATCCGAGCCAAGTGCTATCACAACCTGGATGCCTTTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 90 bp GTCGAACAAAGGCATCCAGGTTGTGATAGCACTTGGCTCGGATCATaGTGGGATTGGCAGCAGGATTGTGCTGCTGCTCAGCCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: VEQRHPGCDSTWLGS*WDWQQDCAAAQPEH
Trigger: GTGCTCAGGCTGAGCAGCAGCACAATCCTGCTGCCAATCCCACCATGATCCGAGCCAAGTGCTATCACAACCTGGATGCCTTTGTTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCACCAGGTAGCTGATTaGAGACAAGGCCAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGHQVAD*RQGQRE
Trigger: CTCTCGCTGGCCTTGTCTCAAATCAGCTACCTGGTG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGCCCTCTACAGCCTTTaGGAGCAATCCAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGALYSL*EQSKSS
Trigger: GCTGCTCTTGGATTGCTCCAAAAGGCTGTAGAGGGC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGAAGGTGTGCTGCCCTaGTTGTGGATGTGCGCAATG +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLEGVLP*LWMCAM
Trigger: CATTGCGCACATCCACAACAAGGGCAGCACACCTTC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp TCACTGCAGGGAGTCCAAGAGCACCAGTTCCTATACCAGTCAGGCTaGCTGTGCCAAGACCACCTACTGGAAGCTGTGATGAAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: SLQGVQEHQFLYQSG*LCQDHLLEAVMKVL
Trigger: GAGGACTTTCATCACAGCTTCCAGTAGGTGGTCTTGGCACAGGCAGCCTGACTGGTATAGGAACTGGTGCTCTTGGACTCCCTGCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS CCA 90 bp CAAGCCCGCAAGGGAATAGACATTGATGTCGTGGTAGCTGTACTGTaGCTGTGGTGGAACCGTGGCTGTACAAGTGGTGTTGGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: QARKGIDIDVVVAVL*LWWNRGCTSGVGSW
Trigger: CCAGCTACCAACACCACTTGTACAGCCACGGTTCCACCACAGCCACAGTACAGCTACCACGACATCAATGTCTATTCCCTTGCGGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAAAGATTCATTGCTGGTaGGGGCGGAAGCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: TRNVRRHGAMPSDKCMASKIHCW*GRKQAA
Trigger: GGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTT...TGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCACGGGACAGCGTTCTaGGGGAAAATCTCTGCGCAG +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQHGTAF*GKISAQ
Trigger: CTGCGCAGAGATTTTCCCCAAGAACGCTGTCCCGTG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGACTCCCTGCACAAGCTaGCAGACAGGCCAACATTGT +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLTPCTS*QTGQHC
Trigger: ACAATGTTGGCCTGTCTGCAAGCTTGTGCAGGGAGT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCGGACAGCCCGTTCAATaGCCTGACGCACACACTGCT +
Preference number: 5 (lower is better)
Translates to: NVRRHGAMPSDKCMASAAGQPVQ*PDAHTA
Trigger: AGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTCC...GGCAGCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGCAGCATCAGCACCACTaGTGGCATCTAGTAAGCCCT +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLQHQHH*WHLVSP
Trigger: AGGGCTTACTAGATGCCACAAGTGGTGCTGATGCTG...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCAGCATCAGCACCACTaGTGGCATCTAGTAAGCCCT +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGQHQHH*WHLVSP
Trigger: AGGGCTTACTAGATGCCACAAGTGGTGCTGATGCTG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGAATGCAGAGAAAGCTTaGGTACTGTCGCGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLNAEKA*VLSRPA
Trigger: AGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCATT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCGGATCATGGTGGGATaGGCAGCAGGATTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRARIMVG*AAGLCC
Trigger: GCAGCACAATCCTGCTGCCAATCCCACCATGATCCG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCATCTTTGTGACAGTGTaGGTGGCCTCCCCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGIFVTV*VASPEC
Trigger: ACACTCAGGGGAGGCCACCAACACTGTCACAAAGAT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp TCCAGAGGTGCCCAGTTTCCTCTGTACAAAAGGGTCGTTATTCACTaGAGGGAGTCCAAGAGCACCAGTTCCTATACCAGTCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SRGAQFPLYKRVVIH*RESKSTSSYTSQAA
Trigger: GGCAGCCTGACTGGTATAGGAACTGGTGCTCTTGGACTCCCTGCAGTGAATAACGACCCTTTTGTACAGAGGAAACTGGGCACCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
ENST00000569882.1
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGAAGAGCTGTTTGACTaGCTCATACTGCCCAACCTC +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLEELFD*LILPNL
Trigger: GAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTTC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGAGCTACATCATCTGTaGCCCAAGCTTGCTTCATGG +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLELHHL*PKLASW
Trigger: CCATGAAGCAAGCTTGGGCAACAGATGATGTAGCTC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CCCGACATAGAGCACCAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGGGTCTTCAGTATTCCTaGCTGGTGCATCTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: PDIEHQCIDELEVVAIPRGLQYS*LVHLSN
Trigger: GTTGGACAGATGCACCAGCAAGGAATACTGAAGACC...CCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTCTATGTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGGTGTGCTGCCCTaGTTGTGGATGTGCGCAATG +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQEGVLP*LWMCAM
Trigger: CATTGCGCACATCCACAACAAGGGCAGCACACCTTC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCAGTGAGTGTGGCTATTaGGGTACCGGAGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGSECGY*GTGADL
Trigger: CAAATCAGCTCCGGTACCCAAATAGCCACACTCACT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp CGCAAGGGAATAGACATTGATGTCGTGGTAGCTGTACTGTGGCTGTaGTGGAACCGTGGCTGTACAAGTGGTGTTGGTAGCTGGTGTAGT +
Preference number: 5 (lower is better)
Translates to: RKGIDIDVVVAVLWL*WNRGCTSGVGSWCS
Trigger: ACTACACCAGCTACCAACACCACTTGTACAGCCACGGTTCCACCACAGCCACAGTACAGCTACCACGACATCAATGTCTATTCCCTTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCGAGTCAAGATTCATaGCTGGTTGGGGCGGAAGCA +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRASQDS*LVGAEA
Trigger: TGCTTCCGCCCCAACCAGCAATGAATCTTGACTCGC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGAAGCTGAAGAGCTGTTaGACTTGCTCATACTGCCCA +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLKLKSC*TCSYCP
Trigger: TGGGCAGTATGAGCAAGTCAAACAGCTCTTCAGCTT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGATGTCTGGACAGTGTTaGATAGGGAAGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLMSGQC*IGKLKS
Trigger: GCTCTTCAGCTTCCCTATCAAACACTGTCCAGACAT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCATGTCTGGACAGTGTTaGATAGGGAAGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGMSGQC*IGKLKS
Trigger: GCTCTTCAGCTTCCCTATCAAACACTGTCCAGACAT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCAACTCCAGGTGGTGGTaGTCTGGCCTTATTCATAAC +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGNSRWW*SGLIHN
Trigger: GTTATGAATAAGGCCAGACAACCACCACCTGGAGTT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGGTTGTGATAGAGCCTaGCATTTTCACAGGAGGATC +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGGCDRA*HFHRRI
Trigger: GATCCTCCTGTGAAAATGCAAGGCTCTATCACAACC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGTTGTGATAGAGCCTaGCATTTTCACAGGAGGATC +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLGCDRA*HFHRRI
Trigger: GATCCTCCTGTGAAAATGCAAGGCTCTATCACAACC...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTTACCATAGTGCTAACTaGACCAGCAAGAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: LPLLAGPASVPCSTVRPTYHSAN*TSKRSF
Trigger: AAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGTA...AGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTCGAAGAGCCTGAGCTaGAGGGTTCATGGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQSKSLS*RVHGQS
Trigger: ACTTTGGCCATGAACCCTCAAGCTCAGGCTCTTCGA...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTTTGGATACCTGTAGGTaGCTGCGCAGATCAGACAGG +
Preference number: 5 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRALDTCR*LRRSDR
Trigger: CCTGTCTGATCTGCGCAGCAACCTACAGGTATCCAA...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTTGGATACCTGTAGGTaGCTGCGCAGATCAGACAGG +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESLDTCR*LRRSDR
Trigger: CCTGTCTGATCTGCGCAGCAACCTACAGGTATCCAA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTCGATTCCCAGGTTCATaGGATACCTGTAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: DAVSSNWHLSLPLLAGPARFPGS*DTCRLL
Trigger: CAGCAACCTACAGGTATCCAATGAACCTGGGAATCG...AGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS TCA 90 bp AAGATACTCTGCCTTCTCCCTCAGGCCTGGAGGGTCATCATACTCTaGGGCTTGAGAGATCCCAGAATGCATCATAAAGTTTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: KILCLLPQAWRVIIL*GLRDPRMHHKVWAS
Trigger: GGAGGCCCAAACTTTATGATGCATTCTGGGATCTCTCAAGCCTCAGAGTATGATGACCCTCCAGGCCTGAGGGAGAAGGCAGAGTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 90 bp CTACAACCTCCAAGAGACTTCGAAGAGCCTGAGCTTGAGGGTTCATaGCCAAAGTTGGTGGGATGGCATGTAGATGTTGCTCCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: LQPPRDFEEPELEGS*PKLVGWHVDVAPVL
Trigger: CAGAACTGGAGCAACATCTACATGCCATCCCACCAACTTTGGCCATGAACCCTCAAGCTCAGGCTCTTCGAAGTCTCTTGGAGGTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000563283.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp GTATTCCTTGCTGGTGCATCTGTCCAACAAATGCAGAGAAAGCTTTaGTACTGTCGCGGCCAGCTGCTGCTGAATGGTAGAGATTCACCC +
Preference number: 5 (lower is better)
Translates to: VFLAGASVQQMQRKL*YCRGQLLLNGRDSP
Trigger: GGGTGAATCTCTACCATTCAGCAGCAGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCATTTGTTGGACAGATGCACCAGCAAGGAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAAGATTCATTGCTGGTaGGGGCGGAAGCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQKIHCW*GRKQAA
Trigger: GGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CCTTCCATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACCTCTATTGCTATATCTaGGAAGCCACCTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: PSITCWACFCPMQHCATDLYCYI*EATFLI
Trigger: AATCAAGAAGGTGGCTTCCAAGATATAGCAATAGAG...GTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAGGGGTGGAAATGCTTTaGCTGGTGACTGAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPGVEML*LVTEGY
Trigger: GTACCCCTCAGTCACCAGCAAAAGCATTTCCACCCC...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTTGGATCCAAAAGGCTaGCGTAAGGCTTCAAGAACA +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGLDPKG*RKASRT
Trigger: TGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCAA...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCCAGCAAGAGGAGCTTTaGCTGGAACCTGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GLGKSGRAERILQSVYELQQEEL*LEPGPE
Trigger: CTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCTG...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGAACGATCTGAGAAATaGGCTGCAGCTTTATCAGAG +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGERSEK*AAALSE
Trigger: CTCTGATAAAGCTGCAGCCAATTTCTCAGATCGTTC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTAACTTTCAGCCTGATTaGCTCTGGCATCCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRANFQPD*LWHPFS
Trigger: GCTGAACGGATGCCAGAGCAAATCAGGCTGAAAGTT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTGGTTCATGGCCAAAGTaGGTGGGATGGCATGTAGAT +
Preference number: 5 (lower is better)
Translates to: MQFRLTGTCPFHYLLGLLGSWPK*VGWHVD
Trigger: ATCTACATGCCATCCCACCAACTTTGGCCATGAACC...AAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGGTTCATGGCCAAAGTaGGTGGGATGGCATGTAGAT +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQGSWPK*VGWHVD
Trigger: ATCTACATGCCATCCCACCAACTTTGGCCATGAACC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGTTAAGCCATTCTCCATaGACTGCGCTAGGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLLSHSP*TALGED
Trigger: ATCTTCACCTAGCGCAGTCAATGGAGAATGGCTTAA...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGGTCTTCAGTATTCCTaGCTGGTGCATCTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESGLQYS*LVHLSN
Trigger: GTTGGACAGATGCACCAGCAAGGAATACTGAAGACC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTCGATTCCCAGGTTCATaGGATACCTGTAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRARFPGS*DTCRLL
Trigger: CAGCAACCTACAGGTATCCAATGAACCTGGGAATCG...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTAGTGAGTGTGGCTATTaGGGTACCGGAGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESSECGY*GTGADL
Trigger: CAAATCAGCTCCGGTACCCAAATAGCCACACTCACT...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTGGATGGCTTCCGTATaGGCCTCTGCAAAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESWMASV*ASAKRY
Trigger: GTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp GAGTTCGAGCCATCATTCCCAAAACCCTTGCAACCTGGGCAGCTGTaGCCTCCCGAACACCAAACTGCACGATTATATTGCGACATTCTT +
Preference number: 5 (lower is better)
Translates to: EFEPSFPKPLQPGQL*PPEHQTARLYCDIL
Trigger: AAGAATGTCGCAATATAATCGTGCAGTTTGGTGTTCGGGAGGTCACAGCTGCCCAGGTTGCAAGGGTTTTGGGAATGATGGCTCGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp GCCTTCAAGTCCTGGGCCACATCAAGTATTCGAGACAATTTGGCCTaGTCATACTGCTCCCCTCTCATGTACCATTCTGCCATTGCATGC +
Preference number: 5 (lower is better)
Translates to: AFKSWATSSIRDNLA*SYCSPLMYHSAIAC
Trigger: GCATGCAATGGCAGAATGGTACATGAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCGAATACTTGATGTGGCCCAGGACTTGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp GTTGCCCAAGCTTGCTTCATGGGCTGGGCTAAAAATCCCGTGGGCTaGCTTAAGTCATTTGTAGGTAAGAAGCCAGGAACATTGCGTGCA +
Preference number: 5 (lower is better)
Translates to: VAQACFMGWAKNPVG*LKSFVGKKPGTLRA
Trigger: TGCACGCAATGTTCCTGGCTTCTTACCTACAAATGACTTAAGTCAGCCCACGGGATTTTTAGCCCAGCCCATGAAGCAAGCTTGGGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp TGCCAAGACCACCTGGAAGCTGTGATGAAAGTCCTCCAATACCACTaGATGCAGTGGTCTGATTGGGGGTTGAAAGGGGTGGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: CQDHLEAVMKVLQYH*MQWSDWGLKGVEML
Trigger: AAGCATTTCCACCCCTTTCAACCCCCAATCAGACCACTGCATTCAGTGGTATTGGAGGACTTTCATCACAGCTTCCAGGTGGTCTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569882.1
CDS CCA 90 bp AAGGGAATAGACATTGATGTCGTGGTAGCTGTACTGTGGCTGTGGTaGAACCGTGGCTGTACAAGTGGTGTTGGTAGCTGGTGTAGTAGA +
Preference number: 5 (lower is better)
Translates to: KGIDIDVVVAVLWLW*NRGCTSGVGSWCSR
Trigger: TCTACTACACCAGCTACCAACACCACTTGTACAGCCACGGTTCCACCACAGCCACAGTACAGCTACCACGACATCAATGTCTATTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp CTGGACAGCCCGTTCAATTGCCTGACGCACACACTGCTTCAACTGTaGATGGGCCTGAAACAAGGGAATTGTTGGATTCAGAGTAATGTG +
Preference number: 5 (lower is better)
Translates to: LDSPFNCLTHTLLQL*MGLKQGNCWIQSNV
Trigger: CACATTACTCTGAATCCAACAATTCCCTTGTTTCAGGCCCATCCACAGTTGAAGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCAAGATTCATTGCTGGTaGGGGCGGAAGCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSKIHCW*GRKQAA
Trigger: GGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTT...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCACCAGGTAGCTGATTaGAGACAAGGCCAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: GWESQEELKGFFSQFMNSHQVAD*RQGQRE
Trigger: CTCTCGCTGGCCTTGTCTCAAATCAGCTACCTGGTG...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGGTGTAGGACCTCTATaGCTATATCTTGGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQGVGPL*LYLGSH
Trigger: GTGGCTTCCAAGATATAGCAATAGAGGTCCTACACC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGAGCGTCTATCTGTTCTaGTCCAACTCCAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLSVYLF*SNSKGS
Trigger: GGAGCCTTTGGAGTTGGACAAGAACAGATAGACGCT...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTACACGGGACAGCGTTCTaGGGGAAAATCTCTGCGCAG +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLHGTAF*GKISAQ
Trigger: CTGCGCAGAGATTTTCCCCAAGAACGCTGTCCCGTG...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGATGTCTGGACAGTGTTaGATAGGGAAGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQMSGQC*IGKLKS
Trigger: GCTCTTCAGCTTCCCTATCAAACACTGTCCAGACAT...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCAGCAAGAGGAGCTTTaGCTGGAACCTGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNQQEEL*LEPGPE
Trigger: CTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCTG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGTCTAATGCAAGGTTCTaGCAGAGAACCTCGATTTCA +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLSNARF*QRTSIS
Trigger: TGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAGA...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGGACAGCCCGTTCAATaGCCTGACGCACACACTGCT +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLGQPVQ*PDAHTA
Trigger: AGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTCC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGGCCCTCTACAGCCTTTaGGAGCAATCCAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKALYSL*EQSKSS
Trigger: GCTGCTCTTGGATTGCTCCAAAAGGCTGTAGAGGGC...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCCCTCTACAGCCTTTaGGAGCAATCCAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GLGKSGRAERILQSVYELALYSL*EQSKSS
Trigger: GCTGCTCTTGGATTGCTCCAAAAGGCTGTAGAGGGC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGCGGATCATGGTGGGATaGGCAGCAGGATTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQRIMVG*AAGLCC
Trigger: GCAGCACAATCCTGCTGCCAATCCCACCATGATCCG...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGGAAGGTGTGCTGCCCTaGTTGTGGATGTGCGCAATG +
Preference number: 5 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKEGVLP*LWMCAM
Trigger: CATTGCGCACATCCACAACAAGGGCAGCACACCTTC...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCGGTACCGGAGCTGATTaGCAATTGCATTCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGGTGAD*QLHSKR
Trigger: TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACC...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTTCTTGTGATCTGTTCTaGGATGGCTTCCGTATTGGC +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESSCDLF*DGFRIG
Trigger: GCCAATACGGAAGCCATCCAAGAACAGATCACAAGA...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACAGGCGGGAGAATAGCTaGAACCAGCGAAGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNRRENS*NQRRGG
Trigger: ACCTCCCCTTCGCTGGTTCAAGCTATTCTCCCGCCT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS TCA 90 bp CAAGACCACCTACTGGAAGCTGTGATGAAAGTCCTCCAATACCACTaGATGCAGTGGTCTGATTGGGGGTTGAAAGGGGTGGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: QDHLLEAVMKVLQYH*MQWSDWGLKGVEML
Trigger: AAGCATTTCCACCCCTTTCAACCCCCAATCAGACCACTGCATTCAGTGGTATTGGAGGACTTTCATCACAGCTTCCAGTAGGTGGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS TCA 90 bp AACAAATGCAGAGAAAGCTTTGGTACTGTCGCGGCCAGCTGCTGCTaGATGGTAGAGATTCACCCATTCCCTCAGAAGATACTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: NKCRESFGTVAASCC*MVEIHPFPQKILCL
Trigger: AAGGCAGAGTATCTTCTGAGGGAATGGGTGAATCTCTACCATTCAGCAGCAGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCATTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS TCA 90 bp CTTGTTCAGCAGATTAATCTTTGTGACAGTGTTGGTGGCCTCCCCTaGGTGTTTCACGAGCAGTGCAATGAGTCGAACAAAGGCATCCAG +
Preference number: 5 (lower is better)
Translates to: LVQQINLCDSVGGLP*VFHEQCNESNKGIQ
Trigger: CTGGATGCCTTTGTTCGACTCATTGCACTGCTCGTGAAACACTCAGGGGAGGCCACCAACACTGTCACAAAGATTAATCTGCTGAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 90 bp ACAAGGCCTTCAAGTCCTGGGCCACATCAAGTATTCGAGACAATTTaGCCTGATCATACTGCTCCCCTCTCATGTACCATTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: TRPSSPGPHQVFETI*PDHTAPLSCTILPL
Trigger: CAATGGCAGAATGGTACATGAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCGAATACTTGATGTGGCCCAGGACTTGAAGGCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp TGGATGGGCCTGAAACAAGGGAATTGTTGGATTCAGAGTAATGTGTaGTGCCAAGCCCGCAAGGGAATAGACATTGATGTCGTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: WMGLKQGNCWIQSNV*CQARKGIDIDVVVA
Trigger: AGCTACCACGACATCAATGTCTATTCCCTTGCGGGCTTGGCACCACACATTACTCTGAATCCAACAATTCCCTTGTTTCAGGCCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp TTCTTTCCAAAAGCTCTACCTGTCCAACAAATGCAGAGAAAGCTTTaGTACTGTCGCGGCCAGCTGCTGCTGAATGGTAGAGATTCACCC +
Preference number: 5 (lower is better)
Translates to: FFPKALPVQQMQRKL*YCRGQLLLNGRDSP
Trigger: GGGTGAATCTCTACCATTCAGCAGCAGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCATTTGTTGGACAGGTAGAGCTTTTGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568917.1
CDS-3UTR CAA 90 bp CCATGCTCTCGAATTTTATCTGTGAGCCACTTATCAAGTTTGAGGTATTCACGAAAGATTCATTGCTGGTaGGGGCGGAAGCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PCSRILSVSHLSSLRYSRKIHCW*GRKQAA
Trigger: GGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTT...TCGTGAATACCTCAAACTTGATAAGTGGCTCACAGATAAAATTCGAGAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCACCAGGTAGCTGATTaGAGACAAGGCCAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNHQVAD*RQGQRE
Trigger: CTCTCGCTGGCCTTGTCTCAAATCAGCTACCTGGTG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTCTGGAAGCTTCTGTTaGATAAACTGGGCAGCGAAA +
Preference number: 5 (lower is better)
Translates to: QECQKTWSYALRQVHGISSGSFC*INWAAK
Trigger: TTTCGCTGCCCAGTTTATCAAACAGAAGCTTCCAGA...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCCTCTATTGCTATATCTaGGAAGCCACCTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGLYCYI*EATFLI
Trigger: AATCAAGAAGGTGGCTTCCAAGATATAGCAATAGAG...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGCCATAGCCTACTTCTaGCATGAAATCAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESAIAYF*HEISQR
Trigger: TCTTTGGCTGATTTCATGCAAGAAGTAGGCTATGGC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTGTGGCAATTTCTCGATaGTCATCCTCTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: TSRLTRTTEMQFRLTGTCVAISR*SSSGGA
Trigger: AGCACCACCAGAGGATGACAATCGAGAAATTGCCAC...ACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTACCATTTAGCAGCATaGACAAGGCCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQYHLAA*TRPSSP
Trigger: AGGACTTGAAGGCCTTGTCAATGCTGCTAAATGGTA...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGCAGACAGGCCAACATaGTCGCCAAAGTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: GLGKSGRAERILQSVYELADRPT*SPKFLE
Trigger: CTCCAGAAACTTTGGCGACAATGTTGGCCTGTCTGC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGACTCCCTGCACAAGCTaGCAGACAGGCCAACATTGT +
Preference number: 5 (lower is better)
Translates to: GWESQEELKGFFSQFMNSTPCTS*QTGQHC
Trigger: ACAATGTTGGCCTGTCTGCAAGCTTGTGCAGGGAGT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGGGGGTGGAAATGCTTTaGCTGGTGACTGAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: KSGRAERILQSVYELGAVGVEML*LVTEGY
Trigger: GTACCCCTCAGTCACCAGCAAAAGCATTTCCACCCC...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAACGATCTGAGAAATaGGCTGCAGCTTTATCAGAG +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQERSEK*AAALSE
Trigger: CTCTGATAAAGCTGCAGCCAATTTCTCAGATCGTTC...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTAGTTCTTCTGGCTGCTaGACATCTTTCTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESSSSGC*TSFFGA
Trigger: TGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACT...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAGGACAGCCCGTTCAATaGCCTGACGCACACACTGCT +
Preference number: 5 (lower is better)
Translates to: KGLGKSGRAERILQSVYEGQPVQ*PDAHTA
Trigger: AGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTCC...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCATCATTTCTCTTTGTaGTGGGGAAGCAGTACGAAG +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQHHFSL*WGSSTK
Trigger: CTTCGTACTGCTTCCCCACAACAAAGAGAAATGATG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGTATCTGCGTCCTTCTaGCCTAGCATGTTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRVSASF*PSMFSQ
Trigger: CTGAGAAAACATGCTAGGCAAGAAGGACGCAGATAC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTCACCTTGTGATCTGTTaGTTGCACCATGGAGACCCA +
Preference number: 5 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVHLVIC*LHHGDP
Trigger: TGGGTCTCCATGGTGCAACAAACAGATCACAAGGTG...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTTAAGCCATTCTCCATaGACTGCGCTAGGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQLSHSP*TALGED
Trigger: ATCTTCACCTAGCGCAGTCAATGGAGAATGGCTTAA...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCATCTTTGTGACAGTGTaGGTGGCCTCCCCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: GLGKSGRAERILQSVYELIFVTV*VASPEC
Trigger: ACACTCAGGGGAGGCCACCAACACTGTCACAAAGAT...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAACATGCTCAGGTGCATaGAGTTCCAAGAGAAGCATG +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRTCSGA*SSKRSM
Trigger: CATGCTTCTCTTGGAACTCAATGCACCTGAGCATGT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGCCAGGAGCTTaGGTAGGCCTCAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQTKPGA*VGLKMW
Trigger: CCACATCTTGAGGCCTACCAAAGCTCCTGGCTTTGT...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCCCTTGTAGAGGATTaGCATAGGTTTGGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRALVED*HRFGEF
Trigger: GAACTCACCAAACCTATGCAAATCCTCTACAAGGGC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACTTTTGGAGCTGATTTGCAATaGCATTCAAAAAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: AGPASVPCSTVRPTGITFGADLQ*HSKRDS
Trigger: GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCC...AAAAGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp CAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGAGCTTTGGAATACGTTaGGGTAGAGACAAAATGGAA +
Preference number: 5 (lower is better)
Translates to: QEADPNSSWGRYPQTKGLSFGIR*GRDKME
Trigger: TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCT...CAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp CAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCCAAATGCAGTCAGCTTaGGAATACGTTTGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: QECQKTWSYALRQVHGISQMQSA*EYVWVE
Trigger: CTCTACCCAAACGTATTCCAAAGCTGACTGCATTTG...GCTGATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS TCA 90 bp GGCTGGCTCGGTAATTTTTCTTGGTTAAATTGTCCACCAGGTAGCTaGTTTGAGACAAGGCCAGCGAGAGCGAGTCAAGATTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: GWLGNFSWLNCPPGS*FETRPARASQDSLL
Trigger: CAGCAATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAATCAGCTACCTGGTGGACAATTTAACCAAGAAAAATTACCGAGCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000564557.1
ENST00000565605.5
ENST00000567188.5
ENST00000569240.5
ENST00000569916.1
CDS TCA 90 bp CAAATTTGGAGGAAAACCCTGCATACTCTGGGTGTGAGGGGCAGCTaGACCACCTATACTAAGAGATGTCATTCCAGCAAGAGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: QIWRKTLHTLGVRGS*TTYTKRCHSSKRVN
Trigger: ATTGACCCTCTTGCTGGAATGACATCTCTTAGTATAGGTGGTTCAGCTGCCCCTCACACCCAGAGTATGCAGGGTTTTCCTCCAAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS TCA 90 bp AATGCAGAACCCAAATTTGGAGGAAAACCCTGCATACTCTGGGTGTaGGGGGCAGCTGAACCACCTATACTAAGAGATGTCATTCCAGCA +
Preference number: 5 (lower is better)
Translates to: NAEPKFGGKPCILWV*GAAEPPILRDVIPA
Trigger: TGCTGGAATGACATCTCTTAGTATAGGTGGTTCAGCTGCCCCTCACACCCAGAGTATGCAGGGTTTTCCTCCAAATTTGGGTTCTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS TCA 90 bp AGTTGGCCTGGTGACCGTAACCGTTTTAGCAACAGTGGTAGTTGTTaGGGTGGTTACCATAGTGCTAACTTGACCAGCAAGAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SWPGDRNRFSNSGSC*GGYHSANLTSKRSF
Trigger: AAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGTAACCACCTCAACAACTACCACTGTTGCTAAAACGGTTACGGTCACCAGGCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
ENST00000569732.1
CDS TCA 90 bp ACTTCCATCAGCTGGGGCAATCCTTCTGGAGCATTGCCTCTGGAATaGGCATTAATCCTCATGAGGGTTTCAATGGTGTGGAACAGATCT +
Preference number: 5 (lower is better)
Translates to: TSISWGNPSGALPLE*ALILMRVSMVWNRS
Trigger: AGATCTGTTCCACACCATTGAAACCCTCATGAGGATTAATGCTCATTCCAGAGGCAATGCTCCAGAAGGATTGCCCCAGCTGATGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 90 bp CCATCGCCACTGAAATCCACATGCGAAAATAGGCAGCGTAATAAATaGCTGTCTGCCTCAGGACCGTGCCGATTCACAATATGCTGTATT +
Preference number: 5 (lower is better)
Translates to: PSPLKSTCENRQRNK*LSASGPCRFTICCI
Trigger: AATACAGCATATTGTGAATCGGCACGGTCCTGAGGCAGACAGGCATTTATTACGCTGCCTATTTTCGCATGTGGATTTCAGTGGCGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000564557.1
ENST00000565605.5
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp AGGGAAGCTGAAGAGCTGTTTGACTTGCTCATACTGCCCAACCTCTaGAAGCCTCAGCAGAGATTCAATCAAATCCAAGCTCTTCCATGT +
Preference number: 5 (lower is better)
Translates to: REAEELFDLLILPNL*KPQQRFNQIQALPC
Trigger: ACATGGAAGAGCTTGGATTTGATTGAATCTCTGCTGAGGCTTGCAGAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTTCAGCTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp ATGGGCCTGAAACAAGGGAATTGTTGGATTCAGAGTAATGTGTGGTaGCAAGCCCGCAAGGGAATAGACATTGATGTCGTGGTAGCTGTA +
Preference number: 5 (lower is better)
Translates to: MGLKQGNCWIQSNVW*QARKGIDIDVVVAV
Trigger: TACAGCTACCACGACATCAATGTCTATTCCCTTGCGGGCTTGGCACCACACATTACTCTGAATCCAACAATTCCCTTGTTTCAGGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp GAGCTGGCCTTCAGCATGTTTCCAAGGTCTATATATGAGGTCTACTaGGAACACTTCCATACCCAAACCCCTCTGAATGCCATAAACCAC +
Preference number: 5 (lower is better)
Translates to: ELAFSMFPRSIYEVY*EHFHTQTPLNAINH
Trigger: GTGGTTTATGGCATTCAGAGGGGTTTGGGTATGGAAGTGTTCCCAGTAGACCTCATATATAGACCTTGGAAACATGCTGAAGGCCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp GCTGCTAGCACTAGGAGGACGTCCTTTTGGCATAACTCCAGGTGGTaGTTGTCTGGCCTTATTCATAACATTACTGCAATTGGCTACCAT +
Preference number: 5 (lower is better)
Translates to: AASTRRTSFWHNSRW*LSGLIHNITAIGYH
Trigger: ATGGTAGCCAATTGCAGTAATGTTATGAATAAGGCCAGACAACCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCTAGTGCTAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS-3UTR CAA 90 bp GCAGCAAGGTCAATAACAAAGGCAAATGGAGTACCATTTAGCAGCATTGACAAGCACCAGGTAGCTGATTaGAGACAAGGCCAGCGAGAG +
Preference number: 5 (lower is better)
Translates to: AARSITKANGVPFSSIDKHQVAD*RQGQRE
Trigger: CTCTCGCTGGCCTTGTCTCAAATCAGCTACCTGGTG...CTTGTCAATGCTGCTAAATGGTACTCCATTTGCCTTTGTTATTGACCTTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CAA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTAAGCTGAAGAGCTGTTaGACTTGCTCATACTGCCCA +
Preference number: 5 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVKLKSC*TCSYCP
Trigger: TGGGCAGTATGAGCAAGTCAAACAGCTCTTCAGCTT...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGCAGACAGGCCAACATaGTCGCCAAAGTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNADRPT*SPKFLE
Trigger: CTCCAGAAACTTTGGCGACAATGTTGGCCTGTCTGC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGCAGACAGGCCAACATaGTCGCCAAAGTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLADRPT*SPKFLE
Trigger: CTCCAGAAACTTTGGCGACAATGTTGGCCTGTCTGC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAACTCCCTGCACAAGCTaGCAGACAGGCCAACATTGT +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLTPCTS*QTGQHC
Trigger: ACAATGTTGGCCTGTCTGCAAGCTTGTGCAGGGAGT...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGCATCAACAGACATGGTaGGATGTGGTGGATGATTAT +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQHQQTW*DVVDDY
Trigger: ATAATCATCCACCACATCCAACCATGTCTGTTGATG...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAGTGCATTGATGAGCTGGAGGTTGTAGCGATTCCCAGGTTCATTGGATACCTGTTGGATCCAAAAGGCTaGCGTAAGGCTTCAAGAACA +
Preference number: 5 (lower is better)
Translates to: QCIDELEVVAIPRFIGYLLDPKG*RKASRT
Trigger: TGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCAA...CAGGTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGCGTGTCAAGGAAGTTaGAATACAGGCTATGAAAGT +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESACQGS*NTGYES
Trigger: ACTTTCATAGCCTGTATTCAAACTTCCTTGACACGC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GACAGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCATAGAGCAATTCTTGTaGTCCTTTAACATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: DRRLIPTVVGADTHKPKGIEQFL*SFNISL
Trigger: GAGGCTTATGTTAAAGGACAACAAGAATTGCTCTAT...GCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTTCTAATGCAAGGTTCTaGCAGAGAACCTCGATTTCA +
Preference number: 5 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRASNARF*QRTSIS
Trigger: TGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAGA...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCAAACAGCCAACTGCTTaGGGTCCACACCACCAACTT +
Preference number: 5 (lower is better)
Translates to: GLGKSGRAERILQSVYELKQPTA*GPHHQL
Trigger: AAGTTGGTGGTGTGGACCCAAAGCAGTTGGCTGTTT...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGGAGCTACATCATCTGTaGCCCAAGCTTGCTTCATGG +
Preference number: 5 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKELHHL*PKLASW
Trigger: CCATGAAGCAAGCTTGGGCAACAGATGATGTAGCTC...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACCAGCATCAGCACCACTaGTGGCATCTAGTAAGCCCT +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNQHQHH*WHLVSP
Trigger: AGGGCTTACTAGATGCCACAAGTGGTGCTGATGCTG...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAAATGCAGAGAAAGCTTaGGTACTGTCGCGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLNAEKA*VLSRPA
Trigger: AGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCATT...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCATCTTTGTGACAGTGTaGGTGGCCTCCCCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFIFVTV*VASPEC
Trigger: ACACTCAGGGGAGGCCACCAACACTGTCACAAAGAT...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAACATGCTCAGGTGCATaGAGTTCCAAGAGAAGCATG +
Preference number: 5 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPTCSGA*SSKRSM
Trigger: CATGCTTCTCTTGGAACTCAATGCACCTGAGCATGT...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTACATGCTCAGGTGCATaGAGTTCCAAGAGAAGCATG +
Preference number: 5 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVTCSGA*SSKRSM
Trigger: CATGCTTCTCTTGGAACTCAATGCACCTGAGCATGT...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp CATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGCCAAATTCTGGATGGATGGCTTCCGTATaGGCCTCTGCAAAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: HSKRDSDPQCPSPQPNSGWMASV*ASAKRY
Trigger: GTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCA...TCCAGAATTTGGCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTTCTTGTGATCTGTTCTaGGATGGCTTCCGTATTGGC +
Preference number: 5 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVSCDLF*DGFRIG
Trigger: GCCAATACGGAAGCCATCCAAGAACAGATCACAAGA...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS TCA 90 bp GGAGCAGAAATACTCTGTAATGGAATGCCATCTGTTAATCCTGAATaGGTTCGAGCCATCATTCCCAAAACCCTTGCAACCTGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GAEILCNGMPSVNPE*VRAIIPKTLATWAA
Trigger: AGCTGCCCAGGTTGCAAGGGTTTTGGGAATGATGGCTCGAACTCATTCAGGATTAACAGATGGCATTCCATTACAGAGTATTTCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp GGGAGACTGTCCCTGCCCATGCCATGCATAGTGCAAAATAATAGCTaGGTTAGGATGGTTTCCAAGGAAAATTGGCATCAGAGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GRLSLPMPCIVQNNS*VRMVSKENWHQSGD
Trigger: ATCTCCACTCTGATGCCAATTTTCCTTGGAAACCATCCTAACTCAGCTATTATTTTGCACTATGCATGGCATGGGCAGGGACAGTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp GATTGGCAGCAGGATTGTGCTGCTGCTCAGCCTGAGCACGGTAACTaGTTTCAACACACATTTCAGTACACAGACGAAAGAACCTTGTTA +
Preference number: 5 (lower is better)
Translates to: DWQQDCAAAQPEHGN*FQHTFQYTDERTLL
Trigger: TAACAAGGTTCTTTCGTCTGTGTACTGAAATGTGTGTTGAAATCAGTTACCGTGCTCAGGCTGAGCAGCAGCACAATCCTGCTGCCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 90 bp AAAACCCTTGCAACCTGGGCAGCTGTGACCTCCCGAACACCAAACTaGACGATTATATTGCGACATTCTTCAATACTTGCACAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: KTLATWAAVTSRTPN*TIILRHSSILAQKP
Trigger: TGGCTTTTGTGCAAGTATTGAAGAATGTCGCAATATAATCGTGCAGTTTGGTGTTCGGGAGGTCACAGCTGCCCAGGTTGCAAGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp AGAATGCATCATAAAGTTTGGGCCTCCATGAGCACGATCAATCATTaGTTCATAGTTGGATCGCACTACTTCCATCAGCTGGGGCAATCC +
Preference number: 5 (lower is better)
Translates to: RMHHKVWASMSTINH*FIVGSHYFHQLGQS
Trigger: GGATTGCCCCAGCTGATGGAAGTAGTGCGATCCAACTATGAAGCAATGATTGATCGTGCTCATGGAGGCCCAAACTTTATGATGCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 90 bp ATACATAGGCCACCCCTTCTGCTGTGGCGTATGTGCCAGCATTCTTaGAATAAATATCCGATGGGAAATCAGTTCAAGCCAGGCATATAC +
Preference number: 5 (lower is better)
Translates to: IHRPPLLLWRMCQHS*NKYPMGNQFKPGIY
Trigger: GTATATGCCTGGCTTGAACTGATTTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACGCCACAGCAGAAGGGGTGGCCTATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp GTTTGCTTCATCATCTATCTCTTTACTAAAGTGCTGGTTTGCCTCTaGCCACACCTGAGACAAGTCCGTCTGCTGGAATGTAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: VCFIIYLFTKVLVCL*PHLRQVRLLECRLI
Trigger: AATCAGCCTACATTCCAGCAGACGGACTTGTCTCAGGTGTGGCCAGAGGCAAACCAGCACTTTAGTAAAGAGATAGATGATGAAGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGTGTACTTTGCTTAATTaGAGCACTTTACTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQCTLLN*STLLSW
Trigger: CCAGCTGAGTAAAGTGCTCAAATTAAGCAAAGTACA...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGCGTCTATCTGTTCTaGTCCAACTCCAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: KSGRAERILQSVYELGAVSVYLF*SNSKGS
Trigger: GGAGCCTTTGGAGTTGGACAAGAACAGATAGACGCT...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTGACATTCTTCAATACTaGCACAAAAGCCATAGCCTA +
Preference number: 5 (lower is better)
Translates to: LIPTVVGADTHKPKGWESDILQY*HKSHSL
Trigger: TAGGCTATGGCTTTTGTGCAAGTATTGAAGAATGTC...ACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGTGGCAATTTCTCGATaGTCATCCTCTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLVAISR*SSSGGA
Trigger: AGCACCACCAGAGGATGACAATCGAGAAATTGCCAC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAAGCCACTTATCAAGTTaGAGGTATTCACGACGTGAA +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRSHLSS*RYSRRE
Trigger: TTCACGTCGTGAATACCTCAAACTTGATAAGTGGCT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGAACTCCAGGTGGTGGTaGTCTGGCCTTATTCATAAC +
Preference number: 5 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQNSRWW*SGLIHN
Trigger: GTTATGAATAAGGCCAGACAACCACCACCTGGAGTT...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGAACTCCAGGTGGTGGTaGTCTGGCCTTATTCATAAC +
Preference number: 5 (lower is better)
Translates to: GWESQEELKGFFSQFMNSNSRWW*SGLIHN
Trigger: GTTATGAATAAGGCCAGACAACCACCACCTGGAGTT...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGTGGTCTGATTGGGGGTaGAAAGGGGTGGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: KSGRAERILQSVYELGAVWSDWG*KGVEML
Trigger: AAGCATTTCCACCCCTTTCAACCCCCAATCAGACCA...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCGTGTCAAGGAAGTTaGAATACAGGCTATGAAAGT +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRACQGS*NTGYES
Trigger: ACTTTCATAGCCTGTATTCAAACTTCCTTGACACGC...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGACTAGATTCTAAGACTTaGGCAACAAAGGGCACTACA +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRLDSKT*ATKGTT
Trigger: TGTAGTGCCCTTTGTTGCCAAAGTCTTAGAATCTAG...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGATCTAATGCAAGGTTCTaGCAGAGAACCTCGATTTCA +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRSNARF*QRTSIS
Trigger: TGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAGA...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTGCTGTACAAGTGGTGTaGGTAGCTGGTGTAGTAGAA +
Preference number: 5 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTAVQVV*VAGVVE
Trigger: TTCTACTACACCAGCTACCAACACCACTTGTACAGC...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GAACTGAGGTGGCATTACTCCAGTGAAATTGGTGAGAATCCGGGGAGCAATGTTCATCATTTCTCTTTGTaGTGGGGAAGCAGTACGAAG +
Preference number: 5 (lower is better)
Translates to: ELRWHYSSEIGENPGSNVHHFSL*WGSSTK
Trigger: CTTCGTACTGCTTCCCCACAACAAAGAGAAATGATG...AACATTGCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGGTATCTGCGTCCTTCTaGCCTAGCATGTTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKVSASF*PSMFSQ
Trigger: CTGAGAAAACATGCTAGGCAAGAAGGACGCAGATAC...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAACTTTCAGCCTGATTaGCTCTGGCATCCGTTCAGC +
Preference number: 5 (lower is better)
Translates to: KSGRAERILQSVYELGAVNFQPD*LWHPFS
Trigger: GCTGAACGGATGCCAGAGCAAATCAGGCTGAAAGTT...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAAACAGCCAACTGCTTaGGGTCCACACCACCAACTT +
Preference number: 5 (lower is better)
Translates to: LGKSGRAERILQSVYELGKQPTA*GPHHQL
Trigger: AAGTTGGTGGTGTGGACCCAAAGCAGTTGGCTGTTT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGGTTCATGGCCAAAGTaGGTGGGATGGCATGTAGAT +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQGSWPK*VGWHVD
Trigger: ATCTACATGCCATCCCACCAACTTTGGCCATGAACC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTTCGAAGAGCCTGAGCTaGAGGGTTCATGGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: TSAWHQLPLHYKVPVYVLSKSLS*RVHGQS
Trigger: ACTTTGGCCATGAACCCTCAAGCTCAGGCTCTTCGA...AAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCACCTTGTGATCTGTTaGTTGCACCATGGAGACCCA +
Preference number: 5 (lower is better)
Translates to: LGKSGRAERILQSVYELGHLVIC*LHHGDP
Trigger: TGGGTCTCCATGGTGCAACAAACAGATCACAAGGTG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGCACCTTGTGATCTGTTaGTTGCACCATGGAGACCCA +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQHLVIC*LHHGDP
Trigger: TGGGTCTCCATGGTGCAACAAACAGATCACAAGGTG...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGAGCACGATCAATCATaGCTTCATAGTTGGATCGCA +
Preference number: 5 (lower is better)
Translates to: LDGFRIGLCKKVQHGATEEHDQS*LHSWIA
Trigger: TGCGATCCAACTATGAAGCAATGATTGATCGTGCTC...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGGTCTTCAGTATTCCTaGCTGGTGCATCTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQGLQYS*LVHLSN
Trigger: GTTGGACAGATGCACCAGCAAGGAATACTGAAGACC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAAACAAAGCCAGGAGCTTaGGTAGGCCTCAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: KGLGKSGRAERILQSVYETKPGA*VGLKMW
Trigger: CCACATCTTGAGGCCTACCAAAGCTCCTGGCTTTGT...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTAGGATTTGCATAGGTTaGGTGAGTTCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRARICIG*VSSTFL
Trigger: TAGAAATGTGGAACTCACCAAACCTATGCAAATCCT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCGATTCCCAGGTTCATaGGATACCTGTAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGKSGRAERILQSVYELGRFPGS*DTCRLL
Trigger: CAGCAACCTACAGGTATCCAATGAACCTGGGAATCG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCATACCAGTTTATGTACTaGCCTTGGACACAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPYQFMY*PWTQLA
Trigger: TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTA...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTATAAAAGGGGCTGTATaGGTCCTTTCAACTTTGTCA +
Preference number: 5 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRAIKGAV*VLSTLS
Trigger: TGACAAAGTTGAAAGGACCAATACAGCCCCTTTTAT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS TCA 90 bp GGACCTCTATTGCTATATCTTGGAAGCCACCTTCTTGATTTCCACTaGCGTCTGCGTCAATGTAAGAACGCAGAAGATCTGGAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GPLLLYLGSHLLDFH*RLRQCKNAEDLEAS
Trigger: AGAAGCTTCCAGATCTTCTGCGTTCTTACATTGACGCAGACGTCAGTGGAAATCAAGAAGGTGGCTTCCAAGATATAGCAATAGAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp ACACCACCAACTTTCAGCCTGATTTGCTCTGGCATCCGTTCAGCTTaGTATGTTAAAACAACAGGATCACAGTATCTGCGTCCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: TPPTFSLICSGIRSA*YVKTTGSQYLRPSC
Trigger: GCAAGAAGGACGCAGATACTGTGATCCTGTTGTTTTAACATATCAAGCTGAACGGATGCCAGAGCAAATCAGGCTGAAAGTTGGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp CTCATGAGGGTTTCAATGGTGTGGAACAGATCTGCCTCAGTAACATaGGCAACACTCCTTTCATCCACCAGCAGGATTTTTACTAACTGC +
Preference number: 5 (lower is better)
Translates to: LMRVSMVWNRSASVT*ATLLSSTSRIFTNC
Trigger: GCAGTTAGTAAAAATCCTGCTGGTGGATGAAAGGAGTGTTGCTCATGTTACTGAGGCAGATCTGTTCCACACCATTGAAACCCTCATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 90 bp AATCATAGCCATTCCAGCTGTCAAGTTACGCATCATGTGATGAGCTaGTATTCGCATTCGAGATTCCTCCGAATCCAGGGCAAAATCCTT +
Preference number: 5 (lower is better)
Translates to: NHSHSSCQVTHHVMS*YSHSRFLRIQGKIL
Trigger: AAGGATTTTGCCCTGGATTCGGAGGAATCTCGAATGCGAATAGCAGCTCATCACATGATGCGTAACTTGACAGCTGGAATGGCTATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000566240.1
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp ATGAGCATTAATCCTCATGAGGGTTTCAATGGTGTGGAACAGATCTaGCTCAGTAACATGAGCAACACTCCTTTCATCCACCAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: MSINPHEGFNGVEQI*LSNMSNTPFIHQQD
Trigger: ATCCTGCTGGTGGATGAAAGGAGTGTTGCTCATGTTACTGAGGCAGATCTGTTCCACACCATTGAAACCCTCATGAGGATTAATGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 90 bp ATCCAAGCTCTTCCATGTGGCAATTTCTCGATTGTCATCCTCTGGTaGTGCTTTCAGAATATCAGTGGCAACAGTATGACAGGGATAGTC +
Preference number: 5 (lower is better)
Translates to: IQALPCGNFSIVILW*CFQNISGNSMTGIV
Trigger: GACTATCCCTGTCATACTGTTGCCACTGATATTCTGAAAGCACCACCAGAGGATGACAATCGAGAAATTGCCACATGGAAGAGCTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp GTTTGCTTCATCATCTATCTCTTTACTAAAGTGCTGGTTTGCCTCTaGCCACACCTGAGACAAGTCCGAAGGTTTCATCTTACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VCFIIYLFTKVLVCL*PHLRQVRRFHLTLL
Trigger: CAGCAGAGTAAGATGAAACCTTCGGACTTGTCTCAGGTGTGGCCAGAGGCAAACCAGCACTTTAGTAAAGAGATAGATGATGAAGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000569882.1
CDS CCA 90 bp TTCTGCTGTGGCGTATGTGCCAGCATTCTTGCAATAAATATCCGATaGGAAATCAGTTCAAGCCAGGCATATACAAAGCCAGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: FCCGVCASILAINIR*EISSSQAYTKPGAL
Trigger: CAAAGCTCCTGGCTTTGTATATGCCTGGCTTGAACTGATTTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACGCCACAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS-3UTR CAA 90 bp GGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGTCTGGAAGCTTCTGTTaGATAAACTGGGCAGCGAAA +
Preference number: 5 (lower is better)
Translates to: GWESQEELKGFFSQFMNSSGSFC*INWAAK
Trigger: TTTCGCTGCCCAGTTTATCAAACAGAAGCTTCCAGA...CGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGGTGTAGGACCTCTATaGCTATATCTTGGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLGVGPL*LYLGSH
Trigger: GTGGCTTCCAAGATATAGCAATAGAGGTCCTACACC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGAAGAGCTGTTTGACTaGCTCATACTGCCCAACCTC +
Preference number: 5 (lower is better)
Translates to: SECGYLGTGADLQLHSKREELFD*LILPNL
Trigger: GAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTTC...TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGAAGCTGAAGAGCTGTTaGACTTGCTCATACTGCCCA +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQKLKSC*TCSYCP
Trigger: TGGGCAGTATGAGCAAGTCAAACAGCTCTTCAGCTT...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAAGCCACTTATCAAGTTaGAGGTATTCACGACGTGAA +
Preference number: 5 (lower is better)
Translates to: LDGFRIGLCKKVQHGATESHLSS*RYSRRE
Trigger: TTCACGTCGTGAATACCTCAAACTTGATAAGTGGCT...TTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp AACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAATAACATTACTGCAATaGGCTACCATGGTGAGGATA +
Preference number: 5 (lower is better)
Translates to: NSSWGRYPQTKGLGKSGRITLLQ*ATMVRI
Trigger: TATCCTCACCATGGTAGCCAATTGCAGTAATGTTAT...TCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAATGGTCTGATTGGGGGTaGAAAGGGGTGGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: KGLGKSGRAERILQSVYEWSDWG*KGVEML
Trigger: AAGCATTTCCACCCCTTTCAACCCCCAATCAGACCA...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGGTTGTGATAGAGCCTaGCATTTTCACAGGAGGATC +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQGCDRA*HFHRRI
Trigger: GATCCTCCTGTGAAAATGCAAGGCTCTATCACAACC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAACAGCAAGAGGAGCTTTaGCTGGAACCTGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: NKMVQMQSALEYVWVETKQQEEL*LEPGPE
Trigger: CTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCTG...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGATAGAGCAATTCTTGTaGTCCTTTAACATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: IPTVVGADTHKPKGWESQIEQFL*SFNISL
Trigger: GAGGCTTATGTTAAAGGACAACAAGAATTGCTCTAT...CTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TTGGTGAGAATCCGGGGAGCAATGTTAATTTCACTCAACATGTCCACCTGGCTGCTAGATTCTAAGACTTaGGCAACAAAGGGCACTACA +
Preference number: 5 (lower is better)
Translates to: LVRIRGAMLISLNMSTWLLDSKT*ATKGTT
Trigger: TGTAGTGCCCTTTGTTGCCAAAGTCTTAGAATCTAG...CAGCCAGGTGGACATGTTGAGTGAAATTAACATTGCTCCCCGGATTCTCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCAGTTCTTCTGGCTGCTaGACATCTTTCTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GTSLCTCLGHSLHKAKKFSSSGC*TSFFGA
Trigger: TGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACT...GAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAGCTGTACAAGTGGTGTaGGTAGCTGGTGTAGTAGAA +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLAVQVV*VAGVVE
Trigger: TTCTACTACACCAGCTACCAACACCACTTGTACAGC...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGCTGTACAAGTGGTGTaGGTAGCTGGTGTAGTAGAA +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNAVQVV*VAGVVE
Trigger: TTCTACTACACCAGCTACCAACACCACTTGTACAGC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGCATCATTTCTCTTTGTaGTGGGGAAGCAGTACGAAG +
Preference number: 5 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKHHFSL*WGSSTK
Trigger: CTTCGTACTGCTTCCCCACAACAAAGAGAAATGATG...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGTATCTGCGTCCTTCTaGCCTAGCATGTTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LGKSGRAERILQSVYELGVSASF*PSMFSQ
Trigger: CTGAGAAAACATGCTAGGCAAGAAGGACGCAGATAC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTGAGCTACATCATCTGTaGCCCAAGCTTGCTTCATGG +
Preference number: 5 (lower is better)
Translates to: NQPFQENSCDLFLDGFRIELHHL*PKLASW
Trigger: CCATGAAGCAAGCTTGGGCAACAGATGATGTAGCTC...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTACTATACCAAGGACCTaGTTCAGCAGATTAATCTTT +
Preference number: 5 (lower is better)
Translates to: SSWGRYPQTKGLGKSGRATIPRT*FSRLIF
Trigger: AAAGATTAATCTGCTGAACAAGGTCCTTGGTATAGT...AGCTCTTCCTGACTTTCCCAGCCCTTTGGTTTGTGGGTATCTGCCCCAACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGCCCTTGTAGAGGATTaGCATAGGTTTGGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQALVED*HRFGEF
Trigger: GAACTCACCAAACCTATGCAAATCCTCTACAAGGGC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTCTTGTGATCTGTTCTaGGATGGCTTCCGTATTGGC +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQSCDLF*DGFRIG
Trigger: GCCAATACGGAAGCCATCCAAGAACAGATCACAAGA...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGGCTTTTTGCTATTCTTaGGGACACCAGGAATGTCAG +
Preference number: 5 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKAFCYS*GHQECQ
Trigger: CTGACATTCCTGGTGTCCCAAAGAATAGCAAAAAGC...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS TCA 90 bp ACTGAGTCTGATGGAAATCTTTGCCACTGCTTTTACCATCGCCACTaGAATCCACATGCGAAAATAGGCAGCGTAATAAATGCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: TESDGNLCHCFYHRH*NPHAKIGSVINACL
Trigger: CAGACAGGCATTTATTACGCTGCCTATTTTCGCATGTGGATTTCAGTGGCGATGGTAAAAGCAGTGGCAAAGATTTCCATCAGACTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000565605.5
ENST00000567188.5
ENST00000569240.5
CDS TCA 90 bp AGGCTTCAAGAACATATCGTAGAGCCAGACCTAGTGCCATGTAAGTaGCCAGTCCTTTCTCAATTATACCACCAAATAGGCAGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: RLQEHIVEPDLVPCK*PVLSQLYHQIGRLL
Trigger: TAACAGCCTGCCTATTTGGTGGTATAATTGAGAAAGGACTGGTCACTTACATGGCACTAGGTCTGGCTCTACGATATGTTCTTGAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS TCA 90 bp TTGCCAATCTATCAGCAGGAGGCACGTCTAGCCACCCACTCACAGTaGTTCTGTATATGGGGCAAATTCATACTACCAAGCATTAACATA +
Preference number: 5 (lower is better)
Translates to: LPIYQQEARLATHSQ*FCIWGKFILPSINI
Trigger: TATGTTAATGCTTGGTAGTATGAATTTGCCCCATATACAGAATCACTGTGAGTGGGTGGCTAGACGTGCCTCCTGCTGATAGATTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563130.5
CDS GCA 90 bp TTTAAGAACGTCAATCAAGACTTCTACATTCCATGTGTGTGCCTGTaGTCCATCACTTTTATCTTTCCCATCACTCCAGATCCCACTGCC +
Preference number: 5 (lower is better)
Translates to: FKNVNQDFYIPCVCL*SITFIFPITPDPTA
Trigger: GGCAGTGGGATCTGGAGTGATGGGAAAGATAAAAGTGATGGAGCACAGGCACACACATGGAATGTAGAAGTCTTGATTGACGTTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp CTAGTGCAGCAATCCCGAAATAATACATTTTGGATCCAAAAGGCTTaGGTAAGGCTTCAAGAACATATCGTAGAGCCAGACCTAGTGCCA +
Preference number: 5 (lower is better)
Translates to: LVQQSRNNTFWIQKA*VRLQEHIVEPDLVP
Trigger: TGGCACTAGGTCTGGCTCTACGATATGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCAAAATGTATTATTTCGGGATTGCTGCACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS GCA 90 bp GTAGTAGAAGTTGTTGTGGTTGTGATGGGAGGGAGTTCTTCTGGCTaGTTGACATCTTTCTTTGGAGCAGAGAGTTGCTCATCTAAATTC +
Preference number: 5 (lower is better)
Translates to: VVEVVVVVMGGSSSG*LTSFFGAESCSSKF
Trigger: GAATTTAGATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCCTCCCATCACAACCACAACAACTTCTACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp TTGATTTCCACTGACGTCTGCGTCAATGTAAGAACGCAGAAGATCTaGAAGCTTCTGTTTGATAAACTGGGCAGCGAAACCTCTAAGATC +
Preference number: 5 (lower is better)
Translates to: LISTDVCVNVRTQKI*KLLFDKLGSETSKI
Trigger: GATCTTAGAGGTTTCGCTGCCCAGTTTATCAAACAGAAGCTTCCAGATCTTCTGCGTTCTTACATTGACGCAGACGTCAGTGGAAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 90 bp CAAATCCAAGCTCTTCCATGTGGCAATTTCTCGATTGTCATCCTCTaGTGGTGCTTTCAGAATATCAGTGGCAACAGTATGACAGGGATA +
Preference number: 5 (lower is better)
Translates to: QIQALPCGNFSIVIL*WCFQNISGNSMTGI
Trigger: TATCCCTGTCATACTGTTGCCACTGATATTCTGAAAGCACCACCAGAGGATGACAATCGAGAAATTGCCACATGGAAGAGCTTGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATAAGCGTCTATCTGTTCTaGTCCAACTCCAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: ALPMFLDISNSSTSTFLISVYLF*SNSKGS
Trigger: GGAGCCTTTGGAGTTGGACAAGAACAGATAGACGCT...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGGCCATAGCCTACTTCTaGCATGAAATCAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: KSGRAERILQSVYELGAVAIAYF*HEISQR
Trigger: TCTTTGGCTGATTTCATGCAAGAAGTAGGCTATGGC...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATAACATTACTGCAATaGGCTACCATGGTGAGGATA +
Preference number: 5 (lower is better)
Translates to: GNSWDSNSEPFPCSWTYPITLLQ*ATMVRI
Trigger: TATCCTCACCATGGTAGCCAATTGCAGTAATGTTAT...TGGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTTGGATCCAAAAGGCTaGCGTAAGGCTTCAAGAACA +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNLDPKG*RKASRT
Trigger: TGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCAA...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTATACCATAGTGCTAACTaGACCAGCAAGAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLYHSAN*TSKRSF
Trigger: AAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGTA...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTACCATAGTGCTAACTaGACCAGCAAGAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQYHSAN*TSKRSF
Trigger: AAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGTA...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCTAGATTCTAAGACTTaGGCAACAAAGGGCACTACA +
Preference number: 5 (lower is better)
Translates to: GTSLCTCLGHSLHKAKKFLDSKT*ATKGTT
Trigger: TGTAGTGCCCTTTGTTGCCAAAGTCTTAGAATCTAG...GAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp TGCAGTGAGACCTCTAGACTGACACGTACAACAGAGATGCAGTTTCGTCTAACTCCAGGTTTTAGCTCATaGATGTCTAATGCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: CSETSRLTRTTEMQFRLTPGFSS*MSNARF
Trigger: GAACCTTGCATTAGACATCAATGAGCTAAAACCTGG...AGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGTCTAGAGGTCTCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTAGTTCTTCTGGCTGCTaGACATCTTTCTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LGKSGRAERILQSVYELGSSSGC*TSFFGA
Trigger: TGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACT...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAAAAACAGCCAACTGCTTaGGGTCCACACCACCAACTT +
Preference number: 5 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMEKQPTA*GPHHQL
Trigger: AAGTTGGTGGTGTGGACCCAAAGCAGTTGGCTGTTT...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCTTGTGATCTGTTTGTaGCACCATGGAGACCCATAT +
Preference number: 5 (lower is better)
Translates to: LGKSGRAERILQSVYELGLVICL*HHGDPY
Trigger: ATATGGGTCTCCATGGTGCAACAAACAGATCACAAG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGAGCACGATCAATCATaGCTTCATAGTTGGATCGCA +
Preference number: 5 (lower is better)
Translates to: LGKSGRAERILQSVYELGEHDQS*LHSWIA
Trigger: TGCGATCCAACTATGAAGCAATGATTGATCGTGCTC...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGAGCACGATCAATCATaGCTTCATAGTTGGATCGCA +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNEHDQS*LHSWIA
Trigger: TGCGATCCAACTATGAAGCAATGATTGATCGTGCTC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCGGTACCGGAGCTGATTaGCAATTGCATTCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: GTSLCTCLGHSLHKAKKFGTGAD*QLHSKR
Trigger: TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACC...GAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp CTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCGTTTATGTACTTGCCTaGGACACAGCTTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: LGHSLHKAKKFQTKVFSFVYVLA*DTACTK
Trigger: CTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAAC...GAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS GCA 90 bp GGGAGTTCTTCTGGCTGCTTGACATCTTTCTTTGGAGCAGAGAGTTaGTCATCTAAATTCTTCAGGCGATCTTTATCCTTTAGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: GSSSGCLTSFFGAES*SSKFFRRSLSFRRF
Trigger: AAACCTCCTAAAGGATAAAGATCGCCTGAAGAATTTAGATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp ATTCGAGATTCCTCCGAATCCAGGGCAAAATCCTTCCTGACTATTTaGTCACAAGTAGTCATGGCAATCTTAATTGATCGATCCACCACA +
Preference number: 5 (lower is better)
Translates to: IRDSSESRAKSFLTI*SQVVMAILIDRSTT
Trigger: TGTGGTGGATCGATCAATTAAGATTGCCATGACTACTTGTGAGCAAATAGTCAGGAAGGATTTTGCCCTGGATTCGGAGGAATCTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp GGGAGTTCTTCTGGCTGCTTGACATCTTTCTTTGGAGCAGAGAGTTaGTCATCTAAATTCTTCAGGCGATCTTTATCCTTTAAGTCATGC +
Preference number: 5 (lower is better)
Translates to: GSSSGCLTSFFGAES*SSKFFRRSLSFKSC
Trigger: GCATGACTTAAAGGATAAAGATCGCCTGAAGAATTTAGATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567133.1
CDS-3UTR CAA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAATCTGGAAGCTTCTGTTaGATAAACTGGGCAGCGAAA +
Preference number: 5 (lower is better)
Translates to: VVSVAIWVPELICNCIQKSGSFC*INWAAK
Trigger: TTTCGCTGCCCAGTTTATCAAACAGAAGCTTCCAGA...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp ACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGGACATTCTTCAATACTaGCACAAAAGCCATAGCCTA +
Preference number: 5 (lower is better)
Translates to: TSLCTCLGHSLHKAKKFQDILQY*HKSHSL
Trigger: TAGGCTATGGCTTTTGTGCAAGTATTGAAGAATGTC...CTGGAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTTTACTGTCACGAATTaGAAATCCAGGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQFTVTN*KSRMVQ
Trigger: CTGGACCATCCTGGATTTCAAATTCGTGACAGTAAA...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTTTACTGTCACGAATTaGAAATCCAGGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNFTVTN*KSRMVQ
Trigger: CTGGACCATCCTGGATTTCAAATTCGTGACAGTAAA...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTATTTACTGTCACGAATTaGAAATCCAGGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLFTVTN*KSRMVQ
Trigger: CTGGACCATCCTGGATTTCAAATTCGTGACAGTAAA...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TCAAGTTTGAGGTATTCACGACGTGAAGCAAGTGCAGCAAGGTCAATAACAAAGTACCATTTAGCAGCATaGACAAGGCCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SSLRYSRREASAARSITKYHLAA*TRPSSP
Trigger: AGGACTTGAAGGCCTTGTCAATGCTGCTAAATGGTA...CTTTGTTATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACAGCCACTTATCAAGTTaGAGGTATTCACGACGTGAA +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNSHLSS*RYSRRE
Trigger: TTCACGTCGTGAATACCTCAAACTTGATAAGTGGCT...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCCTCAGTATAACATTACTGCAATaGGCTACCATGGTGAGGATA +
Preference number: 5 (lower is better)
Translates to: WVPELICNCIQKEIATLSITLLQ*ATMVRI
Trigger: TATCCTCACCATGGTAGCCAATTGCAGTAATGTTAT...ACTGAGGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAATGGTCTGATTGGGGGTaGAAAGGGGTGGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAEWSDWG*KGVEML
Trigger: AAGCATTTCCACCCCTTTCAACCCCCAATCAGACCA...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCATCAACAGACATGGTaGGATGTGGTGGATGATTAT +
Preference number: 5 (lower is better)
Translates to: KSGRAERILQSVYELGAVHQQTW*DVVDDY
Trigger: ATAATCATCCACCACATCCAACCATGTCTGTTGATG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGGCGTGTCAAGGAAGTTaGAATACAGGCTATGAAAGT +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQACQGS*NTGYES
Trigger: ACTTTCATAGCCTGTATTCAAACTTCCTTGACACGC...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGCCAGGTTTTAGCTCATaGATGTCTAATGCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: KSGRAERILQSVYELGAVPGFSS*MSNARF
Trigger: GAACCTTGCATTAGACATCAATGAGCTAAAACCTGG...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CATTCAAAAAGAGATAGCGACCCTCAGTGTCCAAGTCCACAGCCAAATTCTGGATCAGCTCAAATTCAGTaGCTAATCTCTTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: HSKRDSDPQCPSPQPNSGSAQIQ*LISCPS
Trigger: AGATGGACAAGAGATTAGCAACTGAATTTGAGCTGA...TCCAGAATTTGGCTGTGGACTTGGACACTGAGGGTCGCTATCTCTTTTTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTTGTGATCTGTTTGTaGCACCATGGAGACCCATAT +
Preference number: 5 (lower is better)
Translates to: KGLGKSGRAERILQSVYELVICL*HHGDPY
Trigger: ATATGGGTCTCCATGGTGCAACAAACAGATCACAAG...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAACTTGTGATCTGTTTGTaGCACCATGGAGACCCATAT +
Preference number: 5 (lower is better)
Translates to: VVSVAIWVPELICNCIQKLVICL*HHGDPY
Trigger: ATATGGGTCTCCATGGTGCAACAAACAGATCACAAG...TTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp AAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAATTAAGCCATTCTCCATaGACTGCGCTAGGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: KGLGKSGRAERILQSVYELSHSP*TALGED
Trigger: ATCTTCACCTAGCGCAGTCAATGGAGAATGGCTTAA...TTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAAGCCCTTGTAGAGGATTaGCATAGGTTTGGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMEALVED*HRFGEF
Trigger: GAACTCACCAAACCTATGCAAATCCTCTACAAGGGC...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATTGGATACCTGTAGGTaGCTGCGCAGATCAGACAGG +
Preference number: 5 (lower is better)
Translates to: NKMVQMQSALEYVWVETKLDTCR*LRRSDR
Trigger: CCTGTCTGATCTGCGCAGCAACCTACAGGTATCCAA...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGAGCTGATTTGCAATaGCATTCAAAAAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: GLGKSGRAERILQSVYELGADLQ*HSKRDS
Trigger: GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCC...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGGTACCGGAGCTGATTaGCAATTGCATTCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNGTGAD*QLHSKR
Trigger: TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAATGCCTTGGACACAGCTaGCACAAAGCCAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAECLGHS*HKAKKF
Trigger: GAACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCA...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS CCA 90 bp GTGCAATGGATTATCAATGGCATAGGACAGCGTCGAGATAAAATTTaGCTTTGTAATCAGCAACGCACACTCCTGAATCAGAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: VQWIINGIGQRRDKI*LCNQQRTLLNQKLS
Trigger: ACTCAGTTTCTGATTCAGGAGTGTGCGTTGCTGATTACAAAGCCAAATTTTATCTCGACGCTGTCCTATGCCATTGATAATCCATTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp CTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTCTCTATTGCTATATCTaGGAAGCCACCTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: LGKSGRAERILQSVYELGLYCYI*EATFLI
Trigger: AATCAAGAAGGTGGCTTCCAAGATATAGCAATAGAG...ACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCACATCCACATTTTTAATAGCCATAGCCTACTTCTaGCATGAAATCAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: ALPMFLDISNSSTSTFLIAIAYF*HEISQR
Trigger: TCTTTGGCTGATTTCATGCAAGAAGTAGGCTATGGC...TATTAAAAATGTGGATGTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAAGAAGAGCTGTTTGACTaGCTCATACTGCCCAACCTC +
Preference number: 5 (lower is better)
Translates to: NKMVQMQSALEYVWVETKEELFD*LILPNL
Trigger: GAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTTC...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCATAGAGCAATTCTTGTaGTCCTTTAACATAAGCCTC +
Preference number: 5 (lower is better)
Translates to: GLGKSGRAERILQSVYELIEQFL*SFNISL
Trigger: GAGGCTTATGTTAAAGGACAACAAGAATTGCTCTAT...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp GAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTCAGCTCAAATTCAGTaGCTAATCTCTTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: ESQEELKGFFSQFMNSVQSAQIQ*LISCPS
Trigger: AGATGGACAAGAGATTAGCAACTGAATTTGAGCTGA...CTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGAATGCAGAGAAAGCTTaGGTACTGTCGCGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMNAEKA*VLSRPA
Trigger: AGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCATT...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp CAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGACTATACCAAGGACCTaGTTCAGCAGATTAATCTTT +
Preference number: 5 (lower is better)
Translates to: QGTSLCTCLGHSLHKAKKTIPRT*FSRLIF
Trigger: AAAGATTAATCTGCTGAACAAGGTCCTTGGTATAGT...CTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp GGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCACTATACCAAGGACCTaGTTCAGCAGATTAATCTTT +
Preference number: 5 (lower is better)
Translates to: GLGKSGRAERILQSVYELTIPRT*FSRLIF
Trigger: AAAGATTAATCTGCTGAACAAGGTCCTTGGTATAGT...GAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAAGATGTGGAATGTATaGCAGAAAGCTGTAAGTGTC +
Preference number: 5 (lower is better)
Translates to: KSGRAERILQSVYELGAVKMWNV*QKAVSV
Trigger: GACACTTACAGCTTTCTGCAATACATTCCACATCTT...CACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp AGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGTGCAGTGAGACCTCTAAGGATTTGCATAGGTTaGGTGAGTTCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: RAERILQSVYELGAVRPLRICIG*VSSTFL
Trigger: TAGAAATGTGGAACTCACCAAACCTATGCAAATCCT...TAGAGGTCTCACTGCACCGAGTTCATAAACTGACTGAAGAATCCTTTCAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TTCTACTGCAGTCTTCTGAATAAAACAGCAAGCCAACTCACAATTGTCCTGAGCCATCATTTCTCTTTGTaGTGGGGAAGCAGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: FYCSLLNKTASQLTIVLSHHFSL*WGSSLN
Trigger: ATTCAGACTGCTTCCCCACAACAAAGAGAAATGATG...GCTCAGGACAATTGTGAGTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS TCA 90 bp TCAGGCGATCTTTATCCTTTAGGAGGTTTCCAGGTTTTAGCTCATTaGTGTCTAATGCAAGGTTCTTGCAGAGAACCTCGATTTCAAACT +
Preference number: 5 (lower is better)
Translates to: SGDLYPLGGFQVLAH*CLMQGSCREPRFQT
Trigger: AGTTTGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAGACATCAATGAGCTAAAACCTGGAAACCTCCTAAAGGATAAAGATCGCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 90 bp GGTTGGATGTGGTGGATGATTATATATTCGCTGGAAATAGCTGTTTaGTTCATCATCTATCTCTTTACTAAAGTGCTGGTTTGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GWMWWMIIYSLEIAV*FIIYLFTKVLVCLW
Trigger: CCAGAGGCAAACCAGCACTTTAGTAAAGAGATAGATGATGAAGCAAACAGCTATTTCCAGCGAATATATAATCATCCACCACATCCAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
ENST00000569882.1
CDS GCA 90 bp AGCTGTAAGTGTCTGGAAATTAATGGTTTCCAACACATGCTCAGGTaGATTGAGTTCCAAGAGAAGCATGATAAAAATTCGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: SCKCLEINGFQHMLR*IEFQEKHDKNSMVG
Trigger: CCCTACCATCGAATTTTTATCATGCTTCTCTTGGAACTCAATGCACCTGAGCATGTGTTGGAAACCATTAATTTCCAGACACTTACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS-3UTR CAA 90 bp ACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTTGTACTTTGCTTAATTaGAGCACTTTACTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TSAWHQLPLHYKVPVYVLCTLLN*STLLSW
Trigger: CCAGCTGAGTAAAGTGCTCAAATTAAGCAAAGTACA...AAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AATCAACCGTTCCAAGAGAACTCTTGTGATCTGTTCTTGGATGGCTTCCGTATTTGTACTTTGCTTAATTaGAGCACTTTACTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NQPFQENSCDLFLDGFRICTLLN*STLLSW
Trigger: CCAGCTGAGTAAAGTGCTCAAATTAAGCAAAGTACA...AATACGGAAGCCATCCAAGAACAGATCACAAGAGTTCTCTTGGAACGGTTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp GATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATGGAACATCAACAGACATGGTaGGATGTGGTGGATGATTAT +
Preference number: 5 (lower is better)
Translates to: DGTNAVSFGIRLGRDKMEHQQTW*DVVDDY
Trigger: ATAATCATCCACCACATCCAACCATGTCTGTTGATG...TTCCATTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp ACTTTAATGGTTAGCTACAGTATGCATACACATACAAGAAGTAGGGGAGCTGAAGAACGATCTGAGAAATaGGCTGCAGCTTTATCAGAG +
Preference number: 5 (lower is better)
Translates to: TLMVSYSMHTHTRSRGAEERSEK*AAALSE
Trigger: CTCTGATAAAGCTGCAGCCAATTTCTCAGATCGTTC...TTCAGCTCCCCTACTTCTTGTATGTGTATGCATACTGTAGCTAACCATTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAGTTTATGAACGTGTGTAAGATGGGTTaGTTTTTAGCTAATGTGATC +
Preference number: 5 (lower is better)
Translates to: KGWESQEELKGFFSQFMNVCKMG*FLANVI
Trigger: GATCACATTAGCTAAAAACAAACCCATCTTACACAC...GTTCATAAACTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS-3UTR CAA 90 bp TTTGTTGTGGGGAAGCAGTCTGAATTATTAACCATGATATCTGAGACTCAAAACGTATCTGCGTCCTTCTaGCCTAGCATGTTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: FVVGKQSELLTMISETQNVSASF*PSMFSQ
Trigger: CTGAGAAAACATGCTAGGCAAGAAGGACGCAGATAC...GTTTTGAGTCTCAGATATCATGGTTAATAATTCAGACTGCTTCCCCACAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS-3UTR CAA 90 bp TGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCAAGATGTGGAATGTATaGCAGAAAGCTGTAAGTGTC +
Preference number: 5 (lower is better)
Translates to: CGYLGTGADLQLHSKRDSKMWNV*QKAVSV
Trigger: GACACTTACAGCTTTCTGCAATACATTCCACATCTT...GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGAGTGAGTGTGGCTATTaGGGTACCGGAGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMSECGY*GTGADL
Trigger: CAAATCAGCTCCGGTACCCAAATAGCCACACTCACT...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGTGGATGGCTTCCGTATaGGCCTCTGCAAAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMWMASV*ASAKRY
Trigger: GTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCA...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACGACATTCTTCAATACTaGCACAAAAGCCATAGCCTA +
Preference number: 5 (lower is better)
Translates to: SSMKVIRRPQGCGLFTINDILQY*HKSHSL
Trigger: TAGGCTATGGCTTTTGTGCAAGTATTGAAGAATGTC...GTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp AATGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTACCATTTAGCAGCATaGACAAGGCCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: NGGEQLINEIWFPFLYSHYHLAA*TRPSSP
Trigger: AGGACTTGAAGGCCTTGTCAATGCTGCTAAATGGTA...GTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp TCATGGTTCCAGAACTTAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAATATACCATTTAGCAGCATaGACAAGGCCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SWFQNLNAGFLISSMKVIYHLAA*TRPSSP
Trigger: AGGACTTGAAGGCCTTGTCAATGCTGCTAAATGGTA...TATTACCTTCATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGGAACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS-3UTR CAA 90 bp TCTCGAATTTTATCTGTGAGCCACTTATCAAGTTTGAGGTATTCACGACGTGAAAGCCACTTATCAAGTTaGAGGTATTCACGACGTGAA +
Preference number: 5 (lower is better)
Translates to: SRILSVSHLSSLRYSRRESHLSS*RYSRRE
Trigger: TTCACGTCGTGAATACCTCAAACTTGATAAGTGGCT...TTCACGTCGTGAATACCTCAAACTTGATAAGTGGCTCACAGATAAAATTCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565605.5
CDS-3UTR CAA 90 bp AGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGTGTGTAAGATGGGTTaGTTTTTAGCTAATGTGATC +
Preference number: 5 (lower is better)
Translates to: SECGYLGTGADLQLHSKRVCKMG*FLANVI
Trigger: GATCACATTAGCTAAAAACAAACCCATCTTACACAC...TCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCACACTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567188.5
CDS TCA 90 bp AATTCAGGATTCTTCAGCGTGTCAAGGAAGTTTGAATACAGGCTATaGAAGTTTGGCTCAATACTGACTCTCTTCATAACCAGATACTGT +
Preference number: 5 (lower is better)
Translates to: NSGFFSVSRKFEYRL*KFGSILTLFITRYC
Trigger: ACAGTATCTGGTTATGAAGAGAGTCAGTATTGAGCCAAACTTTCATAGCCTGTATTCAAACTTCCTTGACACGCTGAAGAATCCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
CDS GCA 90 bp TTGCAGAAAGCTGTAAGTGTCTGGAAATTAATGGTTTCCAACACATaGTCAGGTGCATTGAGTTCCAAGAGAAGCATGATAAAAATTCGA +
Preference number: 5 (lower is better)
Translates to: LQKAVSVWKLMVSNT*SGALSSKRSMIKIR
Trigger: TCGAATTTTTATCATGCTTCTCTTGGAACTCAATGCACCTGAGCATGTGTTGGAAACCATTAATTTCCAGACACTTACAGCTTTCTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 90 bp CAGTTCTGTAATACACTTATCATAAATCTGAGCTACATCATCTGTTaGCCAAGCTTGCTGTTTTACAGAAGGAAACAACCAACAAGAGAC +
Preference number: 5 (lower is better)
Translates to: QFCNTLIINLSYIIC*PSLLFYRRKQPTRD
Trigger: GTCTCTTGTTGGTTGTTTCCTTCTGTAAAACAGCAAGCTTGGGCAACAGATGATGTAGCTCAGATTTATGATAAGTGTATTACAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563283.1
CDS-3UTR CAA 90 bp TATGTTAAAACAACAGGATCACAGTATCTGCGTCCTTCTTGCCTAGCATGTTTTTCAGCTCAAATTCAGTaGCTAATCTCTTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: YVKTTGSQYLRPSCLACFSAQIQ*LISCPS
Trigger: AGATGGACAAGAGATTAGCAACTGAATTTGAGCTGA...AAAACATGCTAGGCAAGAAGGACGCAGATACTGTGATCCTGTTGTTTTAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566240.1
CDS TCA 90 bp AACCATCTTGTTAAATTCAGGATTCTTCAGCGTGTCAAGGAAGTTTaGATACAGGCTATGAAAGTTTGGCTCAATACTGACTCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: NHLVKFRILQRVKEV*IQAMKVWLNTDSLH
Trigger: ATGAAGAGAGTCAGTATTGAGCCAAACTTTCATAGCCTGTATTCAAACTTCCTTGACACGCTGAAGAATCCTGAATTTAACAAGATGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
CDS CCA 90 bp TACTCTGTTCTGAAACATGGCACATTTGGTCTTCATCCCATTTCCTaGCATACAACTTCTAAGATCCTTAGAATGGTAAGTTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: YSVLKHGTFGLHPIS*HTTSKILRMVSFFL
Trigger: CAAAAAGAAACTTACCATTCTAAGGATCTTAGAAGTTGTATGCCAGGAAATGGGATGAAGACCAAATGTGCCATGTTTCAGAACAGAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568158.1
ENST00000569020.5
CDS-3UTR CAA 90 bp GTATGGCCATTCATTCAGTGGGGTAATGGGGGAGAACAATTAATTAATGAGATTGTGTGTAAGATGGGTTaGTTTTTAGCTAATGTGATC +
Preference number: 5 (lower is better)
Translates to: VWPFIQWGNGGEQLINEIVCKMG*FLANVI
Trigger: GATCACATTAGCTAAAAACAAACCCATCTTACACAC...AATCTCATTAATTAATTGTTCTCCCCCATTACCCCACTGAATGAATGGCCATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGCCAGGTTTTAGCTCATaGATGTCTAATGCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMPGFSS*MSNARF
Trigger: GAACCTTGCATTAGACATCAATGAGCTAAAACCTGG...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAATCAGCTCAAATTCAGTaGCTAATCTCTTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: NKMVQMQSALEYVWVETKSAQIQ*LISCPS
Trigger: AGATGGACAAGAGATTAGCAACTGAATTTGAGCTGA...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AATAAGATGGTACAAATGCAGTCAGCTTTGGAATACGTTTGGGTAGAGACAAAAAGGATTTGCATAGGTTaGGTGAGTTCCACATTTCTA +
Preference number: 5 (lower is better)
Translates to: NKMVQMQSALEYVWVETKRICIG*VSSTFL
Trigger: TAGAAATGTGGAACTCACCAAACCTATGCAAATCCT...TTTTGTCTCTACCCAAACGTATTCCAAAGCTGACTGCATTTGTACCATCTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp TACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGTCAGGGAGCTGATTTGCAATaGCATTCAAAAAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: YIIFKLAFCYSLGHQECQGADLQ*HSKRDS
Trigger: GCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCC...CTGACATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp TACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGTCAGATTCAAACTGGCTTTTaGCTATTCTTTGGGACACCA +
Preference number: 5 (lower is better)
Translates to: YIIFKLAFCYSLGHQECQIQTGF*LFFGTP
Trigger: TGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAAT...CTGACATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS-3UTR CAA 90 bp AAGTTACATAATATTCAAACTGGCTTTTTGCTATTCTTTGGGACACCAGGAATGAAGATGTGGAATGTATaGCAGAAAGCTGTAAGTGTC +
Preference number: 5 (lower is better)
Translates to: KLHNIQTGFLLFFGTPGMKMWNV*QKAVSV
Trigger: GACACTTACAGCTTTCTGCAATACATTCCACATCTT...CATTCCTGGTGTCCCAAAGAATAGCAAAAAGCCAGTTTGAATATTATGTAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317147.10
CDS GCA 72 bp TTGAGACAAGGCCAGCGAGAGCGAGTCAAGATTCATTaGTGGTTGGGGCGGAAGCAGGCGGCCGAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: LRQGQRERVKIH*WLGRKQAAEPG
Trigger: GCCGGGCTCGGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000564557.1
ENST00000565605.5
ENST00000565697.1
ENST00000567188.5
ENST00000569020.5
ENST00000569240.5
ENST00000569916.1
CDS CAA 90 bp GATTTGAGACAAGGCCAGCGAGAGCGAGTCAAGATTCATTGCTGGTaGGGGCGGAAGCAGGCGGCCGAGCCCGGCGCAAAATCACCATTA +
Preference number: 6 (lower is better)
Translates to: DLRQGQRERVKIHCW*GRKQAAEPGAKSPL
Trigger: TAATGGTGATTTTGCGCCGGGCTCGGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000564557.1
ENST00000565605.5
ENST00000565697.1
ENST00000567188.5
ENST00000569020.5
ENST00000569240.5
ENST00000569916.1
CDS GCA 72 bp CACAGGATGGACCAGCTCCTGGACAGCCCGTTCAATTaGCTGACGCACACACTGCTTCAACTGTGGATGGGC +
Preference number: 6 (lower is better)
Translates to: HRMDQLLDSPFN*LTHTLLQLWMG
Trigger: GCCCATCCACAGTTGAAGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTCCAGGAGCTGGTCCATCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp CCACAGGATGGACCAGCTCCTGGACAGCCCGTTCAATaGCCTGACGCACACACTGCTTCAACTGTGGATGGG +
Preference number: 6 (lower is better)
Translates to: PQDGPAPGQPVQ*PDAHTASTVDG
Trigger: CCCATCCACAGTTGAAGCAGTGTGTGCGTCAGGCAATTGAACGGGCTGTCCAGGAGCTGGTCCATCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp TACCATAGTGCTAACTTGACCAGCAAGAGGAGCTTTTaGTGGAACCTGGGCCTGAGCCTGGGCCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: YHSANLTSKRSF*WNLGLSLGLSQ
Trigger: CTGGCTCAGGCCCAGGCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
ENST00000569732.1
CDS CCA 72 bp GGTTGTGATAGCACTTGGCTCGGATCATGGTGGGATTaGCAGCAGGATTGTGCTGCTGCTCAGCCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: GCDSTWLGSWWD*QQDCAAAQPEH
Trigger: GTGCTCAGGCTGAGCAGCAGCACAATCCTGCTGCCAATCCCACCATGATCCGAGCCAAGTGCTATCACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 72 bp GGAGTCCAAGAGCACCAGTTCCTATACCAGTCAGGCTaGCTGTGCCAAGACCACCTACTGGAAGCTGTGATG +
Preference number: 6 (lower is better)
Translates to: GVQEHQFLYQSG*LCQDHLLEAVM
Trigger: CATCACAGCTTCCAGTAGGTGGTCTTGGCACAGGCAGCCTGACTGGTATAGGAACTGGTGCTCTTGGACTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS GCA 72 bp TTGTTGCACCATGGAGACCCATATGCCCGGCCATCCTaGAGAGCTTTTAGGACCAAGAGGTGGCATTCCCTG +
Preference number: 6 (lower is better)
Translates to: LLHHGDPYARPS*RAFRTKRWHSL
Trigger: CAGGGAATGCCACCTCTTGGTCCTAAAAGCTCTGCAGGATGGCCGGGCATATGGGTCTCCATGGTGCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563283.1
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 72 bp CATCCAGGTTGTGATAGCACTTGGCTCGGATCATGGTaGGATTGGCAGCAGGATTGTGCTGCTGCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: HPGCDSTWLGSW*DWQQDCAAAQP
Trigger: AGGCTGAGCAGCAGCACAATCCTGCTGCCAATCCCACCATGATCCGAGCCAAGTGCTATCACAACCTGGATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 72 bp AGGCATCCAGGTTGTGATAGCACTTGGCTCGGATCATaGTGGGATTGGCAGCAGGATTGTGCTGCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: RHPGCDSTWLGS*WDWQQDCAAAQ
Trigger: CTGAGCAGCAGCACAATCCTGCTGCCAATCCCACCATGATCCGAGCCAAGTGCTATCACAACCTGGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 72 bp GGAGTCCAAGAGCACCAGTTCCTATACCAGTCAGGCTaGCTGTGCCAAGACCACCTGGAAGCTGTGATGAAA +
Preference number: 6 (lower is better)
Translates to: GVQEHQFLYQSG*LCQDHLEAVMK
Trigger: TTTCATCACAGCTTCCAGGTGGTCTTGGCACAGGCAGCCTGACTGGTATAGGAACTGGTGCTCTTGGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569882.1
CDS CCA 72 bp GACATTGATGTCGTGGTAGCTGTACTGTGGCTGTGGTaGAACCGTGGCTGTACAAGTGGTGTTGGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: DIDVVVAVLWLW*NRGCTSGVGSW
Trigger: CCAGCTACCAACACCACTTGTACAGCCACGGTTCCACCACAGCCACAGTACAGCTACCACGACATCAATGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp TGGTGGCCTCCCCTGAGTGTTTCACGAGCAGTGCAATaGGTCGAACAAAGGCATCCAGGTTGTGATAGCACT +
Preference number: 6 (lower is better)
Translates to: WWPPLSVSRAVQ*VEQRHPGCDST
Trigger: AGTGCTATCACAACCTGGATGCCTTTGTTCGACTCATTGCACTGCTCGTGAAACACTCAGGGGAGGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 72 bp GCATTTAGTAGGCAGGGGCCAGGAAAGCTGTTAGGCTaGAGAGATCCCATTCCACTTGACTTGCCCACTGAA +
Preference number: 6 (lower is better)
Translates to: AFSRQGPGKLLG*RDPIPLDLPTE
Trigger: TTCAGTGGGCAAGTCAAGTGGAATGGGATCTCTGCAGCCTAACAGCTTTCCTGGCCCCTGCCTACTAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563130.5
CDS CAA 90 bp GCTCCTGAGAAACACTCCCTGCACAAGCTTGCAGACAGGCCAACATaGTCGCCAAAGTTTCTGGAGGAAGTTGAGCACTTTTGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: APEKHSLHKLADRPT*SPKFLEEVEHFWAG
Trigger: ACCAGCCCAAAAGTGCTCAACTTCCTCCAGAAACTTTGGCGACAATGTTGGCCTGTCTGCAAGCTTGTGCAGGGAGTGTTTCTCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS TCA 72 bp CCATCATTCCCAAAACCCTTGCAACCTGGGCAGCTGTaGCCTCCCGAACACCAAACTGCACGATTATATTGC +
Preference number: 6 (lower is better)
Translates to: PSFPKPLQPGQL*PPEHQTARLYC
Trigger: GCAATATAATCGTGCAGTTTGGTGTTCGGGAGGTCACAGCTGCCCAGGTTGCAAGGGTTTTGGGAATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp CCATTCTGCCATTGCATGCATGATAAGTTGGCGAATTaGGGGAGACTGTCCCTGCCCATGCCATGCATAGTG +
Preference number: 6 (lower is better)
Translates to: PFCHCMHDKLAN*GRLSLPMPCIV
Trigger: CACTATGCATGGCATGGGCAGGGACAGTCTCCCTCAATTCGCCAACTTATCATGCATGCAATGGCAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp GTGGTAGTTGTTGAGGTGGTTACCATAGTGCTAACTTaGCCAGCAAGAGGAGCTTTTGCTGGAACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: VVVVEVVTIVLT*PARGAFAGTWA
Trigger: GGCCCAGGTTCCAGCAAAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGTAACCACCTCAACAACTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
ENST00000569732.1
CDS TCA 72 bp TCCCTCAGGCCTGGAGGGTCATCATACTCTGAGGCTTaGGAGATCCCAGAATGCATCATAAAGTTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: SLRPGGSSYSEA*EIPECIIKFGP
Trigger: AGGCCCAAACTTTATGATGCATTCTGGGATCTCTCAAGCCTCAGAGTATGATGACCCTCCAGGCCTGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS TCA 72 bp CACCTGGAAGCTGTGATGAAAGTCCTCCAATACCACTaGATGCAGTGGTCTGATTGGGGGTTGAAAGGGGTG +
Preference number: 6 (lower is better)
Translates to: HLEAVMKVLQYH*MQWSDWGLKGV
Trigger: CACCCCTTTCAACCCCCAATCAGACCACTGCATTCAGTGGTATTGGAGGACTTTCATCACAGCTTCCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569882.1
CDS GCA 72 bp ATGGTAGAGATTCACCCATTCCCTCAGAAGATACTCTaGCTTCTCCCTCAGGCCTGGAGGGTCATCATACTC +
Preference number: 6 (lower is better)
Translates to: MVEIHPFPQKIL*LLPQAWRVIIL
Trigger: GAGTATGATGACCCTCCAGGCCTGAGGGAGAAGGCAGAGTATCTTCTGAGGGAATGGGTGAATCTCTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 72 bp TGGTGGAACCGTGGCTGTACAAGTGGTGTTGGTAGCTaGTGTAGTAGAAGTTGTTGTGGTTGTGATGGGAGG +
Preference number: 6 (lower is better)
Translates to: WWNRGCTSGVGS*CSRSCCGCDGR
Trigger: CCTCCCATCACAACCACAACAACTTCTACTACACCAGCTACCAACACCACTTGTACAGCCACGGTTCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp ATAGACATTGATGTCGTGGTAGCTGTACTGTGGCTGTaGTGGAACCGTGGCTGTACAAGTGGTGTTGGTAGC +
Preference number: 6 (lower is better)
Translates to: IDIDVVVAVLWL*WNRGCTSGVGS
Trigger: GCTACCAACACCACTTGTACAGCCACGGTTCCACCACAGCCACAGTACAGCTACCACGACATCAATGTCTAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp TTCGAAGAGCCTGAGCTTGAGGGTTCATGGCCAAAGTaGGTGGGATGGCATGTAGATGTTGCTCCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: FEEPELEGSWPK*VGWHVDVAPVL
Trigger: CAGAACTGGAGCAACATCTACATGCCATCCCACCAACTTTGGCCATGAACCCTCAAGCTCAGGCTCTTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000563283.1
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp AACTACAACCTCCAAGAGACTTCGAAGAGCCTGAGCTaGAGGGTTCATGGCCAAAGTTGGTGGGATGGCATG +
Preference number: 6 (lower is better)
Translates to: NYNLQETSKSLS*RVHGQSWWDGM
Trigger: CATGCCATCCCACCAACTTTGGCCATGAACCCTCAAGCTCAGGCTCTTCGAAGTCTCTTGGAGGTTGTAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000563283.1
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp TCTCGACATTCAATTAGGCACCTTGTGATCTGTTTGTaGCACCATGGAGACCCATATGCCCGGCCATCCTGC +
Preference number: 6 (lower is better)
Translates to: SRHSIRHLVICL*HHGDPYARPSC
Trigger: GCAGGATGGCCGGGCATATGGGTCTCCATGGTGCAACAAACAGATCACAAGGTGCCTAATTGAATGTCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563283.1
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CAA 90 bp ACCAGCATGTCTGGACAGTGTTTGATAGGGAAGCTGAAGAGCTGTTaGACTTGCTCATACTGCCCAACCTCTGCAAGCCTCAGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: TSMSGQCLIGKLKSC*TCSYCPTSASLSRD
Trigger: ATCTCTGCTGAGGCTTGCAGAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTTCAGCTTCCCTATCAAACACTGTCCAGACATGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp TCCTGGGCCACATCAAGTATTCGAGACAATTTGGCCTaGTCATACTGCTCCCCTCTCATGTACCATTCTGCC +
Preference number: 6 (lower is better)
Translates to: SWATSSIRDNLA*SYCSPLMYHSA
Trigger: GGCAGAATGGTACATGAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCGAATACTTGATGTGGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp AGGAAAACCCTGCATACTCTGGGTGTGAGGGGCAGCTaGACCACCTATACTAAGAGATGTCATTCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: RKTLHTLGVRGS*TTYTKRCHSSK
Trigger: CTTGCTGGAATGACATCTCTTAGTATAGGTGGTTCAGCTGCCCCTCACACCCAGAGTATGCAGGGTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS TCA 72 bp CCCAAATTTGGAGGAAAACCCTGCATACTCTGGGTGTaGGGGGCAGCTGAACCACCTATACTAAGAGATGTC +
Preference number: 6 (lower is better)
Translates to: PKFGGKPCILWV*GAAEPPILRDV
Trigger: GACATCTCTTAGTATAGGTGGTTCAGCTGCCCCTCACACCCAGAGTATGCAGGGTTTTCCTCCAAATTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS TCA 72 bp CTACTGGAAGCTGTGATGAAAGTCCTCCAATACCACTaGATGCAGTGGTCTGATTGGGGGTTGAAAGGGGTG +
Preference number: 6 (lower is better)
Translates to: LLEAVMKVLQYH*MQWSDWGLKGV
Trigger: CACCCCTTTCAACCCCCAATCAGACCACTGCATTCAGTGGTATTGGAGGACTTTCATCACAGCTTCCAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS TCA 72 bp AGCTGGGGCAATCCTTCTGGAGCATTGCCTCTGGAATaGGCATTAATCCTCATGAGGGTTTCAATGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SWGNPSGALPLE*ALILMRVSMVW
Trigger: CCACACCATTGAAACCCTCATGAGGATTAATGCTCATTCCAGAGGCAATGCTCCAGAAGGATTGCCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS TCA 72 bp AGAGAAAGCTTTGGTACTGTCGCGGCCAGCTGCTGCTaGATGGTAGAGATTCACCCATTCCCTCAGAAGATA +
Preference number: 6 (lower is better)
Translates to: RESFGTVAASCC*MVEIHPFPQKI
Trigger: TATCTTCTGAGGGAATGGGTGAATCTCTACCATTCAGCAGCAGCTGGCCGCGACAGTACCAAAGCTTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 72 bp TACTGCTCCCCTCTCATGTACCATTCTGCCATTGCATaGATGATAAGTTGGCGAATTGAGGGAGACTGTCCC +
Preference number: 6 (lower is better)
Translates to: YCSPLMYHSAIA*MISWRIEGDCP
Trigger: GGGACAGTCTCCCTCAATTCGCCAACTTATCATGCATGCAATGGCAGAATGGTACATGAGAGGGGAGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp GCCCAGTTTCCTCTGTACAAAAGGGTCGTTATTCACTaGAGGGAGTCCAAGAGCACCAGTTCCTATACCAGT +
Preference number: 6 (lower is better)
Translates to: AQFPLYKRVVIH*RESKSTSSYTS
Trigger: ACTGGTATAGGAACTGGTGCTCTTGGACTCCCTGCAGTGAATAACGACCCTTTTGTACAGAGGAAACTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
ENST00000569882.1
CDS GCA 72 bp CATTCCAGCTGTCAAGTTACGCATCATGTGATGAGCTaGTATTCGCATTCGAGATTCCTCCGAATCCAGGGC +
Preference number: 6 (lower is better)
Translates to: HSSCQVTHHVMS*YSHSRFLRIQG
Trigger: GCCCTGGATTCGGAGGAATCTCGAATGCGAATAGCAGCTCATCACATGATGCGTAACTTGACAGCTGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000566240.1
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp CTCATGTACCATTCTGCCATTGCATGCATGATAAGTTaGCGAATTGAGGGAGACTGTCCCTGCCCATGCCAT +
Preference number: 6 (lower is better)
Translates to: LMYHSAIACMIS*RIEGDCPCPCH
Trigger: ATGGCATGGGCAGGGACAGTCTCCCTCAATTCGCCAACTTATCATGCATGCAATGGCAGAATGGTACATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp AAGGGAATAGACATTGATGTCGTGGTAGCTGTACTGTaGCTGTGGTGGAACCGTGGCTGTACAAGTGGTGTT +
Preference number: 6 (lower is better)
Translates to: KGIDIDVVVAVL*LWWNRGCTSGV
Trigger: AACACCACTTGTACAGCCACGGTTCCACCACAGCCACAGTACAGCTACCACGACATCAATGTCTATTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp CCGTTCAATTGCCTGACGCACACACTGCTTCAACTGTaGATGGGCCTGAAACAAGGGAATTGTTGGATTCAG +
Preference number: 6 (lower is better)
Translates to: PFNCLTHTLLQL*MGLKQGNCWIQ
Trigger: CTGAATCCAACAATTCCCTTGTTTCAGGCCCATCCACAGTTGAAGCAGTGTGTGCGTCAGGCAATTGAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp GGCCTCCATGAGCACGATCAATCATTGCTTCATAGTTaGATCGCACTACTTCCATCAGCTGGGGCAATCCTT +
Preference number: 6 (lower is better)
Translates to: GLHEHDQSLLHS*IALLPSAGAIL
Trigger: AAGGATTGCCCCAGCTGATGGAAGTAGTGCGATCCAACTATGAAGCAATGATTGATCGTGCTCATGGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 72 bp AAAGCTCTACCTGTCCAACAAATGCAGAGAAAGCTTTaGTACTGTCGCGGCCAGCTGCTGCTGAATGGTAGA +
Preference number: 6 (lower is better)
Translates to: KALPVQQMQRKL*YCRGQLLLNGR
Trigger: TCTACCATTCAGCAGCAGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCATTTGTTGGACAGGTAGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568917.1
CDS TCA 72 bp AGAGCTGGCCTTCAGCATGTTTCCAAGGTCTATATATaGGGTCTACTGGGAACACTTCCATACCCAAACCCC +
Preference number: 6 (lower is better)
Translates to: RAGLQHVSKVYI*GLLGTLPYPNP
Trigger: GGGGTTTGGGTATGGAAGTGTTCCCAGTAGACCTCATATATAGACCTTGGAAACATGCTGAAGGCCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp TCCGAAGGTTTCATCTTACTCTGCTGGAATGTAGGCTaGTTCAGTCCAGAGGTGCCCAGTTTCCTCTGTACA +
Preference number: 6 (lower is better)
Translates to: SEGFILLCWNVG*FSPEVPSFLCT
Trigger: TGTACAGAGGAAACTGGGCACCTCTGGACTGAATCAGCCTACATTCCAGCAGAGTAAGATGAAACCTTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000569882.1
CDS TCA 72 bp GCTTGCTTCATGGGCTGGGCTAAAAATCCCGTGGGCTaGCTTAAGTCATTTGTAGGTAAGAAGCCAGGAACA +
Preference number: 6 (lower is better)
Translates to: ACFMGWAKNPVG*LKSFVGKKPGT
Trigger: TGTTCCTGGCTTCTTACCTACAAATGACTTAAGTCAGCCCACGGGATTTTTAGCCCAGCCCATGAAGCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp GCAACCTGGGCAGCTGTGACCTCCCGAACACCAAACTaGACGATTATATTGCGACATTCTTCAATACTTGCA +
Preference number: 6 (lower is better)
Translates to: ATWAAVTSRTPN*TIILRHSSILA
Trigger: TGCAAGTATTGAAGAATGTCGCAATATAATCGTGCAGTTTGGTGTTCGGGAGGTCACAGCTGCCCAGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp ATAGGGAAGCTGAAGAGCTGTTTGACTTGCTCATACTaGCCAACCTCTGCAAGCCTCAGCAGAGATTCAATC +
Preference number: 6 (lower is better)
Translates to: IGKLKSCLTCSY*PTSASLSRDSI
Trigger: GATTGAATCTCTGCTGAGGCTTGCAGAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTTCAGCTTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp GTTGTTGTGGTTGTGATGGGAGGGAGTTCTTCTGGCTaGTTGACATCTTTCTTTGGAGCAGAGAGTTGCTCA +
Preference number: 6 (lower is better)
Translates to: VVVVVMGGSSSG*LTSFFGAESCS
Trigger: TGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCCTCCCATCACAACCACAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp CCACCCCTTCTGCTGTGGCGTATGTGCCAGCATTCTTaGAATAAATATCCGATGGGAAATCAGTTCAAGCCA +
Preference number: 6 (lower is better)
Translates to: PPLLLWRMCQHS*NKYPMGNQFKP
Trigger: TGGCTTGAACTGATTTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACGCCACAGCAGAAGGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp AGAAGGTGGCACATCTTTCTTAAAGCTGACTCCAGTTaGCCTGGTGACCGTAACCGTTTTAGCAACAGTGGT +
Preference number: 6 (lower is better)
Translates to: RRWHIFLKADSS*PGDRNRFSNSG
Trigger: ACCACTGTTGCTAAAACGGTTACGGTCACCAGGCCAACTGGAGTCAGCTTTAAGAAAGATGTGCCACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
CDS CAA 72 bp AGAGGAGATGGGAGAGGAGGAGGTGTAGGACCTCTATaGCTATATCTTGGAAGCCACCTTCTTGATTTCCAC +
Preference number: 6 (lower is better)
Translates to: RGDGRGGGVGPL*LYLGSHLLDFH
Trigger: GTGGAAATCAAGAAGGTGGCTTCCAAGATATAGCAATAGAGGTCCTACACCTCCTCCTCTCCCATCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 90 bp GCTAGCACTAGGAGGACGTCCTTTTGGCATAACTCCAGGTGGTGGTaGTCTGGCCTTATTCATAACATTACTGCAATTGGCTACCATGGT +
Preference number: 6 (lower is better)
Translates to: ASTRRTSFWHNSRWW*SGLIHNITAIGYHG
Trigger: ACCATGGTAGCCAATTGCAGTAATGTTATGAATAAGGCCAGACAACCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCTAGTGCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS CAA 90 bp ACTATACCAAGGACCTTGTTCAGCAGATTAATCTTTGTGACAGTGTaGGTGGCCTCCCCTGAGTGTTTCACGAGCAGTGCAATGAGTCGA +
Preference number: 6 (lower is better)
Translates to: TIPRTLFSRLIFVTV*VASPECFTSSAMSR
Trigger: TCGACTCATTGCACTGCTCGTGAAACACTCAGGGGAGGCCACCAACACTGTCACAAAGATTAATCTGCTGAACAAGGTCCTTGGTATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS TCA 72 bp GGTGACCGTAACCGTTTTAGCAACAGTGGTAGTTGTTaGGGTGGTTACCATAGTGCTAACTTGACCAGCAAG +
Preference number: 6 (lower is better)
Translates to: GDRNRFSNSGSC*GGYHSANLTSK
Trigger: CTTGCTGGTCAAGTTAGCACTATGGTAACCACCTCAACAACTACCACTGTTGCTAAAACGGTTACGGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
ENST00000569732.1
CDS TCA 72 bp CAGATTAATCTTTGTGACAGTGTTGGTGGCCTCCCCTaGGTGTTTCACGAGCAGTGCAATGAGTCGAACAAA +
Preference number: 6 (lower is better)
Translates to: QINLCDSVGGLP*VFHEQCNESNK
Trigger: TTTGTTCGACTCATTGCACTGCTCGTGAAACACTCAGGGGAGGCCACCAACACTGTCACAAAGATTAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 72 bp CTGAAATCCACATGCGAAAATAGGCAGCGTAATAAATaGCTGTCTGCCTCAGGACCGTGCCGATTCACAATA +
Preference number: 6 (lower is better)
Translates to: LKSTCENRQRNK*LSASGPCRFTI
Trigger: TATTGTGAATCGGCACGGTCCTGAGGCAGACAGGCATTTATTACGCTGCCTATTTTCGCATGTGGATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000564557.1
ENST00000565605.5
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp TGCATACATAGGCCACCCCTTCTGCTGTGGCGTATGTaGCAGCATTCTTGCAATAAATATCCGATGGGAAAT +
Preference number: 6 (lower is better)
Translates to: CIHRPPLLLWRM*QHSCNKYPMGN
Trigger: ATTTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACGCCACAGCAGAAGGGGTGGCCTATGTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp TCAAGTCCTGGGCCACATCAAGTATTCGAGACAATTTaGCCTGATCATACTGCTCCCCTCTCATGTACCATT +
Preference number: 6 (lower is better)
Translates to: SSPGPHQVFETI*PDHTAPLSCTI
Trigger: AATGGTACATGAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCGAATACTTGATGTGGCCCAGGACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp AGCACTAGGAGGACGTCCTTTTGGCATAACTCCAGGTaGTGGTTGTCTGGCCTTATTCATAACATTACTGCA +
Preference number: 6 (lower is better)
Translates to: STRRTSFWHNSR*WLSGLIHNITA
Trigger: TGCAGTAATGTTATGAATAAGGCCAGACAACCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCTAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS CCA 72 bp AGAAGTTGTTGTGGTTGTGATGGGAGGGAGTTCTTCTaGCTGCTTGACATCTTTCTTTGGAGCAGAGAGTTG +
Preference number: 6 (lower is better)
Translates to: RSCCGCDGREFF*LLDIFLWSREL
Trigger: CAACTCTCTGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCCTCCCATCACAACCACAACAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp CCTCTACAGCCTTTTGGAGCAATCCAAGAGCAGCTATaGCATCCCGAGAGTTTCGAGATAAAACTACAACCT +
Preference number: 6 (lower is better)
Translates to: PLQPFGAIQEQL*HPESFEIKLQP
Trigger: AGGTTGTAGTTTTATCTCGAAACTCTCGGGATGCCATAGCTGCTCTTGGATTGCTCCAAAAGGCTGTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563283.1
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 72 bp ATCATCTATCTCTTTACTAAAGTGCTGGTTTGCCTCTaGCCACACCTGAGACAAGTCCGTCTGCTGGAATGT +
Preference number: 6 (lower is better)
Translates to: IIYLFTKVLVCL*PHLRQVRLLEC
Trigger: ACATTCCAGCAGACGGACTTGTCTCAGGTGTGGCCAGAGGCAAACCAGCACTTTAGTAAAGAGATAGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS CAA 72 bp AGGAGGACGTCCTTTTGGCATAACTCCAGGTGGTGGTaGTCTGGCCTTATTCATAACATTACTGCAATTGGC +
Preference number: 6 (lower is better)
Translates to: RRTSFWHNSRWW*SGLIHNITAIG
Trigger: GCCAATTGCAGTAATGTTATGAATAAGGCCAGACAACCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS GCA 72 bp AAACAAGGGAATTGTTGGATTCAGAGTAATGTGTGGTaGCAAGCCCGCAAGGGAATAGACATTGATGTCGTG +
Preference number: 6 (lower is better)
Translates to: KQGNCWIQSNVW*QARKGIDIDVV
Trigger: CACGACATCAATGTCTATTCCCTTGCGGGCTTGGCACCACACATTACTCTGAATCCAACAATTCCCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp AATCCTCATGAGGGTTTCAATGGTGTGGAACAGATCTaGCTCAGTAACATGAGCAACACTCCTTTCATCCAC +
Preference number: 6 (lower is better)
Translates to: NPHEGFNGVEQI*LSNMSNTPFIH
Trigger: GTGGATGAAAGGAGTGTTGCTCATGTTACTGAGGCAGATCTGTTCCACACCATTGAAACCCTCATGAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 72 bp CATAAAGTTTGGGCCTCCATGAGCACGATCAATCATTaGTTCATAGTTGGATCGCACTACTTCCATCAGCTG +
Preference number: 6 (lower is better)
Translates to: HKVWASMSTINH*FIVGSHYFHQL
Trigger: CAGCTGATGGAAGTAGTGCGATCCAACTATGAAGCAATGATTGATCGTGCTCATGGAGGCCCAAACTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 72 bp TTCAGCATGTTTCCAAGGTCTATATATGAGGTCTACTaGGAACACTTCCATACCCAAACCCCTCTGAATGCC +
Preference number: 6 (lower is better)
Translates to: FSMFPRSIYEVY*EHFHTQTPLNA
Trigger: GGCATTCAGAGGGGTTTGGGTATGGAAGTGTTCCCAGTAGACCTCATATATAGACCTTGGAAACATGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp GCTCTTCCATGTGGCAATTTCTCGATTGTCATCCTCTaGTGGTGCTTTCAGAATATCAGTGGCAACAGTATG +
Preference number: 6 (lower is better)
Translates to: ALPCGNFSIVIL*WCFQNISGNSM
Trigger: CATACTGTTGCCACTGATATTCTGAAAGCACCACCAGAGGATGACAATCGAGAAATTGCCACATGGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp ATCAAGCCAATGACTAATATCACTCATGTACTTGAGTaGCCAATCTATCAGCAGGAGGCACGTCTAGCCACC +
Preference number: 6 (lower is better)
Translates to: IKPMTNITHVLE*PIYQQEARLAT
Trigger: GGTGGCTAGACGTGCCTCCTGCTGATAGATTGGCAACTCAAGTACATGAGTGATATTAGTCATTGGCTTGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563130.5
CDS CAA 90 bp CCTAGCCAATGTCCCAAGTTCTTCAGCAAAGAACGATCTGAGAAATaGGCTGCAGCTTTATCAGAGGTCAGGAGCACTTTAATGTTTCTG +
Preference number: 6 (lower is better)
Translates to: PSQCPKFFSKERSEK*AAALSEVRSTLMFL
Trigger: CAGAAACATTAAAGTGCTCCTGACCTCTGATAAAGCTGCAGCCAATTTCTCAGATCGTTCTTTGCTGAAGAACTTGGGACATTGGCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 90 bp GTAGAAGTTGTTGTGGTTGTGATGGGAGGGAGTTCTTCTGGCTGCTaGACATCTTTCTTTGGAGCAGAGAGTTGCTCATCTAAATTCTTC +
Preference number: 6 (lower is better)
Translates to: VEVVVVVMGGSSSGC*TSFFGAESCSSKFF
Trigger: GAAGAATTTAGATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAGCAGCCAGAAGAACTCCCTCCCATCACAACCACAACAACTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp GGTAATTTTTCTTGGTTAAATTGTCCACCAGGTAGCTaGTTTGAGACAAGGCCAGCGAGAGCGAGTCAAGAT +
Preference number: 6 (lower is better)
Translates to: GNFSWLNCPPGS*FETRPARASQD
Trigger: ATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAATCAGCTACCTGGTGGACAATTTAACCAAGAAAAATTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000564557.1
ENST00000565605.5
ENST00000565697.1
ENST00000567188.5
ENST00000569240.5
ENST00000569916.1
CDS TCA 72 bp CTGTTTGATAAACTGGGCAGCGAAACCTCTAAGATCTaGGCTGGAAGAATTCAACAGGGCAAGGCCAAAAAT +
Preference number: 6 (lower is better)
Translates to: LFDKLGSETSKI*AGRIQQGKAKN
Trigger: ATTTTTGGCCTTGCCCTGTTGAATTCTTCCAGCTCAGATCTTAGAGGTTTCGCTGCCCAGTTTATCAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp TTGCTATATCTTGGAAGCCACCTTCTTGATTTCCACTaGCGTCTGCGTCAATGTAAGAACGCAGAAGATCTG +
Preference number: 6 (lower is better)
Translates to: LLYLGSHLLDFH*RLRQCKNAEDL
Trigger: CAGATCTTCTGCGTTCTTACATTGACGCAGACGTCAGTGGAAATCAAGAAGGTGGCTTCCAAGATATAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp TCCCTGCCCATGCCATGCATAGTGCAAAATAATAGCTaGGTTAGGATGGTTTCCAAGGAAAATTGGCATCAG +
Preference number: 6 (lower is better)
Translates to: SLPMPCIVQNNS*VRMVSKENWHQ
Trigger: CTGATGCCAATTTTCCTTGGAAACCATCCTAACTCAGCTATTATTTTGCACTATGCATGGCATGGGCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp GAACATATCGTAGAGCCAGACCTAGTGCCATGTAAGTaGCCAGTCCTTTCTCAATTATACCACCAAATAGGC +
Preference number: 6 (lower is better)
Translates to: EHIVEPDLVPCK*PVLSQLYHQIG
Trigger: GCCTATTTGGTGGTATAATTGAGAAAGGACTGGTCACTTACATGGCACTAGGTCTGGCTCTACGATATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS CCA 72 bp GATTGTCATCCTCTGGTGGTGCTTTCAGAATATCAGTaGCAACAGTATGACAGGGATAGTCAGCAAAACAGA +
Preference number: 6 (lower is better)
Translates to: DCHPLVVLSEYQ*QQYDRDSQQNR
Trigger: TCTGTTTTGCTGACTATCCCTGTCATACTGTTGCCACTGATATTCTGAAAGCACCACCAGAGGATGACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp CTTCCATGTGGCAATTTCTCGATTGTCATCCTCTGGTaGTGCTTTCAGAATATCAGTGGCAACAGTATGACA +
Preference number: 6 (lower is better)
Translates to: LPCGNFSIVILW*CFQNISGNSMT
Trigger: TGTCATACTGTTGCCACTGATATTCTGAAAGCACCACCAGAGGATGACAATCGAGAAATTGCCACATGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CCA 72 bp ACTAGGAGGACGTCCTTTTGGCATAACTCCAGGTGGTaGTTGTCTGGCCTTATTCATAACATTACTGCAATT +
Preference number: 6 (lower is better)
Translates to: TRRTSFWHNSRW*LSGLIHNITAI
Trigger: AATTGCAGTAATGTTATGAATAAGGCCAGACAACCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569882.1
CDS CCA 72 bp ATCATCTATCTCTTTACTAAAGTGCTGGTTTGCCTCTaGCCACACCTGAGACAAGTCCGAAGGTTTCATCTT +
Preference number: 6 (lower is better)
Translates to: IIYLFTKVLVCL*PHLRQVRRFHL
Trigger: AAGATGAAACCTTCGGACTTGTCTCAGGTGTGGCCAGAGGCAAACCAGCACTTTAGTAAAGAGATAGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000569882.1
CDS CCA 72 bp GGCGTATGTGCCAGCATTCTTGCAATAAATATCCGATaGGAAATCAGTTCAAGCCAGGCATATACAAAGCCA +
Preference number: 6 (lower is better)
Translates to: GVCASILAINIR*EISSSQAYTKP
Trigger: TGGCTTTGTATATGCCTGGCTTGAACTGATTTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 72 bp CAAAATTACATGCTGGCAGCCGATAGGGTCATAAATTaGTCTGACTCCGCCTTCAGTGTTTTGTGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: QNYMLAADRVIN*SDSAFSVLCVS
Trigger: AGAAACACACAAAACACTGAAGGCGGAGTCAGACCAATTTATGACCCTATCGGCTGCCAGCATGTAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563130.5
CDS CAA 72 bp ATCAGTTCAAGCCAGGCATATACAAAGCCAGGAGCTTaGGTAGGCCTCAAGATGTGGAATGTATTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: ISSSQAYTKPGA*VGLKMWNVLQK
Trigger: TTTCTGCAATACATTCCACATCTTGAGGCCTACCAAAGCTCCTGGCTTTGTATATGCCTGGCTTGAACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS TCA 72 bp ATACTCTGTAATGGAATGCCATCTGTTAATCCTGAATaGGTTCGAGCCATCATTCCCAAAACCCTTGCAACC +
Preference number: 6 (lower is better)
Translates to: ILCNGMPSVNPE*VRAIIPKTLAT
Trigger: GGTTGCAAGGGTTTTGGGAATGATGGCTCGAACTCATTCAGGATTAACAGATGGCATTCCATTACAGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp ACTTTCAGCCTGATTTGCTCTGGCATCCGTTCAGCTTaGTATGTTAAAACAACAGGATCACAGTATCTGCGT +
Preference number: 6 (lower is better)
Translates to: TFSLICSGIRSA*YVKTTGSQYLR
Trigger: ACGCAGATACTGTGATCCTGTTGTTTTAACATATCAAGCTGAACGGATGCCAGAGCAAATCAGGCTGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp CACACATTTCAGTACACAGACGAAAGAACCTTGTTATaGGATCATCGGTCTTCAGTATTCCTTGCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: HTFQYTDERTLL*DHRSSVFLAGA
Trigger: TGCACCAGCAAGGAATACTGAAGACCGATGATCTCATAACAAGGTTCTTTCGTCTGTGTACTGAAATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS GCA 72 bp TCCTCCGAATCCAGGGCAAAATCCTTCCTGACTATTTaGTCACAAGTAGTCATGGCAATCTTAATTGATCGA +
Preference number: 6 (lower is better)
Translates to: SSESRAKSFLTI*SQVVMAILIDR
Trigger: TCGATCAATTAAGATTGCCATGACTACTTGTGAGCAAATAGTCAGGAAGGATTTTGCCCTGGATTCGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567133.1
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp ATCAAATCCAAGCTCTTCCATGTGGCAATTTCTCGATaGTCATCCTCTGGTGGTGCTTTCAGAATATCAGTG +
Preference number: 6 (lower is better)
Translates to: IKSKLFHVAISR*SSSGGAFRISV
Trigger: CACTGATATTCTGAAAGCACCACCAGAGGATGACAATCGAGAAATTGCCACATGGAAGAGCTTGGATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp CTGGATATTTTCTGGGGGCTCCACAATTCTCTCAGTTaGATCTGTGGCCACAAGCAACGTATCTATATTTGT +
Preference number: 6 (lower is better)
Translates to: LDIFWGLHNSLS*ICGHKQRIYIC
Trigger: ACAAATATAGATACGTTGCTTGTGGCCACAGATCAAACTGAGAGAATTGTGGAGCCCCCAGAAAATATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
CDS TCA 72 bp GATGGAAATCTTTGCCACTGCTTTTACCATCGCCACTaGAATCCACATGCGAAAATAGGCAGCGTAATAAAT +
Preference number: 6 (lower is better)
Translates to: DGNLCHCFYHRH*NPHAKIGSVIN
Trigger: ATTTATTACGCTGCCTATTTTCGCATGTGGATTTCAGTGGCGATGGTAAAAGCAGTGGCAAAGATTTCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000565605.5
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp GCAAAACAGAAGATCTCTGGATTTATAAGGGAATGTTaGATGAAGGAGAGCTGGCCTTCAGCATGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: AKQKISGFIREC*MKESWPSACFQ
Trigger: TTGGAAACATGCTGAAGGCCAGCTCTCCTTCATTCAACATTCCCTTATAAATCCAGAGATCTTCTGTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS TCA 72 bp TGGATATTTTCTGGGGGCTCCACAATTCTCTCAGTTTaGTCTGTGGCCACAAGCAACGTATCTATATTTGTA +
Preference number: 6 (lower is better)
Translates to: WIFSGGSTILSV*SVATSNVSIFV
Trigger: TACAAATATAGATACGTTGCTTGTGGCCACAGATCAAACTGAGAGAATTGTGGAGCCCCCAGAAAATATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
CDS TCA 72 bp GTGTTTCTTTGCATTTCAACATCCTTGGACCACACCTaGATATTCTCCACAAATGCCCAATGGTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VFLCISTSLDHT*IFSTNAQWFFF
Trigger: GAAGAAGAACCATTGGGCATTTGTGGAGAATATTCAGGTGTGGTCCAAGGATGTTGAAATGCAAAGAAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563130.5
CDS GCA 72 bp CAATCCCGAAATAATACATTTTGGATCCAAAAGGCTTaGGTAAGGCTTCAAGAACATATCGTAGAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: QSRNNTFWIQKA*VRLQEHIVEPD
Trigger: GTCTGGCTCTACGATATGTTCTTGAAGCCTTACGCAAGCCTTTTGGATCCAAAATGTATTATTTCGGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000562046.1
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS GCA 72 bp GCTGTAAGTGTCTGGAAATTAATGGTTTCCAACACATaGTCAGGTGCATTGAGTTCCAAGAGAAGCATGATA +
Preference number: 6 (lower is better)
Translates to: AVSVWKLMVSNT*SGALSSKRSMI
Trigger: TATCATGCTTCTCTTGGAACTCAATGCACCTGAGCATGTGTTGGAAACCATTAATTTCCAGACACTTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CCA 72 bp ATTATCAATGGCATAGGACAGCGTCGAGATAAAATTTaGCTTTGTAATCAGCAACGCACACTCCTGAATCAG +
Preference number: 6 (lower is better)
Translates to: IINGIGQRRDKI*LCNQQRTLLNQ
Trigger: CTGATTCAGGAGTGTGCGTTGCTGATTACAAAGCCAAATTTTATCTCGACGCTGTCCTATGCCATTGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp GCAAGGCCAAAAATTACCTCTTGTACTTTGCTTAATTaGAGCACTTTACTCAGCTGGGCAAATAAGTGGGGT +
Preference number: 6 (lower is better)
Translates to: ARPKITSCTLLN*STLLSWANKWG
Trigger: ACCCCACTTATTTGCCCAGCTGAGTAAAGTGCTCAAATTAAGCAAAGTACAAGAGGTAATTTTTGGCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp TTCTTCAATACTTGCACAAAAGCCATAGCCTACTTCTaGCATGAAATCAGCCAAAGAGCTCTCCATCATGGT +
Preference number: 6 (lower is better)
Translates to: FFNTCTKAIAYF*HEISQRALHHG
Trigger: ACCATGATGGAGAGCTCTTTGGCTGATTTCATGCAAGAAGTAGGCTATGGCTTTTGTGCAAGTATTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 90 bp ATTGCGACATTCTTCAATACTTGCACAAAAGCCATAGCCTACTTCTaGCATGAAATCAGCCAAAGAGCTCTCCATCATGGTTTTAGCTAC +
Preference number: 6 (lower is better)
Translates to: IATFFNTCTKAIAYF*HEISQRALHHGFSY
Trigger: GTAGCTAAAACCATGATGGAGAGCTCTTTGGCTGATTTCATGCAAGAAGTAGGCTATGGCTTTTGTGCAAGTATTGAAGAATGTCGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 90 bp TTCAGGCGATCTTTATCCTTTAGGAGGTTTCCAGGTTTTAGCTCATaGATGTCTAATGCAAGGTTCTTGCAGAGAACCTCGATTTCAAAC +
Preference number: 6 (lower is better)
Translates to: FRRSLSFRRFPGFSS*MSNARFLQRTSISN
Trigger: GTTTGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAGACATCAATGAGCTAAAACCTGGAAACCTCCTAAAGGATAAAGATCGCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 90 bp ATTGAGTTCCAAGAGAAGCATGATAAAAATTCGATGGTAGGGAAGTaGCTGAAATTCACTCTGACGAACATCATGATCCTGAAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: IEFQEKHDKNSMVGK*LKFTLTNIMILKEN
Trigger: GTTCTCCTTCAGGATCATGATGTTCGTCAGAGTGAATTTCAGCAACTTCCCTACCATCGAATTTTTATCATGCTTCTCTTGGAACTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS TCA 72 bp TTCTTCAGCGTGTCAAGGAAGTTTGAATACAGGCTATaGAAGTTTGGCTCAATACTGACTCTCTTCATAACC +
Preference number: 6 (lower is better)
Translates to: FFSVSRKFEYRL*KFGSILTLFIT
Trigger: GGTTATGAAGAGAGTCAGTATTGAGCCAAACTTTCATAGCCTGTATTCAAACTTCCTTGACACGCTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000567285.1
ENST00000569240.5
CDS CCA 72 bp ATCTCTGCAGCATTTCTAATACCTCATCAACAGACATaGTTGGATGTGGTGGATGATTATATATTCGCTGGA +
Preference number: 6 (lower is better)
Translates to: ISAAFLIPHQQT*LDVVDDYIFAG
Trigger: TCCAGCGAATATATAATCATCCACCACATCCAACCATGTCTGTTGATGAGGTATTAGAAATGCTGCAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS CCA 72 bp ATCAGGATACTCATCAACAGACATGGTTGGATGTGGTaGATGATTATATATTCGCTGGAAATAGCTGTTTGC +
Preference number: 6 (lower is better)
Translates to: IRILINRHGWMW*MIIYSLEIAVC
Trigger: GCAAACAGCTATTTCCAGCGAATATATAATCATCCACCACATCCAACCATGTCTGTTGATGAGTATCCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562046.1
CDS CAA 72 bp ATCATAAATCTGAGCTACATCATCTGTTGCCCAAGCTaGCTGTTTTACAGAAGGAAACAACCAACAAGAGAC +
Preference number: 6 (lower is better)
Translates to: IINLSYIICCPS*LFYRRKQPTRD
Trigger: GTCTCTTGTTGGTTGTTTCCTTCTGTAAAACAGCAAGCTTGGGCAACAGATGATGTAGCTCAGATTTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563283.1
CDS GCA 72 bp TGTCTGGAAATTAATGGTTTCCAACACATGCTCAGGTaGATTGAGTTCCAAGAGAAGCATGATAAAAATTCG +
Preference number: 6 (lower is better)
Translates to: CLEINGFQHMLR*IEFQEKHDKNS
Trigger: CGAATTTTTATCATGCTTCTCTTGGAACTCAATGCACCTGAGCATGTGTTGGAAACCATTAATTTCCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CAA 72 bp TCTGCAGCATTTCTAATACCTCATCAACAGACATGGTaGGATGTGGTGGATGATTATATATTCGCTGGAAAT +
Preference number: 6 (lower is better)
Translates to: SAAFLIPHQQTW*DVVDDYIFAGN
Trigger: ATTTCCAGCGAATATATAATCATCCACCACATCCAACCATGTCTGTTGATGAGGTATTAGAAATGCTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS CAA 72 bp CCAGGTTTTAGCTCATTGATGTCTAATGCAAGGTTCTaGCAGAGAACCTCGATTTCAAACTTCAAGTTTAAC +
Preference number: 6 (lower is better)
Translates to: PGFSSLMSNARF*QRTSISNFKFN
Trigger: GTTAAACTTGAAGTTTGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAGACATCAATGAGCTAAAACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS CAA 72 bp TGGAAATTAATGGTTTCCAACACATGCTCAGGTGCATaGAGTTCCAAGAGAAGCATGATAAAAATTCGATGG +
Preference number: 6 (lower is better)
Translates to: WKLMVSNTCSGA*SSKRSMIKIRW
Trigger: CCATCGAATTTTTATCATGCTTCTCTTGGAACTCAATGCACCTGAGCATGTGTTGGAAACCATTAATTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000568917.1
ENST00000569240.5
CDS CAA 90 bp AGGAGGTTTCCAGGTTTTAGCTCATTGATGTCTAATGCAAGGTTCTaGCAGAGAACCTCGATTTCAAACTTCAAGTTTAACTTTAAGTCA +
Preference number: 6 (lower is better)
Translates to: RRFPGFSSLMSNARF*QRTSISNFKFNFKS
Trigger: TGACTTAAAGTTAAACTTGAAGTTTGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAGACATCAATGAGCTAAAACCTGGAAACCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
CDS GCA 72 bp TCTCGTTCCCTCTTTATAGTAGAGTCTTTAAATCTCTaGAGCATTTCTAATACCTCATCAACAGACATGGTT +
Preference number: 6 (lower is better)
Translates to: SRSLFIVESLNL*SISNTSSTDMV
Trigger: AACCATGTCTGTTGATGAGGTATTAGAAATGCTGCAGAGATTTAAAGACTCTACTATAAAGAGGGAACGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000441024.6
ENST00000567188.5
ENST00000569240.5
ENST00000569732.1
CDS CCA 72 bp TATGTAACTCTTTATCAGGATACTCATCAACAGACATaGTTGGATGTGGTGGATGATTATATATTCGCTGGA +
Preference number: 6 (lower is better)
Translates to: YVTLYQDTHQQT*LDVVDDYIFAG
Trigger: TCCAGCGAATATATAATCATCCACCACATCCAACCATGTCTGTTGATGAGTATCCTGATAAAGAGTTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562046.1
CDS CAA 72 bp GTGAGTTCCACATTTCTAAGGAAAGGCGCTAAATATTaGAATAAATCAATCAGTAGCTGTGCATACATAGGC +
Preference number: 6 (lower is better)
Translates to: VSSTFLRKGAKY*NKSISSCAYIG
Trigger: GCCTATGTATGCACAGCTACTGATTGATTTATTCAAATATTTAGCGCCTTTCCTTAGAAATGTGGAACTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317147.10
ENST00000563130.5
ENST00000567188.5
ENST00000569240.5
ENST00000570139.1
CDS CAA 72 bp GTAACTCTTTATCAGGATACTCATCAACAGACATGGTaGGATGTGGTGGATGATTATATATTCGCTGGAAAT +
Preference number: 6 (lower is better)
Translates to: VTLYQDTHQQTW*DVVDDYIFAGN
Trigger: ATTTCCAGCGAATATATAATCATCCACCACATCCAACCATGTCTGTTGATGAGTATCCTGATAAAGAGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562046.1
CDS CAA 90 bp AATACACTTATCATAAATCTGAGCTACATCATCTGTTGCCCAAGCTaGCTGTTTTACAGAAGGAAACAACCAACAAGAGACAAAAGAATG +
Preference number: 6 (lower is better)
Translates to: NTLIINLSYIICCPS*LFYRRKQPTRDKRM
Trigger: CATTCTTTTGTCTCTTGTTGGTTGTTTCCTTCTGTAAAACAGCAAGCTTGGGCAACAGATGATGTAGCTCAGATTTATGATAAGTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563283.1