Pregenerated sensors for CNNM3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000273265Ensembl transcript IDs: ENST00000608609.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCTCTGCAGGGGACTCCCATGGTGCTGTACAGGTGCTGCAGGCTaGCTTGTGCGATTGAGTGTGCTGAGGCCAGGGGCTCCAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: QLCRGLPWCCTGAAG*LVRLSVLRPGAPSM Trigger: CATGCTTGGAGCCCCTGGCCTCAGCACACTCAATCGCACAAGCCAGCCTGCAGCACCTGTACAGCACCATGGGAGTCCCCTGCAGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS GCA 90 bp | CTCAAAGTTGCAGCTCTGCAGGGGACTCCCATGGTGCTGTACAGGTaGTGCAGGCTGGCTTGTGCGATTGAGTGTGCTGAGGCCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LKVAALQGTPMVLYR*CRLACAIECAEARG Trigger: GCCCCTGGCCTCAGCACACTCAATCGCACAAGCCAGCCTGCAGCACCTGTACAGCACCATGGGAGTCCCCTGCAGAGCTGCAACTTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS GCA 90 bp | CTATACCCACTCTCAAAGTTGCAGCTCTGCAGGGGACTCCCATGGTaGTGTACAGGTGCTGCAGGCTGGCTTGTGCGATTGAGTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LYPLSKLQLCRGLPW*CTGAAGWLVRLSVL Trigger: CAGCACACTCAATCGCACAAGCCAGCCTGCAGCACCTGTACAGCACCATGGGAGTCCCCTGCAGAGCTGCAACTTTGAGAGTGGGTATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS CCA 90 bp | TCACTATACCCACTCTCAAAGTTGCAGCTCTGCAGGGGACTCCCATaGTGCTGTACAGGTGCTGCAGGCTGGCTTGTGCGATTGAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: SLYPLSKLQLCRGLP*CCTGAAGWLVRLSV Trigger: CACACTCAATCGCACAAGCCAGCCTGCAGCACCTGTACAGCACCATGGGAGTCCCCTGCAGAGCTGCAACTTTGAGAGTGGGTATAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS GCA 90 bp | TCCCTTGAAGAACCTGAGTTACGTCACTATACCCACTCTCAAAGTTaGAGCTCTGCAGGGGACTCCCATGGTGCTGTACAGGTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SLEEPELRHYTHSQS*SSAGDSHGAVQVLQ Trigger: CTGCAGCACCTGTACAGCACCATGGGAGTCCCCTGCAGAGCTGCAACTTTGAGAGTGGGTATAGTGACGTAACTCAGGTTCTTCAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS CCA 72 bp | AGGGGACTCCCATGGTGCTGTACAGGTGCTGCAGGCTaGCTTGTGCGATTGAGTGTGCTGAGGCCAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RGLPWCCTGAAG*LVRLSVLRPGA Trigger: AGCCCCTGGCCTCAGCACACTCAATCGCACAAGCCAGCCTGCAGCACCTGTACAGCACCATGGGAGTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS GCA 72 bp | GCAGCTCTGCAGGGGACTCCCATGGTGCTGTACAGGTaGTGCAGGCTGGCTTGTGCGATTGAGTGTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AALQGTPMVLYR*CRLACAIECAE Trigger: CTCAGCACACTCAATCGCACAAGCCAGCCTGCAGCACCTGTACAGCACCATGGGAGTCCCCTGCAGAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS CAA 90 bp | GGACTCCCATGGTGCTGTACAGGTGCTGCAGGCTGGCTTGTGCGATaGAGTGTGCTGAGGCCAGGGGCTCCAAGCATGCAAAGTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: GLPWCCTGAAGWLVR*SVLRPGAPSMQSSM Trigger: CATTGAACTTTGCATGCTTGGAGCCCCTGGCCTCAGCACACTCAATCGCACAAGCCAGCCTGCAGCACCTGTACAGCACCATGGGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS GCA 72 bp | GTTACGTCACTATACCCACTCTCAAAGTTGCAGCTCTaGAGGGGACTCCCATGGTGCTGTACAGGTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VTSLYPLSKLQL*RGLPWCCTGAA Trigger: TGCAGCACCTGTACAGCACCATGGGAGTCCCCTGCAGAGCTGCAACTTTGAGAGTGGGTATAGTGACGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS GCA 72 bp | GAACCTGAGTTACGTCACTATACCCACTCTCAAAGTTaGAGCTCTGCAGGGGACTCCCATGGTGCTGTACAG | + |
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Preference number: 6 (lower is better) Translates to: EPELRHYTHSQS*SSAGDSHGAVQ Trigger: CTGTACAGCACCATGGGAGTCCCCTGCAGAGCTGCAACTTTGAGAGTGGGTATAGTGACGTAACTCAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS CAA 90 bp | TGCAGCTGCCTTTTCGTCCACACCTACAGGCTAGTGGTTTCAAAGTaGGAGTGTTCATCCCTTGAAGAACCTGAGTTACGTCACTATACC | + |
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Preference number: 6 (lower is better) Translates to: CSCLFVHTYRLVVSK*ECSSLEEPELRHYT Trigger: GGTATAGTGACGTAACTCAGGTTCTTCAAGGGATGAACACTCCAACTTTGAAACCACTAGCCTGTAGGTGTGGACGAAAAGGCAGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS CAA 72 bp | CTTTTCGTCCACACCTACAGGCTAGTGGTTTCAAAGTaGGAGTGTTCATCCCTTGAAGAACCTGAGTTACGT | + |
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Preference number: 6 (lower is better) Translates to: LFVHTYRLVVSK*ECSSLEEPELR Trigger: ACGTAACTCAGGTTCTTCAAGGGATGAACACTCCAACTTTGAAACCACTAGCCTGTAGGTGTGGACGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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| CDS CAA 72 bp | GACAAACTGGGGGCATGTTTTCCAAGTTTGATCCAATaGTTCTTCCACCTGAAGCTTTACTCCCAGAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: DKLGACFPSLIQ*FFHLKLYSQKV Trigger: AACTTTCTGGGAGTAAAGCTTCAGGTGGAAGAACAATTGGATCAAACTTGGAAAACATGCCCCCAGTTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608609.1 |
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