RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNNM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000168763

Ensembl transcript IDs: ENST00000305510.4, ENST00000377060.7, ENST00000465224.5, ENST00000480035.1, ENST00000494595.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACATCACGGCCACACAGCACCTGCAGGGAGGCTGTGGGGAGGTGTaGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGC +
Preference number: 1 (lower is better)
Translates to: HITATQHLQGGCGEV*SRCNRQLLSWGPHG
Trigger: GCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCCCCACAGCCTCCCTGCAGGTGCTGTGTGGCCGTGATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CCA 90 bp AGCCTCCAGGGAGGGAGCAGGGCTACAGGGACAGCCTACGGGCAGTaGAGCTTCTGGTTTGGCACATGGGAAAGGCTGGGGCGCATGCGC +
Preference number: 1 (lower is better)
Translates to: SLQGGSRATGTAYGQ*SFWFGTWERLGRMR
Trigger: GCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTGTCCCTGTAGCCCTGCTCCCTCCCTGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CCA 90 bp GGCTGTGGGGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTaGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATC +
Preference number: 1 (lower is better)
Translates to: GCGEVWSRCNRQLLS*GPHGGERIRCSMTI
Trigger: GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCCCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 90 bp TCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTaGCTCCTGTCTCCTAAAGGAGGGCAGGGCCGGCTGAAGGATCCA +
Preference number: 1 (lower is better)
Translates to: SFHSFLRRAWRAVPW*LLSPKGGQGRLKDP
Trigger: TGGATCCTTCAGCCGGCCCTGCCCTCCTTTAGGAGACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR GCA 90 bp GGCTCAGCCCAAAGAGGTCTGAATCTGAATATGCCGCACTGTCCCTaGCCCGGGGGAGAAGGGGAAGGCTGGGCCCTGGGAACTAGAGAT +
Preference number: 1 (lower is better)
Translates to: GSAQRGLNLNMPHCP*PGGEGEGWALGTRD
Trigger: ATCTCTAGTTCCCAGGGCCCAGCCTTCCCCTTCTCCCCCGGGGCAGGGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGCTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CCA 90 bp GAGCAGGGCTACAGGGACAGCCTACGGGCAGTGGAGCTTCTGGTTTaGCACATGGGAAAGGCTGGGGCGCATGCGCTGAAACATGACACC +
Preference number: 1 (lower is better)
Translates to: EQGYRDSLRAVELLV*HMGKAGAHALKHDT
Trigger: GGTGTCATGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTGTCCCTGTAGCCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 90 bp TACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATaGCGATCCCTTCCTCCCAGGCATGACCTCTTCTCAGAACACGGG +
Preference number: 1 (lower is better)
Translates to: YSPGGHTAERGFDAA*RSLPPRHDLFSEHG
Trigger: CCCGTGTTCTGAGAAGAGGTCATGCCTGGGAGGAAGGGATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 90 bp CTGTGCCCTGGTGACTCCTGTCTCCTAAAGGAGGGCAGGGCCGGCTaGAGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGAC +
Preference number: 1 (lower is better)
Translates to: LCPGDSCLLKEGRAG*RIQALMSSSEDTQD
Trigger: GTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCTTCAGCCGGCCCTGCCCTCCTTTAGGAGACAGGAGTCACCAGGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 90 bp TGGGCCCTGGGAACTAGAGATGATGGCATTCCTTTCATTCCTTCCTaGGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCTCCTA +
Preference number: 1 (lower is better)
Translates to: WALGTRDDGIPFIPS*GGPGGLCPGDSCLL
Trigger: TAGGAGACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTCTAGTTCCCAGGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 90 bp CGATCCCTTCCTCCCAGGCATGACCTCTTCTCAGAACACGGGAACTaGCAACACTGCGAGTGGCAACTCAGCAGGTGGGCAGAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: RSLPPRHDLFSEHGN*QHCEWQLSRWAEKQ
Trigger: CTGCTTCTCTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGAAGAGGTCATGCCTGGGAGGAAGGGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 90 bp GGAGAGAGGATTCGATGCAGCATGACGATCCCTTCCTCCCAGGCATaGCCTCTTCTCAGAACACGGGAACTGACAACACTGCGAGTGGCA +
Preference number: 1 (lower is better)
Translates to: GERIRCSMTIPSSQA*PLLRTRELTTLRVA
Trigger: TGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGAAGAGGTCATGCCTGGGAGGAAGGGATCGTCATGCTGCATCGAATCCTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 90 bp TCTGGTTTGGCACATGGGAAAGGCTGGGGCGCATGCGCTGAAACATaGCACCATCAGGGAAGCCAGAAAGGACAACATGGACAAGGCCAT +
Preference number: 1 (lower is better)
Translates to: SGLAHGKGWGACAET*HHQGSQKGQHGQGH
Trigger: ATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCCTGATGGTGTCATGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 90 bp TGGAGCTTCTGGTTTGGCACATGGGAAAGGCTGGGGCGCATGCGCTaGAACATGACACCATCAGGGAAGCCAGAAAGGACAACATGGACA +
Preference number: 1 (lower is better)
Translates to: WSFWFGTWERLGRMR*NMTPSGKPERTTWT
Trigger: TGTCCATGTTGTCCTTTCTGGCTTCCCTGATGGTGTCATGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CCA 90 bp AATAGAGGTCACGGCCACACAAAGGCAGTAACTGCACTCACAAGGTaGCTCAGCCCAAAGAGGTCTGAATCTGAATATGCCGCACTGTCC +
Preference number: 1 (lower is better)
Translates to: NRGHGHTKAVTALTR*LSPKRSESEYAALS
Trigger: GGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGTTACTGCCTTTGTGTGGCCGTGACCTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR GCA 90 bp GTGGGGAGGGAGATCCTTGTGGGGATGGGACTTCTTTATCCTGATTaGAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGAC +
Preference number: 1 (lower is better)
Translates to: VGREILVGMGLLYPD*SGSYTDVHVTNDLD
Trigger: GTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATCAGGATAAAGAAGTCCCATCCCCACAAGGATCTCCCTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR TCA 90 bp TGTACCAAGGTTATATGTAAGCTGTTAACATTAGGGGAACCTGGGTaGAAGGTGTATGAAACTTCTGTGAATCTGGGCACGGTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: CTKVICKLLTLGEPG*KVYETSVNLGTVAH
Trigger: GTGAGCCACCGTGCCCAGATTCACAGAAGTTTCATACACCTTTCACCCAGGTTCCCCTAATGTTAACAGCTTACATATAACCTTGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR TCA 90 bp AATCCCGAATGCTTACACACTATGCTCCCATTTATACAACATTCTTaGAATGACAAAATAAGAAGAGATGAACGATTAGTGGTTACCAGG +
Preference number: 1 (lower is better)
Translates to: NPECLHTMLPFIQHS*NDKIRRDERLVVTR
Trigger: CCTGGTAACCACTAATCGTTCATCTCTTCTTATTTTGTCATTTCAAGAATGTTGTATAAATGGGAGCATAGTGTGTAAGCATTCGGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR GCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCATGCCGCACTGTCCCTaGCCCGGGGGAGAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCMPHCP*PGGEGE
Trigger: TTCCCCTTCTCCCCCGGGGCAGGGACAGTGCGGCAT...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR GCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCCTCCAGCTCCCCACGTaGTCATCTGTTCCCCAGATC +
Preference number: 2 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVLQLPT*SSVPQI
Trigger: GATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAG...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCGCACATGGGAAAGGCTaGGGCGCATGCGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCAHGKG*GACAET
Trigger: TGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGC...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp GTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGAACCCCCAGCCAAAATaGGTGCTCTCGGCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: VQQAATLLGATRRREDSMNPQPK*VLSACS
Trigger: TGAGCAAGCCGAGAGCACCCATTTTGGCTGGGGGTT...CATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR TCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCGCATGCGCTGAAACATaGCACCATCAGGGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: LLSWGPHGGERIRCSMTIACAET*HHQGSQ
Trigger: CTGGCTTCCCTGATGGTGTCATGTTTCAGCGCATGC...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCGTGGAGCTTCTGGTTTaGCACATGGGAAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LLSWGPHGGERIRCSMTIVELLV*HMGKAG
Trigger: CCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCAC...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR GCA 90 bp TCTCAGAACACGGGAACTGACAACACTGCGAGTGGCAACTCAGCAGGTGGGCAGCGGGCACAAAACTTCTaGTCAGCTCACTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SQNTGTDNTASGNSAGGQRAQNF*SAHSSS
Trigger: GGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCG...CTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR TCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCGGATTCGATGCAGCATaGCGATCCCTTCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: SSSLPTQSMILCPCDARFGFDAA*RSLPPR
Trigger: CCTGGGAGGAAGGGATCGTCATGCTGCATCGAATCC...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR GCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCGAGGTGTGGAGCAGGTaGAACAGGCAGCTACTCTCC +
Preference number: 2 (lower is better)
Translates to: SSSLPTQSMILCPCDARFEVWSR*NRQLLS
Trigger: GGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTC...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR TCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTGAGGGCAGGGCCGGCTaGAGGATCCAGGCATTGATG +
Preference number: 2 (lower is better)
Translates to: WREDFKASVSNPGLLSEFEGRAG*RIQALM
Trigger: CATCAATGCCTGGATCCTTCAGCCGGCCCTGCCCTC...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGACTGCACTCACAAGGTaGCTCAGCCCAAAGAGGTCT +
Preference number: 2 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWTALTR*LSPKRS
Trigger: AGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGT...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCGTGGAGCTTCTGGTTTaGCACATGGGAAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SSSLPTQSMILCPCDARFVELLV*HMGKAG
Trigger: CCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCAC...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp TGTCCACCCACATCGCACCAGTGTCAGAGTCTTTGTTGGAATACTGCATTACAAGCTGAGGTGGCAGGATaGCCTGAACCAGGGAGGTCG +
Preference number: 2 (lower is better)
Translates to: CPPTSHQCQSLCWNTALQAEVAG*PEPGRS
Trigger: CGACCTCCCTGGTTCAGGCCATCCTGCCACCTCAGC...TTGTAATGCAGTATTCCAACAAAGACTCTGACACTGGTGCGATGTGGGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR GCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCCTCCAGCTCCCCACGTaGTCATCTGTTCCCCAGATC +
Preference number: 2 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTALQLPT*SSVPQI
Trigger: GATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAG...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR GCA 90 bp AAAGTGCTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCATGCCGCACTGTCCCTaGCCCGGGGGAGAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: KVLPAAIGWQIKSKQIEVMPHCP*PGGEGE
Trigger: TTCCCCTTCTCCCCCGGGGCAGGGACAGTGCGGCAT...GACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR TCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGGAAGGATCCAGGCATTaGTGTCTAGTTCTGAGGACA +
Preference number: 2 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWEGSRH*CLVLRT
Trigger: TGTCCTCAGAACTAGACATCAATGCCTGGATCCTTC...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR TCA 90 bp CTGCATTACAACCATATAAGATGTAACCATGGAGGGAAACTAGATGAAGGGTGCGAGGGCAGGGCCGGCTaGAGGATCCAGGCATTGATG +
Preference number: 2 (lower is better)
Translates to: LHYNHIRCNHGGKLDEGCEGRAG*RIQALM
Trigger: CATCAATGCCTGGATCCTTCAGCCGGCCCTGCCCTC...GCACCCTTCATCTAGTTTCCCTCCATGGTTACATCTTATATGGTTGTAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR TCA 90 bp TGTCCACCCACATCGCACCAGTGTCAGAGTCTTTGTTGGAATACTGCATTACAAAGGGCTGTGCCCTGGTaGCTCCTGTCTCCTAAAGGA +
Preference number: 2 (lower is better)
Translates to: CPPTSHQCQSLCWNTALQRAVPW*LLSPKG
Trigger: TCCTTTAGGAGACAGGAGTCACCAGGGCACAGCCCT...TTGTAATGCAGTATTCCAACAAAGACTCTGACACTGGTGCGATGTGGGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR GCA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCAGGGCCTGGAGGGCTGTaGCCTGGTGACTCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPGPGGL*PGDSCL
Trigger: GAGACAGGAGTCACCAGGGCACAGCCCTCCAGGCCC...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR GCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCCACAAAGGCAGTAACTaGACTCACAAGGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: SSSLPTQSMILCPCDARFHKGSN*THKVAQ
Trigger: CTGAGCCACCTTGTGAGTGCAGTTACTGCCTTTGTG...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR GCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTTCCCTCACTGCTCTCTaGACATCACGGCCACACAGC +
Preference number: 2 (lower is better)
Translates to: WREDFKASVSNPGLLSEFSLTAL*TSRPHS
Trigger: GCTGTGTGGCCGTGATGTGCAGAGAGCAGTGAGGGA...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTGCACATGGGAAAGGCTaGGGCGCATGCGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: WREDFKASVSNPGLLSEFAHGKG*GACAET
Trigger: TGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGC...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR TCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTGCATGCGCTGAAACATaGCACCATCAGGGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: WREDFKASVSNPGLLSEFACAET*HHQGSQ
Trigger: CTGGCTTCCCTGATGGTGTCATGTTTCAGCGCATGC...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR GCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTCGGGCACAAAACTTCTaGTCAGCTCACTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: WREDFKASVSNPGLLSEFRAQNF*SAHSSS
Trigger: GGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCG...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp GCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCACACAAGGGAAGGCTGGGCCCTaGGAACTAGAGATGATGGCA +
Preference number: 2 (lower is better)
Translates to: AAIGWQIKSKQIEVTATQGKAGP*ELEMMA
Trigger: TGCCATCATCTCTAGTTCCCAGGGCCCAGCCTTCCC...TTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTACAGCCTACGGGCAGTaGAGCTTCTGGTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: WREDFKASVSNPGLLSEFTAYGQ*SFWFGT
Trigger: TGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTGT...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCAGGCTGTGGGGAGGTGTaGAGCAGGTGCAACAGGCAG +
Preference number: 2 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPGCGEV*SRCNRQ
Trigger: CTGCCTGTTGCACCTGCTCCACACCTCCCCACAGCC...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR TCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGACAAGGCCATCGATCTaGACCCCCAGCCAAAATGGG +
Preference number: 2 (lower is better)
Translates to: CFQPGLALRVYSLRTISKTRPSI*TPSQNG
Trigger: CCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGT...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR GCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCCACAAAGGCAGTAACTaGACTCACAAGGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTAHKGSN*THKVAQ
Trigger: CTGAGCCACCTTGTGAGTGCAGTTACTGCCTTTGTG...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR TCA 90 bp AGGGTGCGTGGGGCCCTTACCTTTACAACTTCCTATCATCTGAAATTATTTCAAGACAGGAGAATGGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RVRGALTFTTSYHLKLFQDRRMA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCCATTCTCCTGTC...TTGAAATAATTTCAGATGATAGGAAGTTGTAAAGGTAAGGGCCCCACGCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR CCA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCAGGGAAGGCTGGGCCCTaGGAACTAGAGATGATGGCA +
Preference number: 2 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPGKAGP*ELEMMA
Trigger: TGCCATCATCTCTAGTTCCCAGGGCCCAGCCTTCCC...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR CCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGACTGCACTCACAAGGTaGCTCAGCCCAAAGAGGTCT +
Preference number: 2 (lower is better)
Translates to: CFQPGLALRVYSLRTISKTALTR*LSPKRS
Trigger: AGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGT...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR TCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTGAAGGATCCAGGCATTaGTGTCTAGTTCTGAGGACA +
Preference number: 2 (lower is better)
Translates to: WREDFKASVSNPGLLSEFEGSRH*CLVLRT
Trigger: TGTCCTCAGAACTAGACATCAATGCCTGGATCCTTC...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CCA 90 bp GCTCTAAGTGCAGTATGGCATCCTGGATTGGCTGCTGCAGCAGAAAAGGGACATCCAGCAGCGATAGGTTaGCAAATTAAAAGCAAACAA +
Preference number: 2 (lower is better)
Translates to: ALSAVWHPGLAAAAEKGHPAAIG*QIKSKQ
Trigger: TTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGG...ATGTCCCTTTTCTGCTGCAGCAGCCAATCCAGGATGCCATACTGCACTTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR TCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGCCGTTTCCACACAGCTaGAGAACTACGGAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: CFQPGLALRVYSLRTISKPFPHS*RTTEGK
Trigger: TTTTCCTTCCGTAGTTCTTCAGCTGTGTGGAAACGG...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CAA 90 bp CTGATTAAATCACAAGCTCTGGTGGCAGGTCCACGTATTTTTAATTaGCCAGGTGATTCTGGTGTGCAGCCAAGGTTAAGAATCCCTGAT +
Preference number: 2 (lower is better)
Translates to: LIKSQALVAGPRIFN*PGDSGVQPRLRIPD
Trigger: ATCAGGGATTCTTAACCTTGGCTGCACACCAGAATCACCTGGCAAATTAAAAATACGTGGACCTGCCACCAGAGCTTGTGATTTAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR CCA 90 bp TGTCCACCCACATCGCACCAGTGTCAGAGTCTTTGTTGGAATACTGCATTACAAAATCACAAGCTCTGGTaGCAGGTCCACGTATTTTTA +
Preference number: 2 (lower is better)
Translates to: CPPTSHQCQSLCWNTALQNHKLW*QVHVFL
Trigger: TAAAAATACGTGGACCTGCCACCAGAGCTTGTGATT...TTGTAATGCAGTATTCCAACAAAGACTCTGACACTGGTGCGATGTGGGTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR TCA 90 bp AGGGTGCGTGGGGCCCTTACCTTTACAACTTCCTATCATCTGAAATTATTTCAATGGGTGAAAGGTGTATaGAACTTCTGTGAATCTGGG +
Preference number: 2 (lower is better)
Translates to: RVRGALTFTTSYHLKLFQWVKGV*NFCESG
Trigger: CCCAGATTCACAGAAGTTTCATACACCTTTCACCCA...TTGAAATAATTTCAGATGATAGGAAGTTGTAAAGGTAAGGGCCCCACGCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR TCA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCATCCCTACCCAATCTATaGTCCTATGTCCTTGTGATG +
Preference number: 2 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPSLPNL*SYVLVM
Trigger: CATCACAAGGACATAGGATCATAGATTGGGTAGGGA...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR CCA 72 bp AGGGCTACAGGGACAGCCTACGGGCAGTGGAGCTTCTaGTTTGGCACATGGGAAAGGCTGGGGCGCATGCGC +
Preference number: 3 (lower is better)
Translates to: RATGTAYGQWSF*FGTWERLGRMR
Trigger: GCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTGTCCCTGTAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CCA 72 bp GAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTaGGGGCCACACGGCGGAGAGAGGATTCGATGCAGC +
Preference number: 3 (lower is better)
Translates to: EVWSRCNRQLLS*GPHGGERIRCS
Trigger: GCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CAA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGATGGGTGCTCTCGGCTaGCTCAAAAAGTGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: GGVEQVQQAATLLGATRRMGALG*LKKCCQ
Trigger: CTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCAT...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CCA 72 bp TACAGGGACAGCCTACGGGCAGTGGAGCTTCTGGTTTaGCACATGGGAAAGGCTGGGGCGCATGCGCTGAAA +
Preference number: 3 (lower is better)
Translates to: YRDSLRAVELLV*HMGKAGAHALK
Trigger: TTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTGTCCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 72 bp CCTCCCAGGCATGACCTCTTCTCAGAACACGGGAACTaGCAACACTGCGAGTGGCAACTCAGCAGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: PPRHDLFSEHGN*QHCEWQLSRWA
Trigger: TGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGAAGAGGTCATGCCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 72 bp TGGTTTGGCACATGGGAAAGGCTGGGGCGCATGCGCTaGAACATGACACCATCAGGGAAGCCAGAAAGGACA +
Preference number: 3 (lower is better)
Translates to: WFGTWERLGRMR*NMTPSGKPERT
Trigger: TGTCCTTTCTGGCTTCCCTGATGGTGTCATGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR TCA 72 bp AAGCCAGAAAGGACAACATGGACAAGGCCATCGATCTaGACCCCCAGCCAAAATGGGTGCTCTCGGCTTGCT +
Preference number: 3 (lower is better)
Translates to: KPERTTWTRPSI*TPSQNGCSRLA
Trigger: AGCAAGCCGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR-3UTR CAA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTAGTGGAGCTTCTGGTTaGGCACATGGGAAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: WREDFKASVSNPGLLSEFSGASG*AHGKGW
Trigger: CCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACT...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CCA 72 bp ATAGTCGTAGCAGCTTTATTTGGAATAGCCCCAAACTaGAAACATCCCAGGTGTCCTTCAGGGGGCCAATGC +
Preference number: 3 (lower is better)
Translates to: IVVAALFGIAPN*KHPRCPSGGQC
Trigger: GCATTGGCCCCCTGAAGGACACCTGGGATGTTTCCAGTTTGGGGCTATTCCAAATAAAGCTGCTACGACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR CCA 72 bp AAAGAAAGCAACAGCTCTAAGTGCAGTATGGCATCCTaGATTGGCTGCTGCAGCAGAAAAGGGACATTGGGA +
Preference number: 3 (lower is better)
Translates to: KESNSSKCSMAS*IGCCSRKGTLG
Trigger: TCCCAATGTCCCTTTTCTGCTGCAGCAGCCAATCCAGGATGCCATACTGCACTTAGAGCTGTTGCTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR CAA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCAAGTGGAGCTTCTGGTTaGGCACATGGGAAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPSGASG*AHGKGW
Trigger: CCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACT...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR GCA 72 bp AACAGCTCTAAGTGCAGTATGGCATCCTGGATTGGCTaGTGCAGCAGAAAAGGGACATTGGGAAAAATGGTA +
Preference number: 3 (lower is better)
Translates to: NSSKCSMASWIG*CSRKGTLGKMV
Trigger: TACCATTTTTCCCAATGTCCCTTTTCTGCTGCAGCAGCCAATCCAGGATGCCATACTGCACTTAGAGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR TCA 72 bp ATCCTGATTGCAGTGGTAGTTACACAGATGTACATGTaGCAAATGATTTGGACTGTCCACCCACATCGCACC +
Preference number: 3 (lower is better)
Translates to: ILIAVVVTQMYM*QMIWTVHPHRT
Trigger: GGTGCGATGTGGGTGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR GCA 72 bp ATAAGATGTAACCATGGAGGGAAACTAGATGAAGGGTaGGTGGGGCCCTTACCTTTACAACTTCCTATCATC +
Preference number: 3 (lower is better)
Translates to: IRCNHGGKLDEG*VGPLPLQLPII
Trigger: GATGATAGGAAGTTGTAAAGGTAAGGGCCCCACGCACCCTTCATCTAGTTTCCCTCCATGGTTACATCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR-3UTR CAA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCAGTTTCCAACCCGGGCTaGCTCTCAGAGTTTATTCCT +
Preference number: 3 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPVSNPG*LSEFIP
Trigger: AGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAAC...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR TCA 72 bp GTTATATGTAAGCTGTTAACATTAGGGGAACCTGGGTaGAAGGTGTATGAAACTTCTGTGAATCTGGGCACG +
Preference number: 3 (lower is better)
Translates to: VICKLLTLGEPG*KVYETSVNLGT
Trigger: CGTGCCCAGATTCACAGAAGTTTCATACACCTTTCACCCAGGTTCCCCTAATGTTAACAGCTTACATATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
3UTR GCA 72 bp GAGATCCTTGTGGGGATGGGACTTCTTTATCCTGATTaGAGTGGTAGTTACACAGATGTACATGTGACAAAT +
Preference number: 3 (lower is better)
Translates to: EILVGMGLLYPD*SGSYTDVHVTN
Trigger: ATTTGTCACATGTACATCTGTGTAACTACCACTGCAATCAGGATAAAGAAGTCCCATCCCCACAAGGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGCGGGCCTGCTGTGGCTaGACCCTGCCGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGVEQVQQAATLLGATRRRACCG*TLPLWW
Trigger: CCACCACAGCGGCAGGGTCCAGCCACAGCAGGCCCG...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACACGAGCCCCGCGCTaGCCAACACGGCGGGCACCG +
Preference number: 4 (lower is better)
Translates to: RQLLSWGPHGGERIRCSMTRAPR*PTRRAP
Trigger: CGGTGCCCGCCGTGTTGGGCAGCGCGGGGCTCGTGT...CATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCGCCAGCTCCAGCAGCTaGCCCACGGGCAGCGCGACG +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVASSSS*PTGSAT
Trigger: CGTCGCGCTGCCCGTGGGGCAGCTGCTGGAGCTGGC...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGGGTTCCGCCCAGGGCTaGCTTCCACCGGGACGCCGG +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGGSAQG*LPPGRR
Trigger: CCGGCGTCCCGGTGGAAGGCAGCCCTGGGCGGAACC...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGATGCCGCACTGTCCCTaGCCCGGGGGAGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GGVEQVQQAATLLGATRRMPHCP*PGGEGE
Trigger: TTCCCCTTCTCCCCCGGGGCAGGGACAGTGCGGCAT...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCGCCGCCGCCATCGCCTaGTGCCCCCTCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVAAAIA*CPLSAS
Trigger: AGAGGCCGAGAGGGGGCAGCAGGCGATGGCGGCGGC...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377060.7
CDS-3UTR CCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGGGCGCAGGAGGAAGGTaGCGTCCGGCGTGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGGAGGR*RPACPA
Trigger: CGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCC...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCGGCGCAGGAGGAAGGTaGCGTCCGGCGTGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCGAGGR*RPACPA
Trigger: CGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCC...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCGCGCGACGGGCAGAGTaGGCAGGACGGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCAARRAE*AGRPGG
Trigger: GCCGCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGC...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGGAGGGCAGGGCCGGCTaGAGGATCCAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: GGVEQVQQAATLLGATRREGRAG*RIQALM
Trigger: CATCAATGCCTGGATCCTTCAGCCGGCCCTGCCCTC...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCCTCTCGCGCAGCACCTaGACCTCGGCAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCLSRST*TSAGAS
Trigger: GCTGGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAG...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GGCAGGCGGGCACAAAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATGCCAGCTCCAGCAGCTaGCCCACGGGCAGCGCGACG +
Preference number: 4 (lower is better)
Translates to: GRRAQNFCSAHSSSPRAHASSSS*PTGSAT
Trigger: CGTCGCGCTGCCCGTGGGGCAGCTGCTGGAGCTGGC...ATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GGCAGGCGGGCACAAAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATGCCGCCATCGCCTGCTaGCCCCTCTCGGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GRRAQNFCSAHSSSPRAHAAIAC*PLSASR
Trigger: GCGAGAGGCCGAGAGGGGGCAGCAGGCGATGGCGGC...ATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377060.7
CDS-3UTR CCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGCGGGCCTGCTGTGGCTaGACCCTGCCGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGRACCG*TLPLWW
Trigger: CCACCACAGCGGCAGGGTCCAGCCACAGCAGGCCCG...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCACGCCGGGCCTGCTGTaGCTGGACCCTGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVTPGLL*LDPAAV
Trigger: CACAGCGGCAGGGTCCAGCCACAGCAGGCCCGGCGT...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGCCAGCGCGCTCAGCTaGAGGCCTCGCGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDASALS*RPRASA
Trigger: AGCGCTGGCGCGAGGCCTGCAGCTGAGCGCGCTGGC...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGGCAGCACGCCCTTGCTaGGATCGCTGTAGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VQQAATLLGATRRREDSMAARPC*DRCRGR
Trigger: GCGACCCCTACAGCGATCTCAGCAAGGGCGTGCTGC...CATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGAGTCTTCGAGGGGCGTaGGCACGTCCTCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGSLRGA*ARPPRS
Trigger: GGACCGTGGAGGACGTGCTCACGCCCCTCGAAGACT...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCTGTGGCCGCTCTGCATaGTGCTGGCCAGGACGCCGA +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCCGRSA*CWPGRR
Trigger: TCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACA...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGATGCGCAGCGGGCTaGATACATCCACTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GGVEQVQQAATLLGATRRRCAAG*IHPLLG
Trigger: CCCGAGAAGTGGATGTATTCAGCCCGCTGCGCATCT...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCGGTGGCAGGATGGCCTaGACCAGGGAGGTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCGGRMA*TREVEA
Trigger: AGCCTCGACCTCCCTGGTTCAGGCCATCCTGCCACC...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCCCTCGTACACCGGGATaGGCGTGTGGCCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCPRTPG*ACGRSA
Trigger: TGCAGAGCGGCCACACGCGCATCCCGGTGTACGAGG...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp AGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGGCAGGTCATGGCGGATaGGCTGGAGCGAGGACACCG +
Preference number: 4 (lower is better)
Translates to: RQLLSWGPHGGERIRCSMAGHGG*AGARTP
Trigger: CGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGC...CATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCACGCCGGGCCTGCTGTaGCTGGACCCTGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCATPGLL*LDPAAV
Trigger: CACAGCGGCAGGGTCCAGCCACAGCAGGCCCGGCGT...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp AGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGTGCTGGCGTCCAGCATaGAGCAGTCTTCGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: RQLLSWGPHGGERIRCSMCWRPA*SSLRGA
Trigger: CGCCCCTCGAAGACTGCTTCATGCTGGACGCCAGCA...CATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GGCAGGCGGGCACAAAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATGGGCCTGGAGGGCTGTaGCCTGGTGACTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GRRAQNFCSAHSSSPRAHGPGGL*PGDSCL
Trigger: GAGACAGGAGTCACCAGGGCACAGCCCTCCAGGCCC...ATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCATGCGTGCCGTCACCTaGGTCGGGCTGCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCMRAVT*VGLQVM
Trigger: CATGACCTGCAGCCCGACCCAGGTGACGGCACGCAT...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCATGCGTGCCGTCACCTaGGTCGGGCTGCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVMRAVT*VGLQVM
Trigger: CATGACCTGCAGCCCGACCCAGGTGACGGCACGCAT...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGTTCTGGTTTGGCACATaGGAAAGGCTGGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: GGVEQVQQAATLLGATRRFWFGT*ERLGRM
Trigger: CATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAA...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp AGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGGGCTGTGGGGAGGTGTaGAGCAGGTGCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQLLSWGPHGGERIRCSMGCGEV*SRCNRQ
Trigger: CTGCCTGTTGCACCTGCTCCACACCTCCCCACAGCC...CATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCGCTGAGGTGGCAGGATaGCCTGAACCAGGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVAEVAG*PEPGRS
Trigger: CGACCTCCCTGGTTCAGGCCATCCTGCCACCTCAGC...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp CATCAGGGAAGCCAGAAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAGCGCGCTCAGCTaGAGGCCTCGCGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: HQGSQKGQHGQGHRSEPPASALS*RPRASA
Trigger: AGCGCTGGCGCGAGGCCTGCAGCTGAGCGCGCTGGC...TGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCCTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGCTCTCGCGCAGCACCTaGACCTCGGCAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSLSRST*TSAGAS
Trigger: GCTGGCGCCTGCCGAGGTGCAGGTGCTGCGCGAGAG...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGGGATGCTTCAACAGGTaGAGCAGGACCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GGVEQVQQAATLLGATRRGCFNR*SRTFSE
Trigger: CTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCC...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGTGGTTGACACTGGGATaGTTCAACAGGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGVEQVQQAATLLGATRRWLTLG*FNRCSR
Trigger: CCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCA...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCTCACCTGGGTCGGGCTaGAGGTCATGGCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCASPGSG*RSWRMG
Trigger: GCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGA...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GGAGGTGTGGAGCAGGTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGGGAGAGAGGATTCGATaGAGCATGACGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GGVEQVQQAATLLGATRRGERIR*SMTIPS
Trigger: GGAAGGGATCGTCATGCTGCATCGAATCCTCTCTCC...CCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGAGATGCGCAGCGGGCTaGATACATCCACTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGRCAAG*IHPLLG
Trigger: CCCGAGAAGTGGATGTATTCAGCCCGCTGCGCATCT...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCGGGACAATACGCAGATaGATGCGTGCCGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVGTIRR*MRAVTW
Trigger: CCAGGTGACGGCACGCATTCATCTGCGTATTGTCCC...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGAGGGCTGTGCCCTGGTaGCTCCTGTCTCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: VQQAATLLGATRRREDSMRAVPW*LLSPKG
Trigger: TCCTTTAGGAGACAGGAGTCACCAGGGCACAGCCCT...CATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGGGATTCGATGCAGCATaGCGATCCCTTCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VQQAATLLGATRRREDSMGFDAA*RSLPPR
Trigger: CCTGGGAGGAAGGGATCGTCATGCTGCATCGAATCC...CATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TCTCAGAACACGGGAACTGACAACACTGCGAGTGGCAACTCAGCAGGTGGGCAGCGCGTGTGGCCGCTCTaGATGATGCTGGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: SQNTGTDNTASGNSAGGQRVWPL*MMLART
Trigger: CGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCG...CTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCGGTTCCGCCCAGGGCTaGCTTCCACCGGGACGCCGG +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFGSAQG*LPPGRR
Trigger: CCGGCGTCCCGGTGGAAGGCAGCCCTGGGCGGAACC...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGCTCCAGCTCCCCACGTaGTCATCTGTTCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGLQLPT*SSVPQI
Trigger: GATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAG...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGGAGGTGTGGAGCAGGTaGAACAGGCAGCTACTCTCC +
Preference number: 4 (lower is better)
Translates to: RQLLSWGPHGGERIRCSMEVWSR*NRQLLS
Trigger: GGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTC...CATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCAGGACCAAGAGCTGTTaGCGAAGCCCGGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LLSWGPHGGERIRCSMTIRTKSC*RSPGRR
Trigger: TCTTCGGCCCGGGCTTCGCCAACAGCTCTTGGTCCT...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGACAGGTAGTGGTGTGTaGCCAGCCGGTTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: VQQAATLLGATRRREDSMTGSGV*PAGCSR
Trigger: ACGAGAGCAACCGGCTGGCCACACACCACTACCTGT...CATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GGCAGGCGGGCACAAAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATGACTGTGGCAGGTTCTaGGCTCGGGTAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GRRAQNFCSAHSSSPRAHDCGRF*ARVARS
Trigger: ACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTC...ATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCACCCTGCCGCTGTGGTaGTCTTCTCACCAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLSWGPHGGERIRCSMTITLPLW*SSHQGA
Trigger: GGCTCCTTGGTGAGAAGACCACCACAGCGGCAGGGT...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGTGGACCCTGCCGCTGTaGTGGTCTTCTCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: VQQAATLLGATRRREDSMWTLPL*WSSHQG
Trigger: TCCTTGGTGAGAAGACCACCACAGCGGCAGGGTCCA...CATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCTCTGTTCCCCAGATCTaGGGCTGCCTAGTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVSVPQI*GCLVSR
Trigger: ACGGCTCACTAGGCAGCCCCAGATCTGGGGAACAGA...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TCTCAGAACACGGGAACTGACAACACTGCGAGTGGCAACTCAGCAGGTGGGCAGAGGCAGCTACTCTCCTaGGGGCCACACGGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQNTGTDNTASGNSAGGQRQLLS*GPHGGE
Trigger: CTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT...CTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CAA 72 bp CTACAGGGACAGCCTACGGGCAGTGGAGCTTCTGGTTaGGCACATGGGAAAGGCTGGGGCGCATGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LQGQPTGSGASG*AHGKGWGACAE
Trigger: TTCAGCGCATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTGTCCCTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGGGCGCATGCGCTaGAACATGACACCATCAGGG +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCALGRMR*NMTPSG
Trigger: CCCTGATGGTGTCATGTTTCAGCGCATGCGCCCCAG...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCCTGCCTGGAATAACCTaGAGGTCGGTGTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVLPGIT*RSVFSG
Trigger: CCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAG...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATCTGTTCCCCAGATCGGGCCTGGAGGGCTGTaGCCTGGTGACTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KLLLSSLQLPTCSSVPQIGPGGL*PGDSCL
Trigger: GAGACAGGAGTCACCAGGGCACAGCCCTCCAGGCCC...GATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCTCCCTCACTGCTCTCTaGACATCACGGCCACACAGC +
Preference number: 4 (lower is better)
Translates to: LLSWGPHGGERIRCSMTISLTAL*TSRPHS
Trigger: GCTGTGTGGCCGTGATGTGCAGAGAGCAGTGAGGGA...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGTCATGGCGGATGGGCTaGAGCGAGGACACCGGGGAC +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSSWRMG*SEDTGD
Trigger: GTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGA...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GCCCAAAGAGGTCTGAATCTGAATATGCCGCACTGTCCCTGCCCCGGGGGAGAAGTTCTCAGGGGACTGTaGCAGGTTCTGGGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: AQRGLNLNMPHCPCPGGEVLRGL*QVLGSG
Trigger: ACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAAC...TTCTCCCCCGGGGCAGGGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GGCAGGCGGGCACAAAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATCCTGGTCTGGCTGCCTaGAATAACCTGCAGGTCGGT +
Preference number: 4 (lower is better)
Translates to: GRRAQNFCSAHSSSPRAHPGLAA*NNLQVG
Trigger: ACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGG...ATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CCAGGAGTTAGGGAAGGTGGGGAGGGAGATCCTTGTGGGGATGGGACTTCTTTATGCTGGCGTCCAGCATaGAGCAGTCTTCGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: PGVREGGEGDPCGDGTSLCWRPA*SSLRGA
Trigger: CGCCCCTCGAAGACTGCTTCATGCTGGACGCCAGCA...TAAAGAAGTCCCATCCCCACAAGGATCTCCCTCCCCACCTTCCCTAACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGTCAGAACACGGGAACTaGCAACACTGCGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGSEHGN*QHCEWQ
Trigger: TTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGA...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCGTGTGGCCAGCCGGTTaGTCTCGTCAAACCTCACTT +
Preference number: 4 (lower is better)
Translates to: LLSWGPHGGERIRCSMTIVWPAG*SRQTSL
Trigger: AAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACAC...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCTCCCTCACTGCTCTCTaGACATCACGGCCACACAGC +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCASLTAL*TSRPHS
Trigger: GCTGTGTGGCCGTGATGTGCAGAGAGCAGTGAGGGA...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGGCAGGTCATGGCGGATaGGCTGGAGCGAGGACACCG +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWAGHGG*AGARTP
Trigger: CGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGC...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATCCTGGTCTGGCTGCCTaGAATAACCTGCAGGTCGGT +
Preference number: 4 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDPGLAA*NNLQVG
Trigger: ACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGG...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GCCCAAAGAGGTCTGAATCTGAATATGCCGCACTGTCCCTGCCCCGGGGGAGAAGGGAAGGCTGGGCCCTaGGAACTAGAGATGATGGCA +
Preference number: 4 (lower is better)
Translates to: AQRGLNLNMPHCPCPGGEGKAGP*ELEMMA
Trigger: TGCCATCATCTCTAGTTCCCAGGGCCCAGCCTTCCC...TTCTCCCCCGGGGCAGGGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GCCCAAAGAGGTCTGAATCTGAATATGCCGCACTGTCCCTGCCCCGGGGGAGAAGCACATGGGAAAGGCTaGGGCGCATGCGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: AQRGLNLNMPHCPCPGGEAHGKG*GACAET
Trigger: TGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGC...TTCTCCCCCGGGGCAGGGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCACAGCCTACGGGCAGTaGAGCTTCTGGTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LLSWGPHGGERIRCSMTITAYGQ*SFWFGT
Trigger: TGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTGT...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp AGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGACCCGCAACTACAATGTGGCCGCTCTGCATaGTGCTGGCCAGGACGCCGA +
Preference number: 4 (lower is better)
Translates to: RIQALMSSSEDTQDPQLQCGRSA*CWPGRR
Trigger: TCGGCGTCCTGGCCAGCATCATGCAGAGCGGCCACA...TTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp TCTCAGAACACGGGAACTGACAACACTGCGAGTGGCAACTCAGCAGGTGGGCAGGGGACAATACGCAGATaGATGCGTGCCGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SQNTGTDNTASGNSAGGQGTIRR*MRAVTW
Trigger: CCAGGTGACGGCACGCATTCATCTGCGTATTGTCCC...CTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCACAAGGCCATCGATCTaGACCCCCAGCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCATRPSI*TPSQNG
Trigger: CCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGT...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp TCTCAGAACACGGGAACTGACAACACTGCGAGTGGCAACTCAGCAGGTGGGCAGGGATTCGATGCAGCATaGCGATCCCTTCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SQNTGTDNTASGNSAGGQGFDAA*RSLPPR
Trigger: CCTGGGAGGAAGGGATCGTCATGCTGCATCGAATCC...CTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCAGGTGGAGGTTGCAGTaGGCCAAGATCTCACCACTG +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCARWRLQ*AKISPL
Trigger: CAGTGGTGAGATCTTGGCTCACTGCAACCTCCACCT...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp AAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCCTCGTACACCGGGATaGGCGTGTGGCCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KGQHGQGHRSEPPAKMGAPRTPG*ACGRSA
Trigger: TGCAGAGCGGCCACACGCGCATCCCGGTGTACGAGG...AGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCTCACCTGGGTCGGGCTaGAGGTCATGGCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFSPGSG*RSWRMG
Trigger: GCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGA...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATCTGTTCCCCAGATCACGCAGATGAATGCGTaGCGTCACCTGGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: KLLLSSLQLPTCSSVPQITQMNA*RHLGRA
Trigger: AGCCCGACCCAGGTGACGGCACGCATTCATCTGCGT...GATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCCACAAAGGCAGTAACTaGACTCACAAGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCHKGSN*THKVAQ
Trigger: CTGAGCCACCTTGTGAGTGCAGTTACTGCCTTTGTG...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGTCCTGGATTGGCTGCTaGAGCAGAAAAGGGACATTG +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGSWIGC*SRKGTL
Trigger: CAATGTCCCTTTTCTGCTGCAGCAGCCAATCCAGGA...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCTCATGGCGGATGGGCTaGAGCGAGGACACCGGGGAC +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFSWRMG*SEDTGD
Trigger: GTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGA...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATAACCCCCAGCCAAAATaGGTGCTCTCGGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDNPQPK*VLSACS
Trigger: TGAGCAAGCCGAGAGCACCCATTTTGGCTGGGGGTT...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp AGGGTGCGTGGGGCCCTTACCTTTACAACTTCCTATCATCTGAAATTATTTCAAGCGCGACGGGCAGAGTaGGCAGGACGGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RVRGALTFTTSYHLKLFQARRAE*AGRPGG
Trigger: GCCGCCTGGCCGTCCTGCTCACTCTGCCCGTCGCGC...TTGAAATAATTTCAGATGATAGGAAGTTGTAAAGGTAAGGGCCCCACGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGGGGACTTCCCTCGCTTaGATTCCTCCAGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSGTSLA*IPPGQR
Trigger: ACGCTGTCCTGGAGGAATTCAAGCGAGGGAAGTCCC...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCCATCATCAGACACCTTaGACAAGGAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCHHQTP*TRRTPP
Trigger: AGGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATG...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GGCAGGCGGGCACAAAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATGTGGCCAAGAGCAGCTaGGGCGAGATTGTTACTTTA +
Preference number: 4 (lower is better)
Translates to: GRRAQNFCSAHSSSPRAHVAKSS*GEIVTL
Trigger: TAAAGTAACAATCTCGCCTCAGCTGCTCTTGGCCAC...ATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCTCAGAACACGGGAACTaGCAACACTGCGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCASEHGN*QHCEWQ
Trigger: TTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGA...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GCCCAAAGAGGTCTGAATCTGAATATGCCGCACTGTCCCTGCCCCGGGGGAGAAGATCCTATGTCCTTGTaGTGCCCGTTTCCACACAGC +
Preference number: 4 (lower is better)
Translates to: AQRGLNLNMPHCPCPGGEDPMSL*CPFPHS
Trigger: GCTGTGTGGAAACGGGCATCACAAGGACATAGGATC...TTCTCCCCCGGGGCAGGGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGTGCATTGAGGTACTaGAGTCGCGTAACCTTGATG +
Preference number: 4 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCSALRY*SRVTLM
Trigger: CATCAAGGTTACGCGACTGCAGTACCTCAATGCACT...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGAGTGCATTGAGGTACTaGAGTCGCGTAACCTTGATG +
Preference number: 4 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGSALRY*SRVTLM
Trigger: CATCAAGGTTACGCGACTGCAGTACCTCAATGCACT...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGAGGACCAAGAGCTGTTaGCGAAGCCCGGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWRTKSC*RSPGRR
Trigger: TCTTCGGCCCGGGCTTCGCCAACAGCTCTTGGTCCT...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCGGCTGTGGGGAGGTGTaGAGCAGGTGCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFGCGEV*SRCNRQ
Trigger: CTGCCTGTTGCACCTGCTCCACACCTCCCCACAGCC...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCACACTCCATAGTACGTaGAGGCCCCATTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LLSWGPHGGERIRCSMTITLHST*RPHSQT
Trigger: AGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGT...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCTCCCTACCCAATCTATaGTCCTATGTCCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVSLPNL*SYVLVM
Trigger: CATCACAAGGACATAGGATCATAGATTGGGTAGGGA...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGGGCAGGCAGATCACCTaGGGTCAGGAGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSGRQIT*GQEFKI
Trigger: GATCTTGAACTCCTGACCTCAGGTGATCTGCCTGCC...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGCAATACGCAGATGAATaGGTGCCGTCACCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSQYADE*VPSPGS
Trigger: CGACCCAGGTGACGGCACGCATTCATCTGCGTATTG...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATCTGTTCCCCAGATCCTGCCTGGAATAACCTaGAGGTCGGTGTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KLLLSSLQLPTCSSVPQILPGIT*RSVFSG
Trigger: CCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAG...GATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GGCAGGCGGGCACAAAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATAAACTAGATGAAGGGTaGGTGGGGCCCTTACCTTTA +
Preference number: 4 (lower is better)
Translates to: GRRAQNFCSAHSSSPRAHKLDEG*VGPLPL
Trigger: TAAAGGTAAGGGCCCCACGCACCCTTCATCTAGTTT...ATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCCAAACTGTTGACACATaGAATGCCTGGATGATCTCC +
Preference number: 4 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVQTVDT*NAWMIS
Trigger: GGAGATCATCCAGGCATTGCATGTGTCAACAGTTTG...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp AAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATCTGTTCCCCAGATCGCATGTCCACGATGTTaGAGCGCTCCTCCTCGTACA +
Preference number: 4 (lower is better)
Translates to: KLLLSSLQLPTCSSVPQIACPRC*SAPPRT
Trigger: TGTACGAGGAGGAGCGCTCCAACATCGTGGACATGC...GATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCTCAAACCTCACTTCCTaGTTGACACTGGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: LLSWGPHGGERIRCSMTISNLTS*LTLGCF
Trigger: GAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGA...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATCATCATCAGACACCTTaGACAAGGAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDHHQTP*TRRTPP
Trigger: AGGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATG...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp TCTCAGAACACGGGAACTGACAACACTGCGAGTGGCAACTCAGCAGGTGGGCAGGTGGCCAAGAGCAGCTaGGGCGAGATTGTTACTTTA +
Preference number: 4 (lower is better)
Translates to: SQNTGTDNTASGNSAGGQVAKSS*GEIVTL
Trigger: TAAAGTAACAATCTCGCCTCAGCTGCTCTTGGCCAC...CTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATACACTCCATAGTACGTaGAGGCCCCATTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDTLHST*RPHSQT
Trigger: AGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGT...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCGAGGGCAGGGCCGGCTaGAGGATCCAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTAEGRAG*RIQALM
Trigger: CATCAATGCCTGGATCCTTCAGCCGGCCCTGCCCTC...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGGCATGCGCTGAAACATaGCACCATCAGGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWACAET*HHQGSQ
Trigger: CTGGCTTCCCTGATGGTGTCATGTTTCAGCGCATGC...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCCGTTTCCACACAGCTaGAGAACTACGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCAPFPHS*RTTEGK
Trigger: TTTTCCTTCCGTAGTTCTTCAGCTGTGTGGAAACGG...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CATCAGGGAAGCCAGAAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGACAGGAGAATGGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HQGSQKGQHGQGHRSEPPDRRMA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCCATTCTCCTGTC...TGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTCGCGTGTGGCCGCTCTaGATGATGCTGGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: WREDFKASVSNPGLLSEFRVWPL*MMLART
Trigger: CGTCCTGGCCAGCATCATGCAGAGCGGCCACACGCG...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGACCCGCAACTACAAAATCCACCGGCTGGCTaGGCTGGTACAGGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: RIQALMSSSEDTQDPQLQNPPAG*AGTGSG
Trigger: ACCACTACCTGTACCAGCGCAGCCAGCCGGTGGATT...TTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGGTAACCTTGATGAGCTaGAGATCAGAGAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSVTLMS*RSESAL
Trigger: GAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTAC...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGTCGGGTAGCCAGGAGTaGATTGAGGTACTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWSGSQE*IEVLQS
Trigger: CGACTGCAGTACCTCAATGCACTCCTGGCTACCCGA...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGACCCGCAACTACAACTCCAGCTCCCCACGTaGTCATCTGTTCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: RIQALMSSSEDTQDPQLQLQLPT*SSVPQI
Trigger: GATCTGGGGAACAGATGAGCACGTGGGGAGCTGGAG...TTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGCGGGCACAAAACTTCTaGTCAGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWRAQNF*SAHSSS
Trigger: GGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCG...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp AAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTTGGACCCTGCCGCTGTaGTGGTCTTCTCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: KGQHGQGHRSEPPAKMGAWTLPL*WSSHQG
Trigger: TCCTTGGTGAGAAGACCACCACAGCGGCAGGGTCCA...AGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTGAGCCGTTAAACGCCTaGGTTCCGCCCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WREDFKASVSNPGLLSEFEPLNA*VPPRAA
Trigger: GGCAGCCCTGGGCGGAACCCAGGCGTTTAACGGCTC...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGAACCCCCAGCCAAAATaGGTGCTCTCGGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWNPQPK*VLSACS
Trigger: TGAGCAAGCCGAGAGCACCCATTTTGGCTGGGGGTT...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGGGGCAGTGGAGCTTCTaGTTTGGCACATGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWGQWSF*FGTWER
Trigger: CCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCC...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCCCAGCTTGGTGTCGTTaGAGACGAAGTGGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFPAWCR*RRSGAD
Trigger: ATCCGCTCCACTTCGTCTTCAACGACACCAAGCTGG...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGACCTCACTTCCTGGTTaGCACTGGGATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSTSLPG*HWDAST
Trigger: TGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGT...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp AGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGACCCGCAACTACAAACAAGGCCATCGATCTaGACCCCCAGCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: RIQALMSSSEDTQDPQLQTRPSI*TPSQNG
Trigger: CCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGT...TTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGTGGTTGACACTGGGATaGTTCAACAGGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWWLTLG*FNRCSR
Trigger: CCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCA...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCACACAAGAGCCGTTAAACGCCTaGGTTCCGCCCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AAIGWQIKSKQIEVTATQEPLNA*VPPRAA
Trigger: GGCAGCCCTGGGCGGAACCCAGGCGTTTAACGGCTC...TTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp AGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGCCAGCAGCGATAGGTTaGCAAATTAAAAGCAAACAA +
Preference number: 4 (lower is better)
Translates to: RQLLSWGPHGGERIRCSMPAAIG*QIKSKQ
Trigger: TTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGG...CATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp AAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTACAGCCTACGGGCAGTaGAGCTTCTGGTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: KGQHGQGHRSEPPAKMGATAYGQ*SFWFGT
Trigger: TGTGCCAAACCAGAAGCTCCACTGCCCGTAGGCTGT...AGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGAGGCAGCTACTCTCCTaGGGGCCACACGGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYSLRTISKRQLLS*GPHGGE
Trigger: CTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CTGCATTACAACCATATAAGATGTAACCATGGAGGGAAACTAGATGAAGGGTGCGCAGCACGCCCTTGCTaGGATCGCTGTAGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: LHYNHIRCNHGGKLDEGCAARPC*DRCRGR
Trigger: GCGACCCCTACAGCGATCTCAGCAAGGGCGTGCTGC...GCACCCTTCATCTAGTTTCCCTCCATGGTTACATCTTATATGGTTGTAATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCAGGGCTGTGCCCTGGTaGCTCCTGTCTCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTARAVPW*LLSPKG
Trigger: TCCTTTAGGAGACAGGAGTCACCAGGGCACAGCCCT...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTGGATGCTTCAACAGGTaGAGCAGGACCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KGQHGQGHRSEPPAKMGAGCFNR*SRTFSE
Trigger: CTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCC...AGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCGTAACCTTGATGAGCTaGAGATCAGAGAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFVTLMS*RSESAL
Trigger: GAGGGCGCTCTCTGATCTGCAGCTCATCAAGGTTAC...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTGCATCCTGGATTGGCTaGTGCAGCAGAAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: KGQHGQGHRSEPPAKMGAASWIG*CSRKGT
Trigger: TGTCCCTTTTCTGCTGCAGCAGCCAATCCAGGATGC...AGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp TGTCCACCCACATCGCACCAGTGTCAGAGTCTTTGTTGGAATACTGCATTACAAGTTCTCAGGGGACTGTaGCAGGTTCTGGGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: CPPTSHQCQSLCWNTALQVLRGL*QVLGSG
Trigger: ACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAAC...TTGTAATGCAGTATTCCAACAAAGACTCTGACACTGGTGCGATGTGGGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCACTGCACTCACAAGGTaGCTCAGCCCAAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFTALTR*LSPKRS
Trigger: AGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGT...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCCCAGCAGCGATAGGTTaGCAAATTAAAAGCAAACAA +
Preference number: 4 (lower is better)
Translates to: LLSWGPHGGERIRCSMTIPAAIG*QIKSKQ
Trigger: TTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGG...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp CATCAGGGAAGCCAGAAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCTCTAAGTGCAGTATaGCATCCTGGATTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HQGSQKGQHGQGHRSEPPALSAV*HPGLAA
Trigger: AGCAGCCAATCCAGGATGCCATACTGCACTTAGAGC...TGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp AAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTACCTCACTTCCTGGTTaGCACTGGGATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: KGQHGQGHRSEPPAKMGATSLPG*HWDAST
Trigger: TGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGT...AGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCGCATGCGCTGAAACATaGCACCATCAGGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTAACAET*HHQGSQ
Trigger: CTGGCTTCCCTGATGGTGTCATGTTTCAGCGCATGC...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCACACAACTGGGGCGCATGCGCTaGAACATGACACCATCAGGG +
Preference number: 4 (lower is better)
Translates to: AAIGWQIKSKQIEVTATQLGRMR*NMTPSG
Trigger: CCCTGATGGTGTCATGTTTCAGCGCATGCGCCCCAG...TTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CATCAGGGAAGCCAGAAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCACCGTTTCCACACAGCTaGAGAACTACGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: HQGSQKGQHGQGHRSEPPPFPHS*RTTEGK
Trigger: TTTTCCTTCCGTAGTTCTTCAGCTGTGTGGAAACGG...TGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGTGGGTGAAAGGTGTATaGAACTTCTGTGAATCTGGG +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSWVKGV*NFCESG
Trigger: CCCAGATTCACAGAAGTTTCATACACCTTTCACCCA...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGTTAGGGGAACCTGGGTaGAAGGTGTATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSLGEPG*KVYETS
Trigger: AGAAGTTTCATACACCTTTCACCCAGGTTCCCCTAA...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCCGGGCACAAAACTTCTaGTCAGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTARAQNF*SAHSSS
Trigger: GGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCG...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGGACTGTGGCAGGTTCTaGGCTCGGGTAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYSLRTISKDCGRF*ARVARS
Trigger: ACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTC...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp GCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCACACAAACCCTGCCGCTGTGGTaGTCTTCTCACCAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AAIGWQIKSKQIEVTATQTLPLW*SSHQGA
Trigger: GGCTCCTTGGTGAGAAGACCACCACAGCGGCAGGGT...TTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TGTCCACCCACATCGCACCAGTGTCAGAGTCTTTGTTGGAATACTGCATTACAAGCACATGGGAAAGGCTaGGGCGCATGCGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: CPPTSHQCQSLCWNTALQAHGKG*GACAET
Trigger: TGTTTCAGCGCATGCGCCCCAGCCTTTCCCATGTGC...TTGTAATGCAGTATTCCAACAAAGACTCTGACACTGGTGCGATGTGGGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCGGGCAGTGGAGCTTCTaGTTTGGCACATGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTAGQWSF*FGTWER
Trigger: CCTTTCCCATGTGCCAAACCAGAAGCTCCACTGCCC...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp AGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGACCCGCAACTACAAGAAGGATCCAGGCATTaGTGTCTAGTTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: RIQALMSSSEDTQDPQLQEGSRH*CLVLRT
Trigger: TGTCCTCAGAACTAGACATCAATGCCTGGATCCTTC...TTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATTCAGAGTTTATTCCTTaGGGACAATTTCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDSEFIP*GQFLSK
Trigger: CTTGCTTAGAAATTGTCCTCAAGGAATAAACTCTGA...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CATCAGGGAAGCCAGAAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCATGTACATGTGACAAATaGTTTGGACTGTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: HQGSQKGQHGQGHRSEPPCTCDK*FGLSTH
Trigger: GTGGGTGGACAGTCCAAATCATTTGTCACATGTACA...TGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCCTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGCGGTGTCTCCTCGCTTaGATTCCTCCAGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYSLRTISKRCLLA*IPPGQR
Trigger: ACGCTGTCCTGGAGGAATTCAAGCGAGGAGACACCG...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377060.7
CDS-3UTR GCA 90 bp TGTCCACCCACATCGCACCAGTGTCAGAGTCTTTGTTGGAATACTGCATTACAAGTGTGGCCAGCCGGTTaGTCTCGTCAAACCTCACTT +
Preference number: 4 (lower is better)
Translates to: CPPTSHQCQSLCWNTALQVWPAG*SRQTSL
Trigger: AAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACAC...TTGTAATGCAGTATTCCAACAAAGACTCTGACACTGGTGCGATGTGGGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp GCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCACACAAAATCCACCGGCTGGCTaGGCTGGTACAGGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: AAIGWQIKSKQIEVTATQNPPAG*AGTGSG
Trigger: ACCACTACCTGTACCAGCGCAGCCAGCCGGTGGATT...TTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp AAAGTGCTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGCAGATGAATGCGTaGCGTCACCTGGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: KVLPAAIGWQIKSKQIEVTQMNA*RHLGRA
Trigger: AGCCCGACCCAGGTGACGGCACGCATTCATCTGCGT...GACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTCAATACGCAGATGAATaGGTGCCGTCACCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: WREDFKASVSNPGLLSEFQYADE*VPSPGS
Trigger: CGACCCAGGTGACGGCACGCATTCATCTGCGTATTG...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGGAGGTGTGGAGCAGGTaGAACAGGCAGCTACTCTCC +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYSLRTISKEVWSR*NRQLLS
Trigger: GGAGAGTAGCTGCCTGTTGCACCTGCTCCACACCTC...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGTCTGTTCCCCAGATCTaGGGCTGCCTAGTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYSLRTISKSVPQI*GCLVSR
Trigger: ACGGCTCACTAGGCAGCCCCAGATCTGGGGAACAGA...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGGGGAAGGCTGGGCCCTaGGAACTAGAGATGATGGCA +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYSLRTISKGKAGP*ELEMMA
Trigger: TGCCATCATCTCTAGTTCCCAGGGCCCAGCCTTCCC...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGGGGTCCAAATTCCTTTaGGAAAAGTTCCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWGSKFL*EKFQKS
Trigger: GGATTTCTGGAACTTTTCTCAAAGGAATTTGGACCC...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp TCTCAGAACACGGGAACTGACAACACTGCGAGTGGCAACTCAGCAGGTGGGCAGTCAGAGTTTATTCCTTaGGGACAATTTCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SQNTGTDNTASGNSAGGQSEFIP*GQFLSK
Trigger: CTTGCTTAGAAATTGTCCTCAAGGAATAAACTCTGA...CTGCCCACCTGCTGAGTTGCCACTCGCAGTGTTGTCAGTTCCCGTGTTCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCTTTCCAACCCGGGCTTaGTCTCAGAGTTTATTCCTT +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFFPTRA*SQSLFL
Trigger: AAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAA...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp AGGGTGCGTGGGGCCCTTACCTTTACAACTTCCTATCATCTGAAATTATTTCAAACAGGTAGTGGTGTGTaGCCAGCCGGTTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: RVRGALTFTTSYHLKLFQTGSGV*PAGCSR
Trigger: ACGAGAGCAACCGGCTGGCCACACACCACTACCTGT...TTGAAATAATTTCAGATGATAGGAAGTTGTAAAGGTAAGGGCCCCACGCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp CATCAGGGAAGCCAGAAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCACGTAGCAGCTTTATTTaGAATAGCCCCAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: HQGSQKGQHGQGHRSEPPRSSFI*NSPKLE
Trigger: TTCCAGTTTGGGGCTATTCCAAATAAAGCTGCTACG...TGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTTCTGGCTTCCCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp AAAGTGCTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCCCAGCTTGGTGTCGTTaGAGACGAAGTGGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: KVLPAAIGWQIKSKQIEVPAWCR*RRSGAD
Trigger: ATCCGCTCCACTTCGTCTTCAACGACACCAAGCTGG...GACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCGAAGGATCCAGGCATTaGTGTCTAGTTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTAEGSRH*CLVLRT
Trigger: TGTCCTCAGAACTAGACATCAATGCCTGGATCCTTC...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR TCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGGATCCTATGTCCTTGTaGTGCCCGTTTCCACACAGC +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYSLRTISKDPMSL*CPFPHS
Trigger: GCTGTGTGGAAACGGGCATCACAAGGACATAGGATC...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp CTGCATTACAACCATATAAGATGTAACCATGGAGGGAAACTAGATGAAGGGTGCTCGGGTAGCCAGGAGTaGATTGAGGTACTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LHYNHIRCNHGGKLDEGCSGSQE*IEVLQS
Trigger: CGACTGCAGTACCTCAATGCACTCCTGGCTACCCGA...GCACCCTTCATCTAGTTTCCCTCCATGGTTACATCTTATATGGTTGTAATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp GCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCACACAAGGAGAGAGGATTCGATaGAGCATGACGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: AAIGWQIKSKQIEVTATQGERIR*SMTIPS
Trigger: GGAAGGGATCGTCATGCTGCATCGAATCCTCTCTCC...TTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp AAAGTGCTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCTTCTGGTTTGGCACATaGGAAAGGCTGGGGCGCATG +
Preference number: 4 (lower is better)
Translates to: KVLPAAIGWQIKSKQIEVFWFGT*ERLGRM
Trigger: CATGCGCCCCAGCCTTTCCCATGTGCCAAACCAGAA...GACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CCA 90 bp AGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGACCCGCAACTACAAAATCACAAGCTCTGGTaGCAGGTCCACGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: RIQALMSSSEDTQDPQLQNHKLW*QVHVFL
Trigger: TAAAAATACGTGGACCTGCCACCAGAGCTTGTGATT...TTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp AGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGACCCGCAACTACAAATTAAAAGTATTAGCTaGGTGTGGTGGTGCCTACCT +
Preference number: 4 (lower is better)
Translates to: RIQALMSSSEDTQDPQLQIKSIS*VWWCLP
Trigger: AGGTAGGCACCACCACACCCAGCTAATACTTTTAAT...TTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTGGAATAGCCCCAAACTaGAAACATCCCAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: WREDFKASVSNPGLLSEFGIAPN*KHPRCP
Trigger: AGGACACCTGGGATGTTTCCAGTTTGGGGCTATTCC...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCTTTCCAACCCGGGCTTaGTCTCAGAGTTTATTCCTT +
Preference number: 4 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTAFPTRA*SQSLFL
Trigger: AAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAA...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR GCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCCACGTATTTTTAATTTaGCAGGTGATTCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFHVFLI*QVILVC
Trigger: GCACACCAGAATCACCTGGCAAATTAAAAATACGTG...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp AAAGTGCTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCCCTTCAGGGGGCCAATaGATACACCACGGAATACCA +
Preference number: 4 (lower is better)
Translates to: KVLPAAIGWQIKSKQIEVPSGGQ*IHHGIP
Trigger: TGGTATTCCGTGGTGTATGCATTGGCCCCCTGAAGG...GACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp CTGCATTACAACCATATAAGATGTAACCATGGAGGGAAACTAGATGAAGGGTGCACTGCACTCACAAGGTaGCTCAGCCCAAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LHYNHIRCNHGGKLDEGCTALTR*LSPKRS
Trigger: AGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGT...GCACCCTTCATCTAGTTTCCCTCCATGGTTACATCTTATATGGTTGTAATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCCAAAATAAGAAGAGATaGACGATTAGTGGTTACCAG +
Preference number: 4 (lower is better)
Translates to: SSSLPTQSMILCPCDARFQNKKR*TISGYQ
Trigger: CTGGTAACCACTAATCGTTCATCTCTTCTTATTTTG...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp GCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCACACAATCAAACCTCACTTCCTaGTTGACACTGGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: AAIGWQIKSKQIEVTATQSNLTS*LTLGCF
Trigger: GAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGA...TTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CAA 72 bp AGTGGTAGTTACACAGATGTACATGTGACAAATGATTaGGACTGTCCACCCACATCGCACCAGTGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SGSYTDVHVTND*DCPPTSHQCQS
Trigger: ACTCTGACACTGGTGCGATGTGGGTGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCACACAAAGGCAGTAACTaGACTCACAAGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPHKGSN*THKVAQ
Trigger: CTGAGCCACCTTGTGAGTGCAGTTACTGCCTTTGTG...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR GCA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTAAAGACAATCCCGAATaGTTACACACTATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WREDFKASVSNPGLLSEFKDNPE*LHTMLP
Trigger: TGGGAGCATAGTGTGTAAGCATTCGGGATTGTCTTT...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CCA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCATATGGCATCCTGGATTaGCTGCTGCAGCAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPYGILD*LLQQKR
Trigger: CCTTTTCTGCTGCAGCAGCCAATCCAGGATGCCATA...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR TCA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGGGGTCCAAATTCCTTTaGGAAAAGTTCCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYSLRTISKGSKFL*EKFQKS
Trigger: GGATTTCTGGAACTTTTCTCAAAGGAATTTGGACCC...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
3UTR CAA 72 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTaGAGGACAATTTCTAAGCAAGGATATCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: CFQPGLALRVYS*RTISKQGYHCC
Trigger: ACAACAGTGATATCCTTGCTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS GCA 90 bp CGCAGCACCTGCACCTCGGCAGGCGCCAGCGCCAGCGCGCTCAGCTaGAGGCCTCGCGCCAGCGCTGCCAGCGCCAGCAGCCCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: RSTCTSAGASASALS*RPRASAASASSPAA
Trigger: GGCGGCCGGGCTGCTGGCGCTGGCAGCGCTGGCGCGAGGCCTGCAGCTGAGCGCGCTGGCGCTGGCGCCTGCCGAGGTGCAGGTGCTGCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS GCA 90 bp GCACGCTGGCCGGCCGCGCGGTACAGCAGCACCGCCAGCGCCGCCTaGGCCAGGCTGGCCAGCAGCAGCAGCGCGCCCAAGGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: ARWPAARYSSTASAA*ARLASSSSAPKAQP
Trigger: CGGCTGCGCCTTGGGCGCGCTGCTGCTGCTGGCCAGCCTGGCGCAGGCGGCGCTGGCGGTGCTGCTGTACCGCGCGGCCGGCCAGCGTGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS CCA 90 bp AGGAACACGAGCCCCGCGCTGCCCAACACGGCGGGCACCGCACGCTaGCCGGCCGCGCGGTACAGCAGCACCGCCAGCGCCGCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: RNTSPALPNTAGTAR*PAARYSSTASAACA
Trigger: GGCGCAGGCGGCGCTGGCGGTGCTGCTGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTGTTGGGCAGCGCGGGGCTCGTGTTCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS GCA 90 bp CGGCGGCCGGCACCACCTCTCCCACCAGGAACACGAGCCCCGCGCTaGCCAACACGGCGGGCACCGCACGCTGGCCGGCCGCGCGGTACA +
Preference number: 5 (lower is better)
Translates to: RRPAPPLPPGTRAPR*PTRRAPHAGRPRGT
Trigger: TGTACCGCGCGGCCGGCCAGCGTGCGGTGCCCGCCGTGTTGGGCAGCGCGGGGCTCGTGTTCCTGGTGGGAGAGGTGGTGCCGGCCGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS GCA 90 bp AGAAGCCCAGCACTCGCGGGCCCGGCGCGGCCTCCCCCGCGGCGTTaGCCAGGCAGAGCGCGGCGAACAACCAGCCTAACCGACCCGCCG +
Preference number: 5 (lower is better)
Translates to: RSPALAGPARPPPRR*PGRARRTTSLTDPP
Trigger: CGGCGGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGCCGCGGGGGAGGCCGCGCCGGGCCCGCGAGTGCTGGGCTTCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS CCA 90 bp AAGAGCTGTTGGCGAAGCCCGGGCCGAAGAGGCGCAGGAGGAAGGTaGCGTCCGGCGTGTCCCGCGCCGCCCCTCCGCGTACCCAACCCG +
Preference number: 5 (lower is better)
Translates to: KSCWRSPGRRGAGGR*RPACPAPPLRVPNP
Trigger: CGGGTTGGGTACGCGGAGGGGCGGCGCGGGACACGCCGGACGCCACCTTCCTCCTGCGCCTCTTCGGCCCGGGCTTCGCCAACAGCTCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS CCA 90 bp ATCTGTTCCCCAGATCTGGGGCTGCCTAGTGAGCCGTTAAACGCCTaGGTTCCGCCCAGGGCTGCCTTCCACCGGGACGCCGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ICSPDLGLPSEPLNA*VPPRAAFHRDAGPA
Trigger: AGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGCGGAACCCAGGCGTTTAACGGCTCACTAGGCAGCCCCAGATCTGGGGAACAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
CDS GCA 90 bp TCGGGACAATACGCAGATGAATGCGTGCCGTCACCTGGGTCGGGCTaGAGGTCATGGCGGATGGGCTGGAGCGAGGACACCGGGGACTGG +
Preference number: 5 (lower is better)
Translates to: SGQYADECVPSPGSG*RSWRMGWSEDTGDW
Trigger: CCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCATCTGCGTATTGTCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CCA 90 bp ATGAATGCGTGCCGTCACCTGGGTCGGGCTGCAGGTCATGGCGGATaGGCTGGAGCGAGGACACCGGGGACTGGTGAACCGAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: MNACRHLGRAAGHGG*AGARTPGTGEPRMA
Trigger: TGCCATCCTCGGTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCCAGGACCAAGAGCTGTaGGCGAAGCCCGGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LLSWGPHGGERIRCSMTIQDQEL*AKPGPK
Trigger: CTTCGGCCCGGGCTTCGCCAACAGCTCTTGGTCCTG...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS TCA 90 bp CAGATCAGAGAGCGCCCTCACGGTGTAGTCGGGACAATACGCAGATaGATGCGTGCCGTCACCTGGGTCGGGCTGCAGGTCATGGCGGAT +
Preference number: 5 (lower is better)
Translates to: QIRERPHGVVGTIRR*MRAVTWVGLQVMAD
Trigger: ATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCATCTGCGTATTGTCCCGACTACACCGTGAGGGCGCTCTCTGATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS GCA 90 bp GTGGTCTTCTCACCAAGGAGCCTGGTCTGGCTGCCTGGAATAACCTaGAGGTCGGTGTTCTCAGGGGACTGTGGCAGGTTCTGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: VVFSPRSLVWLPGIT*RSVFSGDCGRFWAR
Trigger: CCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CCA 90 bp CTGGACCCTGCCGCTGTGGTGGTCTTCTCACCAAGGAGCCTGGTCTaGCTGCCTGGAATAACCTGCAGGTCGGTGTTCTCAGGGGACTGT +
Preference number: 5 (lower is better)
Translates to: LDPAAVVVFSPRSLV*LPGITCRSVFSGDC
Trigger: ACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACAGCGGCAGGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
CDS CCA 90 bp GTGATGGCAGGAGCCATGCTGGCAGCTGGGAGCCTCCTCCCCTGGTaGGGACAACTGTACAGTTTCGAAGACCCACCCCACCAATCACTC +
Preference number: 5 (lower is better)
Translates to: VMAGAMLAAGSLLPW*GQLYSFEDPPHQSL
Trigger: GAGTGATTGGTGGGGTGGGTCTTCGAAACTGTACAGTTGTCCCCACCAGGGGAGGAGGCTCCCAGCTGCCAGCATGGCTCCTGCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CCA 90 bp ATGAATGCGTGCCGTCACCTGGGTCGGGCTGCAGGTCATGGCGGATaGGCTGGAGCGAGGACACCGGGGACTGGTGAACTATCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: MNACRHLGRAAGHGG*AGARTPGTGELSKE
Trigger: TTCCTTTGATAGTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CCA 90 bp GGGAAGGCTGCCGCTGTGGTGGTCTTCTCACCAAGGAGCCTGGTCTaGCTGCCTGGAATAACCTGCAGGTCGGTGTTCTCAGGGGACTGT +
Preference number: 5 (lower is better)
Translates to: GKAAAVVVFSPRSLV*LPGITCRSVFSGDC
Trigger: ACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACAGCGGCAGCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480035.1
CDS-3UTR CAA 90 bp AGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGAGCATGTCCACGATGTaGGAGCGCTCCTCCTCGTAC +
Preference number: 5 (lower is better)
Translates to: RQLLSWGPHGGERIRCSMSMSTM*ERSSSY
Trigger: GTACGAGGAGGAGCGCTCCAACATCGTGGACATGCT...CATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp TGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCTGTGTGGCCAGCCGGTaGCTCTCGTCAAACCTCACT +
Preference number: 5 (lower is better)
Translates to: CNRQLLSWGPHGGERIRCCVASR*LSSNLT
Trigger: AGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACA...GCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS TCA 90 bp GAGCGAGGACACCGGGGACTGGTGAACTATCAAAGGAACAATCAGTaGTGGCAGGAGCCATGCTGGCAGCTGGGAGCCTCCTCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: ERGHRGLVNYQRNNQ*WQEPCWQLGASSPG
Trigger: ACCAGGGGAGGAGGCTCCCAGCTGCCAGCATGGCTCCTGCCATCACTGATTGTTCCTTTGATAGTTCACCAGTCCCCGGTGTCCTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CCA 90 bp CTGGCTGCCTGGAATAACCTGCAGGTCGGTGTTCTCAGGGGACTGTaGCAGGTTCTGGGCTCGGGTAGCCAGGAGTGCATTGAGGTACTG +
Preference number: 5 (lower is better)
Translates to: LAAWNNLQVGVLRGL*QVLGSGSQECIEVL
Trigger: CAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CCA 90 bp TGCCGCTGTGGTGGTCTTCTCACCAAGGAGCCTGGTCTGGCTGCCTaGAATAACCTGCAGGTCGGTGTTCTCAGGGGACTGTGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: CRCGGLLTKEPGLAA*NNLQVGVLRGLWQV
Trigger: AACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACAGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS-3UTR CAA 90 bp CCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGGGGAGGACAGCGTCCAGCTaGGTGTCGTTGAAGACGAAG +
Preference number: 5 (lower is better)
Translates to: PRTRNYKGHLKRGLEGMGRTASS*VSLKTK
Trigger: CTTCGTCTTCAACGACACCAAGCTGGACGCTGTCCT...CCCCATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS TCA 90 bp TGCAGGTCATGGCGGATGGGCTGGAGCGAGGACACCGGGGACTGGTaGACTATCAAAGGAACAATCAGTGATGGCAGGAGCCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: CRSWRMGWSEDTGDW*TIKGTISDGRSHAG
Trigger: GCCAGCATGGCTCCTGCCATCACTGATTGTTCCTTTGATAGTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS GCA 90 bp GTTCTCAGGGGACTGTGGCAGGTTCTGGGCTCGGGTAGCCAGGAGTaGATTGAGGTACTGCAGTCGCGTAACCTGGAGGATGACAGCGTT +
Preference number: 5 (lower is better)
Translates to: VLRGLWQVLGSGSQE*IEVLQSRNLEDDSV
Trigger: AACGCTGTCATCCTCCAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CCA 90 bp GGAATAACCTGCAGGTCGGTGTTCTCAGGGGACTGTGGCAGGTTCTaGGCTCGGGTAGCCAGGAGTGCATTGAGGTACTGCAGTCGCGTA +
Preference number: 5 (lower is better)
Translates to: GITCRSVFSGDCGRF*ARVARSALRYCSRV
Trigger: TACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CCA 90 bp CCCGTCAGAAGACAGCGGAAGGAGAAACCCACCACCTCAATTGTTTaGGGTGGGAGGGTGCATATCCGCATGCCCCTGCTCCCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PVRRQRKEKPTTSIV*GGRVHIRMPLLPSS
Trigger: AGAAGAGGGGAGCAGGGGCATGCGGATATGCACCCTCCCACCCCAAACAATTGAGGTGGTGGGTTTCTCCTTCCGCTGTCTTCTGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS-3UTR CAA 90 bp CTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCTGGTGACTCCTGTCTGCAGTCGCGTAACCTaGATGAGCTGCAGATCAGAG +
Preference number: 5 (lower is better)
Translates to: LSFLPEAGLEGCALVTPVCSRVT*MSCRSE
Trigger: CTCTGATCTGCAGCTCATCAAGGTTACGCGACTGCA...GACAGGAGTCACCAGGGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp GTGCAACAGGCAGCTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGTGCAGTCGCGTAACCTaGATGAGCTGCAGATCAGAG +
Preference number: 5 (lower is better)
Translates to: VQQAATLLGATRRREDSMCSRVT*MSCRSE
Trigger: CTCTGATCTGCAGCTCATCAAGGTTACGCGACTGCA...CATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAGCTGCCTGTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS GCA 90 bp AGCCGGTTGCTCTCGTCAAACCTCACTTCCTGGTTGACACTGGGATaGTTCAACAGGTGCAGCAGGACCTTCTCAGAGATGCGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: SRLLSSNLTSWLTLG*FNRCSRTFSEMRSG
Trigger: CCCGCTGCGCATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS GCA 90 bp GTTCTCAGGGGACTGTGGCAGGTTCTGGGCTCGGGTAGCCAGGAGTaGATTGAGGTACTGCAGTCGCGTAACCTTGATGAGCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: VLRGLWQVLGSGSQE*IEVLQSRNLDELQI
Trigger: GATCTGCAGCTCATCAAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000480035.1
CDS GCA 90 bp TGTGGCAGGTTCTGGGCTCGGGTAGCCAGGAGTGCATTGAGGTACTaGAGTCGCGTAACCTGGAGGATGACAGCGTTACTGGGACCCAAT +
Preference number: 5 (lower is better)
Translates to: CGRFWARVARSALRY*SRVTWRMTALLGPN
Trigger: ATTGGGTCCCAGTAACGCTGTCATCCTCCAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS-3UTR CAA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCAGTGGAGCTTCTGGTTaGGCACATGGGAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCASGASG*AHGKGW
Trigger: CCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACT...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATAGTGGAGCTTCTGGTTaGGCACATGGGAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDSGASG*AHGKGW
Trigger: CCAGCCTTTCCCATGTGCCAAACCAGAAGCTCCACT...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS TCA 90 bp AGTCGCGTAACCTGGAGGATGACAGCGTTACTGGGACCCAATTGGTaGAGCGAGATGCAGAAGGTAGGCAGGAAAGGTGACACCGTGCCC +
Preference number: 5 (lower is better)
Translates to: SRVTWRMTALLGPNW*SEMQKVGRKGDTVP
Trigger: GGGCACGGTGTCACCTTTCCTGCCTACCTTCTGCATCTCGCTTCACCAATTGGGTCCCAGTAACGCTGTCATCCTCCAGGTTACGCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS-3UTR CAA 90 bp GACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTCTCGTGTGTGGCCAGCCGGTaGCTCTCGTCAAACCTCACT +
Preference number: 5 (lower is better)
Translates to: DNMDKAIDLNPQPKWVLSCVASR*LSSNLT
Trigger: AGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACA...CGAGAGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp GGCAGGCGGGCACAAAACTTCTGCTCAGCTCACTCCAGCTCCCCACGTGCTCATGTTTCCAACCCGGGCTaGCTCTCAGAGTTTATTCCT +
Preference number: 5 (lower is better)
Translates to: GRRAQNFCSAHSSSPRAHVSNPG*LSEFIP
Trigger: AGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAAC...ATGAGCACGTGGGGAGCTGGAGTGAGCTGAGCAGAAGTTTTGTGCCCGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCTCATCATCAGACACCTaGAACAAGGAGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLSWGPHGGERIRCSMTISSSDT*NKENSS
Trigger: GGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATGA...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS TCA 90 bp GGTGAACCGAGGATGGCACAGTTAGGGCCGACACTCCATAGTACGTaGAGGCCCCATTCTCAAACTTCAGACCCTCTTTCCCGATCTCCA +
Preference number: 5 (lower is better)
Translates to: GEPRMAQLGPTLHST*RPHSQTSDPLSRSP
Trigger: TGGAGATCGGGAAAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCGGTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS TCA 90 bp GCTTACCCGAGGATGGCACAGTTAGGGCCGACACTCCATAGTACGTaGAGGCCCCATTCTCAAACTTCAGACCCTCTTTCCCGATCTCCA +
Preference number: 5 (lower is better)
Translates to: AYPRMAQLGPTLHST*RPHSQTSDPLSRSP
Trigger: TGGAGATCGGGAAAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCTCGGGTAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS GCA 90 bp TCGTCAAACCTCACTTCCTGGTTGACACTGGGATGCTTCAACAGGTaGAGCAGGACCTTCTCAGAGATGCGCAGCGGGCTGAATACATCC +
Preference number: 5 (lower is better)
Translates to: SSNLTSWLTLGCFNR*SRTFSEMRSGLNTS
Trigger: GGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS CCA 90 bp ACTATCAAAGGAACAATCAGTGATGGCAGGAGCCATGCTGGCAGCTaGGAGCCTCCTCCCCTGGTGGGGACAACTGTACAGTTTCGAAGA +
Preference number: 5 (lower is better)
Translates to: TIKGTISDGRSHAGS*EPPPLVGTTVQFRR
Trigger: TCTTCGAAACTGTACAGTTGTCCCCACCAGGGGAGGAGGCTCCCAGCTGCCAGCATGGCTCCTGCCATCACTGATTGTTCCTTTGATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS-3UTR CAA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATTCATCATCAGACACCTaGAACAAGGAGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDSSSDT*NKENSS
Trigger: GGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATGA...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp CAAAATGGGTGCTCTCGGCTTGCTCAAAAAGTGCTGCCAGCAGCGATAGGTTGGATGGGTGCTCTCGGCTaGCTCAAAAAGTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QNGCSRLAQKVLPAAIGWMGALG*LKKCCQ
Trigger: CTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCAT...CCAACCTATCGCTGCTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp GCCCAAAGAGGTCTGAATCTGAATATGCCGCACTGTCCCTGCCCCGGGGGAGAACATGTGACAAATGATTaGGACTGTCCACCCACATCG +
Preference number: 5 (lower is better)
Translates to: AQRGLNLNMPHCPCPGGEHVTND*DCPPTS
Trigger: CGATGTGGGTGGACAGTCCAAATCATTTGTCACATG...TTCTCCCCCGGGGCAGGGACAGTGCGGCATATTCAGATTCAGACCTCTTTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS TCA 90 bp GGGACCCAATTGGTGAAGCGAGATGCAGAAGGTAGGCAGGAAAGGTaGCACCGTGCCCGAAGAGGACAGAGGCACAACTTTAAGCTAGTT +
Preference number: 5 (lower is better)
Translates to: GTQLVKRDAEGRQER*HRARRGQRHNFKLV
Trigger: AACTAGCTTAAAGTTGTGCCTCTGTCCTCTTCGGGCACGGTGTCACCTTTCCTGCCTACCTTCTGCATCTCGCTTCACCAATTGGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS GCA 90 bp ACGCGCACTAGTCCACAGTCATTTATCAACTGCAGTTTCCAACTGTaGCAAAGAGGGAAAGGTCTACTGGGAAGGCTGCCGCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TRTSPQSFINCSFQL*QRGKGLLGRLPLWW
Trigger: CCACCACAGCGGCAGCCTTCCCAGTAGACCTTTCCCTCTTTGGCACAGTTGGAAACTGCAGTTGATAAATGACTGTGGACTAGTGCGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480035.1
CDS CCA 90 bp TGGGGACAACTGTACAGTTTCGAAGACCCACCCCACCAATCACTCTaGAGAGGCAATGTGCATGGGAAGCTGGGAGAGAAGGACAAACAC +
Preference number: 5 (lower is better)
Translates to: WGQLYSFEDPPHQSL*RGNVHGKLGEKDKH
Trigger: GTGTTTGTCCTTCTCTCCCAGCTTCCCATGCACATTGCCTCTCCAGAGTGATTGGTGGGGTGGGTCTTCGAAACTGTACAGTTGTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS-3UTR CAA 90 bp GCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCACACAACAGGACCAAGAGCTGTaGGCGAAGCCCGGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: AAIGWQIKSKQIEVTATQQDQEL*AKPGPK
Trigger: CTTCGGCCCGGGCTTCGCCAACAGCTCTTGGTCCTG...TTGTGTGGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp TCCTCCTCCCTCCCTACCCAATCTATGATCCTATGTCCTTGTGATGCCCGTTTCTCCAGCTTGGTGTCGTaGAAGACGAAGTGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: SSSLPTQSMILCPCDARFSSLVS*KTKWSG
Trigger: TCCGCTCCACTTCGTCTTCAACGACACCAAGCTGGA...GAAACGGGCATCACAAGGACATAGGATCATAGATTGGGTAGGGAGGGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp AAAGGACAACATGGACAAGGCCATCGATCTGAACCCCCAGCCAAAATGGGTGCTGTAGCCAGGAGTGCATaGAGGTACTGCAGTCGCGTA +
Preference number: 5 (lower is better)
Translates to: KGQHGQGHRSEPPAKMGAVARSA*RYCSRV
Trigger: TACGCGACTGCAGTACCTCAATGCACTCCTGGCTAC...AGCACCCATTTTGGCTGGGGGTTCAGATCGATGGCCTTGTCCATGTTGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCGCAGCTGAGGCGAGATaGTTACTTTATATTCATCAT +
Preference number: 5 (lower is better)
Translates to: LLSWGPHGGERIRCSMTIAAEAR*LLYIHH
Trigger: ATGATGAATATAAAGTAACAATCTCGCCTCAGCTGC...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp GAGATGATGGCATTCCTTTCATTCCTTCCTGAGGCGGGCCTGGAGGGCTGTGCCCCAGTGTCAGAGTCTTaGTTGGAATACTGCATTACA +
Preference number: 5 (lower is better)
Translates to: EMMAFLSFLPEAGLEGCAPVSES*LEYCIT
Trigger: TGTAATGCAGTATTCCAACAAAGACTCTGACACTGG...GGCACAGCCCTCCAGGCCCGCCTCAGGAAGGAATGAAAGGAATGCCATCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CAA 90 bp GACACCCAGGACCCGCAACTACAAGGGCCATCTAAAACGTGGCCTGGAGGGGATGCAGCTGAGGCGAGATaGTTACTTTATATTCATCAT +
Preference number: 5 (lower is better)
Translates to: DTQDPQLQGPSKTWPGGDAAEAR*LLYIHH
Trigger: ATGATGAATATAAAGTAACAATCTCGCCTCAGCTGC...ATCCCCTCCAGGCCACGTTTTAGATGGCCCTTGTAGTTGCGGGTCCTGGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp AGGATCCAGGCATTGATGTCTAGTTCTGAGGACACCCAGGACCCGCAACTACAAAACCTCACTTCCTGGTaGACACTGGGATGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: RIQALMSSSEDTQDPQLQNLTSW*TLGCFN
Trigger: GTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTT...TTGTAGTTGCGGGTCCTGGGTGTCCTCAGAACTAGACATCAATGCCTGGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp CTACTCTCCTGGGGGCCACACGGCGGAGAGAGGATTCGATGCAGCATGACGATCCTCAGAGTTTATTCCTaGAGGACAATTTCTAAGCAA +
Preference number: 5 (lower is better)
Translates to: LLSWGPHGGERIRCSMTILRVYS*RTISKQ
Trigger: TTGCTTAGAAATTGTCCTCAAGGAATAAACTCTGAG...GATCGTCATGCTGCATCGAATCCTCTCTCCGCCGTGTGGCCCCCAGGAGAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS TCA 90 bp ACATCCACTTCTCGGGACAGGAAGCGCTGGGTGGCCAAGAGCAGCTaGGGCGAGATTGTTACTTTATATTCATCATCAGACACCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TSTSRDRKRWVAKSS*GEIVTLYSSSDTLN
Trigger: GTTCAAGGTGTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGCTCTTGGCCACCCAGCGCTTCCTGTCCCGAGAAGTGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS-3UTR CAA 90 bp AAAGTGCTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCTGGGACTTCCCTCGCTaGAATTCCTCCAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: KVLPAAIGWQIKSKQIEVWDFPR*NSSRTA
Trigger: CGCTGTCCTGGAGGAATTCAAGCGAGGGAAGTCCCA...GACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CAA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGGTAGCCAGGAGTGCATaGAGGTACTGCAGTCGCGTA +
Preference number: 5 (lower is better)
Translates to: CFQPGLALRVYSLRTISKVARSA*RYCSRV
Trigger: TACGCGACTGCAGTACCTCAATGCACTCCTGGCTAC...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS CCA 90 bp AGAAGAGCAACTGAGTCAAGTGTTTTTAAGACCTTGCTTGGAAACTaGGTGCAAAGGTCTGTGTCCCTCAGGATGAGTGGAAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: RRATESSVFKTLLGN*VQRSVSLRMSGRPC
Trigger: ACAAGGCCTTCCACTCATCCTGAGGGACACAGACCTTTGCACCCAGTTTCCAAGCAAGGTCTTAAAAACACTTGACTCAGTTGCTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS-3UTR CAA 90 bp GATTGCAGTGGTAGTTACACAGATGTACATGTGACAAATGATTTGGACTGTCCAAGCATGTCCACGATGTaGGAGCGCTCCTCCTCGTAC +
Preference number: 5 (lower is better)
Translates to: DCSGSYTDVHVTNDLDCPSMSTM*ERSSSY
Trigger: GTACGAGGAGGAGCGCTCCAACATCGTGGACATGCT...TGGACAGTCCAAATCATTTGTCACATGTACATCTGTGTAACTACCACTGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CAA 90 bp AAAGTGCTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCATGGGTGCTCTCGGCTaGCTCAAAAAGTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: KVLPAAIGWQIKSKQIEVMGALG*LKKCCQ
Trigger: CTGGCAGCACTTTTTGAGCAAGCCGAGAGCACCCAT...GACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp TGGAGAGAGGATTTTAAAGCATCTGTTTCCAACCCGGGCTTGCTCTCAGAGTTTGTTTCCAACCCGGGCTaGCTCTCAGAGTTTATTCCT +
Preference number: 5 (lower is better)
Translates to: WREDFKASVSNPGLLSEFVSNPG*LSEFIP
Trigger: AGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAAC...AAACTCTGAGAGCAAGCCCGGGTTGGAAACAGATGCTTTAAAATCCTCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp AAAGTGCTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCAACCTCACTTCCTGGTaGACACTGGGATGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: KVLPAAIGWQIKSKQIEVNLTSW*TLGCFN
Trigger: GTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTT...GACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCGATATCACTGTTGTTTaGACCTTCAGTCCCATTTAT +
Preference number: 5 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTADITVV*TFSPIY
Trigger: ATAAATGGGACTGAAGGTCAAAACAACAGTGATATC...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp CTGCCAGCAGCGATAGGTTGGCAAATTAAAAGCAAACAAATAGAGGTCACGGCCCTCAGAGTTTATTCCTaGAGGACAATTTCTAAGCAA +
Preference number: 5 (lower is better)
Translates to: LPAAIGWQIKSKQIEVTALRVYS*RTISKQ
Trigger: TTGCTTAGAAATTGTCCTCAAGGAATAAACTCTGAG...GGCCGTGACCTCTATTTGTTTGCTTTTAATTTGCCAACCTATCGCTGCTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS-3UTR CAA 90 bp AGGGTGCGTGGGGCCCTTACCTTTACAACTTCCTATCATCTGAAATTATTTCAACCACGTATTTTTAATTaGCCAGGTGATTCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: RVRGALTFTTSYHLKLFQPRIFN*PGDSGV
Trigger: CACACCAGAATCACCTGGCAAATTAAAAATACGTGG...TTGAAATAATTTCAGATGATAGGAAGTTGTAAAGGTAAGGGCCCCACGCACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305510.4
CDS-3UTR CAA 90 bp TGTTTCCAACCCGGGCTTGCTCTCAGAGTTTATTCCTTGAGGACAATTTCTAAGGATATCACTGTTGTTTaGACCTTCAGTCCCATTTAT +
Preference number: 5 (lower is better)
Translates to: CFQPGLALRVYSLRTISKDITVV*TFSPIY
Trigger: ATAAATGGGACTGAAGGTCAAAACAACAGTGATATC...CTTAGAAATTGTCCTCAAGGAATAAACTCTGAGAGCAAGCCCGGGTTGGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS CAA 90 bp CAGAAGCCCAGCACTCGCGGGCCCGGCGCGGCCTCCCCCGCGGCGTaGCCCAGGCAGAGCGCGGCGAACAACCAGCCTAACCGACCCGCC +
Preference number: 6 (lower is better)
Translates to: QKPSTRGPGAASPAA*PRQSAANNQPNRPA
Trigger: GGCGGGTCGGTTAGGCTGGTTGTTCGCCGCGCTCTGCCTGGGCAACGCCGCGGGGGAGGCCGCGCCGGGCCCGCGAGTGCTGGGCTTCTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS GCA 72 bp GCACCACCTCTCCCACCAGGAACACGAGCCCCGCGCTaGCCAACACGGCGGGCACCGCACGCTGGCCGGCCG +
Preference number: 6 (lower is better)
Translates to: APPLPPGTRAPR*PTRRAPHAGRP
Trigger: CGGCCGGCCAGCGTGCGGTGCCCGCCGTGTTGGGCAGCGCGGGGCTCGTGTTCCTGGTGGGAGAGGTGGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS TCA 72 bp CGTCCTCCACGGTCCGGCAGCGCAGCACGCCCTTGCTaGGATCGCTGTAGGGGTCGCCGCCGCCGCGCGCCA +
Preference number: 6 (lower is better)
Translates to: RPPRSGSAARPC*DRCRGRRRRAP
Trigger: TGGCGCGCGGCGGCGGCGACCCCTACAGCGATCTCAGCAAGGGCGTGCTGCGCTGCCGGACCGTGGAGGACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS GCA 72 bp TCCGCCCAGGGCTGCCTTCCACCGGGACGCCGGGCCTaGTGTGGCTGGACCCTGCCGCTGTGGTGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: SAQGCLPPGRRA*CGWTLPLWWSS
Trigger: AGAAGACCACCACAGCGGCAGGGTCCAGCCACAGCAGGCCCGGCGTCCCGGTGGAAGGCAGCCCTGGGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
CDS CCA 72 bp TGCCGTCACCTGGGTCGGGCTGCAGGTCATGGCGGATaGGCTGGAGCGAGGACACCGGGGACTGGTGAACCG +
Preference number: 6 (lower is better)
Translates to: CRHLGRAAGHGG*AGARTPGTGEP
Trigger: CGGTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305510.4
ENST00000377060.7
CDS CCA 72 bp CCAGATCTGGGGCTGCCTAGTGAGCCGTTAAACGCCTaGGTTCCGCCCAGGGCTGCCTTCCACCGGGACGCC +
Preference number: 6 (lower is better)
Translates to: PDLGLPSEPLNA*VPPRAAFHRDA
Trigger: GGCGTCCCGGTGGAAGGCAGCCCTGGGCGGAACCCAGGCGTTTAACGGCTCACTAGGCAGCCCCAGATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
CDS CCA 72 bp TGCCGTCACCTGGGTCGGGCTGCAGGTCATGGCGGATaGGCTGGAGCGAGGACACCGGGGACTGGTGAACTA +
Preference number: 6 (lower is better)
Translates to: CRHLGRAAGHGG*AGARTPGTGEL
Trigger: TAGTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS GCA 72 bp TACGCAGATGAATGCGTGCCGTCACCTGGGTCGGGCTaGAGGTCATGGCGGATGGGCTGGAGCGAGGACACC +
Preference number: 6 (lower is better)
Translates to: YADECVPSPGSG*RSWRMGWSEDT
Trigger: GGTGTCCTCGCTCCAGCCCATCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCATCTGCGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS TCA 72 bp GAGCGCCCTCACGGTGTAGTCGGGACAATACGCAGATaGATGCGTGCCGTCACCTGGGTCGGGCTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: ERPHGVVGTIRR*MRAVTWVGLQV
Trigger: GACCTGCAGCCCGACCCAGGTGACGGCACGCATTCATCTGCGTATTGTCCCGACTACACCGTGAGGGCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CCA 72 bp GCAGGAGCCATGCTGGCAGCTGGGAGCCTCCTCCCCTaGTGGGGACAACTGTACAGTTTCGAAGACCCACCC +
Preference number: 6 (lower is better)
Translates to: AGAMLAAGSLLP*WGQLYSFEDPP
Trigger: GGGTGGGTCTTCGAAACTGTACAGTTGTCCCCACCAGGGGAGGAGGCTCCCAGCTGCCAGCATGGCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS GCA 72 bp GGGGTGGAGTGGGCCACAAAGTTGAGCGATGAAGAATaGTGCCCTCCCTCCTGGAAGCCCAGGGGCTACACC +
Preference number: 6 (lower is better)
Translates to: GVEWATKLSDEE*CPPSWKPRGYT
Trigger: GGTGTAGCCCCTGGGCTTCCAGGAGGGAGGGCAGCATTCTTCATCGCTCAACTTTGTGGCCCACTCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CCA 72 bp CCACCGGCTGGCTGCGCTGGTACAGGTAGTGGTGTGTaGCCAGCCGGTTGCTCTCGTCAAACCTCACTTCCT +
Preference number: 6 (lower is better)
Translates to: PPAGCAGTGSGV*PAGCSRQTSLP
Trigger: AGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCACTACCTGTACCAGCGCAGCCAGCCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS TCA 72 bp GGTGCAGCAGGACCTTCTCAGAGATGCGCAGCGGGCTaGATACATCCACTTCTCGGGACAGGAAGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: GAAGPSQRCAAG*IHPLLGTGSAG
Trigger: CCCAGCGCTTCCTGTCCCGAGAAGTGGATGTATTCAGCCCGCTGCGCATCTCTGAGAAGGTCCTGCTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS GCA 72 bp TCACGGTGTAGTCGGGACAATACGCAGATGAATGCGTaGCGTCACCTGGGTCGGGCTGCAGGTCATGGCGGA +
Preference number: 6 (lower is better)
Translates to: SRCSRDNTQMNA*RHLGRAAGHGG
Trigger: TCCGCCATGACCTGCAGCCCGACCCAGGTGACGGCACGCATTCATCTGCGTATTGTCCCGACTACACCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CCA 72 bp TGCAGGTCGGTGTTCTCAGGGGACTGTGGCAGGTTCTaGGCTCGGGTAGCCAGGAGTGCATTGAGGTACTGC +
Preference number: 6 (lower is better)
Translates to: CRSVFSGDCGRF*ARVARSALRYC
Trigger: GCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CCA 72 bp GGAACAATCAGTGATGGCAGGAGCCATGCTGGCAGCTaGGAGCCTCCTCCCCTGGTGGGGACAACTGTACAG +
Preference number: 6 (lower is better)
Translates to: GTISDGRSHAGS*EPPPLVGTTVQ
Trigger: CTGTACAGTTGTCCCCACCAGGGGAGGAGGCTCCCAGCTGCCAGCATGGCTCCTGCCATCACTGATTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS TCA 72 bp TTTTGCAGGGGTGGAGTGGGCCACAAAGTTGAGCGATaGAGAATGCTGCCCTCCCTCCTGGAAGCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: FCRGGVGHKVER*RMLPSLLEAQG
Trigger: CCCCTGGGCTTCCAGGAGGGAGGGCAGCATTCTTCATCGCTCAACTTTGTGGCCCACTCCACCCCTGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS GCA 72 bp TCACCAAGGAGCCTGGTCTGGCTGCCTGGAATAACCTaGAGGTCGGTGTTCTCAGGGGACTGTGGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: SPRSLVWLPGIT*RSVFSGDCGRF
Trigger: GAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS GCA 72 bp GGACTGTGGCAGGTTCTGGGCTCGGGTAGCCAGGAGTaGATTGAGGTACTGCAGTCGCGTAACCTGGAGGAT +
Preference number: 6 (lower is better)
Translates to: GLWQVLGSGSQE*IEVLQSRNLED
Trigger: ATCCTCCAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CCA 72 bp GGTGGTCTTCTCACCAAGGAGCCTGGTCTGGCTGCCTaGAATAACCTGCAGGTCGGTGTTCTCAGGGGACTG +
Preference number: 6 (lower is better)
Translates to: GGLLTKEPGLAA*NNLQVGVLRGL
Trigger: CAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CAA 90 bp TCAGGGGACTGTGGCAGGTTCTGGGCTCGGGTAGCCAGGAGTGCATaGAGGTACTGCAGTCGCGTAACCTGGAGGATGACAGCGTTACTG +
Preference number: 6 (lower is better)
Translates to: SGDCGRFWARVARSA*RYCSRVTWRMTALL
Trigger: CAGTAACGCTGTCATCCTCCAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS TCA 72 bp CACCGGGGACTGGTGAACTATCAAAGGAACAATCAGTaGTGGCAGGAGCCATGCTGGCAGCTGGGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: HRGLVNYQRNNQ*WQEPCWQLGAS
Trigger: GGAGGCTCCCAGCTGCCAGCATGGCTCCTGCCATCACTGATTGTTCCTTTGATAGTTCACCAGTCCCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS TCA 72 bp TGGCGGATGGGCTGGAGCGAGGACACCGGGGACTGGTaGACTATCAAAGGAACAATCAGTGATGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: WRMGWSEDTGDW*TIKGTISDGRS
Trigger: GCTCCTGCCATCACTGATTGTTCCTTTGATAGTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS GCA 72 bp CTCACTTCCTGGTTGACACTGGGATGCTTCAACAGGTaGAGCAGGACCTTCTCAGAGATGCGCAGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: LTSWLTLGCFNR*SRTFSEMRSGL
Trigger: CAGCCCGCTGCGCATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS GCA 72 bp GGACTGTGGCAGGTTCTGGGCTCGGGTAGCCAGGAGTaGATTGAGGTACTGCAGTCGCGTAACCTTGATGAG +
Preference number: 6 (lower is better)
Translates to: GLWQVLGSGSQE*IEVLQSRNLDE
Trigger: CTCATCAAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000480035.1
CDS CCA 72 bp GTGGCCAGCCGGTTGCTCTCGTCAAACCTCACTTCCTaGTTGACACTGGGATGCTTCAACAGGTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: VASRLLSSNLTS*LTLGCFNRCSR
Trigger: CCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS CCA 72 bp TGGAATAACCTGCAGGTCGGTGTTCTCAGGGGACTGTaGCAGGTTCTGGGCTCGGGTAGCCAGGAGTGCATT +
Preference number: 6 (lower is better)
Translates to: WNNLQVGVLRGL*QVLGSGSQECI
Trigger: AATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACAGTCCCCTGAGAACACCGACCTGCAGGTTATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000480035.1
CDS CCA 72 bp AGACAGCGGAAGGAGAAACCCACCACCTCAATTGTTTaGGGTGGGAGGGTGCATATCCGCATGCCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: RQRKEKPTTSIV*GGRVHIRMPLL
Trigger: GAGCAGGGGCATGCGGATATGCACCCTCCCACCCCAAACAATTGAGGTGGTGGGTTTCTCCTTCCGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CCA 72 bp ACAAAGTTGAGCGATGAAGAATGCTGCCCTCCCTCCTaGAAGCCCAGGGGCTACACCACCTTGTGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: TKLSDEECCPPS*KPRGYTTLWGG
Trigger: ACCACCCCACAAGGTGGTGTAGCCCCTGGGCTTCCAGGAGGGAGGGCAGCATTCTTCATCGCTCAACTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CAA 72 bp GCCAGCCGGTTGCTCTCGTCAAACCTCACTTCCTGGTaGACACTGGGATGCTTCAACAGGTGCAGCAGGACC +
Preference number: 6 (lower is better)
Translates to: ASRLLSSNLTSW*TLGCFNRCSRT
Trigger: GGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS CAA 72 bp TGTGGCAGGTTCTGGGCTCGGGTAGCCAGGAGTGCATaGAGGTACTGCAGTCGCGTAACCTTGATGAGCTGC +
Preference number: 6 (lower is better)
Translates to: CGRFWARVARSA*RYCSRVTLMSC
Trigger: GCAGCTCATCAAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000480035.1
CDS CAA 72 bp GGGAGAGGTTTTGCAGGGGTGGAGTGGGCCACAAAGTaGAGCGATGAAGAATGCTGCCCTCCCTCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: GRGFAGVEWATK*SDEECCPPSWK
Trigger: CTTCCAGGAGGGAGGGCAGCATTCTTCATCGCTCAACTTTGTGGCCCACTCCACCCCTGCAAAACCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CAA 72 bp TGTGGCAGGTTCTGGGCTCGGGTAGCCAGGAGTGCATaGAGGTACTGCAGTCGCGTAACCTGGAGGATGACA +
Preference number: 6 (lower is better)
Translates to: CGRFWARVARSA*RYCSRVTWRMT
Trigger: TGTCATCCTCCAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CAA 90 bp TGGTGTGTGGCCAGCCGGTTGCTCTCGTCAAACCTCACTTCCTGGTaGACACTGGGATGCTTCAACAGGTGCAGCAGGACCTTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: WCVASRLLSSNLTSW*TLGCFNRCSRTFSE
Trigger: CTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGGCCACACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS TCA 72 bp CCAGCCGGTTGCTCTCGTCAAACCTCACTTCCTGGTTaGCACTGGGATGCTTCAACAGGTGCAGCAGGACCT +
Preference number: 6 (lower is better)
Translates to: PAGCSRQTSLPG*HWDASTGAAGP
Trigger: AGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAGCAACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS GCA 72 bp TTCTGGGCTCGGGTAGCCAGGAGTGCATTGAGGTACTaGAGTCGCGTAACCTGGAGGATGACAGCGTTACTG +
Preference number: 6 (lower is better)
Translates to: FWARVARSALRY*SRVTWRMTALL
Trigger: CAGTAACGCTGTCATCCTCCAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CAA 72 bp AAGACAGCGGAAGGAGAAACCCACCACCTCAATTGTTaGGGGTGGGAGGGTGCATATCCGCATGCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: KTAEGETHHLNC*GWEGAYPHAPA
Trigger: AGCAGGGGCATGCGGATATGCACCCTCCCACCCCAAACAATTGAGGTGGTGGGTTTCTCCTTCCGCTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CAA 72 bp TCAGAAGACAGCGGAAGGAGAAACCCACCACCTCAATaGTTTGGGGTGGGAGGGTGCATATCCGCATGCCCC +
Preference number: 6 (lower is better)
Translates to: SEDSGRRNPPPQ*FGVGGCISACP
Trigger: GGGGCATGCGGATATGCACCCTCCCACCCCAAACAATTGAGGTGGTGGGTTTCTCCTTCCGCTGTCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS TCA 72 bp TTGGTGAAGCGAGATGCAGAAGGTAGGCAGGAAAGGTaGCACCGTGCCCGAAGAGGACAGAGGCACAACTTT +
Preference number: 6 (lower is better)
Translates to: LVKRDAEGRQER*HRARRGQRHNF
Trigger: AAAGTTGTGCCTCTGTCCTCTTCGGGCACGGTGTCACCTTTCCTGCCTACCTTCTGCATCTCGCTTCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS TCA 72 bp ACCTGGAGGATGACAGCGTTACTGGGACCCAATTGGTaGAGCGAGATGCAGAAGGTAGGCAGGAAAGGTGAC +
Preference number: 6 (lower is better)
Translates to: TWRMTALLGPNW*SEMQKVGRKGD
Trigger: GTCACCTTTCCTGCCTACCTTCTGCATCTCGCTTCACCAATTGGGTCCCAGTAACGCTGTCATCCTCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CCA 72 bp CTGTACAGTTTCGAAGACCCACCCCACCAATCACTCTaGAGAGGCAATGTGCATGGGAAGCTGGGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: LYSFEDPPHQSL*RGNVHGKLGEK
Trigger: CTTCTCTCCCAGCTTCCCATGCACATTGCCTCTCCAGAGTGATTGGTGGGGTGGGTCTTCGAAACTGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CAA 72 bp CGTAACCTGGAGGATGACAGCGTTACTGGGACCCAATaGGTGAAGCGAGATGCAGAAGGTAGGCAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: RNLEDDSVTGTQ*VKRDAEGRQER
Trigger: CCTTTCCTGCCTACCTTCTGCATCTCGCTTCACCAATTGGGTCCCAGTAACGCTGTCATCCTCCAGGTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS TCA 72 bp AGGATGGCACAGTTAGGGCCGACACTCCATAGTACGTaGAGGCCCCATTCTCAAACTTCAGACCCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: RMAQLGPTLHST*RPHSQTSDPLS
Trigger: GGAAAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGAGTGTCGGCCCTAACTGTGCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
CDS GCA 72 bp CTCTCGTCAAACCTCACTTCCTGGTTGACACTGGGATaGTTCAACAGGTGCAGCAGGACCTTCTCAGAGATG +
Preference number: 6 (lower is better)
Translates to: LSSNLTSWLTLG*FNRCSRTFSEM
Trigger: CATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGACGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS TCA 72 bp TCTCGGGACAGGAAGCGCTGGGTGGCCAAGAGCAGCTaGGGCGAGATTGTTACTTTATATTCATCATCAGAC +
Preference number: 6 (lower is better)
Translates to: SRDRKRWVAKSS*GEIVTLYSSSD
Trigger: GTCTGATGATGAATATAAAGTAACAATCTCGCCTCAGCTGCTCTTGGCCACCCAGCGCTTCCTGTCCCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305510.4
ENST00000377060.7
ENST00000465224.5
ENST00000494595.1
CDS CCA 72 bp ACTGAGTCAAGTGTTTTTAAGACCTTGCTTGGAAACTaGGTGCAAAGGTCTGTGTCCCTCAGGATGAGTGGA +
Preference number: 6 (lower is better)
Translates to: TESSVFKTLLGN*VQRSVSLRMSG
Trigger: TCCACTCATCCTGAGGGACACAGACCTTTGCACCCAGTTTCCAAGCAAGGTCTTAAAAACACTTGACTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465224.5
CDS CAA 72 bp CAGAGAAGAGCAACTGAGTCAAGTGTTTTTAAGACCTaGCTTGGAAACTGGGTGCAAAGGTCTGTGTCCCTC +
Preference number: 6 (lower is better)
Translates to: QRRATESSVFKT*LGNWVQRSVSL
Trigger: GAGGGACACAGACCTTTGCACCCAGTTTCCAAGCAAGGTCTTAAAAACACTTGACTCAGTTGCTCTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465224.5