RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNNM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000148842

Ensembl transcript IDs: ENST00000369875.3, ENST00000369878.9, ENST00000433628.2, ENST00000475511.1

Found 912 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGCGAGATCGACGGTGATGCCCACTGGGGCACAGAGGAAGGGTaGCCCTCGCTGGGAGGGCCAAGGAAGGCTACCGGAGGGGCAAGT +
Preference number: 1 (lower is better)
Translates to: ASEIDGDAHWGTEEG*PSLGGPRKATGGAS
Trigger: ACTTGCCCCTCCGGTAGCCTTCCTTGGCCCTCCCAGCGAGGGGCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTCGATCTCGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 90 bp GTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATaGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCT +
Preference number: 1 (lower is better)
Translates to: VAGYSMADKLTPVKS*ADRAGPSGLGGCGP
Trigger: AGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 90 bp CTCAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTaGAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGT +
Preference number: 1 (lower is better)
Translates to: LRMLQGTAWRTSSHQ*SHGQTGPGPRDWAG
Trigger: ACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR GCA 90 bp GAGGAAATACTGAGCCGGGCATGCACAACACCCGAGGCACCAAACTaGTCACCAGGCAGCCAGCCCGGCCCGCTGCTGTCTGCTCCTCAG +
Preference number: 1 (lower is better)
Translates to: EEILSRACTTPEAPN*SPGSQPGPLLSAPQ
Trigger: CTGAGGAGCAGACAGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTGCATGCCCGGCTCAGTATTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp CACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCACTaGGGCACAGAGGAAGGGTGCCCCTCGCTGGGAGGGCCAAGGAAG +
Preference number: 1 (lower is better)
Translates to: HGLLHSASEIDGDAH*GTEEGCPSLGGPRK
Trigger: CTTCCTTGGCCCTCCCAGCGAGGGGCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 90 bp CGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGAGGGCTGGCTaGCAGACCCCAGGCTGGAATGACAGGATGAAGTCAACTTGCCTC +
Preference number: 1 (lower is better)
Translates to: RHSVSLGAGSGRRAG*QTPGWNDRMKSTCL
Trigger: GAGGCAAGTTGACTTCATCCTGTCATTCCAGCCTGGGGTCTGCCAGCCAGCCCTCCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 90 bp TCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTaGTGCCCACTGGGGCACAGAGGAAGGGTGCCCCTCGCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: SAVTRSSSFSQRDRR*CPLGHRGRVPLAGR
Trigger: CCTCCCAGCGAGGGGCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR GCA 90 bp AGACACTCCAGGACTGGCATCCCAGAGGAAATACTGAGCCGGGCATaGACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: RHSRTGIPEEILSRA*TTPEAPNCSPGSQP
Trigger: GGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTGCATGCCCGGCTCAGTATTTCCTCTGGGATGCCAGTCCTGGAGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp AGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTaGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTT +
Preference number: 1 (lower is better)
Translates to: RELGSCYIACKASPP*PALAWSPREQGEHL
Trigger: AAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCCAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp AACCTTACAGCATGTACTGACAGGTCCCCTAGCCTCCCCAGCAGTTaGTCAGTGGTACAGCAGACCCAGGCCCTGCTGGGTTTCCTTGGG +
Preference number: 1 (lower is better)
Translates to: NLTACTDRSPSLPSS*SVVQQTQALLGFLG
Trigger: CCCAAGGAAACCCAGCAGGGCCTGGGTCTGCTGTACCACTGACCAACTGCTGGGGAGGCTAGGGGACCTGTCAGTACATGCTGTAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp TCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGTCTCAGGATGTTaGAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATG +
Preference number: 1 (lower is better)
Translates to: SAAPGKGTRSLVSGC*RVQHGGQAHTSEVM
Trigger: CATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTGAGACCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR GCA 90 bp CTAGCCTCCCCAGCAGTTGGTCAGTGGTACAGCAGACCCAGGCCCTaGTGGGTTTCCTTGGGCAGAGGAATTGCCCAGTACATTCATTCA +
Preference number: 1 (lower is better)
Translates to: LASPAVGQWYSRPRP*WVSLGRGIAQYIHS
Trigger: TGAATGAATGTACTGGGCAATTCCTCTGCCCAAGGAAACCCAGCAGGGCCTGGGTCTGCTGTACCACTGACCAACTGCTGGGGAGGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp ATCTCTCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTaGGAAGGGCACAAGGTCTTTGGTCTCAGGATGTTGCAGGGTACA +
Preference number: 1 (lower is better)
Translates to: ISRFHSSLTVLLRGS*EGHKVFGLRMLQGT
Trigger: TGTACCCTGCAACATCCTGAGACCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 90 bp TGGAAGAAACCATTATCACTGTGGGGCCAGGCAAGTGACCTGCCTTaGGAGGAGGGAGGCCGTGGACTCACAGCTGTACTGTACCCTACA +
Preference number: 1 (lower is better)
Translates to: WKKPLSLWGQASDLP*EEGGRGLTAVLYPT
Trigger: TGTAGGGTACAGTACAGCTGTGAGTCCACGGCCTCCCTCCTCCCAAGGCAGGTCACTTGCCTGGCCCCACAGTGATAATGGTTTCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp GCCTCCCCAGCAGTTGGTCAGTGGTACAGCAGACCCAGGCCCTGCTaGGTTTCCTTGGGCAGAGGAATTGCCCAGTACATTCATTCATCT +
Preference number: 1 (lower is better)
Translates to: ASPAVGQWYSRPRPC*VSLGRGIAQYIHSS
Trigger: AGATGAATGAATGTACTGGGCAATTCCTCTGCCCAAGGAAACCCAGCAGGGCCTGGGTCTGCTGTACCACTGACCAACTGCTGGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp CTGAGGCAGGCTACACCCCACAGTGATGACAGACTTGGCAGGTTCTaGAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTG +
Preference number: 1 (lower is better)
Translates to: LRQATPHSDDRLGRF*SNTVFFIQPARSTV
Trigger: CACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAACCTGCCAAGTCTGTCATCACTGTGGGGTGTAGCCTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 90 bp CTAGGCAAGGCGAGGATGGCTACAGATCCCCGGCTGGCCTTCAGATaGCAGAGGTGGTTGTGTGTTTTTACTAGGCAGGACACAGACTTG +
Preference number: 1 (lower is better)
Translates to: LGKARMATDPRLAFR*QRWLCVFTRQDTDL
Trigger: CAAGTCTGTGTCCTGCCTAGTAAAAACACACAACCACCTCTGTCATCTGAAGGCCAGCCGGGGATCTGTAGCCATCCTCGCCTTGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp ATCGAGACCGCAGCTATTCCACGGTCTTTCTCTGCCGGACCCCACTaGCTTTGTAGAGATGAATGGCAGAGGCCTTCCAAGCCAAAGTCA +
Preference number: 1 (lower is better)
Translates to: IETAAIPRSFSAGPH*LCRDEWQRPSKPKS
Trigger: TGACTTTGGCTTGGAAGGCCTCTGCCATTCATCTCTACAAAGCCAGTGGGGTCCGGCAGAGAAAGACCGTGGAATAGCTGCGGTCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp TGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTTGCTGTGAACTaGCATCTCTTCTTCGCATCCGTAGGGTTGACCAGGGACTCTAGA +
Preference number: 1 (lower is better)
Translates to: WWEESCSLLYAVAVN*HLFFASVGLTRDSR
Trigger: TCTAGAGTCCCTGGTCAACCCTACGGATGCGAAGAAGAGATGGCAGTTCACAGCAACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp ACACTCAGGCCGGATGTTTTCCACTTGAAAGTGACTATCCATGCCTaGTCCGACCTTCCTCCCAGGCTTAGCATAGCAGAGGAGGACCTA +
Preference number: 1 (lower is better)
Translates to: TLRPDVFHLKVTIHA*SDLPPRLSIAEEDL
Trigger: TAGGTCCTCCTCTGCTATGCTAAGCCTGGGAGGAAGGTCGGAGCAGGCATGGATAGTCACTTTCAAGTGGAAAACATCCGGCCTGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp GGGGAAGAGAGCCTGTCACCAAGAAACCACCTTGGAAATATTTCATaGAGGTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCT +
Preference number: 1 (lower is better)
Translates to: GEESLSPRNHLGNIS*RYLRGPAHKVGDLP
Trigger: AGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTACCTCCATGAAATATTTCCAAGGTGGTTTCTTGGTGACAGGCTCTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp CCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTaGATACAATGGCATGGTTGGTGTTGCACAGATGAAAGGGAAGAG +
Preference number: 1 (lower is better)
Translates to: PAKPGKWVGQLVQPS*IQWHGWCCTDEREE
Trigger: CTCTTCCCTTTCATCTGTGCAACACCAACCATGCCATTGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp CCCGAAGAGGGGGATAGATGCCCTCTTCCAGCATGGGCTACGCTTTaGTTTGTTGCAAGGACCCCTCATCTTTATACACTCATCACACTG +
Preference number: 1 (lower is better)
Translates to: PEEGDRCPLPAWATL*FVARTPHLYTLITL
Trigger: CAGTGTGATGAGTGTATAAAGATGAGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCTGGAAGAGGGCATCTATCCCCCTCTTCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp AGAGATGAATGGCAGAGGCCTTCCAAGCCAAAGTCATTCTCCTGCTaGCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTG +
Preference number: 1 (lower is better)
Translates to: RDEWQRPSKPKSFSC*PKEATAQCFSSNHL
Trigger: CAGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAATGACTTTGGCTTGGAAGGCCTCTGCCATTCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp GGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATaGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCAA +
Preference number: 1 (lower is better)
Translates to: GRLPEGQVQPIRVTS*DHSRVQTEQLKTLQ
Trigger: TTGCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 90 bp AAGCCCTGTGGAAGATTTCCATTTGGCATCTGTGTAGCAGCATCTTaGGTTAACAAGAGCAAGGACCAGGGAGGTGGGCGACGACACTCT +
Preference number: 1 (lower is better)
Translates to: KPCGRFPFGICVAAS*VNKSKDQGGGRRHS
Trigger: AGAGTGTCGTCGCCCACCTCCCTGGTCCTTGCTCTTGTTAACCCAAGATGCTGCTACACAGATGCCAAATGGAAATCTTCCACAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 90 bp TGTTTCTCCTCCAACCATCTGAGAGGTTGGTTTCCTGAGGGAAAATaGGGCCTGGAGGAGGAATCTGGCCGCTCAGACATGAGTGTTGTT +
Preference number: 1 (lower is better)
Translates to: CFSSNHLRGWFPEGK*GLEEESGRSDMSVV
Trigger: AACAACACTCATGTCTGAGCGGCCAGATTCCTCCTCCAGGCCCCATTTTCCCTCAGGAAACCAACCTCTCAGATGGTTGGAGGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp GATGTCAGTAGCTCTAGCATACAGAGAGAACGTGCTTACTTGAGCTaGGCCAACCACAGTGGTGTGAGAAGCAAAGAAGGTCCCCAGCCT +
Preference number: 1 (lower is better)
Translates to: DVSSSSIQRERAYLS*ANHSGVRSKEGPQP
Trigger: AGGCTGGGGACCTTCTTTGCTTCTCACACCACTGTGGTTGGCTCAGCTCAAGTAAGCACGTTCTCTCTGTATGCTAGAGCTACTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp ATAGGCATTGTAGAACACCAGGCAACCCCTTCTTGGTTGCTAGACTaGACTCCCAACCTTACAGCATGTACTGACAGGTCCCCTAGCCTC +
Preference number: 1 (lower is better)
Translates to: IGIVEHQATPSWLLD*TPNLTACTDRSPSL
Trigger: GAGGCTAGGGGACCTGTCAGTACATGCTGTAAGGTTGGGAGTTCAGTCTAGCAACCAAGAAGGGGTTGCCTGGTGTTCTACAATGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp TGTAGAGATGAATGGCAGAGGCCTTCCAAGCCAAAGTCATTCTCCTaGTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCAT +
Preference number: 1 (lower is better)
Translates to: CRDEWQRPSKPKSFS*CPKEATAQCFSSNH
Trigger: ATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAATGACTTTGGCTTGGAAGGCCTCTGCCATTCATCTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp GTGGATCAGATGCCGGAAGGCGTCCTTCCAAGCGAGGCAAGACAATaGTCCCATTCTTCTCATTTGTTCACGGTCCCAATGGGCATTAAA +
Preference number: 1 (lower is better)
Translates to: VDQMPEGVLPSEARQ*SHSSHLFTVPMGIK
Trigger: TTTAATGCCCATTGGGACCGTGAACAAATGAGAAGAATGGGAGCATTGTCTTGCCTCGCTTGGAAGGACGCCTTCCGGCATCTGATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp CCAAATCTGGCCCCCAAAGAACTGCATCCTAAAAGTGAATCCATGTaGATCAGATGCCGGAAGGCGTCCTTCCAAGCGAGGCAAGACAAT +
Preference number: 1 (lower is better)
Translates to: PNLAPKELHPKSESM*IRCRKASFQARQDN
Trigger: ATTGTCTTGCCTCGCTTGGAAGGACGCCTTCCGGCATCTGATCCACATGGATTCACTTTTAGGATGCAGTTCTTTGGGGGCCAGATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp GCATTTCACTGGGCTAAGATACACCTCATTCTACTTTCAGGTAGTTaGGCGATACCTGGGGAGATGGGAGCGGTAGTTAGGTCAGGCAGT +
Preference number: 1 (lower is better)
Translates to: AFHWAKIHLILLSGS*AIPGEMGAVVRSGS
Trigger: ACTGCCTGACCTAACTACCGCTCCCATCTCCCCAGGTATCGCCCAACTACCTGAAAGTAGAATGAGGTGTATCTTAGCCCAGTGAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp GATGACAGAGGTGGTTGTGTGTTTTTACTAGGCAGGACACAGACTTaGTCAGCCAGGGCCTATACAGGTCTGCTCCTCAACCCAAAGAGA +
Preference number: 1 (lower is better)
Translates to: DDRGGCVFLLGRTQT*SARAYTGLLLNPKR
Trigger: TCTCTTTGGGTTGAGGAGCAGACCTGTATAGGCCCTGGCTGATCAAGTCTGTGTCCTGCCTAGTAAAAACACACAACCACCTCTGTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp AAATGCCGGCTTAGCCCAGCGGCACTGTGTGTTGTTATTAGTGACTaGGCAGCCAATGTCTGGGGCAATTTGACTGGATACTCCGAATGT +
Preference number: 1 (lower is better)
Translates to: KCRLSPAALCVVISD*AANVWGNLTGYSEC
Trigger: ACATTCGGAGTATCCAGTCAAATTGCCCCAGACATTGGCTGCTCAGTCACTAATAACAACACACAGTGCCGCTGGGCTAAGCCGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp TGTACCCTACATAGGGGAAGAGAGCCTGTCACCAAGAAACCACCTTaGAAATATTTCATGGAGGTACTTGAGAGGCCCTGCCCACAAGGT +
Preference number: 1 (lower is better)
Translates to: CTLHRGREPVTKKPP*KYFMEVLERPCPQG
Trigger: ACCTTGTGGGCAGGGCCTCTCAAGTACCTCCATGAAATATTTCCAAGGTGGTTTCTTGGTGACAGGCTCTCTTCCCCTATGTAGGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp GATCACAGAGGGTCCCTGAAGCTCCACCGTAAGTTCTTCAGGGACTaGTCTCATGTGAGTGATGAGGGTAAGAAGGAACAGAAGACAAAG +
Preference number: 1 (lower is better)
Translates to: DHRGSLKLHRKFFRD*SHVSDEGKKEQKTK
Trigger: CTTTGTCTTCTGTTCCTTCTTACCCTCATCACTCACATGAGACCAGTCCCTGAAGAACTTACGGTGGAGCTTCAGGGACCCTCTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp CCCCAGACTCAGTTCTTTAGGATTTATAAAGGAACAGCAGAGCTCTaGAAAGGGCACCAACACACTAGCTCTGATTCCAGAGGCTCTCCC +
Preference number: 1 (lower is better)
Translates to: PQTQFFRIYKGTAEL*KGHQHTSSDSRGSP
Trigger: GGGAGAGCCTCTGGAATCAGAGCTAGTGTGTTGGTGCCCTTTTCAGAGCTCTGCTGTTCCTTTATAAATCCTAAAGAACTGAGTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp TGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTaGCTTGGAGGCACAGAACTAGTACCCACTTCTCTTAAGACTTTA +
Preference number: 1 (lower is better)
Translates to: CKEGHLPPRIGCTRL*LGGTELVPTSLKTL
Trigger: TAAAGTCTTAAGAGAAGTGGGTACTAGTTCTGTGCCTCCAAGTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp GCACATCAGTGGATTTCAAAGACACTGACTACAAGCGGCACCAGCTaGCACGGTCAATTAGTGAGATTAAACCTCCCAACCTCTTCCCAC +
Preference number: 1 (lower is better)
Translates to: AHQWISKTLTTSGTS*HGQLVRLNLPTSSH
Trigger: GTGGGAAGAGGTTGGGAGGTTTAATCTCACTAATTGACCGTGTCAGCTGGTGCCGCTTGTAGTCAGTGTCTTTGAAATCCACTGATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp AAGAAACCACCTTGGAAATATTTCATGGAGGTACTTGAGAGGCCCTaGCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAAACACT +
Preference number: 1 (lower is better)
Translates to: KKPPWKYFMEVLERP*PQGRRPASILIQNT
Trigger: AGTGTTTTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTACCTCCATGAAATATTTCCAAGGTGGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp TCATCCTCAGTGACTCTGGCAAGGCTGCTTCTCTATCACTGGCTTTaGACAGAAGTATGCTCTACTTGCGTTGCTTTAGGGCAGGATTCT +
Preference number: 1 (lower is better)
Translates to: SSSVTLARLLLYHWL*TEVCSTCVALGQDS
Trigger: AGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCTTGCCAGAGTCACTGAGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp AGTTTCCTCAGTAAGGAAGTAAGCAATGGCACCTCAGAGGCCTTCTaGACCCTAACCTACCAGCTCAGTCTTGTATTTCTCCTCAACCCT +
Preference number: 1 (lower is better)
Translates to: SFLSKEVSNGTSEAF*TLTYQLSLVFLLNP
Trigger: AGGGTTGAGGAGAAATACAAGACTGAGCTGGTAGGTTAGGGTCCAGAAGGCCTCTGAGGTGCCATTGCTTACTTCCTTACTGAGGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp TTCACAGTAGATTCAGACTTGGGGAGTAATGATCAGAAGCGAGGCTaGGGCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCA +
Preference number: 1 (lower is better)
Translates to: FTVDSDLGSNDQKRG*GSLGNENPKTSFFP
Trigger: TGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGCCCCAGCCTCGCTTCTGATCATTACTCCCCAAGTCTGAATCTACTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp CAGAGCAAAATGGTGCCTCTCTGTATATTATTCTTAAGAGTGTGCTaGGAAGTCAATGGTCCATGGGTAGGCAGGGCAGCTGTAACTGGG +
Preference number: 1 (lower is better)
Translates to: QSKMVPLCILFLRVC*EVNGPWVGRAAVTG
Trigger: CCCAGTTACAGCTGCCCTGCCTACCCATGGACCATTGACTTCCCAGCACACTCTTAAGAATAATATACAGAGAGGCACCATTTTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp ACCCAGAGCAAAATGGTGCCTCTCTGTATATTATTCTTAAGAGTGTaGTGGGAAGTCAATGGTCCATGGGTAGGCAGGGCAGCTGTAACT +
Preference number: 1 (lower is better)
Translates to: TQSKMVPLCILFLRV*WEVNGPWVGRAAVT
Trigger: AGTTACAGCTGCCCTGCCTACCCATGGACCATTGACTTCCCAGCACACTCTTAAGAATAATATACAGAGAGGCACCATTTTGCTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp CATGTGTTGGCCTCCTGTTTGAACACTGCACAGTCACTAATACCCTaGCAGGAAAAGCACTTCAGAAGTCGGGCAACTAATTCTCCCTTA +
Preference number: 1 (lower is better)
Translates to: HVLASCLNTAQSLIP*QEKHFRSRATNSPL
Trigger: TAAGGGAGAATTAGTTGCCCGACTTCTGAAGTGCTTTTCCTGTCAGGGTATTAGTGACTGTGCAGTGTTCAAACAGGAGGCCAACACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp TTCCCACGAAAGGCAGCAATAGTCCTTCCACGTCTCACAAGTTCTTaGGATACTTGGAAAGAAGATTTGCCAAGCAAACCTTCCCCACAC +
Preference number: 1 (lower is better)
Translates to: FPRKAAIVLPRLTSS*DTWKEDLPSKPSPH
Trigger: GTGTGGGGAAGGTTTGCTTGGCAAATCTTCTTTCCAAGTATCTCAAGAACTTGTGAGACGTGGAAGGACTATTGCTGCCTTTCGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp ACTCTGGCAAGGCTGCTTCTCTATCACTGGCTTTGCACAGAAGTATaGTCTACTTGCGTTGCTTTAGGGCAGGATTCTATTTTGAGGGAA +
Preference number: 1 (lower is better)
Translates to: TLARLLLYHWLCTEV*STCVALGQDSILRE
Trigger: TTCCCTCAAAATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCTTGCCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp TTTAATTCATCCTCAGTGACTCTGGCAAGGCTGCTTCTCTATCACTaGCTTTGCACAGAAGTATGCTCTACTTGCGTTGCTTTAGGGCAG +
Preference number: 1 (lower is better)
Translates to: FNSSSVTLARLLLYH*LCTEVCSTCVALGQ
Trigger: CTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCTTGCCAGAGTCACTGAGGATGAATTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp ATGATACACAACTTTTGGGAGGCCCTGAGAGTGAAATCTCTACCATaGAGCTACCAGAGCAACCCTGCAGATAGAAGAAAAACATGCACT +
Preference number: 1 (lower is better)
Translates to: MIHNFWEALRVKSLP*SYQSNPADRRKTCT
Trigger: AGTGCATGTTTTTCTTCTATCTGCAGGGTTGCTCTGGTAGCTCCATGGTAGAGATTTCACTCTCAGGGCCTCCCAAAAGTTGTGTATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp AGGCTGCTTCTCTATCACTGGCTTTGCACAGAAGTATGCTCTACTTaGGTTGCTTTAGGGCAGGATTCTATTTTGAGGGAAAAGACAGTA +
Preference number: 1 (lower is better)
Translates to: RLLLYHWLCTEVCST*VALGQDSILREKTV
Trigger: TACTGTCTTTTCCCTCAAAATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp CCCAGATCACTTTCCTATTCAAACCCCTATATCCCTACTAAATTCTaGGTTAACCTACAACTCACCCAGATACCCTTGATGGACAGAAGC +
Preference number: 1 (lower is better)
Translates to: PRSLSYSNPYIPTKF*VNLQLTQIPLMDRS
Trigger: GCTTCTGTCCATCAAGGGTATCTGGGTGAGTTGTAGGTTAACCCAGAATTTAGTAGGGATATAGGGGTTTGAATAGGAAAGTGATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp GAAAACTTCACTGCTCAAATGCATGACCTGTACACTATGATACAGTaGATAAAGGCTGAGGAGGATCAAAGTCAGACACAAAGCAGGGTC +
Preference number: 1 (lower is better)
Translates to: ENFTAQMHDLYTMIQ*IKAEEDQSQTQSRV
Trigger: GACCCTGCTTTGTGTCTGACTTTGATCCTCCTCAGCCTTTATTCACTGTATCATAGTGTACAGGTCATGCATTTGAGCAGTGAAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp CAAACCTTCCCCACACTGAAAAATGTTTACTCAGTGTCCAGTCTTTaGGAGAGTGTTCTCACCAGAGTTATCTTTGACTTGAGTGTGTGG +
Preference number: 1 (lower is better)
Translates to: QTFPTLKNVYSVSSL*ESVLTRVIFDLSVW
Trigger: CCACACACTCAAGTCAAAGATAACTCTGGTGAGAACACTCTCTCAAAGACTGGACACTGAGTAAACATTTTTCAGTGTGGGGAAGGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp ACTGATAATCTTGTGTGTACACTGGTCAGTATGATTTCATTTCAGTaGATGAATAGCGCCAACAACCTGCACATATCCCTCGGGCTAACA +
Preference number: 1 (lower is better)
Translates to: TDNLVCTLVSMISFQ*MNSANNLHISLGLT
Trigger: TGTTAGCCCGAGGGATATGTGCAGGTTGTTGGCGCTATTCATGCACTGAAATGAAATCATACTGACCAGTGTACACACAAGATTATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp GCTTCTCTATCACTGGCTTTGCACAGAAGTATGCTCTACTTGCGTTaGTTTAGGGCAGGATTCTATTTTGAGGGAAAAGACAGTATCCTT +
Preference number: 1 (lower is better)
Translates to: ASLSLALHRSMLYLR*FRAGFYFEGKDSIL
Trigger: AAGGATACTGTCTTTTCCCTCAAAATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp CTCAGTGTCCAGTCTTTGAGAGAGTGTTCTCACCAGAGTTATCTTTaGCTTGAGTGTGTGGGTATCTTTAAACAAGTCACTTTTTGGACC +
Preference number: 1 (lower is better)
Translates to: LSVQSLRECSHQSYL*LECVGIFKQVTFWT
Trigger: GGTCCAAAAAGTGACTTGTTTAAAGATACCCACACACTCAAGTCAAAGATAACTCTGGTGAGAACACTCTCTCAAAGACTGGACACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp TCCTTCCACGTCTCACAAGTTCTTGAGATACTTGGAAAGAAGATTTaGCAAGCAAACCTTCCCCACACTGAAAAATGTTTACTCAGTGTC +
Preference number: 1 (lower is better)
Translates to: SFHVSQVLEILGKKI*QANLPHTEKCLLSV
Trigger: GACACTGAGTAAACATTTTTCAGTGTGGGGAAGGTTTGCTTGGCAAATCTTCTTTCCAAGTATCTCAAGAACTTGTGAGACGTGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp AGGCAAGACAATGCTCCCATTCTTCTCATTTGTTCACGGTCCCAATaGGCATTAAAACCTGAAAACCTTGTGTACTCAAGTCTTTCTTAC +
Preference number: 1 (lower is better)
Translates to: RQDNAPILLICSRSQ*ALKPENLVYSSLSY
Trigger: GTAAGAAAGACTTGAGTACACAAGGTTTTCAGGTTTTAATGCCCATTGGGACCGTGAACAAATGAGAAGAATGGGAGCATTGTCTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp GGCAATTTGACTGGATACTCCGAATGTTCTTATGTAGAGAGTAACTaGTGGAGAACAGATTATAATCCTTGCAAAGAAGGACACCTTCCC +
Preference number: 1 (lower is better)
Translates to: GNLTGYSECSYVESN*WRTDYNPCKEGHLP
Trigger: GGGAAGGTGTCCTTCTTTGCAAGGATTATAATCTGTTCTCCATCAGTTACTCTCTACATAAGAACATTCGGAGTATCCAGTCAAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 90 bp TCCTCAACCCAAAGAGAGAATTTGAGGGCAGAAGTTCATGGTACCTaGTTAGCTCAAATTCCTATTGCTCTATTTCCTAGGGAAAATGTA +
Preference number: 1 (lower is better)
Translates to: SSTQRENLRAEVHGT*LAQIPIALFPRENV
Trigger: TACATTTTCCCTAGGAAATAGAGCAATAGGAATTTGAGCTAAGCAGGTACCATGAACTTCTGCCCTCAAATTCTCTCTTTGGGTTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp AGACTGCAAATGCCACGGTTAAATAAATTCAGTGGAGACTATAAATaGACCAGTCAAGAGGCTAAATTTTCAGAGCACGATCCTCTTTGG +
Preference number: 1 (lower is better)
Translates to: RLQMPRLNKFSGDYK*TSQEAKFSEHDPLW
Trigger: CCAAAGAGGATCGTGCTCTGAAAATTTAGCCTCTTGACTGGTCCATTTATAGTCTCCACTGAATTTATTTAACCGTGGCATTTGCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 90 bp CTCTGTATATTATTCTTAAGAGTGTGCTGGGAAGTCAATGGTCCATaGGTAGGCAGGGCAGCTGTAACTGGGCTTTTTAAAACAAATTAT +
Preference number: 1 (lower is better)
Translates to: LCILFLRVCWEVNGP*VGRAAVTGLFKTNY
Trigger: ATAATTTGTTTTAAAAAGCCCAGTTACAGCTGCCCTGCCTACCCATGGACCATTGACTTCCCAGCACACTCTTAAGAATAATATACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 90 bp CCCTGTCCTCACACACAATGTCTTCATCCCAAGGCCACAACAGTCTaGTTCATTCCAACAAAGGTATGTGATCTCAAAAATAAAATATAT +
Preference number: 1 (lower is better)
Translates to: PCPHTQCLHPKATTV*FIPTKVCDLKNKIY
Trigger: ATATATTTTATTTTTGAGATCACATACCTTTGTTGGAATGAATCAGACTGTTGTGGCCTTGGGATGAAGACATTGTGTGTGAGGACAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGACACCAGTGAAGTCATaGGCAGACAGGGCCGGGCCC +
Preference number: 2 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRTPVKS*ADRAGP
Trigger: GGGCCCGGCCCTGTCTGCCCATGACTTCACTGGTGT...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR GCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGCAGAACTCAGGGGTCTaGATCTGGTCCACTCGACCC +
Preference number: 2 (lower is better)
Translates to: VPARVSHLPRITPGEPQGQNSGV*IWSTRP
Trigger: GGGTCGAGTGGACCAGATGCAGACCCCTGAGTTCTG...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGGACCCCAGGCTGGAATaGCAGGATGAAGTCAACTTG +
Preference number: 2 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRDPRLE*QDEVNL
Trigger: CAAGTTGACTTCATCCTGTCATTCCAGCCTGGGGTC...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CAA 90 bp CCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTaGGTCTCAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCAC +
Preference number: 2 (lower is better)
Translates to: PSLSSSAAPGKGTRS*VSGCCRVQHGGQAH
Trigger: GTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTGAGACCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR GCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGACGCCATGCCCCGGCTaGCAACTTCACATCTCTCGT +
Preference number: 2 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWTPCPG*QLHISR
Trigger: ACGAGAGATGTGAAGTTGGCAGCCGGGGCATGGCGT...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR GCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACAGGGGACACAGCCACTaGCGGGCCCCATGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDRGHSH*RAPWAQ
Trigger: CTGGGCCCATGGGGCCCGGCAGTGGCTGTGTCCCCT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAATGTGAGCTTAGGCGCTaGGTCGGGGAGGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: VLERPCPQGRRPASILIQCELRR*VGEEGW
Trigger: CCAGCCCTCCTCCCCGACCCAGCGCCTAAGCTCACA...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGACGCCATGCCCCGGCTaGCAACTTCACATCTCTCGT +
Preference number: 2 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQTPCPG*QLHISR
Trigger: ACGAGAGATGTGAAGTTGGCAGCCGGGGCATGGCGT...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGGTTTCAGAGGAACCGTaGGGCACCAGTGGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQVSEEP*GTSGCS
Trigger: TGAGCAGCCACTGGTGCCCCACGGTTCCTCTGAAAC...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp CCCACCTGCACACGCCTCGCCACACTCAGGCCGGATGTTTTCCACTaGAAAGTGACTATCCATGCCTGCTCCGACCTTCCTCCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: PTCTRLATLRPDVFH*KVTIHACSDLPPRL
Trigger: AAGCCTGGGAGGAAGGTCGGAGCAGGCATGGATAGTCACTTTCAAGTGGAAAACATCCGGCCTGAGTGTGGCGAGGCGTGTGCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTCCCACGGGGGCAGGTTaGGTGCCAGTAGCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSPTGAG*VPVAGH
Trigger: GTGGCCTGCTACTGGCACGCAACCTGCCCCCGTGGG...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACAAGGGAAGGCCAGCACTaGGCAGACCCGAAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTREGQH*ADPKRG
Trigger: CCCCCTCTTCGGGTCTGCGCAGTGCTGGCCTTCCCT...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACAGGGAGGAGGGACAGTTaGCTCCCTGGGAGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTGRRDS*LPGRRS
Trigger: GCTCCTCCTCCCAGGGAGCCAACTGTCCCTCCTCCC...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGAAGGGTGCCCCTCGCTaGGAGGGCCAAGGAAGGCTA +
Preference number: 2 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSKGAPR*EGQGRL
Trigger: TAGCCTTCCTTGGCCCTCCCAGCGAGGGGCACCCTT...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR CCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGAACAGACTTCCTACCTaGAGTAGGGAGAAGAAAACT +
Preference number: 2 (lower is better)
Translates to: VPARVSHLPRITPGEPQGNRLPT*SREKKT
Trigger: AGTTTTCTTCTCCCTACTCCAGGTAGGAAGTCTGTT...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTGGGCCTATACAGGTCTaGTCCTCAACCCAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSGPIQV*SSTQRE
Trigger: CTCTCTTTGGGTTGAGGAGCAGACCTGTATAGGCCC...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACACCGAGAGACTGTGTGTaGAGAAGCAGACGTGAGCCC +
Preference number: 2 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTPRDCV*RSRREP
Trigger: GGGCTCACGTCTGCTTCTCCACACACAGTCTCTCGG...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAACAGCAGCAAGCTATTaGTGCACCACTCACCCCTCA +
Preference number: 2 (lower is better)
Translates to: VLERPCPQGRRPASILIQTAASY*CTTHPS
Trigger: TGAGGGGTGAGTGGTGCACCAATAGCTTGCTGCTGT...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTCATCTCCAAAATCTTaGACGCCATGCCCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSSSPKS*TPCPGC
Trigger: GCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGA...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR CCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAACACCAGTGAAGTCATaGGCAGACAGGGCCGGGCCC +
Preference number: 2 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLTPVKS*ADRAGP
Trigger: GGGCCCGGCCCTGTCTGCCCATGACTTCACTGGTGT...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR CCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTGACGGTGATGCCCACTaGGGCACAGAGGAAGGGTGC +
Preference number: 2 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSDGDAH*GTEEGC
Trigger: GCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTC...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACACCTGGAGGAGGAATCTaGCCGCTCAGACATGAGTGT +
Preference number: 2 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTPGGGI*PLRHEC
Trigger: ACACTCATGTCTGAGCGGCCAGATTCCTCCTCCAGG...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGGAGGGCAGAAGTTCATaGTACCTGCTTAGCTCAAAT +
Preference number: 2 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLEGRSS*YLLSSN
Trigger: ATTTGAGCTAAGCAGGTACCATGAACTTCTGCCCTC...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGGGAAGGGGAGGAGCTTaGACTCCACATCACGTGTTT +
Preference number: 2 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSGRGGA*TPHHVF
Trigger: AAACACGTGATGTGGAGTGCAAGCTCCTCCCCTTCC...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR GCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAACCAAAGTCATTCTCCTaGTGCCCCAAAGAAGCAACA +
Preference number: 2 (lower is better)
Translates to: VLERPCPQGRRPASILIQPKSFS*CPKEAT
Trigger: TGTTGCTTCTTTGGGGCAGCAGGAGAATGACTTTGG...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp ATGGGGCCTGGAGGAGGAATCTGGCCGCTCAGACATGAGTGTTGTTaGAAGGGTCCTAAGCTCTCCCCAAAGGAGATGTTAGCCTTCATT +
Preference number: 2 (lower is better)
Translates to: MGPGGGIWPLRHECC*KGPKLSPKEMLAFI
Trigger: AATGAAGGCTAACATCTCCTTTGGGGAGAGCTTAGGACCCTTCAAACAACACTCATGTCTGAGCGGCCAGATTCCTCCTCCAGGCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp GAAAGCTTGCAAGTGCTAGAGGAGGAAGGCCTACTTGTCACAGCCTaGCTAAGTAACAGCAGCAAGCTATTGGTGCACCACTCACCCCTC +
Preference number: 2 (lower is better)
Translates to: ESLQVLEEEGLLVTA*LSNSSKLLVHHSPL
Trigger: GAGGGGTGAGTGGTGCACCAATAGCTTGCTGCTGTTACTTAGCAAGGCTGTGACAAGTAGGCCTTCCTCCTCTAGCACTTGCAAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp AGCCTGTCACCAAGAAACCACCTTGGAAATATTTCATGGAGGTACTaGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCA +
Preference number: 2 (lower is better)
Translates to: SLSPRNHLGNISWRY*RGPAHKVGDLPPSS
Trigger: TGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTACCTCCATGAAATATTTCCAAGGTGGTTTCTTGGTGACAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGATTTGCACTGTTCCTTaGAGTCACATTAGAAGATGG +
Preference number: 2 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLICTVP*SHIRRW
Trigger: CCATCTTCTAATGTGACTTCAAGGAACAGTGCAAAT...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGAGGATGAAGTCAACTTaGCTCTTGCCAATGATAAAC +
Preference number: 2 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQRMKST*LLPMIN
Trigger: GTTTATCATTGGCAAGAGGCAAGTTGACTTCATCCT...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTTTGCAGGGTACAGCATaGCGGACAAGCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: SIWAESVHLQNLERHAPALQGTA*RTSSHQ
Trigger: CTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAA...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR CCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGTCAGAGGCAGCAGCTaGCATCCCCTCTCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPVRGSS*HPLSSP
Trigger: GGGAGAGGAGAGGGGATGCCAGCTGCTGCCTCTGAC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp GAAGGCCTACTTGTCACAGCCTTGCTAAGTAACAGCAGCAAGCTATaGGTGCACCACTCACCCCTCAAACGGAGGCAAATGAACCTCAAC +
Preference number: 2 (lower is better)
Translates to: EGLLVTALLSNSSKL*VHHSPLKRRQMNLN
Trigger: GTTGAGGTTCATTTGCCTCCGTTTGAGGGGTGAGTGGTGCACCAATAGCTTGCTGCTGTTACTTAGCAAGGCTGTGACAAGTAGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAACAAGCTCACACCAGTaGAGTCATGGGCAGACAGGG +
Preference number: 2 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLTSSHQ*SHGQTG
Trigger: CCCTGTCTGCCCATGACTTCACTGGTGTGAGCTTGT...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR TCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTATCATCTCCAAAATCTTaGACGCCATGCCCCGGCTGC +
Preference number: 2 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLSSPKS*TPCPGC
Trigger: GCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGA...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCACAGCCCAGCCGTGGCTaGACAGACTTCCTACCTGGA +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPQPSRG*TDFLPG
Trigger: TCCAGGTAGGAAGTCTGTTCAGCCACGGCTGGGCTG...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTTCATGCTACATAGCGTaGAAAGCCAGCCCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: ALWGMRILRPHSSQLCSASCYIA*KASPPW
Trigger: CCAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGA...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTAGGGCACAAGGTCTTTaGTCTCAGGATGTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFRAQGL*SQDVAG
Trigger: CCCTGCAACATCCTGAGACCAAAGACCTTGTGCCCT...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR CCA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACAATCAGGGTCACATCATaGGATCACAGCAGAGTTCAG +
Preference number: 2 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTIRVTS*DHSRVQ
Trigger: CTGAACTCTGCTGTGATCCCATGATGTGACCCTGAT...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTCCACTCCCTCCCACTTaGGGATGCCAACCACTTCAA +
Preference number: 2 (lower is better)
Translates to: ALWGMRILRPHSSQLCSAPLPPT*GCQPLQ
Trigger: TTGAAGTGGTTGGCATCCCCAAGTGGGAGGGAGTGG...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp AGGGGGATAGATGCCCTCTTCCAGCATGGGCTACGCTTTGCTTTGTaGCAAGGACCCCTCATCTTTATACACTCATCACACTGGTGTTGT +
Preference number: 2 (lower is better)
Translates to: RGIDALFQHGLRFAL*QGPLIFIHSSHWCC
Trigger: ACAACACCAGTGTGATGAGTGTATAAAGATGAGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCTGGAAGAGGGCATCTATCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp AAGAGGGGGATAGATGCCCTCTTCCAGCATGGGCTACGCTTTGCTTaGTTGCAAGGACCCCTCATCTTTATACACTCATCACACTGGTGT +
Preference number: 2 (lower is better)
Translates to: KRGIDALFQHGLRFA*LQGPLIFIHSSHWC
Trigger: ACACCAGTGTGATGAGTGTATAAAGATGAGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCTGGAAGAGGGCATCTATCCCCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTGCATGGGCTACGCTTTaGTTTGTTGCAAGGACCCCT +
Preference number: 2 (lower is better)
Translates to: ALWGMRILRPHSSQLCSAAWATL*FVARTP
Trigger: AGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGC...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATAGGGCACAAGGTCTTTaGTCTCAGGATGTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: NQFISKILNAMPRLPTSHRAQGL*SQDVAG
Trigger: CCCTGCAACATCCTGAGACCAAAGACCTTGTGCCCT...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CAA 90 bp TTCATCCTCAGTGACTCTGGCAAGGCTGCTTCTCTATCACTGGCTTaGCACAGAAGTATGCTCTACTTGCGTTGCTTTAGGGCAGGATTC +
Preference number: 2 (lower is better)
Translates to: FILSDSGKAASLSLA*HRSMLYLRCFRAGF
Trigger: GAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCTTGCCAGAGTCACTGAGGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAACAAGCTCACACCAGTaGAGTCATGGGCAGACAGGG +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPTSSHQ*SHGQTG
Trigger: CCCTGTCTGCCCATGACTTCACTGGTGTGAGCTTGT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTTTTCATTTCAGTGCATaGATAGCGCCAACAACCTGC +
Preference number: 2 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSFHFSA*IAPTTC
Trigger: GCAGGTTGTTGGCGCTATTCATGCACTGAAATGAAA...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTTCACCCAGATACCCTTaGTGGACAGAAGCACCACTA +
Preference number: 2 (lower is better)
Translates to: ALWGMRILRPHSSQLCSASPRYP*WTEAPL
Trigger: TAGTGGTGCTTCTGTCCATCAAGGGTATCTGGGTGA...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACAGAACCTTTGTTTCCATaGTGCTTGAAGTTCAACCTG +
Preference number: 2 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTEPLFP*CLKFNL
Trigger: CAGGTTGAACTTCAAGCATCATGGAAACAAAGGTTC...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTCTGAGCCAACCACAGTaGTGTGAGAAGCAAAGAAGG +
Preference number: 2 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSLSQPQ*CEKQRR
Trigger: CCTTCTTTGCTTCTCACACCACTGTGGTTGGCTCAG...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp CAGCCAGGGCCTATACAGGTCTGCTCCTCAACCCAAAGAGAGAATTaGAGGGCAGAAGTTCATGGTACCTGCTTAGCTCAAATTCCTATT +
Preference number: 2 (lower is better)
Translates to: QPGPIQVCSSTQREN*RAEVHGTCLAQIPI
Trigger: AATAGGAATTTGAGCTAAGCAGGTACCATGAACTTCTGCCCTCAAATTCTCTCTTTGGGTTGAGGAGCAGACCTGTATAGGCCCTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAAGGGAGCTTGGGTCATaGTACATAGCGTGCAAAGCC +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPRELGS*YIACKA
Trigger: GGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAAATCCACTGAGAAGTTaGTCATTGATACATCAGAAA +
Preference number: 2 (lower is better)
Translates to: VLERPCPQGRRPASILIQNPLRS*SLIHQK
Trigger: TTTCTGATGTATCAATGAGCAACTTCTCAGTGGATT...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTTGTGTAGCAGCATCTTaGGTTAACAAGAGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFCVAAS*VNKSKD
Trigger: GTCCTTGCTCTTGTTAACCCAAGATGCTGCTACACA...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR CCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGGTCAAGCTACGCGGTaGGGCTTCATCCCACGGGGG +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFGQATR*GFIPRG
Trigger: CCCCCGTGGGATGAAGCCCCACCGCGTAGCTTGACC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp ATCCCTACTAAATTCTGGGTTAACCTACAACTCACCCAGATACCCTaGATGGACAGAAGCACCACTAGCCTAGAGCCCAGAATGGAACTA +
Preference number: 2 (lower is better)
Translates to: IPTKFWVNLQLTQIP*MDRSTTSLEPRMEL
Trigger: TAGTTCCATTCTGGGCTCTAGGCTAGTGGTGCTTCTGTCCATCAAGGGTATCTGGGTGAGTTGTAGGTTAACCCAGAATTTAGTAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAAGGTCAGGCAGTGTCTaGAAGCCAATTCTGTCAGCA +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPRSGSV*KPILSA
Trigger: TGCTGACAGAATTGGCTTTCAGACACTGCCTGACCT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp ATAAACATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTaGAACGCCATGCCCCGGCTGCCAACTTCACATCTCTCGTTTCCA +
Preference number: 2 (lower is better)
Translates to: INMILFGRNQFISKI*NAMPRLPTSHLSFP
Trigger: TGGAAACGAGAGATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCATGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCATCTATGCAGTTGCTGTaGACTGCCATCTCTTCTTCG +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPSMQLL*TAISSS
Trigger: CGAAGAAGAGATGGCAGTTCACAGCAACTGCATAGA...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGCTAAGGAGCAGGGATaGCCACAGGCACAGGCAACC +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFAKEQG*PQAQAT
Trigger: GGTTGCCTGTGCCTGTGGTCATCCCTGCTCCTTAGC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTACAATTTTCAACTTCATaGAAATCGAGGGCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLQFSTS*KSRAEE
Trigger: CTCCTCTGCCCTCGATTTGCATGAAGTTGAAAATTG...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR CCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGATCAGGGTCACATCATaGGATCACAGCAGAGTTCAG +
Preference number: 2 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKIRVTS*DHSRVQ
Trigger: CTGAACTCTGCTGTGATCCCATGATGTGACCCTGAT...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CAA 90 bp AAGGCTGCTTCTCTATCACTGGCTTTGCACAGAAGTATGCTCTACTaGCGTTGCTTTAGGGCAGGATTCTATTTTGAGGGAAAAGACAGT +
Preference number: 2 (lower is better)
Translates to: KAASLSLALHRSMLY*RCFRAGFYFEGKDS
Trigger: ACTGTCTTTTCCCTCAAAATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAACAGTGAATAAAGGCTaGGGAGGATCAAAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPTVNKG*GGSKSD
Trigger: GTCTGACTTTGATCCTCCTCAGCCTTTATTCACTGT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAATGTCTGGGGCAATTTaGCTGGATACTCCGAATGTT +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPMSGAI*LDTPNV
Trigger: AACATTCGGAGTATCCAGTCAAATTGCCCCAGACAT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTGAAGTTCATGGTACCTaGTTAGCTCAAATTCCTATT +
Preference number: 2 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSEVHGT*LAQIPI
Trigger: AATAGGAATTTGAGCTAAGCAGGTACCATGAACTTC...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCCCCACCAGGCCCATTaGATAGTTCTCTTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFPHQAH*IVLFRV
Trigger: CACCCTGAAGAGAACTATCCAATGGGCCTGGTGGGG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 90 bp GCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTaGCCAATGTCTGTGATGTTGAAAGAAAGAATGCTTCTTATTGTC +
Preference number: 2 (lower is better)
Translates to: ANCHPFLSLCIDILE*PMSVMLKERMLLIV
Trigger: GACAATAAGAAGCATTCTTTCTTTCAACATCACAGACATTGGCAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
3UTR CAA 90 bp AAAGGCAGCAATAGTCCTTCCACGTCTCACAAGTTCTTGAGATACTaGGAAAGAAGATTTGCCAAGCAAACCTTCCCCACACTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: KGSNSPSTSHKFLRY*ERRFAKQTFPTLKN
Trigger: ATTTTTCAGTGTGGGGAAGGTTTGCTTGGCAAATCTTCTTTCCAAGTATCTCAAGAACTTGTGAGACGTGGAAGGACTATTGCTGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTTCTCCTCCAACCATCTaGGAGGTTGGTTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFSPPTI*EVGFLR
Trigger: CCTCAGGAAACCAACCTCTCAGATGGTTGGAGGAGA...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGCAGCAAGCTATTGGTaGACCACTCACCCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFAASYW*TTHPSN
Trigger: GTTTGAGGGGTGAGTGGTGCACCAATAGCTTGCTGC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGACTGAAAAAGCCCTGTaGAAGATTTCCATTTGGCAT +
Preference number: 2 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKTEKAL*KISIWH
Trigger: ATGCCAAATGGAAATCTTCCACAGGGCTTTTTCAGT...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGCTGGAATGACAGGATaGAGTCAACTTGCCTCTTGC +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFAGMTG*SQLASC
Trigger: GCAAGAGGCAAGTTGACTTCATCCTGTCATTCCAGC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGGAGTAGACAAGGCCTaGGATAAACCTTCCCACACA +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFGVDKA*DKPSHT
Trigger: TGTGTGGGAAGGTTTATCTCAGGCCTTGTCTACTCC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCACACAATGATGAATTTTaGATCTCGTCCCTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPHNDEF*ISSLCF
Trigger: GAAACAAAGGGACGAGATTCAAAATTCATCATTGTG...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCTTGGAAAGAAGATTTaGCAAGCAAACCTTCCCCAC +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFLGKKI*QANLPH
Trigger: GTGGGGAAGGTTTGCTTGGCAAATCTTCTTTCCAAG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTACATCACGTGTTTACTaGAAAAGCCCTGTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFTSRVY*KSPVED
Trigger: ATCTTCCACAGGGCTTTTTCAGTAAACACGTGATGT...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCACTGCTCAAATGCATaGCCTGTACACTATGATACA +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFHCSNA*PVHYDT
Trigger: TGTATCATAGTGTACAGGTCATGCATTTGAGCAGTG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCTGACCTCAAGTCAATaGCTTAGTAGAACTGCAGTA +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFLTSSQ*LSRTAV
Trigger: TACTGCAGTTCTACTAAGTCATTGACTTGAGGTCAG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATACTGAAAAAGCCCTGTaGAAGATTTCCATTTGGCAT +
Preference number: 2 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHTEKAL*KISIWH
Trigger: ATGCCAAATGGAAATCTTCCACAGGGCTTTTTCAGT...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTAAAAATTCCTTAGGGTaGGAGCAAAATCACATTCCC +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFKNSLG*EQNHIP
Trigger: GGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTT...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR GCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTATTAGTGTGAAGCTCTaGATTCAACATTTGCACTGT +
Preference number: 2 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFISVKL*IQHLHC
Trigger: ACAGTGCAAATGTTGAATGCAGAGCTTCACACTAAT...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp AGCTACGCGGTGGGGCTTCATCCCACGGGGGCAGGTTaGGTGCCAGTAGCAGGCCACTCAGCACCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: SYAVGLHPTGAG*VPVAGHSAPSG
Trigger: CCCCGAGGGTGCTGAGTGGCCTGCTACTGGCACGCAACCTGCCCCCGTGGGATGAAGCCCCACCGCGTAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp ATCGACGGTGATGCCCACTGGGGCACAGAGGAAGGGTaGCCCTCGCTGGGAGGGCCAAGGAAGGCTACCGGA +
Preference number: 3 (lower is better)
Translates to: IDGDAHWGTEEG*PSLGGPRKATG
Trigger: TCCGGTAGCCTTCCTTGGCCCTCCCAGCGAGGGGCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 72 bp TACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATaGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGG +
Preference number: 3 (lower is better)
Translates to: YSMADKLTPVKS*ADRAGPSGLGG
Trigger: CCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 72 bp CTTCATTCAGCCAGCGAGATCGACGGTGATGCCCACTaGGGCACAGAGGAAGGGTGCCCCTCGCTGGGAGGG +
Preference number: 3 (lower is better)
Translates to: LHSASEIDGDAH*GTEEGCPSLGG
Trigger: CCCTCCCAGCGAGGGGCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTCGATCTCGCTGGCTGAATGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR GCA 72 bp AAAGGTCACCGCCGCGGGAGGGCAGTCCAGCGGAGGTaGCAAAGAGCAGCCACATCGAGACCGCAGCTATTC +
Preference number: 3 (lower is better)
Translates to: KGHRRGRAVQRR*QRAATSRPQLF
Trigger: GAATAGCTGCGGTCTCGATGTGGCTGCTCTTTGGCACCTCCGCTGGACTGCCCTCCCGCGGCGGTGACCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp GCATGTACTGACAGGTCCCCTAGCCTCCCCAGCAGTTaGTCAGTGGTACAGCAGACCCAGGCCCTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: ACTDRSPSLPSS*SVVQQTQALLG
Trigger: ACCCAGCAGGGCCTGGGTCTGCTGTACCACTGACCAACTGCTGGGGAGGCTAGGGGACCTGTCAGTACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp ACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTaGTGCCCACTGGGGCACAGAGGAAGGGTGCCCCTC +
Preference number: 3 (lower is better)
Translates to: TRSSSFSQRDRR*CPLGHRGRVPL
Trigger: GAGGGGCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 72 bp GCTCTGTCCCACCCAGAGAGGCCCCGTAAAGGAGGGTaGGGCCTCCCATCAGTATCCAGAACTCAGGGGTCT +
Preference number: 3 (lower is better)
Translates to: ALSHPERPRKGG*GLPSVSRTQGS
Trigger: AGACCCCTGAGTTCTGGATACTGATGGGAGGCCTCACCCTCCTTTACGGGGCCTCTCTGGGTGGGACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp GAGAACAAGGTGAGCACCTTCCTGTGCCAGCCCGGGTaGGTCATCTGCCTAGGATCACCCCTGGGGAACCAC +
Preference number: 3 (lower is better)
Translates to: ENKVSTFLCQPG*VICLGSPLGNH
Trigger: GTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCACAGGAAGGTGCTCACCTTGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp CCATTATCACTGTGGGGCCAGGCAAGTGACCTGCCTTaGGAGGAGGGAGGCCGTGGACTCACAGCTGTACTG +
Preference number: 3 (lower is better)
Translates to: PLSLWGQASDLP*EEGGRGLTAVL
Trigger: CAGTACAGCTGTGAGTCCACGGCCTCCCTCCTCCCAAGGCAGGTCACTTGCCTGGCCCCACAGTGATAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGACAGTGATGACAGACTaGGCAGGTTCTGCAGTAACA +
Preference number: 3 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRTVMTD*AGSAVT
Trigger: TGTTACTGCAGAACCTGCCAAGTCTGTCATCACTGT...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR GCA 72 bp AGGACTGGCATCCCAGAGGAAATACTGAGCCGGGCATaGACAACACCCGAGGCACCAAACTGCTCACCAGGC +
Preference number: 3 (lower is better)
Translates to: RTGIPEEILSRA*TTPEAPNCSPG
Trigger: GCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTGCATGCCCGGCTCAGTATTTCCTCTGGGATGCCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp GGGAGTTTTTCCCATGCCACCAGGGAGCTTGGGTCATaGTACATAGCGTGCAAAGCCAGCCCTCCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: GSFSHATRELGS*YIACKASPPWP
Trigger: AGGCCAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCATGGGAAAAACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp GGGACACGGCACCTTCTGAGGAAGACACTCCAGGACTaGCATCCCAGAGGAAATACTGAGCCGGGCATGCAC +
Preference number: 3 (lower is better)
Translates to: GTRHLLRKTLQD*HPRGNTEPGMH
Trigger: GTGCATGCCCGGCTCAGTATTTCCTCTGGGATGCCAGTCCTGGAGTGTCTTCCTCAGAAGGTGCCGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp GGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTaGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGT +
Preference number: 3 (lower is better)
Translates to: GSCYIACKASPP*PALAWSPREQG
Trigger: ACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCCAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGGGCCACAACACACATTaGGTTTCTGAATCCCTGTTT +
Preference number: 3 (lower is better)
Translates to: VPARVSHLPRITPGEPQGGHNTH*VSESLF
Trigger: AAACAGGGATTCAGAAACCAAATGTGTGTTGTGGCC...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp CCTGGGAAGGGCACAAGGTCTTTGGTCTCAGGATGTTaGAGGGTACAGCATGGCGGACAAGCTCACACCAGT +
Preference number: 3 (lower is better)
Translates to: PGKGTRSLVSGC*RVQHGGQAHTS
Trigger: ACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTGAGACCAAAGACCTTGTGCCCTTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 72 bp GCAGTTGGTCAGTGGTACAGCAGACCCAGGCCCTGCTaGGTTTCCTTGGGCAGAGGAATTGCCCAGTACATT +
Preference number: 3 (lower is better)
Translates to: AVGQWYSRPRPC*VSLGRGIAQYI
Trigger: AATGTACTGGGCAATTCCTCTGCCCAAGGAAACCCAGCAGGGCCTGGGTCTGCTGTACCACTGACCAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACAGGGAAGGGGAGGAGCTaGCACTCCACATCACGTGTT +
Preference number: 3 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTGKGRS*HSTSRV
Trigger: AACACGTGATGTGGAGTGCAAGCTCCTCCCCTTCCC...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACAGCCCCACCAGGCCCATaGGATAGTTCTCTTCAGGGT +
Preference number: 3 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTAPPGP*DSSLQG
Trigger: ACCCTGAAGAGAACTATCCAATGGGCCTGGTGGGGC...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp CCAAAGCCATGTCTGGCGAGGGGAGTAGACAAGGCCTaGGATAAACCTTCCCACACAAACTGGAGCCCAAGC +
Preference number: 3 (lower is better)
Translates to: PKPCLARGVDKA*DKPSHTNWSPS
Trigger: GCTTGGGCTCCAGTTTGTGTGGGAAGGTTTATCTCAGGCCTTGTCTACTCCCCTCGCCAGACATGGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp AGACCCGAAGAGGGGGATAGATGCCCTCTTCCAGCATaGGCTACGCTTTGCTTTGTTGCAAGGACCCCTCAT +
Preference number: 3 (lower is better)
Translates to: RPEEGDRCPLPA*ATLCFVARTPH
Trigger: ATGAGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCTGGAAGAGGGCATCTATCCCCCTCTTCGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp GCAGCTATTCCACGGTCTTTCTCTGCCGGACCCCACTaGCTTTGTAGAGATGAATGGCAGAGGCCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: AAIPRSFSAGPH*LCRDEWQRPSK
Trigger: CTTGGAAGGCCTCTGCCATTCATCTCTACAAAGCCAGTGGGGTCCGGCAGAGAAAGACCGTGGAATAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAATCCCACGGGGGCAGGTaGCGTGCCAGTAGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: YYRTCISVGYIAVAHATQSHGGR*RASSRP
Trigger: TGGCCTGCTACTGGCACGCAACCTGCCCCCGTGGGA...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACAGCATGGGCTACGCTTaGCTTTGTTGCAAGGACCCC +
Preference number: 3 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDSMGYA*LCCKDP
Trigger: GGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp GGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTaGCTTGGAGGCACAGAACTAGTACCCACTTCTCTT +
Preference number: 3 (lower is better)
Translates to: GHLPPRIGCTRL*LGGTELVPTSL
Trigger: AAGAGAAGTGGGTACTAGTTCTGTGCCTCCAAGTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp ATACACACCGATTACTGGGGAATGCAGGATATCCACTaGATCCTGAAGACCCACCTGCACACGCCTCGCCAC +
Preference number: 3 (lower is better)
Translates to: IHTDYWGMQDIH*ILKTHLHTPRH
Trigger: GTGGCGAGGCGTGTGCAGGTGGGTCTTCAGGATTCAGTGGATATCCTGCATTCCCCAGTAATCGGTGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp AAGAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTaGTCCCTACTCTATGCAGTTGCTGTGAACTGCCAT +
Preference number: 3 (lower is better)
Translates to: KKVPSLGWWEES*SLLYAVAVNCH
Trigger: ATGGCAGTTCACAGCAACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACAAAGGGCACAAGGTCTTaGGTCTCAGGATGTTGCAGG +
Preference number: 3 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTKGTRS*VSGCCR
Trigger: CCTGCAACATCCTGAGACCAAAGACCTTGTGCCCTT...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCTTCATCTCCAAAATCTaGAACGCCATGCCCCGGCTG +
Preference number: 3 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPFISKI*NAMPRL
Trigger: CAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAA...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR-3UTR CAA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGCAGGATGAAGTCAACTaGCCTCTTGCCAATGATAAA +
Preference number: 3 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLQDEVN*PLANDK
Trigger: TTTATCATTGGCAAGAGGCAAGTTGACTTCATCCTG...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACCTCATCACACTGGTGTaGTGCTCAGTGAGAGGCATC +
Preference number: 3 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDLITLV*CSVRGI
Trigger: GATGCCTCTCACTGAGCACAACACCAGTGTGATGAG...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTCACTCCCTTCCACACTaGAAAAGGTCACCGCCGCGG +
Preference number: 3 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSHSLPH*KRSPPR
Trigger: CCGCGGCGGTGACCTTTTCAAGTGTGGAAGGGAGTG...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp GAAAGCTGCTCCCTACTCTATGCAGTTGCTGTGAACTaGCATCTCTTCTTCGCATCCGTAGGGTTGACCAGG +
Preference number: 3 (lower is better)
Translates to: ESCSLLYAVAVN*HLFFASVGLTR
Trigger: CCTGGTCAACCCTACGGATGCGAAGAAGAGATGGCAGTTCACAGCAACTGCATAGAGTAGGGAGCAGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp CCGGATGTTTTCCACTTGAAAGTGACTATCCATGCCTaGTCCGACCTTCCTCCCAGGCTTAGCATAGCAGAG +
Preference number: 3 (lower is better)
Translates to: PDVFHLKVTIHA*SDLPPRLSIAE
Trigger: CTCTGCTATGCTAAGCCTGGGAGGAAGGTCGGAGCAGGCATGGATAGTCACTTTCAAGTGGAAAACATCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp CCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATaGGATCACAGCAGAGTTCAGACAGAACAACTTAAA +
Preference number: 3 (lower is better)
Translates to: PEGQVQPIRVTS*DHSRVQTEQLK
Trigger: TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CCA 72 bp GGGTCCCTGAAGCTCCACCGTAAGTTCTTCAGGGACTaGTCTCATGTGAGTGATGAGGGTAAGAAGGAACAG +
Preference number: 3 (lower is better)
Translates to: GSLKLHRKFFRD*SHVSDEGKKEQ
Trigger: CTGTTCCTTCTTACCCTCATCACTCACATGAGACCAGTCCCTGAAGAACTTACGGTGGAGCTTCAGGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTCTAAAATTTCATCCTTaGGGAGCCTCACTGATGCCA +
Preference number: 3 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSLKFHP*GASLMP
Trigger: TGGCATCAGTGAGGCTCCCAAAGGATGAAATTTTAG...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTGGGAAGGGGAGGAGCTaGCACTCCACATCACGTGTT +
Preference number: 3 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSGKGRS*HSTSRV
Trigger: AACACGTGATGTGGAGTGCAAGCTCCTCCCCTTCCC...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 72 bp GGTGGTTGTGTGTTTTTACTAGGCAGGACACAGACTTaGTCAGCCAGGGCCTATACAGGTCTGCTCCTCAAC +
Preference number: 3 (lower is better)
Translates to: GGCVFLLGRTQT*SARAYTGLLLN
Trigger: GTTGAGGAGCAGACCTGTATAGGCCCTGGCTGATCAAGTCTGTGTCCTGCCTAGTAAAAACACACAACCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp GGAGGATCAAAGTCAGACACAAAGCAGGGTCTTACTTaGGGGCCAAGGCAATGTTGGCACTGGGCCTCAAAA +
Preference number: 3 (lower is better)
Translates to: GGSKSDTKQGLT*GPRQCWHWASK
Trigger: TTTTGAGGCCCAGTGCCAACATTGCCTTGGCCCTCAAGTAAGACCCTGCTTTGTGTCTGACTTTGATCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp CCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTaGATACAATGGCATGGTTGGTGTTGCACAGATGAA +
Preference number: 3 (lower is better)
Translates to: PGKWVGQLVQPS*IQWHGWCCTDE
Trigger: TTCATCTGTGCAACACCAACCATGCCATTGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp GTAGAACACCAGGCAACCCCTTCTTGGTTGCTAGACTaGACTCCCAACCTTACAGCATGTACTGACAGGTCC +
Preference number: 3 (lower is better)
Translates to: VEHQATPSWLLD*TPNLTACTDRS
Trigger: GGACCTGTCAGTACATGCTGTAAGGTTGGGAGTTCAGTCTAGCAACCAAGAAGGGGTTGCCTGGTGTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp GGGGATAGATGCCCTCTTCCAGCATGGGCTACGCTTTaGTTTGTTGCAAGGACCCCTCATCTTTATACACTC +
Preference number: 3 (lower is better)
Translates to: GDRCPLPAWATL*FVARTPHLYTL
Trigger: GAGTGTATAAAGATGAGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCTGGAAGAGGGCATCTATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp GGACACAGACTTGATCAGCCAGGGCCTATACAGGTCTaGTCCTCAACCCAAAGAGAGAATTTGAGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: GHRLDQPGPIQV*SSTQRENLRAE
Trigger: TTCTGCCCTCAAATTCTCTCTTTGGGTTGAGGAGCAGACCTGTATAGGCCCTGGCTGATCAAGTCTGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp GATTCAGACTTGGGGAGTAATGATCAGAAGCGAGGCTaGGGCTCTCTGGGGAATGAGAATCCTAAGACCTCA +
Preference number: 3 (lower is better)
Translates to: DSDLGSNDQKRG*GSLGNENPKTS
Trigger: TGAGGTCTTAGGATTCTCATTCCCCAGAGAGCCCCAGCCTCGCTTCTGATCATTACTCCCCAAGTCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp TGGGCTAAGATACACCTCATTCTACTTTCAGGTAGTTaGGCGATACCTGGGGAGATGGGAGCGGTAGTTAGG +
Preference number: 3 (lower is better)
Translates to: WAKIHLILLSGS*AIPGEMGAVVR
Trigger: CCTAACTACCGCTCCCATCTCCCCAGGTATCGCCCAACTACCTGAAAGTAGAATGAGGTGTATCTTAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTATTCATCTCCAAAATCTaGAACGCCATGCCCCGGCTG +
Preference number: 3 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLFISKI*NAMPRL
Trigger: CAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAA...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 72 bp CTTAGCCCAGCGGCACTGTGTGTTGTTATTAGTGACTaGGCAGCCAATGTCTGGGGCAATTTGACTGGATAC +
Preference number: 3 (lower is better)
Translates to: LSPAALCVVISD*AANVWGNLTGY
Trigger: GTATCCAGTCAAATTGCCCCAGACATTGGCTGCTCAGTCACTAATAACAACACACAGTGCCGCTGGGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp AGCCTGTCACCAAGAAACCACCTTGGAAATATTTCATaGAGGTACTTGAGAGGCCCTGCCCACAAGGTAGGA +
Preference number: 3 (lower is better)
Translates to: SLSPRNHLGNIS*RYLRGPAHKVG
Trigger: TCCTACCTTGTGGGCAGGGCCTCTCAAGTACCTCCATGAAATATTTCCAAGGTGGTTTCTTGGTGACAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp CATAGGGGAAGAGAGCCTGTCACCAAGAAACCACCTTaGAAATATTTCATGGAGGTACTTGAGAGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: HRGREPVTKKPP*KYFMEVLERPC
Trigger: GCAGGGCCTCTCAAGTACCTCCATGAAATATTTCCAAGGTGGTTTCTTGGTGACAGGCTCTCTTCCCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp TCCTCAGTGACTCTGGCAAGGCTGCTTCTCTATCACTaGCTTTGCACAGAAGTATGCTCTACTTGCGTTGCT +
Preference number: 3 (lower is better)
Translates to: SSVTLARLLLYH*LCTEVCSTCVA
Trigger: AGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCTTGCCAGAGTCACTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTAAGGGCACAAGGTCTTaGGTCTCAGGATGTTGCAGG +
Preference number: 3 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSKGTRS*VSGCCR
Trigger: CCTGCAACATCCTGAGACCAAAGACCTTGTGCCCTT...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 72 bp TTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTaGACGCCATGCCCCGGCTGCCAACTTCACATCTCT +
Preference number: 3 (lower is better)
Translates to: FYLGGISSSPKS*TPCPGCQLHIS
Trigger: AGAGATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 72 bp GATAAACCTTCCCACACAAACTGGAGCCCAAGCAGCTaGGCACACATTTTTCCCACGAAAGGCAGCAATAGT +
Preference number: 3 (lower is better)
Translates to: DKPSHTNWSPSS*AHIFPTKGSNS
Trigger: ACTATTGCTGCCTTTCGTGGGAAAAATGTGTGCTCAGCTGCTTGGGCTCCAGTTTGTGTGGGAAGGTTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp ATGCCCTCTTCCAGCATGGGCTACGCTTTGCTTTGTTaGAAGGACCCCTCATCTTTATACACTCATCACACT +
Preference number: 3 (lower is better)
Translates to: MPSSSMGYALLC*KDPSSLYTHHT
Trigger: AGTGTGATGAGTGTATAAAGATGAGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCTGGAAGAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp AGTAAGGAAGTAAGCAATGGCACCTCAGAGGCCTTCTaGACCCTAACCTACCAGCTCAGTCTTGTATTTCTC +
Preference number: 3 (lower is better)
Translates to: SKEVSNGTSEAF*TLTYQLSLVFL
Trigger: GAGAAATACAAGACTGAGCTGGTAGGTTAGGGTCCAGAAGGCCTCTGAGGTGCCATTGCTTACTTCCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp TTATTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGATAGACATCCTAGAGTaGCCAATGTCTGTGATGTTG +
Preference number: 3 (lower is better)
Translates to: LLETGFHHGGQTVSLELLIDILE*PMSVML
Trigger: CAACATCACAGACATTGGCAACTCTAGGATGTCTAT...CAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
3UTR TCA 72 bp AAGGGGAGGAGCTTGCACTCCACATCACGTGTTTACTaGAAAAGCCCTGTGGAAGATTTCCATTTGGCATCT +
Preference number: 3 (lower is better)
Translates to: KGRSLHSTSRVY*KSPVEDFHLAS
Trigger: AGATGCCAAATGGAAATCTTCCACAGGGCTTTTTCAGTAAACACGTGATGTGGAGTGCAAGCTCCTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 72 bp AAGAAGGTAGCAAAAGGGAAATGGGCAAGTAAACCGTaGTCGCAGACAGAAAGCTTGCAAGTGCTAGAGGAG +
Preference number: 3 (lower is better)
Translates to: KKVAKGKWASKP*SQTESLQVLEE
Trigger: CTCCTCTAGCACTTGCAAGCTTTCTGTCTGCGATCACGGTTTACTTGCCCATTTCCCTTTTGCTACCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp TGGATTTCAAAGACACTGACTACAAGCGGCACCAGCTaGCACGGTCAATTAGTGAGATTAAACCTCCCAACC +
Preference number: 3 (lower is better)
Translates to: WISKTLTTSGTS*HGQLVRLNLPT
Trigger: GGTTGGGAGGTTTAATCTCACTAATTGACCGTGTCAGCTGGTGCCGCTTGTAGTCAGTGTCTTTGAAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp CTGTTAAAGTATGTTCTAGTGGGAAGGGGAGGAGCTTaGACTCCACATCACGTGTTTACTGAAAAAGCCCTG +
Preference number: 3 (lower is better)
Translates to: LLKYVLVGRGGA*TPHHVFTEKAL
Trigger: CAGGGCTTTTTCAGTAAACACGTGATGTGGAGTGCAAGCTCCTCCCCTTCCCACTAGAACATACTTTAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR TCA 72 bp CATCCTTGTTTTCAAGAGCCAATTGAGAGGCCTGAATaGGACCTTTGGTCTTACCTAGGAAATGCCGGCTTA +
Preference number: 3 (lower is better)
Translates to: HPCFQEPIERPE*DLWSYLGNAGL
Trigger: TAAGCCGGCATTTCCTAGGTAAGACCAAAGGTCTCATTCAGGCCTCTCAATTGGCTCTTGAAAACAAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp CCTACCAGCTCAGTCTTGTATTTCTCCTCAACCCTTTaGAAAGAAAAGCCCATATCTGGGCTCAAAAGCAGA +
Preference number: 3 (lower is better)
Translates to: PTSSVLYFSSTL*KEKPISGLKSR
Trigger: TCTGCTTTTGAGCCCAGATATGGGCTTTTCTTTGCAAAGGGTTGAGGAGAAATACAAGACTGAGCTGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp AAAATGGTGCCTCTCTGTATATTATTCTTAAGAGTGTaGTGGGAAGTCAATGGTCCATGGGTAGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: KMVPLCILFLRV*WEVNGPWVGRA
Trigger: TGCCCTGCCTACCCATGGACCATTGACTTCCCAGCACACTCTTAAGAATAATATACAGAGAGGCACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp AGGCTGCTTCTCTATCACTGGCTTTGCACAGAAGTATaGTCTACTTGCGTTGCTTTAGGGCAGGATTCTATT +
Preference number: 3 (lower is better)
Translates to: RLLLYHWLCTEV*STCVALGQDSI
Trigger: AATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp TTATTCTTAAGAGTGTGCTGGGAAGTCAATGGTCCATaGGTAGGCAGGGCAGCTGTAACTGGGCTTTTTAAA +
Preference number: 3 (lower is better)
Translates to: LFLRVCWEVNGP*VGRAAVTGLFK
Trigger: TTTAAAAAGCCCAGTTACAGCTGCCCTGCCTACCCATGGACCATTGACTTCCCAGCACACTCTTAAGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp ATGGCAAATGATTCTCTGGGTCCAAAGATCGGAAAGTaGAAAGCACACAGCTGGAATAAGCAACAACTCCAC +
Preference number: 3 (lower is better)
Translates to: MANDSLGPKIGK*KAHSWNKQQLH
Trigger: GTGGAGTTGTTGCTTATTCCAGCTGTGTGCTTTTCACTTTCCGATCTTTGGACCCAGAGAATCATTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp CTTGTGTGTACACTGGTCAGTATGATTTCATTTCAGTaGATGAATAGCGCCAACAACCTGCACATATCCCTC +
Preference number: 3 (lower is better)
Translates to: LVCTLVSMISFQ*MNSANNLHISL
Trigger: GAGGGATATGTGCAGGTTGTTGGCGCTATTCATGCACTGAAATGAAATCATACTGACCAGTGTACACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp TCACTGGCTTTGCACAGAAGTATGCTCTACTTGCGTTaGTTTAGGGCAGGATTCTATTTTGAGGGAAAAGAC +
Preference number: 3 (lower is better)
Translates to: SLALHRSMLYLR*FRAGFYFEGKD
Trigger: GTCTTTTCCCTCAAAATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp CTCTATCACTGGCTTTGCACAGAAGTATGCTCTACTTaGGTTGCTTTAGGGCAGGATTCTATTTTGAGGGAA +
Preference number: 3 (lower is better)
Translates to: LYHWLCTEVCST*VALGQDSILRE
Trigger: TTCCCTCAAAATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCATTGTCCTGGGACTGCTaGAAAATAAGAGCACAGATA +
Preference number: 3 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPLSWDC*KIRAQI
Trigger: TATCTGTGCTCTTATTTTCAAGCAGTCCCAGGACAA...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp AAGGCAGCAATAGTCCTTCCACGTCTCACAAGTTCTTaGGATACTTGGAAAGAAGATTTGCCAAGCAAACCT +
Preference number: 3 (lower is better)
Translates to: KAAIVLPRLTSS*DTWKEDLPSKP
Trigger: AGGTTTGCTTGGCAAATCTTCTTTCCAAGTATCTCAAGAACTTGTGAGACGTGGAAGGACTATTGCTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp AATTTCCTATCATGTGTTGGCCTCCTGTTTGAACACTaGACAGTCACTAATACCCTGACAGGAAAAGCACTT +
Preference number: 3 (lower is better)
Translates to: NFLSCVGLLFEH*TVTNTLTGKAL
Trigger: AAGTGCTTTTCCTGTCAGGGTATTAGTGACTGTGCAGTGTTCAAACAGGAGGCCAACACATGATAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp AGAAAGGGAAGAACTGCCTTCTTATACTACAGAACATaGATTAGTGTGGGCTATATAGCTGTGGCTCATGCT +
Preference number: 3 (lower is better)
Translates to: RKGRTAFLYYRT*ISVGYIAVAHA
Trigger: AGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTATAAGAAGGCAGTTCTTCCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp CCCACACTGAAAAATGTTTACTCAGTGTCCAGTCTTTaGGAGAGTGTTCTCACCAGAGTTATCTTTGACTTG +
Preference number: 3 (lower is better)
Translates to: PTLKNVYSVSSL*ESVLTRVIFDL
Trigger: CAAGTCAAAGATAACTCTGGTGAGAACACTCTCTCAAAGACTGGACACTGAGTAAACATTTTTCAGTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp CAAAGAGAGAATTTGAGGGCAGAAGTTCATGGTACCTaGTTAGCTCAAATTCCTATTGCTCTATTTCCTAGG +
Preference number: 3 (lower is better)
Translates to: QRENLRAEVHGT*LAQIPIALFPR
Trigger: CCTAGGAAATAGAGCAATAGGAATTTGAGCTAAGCAGGTACCATGAACTTCTGCCCTCAAATTCTCTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp CTCAACCCAAAGAGAGAATTTGAGGGCAGAAGTTCATaGTACCTGCTTAGCTCAAATTCCTATTGCTCTATT +
Preference number: 3 (lower is better)
Translates to: LNPKREFEGRSS*YLLSSNSYCSI
Trigger: AATAGAGCAATAGGAATTTGAGCTAAGCAGGTACCATGAACTTCTGCCCTCAAATTCTCTCTTTGGGTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp CTTTCCTATTCAAACCCCTATATCCCTACTAAATTCTaGGTTAACCTACAACTCACCCAGATACCCTTGATG +
Preference number: 3 (lower is better)
Translates to: LSYSNPYIPTKF*VNLQLTQIPLM
Trigger: CATCAAGGGTATCTGGGTGAGTTGTAGGTTAACCCAGAATTTAGTAGGGATATAGGGGTTTGAATAGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp AATGCTCCCATTCTTCTCATTTGTTCACGGTCCCAATaGGCATTAAAACCTGAAAACCTTGTGTACTCAAGT +
Preference number: 3 (lower is better)
Translates to: NAPILLICSRSQ*ALKPENLVYSS
Trigger: ACTTGAGTACACAAGGTTTTCAGGTTTTAATGCCCATTGGGACCGTGAACAAATGAGAAGAATGGGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAATATTTTCTTCCATTCTaGTCATTGGTCAATAGGGGA +
Preference number: 3 (lower is better)
Translates to: YYRTCISVGYIAVAHATQYFLPF*SLVNRG
Trigger: TCCCCTATTGACCAATGACAAGAATGGAAGAAAATA...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp TACTCACAGTTACTGTTCCGTATTAGTGTGAAGCTCTaGATTCAACATTTGCACTGTTCCTTGAAGTCACAT +
Preference number: 3 (lower is better)
Translates to: YSQLLFRISVKL*IQHLHCSLKSH
Trigger: ATGTGACTTCAAGGAACAGTGCAAATGTTGAATGCAGAGCTTCACACTAATACGGAACAGTAACTGTGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR GCA 72 bp GTATTAGAAGAAAATAAGGGTAAAATCAGGCTGAACTaGATGTATATGGCTCCACTGTGGCTTGTGACACTT +
Preference number: 3 (lower is better)
Translates to: VLEENKGKIRLN*MYMAPLWLVTL
Trigger: AAGTGTCACAAGCCACAGTGGAGCCATATACATGCAGTTCAGCCTGATTTTACCCTTATTTTCTTCTAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp AGTGTTCTCACCAGAGTTATCTTTGACTTGAGTGTGTaGGTATCTTTAAACAAGTCACTTTTTGGACCCACT +
Preference number: 3 (lower is better)
Translates to: SVLTRVIFDLSV*VSLNKSLFGPT
Trigger: AGTGGGTCCAAAAAGTGACTTGTTTAAAGATACCCACACACTCAAGTCAAAGATAACTCTGGTGAGAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp ATGCCACGGTTAAATAAATTCAGTGGAGACTATAAATaGACCAGTCAAGAGGCTAAATTTTCAGAGCACGAT +
Preference number: 3 (lower is better)
Translates to: MPRLNKFSGDYK*TSQEAKFSEHD
Trigger: ATCGTGCTCTGAAAATTTAGCCTCTTGACTGGTCCATTTATAGTCTCCACTGAATTTATTTAACCGTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR TCA 72 bp ACTGGATACTCCGAATGTTCTTATGTAGAGAGTAACTaGTGGAGAACAGATTATAATCCTTGCAAAGAAGGA +
Preference number: 3 (lower is better)
Translates to: TGYSECSYVESN*WRTDYNPCKEG
Trigger: TCCTTCTTTGCAAGGATTATAATCTGTTCTCCATCAGTTACTCTCTACATAAGAACATTCGGAGTATCCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR-3UTR CAA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGGAAAAGATAAAGATTaGCAAATGACCCTGAGGTAT +
Preference number: 3 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFGKDKD*QMTLRY
Trigger: ATACCTCAGGGTCATTTGCAAATCTTTATCTTTTCC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CCA 72 bp AGGATATACTGTCTGTCTCACTACTTTGGACTTATATaGCTTCAGATTAAGTCATCCAAGAAACATACATAC +
Preference number: 3 (lower is better)
Translates to: RIYCLSHYFGLI*LQIKSSKKHTY
Trigger: GTATGTATGTTTCTTGGATGACTTAATCTGAAGCCATATAAGTCCAAAGTAGTGAGACAGACAGTATATCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGTGGCGCCGCCGCTCGTaGTCGGTGAAGGCGATGCGG +
Preference number: 4 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWWRRRS*SVKAMR
Trigger: CCGCATCGCCTTCACCGAGCACGAGCGGCGGCGCCA...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGTCCCCAGTGTTGGTGTaGCGGCGTCAATCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWSPVLV*RRQSGR
Trigger: GCGACCGGATTGACGCCGTCACACCAACACTGGGGA...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGGGGCAGTGCGGCGGCTaGCTGCCCGCCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRGQCGG*LPARHL
Trigger: AAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCC...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGCACTGCCGGGCCCCATaGGCCCAGGGACAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRHCRAP*AQGQGR
Trigger: CCTCCCCTGTCCCTGGGCCCATGGGGCCCGGCAGTG...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGGCCGCTCGTGCTCGGTaGAGGCGATGCGGGACCACG +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRAARAR*RRCGTT
Trigger: CGTGGTCCCGCATCGCCTTCACCGAGCACGAGCGGC...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGGTTTCAGAGGAACCGTaGGGCACCAGTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWVSEEP*GTSGCS
Trigger: TGAGCAGCCACTGGTGCCCCACGGTTCCTCTGAAAC...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGCGGCCCGCTGCTGTCTaGTCCTCAGCCACGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGRPAAV*SSATLP
Trigger: AGGGAGCGTGGCTGAGGAGCAGACAGCAGCGGGCCG...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp AAGCTACGCGGTGGGGCTTCATCCCACGGGGGCAGGTaGCGTGCCAGTAGCAGGCCACTCAGCACCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KLRGGASSHGGR*RASSRPLSTLG
Trigger: CCCGAGGGTGCTGAGTGGCCTGCTACTGGCACGCAACCTGCCCCCGTGGGATGAAGCCCCACCGCGTAGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGACAGCAGCAGCGAAATaGAGATCACCTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWTAAAK*RSPAAR
Trigger: TCTGGCTGCAGGTGATCTTCATTTCGCTGCTGCTGT...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGGCAGTGCGGCGGCTaGCTGCCCGCCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQGQCGG*LPARHL
Trigger: AAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCC...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGAGCACAGCAGGTAGTTaGCCTGCCTGCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRSTAGS*PACAPA
Trigger: AGCCGGTGCGCAGGCAGGGCAACTACCTGCTGTGCT...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGTCCACCTCAGCCAGCTaGGGAACCCCGAGGCTCGCG +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWSTSAS*GTPRLA
Trigger: CGCGAGCCTCGGGGTTCCTCAGCTGGCTGAGGTGGA...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGCTTTGGGAGCCTCACTaGTGCCACTCCTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRLWEPH*CHSCRA
Trigger: AGCTCGGCAGGAGTGGCATCAGTGAGGCTCCCAAAG...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTCCCCGTAAAGGAGGGTaGGGCCTCCCATCAGTATCC +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAAPRKGG*GLPSVS
Trigger: GGATACTGATGGGAGGCCTCACCCTCCTTTACGGGG...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGAGGGGACACAGCCACTaGCGGGCCCCATGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLRGHSH*RAPWAQ
Trigger: CTGGGCCCATGGGGCCCGGCAGTGGCTGTGTCCCCT...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGCGGATGCCGCATCGCTaGGGGCCGCTGTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQRMPHR*GPLSGS
Trigger: AGAGCCGGACAGCGGCCCCCAGCGATGCGGCATCCG...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGACACCAGTGAAGTCATaGGCAGACAGGGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGTPVKS*ADRAGP
Trigger: GGGCCCGGCCCTGTCTGCCCATGACTTCACTGGTGT...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGAGTGCGGCGGCTGCCTaGCCGCCCGCCATCTTTACT +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWSAAAA*PPAIFT
Trigger: AGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACT...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGCACAGAGGAAGGGTaGCCCTCGCTGGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQGTEEG*PSLGGP
Trigger: TGGCCCTCCCAGCGAGGGGCACCCTTCCTCTGTGCC...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAACCCACGGGGGCAGGTTaGGTGCCAGTAGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQPTGAG*VPVAGH
Trigger: GTGGCCTGCTACTGGCACGCAACCTGCCCCCGTGGG...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGTCCAGAAACCCCCGCTaGCCCGTCACGCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQSRNPR*PVTHLP
Trigger: CGGGAGGTGCGTGACGGGGCAGCGGGGGTTTCTGGA...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTGATGGAGTCTCCTCTTaGCACCCGGAACCGCACATC +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAADGVSS*HPEPHI
Trigger: GATGTGCGGTTCCGGGTGGCAAGAGGAGACTCCATC...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGAGCTCCAGCGCCCCTTaGATGATGTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRSSSAP*MMFSSS
Trigger: GGAGGAGCTGAACATCATCCAAGGGGCGCTGGAGCT...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGCCAGCGCGGCCTAGATaGCGCCTTCGTTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWPARPR*RLRCAG
Trigger: GCCTGCACAACGAAGGCGCCATCTAGGCCGCGCTGG...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTGATCAGAAGCGAGGCTaGGGCTCTCTGGGGAATGAG +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAADQKRG*GSLGNE
Trigger: CTCATTCCCCAGAGAGCCCCAGCCTCGCTTCTGATC...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGGTGCTGGGAAGTCAATaGTCCATGGGTAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRVLGSQ*SMGRQG
Trigger: GCCCTGCCTACCCATGGACCATTGACTTCCCAGCAC...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGGAATTTAGCTGCAAGTaGACAAAGGAACAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWEFSCK*TKEQAP
Trigger: GGGGGCTTGTTCCTTTGTCCACTTGCAGCTAAATTC...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGTCATCTCCAAAATCTTaGACGCCATGCCCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRSSPKS*TPCPGC
Trigger: GCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGA...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGTTTCATTTCAGTGCATaGATAGCGCCAACAACCTGC +
Preference number: 4 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWFHFSA*IAPTTC
Trigger: GCAGGTTGTTGGCGCTATTCATGCACTGAAATGAAA...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGGCCCCTGGGCGAGACTaGAACGGAGCGTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWAPGRD*NGASAA
Trigger: GGCCGCGGACGCTCCGTTGCAGTCTCGCCCAGGGGC...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTTGCGCACCGGCTCGATaGGCTTGGCGTAATTCTTCT +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAACAPAR*AWRNSS
Trigger: AGAAGAATTACGCCAAGCGCATCGAGCCGGTGCGCA...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGGTTGCTAGGAAACGGTaGATGGCCAGGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRVARKR*MARRSC
Trigger: ACAGCTCCTCCTGGCCATGCACCGTTTCCTAGCAAC...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGAGTCTACTGGCTTGTTaGGCTGGTAGAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWSLLAC*AGRGSI
Trigger: AATACTACCTCTACCAGCGCAACAAGCCAGTAGACT...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTTCATGCTACATAGCGTaGAAAGCCAGCCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAASCYIA*KASPPW
Trigger: CCAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGA...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGAGTGAGCCAGGATTGTaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRSEPGL*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCACAATCCTGGCTCACT...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGCAGGGACAAAGGAACTaGAGAGGCTGTCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRQGQRN*RGCQGH
Trigger: ATGGCCCTGACAGCCTCTCCAGTTCCTTTGTCCCTG...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGTTCTTAAGAGTGTGCTaGGAAGTCAATGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWFLRVC*EVNGPW
Trigger: CCATGGACCATTGACTTCCCAGCACACTCTTAAGAA...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAATCCCCAGTGTTGGTGTaGCGGCGTCAATCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQSPVLV*RRQSGR
Trigger: GCGACCGGATTGACGCCGTCACACCAACACTGGGGA...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGGACAGGCGGATCACCTaGGGTCGGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLDRRIT*GREFET
Trigger: GGTCTCGAACTCCCGACCTCAGGTGATCCGCCTGTC...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGGCCCCTGGGCGAGACTaGAACGGAGCGTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: PRPANCHPFLSLCIDILEAPGRD*NGASAA
Trigger: GGCCGCGGACGCTCCGTTGCAGTCTCGCCCAGGGGC...CTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp GCCACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTCTTCCAAGTGGGCAGTaGGGCGGCTGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: ATTPSQLPPLFIPLYRHPLPSGQ*GGCLPA
Trigger: GGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAG...AGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGGCACAGAGGAAGGGTaGCCCTCGCTGGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSGTEEG*PSLGGP
Trigger: TGGCCCTCCCAGCGAGGGGCACCCTTCCTCTGTGCC...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGGGAAGGGGAGGAGCTTaGACTCCACATCACGTGTTT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRGRGGA*TPHHVF
Trigger: AAACACGTGATGTGGAGTGCAAGCTCCTCCCCTTCC...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTGCATGGGCTACGCTTTaGTTTGTTGCAAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAAAWATL*FVARTP
Trigger: AGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGC...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGGAAGAGGGGGATAGATaGCCTCTTCCAGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGEEGDR*PLPAWA
Trigger: AGCCCATGCTGGAAGAGGGCATCTATCCCCCTCTTC...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTAGGGAGCTTGGGTCATaGTACATAGCGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAARELGS*YIACKA
Trigger: GGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCT...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGGCAGGTCCACGATATTaGAGCGCTCCCCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRAGPRY*SAPLQT
Trigger: TGTTTGAAGGGGAGCGCTCCAATATCGTGGACCTGC...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGCCACAGGGGCAACTCTaGTTGCCCAGGAGACCTCAC +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWPQGQL*LPRRPH
Trigger: GTGAGGTCTCCTGGGCAACCAGAGTTGCCCCTGTGG...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTTGTCTAGATGCCTCATaGATCAACGGTGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAACLDAS*INGGAH
Trigger: GTGTGCTCCACCGTTGATTCATGAGGCATCTAGACA...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAAGTGCGGCGGCTGCCTaGCCGCCCGCCATCTTTACT +
Preference number: 4 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSSAAAA*PPAIFT
Trigger: AGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACT...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGGGGCAGTGCGGCGGCTaGCTGCCCGCCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: RPANCHPFLSLCIDILELGQCGG*LPARHL
Trigger: AAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCC...CAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTGGCGCCGCCGCTCGTaGTCGGTGAAGGCGATGCGG +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSWRRRS*SVKAMR
Trigger: CCGCATCGCCTTCACCGAGCACGAGCGGCGGCGCCA...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGTCTGGCAACCCGTCATaGAGCTCCGTAAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRSGNPS*SSVRVN
Trigger: ATTGACTCTTACGGAGCTGCATGACGGGTTGCCAGA...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGTCCACGGTCTTTCTCTaGCGGACCCCACTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWSTVFL*RTPLAL
Trigger: CAAAGCCAGTGGGGTCCGGCAGAGAAAGACCGTGGA...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTGCCAGGCAAGTGACCTaGCTTGGGAGGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSARQVT*LGRREA
Trigger: GGCCTCCCTCCTCCCAAGGCAGGTCACTTGCCTGGC...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GCCACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTGCAGGTACCGGCCCCTaGGCGAGACTGCAACGGAGC +
Preference number: 4 (lower is better)
Translates to: ATTPSQLPPLFIPLYRHPAGTGP*ARLQRS
Trigger: GCTCCGTTGCAGTCTCGCCCAGGGGCCGGTACCTGC...AGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp TTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCCGCCCAGGGCGGGCGTaGAGAGCGACGTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LETGFHHGGQTVSLELLTRPGRA*RATCTG
Trigger: ACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCG...GGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACCGCCCAGGGCGGGCGTaGAGAGCGACGTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDRPGRA*RATCTG
Trigger: ACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCG...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGCGCCTACGATCATCTTaGTGTCCTCGCCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWRLRSS*CPRRRG
Trigger: ACCACGACGGCGAGGACACCAAGATGATCGTAGGCG...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGCCGGCTCGATGCGCTTaGCGTAATTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGPARCA*RNSSPS
Trigger: AGAAGGAGAAGAATTACGCCAAGCGCATCGAGCCGG...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGGTTGGCTGTCTCGTCTaGCAACCCGTCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWVGCLV*QPVMQL
Trigger: GAGCTGCATGACGGGTTGCCAGACGAGACAGCCAAC...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTGGGAGGAGGGACAGTTaGCTCCCTGGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSGRRDS*LPGRRS
Trigger: GCTCCTCCTCCCAGGGAGCCAACTGTCCCTCCTCCC...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGAAACCATTATCACTGTaGGGCCAGGCAAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRKPLSL*GQASDL
Trigger: CAGGTCACTTGCCTGGCCCCACAGTGATAATGGTTT...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGAGACCCAGGCCCTGCTaGGTTTCCTTGGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLRPRPC*VSLGRG
Trigger: TCCTCTGCCCAAGGAAACCCAGCAGGGCCTGGGTCT...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCCGTACACCCGCAGCTTaGCCCGGGTCCGTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: RNGVSPWWPDCQSGTPDLRTPAA*PGSVRS
Trigger: TGAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACG...GAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGCGTACACCCGCAGCTTaGCCCGGGTCCGTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWRTPAA*PGSVRS
Trigger: TGAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACG...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGGCCGCTCGTGCTCGGTaGAGGCGATGCGGGACCACG +
Preference number: 4 (lower is better)
Translates to: RPANCHPFLSLCIDILELAARAR*RRCGTT
Trigger: CGTGGTCCCGCATCGCCTTCACCGAGCACGAGCGGC...CAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGACAAGCTCACACCAGTaGAGTCATGGGCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWTSSHQ*SHGQTG
Trigger: CCCTGTCTGCCCATGACTTCACTGGTGTGAGCTTGT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGCGTGCTTACTTGAGCTaGGCCAACCACAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWRAYLS*ANHSGV
Trigger: CACACCACTGTGGTTGGCTCAGCTCAAGTAAGCACG...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp ACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCAAGTGGTAGTTGCCCTGCCTaGGCACCGGCTCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: TGFHHGGQTVSLELLTSSGSCPA*APARCA
Trigger: AGCGCATCGAGCCGGTGCGCAGGCAGGGCAACTACC...ACTTGAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGTGGTTGGCCTTACTGTaGGTCACACAGTTCTGTTCG +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGWLALL*VTQFCS
Trigger: CGAACAGAACTGTGTGACGCACAGTAAGGCCAACCA...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACGGATGCCGCATCGCTaGGGGCCGCTGTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQRMPHR*GPLSGS
Trigger: AGAGCCGGACAGCGGCCCCCAGCGATGCGGCATCCG...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAACTAGGAAACGGTGCATaGCCAGGAGGAGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQLGNGA*PGGAVV
Trigger: CACCACAGCTCCTCCTGGCCATGCACCGTTTCCTAG...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGTGTGAGCTTAGGCGCTaGGTCGGGGAGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWCELRR*VGEEGW
Trigger: CCAGCCCTCCTCCCCGACCCAGCGCCTAAGCTCACA...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGTGCCCTCTTCCAGCATaGGCTACGCTTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGCPLPA*ATLCFV
Trigger: AACAAAGCAAAGCGTAGCCCATGCTGGAAGAGGGCA...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGCTGAGAGAGTCTGAGTaGTTCAAGCCACATGGGCGA +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWLRESE*FKPHGR
Trigger: TCGCCCATGTGGCTTGAATCACTCAGACTCTCTCAG...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAACGGCTGGCCTTCAGATaGCAGAGGTGGTTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQRLAFR*QRWLCV
Trigger: AACACACAACCACCTCTGTCATCTGAAGGCCAGCCG...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGGAGAACGTGCTTACTTaGGCTGAGCCAACCACAGTG +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWENVLT*AEPTTV
Trigger: CACTGTGGTTGGCTCAGCTCAAGTAAGCACGTTCTC...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCAGTGCGGCGGCTGCCTaGCCGCCCGCCATCTTTACT +
Preference number: 4 (lower is better)
Translates to: LETGFHHGGQTVSLELLTSAAAA*PPAIFT
Trigger: AGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACT...GGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp TTATTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGTGGCGCCGCCGCTCGTaGTCGGTGAAGGCGATGCGG +
Preference number: 4 (lower is better)
Translates to: LLETGFHHGGQTVSLELLWRRRS*SVKAMR
Trigger: CCGCATCGCCTTCACCGAGCACGAGCGGCGGCGCCA...CAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp ACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGATGTCTGAGGTGCGGATaGCGCATCGCTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TTPSQLPPLFIPLYRHPRCLRCG*RIAGGR
Trigger: GCGGCCCCCAGCGATGCGGCATCCGCACCTCAGACA...TCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp CCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGCCTCCACCGTCTTGGTaGGGAGCTCCAGCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PRPANCHPFLSLCIDILEPPPSW*GAPAPL
Trigger: AAGGGGCGCTGGAGCTCCGCACCAAGACGGTGGAGG...CTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGCCTCCACCGTCTTGGTaGGGAGCTCCAGCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSPPPSW*GAPAPL
Trigger: AAGGGGCGCTGGAGCTCCGCACCAAGACGGTGGAGG...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGATGGCGCCTTCGTTGTaGAGGCTGTGGTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQMAPSL*RLWLAL
Trigger: TAAGGCCAACCACAGCCTGCACAACGAAGGCGCCAT...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACAGGGAAGGCCAGCACTaGGCAGACCCGAAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDREGQH*ADPKRG
Trigger: CCCCCTCTTCGGGTCTGCGCAGTGCTGGCCTTCCCT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGCATACAGAGAGAACGTaGTTACTTGAGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRHTERT*LLELSQ
Trigger: TTGGCTCAGCTCAAGTAAGCACGTTCTCTCTGTATG...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCCGCCATCTTCCAAGTaGGCAGTGCGGCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPPPSSK*AVRRLP
Trigger: AGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TTATTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGCGGATGCCGCATCGCTaGGGGCCGCTGTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LLETGFHHGGQTVSLELLRMPHR*GPLSGS
Trigger: AGAGCCGGACAGCGGCCCCCAGCGATGCGGCATCCG...CAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp TTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCCGTGGTAAATCCAGGTaGTCTCGGCCCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LETGFHHGGQTVSLELLTRGKSR*SRPTGA
Trigger: CGCCCCCGTGGGCCGAGACCACCTGGATTTACCACG...GGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp AGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCCGGGAGCAGATGGCCTaGGGCACGATCTCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: RNGVSPWWPDCQSGTPDLREQMA*GTISPK
Trigger: CTTCGGAGAGATCGTGCCCCAGGCCATCTGCTCCCG...GAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGACGGTGCCTATCTCCTaGCCCAGGACGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWTVPIS*PRTQSS
Trigger: GCTGGACTGCGTCCTGGGCCAGGAGATAGGCACCGT...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTCGTCCTCCACCGTCTTaGTGCGGAGCTCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVRPPPS*CGAPAP
Trigger: GGGCGCTGGAGCTCCGCACCAAGACGGTGGAGGACG...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAATCGTTGTGCAGGCTGTaGTTGGCCTTACTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQSLCRL*LALLCV
Trigger: GACGCACAGTAAGGCCAACCACAGCCTGCACAACGA...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGGACGGTGATGCCCACTaGGGCACAGAGGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWDGDAH*GTEEGC
Trigger: GCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTC...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAACTACAGATCCCCGGCTaGCCTTCAGATGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQLQIPG*PSDDRG
Trigger: ACCTCTGTCATCTGAAGGCCAGCCGGGGATCTGTAG...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGACAGCAGCAAGCTATTaGTGCACCACTCACCCCTCA +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWTAASY*CTTHPS
Trigger: TGAGGGGTGAGTGGTGCACCAATAGCTTGCTGCTGT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATGCCGCTCGTGCTCGGTaGAGGCGATGCGGGACCACG +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHAARAR*RRCGTT
Trigger: CGTGGTCCCGCATCGCCTTCACCGAGCACGAGCGGC...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCAGTCCAGCAGCTTGCTaGCCGGGTAGGAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LETGFHHGGQTVSLELLTSPAAC*PGRKRG
Trigger: TCCCCGCTTCCTACCCGGTCAGCAAGCTGCTGGACT...GGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAACACAGTTCTGTTCGTTaGGCAGGTTGGCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQHSSVR*AGWLSR
Trigger: ACGAGACAGCCAACCTGCTCAACGAACAGAACTGTG...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGGCTGGAATGACAGGATaGAGTCAACTTGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWAGMTG*SQLASC
Trigger: GCAAGAGGCAAGTTGACTTCATCCTGTCATTCCAGC...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTTCATCTCAAACTTGCTaGCTCTGTTTAAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAASSQTC*LCLRMR
Trigger: CCTCATCCTTAAACAGAGTCAGCAAGTTTGAGATGA...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTACTTCCAAGTGGGCAGTaGGGCGGCTGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLLPSGQ*GGCLPA
Trigger: GGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAG...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAGGTAGTTGCCCTGCCTaGGCACCGGCTCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQGSCPA*APARCA
Trigger: AGCGCATCGAGCCGGTGCGCAGGCAGGGCAACTACC...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGAGCACAGCAGGTAGTTaGCCTGCCTGCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSSTAGS*PACAPA
Trigger: AGCCGGTGCGCAGGCAGGGCAACTACCTGCTGTGCT...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCACCCGGTTATAGACGGTaGCTATCTCCTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSPGYRR*LSPGPG
Trigger: TCCTGGGCCAGGAGATAGGCACCGTCTATAACCGGG...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTCCTCCACCGTCTTGGTaGGGAGCTCCAGCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVPPPSW*GAPAPL
Trigger: AAGGGGCGCTGGAGCTCCGCACCAAGACGGTGGAGG...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCGCGGGCCTGGGCGGGTaGAGCCAGCGCGGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCAGLGG*SQRGLD
Trigger: ATCTAGGCCGCGCTGGCTGCACCCGCCCAGGCCCGC...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGCAATTTTCAACTTCATaGAAATCGAGGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRQFSTS*KSRAEE
Trigger: CTCCTCTGCCCTCGATTTGCATGAAGTTGAAAATTG...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTGGGGCACCAGTGGCTaGTCAGGAGCAGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSWGTSG*SGAGEA
Trigger: AGCCTCACCTGCTCCTGAGCAGCCACTGGTGCCCCA...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGGCAGCAAGCTATTGGTaGACCACTCACCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLAASYW*TTHPSN
Trigger: GTTTGAGGGGTGAGTGGTGCACCAATAGCTTGCTGC...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGCAGTTGCTGTGAACTaGCATCTCTTCTTCGCATCC +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWAVAVN*HLFFAS
Trigger: GGATGCGAAGAAGAGATGGCAGTTCACAGCAACTGC...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGTCCATGTGGATCAGATaGCGGAAGGCGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLSMWIR*RKASFQ
Trigger: TTGGAAGGACGCCTTCCGGCATCTGATCCACATGGA...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCCCCGCCATCTTCCAAGTaGGCAGTGCGGCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PSQLPPLFIPLYRHPRVAPPSSK*AVRRLP
Trigger: AGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGG...GGCAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp TTATTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGCGTCCTCCACCGTCTTaGTGCGGAGCTCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LLETGFHHGGQTVSLELLRPPPS*CGAPAP
Trigger: GGGCGCTGGAGCTCCGCACCAAGACGGTGGAGGACG...CAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp ACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCAAGTGAAGCAGTCCCGGAGTaGGGTCATCACGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TGFHHGGQTVSLELLTSSEAVPE*GHHVLH
Trigger: GTGGAGGACGTGATGACCCCACTCCGGGACTGCTTC...ACTTGAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGTGGCAGACCCCAGGCTaGAATGACAGGATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLWQTPG*NDRMKS
Trigger: TGACTTCATCCTGTCATTCCAGCCTGGGGTCTGCCA...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAATCTGCCGGACCCCACTaGCTTTGTAGAGATGAATGG +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQSAGPH*LCRDEW
Trigger: CCATTCATCTCTACAAAGCCAGTGGGGTCCGGCAGA...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGCTGAGCCAACCACAGTaGTGTGAGAAGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWLSQPQ*CEKQRR
Trigger: CCTTCTTTGCTTCTCACACCACTGTGGTTGGCTCAG...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGAGGCAATGTTGGCACTaGGCCTCAAAACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGRQCWH*ASKPRK
Trigger: TTTTCTTGGTTTTGAGGCCCAGTGCCAACATTGCCT...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGCGTTGTAGGGATCGGTaGCCCGGAGCATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRPANCHPFLSLCIDILERCRDR*PGASPA
Trigger: TGCTGGAGATGCTCCGGGTCACCGATCCCTACAACG...CTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCGTTGTAGGGATCGGTaGCCCGGAGCATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPRCRDR*PGASPA
Trigger: TGCTGGAGATGCTCCGGGTCACCGATCCCTACAACG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGTCGACTGAGAGAGTCTaGGTGATTCAAGCCACATGG +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQSTERV*VIQATW
Trigger: CCATGTGGCTTGAATCACTCAGACTCTCTCAGTCGA...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGCAGCCCAGCCGTGGCTaGACAGACTTCCTACCTGGA +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSQPSRG*TDFLPG
Trigger: TCCAGGTAGGAAGTCTGTTCAGCCACGGCTGGGCTG...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCACTGGCCGCTCAGACATaGGTGTTGTTTGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSLAAQT*VLFEGS
Trigger: GGACCCTTCAAACAACACTCATGTCTGAGCGGCCAG...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACACTCCCTTCCACACTTaGAAAGGTCACCGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDTPFHT*KGHRRG
Trigger: CCCGCGGCGGTGACCTTTTCAAGTGTGGAAGGGAGT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGCTGTGCCAGCCCGGGTaGGTCATCTGCCTAGGATCA +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSLCQPG*VICLGS
Trigger: TGATCCTAGGCAGATGACTCACCCGGGCTGGCACAG...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGTGGGCAAGTAAACCGTaGTCGCAGACAGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLWASKP*SQTESL
Trigger: CAAGCTTTCTGTCTGCGATCACGGTTTACTTGCCCA...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAGGCTGTACCAGGCTGTaGCTTGGAGGCACAGAACTA +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQGCTRL*LGGTEL
Trigger: TAGTTCTGTGCCTCCAAGTCACAGCCTGGTACAGCC...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGACTTTTTGGACCCACTaGCCTCAAGTCAATGACTTA +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGTFWTH*PQVNDL
Trigger: TAAGTCATTGACTTGAGGTCAGTGGGTCCAAAAAGT...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGTCAGTGTCCAGTCTTTaGGAGAGTGTTCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWSVSSL*ESVLTR
Trigger: TCTGGTGAGAACACTCTCTCAAAGACTGGACACTGA...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGGGATTTCAAAGACACTaGCTACAAGCGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLGFQRH*LQAAPA
Trigger: AGCTGGTGCCGCTTGTAGTCAGTGTCTTTGAAATCC...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TTATTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGAGCGTCCGCGGCCAGTaGTCAGCAGTTCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLETGFHHGGQTVSLELLSVRGQ*SAVRLP
Trigger: AGGGAGGCGAACTGCTGAGCACTGGCCGCGGACGCT...CAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTAGCGTCCGCGGCCAGTaGTCAGCAGTTCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFSVRGQ*SAVRLP
Trigger: AGGGAGGCGAACTGCTGAGCACTGGCCGCGGACGCT...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAACTTCCAAGTGGGCAGTaGGGCGGCTGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKLPSGQ*GGCLPA
Trigger: GGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAG...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTATGTCTGAGGTGCGGATaGCGCATCGCTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLCLRCG*RIAGGR
Trigger: GCGGCCCCCAGCGATGCGGCATCCGCACCTCAGACA...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp ACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCAAGTCCCGGTTATAGACGGTaGCTATCTCCTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGFHHGGQTVSLELLTSSPGYRR*LSPGPG
Trigger: TCCTGGGCCAGGAGATAGGCACCGTCTATAACCGGG...ACTTGAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGAGATCTTAACAAACTaGAGATCCGAAAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWEILTN*RSERAR
Trigger: GCGAGCCCTTTCGGATCTGCAGTTTGTTAAGATCTC...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGGCGGGCCTGGGCGGGTaGAGCCAGCGCGGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKAGLGG*SQRGLD
Trigger: ATCTAGGCCGCGCTGGCTGCACCCGCCCAGGCCCGC...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGTGGCATGGTTGGTGTTaGACAGATGAAAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWWHGWC*TDEREE
Trigger: CTCTTCCCTTTCATCTGTGCAACACCAACCATGCCA...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTCGCCCAGGGCGGGCGTaGAGAGCGACGTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSRPGRA*RATCTG
Trigger: ACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCG...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTCGTGGTAAATCCAGGTaGTCTCGGCCCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPARGKSR*SRPTGA
Trigger: CGCCCCCGTGGGCCGAGACCACCTGGATTTACCACG...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGACATGCCGGGAGCAGATaGCCTGGGGCACGATCTCTC +
Preference number: 4 (lower is better)
Translates to: TTPSQLPPLFIPLYRHPRHAGSR*PGARSL
Trigger: GAGAGATCGTGCCCCAGGCCATCTGCTCCCGGCATG...TCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp CCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCCACGGTGCCTATCTCCTaGCCCAGGACGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSQLPPLFIPLYRHPRVATVPIS*PRTQSS
Trigger: GCTGGACTGCGTCCTGGGCCAGGAGATAGGCACCGT...GGCAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGTCATATTTCAGTTCCTaGATGACATTGGGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRSYFSS*MTLGCF
Trigger: AAAGCACCCCAATGTCATCCAGGAACTGAAATATGA...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAGGGTGCCCCTCGCTaGGAGGGCCAAGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVKGAPR*EGQGRL
Trigger: TAGCCTTCCTTGGCCCTCCCAGCGAGGGGCACCCTT...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTTGCCACCAGGGAGCTTaGGTCATGCTACATAGCGTG +
Preference number: 4 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSCHQGA*VMLHSV
Trigger: CACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAATACCAGGCTGTGACTTaGAGGCACAGAACTAGTACC +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQYQAVT*RHRTST
Trigger: GGTACTAGTTCTGTGCCTCCAAGTCACAGCCTGGTA...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTGTATGTCAGTGTATCTaGATACACGAGGAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: HNTRGTKLLTRQPARPAAVCQCI*IHEEKE
Trigger: TTCCTTTTCCTCGTGTATCCAGATACACTGACATAC...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAACAGCAGCAGCGAAATaGAGATCACCTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQTAAAK*RSPAAR
Trigger: TCTGGCTGCAGGTGATCTTCATTTCGCTGCTGCTGT...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACGTTGTAGGGATCGGTaGCCCGGAGCATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQRCRDR*PGASPA
Trigger: TGCTGGAGATGCTCCGGGTCACCGATCCCTACAACG...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCTGTTTGGGGCCAAACTaGCCCTGGCTGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPCLGPN*PWLYRQ
Trigger: CTGCCTGTACAGCCAGGGTCAGTTTGGCCCCAAACA...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACGGACACGGCACCTTCTaGGGAAGACACTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDGHGTF*GRHSRT
Trigger: AGTCCTGGAGTGTCTTCCTCAGAAGGTGCCGTGTCC...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGTGTTTCCATGATGCTTaGAGTTCAACCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGCFHDA*SSTWYF
Trigger: GAAATACCAGGTTGAACTTCAAGCATCATGGAAACA...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGACAGTGAATAAAGGCTaGGGAGGATCAAAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWTVNKG*GGSKSD
Trigger: GTCTGACTTTGATCCTCCTCAGCCTTTATTCACTGT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAGGTAGTTGCCCTGCCTaGGCACCGGCTCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLGSCPA*APARCA
Trigger: AGCGCATCGAGCCGGTGCGCAGGCAGGGCAACTACC...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TTATTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGAGCACAGCAGGTAGTTaGCCTGCCTGCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: LLETGFHHGGQTVSLELLSTAGS*PACAPA
Trigger: AGCCGGTGCGCAGGCAGGGCAACTACCTGCTGTGCT...CAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGATCTCACTGTCTGTCTaGTTAAAGGCAGAAAAATCT +
Preference number: 4 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRISLSV*LKAEKS
Trigger: AGATTTTTCTGCCTTTAAGCAGACAGACAGTGAGAT...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGCCAAAGTCATTCTCCTaGTGCCCCAAAGAAGCAACA +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLPKSFS*CPKEAT
Trigger: TGTTGCTTCTTTGGGGCAGCAGGAGAATGACTTTGG...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGCCGATTACTGGGGAATaGAGGATATCCACTGAATCC +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQPITGE*RISTES
Trigger: GGATTCAGTGGATATCCTGCATTCCCCAGTAATCGG...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTAGCAGACCCAGGCCCTaGTGGGTTTCCTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSSRPRP*WVSLGR
Trigger: TCTGCCCAAGGAAACCCAGCAGGGCCTGGGTCTGCT...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTGCAGGTACCGGCCCCTaGGCGAGACTGCAACGGAGC +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSAGTGP*ARLQRS
Trigger: GCTCCGTTGCAGTCTCGCCCAGGGGCCGGTACCTGC...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAGCAGGTACCGGCCCCTaGGCGAGACTGCAACGGAGC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKAGTGP*ARLQRS
Trigger: GCTCCGTTGCAGTCTCGCCCAGGGGCCGGTACCTGC...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGCAGCCAATCATAGGGTaGCTGCTCCAGCTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: PRPANCHPFLSLCIDILEQPIIG*LLQLRL
Trigger: AAGCCGCAGCTGGAGCAGCCACCCTATGATTGGCTG...CTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp TTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCCGCCTACGATCATCTTaGTGTCCTCGCCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LETGFHHGGQTVSLELLTRLRSS*CPRRRG
Trigger: ACCACGACGGCGAGGACACCAAGATGATCGTAGGCG...GGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTCGTCCTCCACCGTCTTaGTGCGGAGCTCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSRPPPS*CGAPAP
Trigger: GGGCGCTGGAGCTCCGCACCAAGACGGTGGAGGACG...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGCAGGTCCACGATATTaGAGCGCTCCCCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSAGPRY*SAPLQT
Trigger: TGTTTGAAGGGGAGCGCTCCAATATCGTGGACCTGC...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAAACGAAGTAGTCTACTaGCTTGTTGCGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQNEVVY*LVALVE
Trigger: CTCTACCAGCGCAACAAGCCAGTAGACTACTTCGTT...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAGCTGCTCCCCAGTGTTaGTGTGACGGCGTCAATCCG +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQAAPQC*CDGVNP
Trigger: CGGATTGACGCCGTCACACCAACACTGGGGAGCAGC...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATCCAGCGCGGCCTAGATaGCGCCTTCGTTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHPARPR*RLRCAG
Trigger: GCCTGCACAACGAAGGCGCCATCTAGGCCGCGCTGG...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGTTGCAGGGTACAGCATaGCGGACAAGCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWLQGTA*RTSSHQ
Trigger: CTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAA...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGATCAGGGTCACATCATaGGATCACAGCAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQIRVTS*DHSRVQ
Trigger: CTGAACTCTGCTGTGATCCCATGATGTGACCCTGAT...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGTGTGTAGCAGCATCTTaGGTTAACAAGAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWCVAAS*VNKSKD
Trigger: GTCCTTGCTCTTGTTAACCCAAGATGCTGCTACACA...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGCACACAGCCCAGCCGTaGCTGAACAGACTTCCTACC +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSHTAQP*LNRLPT
Trigger: GGTAGGAAGTCTGTTCAGCCACGGCTGGGCTGTGTG...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACAGGGAAAATGGGGCCTaGAGGAGGAATCTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDRENGA*RRNLAA
Trigger: AGCGGCCAGATTCCTCCTCCAGGCCCCATTTTCCCT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGAGGGCAGAAGTTCATaGTACCTGCTTAGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWEGRSS*YLLSSN
Trigger: ATTTGAGCTAAGCAGGTACCATGAACTTCTGCCCTC...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GCCACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTGGGGTTTCACCATGGTaGCCAGACTGTCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ATTPSQLPPLFIPLYRHPGVSPW*PDCQSG
Trigger: TCCAGACTGACAGTCTGGCCACCATGGTGAAACCCC...AGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAAGCAGTTCGCCTCCCTaGCTGACACTGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQSSSPP*LTLTPP
Trigger: AGGTGGAGTCAGTGTCAGTCAGGGAGGCGAACTGCT...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCCAGTCGCAGCCCGATaGTCACCGTCTCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: RPANCHPFLSLCIDILELPVAAR*SPSPHS
Trigger: AGAATGAGGAGACGGTGATCATCGGGCTGCGACTGG...CAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCAAGATGATGATGTCTaGGGTGCGGATGCCGCATCG +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPQDDDV*GADAAS
Trigger: CGATGCGGCATCCGCACCTCAGACATCATCATCTTG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTAGTCCAGCAGCTTGCTaGCCGGGTAGGAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: ALWGMRILRPHSSQLCSASPAAC*PGRKRG
Trigger: TCCCCGCTTCCTACCCGGTCAGCAAGCTGCTGGACT...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGCACAGTTCTGTTCGTTaGGCAGGTTGGCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWHSSVR*AGWLSR
Trigger: ACGAGACAGCCAACCTGCTCAACGAACAGAACTGTG...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGGTGAATGTGCTACCATaGTTTCTTTCCCTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQVNVLP*FLSLAL
Trigger: CAGAGCTAGGGAAAGAAATCATGGTAGCACATTCAC...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAAGCGTCCGCGGCCAGTaGTCAGCAGTTCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKSVRGQ*SAVRLP
Trigger: AGGGAGGCGAACTGCTGAGCACTGGCCGCGGACGCT...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGACAGGTAATAGGACTTaGTCTTCTCCATCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWTGNRT*SSPSCV
Trigger: TACGCAAGATGGAGAAGAGCAAGTCCTATTACCTGT...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGGCGTGGAGAGCGACGTaGACAGGTAATAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: PRPANCHPFLSLCIDILEAWRAT*TGNRTC
Trigger: GCAAGTCCTATTACCTGTGCACGTCGCTCTCCACGC...CTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGATCTCACTGTCTGTCTaGTTAAAGGCAGAAAAATCT +
Preference number: 4 (lower is better)
Translates to: VPARVSHLPRITPGEPQGISLSV*LKAEKS
Trigger: AGATTTTTCTGCCTTTAAGCAGACAGACAGTGAGAT...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGAGTCTACTGGCTTGTTaGGCTGGTAGAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQSLLAC*AGRGSI
Trigger: AATACTACCTCTACCAGCGCAACAAGCCAGTAGACT...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTACGCCATGCCCCGGCTaGCAACTTCACATCTCTCGT +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVTPCPG*QLHISR
Trigger: ACGAGAGATGTGAAGTTGGCAGCCGGGGCATGGCGT...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGATCACACTGGTGTTGTaGTCAGTGAGAGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQITLVL*SVRGIL
Trigger: TAAGATGCCTCTCACTGAGCACAACACCAGTGTGAT...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAACTAGGGGAGATGGCATaGCAGCAGAAAGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQLGEMA*QQKVRE
Trigger: TTCTCTGACTTTCTGCTGGCATGCCATCTCCCCTAG...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTCCAGGAGGCGGAGGTTaGAGTGAGCCAGGATTGTGC +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPAPGGGG*SEPGLC
Trigger: GCACAATCCTGGCTCACTGCAACCTCCGCCTCCTGG...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCCCCACGCCCAGCCAACTaGCACCCCTTTTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: PSQLPPLFIPLYRHPRVAPRPAN*HPFLSL
Trigger: GAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG...GGCAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp ACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCAAGTCCGCCATCTTTACTTTaGGTTCACAAGCGCCACAGC +
Preference number: 4 (lower is better)
Translates to: TGFHHGGQTVSLELLTSSPPSLL*VHKRHS
Trigger: GCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGG...ACTTGAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAACGGTGCCTATCTCCTaGCCCAGGACGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLTVPIS*PRTQSS
Trigger: GCTGGACTGCGTCCTGGGCCAGGAGATAGGCACCGT...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAAGCTCCAGCGCCCCTTaGATGATGTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TTPSQLPPLFIPLYRHPRSSSAP*MMFSSS
Trigger: GGAGGAGCTGAACATCATCCAAGGGGCGCTGGAGCT...TCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp TTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCCTCCCCTTCAAACACTaGAATGCGGGTGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LETGFHHGGQTVSLELLTLPFKH*NAGVAA
Trigger: AGCGGCTACACCCGCATTCCAGTGTTTGAAGGGGAG...GGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTCTAGGAAACGGTGCATaGCCAGGAGGAGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSLGNGA*PGGAVV
Trigger: CACCACAGCTCCTCCTGGCCATGCACCGTTTCCTAG...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAGTTGGCTGTCTCGTCTaGCAACCCGTCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQVGCLV*QPVMQL
Trigger: GAGCTGCATGACGGGTTGCCAGACGAGACAGCCAAC...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTAAGGGTGCCCCTCGCTaGGAGGGCCAAGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSKGAPR*EGQGRL
Trigger: TAGCCTTCCTTGGCCCTCCCAGCGAGGGGCACCCTT...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAATGTGAGCTTAGGCGCTaGGTCGGGGAGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKCELRR*VGEEGW
Trigger: CCAGCCCTCCTCCCCGACCCAGCGCCTAAGCTCACA...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTGGGAGGAGGGACAGTTaGCTCCCTGGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSGRRDS*LPGRRS
Trigger: GCTCCTCCTCCCAGGGAGCCAACTGTCCCTCCTCCC...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTGGTCAAGCTACGCGGTaGGGCTTCATCCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSGQATR*GFIPRG
Trigger: CCCCCGTGGGATGAAGCCCCACCGCGTAGCTTGACC...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCCCCACCAGGCCCATTaGATAGTTCTCTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPPHQAH*IVLFRV
Trigger: CACCCTGAAGAGAACTATCCAATGGGCCTGGTGGGG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCACATAAGGAATACAGGTaGGCCCAACTAAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSHKEYR*AQLKGL
Trigger: CAGCCCCTTTAGTTGGGCCCACCTGTATTCCTTATG...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGCCATTAAACAAGTCCTaGCAGGACTCACAGGAACAA +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQPLNKS*QDSQEQ
Trigger: TTGTTCCTGTGAGTCCTGCCAGGACTTGTTTAATGG...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCAAGTAACGGGGTTTCACCATaGTGGCCAGACTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TGFHHGGQTVSLELLTSSNGVSP*WPDCQS
Trigger: AGACTGACAGTCTGGCCACCATGGTGAAACCCCGTT...ACTTGAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
3UTR CAA 72 bp CTAGGAAATGCCGGCTTAGCCCAGCGGCACTGTGTGTaGTTATTAGTGACTGAGCAGCCAATGTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LGNAGLAQRHCV*LLVTEQPMSGA
Trigger: TGCCCCAGACATTGGCTGCTCAGTCACTAATAACAACACACAGTGCCGCTGGGCTAAGCCGGCATTTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TTATTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGAGCAGTTCGCCTCCCTaGCTGACACTGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: LLETGFHHGGQTVSLELLSSSPP*LTLTPP
Trigger: AGGTGGAGTCAGTGTCAGTCAGGGAGGCGAACTGCT...CAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp ACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGACAAGATGATGATGTCTaGGGTGCGGATGCCGCATCG +
Preference number: 4 (lower is better)
Translates to: TTPSQLPPLFIPLYRHPRQDDDV*GADAAS
Trigger: CGATGCGGCATCCGCACCTCAGACATCATCATCTTG...TCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCAGTCCAGCAGCTTGCTaGCCGGGTAGGAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCSPAAC*PGRKRG
Trigger: TCCCCGCTTCCTACCCGGTCAGCAAGCTGCTGGACT...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAATGCTTTCGTTCCCGGTaGGCCACTTTCTTTTTCGTT +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQCFRSR*ATFFFV
Trigger: AACGAAAAAGAAAGTGGCTCACCGGGAACGAAAGCA...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGGGAGGAGCGAAGAATTaGGCTGGTTATTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSGGAKN*AGYCCS
Trigger: GGAGCAGCAATAACCAGCTCAATTCTTCGCTCCTCC...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAACAAGCTCACACCAGTaGAGTCATGGGCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQTSSHQ*SHGQTG
Trigger: CCCTGTCTGCCCATGACTTCACTGGTGTGAGCTTGT...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTCAGCGAGATCGACGGTaGTGCCCACTGGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSQRDRR*CPLGHR
Trigger: TCTGTGCCCCAGTGGGCATCACCGTCGATCTCGCTG...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGAATGTTAAATCTTCCTaGGGGAAAGGGGTACAGTTA +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWNVKSS*GKGVQL
Trigger: TAACTGTACCCCTTTCCCTCAGGAAGATTTAACATT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGATGCAGGATATCCACTaGATCCTGAAGACCCACCTG +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWMQDIH*ILKTHL
Trigger: CAGGTGGGTCTTCAGGATTCAGTGGATATCCTGCAT...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTGCTAAGGAGCAGGGATaGCCACAGGCACAGGCAACC +
Preference number: 4 (lower is better)
Translates to: ALWGMRILRPHSSQLCSAAKEQG*PQAQAT
Trigger: GGTTGCCTGTGCCTGTGGTCATCCCTGCTCCTTAGC...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGTGCGCACCGGCTCGATaGGCTTGGCGTAATTCTTCT +
Preference number: 4 (lower is better)
Translates to: RPANCHPFLSLCIDILELCAPAR*AWRNSS
Trigger: AGAAGAATTACGCCAAGCGCATCGAGCCGGTGCGCA...CAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp TTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCCTTCAAACACTGGAATaGGGGTGTAGCCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LETGFHHGGQTVSLELLTLQTLE*GCSRSP
Trigger: TGGAGAGCGGCTACACCCGCATTCCAGTGTTTGAAG...GGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTATGGCGCCTTCGTTGTaGAGGCTGTGGTTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVMAPSL*RLWLAL
Trigger: TAAGGCCAACCACAGCCTGCACAACGAAGGCGCCAT...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGAGGATGAAGTCAACTTaGCTCTTGCCAATGATAAAC +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWRMKST*LLPMIN
Trigger: GTTTATCATTGGCAAGAGGCAAGTTGACTTCATCCT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTAGGGGCAACTCTGGTTaGCCAGGAGACCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFRGNSG*PGDLTF
Trigger: GAAGGTGAGGTCTCCTGGGCAACCAGAGTTGCCCCT...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCAGCCAATCATAGGGTaGCTGCTCCAGCTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFQPIIG*LLQLRL
Trigger: AAGCCGCAGCTGGAGCAGCCACCCTATGATTGGCTG...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCCGCCATCTTCCAAGTaGGCAGTGCGGCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLPPSSK*AVRRLP
Trigger: AGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGG...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAACGTGGTAAATCCAGGTaGTCTCGGCCCACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: YYRTCISVGYIAVAHATQRGKSR*SRPTGA
Trigger: CGCCCCCGTGGGCCGAGACCACCTGGATTTACCACG...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCCGGCTCGATGCGCTTaGCGTAATTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPPARCA*RNSSPS
Trigger: AGAAGGAGAAGAATTACGCCAAGCGCATCGAGCCGG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTCGGGAGCAGATGGCCTaGGGCACGATCTCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSREQMA*GTISPK
Trigger: CTTCGGAGAGATCGTGCCCCAGGCCATCTGCTCCCG...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGCCATCAAGGCATTTTaGTATTGCTGTCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQAIKAF*YCCLEI
Trigger: GATCTCAAGACAGCAATACCAAAATGCCTTGATGGC...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCACACCAGTGAAGTCATaGGCAGACAGGGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCTPVKS*ADRAGP
Trigger: GGGCCCGGCCCTGTCTGCCCATGACTTCACTGGTGT...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGAAAAATTCCTTAGGGTaGGAGCAAAATCACATTCCC +
Preference number: 4 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWKNSLG*EQNHIP
Trigger: GGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTAAGACACTCCAGGACTaGCATCCCAGAGGAAATACT +
Preference number: 4 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSKTLQD*HPRGNT
Trigger: AGTATTTCCTCTGGGATGCCAGTCCTGGAGTGTCTT...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTGTCAGAGGCAGCAGCTaGCATCCCCTCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSVRGSS*HPLSSP
Trigger: GGGAGAGGAGAGGGGATGCCAGCTGCTGCCTCTGAC...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGTTCCATTCTTGTCATTaGTCAATAGGGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLFHSCH*SIGEGR
Trigger: TCTACCCTCCCCTATTGACCAATGACAAGAATGGAA...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGTGTACTCTCTGCAGATaGTCCAAAATTGTAATGGAG +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWCTLCR*SKIVME
Trigger: CTCCATTACAATTTTGGACCATCTGCAGAGAGTACA...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp GGGAGAAGAAAACTGCCACTTAGCCAAGGCCTCCCTTaGCGCAGTGAGCCTAAACAGAAAACGCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRRKLPLSQGLP*RSEPKQKTLSP
Trigger: AGGAGAGAGCGTTTTCTGTTTAGGCTCACTGCGCAAAGGGAGGCCTTGGCTAAGTGGCAGTTTTCTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATCCAGTCGCAGCCCGATaGTCACCGTCTCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHPVAAR*SPSPHS
Trigger: AGAATGAGGAGACGGTGATCATCGGGCTGCGACTGG...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCCACCACGTCTCGTTATTaGTGTTCTGCCCGTACACCC +
Preference number: 4 (lower is better)
Translates to: PSQLPPLFIPLYRHPRVATTSRY*CSARTP
Trigger: GGGTGTACGGGCAGAACATCAATAACGAGACGTGGT...GGCAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTACCACGTCTCGTTATTaGTGTTCTGCCCGTACACCC +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVTTSRY*CSARTP
Trigger: GGGTGTACGGGCAGAACATCAATAACGAGACGTGGT...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp ACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGACGATCTCTCCGAAGATaGCGATACCGATGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TTPSQLPPLFIPLYRHPRRSLRR*RYRWWR
Trigger: TCTCCACCATCGGTATCGTCATCTTCGGAGAGATCG...TCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAACAGGAGGAGCTGTGGTaGTATTTTAACCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQQEELW*YFNLHL
Trigger: GAGATGAAGGTTAAAATATCACCACAGCTCCTCCTG...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGCTTTCCCCTGCAGAATaGGAACGAAGTAGTCTACTG +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWLSPAE*ERSSLL
Trigger: CAGTAGACTACTTCGTTCTCATTCTGCAGGGGAAAG...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGTTGGTATTGCTGTCTTaGGATCTTAACAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLLVLLS*DLNKLQ
Trigger: CTGCAGTTTGTTAAGATCTCAAGACAGCAATACCAA...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCAGCGAGATCGACGGTaGTGCCCACTGGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLQRDRR*CPLGHR
Trigger: TCTGTGCCCCAGTGGGCATCACCGTCGATCTCGCTG...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAATCTCCTCCAACCATCTaGGAGGTTGGTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQSPPTI*EVGFLR
Trigger: CCTCAGGAAACCAACCTCTCAGATGGTTGGAGGAGA...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAACCCCAGAGAACAAGGTaGGCACCTTCCTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKPQRTR*APSCAS
Trigger: GCTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGG...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTCCAACCACAGTGGTGTaGGAAGCAAAGAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPAPTTVV*EAKKVP
Trigger: GGGGACCTTCTTTGCTTCTCACACCACTGTGGTTGG...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGCTCTACAAGACCCTCTaGTCAATATTTGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQLYKTL*SIFVSS
Trigger: TGAGGAAACAAATATTGATCAGAGGGTCTTGTAGAG...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGAAAAGTACTCCCCATTaGACACAAACATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWKSTPH*TQTFHL
Trigger: GAGATGAAATGTTTGTGTTCAATGGGGAGTACTTTT...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGTCACCACGAATAGCCTaGGACAACTACATATTTAAG +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQSPRIA*DNYIFK
Trigger: CTTAAATATGTAGTTGTCTCAGGCTATTCGTGGTGA...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAAGGGAGGGGGCTCCATaGAAGGTACGTCTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQREGAP*KVRLKS
Trigger: ACTTTTCAGACGTACCTTTCATGGAGCCCCCTCCCT...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTACAAGCGGCACCAGCTaGCACGGTCAATTAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSTSGTS*HGQLVR
Trigger: TCTCACTAATTGACCGTGTCAGCTGGTGCCGCTTGT...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGATCAGTCTGGAACTCCTaGCCTCAAGTGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: TTPSQLPPLFIPLYRHPRSVWNS*PQVIHL
Trigger: GAGGTGGATCACTTGAGGTCAGGAGTTCCAGACTGA...TCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp TTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCGTTATTGATGTTCTaGCCGTACACCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LETGFHHGGQTVSLELLTSLLMF*PYTRSL
Trigger: CAAGCTGCGGGTGTACGGGCAGAACATCAATAACGA...GGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCGTGGAGAGCGACGTaGACAGGTAATAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPAAWRAT*TGNRTC
Trigger: GCAAGTCCTATTACCTGTGCACGTCGCTCTCCACGC...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAAGGATGAAGTCAACTTaGCTCTTGCCAATGATAAAC +
Preference number: 4 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQRMKST*LLPMIN
Trigger: GTTTATCATTGGCAAGAGGCAAGTTGACTTCATCCT...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCGCAGTCCAGCGGAGGTaGCAAAGAGCAGCCACATCG +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCAVQRR*QRAATS
Trigger: CGATGTGGCTGCTCTTTGGCACCTCCGCTGGACTGC...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGACTGTCCAAAGAAGATaGTCTTCTATGTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLTVQRR*SSMLSC
Trigger: GCATGACAACATAGAAGAGCATCTTCTTTGGACAGT...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTCTTGGGCAGAGGAATTaGCCAGTACATTCATTCATC +
Preference number: 4 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSLGQRN*PVHSFI
Trigger: GATGAATGAATGTACTGGGCAATTCCTCTGCCCAAG...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGCTTTGCACAGAAGTATaGTCTACTTGCGTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLLCTEV*STCVAL
Trigger: TAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAG...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCCGGCTCGATGCGCTTaGCGTAATTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPANCHPFLSLCIDILELPARCA*RNSSPS
Trigger: AGAAGGAGAAGAATTACGCCAAGCGCATCGAGCCGG...CAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCACATGCCGGGAGCAGATaGCCTGGGGCACGATCTCTC +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPHAGSR*PGARSL
Trigger: GAGAGATCGTGCCCCAGGCCATCTGCTCCCGGCATG...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCATGCCGGGAGCAGATaGCCTGGGGCACGATCTCTC +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLHAGSR*PGARSL
Trigger: GAGAGATCGTGCCCCAGGCCATCTGCTCCCGGCATG...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAGAAGCAGTCCCGGAGTaGGGTCATCACGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKEAVPE*GHHVLH
Trigger: GTGGAGGACGTGATGACCCCACTCCGGGACTGCTTC...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGGCAGGTCCACGATATTaGAGCGCTCCCCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: RPANCHPFLSLCIDILELAGPRY*SAPLQT
Trigger: TGTTTGAAGGGGAGCGCTCCAATATCGTGGACCTGC...CAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTAGGGCACAAGGTCTTTaGTCTCAGGATGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSRAQGL*SQDVAG
Trigger: CCCTGCAACATCCTGAGACCAAAGACCTTGTGCCCT...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGACGGTGATGCCCACTaGGGCACAGAGGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPDGDAH*GTEEGC
Trigger: GCACCCTTCCTCTGTGCCCCAGTGGGCATCACCGTC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTTGGCAGACCCCAGGCTaGAATGACAGGATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVWQTPG*NDRMKS
Trigger: TGACTTCATCCTGTCATTCCAGCCTGGGGTCTGCCA...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGCAAGTGACCTGCCTTaGGAGGAGGGAGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPASDLP*EEGGRG
Trigger: TCCACGGCCTCCCTCCTCCCAAGGCAGGTCACTTGC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCACTGCTTCTCTATCACTaGCTTTGCACAGAAGTATGC +
Preference number: 4 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSLLLYH*LCTEVC
Trigger: GCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAG...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTGGAACCGCACATCAGTaGATTTCAAAGACACTGACT +
Preference number: 4 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSGTAHQ*ISKTLT
Trigger: AGTCAGTGTCTTTGAAATCCACTGATGTGCGGTTCC...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCGGACTTATTTTCACCTaGAGAGGCTGTCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPGLIFT*RGCQGH
Trigger: ATGGCCCTGACAGCCTCTCCAGGTGAAAATAAGTCC...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433628.2
CDS-3UTR TCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATCAAGATGATGATGTCTaGGGTGCGGATGCCGCATCG +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHQDDDV*GADAAS
Trigger: CGATGCGGCATCCGCACCTCAGACATCATCATCTTG...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TTATTAGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACAGCAGCAGCGAAATaGAGATCACCTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLETGFHHGGQTVSLELLTAAAK*RSPAAR
Trigger: TCTGGCTGCAGGTGATCTTCATTTCGCTGCTGCTGT...CAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGCTTTCCCCTGCAGAATaGGAACGAAGTAGTCTACTG +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSLSPAE*ERSSLL
Trigger: CAGTAGACTACTTCGTTCTCATTCTGCAGGGGAAAG...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGACAACTCTGTTCTGCTaGCAACAAAGGTACGAGACA +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWTTLFC*QQRYET
Trigger: TGTCTCGTACCTTTGTTGTCAGCAGAACAGAGTTGT...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGACCCCAGGCTGGAATaGCAGGATGAAGTCAACTTG +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPADPRLE*QDEVNL
Trigger: CAAGTTGACTTCATCCTGTCATTCCAGCCTGGGGTC...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTGACATGAGTGTTGTTTaGAGGGTCCTAAGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVDMSVV*RVLSSP
Trigger: GGGAGAGCTTAGGACCCTTCAAACAACACTCATGTC...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTCCTAGGATCCATGGATaGGGAAGCTTCAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSPRIHG*GSFKTD
Trigger: GTCTGTCTTGAAGCTTCCTCATCCATGGATCCTAGG...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTAAGCAGGGTCTTACTTaGGGGCCAAGGCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPAKQGLT*GPRQCW
Trigger: CCAACATTGCCTTGGCCCTCAAGTAAGACCCTGCTT...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACTTGGTTCAGCCAAGCTaGATACAATGGCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDLVQPS*IQWHGW
Trigger: CCAACCATGCCATTGTATTCAGCTTGGCTGAACCAA...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCCTTGGAGCATTTCCTaGTTTGAGCTAAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPPWSIS*FELRAH
Trigger: ATGAGCCCTTAGCTCAAATCAGGAAATGCTCCAAGG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCGGAGCACAATTTTTGTaGAATAGAAACCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPGAQFL*NRNPGC
Trigger: GCACCCGGGGTTTCTATTTCACAAAAATTGTGCTCC...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTGCGTGGAGAGCGACGTaGACAGGTAATAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: ALWGMRILRPHSSQLCSAAWRAT*TGNRTC
Trigger: GCAAGTCCTATTACCTGTGCACGTCGCTCTCCACGC...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATTGCGCACCGGCTCGATaGGCTTGGCGTAATTCTTCT +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHCAPAR*AWRNSS
Trigger: AGAAGAATTACGCCAAGCGCATCGAGCCGGTGCGCA...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTCCCGGTTATAGACGGTaGCTATCTCCTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSPGYRR*LSPGPG
Trigger: TCCTGGGCCAGGAGATAGGCACCGTCTATAACCGGG...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTTGGTTGGCCTTACTGTaGGTCACACAGTTCTGTTCG +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVWLALL*VTQFCS
Trigger: CGAACAGAACTGTGTGACGCACAGTAAGGCCAACCA...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGATTAGTGTGAAGCTCTaGATTCAACATTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQISVKL*IQHLHC
Trigger: ACAGTGCAAATGTTGAATGCAGAGCTTCACACTAAT...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTGTCTTACCTAGGAAATaGCGGCTTAGCCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSVLPRK*RLSPAA
Trigger: TGCCGCTGGGCTAAGCCGGCATTTCCTAGGTAAGAC...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGGACAGCAGGAAAAATTaGCTCCATTTTCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWDSRKN*LHFPWS
Trigger: GCTCCAAGGAAAATGGAGGCAATTTTTCCTGCTGTC...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGTTGTTTCCTCAGAAGTaGCGAGTTGAAAAACGGCTC +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWLFPQK*RVEKRL
Trigger: GAGCCGTTTTTCAACTCGGCACTTCTGAGGAAACAA...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGCCTTTGTCCTGGGACTaGTTGAAAATAAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWPLSWD*LKIRAQ
Trigger: CTGTGCTCTTATTTTCAAGCAGTCCCAGGACAAAGG...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGTGTATCTGTACTCTCTaGAGATGGTCCAAAATTGTA +
Preference number: 4 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQCICTL*RWSKIV
Trigger: TACAATTTTGGACCATCTGCAGAGAGTACAGATACA...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTCCGCCATCTTTACTTTaGGTTCACAAGCGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPAPPSLL*VHKRHS
Trigger: GCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGG...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GCCACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTCGGTTGAGAATGATGTaGGGCAAGATGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: ATTPSQLPPLFIPLYRHPRLRMM*GKMMMS
Trigger: AGACATCATCATCTTGCCCCACATCATTCTCAACCG...AGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CCA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGCCATCAAGGCATTTTaGTATTGCTGTCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSAIKAF*YCCLEI
Trigger: GATCTCAAGACAGCAATACCAAAATGCCTTGATGGC...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCTTTGTAGAGATGAATaGCAGAGGCCTTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPLCRDE*QRPSKP
Trigger: TGGCTTGGAAGGCCTCTGCCATTCATCTCTACAAAG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATACCTCAGAGGCCTTCTaGACCCTAACCTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHTSEAF*TLTYQL
Trigger: GAGCTGGTAGGTTAGGGTCCAGAAGGCCTCTGAGGT...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACAAAAGTGAATCCATGTaGATCAGATGCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDKSESM*IRCRKA
Trigger: CGCCTTCCGGCATCTGATCCACATGGATTCACTTTT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTATACAATGGCATGGTTaGTGTTGCACAGATGAAAGG +
Preference number: 4 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSIQWHG*CCTDER
Trigger: CCTTTCATCTGTGCAACACCAACCATGCCATTGTAT...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTCTACTTTCAGGTAGTTaGGCGATACCTGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVLLSGS*AIPGEM
Trigger: CATCTCCCCAGGTATCGCCCAACTACCTGAAAGTAG...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAAGCCTCCCCAGCAGTTaGTCAGTGGTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKSLPSS*SVVQQT
Trigger: GGTCTGCTGTACCACTGACCAACTGCTGGGGAGGCT...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTATAGATGTAATTGCATaGCCACCTAACAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSIDVIA*PPNRGE
Trigger: CTCTCCTCTGTTAGGTGGCCATGCAATTACATCTAT...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp GGAGGAGGAATCTGGCCGCTCAGACATGAGTGTTGTTaGAAGGGTCCTAAGCTCTCCCCAAAGGAGATGTTA +
Preference number: 4 (lower is better)
Translates to: GGGIWPLRHECC*KGPKLSPKEML
Trigger: TAACATCTCCTTTGGGGAGAGCTTAGGACCCTTCAAACAACACTCATGTCTGAGCGGCCAGATTCCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp CTTGTCACAGCCTTGCTAAGTAACAGCAGCAAGCTATaGGTGCACCACTCACCCCTCAAACGGAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LVTALLSNSSKL*VHHSPLKRRQM
Trigger: CATTTGCCTCCGTTTGAGGGGTGAGTGGTGCACCAATAGCTTGCTGCTGTTACTTAGCAAGGCTGTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp CAAGTGCTAGAGGAGGAAGGCCTACTTGTCACAGCCTaGCTAAGTAACAGCAGCAAGCTATTGGTGCACCAC +
Preference number: 4 (lower is better)
Translates to: QVLEEEGLLVTA*LSNSSKLLVHH
Trigger: GTGGTGCACCAATAGCTTGCTGCTGTTACTTAGCAAGGCTGTGACAAGTAGGCCTTCCTCCTCTAGCACTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp AGGAGGATCAAAGTCAGACACAAAGCAGGGTCTTACTaGAGGGCCAAGGCAATGTTGGCACTGGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RRIKVRHKAGSY*RAKAMLALGLK
Trigger: TTTGAGGCCCAGTGCCAACATTGCCTTGGCCCTCAAGTAAGACCCTGCTTTGTGTCTGACTTTGATCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp ATAATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATaGGCTGTACCAGGCTGTGACTTGGAGGCACAGAAC +
Preference number: 4 (lower is better)
Translates to: IILAKKDTFPLG*AVPGCDLEAQN
Trigger: GTTCTGTGCCTCCAAGTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp GACCCAGGCCCTGCTGGGTTTCCTTGGGCAGAGGAATaGCCCAGTACATTCATTCATCTCTGCAAAGATAGA +
Preference number: 4 (lower is better)
Translates to: DPGPAGFPWAEE*PSTFIHLCKDR
Trigger: TCTATCTTTGCAGAGATGAATGAATGTACTGGGCAATTCCTCTGCCCAAGGAAACCCAGCAGGGCCTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTACGTACACCCGCAGCTTaGCCCGGGTCCGTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLRTPAA*PGSVRS
Trigger: TGAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACG...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTCATCACGCCATAGTATaGGAAGGCGCTCGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPAHHAIV*EGARFK
Trigger: TTTGAAGCGAGCGCCTTCTCATACTATGGCGTGATG...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTACTGAGAGAGTCTGAGTaGTTCAAGCCACATGGGCGA +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLLRESE*FKPHGR
Trigger: TCGCCCATGTGGCTTGAATCACTCAGACTCTCTCAG...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTATCCGGTCGCTTCGACTaGGAGAGTCTGAGTGATTCA +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLSGRFD*ESLSDS
Trigger: TGAATCACTCAGACTCTCTCAGTCGAAGCGACCGGA...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAGGAGGAGCGAAGAATTaGGCTGGTTATTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLGGAKN*AGYCCS
Trigger: GGAGCAGCAATAACCAGCTCAATTCTTCGCTCCTCC...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAATCATCTCCAAAATCTTaGACGCCATGCCCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKSSPKS*TPCPGC
Trigger: GCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGA...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAATCTATGCAGTTGCTGTaGACTGCCATCTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQSMQLL*TAISSS
Trigger: CGAAGAAGAGATGGCAGTTCACAGCAACTGCATAGA...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAATTTCATGGAGGTACTTaGGAGGCCCTGCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKFHGGT*EALPTR
Trigger: CCTTGTGGGCAGGGCCTCTCAAGTACCTCCATGAAA...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATGTGGGGCCAGGCAAGTaGCCTGCCTTGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHVGPGK*PALGGG
Trigger: CCCTCCTCCCAAGGCAGGTCACTTGCCTGGCCCCAC...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACATAAGAGCACAGATATaGGGCCCTTGGAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDIRAQI*GPWREN
Trigger: ATTTTCCCTCCAAGGGCCTCATATCTGTGCTCTTAT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACCAGTCACTAATACCCTaGCAGGAAAAGCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDQSLIP*QEKHFR
Trigger: TCTGAAGTGCTTTTCCTGTCAGGGTATTAGTGACTG...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACCACCAGAGTTATCTTTaGCTTGAGTGTGTGGGTATC +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDHQSYL*LECVGI
Trigger: GATACCCACACACTCAAGTCAAAGATAACTCTGGTG...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTTGGAGCCCAAGCAGCTaGGCACACATTTTTCCCACG +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSWSPSS*AHIFPT
Trigger: CGTGGGAAAAATGTGTGCTCAGCTGCTTGGGCTCCA...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAGAAAGCAGAAACAGGTaGCTTCCAGAAACCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLESRNR*LPETPA
Trigger: AGCGGGGGTTTCTGGAAGTCACCTGTTTCTGCTTTC...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACGGAGTTTTATACCGTaGGAAGACCATTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQRSFIP*EDHSAT
Trigger: AGTGGCAGAATGGTCTTCTCACGGTATAAAACTCCG...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGACACGTAGATATCAATaGGATGGAGTCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSTRRYQ*DGVSSC
Trigger: GCAAGAGGAGACTCCATCTCATTGATATCTACGTGT...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATTGTCTGAGGTGCGGATaGCGCATCGCTGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHCLRCG*RIAGGR
Trigger: GCGGCCCCCAGCGATGCGGCATCCGCACCTCAGACA...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAGAGATCTTAACAAACTaGAGATCCGAAAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQEILTN*RSERAR
Trigger: GCGAGCCCTTTCGGATCTGCAGTTTGTTAAGATCTC...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACATTTGTCCATCCGGGATaGCATCAAGGCATTTTGGTA +
Preference number: 4 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTFVHPG*HQGILV
Trigger: TACCAAAATGCCTTGATGGCATCCCGGATGGACAAA...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTGTCCATCCGGGATaGCATCAAGGCATTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSFVHPG*HQGILV
Trigger: TACCAAAATGCCTTGATGGCATCCCGGATGGACAAA...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGACGCCATGCCCCGGCTaGCAACTTCACATCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKTPCPG*QLHISR
Trigger: ACGAGAGATGTGAAGTTGGCAGCCGGGGCATGGCGT...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCATACTGAGCCGGGCATaGACAACACCCGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPILSRA*TTPEAP
Trigger: TGGTGCCTCGGGTGTTGTGCATGCCCGGCTCAGTAT...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTAAGTCATTCTCCTGCTaGCCCAAAGAAGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPAKSFSC*PKEATA
Trigger: GGCTGTTGCTTCTTTGGGGCAGCAGGAGAATGACTT...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCAGAACTCAGGGGTCTaGATCTGGTCCACTCGACCC +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLQNSGV*IWSTRP
Trigger: GGGTCGAGTGGACCAGATGCAGACCCCTGAGTTCTG...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTGGGCCTATACAGGTCTaGTCCTCAACCCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: ALWGMRILRPHSSQLCSAGPIQV*SSTQRE
Trigger: CTCTCTTTGGGTTGAGGAGCAGACCTGTATAGGCCC...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTTCTGCTGCCACTTTCTaGCCTGCTTCTAATGAAAGC +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVSAATF*PASNES
Trigger: GCTTTCATTAGAAGCAGGGCAGAAAGTGGCAGCAGA...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCTCCTGTTTGAACACTaGACAGTCACTAATACCCTG +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPLLFEH*TVTNTL
Trigger: CAGGGTATTAGTGACTGTGCAGTGTTCAAACAGGAG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGCGGTTGAGAATGATGTaGGGCAAGATGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSRLRMM*GKMMMS
Trigger: AGACATCATCATCTTGCCCCACATCATTCTCAACCG...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCACGCCTACGATCATCTTaGTGTCCTCGCCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPRLRSS*CPRRRG
Trigger: ACCACGACGGCGAGGACACCAAGATGATCGTAGGCG...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAAGCTCCAGCGCCCCTTaGATGATGTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPSSSAP*MMFSSS
Trigger: GGAGGAGCTGAACATCATCCAAGGGGCGCTGGAGCT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCCTCCCCTTCAAACACTaGAATGCGGGTGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCLPFKH*NAGVAA
Trigger: AGCGGCTACACCCGCATTCCAGTGTTTGAAGGGGAG...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTGTGATTCAAGCCACATaGGCGAGGAGGGGACTTATT +
Preference number: 4 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFVIQAT*ARRGLI
Trigger: AATAAGTCCCCTCCTCGCCCATGTGGCTTGAATCAC...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTTCGTTGTGCAGGCTGTaGTTGGCCTTACTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSSLCRL*LALLCV
Trigger: GACGCACAGTAAGGCCAACCACAGCCTGCACAACGA...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAAAAAATTCCTTAGGGTaGGAGCAAAATCACATTCCC +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQKNSLG*EQNHIP
Trigger: GGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTT...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTGCAAAGCCAGGCAAGTaGGTAGGGCAGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSAKPGK*VGQLVQ
Trigger: CTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGC...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAACCTGCTGGGTTTCCTTaGGCAGAGGAATTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKPAGFP*AEELPS
Trigger: ACTGGGCAATTCCTCTGCCCAAGGAAACCCAGCAGG...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGTGGCAAATGATTCTCTaGGTCCAAAGATCGGAAAGT +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWWQMIL*VQRSES
Trigger: ACTTTCCGATCTTTGGACCCAGAGAATCATTTGCCA...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGTACTTTGGACTTATATaGCTTCAGATTAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLYFGLI*LQIKSS
Trigger: GGATGACTTAATCTGAAGCCATATAAGTCCAAAGTA...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTTTGAACATCAGAGGATaGGAAGAGGGCTCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSLNIRG*EEGSVS
Trigger: GCTTACAGAGCCCTCTTCCCATCCTCTGATGTTCAA...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp AGGTGGTTGTGTGTTTTTACTAGGCAGGACACAGACTaGATCAGCCAGGGCCTATACAGGTCTGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: RWLCVFTRQDTD*ISQGLYRSAPQ
Trigger: TTGAGGAGCAGACCTGTATAGGCCCTGGCTGATCAAGTCTGTGTCCTGCCTAGTAAAAACACACAACCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACCACGTCTCGTTATTaGTGTTCTGCCCGTACACCC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKTTSRY*CSARTP
Trigger: GGGTGTACGGGCAGAACATCAATAACGAGACGTGGT...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTTGCTTTCGTTCCCGGTaGGCCACTTTCTTTTTCGTT +
Preference number: 4 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFCFRSR*ATFFFV
Trigger: AACGAAAAAGAAAGTGGCTCACCGGGAACGAAAGCA...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAATTTCAGTTCCTGGATaGCATTGGGGTGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQISVPG*HWGALA
Trigger: TGCTAAAGCACCCCAATGTCATCCAGGAACTGAAAT...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCTCCGGTCGCTTCGACTaGGAGAGTCTGAGTGATTCA +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCSGRFD*ESLSDS
Trigger: TGAATCACTCAGACTCTCTCAGTCGAAGCGACCGGA...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGAATGTTAAATCTTCCTaGGGGAAAGGGGTACAGTTA +
Preference number: 4 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWNVKSS*GKGVQL
Trigger: TAACTGTACCCCTTTCCCTCAGGAAGATTTAACATT...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGGCAGGACACAGACTTaGTCAGCCAGGGCCTATACA +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPGRTQT*SARAYT
Trigger: TGTATAGGCCCTGGCTGATCAAGTCTGTGTCCTGCC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTATCACCCAGATACCCTTaGTGGACAGAAGCACCACTA +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLSPRYP*WTEAPL
Trigger: TAGTGGTGCTTCTGTCCATCAAGGGTATCTGGGTGA...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCCACTGCTCAAATGCATaGCCTGTACACTATGATACA +
Preference number: 4 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPHCSNA*PVHYDT
Trigger: TGTATCATAGTGTACAGGTCATGCATTTGAGCAGTG...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTTCTATGTTGTCATGCTaGGATCCAGTCCCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFSMLSC*DPVPAF
Trigger: GAAAGCTGGGACTGGATCTCAGCATGACAACATAGA...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAGGTCAGGCAGTGTCTaGAAGCCAATTCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLRSGSV*KPILSA
Trigger: TGCTGACAGAATTGGCTTTCAGACACTGCCTGACCT...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTTCAGAAGTGCCGAGTTaGAAAACGGCTCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSSEVPS*KTALGS
Trigger: GCTCCCTAGAGCCGTTTTTCAACTCGGCACTTCTGA...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTCCAAAGATCGGAAAGTaGAAAGCACACAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSPKIGK*KAHSWN
Trigger: ATTCCAGCTGTGTGCTTTTCACTTTCCGATCTTTGG...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATCTGCTCCCTACTCTATaGAGTTGCTGTGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHLLPTL*SCCELP
Trigger: TGGCAGTTCACAGCAACTGCATAGAGTAGGGAGCAG...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAGAAAGTGACTATCCATaGCTGCTCCGACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKESDYP*LLRPSS
Trigger: GGAGGAAGGTCGGAGCAGGCATGGATAGTCACTTTC...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTCTTGGAAAGAAGATTTaGCAAGCAAACCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSLGKKI*QANLPH
Trigger: GTGGGGAAGGTTTGCTTGGCAAATCTTCTTTCCAAG...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAAAAGCCACATGCAGTTaGATGTCAGATTTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQKATCS*MSDLEV
Trigger: TACTTCTAAATCTGACATGCAACTGCATGTGGCTTT...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTACGGGAGCAGATGGCCTaGGGCACGATCTCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLREQMA*GTISPK
Trigger: CTTCGGAGAGATCGTGCCCCAGGCCATCTGCTCCCG...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCTCCCCTTCAAACACTaGAATGCGGGTGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPLPFKH*NAGVAA
Trigger: AGCGGCTACACCCGCATTCCAGTGTTTGAAGGGGAG...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCATGTGCAGGCTGTGGTTaGCCTTACTGTGCGTCACAC +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPCAGCG*PYCASH
Trigger: GTGTGACGCACAGTAAGGCCAACCACAGCCTGCACA...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGTGTGCAGGCTGTGGTTaGCCTTACTGTGCGTCACAC +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKCAGCG*PYCASH
Trigger: GTGTGACGCACAGTAAGGCCAACCACAGCCTGCACA...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTTTTCCTGAGGGAAAATaGGGCCTGGAGGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSFPEGK*GLEEES
Trigger: AGATTCCTCCTCCAGGCCCCATTTTCCCTCAGGAAA...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGCCACTCCCTCCCACTTaGGGATGCCAACCACTTCAA +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKPLPPT*GCQPLQ
Trigger: TTGAAGTGGTTGGCATCCCCAAGTGGGAGGGAGTGG...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAATCTGCAGCCAAATCTaGCCCCCAAAGAACTGCATC +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLICSQI*PPKNCI
Trigger: GATGCAGTTCTTTGGGGGCCAGATTTGGCTGCAGAT...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAGATTCCAAAAAGATGTaGTTTAGGAATGGATCACAG +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQDSKKM*FRNGSQ
Trigger: CTGTGATCCATTCCTAAACCACATCTTTTTGGAATC...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp ATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTaGAACGCCATGCCCCGGCTGCCAACTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: ILFGRNQFISKI*NAMPRLPTSHL
Trigger: GAGATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
3UTR CAA 72 bp AAATTCTGGGTTAACCTACAACTCACCCAGATACCCTaGATGGACAGAAGCACCACTAGCCTAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KFWVNLQLTQIP*MDRSTTSLEPR
Trigger: TCTGGGCTCTAGGCTAGTGGTGCTTCTGTCCATCAAGGGTATCTGGGTGAGTTGTAGGTTAACCCAGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp CACAAAGCAGGGTCTTACTTGAGGGCCAAGGCAATGTaGGCACTGGGCCTCAAAACCAAGAAAAGGCATATT +
Preference number: 4 (lower is better)
Translates to: HKAGSYLRAKAM*ALGLKTKKRHI
Trigger: AATATGCCTTTTCTTGGTTTTGAGGCCCAGTGCCAACATTGCCTTGGCCCTCAAGTAAGACCCTGCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp CACTATAGGCATTGTAGAACACCAGGCAACCCCTTCTaGGTTGCTAGACTGAACTCCCAACCTTACAGCATG +
Preference number: 4 (lower is better)
Translates to: HYRHCRTPGNPF*VARLNSQPYSM
Trigger: CATGCTGTAAGGTTGGGAGTTCAGTCTAGCAACCAAGAAGGGGTTGCCTGGTGTTCTACAATGCCTATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp AGTGACTCTGGCAAGGCTGCTTCTCTATCACTGGCTTaGCACAGAAGTATGCTCTACTTGCGTTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: SDSGKAASLSLA*HRSMLYLRCFR
Trigger: CCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGAAGCAGCCTTGCCAGAGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGCGATCTCTCCGAAGATaGCGATACCGATGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKRSLRR*RYRWWR
Trigger: TCTCCACCATCGGTATCGTCATCTTCGGAGAGATCG...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCCATCACGCCATAGTATaGGAAGGCGCTCGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCHHAIV*EGARFK
Trigger: TTTGAAGCGAGCGCCTTCTCATACTATGGCGTGATG...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCTCGACTGAGAGAGTCTaGGTGATTCAAGCCACATGG +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCSTERV*VIQATW
Trigger: CCATGTGGCTTGAATCACTCAGACTCTCTCAGTCGA...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGACCCCAGGCTGGAATaGCAGGATGAAGTCAACTTG +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPDPRLE*QDEVNL
Trigger: CAAGTTGACTTCATCCTGTCATTCCAGCCTGGGGTC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAACATCACGTGTTTACTaGAAAAGCCCTGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQTSRVY*KSPVED
Trigger: ATCTTCCACAGGGCTTTTTCAGTAAACACGTGATGT...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTGATTTTGAATTTGCCTaGCGCATATGGGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFDFEFA*RIWDKQ
Trigger: CTGCTTGTCCCATATGCGTCAGGCAAATTCAAAATC...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGGGACTGGTCTCATGTaGGTGATGAGGGTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPGTGLM*VMRVRR
Trigger: CCTTCTTACCCTCATCACTCACATGAGACCAGTCCC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCATCACAGAGGGTCCCTaGAGCTCCACCGTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPITEGP*SSTVSS
Trigger: AGAACTTACGGTGGAGCTTCAGGGACCCTCTGTGAT...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGCAGGAGGCTGGGAGTaGATGTGCTACCATGATTTC +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPAGGWE*MCYHDF
Trigger: GAAATCATGGTAGCACATTCACTCCCAGCCTCCTGC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTGGAGTAGACAAGGCCTaGGATAAACCTTCCCACACA +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSGVDKA*DKPSHT
Trigger: TGTGTGGGAAGGTTTATCTCAGGCCTTGTCTACTCC...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTTCTTGGTTGCTAGACTaGACTCCCAACCTTACAGCA +
Preference number: 4 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSSWLLD*TPNLTA
Trigger: TGCTGTAAGGTTGGGAGTTCAGTCTAGCAACCAAGA...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGACAGGTAATAGGACTTaGTCTTCTCCATCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: RPANCHPFLSLCIDILELTGNRT*SSPSCV
Trigger: TACGCAAGATGGAGAAGAGCAAGTCCTATTACCTGT...CAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR GCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGCTTCAAACACTGGAATaGGGGTGTAGCCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKLQTLE*GCSRSP
Trigger: TGGAGAGCGGCTACACCCGCATTCCAGTGTTTGAAG...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCTTCAAACACTGGAATaGGGGTGTAGCCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPLQTLE*GCSRSP
Trigger: TGGAGAGCGGCTACACCCGCATTCCAGTGTTTGAAG...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACAATTTTCAACTTCATaGAAATCGAGGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQQFSTS*KSRAEE
Trigger: CTCCTCTGCCCTCGATTTGCATGAAGTTGAAAATTG...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAATACGCTTTGCTTTGTTaGAAGGACCCCTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQYALLC*KDPSSL
Trigger: TAAAGATGAGGGGTCCTTGCAACAAAGCAAAGCGTA...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAATATAAGAGAATAATTTaGAAGAAGCCATCACACCGA +
Preference number: 4 (lower is better)
Translates to: VLERPCPQGRRPASILIQYKRII*KKPSHR
Trigger: TCGGTGTGATGGCTTCTTGCAAATTATTCTCTTATA...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCTGGTGGGAGGAAAGCTaGTCCCTACTCTATGCAGTT +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCWWEES*SLLYAV
Trigger: AACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCA...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTTATAGCTGTGGCTCATaGTACCCAATTCCAGATTTC +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVYSCGS*YPIPDF
Trigger: GAAATCTGGAATTGGGTAGCATGAGCCACAGCTATA...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp ACCAGCAAAGCCAGGCAAGTGGGTAGGGCAGTTGGTTCAGCCAAGCTGAATACACAGGAAATTACACACTaGCATGACGAAGATGATGAT +
Preference number: 4 (lower is better)
Translates to: TSKARQVGRAVGSAKLNTQEITH*HDEDDD
Trigger: ATCATCATCTTCGTCATGGCAGTGTGTAATTTCCTG...TGTATTCAGCTTGGCTGAACCAACTGCCCTACCCACTTGCCTGGCTTTGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGCCGCCATCTTTACTTTaGGTTCACAAGCGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKPPSLL*VHKRHS
Trigger: GCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGG...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTAGAAGCAGTCCCGGAGTaGGGTCATCACGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLEAVPE*GHHVLH
Trigger: GTGGAGGACGTGATGACCCCACTCCGGGACTGCTTC...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATAGCGAAGAATTGAGCTaGTTATTGCTGCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHSEELS*LLLLPS
Trigger: ACTGGGGAGCAGCAATAACCAGCTCAATTCTTCGCT...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTAACAGACTTCCTACCTaGAGTAGGGAGAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSNRLPT*SREKKT
Trigger: AGTTTTCTTCTCCCTACTCCAGGTAGGAAGTCTGTT...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGGAGGCTGGGGCTCTCTaGGGAATGAGAATCCTAAGA +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLEAGAL*GMRILR
Trigger: TCTTAGGATTCTCATTCCCCAGAGAGCCCCAGCCTC...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTATACACACCGATTACTaGGGAATGCAGGATATCCAC +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPAIHTDY*GMQDIH
Trigger: GTGGATATCCTGCATTCCCCAGTAATCGGTGTGTAT...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTACCAGCAGTTGGTCAGTaGTACAGCAGACCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLPAVGQ*YSRPRP
Trigger: GGGCCTGGGTCTGCTGTACCACTGACCAACTGCTGG...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTAGCCAGATGATTCCATaGCAAATGATTCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPASQMIP*QMILWV
Trigger: GACCCAGAGAATCATTTGCCATGGAATCATCTGGCT...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCGCTGGAATGACAGGATaGAGTCAACTTGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPAGMTG*SQLASC
Trigger: GCAAGAGGCAAGTTGACTTCATCCTGTCATTCCAGC...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAATACACTATGATACAGTaGATAAAGGCTGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQYTMIQ*IKAEED
Trigger: ATCCTCCTCAGCCTTTATTCACTGTATCATAGTGTA...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTGAGCATTTCCTGATTTaGGCTAAGGGCTCATCTAGA +
Preference number: 4 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSEHFLI*AKGSSR
Trigger: TCTAGATGAGCCCTTAGCTCAAATCAGGAAATGCTC...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGCACAATGATGAATTTTaGATCTCGTCCCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSHNDEF*ISSLCF
Trigger: GAAACAAAGGGACGAGATTCAAAATTCATCATTGTG...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAATCGTTATTGATGTTCTaGCCGTACACCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: YYRTCISVGYIAVAHATQSLLMF*PYTRSL
Trigger: CAAGCTGCGGGTGTACGGGCAGAACATCAATAACGA...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAATGGATGACATTGGGGTaGTTTAGCAGCCTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKWMTLG*FSSLRR
Trigger: CCTTCTAAGGCTGCTAAAGCACCCCAATGTCATCCA...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGTCTGGCAACCCGTCATaGAGCTCCGTAAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKSGNPS*SSVRVN
Trigger: ATTGACTCTTACGGAGCTGCATGACGGGTTGCCAGA...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATGAAGTATGCTCTACTTaGGTTGCTTTAGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHEVCST*VALGQD
Trigger: ATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTC...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCAAGTTCTTCTTTTCAGTGTTaGTATGATTTGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: TGFHHGGQTVSLELLTSSSSFQC*YDLGFL
Trigger: CAAGAAACCCAAATCATACCAACACTGAAAAGAAGA...ACTTGAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
3UTR CAA 72 bp ATAGATGCCCTCTTCCAGCATGGGCTACGCTTTGCTTaGTTGCAAGGACCCCTCATCTTTATACACTCATCA +
Preference number: 4 (lower is better)
Translates to: IDALFQHGLRFA*LQGPLIFIHSS
Trigger: TGATGAGTGTATAAAGATGAGGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCTGGAAGAGGGCATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTTCACATCTTCTAAGGTaGCGATTCCCAGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: ALWGMRILRPHSSQLCSASHLLR*RFPELH
Trigger: ATGAAGTTCTGGGAATCGTCACCTTAGAAGATGTGA...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATTCACATCTTCTAAGGTaGCGATTCCCAGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHSHLLR*RFPELH
Trigger: ATGAAGTTCTGGGAATCGTCACCTTAGAAGATGTGA...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAACAGGTAATAGGACTTaGTCTTCTCCATCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLTGNRT*SSPSCV
Trigger: TACGCAAGATGGAGAAGAGCAAGTCCTATTACCTGT...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGTGGATGACATTGGGGTaGTTTAGCAGCCTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLWMTLG*FSSLRR
Trigger: CCTTCTAAGGCTGCTAAAGCACCCCAATGTCATCCA...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTAATAGAAACCCCGGGTaGATCACGATAAAGCTTAGA +
Preference number: 4 (lower is better)
Translates to: ALWGMRILRPHSSQLCSANRNPG*ITIKLR
Trigger: TCTAAGCTTTATCGTGATGCACCCGGGGTTTCTATT...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTATTTCCAATTTCCAGCTaGAGTAGACAATATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLFPISS*SRQYGH
Trigger: GTGCCCATATTGTCTACTGCAGCTGGAAATTGGAAA...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAAAACGAAGTAGTCTACTaGCTTGTTGCGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: YYRTCISVGYIAVAHATQNEVVY*LVALVE
Trigger: CTCTACCAGCGCAACAAGCCAGTAGACTACTTCGTT...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCAGCGAAGAATTGAGCTaGTTATTGCTGCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPSEELS*LLLLPS
Trigger: ACTGGGGAGCAGCAATAACCAGCTCAATTCTTCGCT...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCATCAGGGTCACATCATaGGATCACAGCAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPIRVTS*DHSRVQ
Trigger: CTGAACTCTGCTGTGATCCCATGATGTGACCCTGAT...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAATGTGTAGCAGCATCTTaGGTTAACAAGAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKCVAAS*VNKSKD
Trigger: GTCCTTGCTCTTGTTAACCCAAGATGCTGCTACACA...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTTCAGGGGTCTGCATCTaGTCCACTCGACCCACTCCC +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFSGVCI*STRPTP
Trigger: GGGAGTGGGTCGAGTGGACCAGATGCAGACCCCTGA...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTACCAAGAAACCACCTTaGAAATATTTCATGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVTKKPP*KYFMEV
Trigger: TACCTCCATGAAATATTTCCAAGGTGGTTTCTTGGT...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTAAGTTCTTCAGGGACTaGTCTCATGTGAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSKFFRD*SHVSDE
Trigger: CTCATCACTCACATGAGACCAGTCCCTGAAGAACTT...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTAGTGGAGACTATAAATaGACCAGTCAAGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: SIWAESVHLQNLERHAPASGDYK*TSQEAK
Trigger: TTTAGCCTCTTGACTGGTCCATTTATAGTCTCCACT...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACTTTGACTTGAGTGTGTaGGTATCTTTAAACAAGTCA +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDFDLSV*VSLNKS
Trigger: TGACTTGTTTAAAGATACCCACACACTCAAGTCAAA...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGTGAAATCTCTACCATaGAGCTACCAGAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPVKSLP*SYQSNP
Trigger: AGGGTTGCTCTGGTAGCTCCATGGTAGAGATTTCAC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAATGATACACAACTTTTaGGAGGCCCTGAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLMIHNF*EALRVK
Trigger: TTTCACTCTCAGGGCCTCCCAAAAGTTGTGTATCAT...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAATCTGTCTCACTACTTTaGACTTATATGGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQSVSLL*TYMASD
Trigger: ATCTGAAGCCATATAAGTCCAAAGTAGTGAGACAGA...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACAACTGTAATAGCTATTaGTCTTCAAGTGGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDNCNSY*SSSGFR
Trigger: TCTAAACCCACTTGAAGACCAATAGCTATTACAGTT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAAAGAGGGGTTAGGATTTaGGGAGTAGCTACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: YYRTCISVGYIAVAHATQRGVRI*GVATLL
Trigger: GAGCAAAGTAGCTACTCCCCAAATCCTAACCCCTCT...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCAGGAGGAGCTGTGGTaGTATTTTAACCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLQEELW*YFNLHL
Trigger: GAGATGAAGGTTAAAATATCACCACAGCTCCTCCTG...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGATTTCAGTTCCTGGATaGCATTGGGGTGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLISVPG*HWGALA
Trigger: TGCTAAAGCACCCCAATGTCATCCAGGAACTGAAAT...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTGGCATCTTAAGAAACTaGCTTTTGTATCTAGATGGC +
Preference number: 4 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSGILRN*LLYLDG
Trigger: GCCATCTAGATACAAAAGTCAGTTTCTTAAGATGCC...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTCATCAGAAAAATTTCTaGATCCCCAGATCACTTTCC +
Preference number: 4 (lower is better)
Translates to: ALWGMRILRPHSSQLCSAHQKNF*IPRSLS
Trigger: GGAAAGTGATCTGGGGATTCAGAAATTTTTCTGATG...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAGAACCTTTGTTTCCATaGTGCTTGAAGTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKEPLFP*CLKFNL
Trigger: CAGGTTGAACTTCAAGCATCATGGAAACAAAGGTTC...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGAGGGTAAAATCAGGCTaGACTGCATGTATATGGCTC +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLRVKSG*TACIWL
Trigger: GAGCCATATACATGCAGTTCAGCCTGATTTTACCCT...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAAAGGCATTTTGGTATTaGTGTCTTGAGATCTTAACA +
Preference number: 4 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQKAFWY*CLEILT
Trigger: TGTTAAGATCTCAAGACAGCAATACCAAAATGCCTT...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAATCCACTGAGAAGTTaGTCATTGATACATCAGAAA +
Preference number: 4 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVNPLRS*SLIHQK
Trigger: TTTCTGATGTATCAATGAGCAACTTCTCAGTGGATT...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATACTGAAAAAGCCCTGTaGAAGATTTCCATTTGGCAT +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHTEKAL*KISIWH
Trigger: ATGCCAAATGGAAATCTTCCACAGGGCTTTTTCAGT...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATCCTGGAGGAGGAATCTaGCCGCTCAGACATGAGTGT +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHPGGGI*PLRHEC
Trigger: ACACTCATGTCTGAGCGGCCAGATTCCTCCTCCAGG...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGGAGGAGGGAGGCCGTaGACTCACAGCTGTACTGTA +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFGGGRP*THSCTV
Trigger: TACAGTACAGCTGTGAGTCCACGGCCTCCCTCCTCC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTACCATCCCTTTGTCCTaGGACTGCTTGAAAATAAGA +
Preference number: 4 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSTIPLS*DCLKIR
Trigger: TCTTATTTTCAAGCAGTCCCAGGACAAAGGGATGGT...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAAGTGTTGGTATGATTTaGGTTTCTTGTTTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: TTPSQLPPLFIPLYRHPRSVGMI*VSCLCV
Trigger: AACACACAAACAAGAAACCCAAATCATACCAACACT...TCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
3UTR CAA 72 bp TCTCTATCACTGGCTTTGCACAGAAGTATGCTCTACTaGCGTTGCTTTAGGGCAGGATTCTATTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLSLALHRSMLY*RCFRAGFYFEG
Trigger: TCCCTCAAAATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGACATCACGTGTTTACTaGAAAAGCCCTGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLTSRVY*KSPVED
Trigger: ATCTTCCACAGGGCTTTTTCAGTAAACACGTGATGT...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTTCCCAGAGGAAATACTaGGCCGGGCATGCACAACAC +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFSQRKY*AGHAQH
Trigger: GTGTTGTGCATGCCCGGCTCAGTATTTCCTCTGGGA...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp CCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAATTTGCACTGTTCCTTaGAGTCACATTAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: PIRVTSWDHSRVQTEQLKICTVP*SHIRRW
Trigger: CCATCTTCTAATGTGACTTCAAGGAACAGTGCAAAT...TTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCTGACCTCAAGTCAATaGCTTAGTAGAACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLLTSSQ*LSRTAV
Trigger: TACTGCAGTTCTACTAAGTCATTGACTTGAGGTCAG...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GATCCATGGATGAGGAAGCTTCAAGACAGACCTTGTCCTAGTCACAGACGAAGTAAGATAAGTCTATATTaGCTTGTCCTGTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: DPWMRKLQDRPCPSHRRSKISLY*LVLWSI
Trigger: AATGGACCACAGGACAAGTCAATATAGACTTATCTT...ACTTCGTCTGTGACTAGGACAAGGTCTGTCTTGAAGCTTCCTCATCCATGGATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTATCGTTATTGATGTTCTaGCCGTACACCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLSLLMF*PYTRSL
Trigger: CAAGCTGCGGGTGTACGGGCAGAACATCAATAACGA...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATAAGAAAGGGAAGAACTaGCTTCTTATACTACAGAAC +
Preference number: 4 (lower is better)
Translates to: NQFISKILNAMPRLPTSHKKGKN*LLILQN
Trigger: GTTCTGTAGTATAAGAAGGCAGTTCTTCCCTTTCTT...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCTGGAAGATTTCCATTTaGCATCTGTGTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPWKISI*HLCSSI
Trigger: GATGCTGCTACACAGATGCCAAATGGAAATCTTCCA...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCACTGAAAAAGCCCTGTaGAAGATTTCCATTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCTEKAL*KISIWH
Trigger: ATGCCAAATGGAAATCTTCCACAGGGCTTTTTCAGT...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCTTGGAAATATTTCATaGAGGTACTTGAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPLGNIS*RYLRGP
Trigger: AGGGCCTCTCAAGTACCTCCATGAAATATTTCCAAG...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCAAGACAGCATTTCACTaGGCTAAGATACACCTCATT +
Preference number: 4 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCKTAFH*AKIHLI
Trigger: AATGAGGTGTATCTTAGCCCAGTGAAATGCTGTCTT...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCGATCTCTCCGAAGATaGCGATACCGATGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFRSLRR*RYRWWR
Trigger: TCTCCACCATCGGTATCGTCATCTTCGGAGAGATCG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAATGCACGATAGCCAGGTaGGATTTACCTTTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: YYRTCISVGYIAVAHATQCTIAR*DLPFLN
Trigger: ATTTAAGAAAGGTAAATCTCACCTGGCTATCGTGCA...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGTGCACGATAGCCAGGTaGGATTTACCTTTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLCTIAR*DLPFLN
Trigger: ATTTAAGAAAGGTAAATCTCACCTGGCTATCGTGCA...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGTTGGTATTGCTGTCTTaGGATCTTAACAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKLVLLS*DLNKLQ
Trigger: CTGCAGTTTGTTAAGATCTCAAGACAGCAATACCAA...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTATATCCACTGAATCCTaGAGACCCACCTGCACACGC +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFISTES*RPTCTR
Trigger: GCGTGTGCAGGTGGGTCTTCAGGATTCAGTGGATAT...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCAAACCTTCCCCACACTaGAAAATGTTTACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: MILFGRNQFISKILNAMPKPSPH*KMFTQC
Trigger: ACACTGAGTAAACATTTTTCAGTGTGGGGAAGGTTT...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAACGTCTCACAAGTTCTTaGGATACTTGGAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: YYRTCISVGYIAVAHATQRLTSS*DTWKED
Trigger: ATCTTCTTTCCAAGTATCTCAAGAACTTGTGAGACG...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCATTCTCCTCAACCCTTTaGAAAGAAAAGCCCATATCT +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPFSSTL*KEKPIS
Trigger: AGATATGGGCTTTTCTTTGCAAAGGGTTGAGGAGAA...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTTGTCCCCAGATGTTCTaGTCTCCCATGGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFCPQMF*SPMELF
Trigger: GAAGAGCTCCATGGGAGACCAGAACATCTGGGGACA...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAAAGAATAACAGAAAATaGATACGAACTTGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPKNNRK*IRTWRL
Trigger: TAGCCGCCAAGTTCGTATTCATTTTCTGTTATTCTT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGTTGTTATTAGTGACTaGGCAGCCAATGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFVVISD*AANVWG
Trigger: GCCCCAGACATTGGCTGCTCAGTCACTAATAACAAC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTAATTGAGAGGCCTGAATaGGACCTTTGGTCTTACCTA +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLIERPE*DLWSYL
Trigger: TAGGTAAGACCAAAGGTCTCATTCAGGCCTCTCAAT...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR TCA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAAAGGGCACAATCAGTGTaGATAAATTCACTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: YYRTCISVGYIAVAHATQRAQSV*INSLQN
Trigger: ATTCTGAAGTGAATTTATTCACACTGATTGTGCCCT...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCTAAGATTTTTCTCTTaGCATAAGCATACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLLRFFS*HKHTSA
Trigger: AGCAGAGGTATGCTTATGGCAAGAGAAAAATCTTAG...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTACGGTTGAGAATGATGTaGGGCAAGATGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLRLRMM*GKMMMS
Trigger: AGACATCATCATCTTGCCCCACATCATTCTCAACCG...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTTCAGCAGTTCTTCCCTaGAATGTCTCCATCCACAGA +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFSAVLP*NVSIHR
Trigger: TCTGTGGATGGAGACATTTCAGGGAAGAACTGCTGA...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTATGTTCACGGTCCCAATaGGCATTAAAACCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLCSRSQ*ALKPEN
Trigger: GTTTTCAGGTTTTAATGCCCATTGGGACCGTGAACA...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp CACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTaGCCAATGTCTGTGATGTTGAAAGAAAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: HPFLSLCIDILE*PMSVMLKERML
Trigger: AAGCATTCTTTCTTTCAACATCACAGACATTGGCAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR TCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTATGTCTGGGGCAATTTaGCTGGATACTCCGAATGTT +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFMSGAI*LDTPNV
Trigger: AACATTCGGAGTATCCAGTCAAATTGCCCCAGACAT...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCCTACTCTATGCAGTTaGTGTGAACTGCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFPTLCS*CELPSL
Trigger: AAGAGATGGCAGTTCACAGCAACTGCATAGAGTAGG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATATGCTCTACTTGCGTTaGTTTAGGGCAGGATTCTAT +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHMLYLR*FRAGFY
Trigger: ATAGAATCCTGCCCTAAAGCAACGCAAGTAGAGCAT...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATAAAATCAGGCTGAACTaGATGTATATGGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHKIRLN*MYMAPL
Trigger: CAGTGGAGCCATATACATGCAGTTCAGCCTGATTTT...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTATCATATTTCAGTTCCTaGATGACATTGGGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLSYFSS*MTLGCF
Trigger: AAAGCACCCCAATGTCATCCAGGAACTGAAATATGA...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR TCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATTGTTCCGTATTAGTGTaGAGCTCTGCATTCAACATT +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHCSVLV*SSAFNI
Trigger: AATGTTGAATGCAGAGCTTCACACTAATACGGAACA...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATACAGATTATAATCCTTaGAAAGAAGGACACCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHTDYNP*KEGHLP
Trigger: GGGAAGGTGTCCTTCTTTGCAAGGATTATAATCTGT...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATTTATTCTTAAGAGTGTaGTGGGAAGTCAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHLFLRV*WEVNGP
Trigger: TGGACCATTGACTTCCCAGCACACTCTTAAGAATAA...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCTCTATCACTGGCTTTaGACAGAAGTATGCTCTACT +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFLYHWL*TEVCST
Trigger: AGTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCTGGGGCAATTTGACTaGATACTCCGAATGTTCTTA +
Preference number: 4 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFLGQFD*ILRMFL
Trigger: TAAGAACATTCGGAGTATCCAGTCAAATTGCCCCAG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTATTCCAGTGCATTACATaGTATTGTATATCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLFQCIT*YCISVE
Trigger: CTCCACTGATATACAATACCATGTAATGCACTGGAA...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR GCA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTAAAGGCATTTTGGTATTaGTGTCTTGAGATCTTAACA +
Preference number: 4 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLKAFWY*CLEILT
Trigger: TGTTAAGATCTCAAGACAGCAATACCAAAATGCCTT...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR GCA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATGAAGTTCATGGTACCTaGTTAGCTCAAATTCCTATT +
Preference number: 4 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHEVHGT*LAQIPI
Trigger: AATAGGAATTTGAGCTAAGCAGGTACCATGAACTTC...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
3UTR CAA 72 bp AAACCTTGTGTACTCAAGTCTTTCTTACAGTATGTGTaGGATCTGTGTACATATAAACCTTGGCATACAAAC +
Preference number: 4 (lower is better)
Translates to: KPCVLKSFLQYV*DLCTYKPWHTN
Trigger: GTTTGTATGCCAAGGTTTATATGTACACAGATCCAACACATACTGTAAGAAAGACTTGAGTACACAAGGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS GCA 90 bp TTCAACCCGGCGGCGCGAGCGCAGGTACCGGCCCCTGGGCGAGACTaGAACGGAGCGTCCGCGGCCAGTGCTCAGCAGTTCGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: FNPAARAQVPAPGRD*NGASAASAQQFASL
Trigger: CAGGGAGGCGAACTGCTGAGCACTGGCCGCGGACGCTCCGTTGCAGTCTCGCCCAGGGGCCGGTACCTGCGCTCGCGCCGCCGGGTTGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 90 bp CGCCTACGATCATCTTGGTGTCCTCGCCGTCGTGGTAAATCCAGGTaGTCTCGGCCCACGGGGGCGGCGGGAGCCCGGCCACCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: RLRSSWCPRRRGKSR*SRPTGAAGARPPPS
Trigger: GCTCGGGGGTGGCCGGGCTCCCGCCGCCCCCGTGGGCCGAGACCACCTGGATTTACCACGACGGCGAGGACACCAAGATGATCGTAGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 90 bp CGGCGCCACCCGTGGACCCCGAGCCGCCGGCGCCCAGGGCGGGCGTaGAGAGCGACGTGCACAGGTAATAGGACTTGCTCTTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: RRHPWTPSRRRPGRA*RATCTGNRTCSSPS
Trigger: AGATGGAGAAGAGCAAGTCCTATTACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCGCCGGCGGCTCGGGGTCCACGGGTGGCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 90 bp GCGAGCGCTGAGGCTGCGGCGCGCCGCCATCTTCCAAGTGGGCAGTaGGGCGGCTGCCTGCCCGCCCGCCATCTTTACTTTGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: ASAEAAARRHLPSGQ*GGCLPARHLYFGFT
Trigger: TGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGGCGCGCCGCAGCCTCAGCGCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 90 bp GCTTCATCCTTTCAACCCGGCGGCGCGAGCGCAGGTACCGGCCCCTaGGCGAGACTGCAACGGAGCGTCCGCGGCCAGTGCTCAGCAGTT +
Preference number: 5 (lower is better)
Translates to: ASSFQPGGASAGTGP*ARLQRSVRGQCSAV
Trigger: AACTGCTGAGCACTGGCCGCGGACGCTCCGTTGCAGTCTCGCCCAGGGGCCGGTACCTGCGCTCGCGCCGCCGGGTTGAAAGGATGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 90 bp CTGCGGCGCGCCGCCATCTTCCAAGTGGGCAGTGCGGCGGCTGCCTaGCCGCCCGCCATCTTTACTTTGGGTTCACAAGCGCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: LRRAAIFQVGSAAAA*PPAIFTLGSQAPQP
Trigger: TGGCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGGCGCGCCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 90 bp GAGGCTGCGGCGCGCCGCCATCTTCCAAGTGGGCAGTGCGGCGGCTaGCTGCCCGCCCGCCATCTTTACTTTGGGTTCACAAGCGCCACA +
Preference number: 5 (lower is better)
Translates to: EAAARRHLPSGQCGG*LPARHLYFGFTSAT
Trigger: TGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGGCGCGCCGCAGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS TCA 90 bp ACTGCAACGGAGCGTCCGCGGCCAGTGCTCAGCAGTTCGCCTCCCTaGCTGACACTGACTCCACCTCAGCCAGCTGAGGAACCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: TATERPRPVLSSSPP*LTLTPPQPAEEPRG
Trigger: GCCTCGGGGTTCCTCAGCTGGCTGAGGTGGAGTCAGTGTCAGTCAGGGAGGCGAACTGCTGAGCACTGGCCGCGGACGCTCCGTTGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369875.3
ENST00000369878.9
CDS TCA 90 bp GGCCATGCCGGGAGCAGATGGCCTGGGGCACGATCTCTCCGAAGATaGCGATACCGATGGTGGAGACTACCACGGCCACGAGGCCCGAGC +
Preference number: 5 (lower is better)
Translates to: GHAGSRWPGARSLRR*RYRWWRLPRPRGPS
Trigger: GCTCGGGCCTCGTGGCCGTGGTAGTCTCCACCATCGGTATCGTCATCTTCGGAGAGATCGTGCCCCAGGCCATCTGCTCCCGGCATGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 90 bp TGGACCCCGAGCCGCCGGCGCCCAGGGCGGGCGTGGAGAGCGACGTaGACAGGTAATAGGACTTGCTCTTCTCCATCTTGCGTAGCGGTT +
Preference number: 5 (lower is better)
Translates to: WTPSRRRPGRAWRAT*TGNRTCSSPSCVAV
Trigger: AACCGCTACGCAAGATGGAGAAGAGCAAGTCCTATTACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCGCCGGCGGCTCGGGGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTTCGCCTACGATCATCTaGGTGTCCTCGCCGTCGTGG +
Preference number: 5 (lower is better)
Translates to: HNTRGTKLLTRQPARPAASPTII*VSSPSW
Trigger: CCACGACGGCGAGGACACCAAGATGATCGTAGGCGA...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTCTGGCCTGCTCTTGCTaGGAGCCCCAGAGAACAAGG +
Preference number: 5 (lower is better)
Translates to: HNTRGTKLLTRQPARPAALACSC*EPQRTR
Trigger: CCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCCAG...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS TCA 90 bp CGAGGTGCGGCGGTTGAGAATGATGTGGGGCAAGATGATGATGTCTaGGGTGCGGATGCCGCATCGCTGGGGGCCGCTGTCCGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RGAAVENDVGQDDDV*GADAASLGAAVRLW
Trigger: CCAGAGCCGGACAGCGGCCCCCAGCGATGCGGCATCCGCACCTCAGACATCATCATCTTGCCCCACATCATTCTCAACCGCCGCACCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGATGCTTCTACTTCTGTaGCTAGGAAACGGTGCATGG +
Preference number: 5 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWMLLLL*LGNGAW
Trigger: CCATGCACCGTTTCCTAGCAACAGAAGTAGAAGCAT...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS GCA 90 bp TGCTCGGTGAAGGCGATGCGGGACCACGTCTCGTTATTGATGTTCTaGCCGTACACCCGCAGCTTGACCCGGGTCCGTTCGCTCACCCGC +
Preference number: 5 (lower is better)
Translates to: CSVKAMRDHVSLLMF*PYTRSLTRVRSLTR
Trigger: GCGGGTGAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACGGGCAGAACATCAATAACGAGACGTGGTCCCGCATCGCCTTCACCGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GAAGTCATGGGCAGACAGGGCCGGGCCCTCGGGACTGGGCGGGTGCGGGCCTGGACTTGGAAAGAAGATTaGCCAAGCAAACCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: EVMGRQGRALGTGRVRAWTWKED*PSKPSP
Trigger: TGGGGAAGGTTTGCTTGGCAAATCTTCTTTCCAAGT...CCAGGCCCGCACCCGCCCAGTCCCGAGGGCCCGGCCCTGTCTGCCCATGACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTCCGTACACCCGCAGCTaGACCCGGGTCCGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSPYTRS*TRVRSL
Trigger: GAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACGG...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTCTCACCCAGATACCCTaGATGGACAGAAGCACCACT +
Preference number: 5 (lower is better)
Translates to: HNTRGTKLLTRQPARPAALTQIP*MDRSTT
Trigger: AGTGGTGCTTCTGTCCATCAAGGGTATCTGGGTGAG...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp AGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCCCGTACACCCGCAGCTaGACCCGGGTCCGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: RNGVSPWWPDCQSGTPDLPYTRS*TRVRSL
Trigger: GAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACGG...GAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp CACAACACCCGAGGCACCAAACTGCTCACCAGGCAGCCAGCCCGGCCCGCTGCTGAATTGAGCTGGTTATaGCTGCTCCCCAGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: HNTRGTKLLTRQPARPAAELSWL*LLPSVG
Trigger: ACCAACACTGGGGAGCAGCAATAACCAGCTCAATTC...AGCAGCGGGCCGGGCTGGCTGCCTGGTGAGCAGTTTGGTGCCTCGGGTGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGACCTTCCCCCTAGGATaGGCTGTACCAGGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWTFPLG*AVPGCD
Trigger: GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GACCAGGGAGGTGGGCGACGACACTCTGTGAGCTTAGGCGCTGGGTCGGGGAGGGTGTTGGCCTCCTGTTaGAACACTGCACAGTCACTA +
Preference number: 5 (lower is better)
Translates to: DQGGGRRHSVSLGAGSGRVLASC*NTAQSL
Trigger: TAGTGACTGTGCAGTGTTCAAACAGGAGGCCAACAC...CCTCCCCGACCCAGCGCCTAAGCTCACAGAGTGTCGTCGCCCACCTCCCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp AGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCGCCATGAGCCCCAGGTaGAGGCCGCTGAACATGCCC +
Preference number: 5 (lower is better)
Translates to: RNGVSPWWPDCQSGTPDLAMSPR*RPLNMP
Trigger: GGGCATGTTCAGCGGCCTCAACCTGGGGCTCATGGC...GAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGAACAGCAGCAAGCTATaGGTGCACCACTCACCCCTC +
Preference number: 5 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWNSSKL*VHHSPL
Trigger: GAGGGGTGAGTGGTGCACCAATAGCTTGCTGCTGTT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS TCA 90 bp GCAGGCTGTGGTTGGCCTTACTGTGCGTCACACAGTTCTGTTCGTTaGGCAGGTTGGCTGTCTCGTCTGGCAACCCGTCATGCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: AGCGWPYCASHSSVR*AGWLSRLATRHAAP
Trigger: CGGAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGTGTGACGCACAGTAAGGCCAACCACAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS CCA 90 bp GCCATCTTTACTTTGGGTTCACAAGCGCCACAGCCAATCATAGGGTaGCTGCTCCAGCTGCGGCTTCATCCTTTCAACCCGGCGGCGCGA +
Preference number: 5 (lower is better)
Translates to: AIFTLGSQAPQPIIG*LLQLRLHPFNPAAR
Trigger: TCGCGCCGCCGGGTTGAAAGGATGAAGCCGCAGCTGGAGCAGCCACCCTATGATTGGCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 90 bp GCCAGAAGGGCAGCAGGAACTTCTTCTCTTCGCCTACGATCATCTTaGTGTCCTCGCCGTCGTGGTAAATCCAGGTGGTCTCGGCCCACG +
Preference number: 5 (lower is better)
Translates to: ARRAAGTSSLRLRSS*CPRRRGKSRWSRPT
Trigger: CGTGGGCCGAGACCACCTGGATTTACCACGACGGCGAGGACACCAAGATGATCGTAGGCGAAGAGAAGAAGTTCCTGCTGCCCTTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GCCACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTCCCGAGGTGCGGCGGTaGAGAATGATGTGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: ATTPSQLPPLFIPLYRHPPEVRR*RMMWGK
Trigger: CTTGCCCCACATCATTCTCAACCGCCGCACCTCGGG...AGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGCCCGAGGTGCGGCGGTaGAGAATGATGTGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWPEVRR*RMMWGK
Trigger: CTTGCCCCACATCATTCTCAACCGCCGCACCTCGGG...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAAGCAGGTCCACGATATaGGAGCGCTCCCCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQSRSTI*ERSPSN
Trigger: GTTTGAAGGGGAGCGCTCCAATATCGTGGACCTGCT...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGACACAGTTCTGTTCGTaGAGCAGGTTGGCTGTCTCG +
Preference number: 5 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWTQFCS*SRLAVS
Trigger: CGAGACAGCCAACCTGCTCAACGAACAGAACTGTGT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGAGACATGAGTGTTGTTaGAAGGGTCCTAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VPARVSHLPRITPGEPQGRHECC*KGPKLS
Trigger: GGAGAGCTTAGGACCCTTCAAACAACACTCATGTCT...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS CCA 90 bp ATCTCGATCTCGATGATGCCCGAGGTGCGGCGGTTGAGAATGATGTaGGGCAAGATGATGATGTCTGAGGTGCGGATGCCGCATCGCTGG +
Preference number: 5 (lower is better)
Translates to: ISISMMPEVRRLRMM*GKMMMSEVRMPHRW
Trigger: CCAGCGATGCGGCATCCGCACCTCAGACATCATCATCTTGCCCCACATCATTCTCAACCGCCGCACCTCGGGCATCATCGAGATCGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGACCACGTCTCGTTATaGATGTTCTGCCCGTACACC +
Preference number: 5 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQDHVSL*MFCPYT
Trigger: GGTGTACGGGCAGAACATCAATAACGAGACGTGGTC...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp AGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCTCGCCTACGATCATCTaGGTGTCCTCGCCGTCGTGG +
Preference number: 5 (lower is better)
Translates to: RNGVSPWWPDCQSGTPDLSPTII*VSSPSW
Trigger: CCACGACGGCGAGGACACCAAGATGATCGTAGGCGA...GAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp ACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCAAGTGAGCTCCAGCGCCCCTaGGATGATGTTCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TGFHHGGQTVSLELLTSSELQRP*DDVQLL
Trigger: GAGGAGCTGAACATCATCCAAGGGGCGCTGGAGCTC...ACTTGAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAACACAGTTCTGTTCGTaGAGCAGGTTGGCTGTCTCG +
Preference number: 5 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQTQFCS*SRLAVS
Trigger: CGAGACAGCCAACCTGCTCAACGAACAGAACTGTGT...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GGCCTGCTCTTGCTTGGAGCCCCAGAGAACAAGGTGAGCACCTTCCTGTGCCAGAAGGGCACAAGGTCTTaGGTCTCAGGATGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: GLLLLGAPENKVSTFLCQKGTRS*VSGCCR
Trigger: CCTGCAACATCCTGAGACCAAAGACCTTGTGCCCTT...CTGGCACAGGAAGGTGCTCACCTTGTTCTCTGGGGCTCCAAGCAAGAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAAGGGAAGGGGAGGAGCTaGCACTCCACATCACGTGTT +
Preference number: 5 (lower is better)
Translates to: VLERPCPQGRRPASILIQGKGRS*HSTSRV
Trigger: AACACGTGATGTGGAGTGCAAGCTCCTCCCCTTCCC...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGGGGAGGAGGGACAGTaGGCTCCCTGGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SIWAESVHLQNLERHAPAGEEGQ*APWEEE
Trigger: CTCCTCCTCCCAGGGAGCCAACTGTCCCTCCTCCCC...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGAAAGCAGGGTCTTACTaGAGGGCCAAGGCAATGTTG +
Preference number: 5 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWKAGSY*RAKAML
Trigger: CAACATTGCCTTGGCCCTCAAGTAAGACCCTGCTTT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAACCCGCCATCTTTACTTaGGGTTCACAAGCGCCACAG +
Preference number: 5 (lower is better)
Translates to: VLERPCPQGRRPASILIQPAIFT*GSQAPQ
Trigger: CTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGG...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp AAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTGCCATGAGCCCCAGGTaGAGGCCGCTGAACATGCCC +
Preference number: 5 (lower is better)
Translates to: KCLLGTQYRVQLEGPTRFAMSPR*RPLNMP
Trigger: GGGCATGTTCAGCGGCCTCAACCTGGGGCTCATGGC...AAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGTGGAGGAGCGAAGAATaGAGCTGGTTATTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLWRSEE*SWLLLL
Trigger: GAGCAGCAATAACCAGCTCAATTCTTCGCTCCTCCA...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGACAGTGATGACAGACTaGGCAGGTTCTGCAGTAACA +
Preference number: 5 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWTVMTD*AGSAVT
Trigger: TGTTACTGCAGAACCTGCCAAGTCTGTCATCACTGT...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATGGGGAGGAGGGACAGTaGGCTCCCTGGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: NQFISKILNAMPRLPTSHGEEGQ*APWEEE
Trigger: CTCCTCCTCCCAGGGAGCCAACTGTCCCTCCTCCCC...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GAAGGTCCCCAGCCTAGGATGGTGGGAGGAAAGCTGCTCCCTACTCTATGCAGTAGCATGGGCTACGCTTaGCTTTGTTGCAAGGACCCC +
Preference number: 5 (lower is better)
Translates to: EGPQPRMVGGKLLPTLCSSMGYA*LCCKDP
Trigger: GGGGTCCTTGCAACAAAGCAAAGCGTAGCCCATGCT...ACTGCATAGAGTAGGGAGCAGCTTTCCTCCCACCATCCTAGGCTGGGGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGCCTTGGGCAGAGGAATaGCCCAGTACATTCATTCAT +
Preference number: 5 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWPWAEE*PSTFIH
Trigger: ATGAATGAATGTACTGGGCAATTCCTCTGCCCAAGG...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAGGTCTTTGGAGAAGTATGCTCTACTaGCGTTGCTTTAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: FLPHCPPPRLLGRAQGLWRSMLY*RCFRAG
Trigger: TCCTGCCCTAAAGCAACGCAAGTAGAGCATACTTCT...CCAAAGACCTTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS TCA 90 bp GGTGTGACGGCGTCAATCCGGTCGCTTCGACTGAGAGAGTCTGAGTaGTTCAAGCCACATGGGCGAGGAGGGGACTTATTTTCACCTGGA +
Preference number: 5 (lower is better)
Translates to: GVTASIRSLRLRESE*FKPHGRGGDLFSPG
Trigger: TCCAGGTGAAAATAAGTCCCCTCCTCGCCCATGTGGCTTGAATCACTCAGACTCTCTCAGTCGAAGCGACCGGATTGACGCCGTCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369878.9
ENST00000433628.2
ENST00000475511.1
CDS GCA 90 bp CTGAACATGCCCGACAGGCACAGCAGCAGCGAAATGAAGATCACCTaGAGCCAGAAGGGCAGCAGGAACTTCTTCTCTTCGCCTACGATC +
Preference number: 5 (lower is better)
Translates to: LNMPDRHSSSEMKIT*SQKGSRNFFSSPTI
Trigger: GATCGTAGGCGAAGAGAAGAAGTTCCTGCTGCCCTTCTGGCTGCAGGTGATCTTCATTTCGCTGCTGCTGTGCCTGTCGGGCATGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp AGAAACGGGGTTTCACCATGGTGGCCAGACTGTCAGTCTGGAACTCCTGACCTCCCCGCCATCTTTACTTaGGGTTCACAAGCGCCACAG +
Preference number: 5 (lower is better)
Translates to: RNGVSPWWPDCQSGTPDLPAIFT*GSQAPQ
Trigger: CTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGG...GAGGTCAGGAGTTCCAGACTGACAGTCTGGCCACCATGGTGAAACCCCGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAATCTTGCGTAGCGGTTaGATCTCGATCTCGATGATG +
Preference number: 5 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQILRSG*ISISMM
Trigger: CATCATCGAGATCGAGATCAAACCGCTACGCAAGAT...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp TCGTTTCCATTCCTCCCTCACTGTCCTCCTCCGCGGCTCCTGGGAAGGGCACAAAAAGGCAGAAAAATCTaGCTTTCGTTCCCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SFPFLPHCPPPRLLGRAQKGRKI*LSFPVS
Trigger: GCTCACCGGGAACGAAAGCAAGATTTTTCTGCCTTT...TTGTGCCCTTCCCAGGAGCCGCGGAGGAGGACAGTGAGGGAGGAATGGAAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTTCCCACGGGGGCAGGTaGCGTGCCAGTAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSSHGGR*RASSRP
Trigger: TGGCCTGCTACTGGCACGCAACCTGCCCCCGTGGGA...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTGCCAGCCCGGGTGAGTCATCTGCCTAGGATCACCCCTGGGGAACCACAGGGGTGTATGATTTTGAATTaGCCTGACGCATATGGGACA +
Preference number: 5 (lower is better)
Translates to: VPARVSHLPRITPGEPQGCMILN*PDAYGT
Trigger: TGTCCCATATGCGTCAGGCAAATTCAAAATCATACA...CCCCTGTGGTTCCCCAGGGGTGATCCTAGGCAGATGACTCACCCGGGCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGCCAGGCAACCCCTTCTaGGTTGCTAGACTGAACTCC +
Preference number: 5 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWPGNPF*VARLNS
Trigger: GGAGTTCAGTCTAGCAACCAAGAAGGGGTTGCCTGG...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS TCA 90 bp TGTTGGTGTGACGGCGTCAATCCGGTCGCTTCGACTGAGAGAGTCTaGGTGATTCAAGCCACATGGGCGAGGAGGGGACTTATTTTCACC +
Preference number: 5 (lower is better)
Translates to: CWCDGVNPVASTERV*VIQATWARRGLIFT
Trigger: GGTGAAAATAAGTCCCCTCCTCGCCCATGTGGCTTGAATCACTCAGACTCTCTCAGTCGAAGCGACCGGATTGACGCCGTCACACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369878.9
ENST00000433628.2
ENST00000475511.1
CDS-3UTR CAA 90 bp CCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGAGCAGGTCCACGATATaGGAGCGCTCCCCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: PRPANCHPFLSLCIDILESRSTI*ERSPSN
Trigger: GTTTGAAGGGGAGCGCTCCAATATCGTGGACCTGCT...CTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp GGCCAAGGAAGGCTACCGGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGAGCATAGCGTCCAACTaGGTGTCATTGAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: GQGRLPEGQVQPIRVTSWSIASN*VSLKTK
Trigger: CTTTGTTTTCAATGACACCAAGTTGGACGCTATGCT...CCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCCGGTAGCCTTCCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCTTGTGCAGGCTGTGGTaGGCCTTACTGTGCGTCACA +
Preference number: 5 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPLCRLW*ALLCVT
Trigger: TGTGACGCACAGTAAGGCCAACCACAGCCTGCACAA...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGAATGATACACAACTTTaGGGAGGCCCTGAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLNDTQL*GGPESE
Trigger: TTCACTCTCAGGGCCTCCCAAAAGTTGTGTATCATT...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTCCCTGCTGGGTTTCCTaGGGCAGAGGAATTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SIWAESVHLQNLERHAPAPCWVS*GRGIAQ
Trigger: CTGGGCAATTCCTCTGCCCAAGGAAACCCAGCAGGG...AGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GCCACCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTTTGCTCTTCTCCATCTaGCGTAGCGGTTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: ATTPSQLPPLFIPLYRHPLLFSI*RSGLIS
Trigger: CGAGATCAAACCGCTACGCAAGATGGAGAAGAGCAA...AGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGTTGCTCTTCTCCATCTaGCGTAGCGGTTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWLLFSI*RSGLIS
Trigger: CGAGATCAAACCGCTACGCAAGATGGAGAAGAGCAA...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp AATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCCGGCTGCCAACTTCACATTCGCCTACGATCATCTaGGTGTCCTCGCCGTCGTGG +
Preference number: 5 (lower is better)
Translates to: NQFISKILNAMPRLPTSHSPTII*VSSPSW
Trigger: CCACGACGGCGAGGACACCAAGATGATCGTAGGCGA...ATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAACTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGGCCATGAGCCCCAGGTaGAGGCCGCTGAACATGCCC +
Preference number: 5 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLAMSPR*RPLNMP
Trigger: GGGCATGTTCAGCGGCCTCAACCTGGGGCTCATGGC...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTGAGCTCCAGCGCCCCTaGGATGATGTTCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ALWGMRILRPHSSQLCSAELQRP*DDVQLL
Trigger: GAGGAGCTGAACATCATCCAAGGGGCGCTGGAGCTC...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTTGTTCGTTGAGCAGGTaGGCTGTCTCGTCTGGCAAC +
Preference number: 5 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVCSLSR*AVSSGN
Trigger: GTTGCCAGACGAGACAGCCAACCTGCTCAACGAACA...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGAAGGGCACAAGGTCTTaGGTCTCAGGATGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSKGTRS*VSGCCR
Trigger: CCTGCAACATCCTGAGACCAAAGACCTTGTGCCCTT...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTGGGCTACGCTTTGCTTaGTTGCAAGGACCCCTCATC +
Preference number: 5 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVGLRFA*LQGPLI
Trigger: GATGAGGGGTCCTTGCAACAAAGCAAAGCGTAGCCC...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTACACTCCCTTCCACACTaGAAAAGGTCACCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLHSLPH*KRSPPR
Trigger: CCGCGGCGGTGACCTTTTCAAGTGTGGAAGGGAGTG...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCCGACCACGTCTCGTTATaGATGTTCTGCCCGTACACC +
Preference number: 5 (lower is better)
Translates to: PSQLPPLFIPLYRHPRVADHVSL*MFCPYT
Trigger: GGTGTACGGGCAGAACATCAATAACGAGACGTGGTC...GGCAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGAGTTCCTGGATGACATaGGGGTGCTTTAGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSSSWMT*GCFSSL
Trigger: AAGGCTGCTAAAGCACCCCAATGTCATCCAGGAACT...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAATTCATCTCCAAAATCTaGAACGCCATGCCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQFISKI*NAMPRL
Trigger: CAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAA...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTCATCACACTGGTGTaGTGCTCAGTGAGAGGCATC +
Preference number: 5 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQLITLV*CSVRGI
Trigger: GATGCCTCTCACTGAGCACAACACCAGTGTGATGAG...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTCACTTCAACATGGCATaGAACTCCCTGCAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSHFNMA*NSLQGV
Trigger: CACTCCCTGCAGGGAGTTCAATGCCATGTTGAAGTG...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAGCCCCACCAGGCCCATaGGATAGTTCTCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLAPPGP*DSSLQG
Trigger: ACCCTGAAGAGAACTATCCAATGGGCCTGGTGGGGC...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGAGAGCACGATCCTCTTaGGAATGTAAAATAGAGACT +
Preference number: 5 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLRARSS*ECKIET
Trigger: AGTCTCTATTTTACATTCCAAAGAGGATCGTGCTCT...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTACTTGAGAGGCCCTGCCCACAAGGTAGGAGACCTGCCTCCATCCTCATCCAATCTCTATCACTGGCTTaGCACAGAAGTATGCTCTAC +
Preference number: 5 (lower is better)
Translates to: VLERPCPQGRRPASILIQSLSLA*HRSMLY
Trigger: GTAGAGCATACTTCTGTGCAAAGCCAGTGATAGAGA...TTGGATGAGGATGGAGGCAGGTCTCCTACCTTGTGGGCAGGGCCTCTCAAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS CCA 90 bp GTGCGTCACACAGTTCTGTTCGTTGAGCAGGTTGGCTGTCTCGTCTaGCAACCCGTCATGCAGCTCCGTAAGAGTCAATTCGATTTTAGT +
Preference number: 5 (lower is better)
Translates to: VRHTVLFVEQVGCLV*QPVMQLRKSQFDFS
Trigger: ACTAAAATCGAATTGACTCTTACGGAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGTGTGACGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAGAATTGAGCTGGTTATaGCTGCTCCCCAGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQELSWL*LLPSVG
Trigger: ACCAACACTGGGGAGCAGCAATAACCAGCTCAATTC...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTATGTTCGTTGAGCAGGTaGGCTGTCTCGTCTGGCAAC +
Preference number: 5 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLCSLSR*AVSSGN
Trigger: GTTGCCAGACGAGACAGCCAACCTGCTCAACGAACA...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCGGGAAGGGGAGGAGCTaGCACTCCACATCACGTGTT +
Preference number: 5 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCGKGRS*HSTSRV
Trigger: AACACGTGATGTGGAGTGCAAGCTCCTCCCCTTCCC...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAACAGTAGATTCAGACTaGGGGAGTAATGATCAGAAG +
Preference number: 5 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSTVDSD*GSNDQK
Trigger: CTTCTGATCATTACTCCCCAAGTCTGAATCTACTGT...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTCCTAGAACCATCCCTTaGTCCTGGGACTGCTTGAAA +
Preference number: 5 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVPRTIP*SWDCLK
Trigger: TTTCAAGCAGTCCCAGGACAAAGGGATGGTTCTAGG...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TGCCACCAGGGAGCTTGGGTCATGCTACATAGCGTGCAAAGCCAGCCCTCCCTGAGAGTTATCTTTGACTaGAGTGTGTGGGTATCTTTA +
Preference number: 5 (lower is better)
Translates to: CHQGAWVMLHSVQSQPSLRVIFD*SVWVSL
Trigger: TAAAGATACCCACACACTCAAGTCAAAGATAACTCT...CAGGGAGGGCTGGCTTTGCACGCTATGTAGCATGACCCAAGCTCCCTGGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp AGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAGACCACGTCTCGTTATaGATGTTCTGCCCGTACACC +
Preference number: 5 (lower is better)
Translates to: SPSGSHHGITAEFRQNNLDHVSL*MFCPYT
Trigger: GGTGTACGGGCAGAACATCAATAACGAGACGTGGTC...TAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCCATCTTGCGTAGCGGTTaGATCTCGATCTCGATGATG +
Preference number: 5 (lower is better)
Translates to: PSQLPPLFIPLYRHPRVAILRSG*ISISMM
Trigger: CATCATCGAGATCGAGATCAAACCGCTACGCAAGAT...GGCAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGGCAGAAAAATCTaGCTTTCGTTCCCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVKGRKI*LSFPVS
Trigger: GCTCACCGGGAACGAAAGCAAGATTTTTCTGCCTTT...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTCGGGCACTGATAATCTaGTGTGTACACTGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVRALII*CVHWSV
Trigger: TACTGACCAGTGTACACACAAGATTATCAGTGCCCG...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp ATTCTCCTGCTGCCCCAAAGAAGCAACAGCCCAGTGTTTCTCCTCCAACCATCTCTACTTGTCACAGCCTaGCTAAGTAACAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: ILLLPQRSNSPVFLLQPSLLVTA*LSNSSK
Trigger: CTTGCTGCTGTTACTTAGCAAGGCTGTGACAAGTAG...AGATGGTTGGAGGAGAAACACTGGGCTGTTGCTTCTTTGGGGCAGCAGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TTCTGCAGTAACACGGTCTTCTTCATTCAGCCAGCGAGATCGACGGTGATGCCCTCATTCTTCCCAACTTaGCTCTGCTCTAGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: FCSNTVFFIQPARSTVMPSFFPT*LCSRSL
Trigger: CAGACTTCTAGAGCAGAGCAAAGTTGGGAAGAATGA...GGGCATCACCGTCGATCTCGCTGGCTGAATGAAGAAGACCGTGTTACTGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp ATCCTTGCAAAGAAGGACACCTTCCCCCTAGGATTGGCTGTACCAGGCTGTGACAATGTCTGGGGCAATTaGACTGGATACTCCGAATGT +
Preference number: 5 (lower is better)
Translates to: ILAKKDTFPLGLAVPGCDNVWGN*TGYSEC
Trigger: ACATTCGGAGTATCCAGTCAAATTGCCCCAGACATT...GTCACAGCCTGGTACAGCCAATCCTAGGGGGAAGGTGTCCTTCTTTGCAAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTCCGGATGTTTTCCACTaGAAAGTGACTATCCATGCC +
Preference number: 5 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVPDVFH*KVTIHA
Trigger: GGCATGGATAGTCACTTTCAAGTGGAAAACATCCGG...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTCTCAGAAGTGCCGAGTaGAAAAACGGCTCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: ALWGMRILRPHSSQLCSALRSAE*KNGSRE
Trigger: CTCCCTAGAGCCGTTTTTCAACTCGGCACTTCTGAG...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGCCCGCCATCTTTACTTaGGGTTCACAAGCGCCACAG +
Preference number: 5 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKPAIFT*GSQAPQ
Trigger: CTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGG...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CCACGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGAGCATAGCGTCCAACTaGGTGTCATTGAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: PRPANCHPFLSLCIDILESIASN*VSLKTK
Trigger: CTTTGTTTTCAATGACACCAAGTTGGACGCTATGCT...CTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCTTGTGCAGGCTGTGGTaGGCCTTACTGTGCGTCACA +
Preference number: 5 (lower is better)
Translates to: MILFGRNQFISKILNAMPLCRLW*ALLCVT
Trigger: TGTGACGCACAGTAAGGCCAACCACAGCCTGCACAA...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCTTCATCTCCAAAATCTaGAACGCCATGCCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCFISKI*NAMPRL
Trigger: CAGCCGGGGCATGGCGTTCAAGATTTTGGAGATGAA...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAGTCAACTTGCCTCTaGCCAATGATAAACCATGGG +
Preference number: 5 (lower is better)
Translates to: PSRHTVQSAARRSDSFSVKSTCL*PMINHG
Trigger: CCCATGGTTTATCATTGGCAAGAGGCAAGTTGACTT...AACAGAAAACGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CTAGAAATGCCTTCTCGGCACACAGTACAGAGTGCAGCTAGAAGGTCCGACTCGCAGGATGAAGTCAACTaGCCTCTTGCCAATGATAAA +
Preference number: 5 (lower is better)
Translates to: LEMPSRHTVQSAARRSDSQDEVN*PLANDK
Trigger: TTTATCATTGGCAAGAGGCAAGTTGACTTCATCCTG...CGAGTCGGACCTTCTAGCTGCACTCTGTACTGTGTGCCGAGAAGGCATTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GGAGGGGCAAGTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAAAAATGAATACGAACTaGGCGGCTAAAATTTCATCC +
Preference number: 5 (lower is better)
Translates to: GGASPAHQGHIMGSQQSSKMNTN*AAKISS
Trigger: GGATGAAATTTTAGCCGCCAAGTTCGTATTCATTTT...TGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGACTTGCCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAAACCCAAAGAGAGAATTaGAGGGCAGAAGTTCATGGT +
Preference number: 5 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQTQREN*RAEVHG
Trigger: ACCATGAACTTCTGCCCTCAAATTCTCTCTTTGGGT...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAAGGCAGGACACAGACTaGATCAGCCAGGGCCTATAC +
Preference number: 5 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPRQDTD*ISQGLY
Trigger: GTATAGGCCCTGGCTGATCAAGTCTGTGTCCTGCCT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTATTTCATGGAGGTACTaGAGAGGCCCTGCCCACAAG +
Preference number: 5 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSISWRY*RGPAHK
Trigger: CTTGTGGGCAGGGCCTCTCAAGTACCTCCATGAAAT...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTTGGGGAGTAGCTACTTaGCTCTGCCTGCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSWGVAT*LCLLSE
Trigger: CTCAGAAAGCAGGCAGAGCAAAGTAGCTACTCCCCA...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS TCA 90 bp ACTTATTTTCACCTGGAGAACCTGCTGCTAACAACTCTGTTCTGCTaGCAACAAAGGTACGAGACAGGGACAAAGGAACTGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TYFHLENLLLTTLFC*QQRYETGTKELERL
Trigger: CAGCCTCTCCAGTTCCTTTGTCCCTGTCTCGTACCTTTGTTGTCAGCAGAACAGAGTTGTTAGCAGCAGGTTCTCCAGGTGAAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS GCA 90 bp TTCTGTTCGTTGAGCAGGTTGGCTGTCTCGTCTGGCAACCCGTCATaGAGCTCCGTAAGAGTCAATTCGATTTTAGTGTTTTCACTGTCT +
Preference number: 5 (lower is better)
Translates to: FCSLSRLAVSSGNPS*SSVRVNSILVFSLS
Trigger: AGACAGTGAAAACACTAAAATCGAATTGACTCTTACGGAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTAGAGCTCCAGCGCCCCTaGGATGATGTTCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLELQRP*DDVQLL
Trigger: GAGGAGCTGAACATCATCCAAGGGGCGCTGGAGCTC...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp CAGGATGTTGCAGGGTACAGCATGGCGGACAAGCTCACACCAGTGAAGTCATGGGGAAAAGATAAAGATTaGCAAATGACCCTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: QDVAGYSMADKLTPVKSWGKDKD*QMTLRY
Trigger: ATACCTCAGGGTCATTTGCAAATCTTTATCTTTTCC...CCATGACTTCACTGGTGTGAGCTTGTCCGCCATGCTGTACCCTGCAACATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAATTGTCCTGGGACTGCTaGAAAATAAGAGCACAGATA +
Preference number: 5 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQLSWDC*KIRAQI
Trigger: TATCTGTGCTCTTATTTTCAAGCAGTCCCAGGACAA...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCCCGAGGTGCGGCGGTaGAGAATGATGTGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFPEVRR*RMMWGK
Trigger: CTTGCCCCACATCATTCTCAACCGCCGCACCTCGGG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTATCTTGCGTAGCGGTTaGATCTCGATCTCGATGATG +
Preference number: 5 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSILRSG*ISISMM
Trigger: CATCATCGAGATCGAGATCAAACCGCTACGCAAGAT...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCATTGCTCTTCTCCATCTaGCGTAGCGGTTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPLLFSI*RSGLIS
Trigger: CGAGATCAAACCGCTACGCAAGATGGAGAAGAGCAA...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGCATGCTTCTACTTCTGTaGCTAGGAAACGGTGCATGG +
Preference number: 5 (lower is better)
Translates to: GSHHGITAEFRQNNLKLCMLLLL*LGNGAW
Trigger: CCATGCACCGTTTCCTAGCAACAGAAGTAGAAGCAT...GCAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAAGTTCCTGGATGACATaGGGGTGCTTTAGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPSSWMT*GCFSSL
Trigger: AAGGCTGCTAAAGCACCCCAATGTCATCCAGGAACT...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp ATGATTCTATTTGGGCGGAATCAGTTCATCTCCAAAATCTTGAACGCCATGCCCTGGAGGAGCGAAGAATaGAGCTGGTTATTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: MILFGRNQFISKILNAMPWRSEE*SWLLLL
Trigger: GAGCAGCAATAACCAGCTCAATTCTTCGCTCCTCCA...GGGCATGGCGTTCAAGATTTTGGAGATGAACTGATTCCGCCCAAATAGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GCTCTCTGGGGAATGAGAATCCTAAGACCTCATTCTTCCCAACTTTGCTCTGCTAAGTCAACTTGCCTCTaGCCAATGATAAACCATGGG +
Preference number: 5 (lower is better)
Translates to: ALWGMRILRPHSSQLCSAKSTCL*PMINHG
Trigger: CCCATGGTTTATCATTGGCAAGAGGCAAGTTGACTT...AGCAGAGCAAAGTTGGGAAGAATGAGGTCTTAGGATTCTCATTCCCCAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTCCTACCAGCTCAGTCTaGTATTTCTCCTCAACCCTT +
Preference number: 5 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSPTSSV*YFSSTL
Trigger: AAGGGTTGAGGAGAAATACAAGACTGAGCTGGTAGG...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAATTCGCATCCGTAGGGTaGACCAGGGACTCTAGAATA +
Preference number: 5 (lower is better)
Translates to: YYRTCISVGYIAVAHATQFASVG*TRDSRI
Trigger: TATTCTAGAGTCCCTGGTCAACCCTACGGATGCGAA...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CGCCCAGCCAACTGCCACCCCTTTTTATCCCTCTGTATAGACATCCTAGAGTTGCAGTGTTGGTATGATTaGGGTTTCTTGTTTGTGTGT +
Preference number: 5 (lower is better)
Translates to: RPANCHPFLSLCIDILELQCWYD*GFLFVC
Trigger: ACACACAAACAAGAAACCCAAATCATACCAACACTG...CAACTCTAGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369875.3
CDS-3UTR CAA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTAAGCAGGTCCACGATATaGGAGCGCTCCCCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLSRSTI*ERSPSN
Trigger: GTTTGAAGGGGAGCGCTCCAATATCGTGGACCTGCT...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGACAGTGATGACAGACTaGGCAGGTTCTGCAGTAACA +
Preference number: 5 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLTVMTD*AGSAVT
Trigger: TGTTACTGCAGAACCTGCCAAGTCTGTCATCACTGT...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GTCCAGCCCATCAGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAATATTTTCTTCCATTCTaGTCATTGGTCAATAGGGGA +
Preference number: 5 (lower is better)
Translates to: VQPIRVTSWDHSRVQTEQYFLPF*SLVNRG
Trigger: TCCCCTATTGACCAATGACAAGAATGGAAGAAAATA...TTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCTGATGGGCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TACTACAGAACATGCATTAGTGTGGGCTATATAGCTGTGGCTCATGCTACCCAAGGCCACAACACACATTaGGTTTCTGAATCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: YYRTCISVGYIAVAHATQGHNTH*VSESLF
Trigger: AAACAGGGATTCAGAAACCAAATGTGTGTTGTGGCC...TTGGGTAGCATGAGCCACAGCTATATAGCCCACACTAATGCATGTTCTGTAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTAGATGGAGTCTCCTCTaGCCACCCGGAACCGCACAT +
Preference number: 5 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFRWSLL*PPGTAH
Trigger: ATGTGCGGTTCCGGGTGGCAAGAGGAGACTCCATCT...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp AGGGTCACATCATGGGATCACAGCAGAGTTCAGACAGAACAACTTAAAACTCTGAGCATAGCGTCCAACTaGGTGTCATTGAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: RVTSWDHSRVQTEQLKTLSIASN*VSLKTK
Trigger: CTTTGTTTTCAATGACACCAAGTTGGACGCTATGCT...CAGAGTTTTAAGTTGTTCTGTCTGAACTCTGCTGTGATCCCATGATGTGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp AGTGCAGCTAGAAGGTCCGACTCGTTTTCTGTTAAAGTATGTTCTAGTGGGAAGCAGGATGAAGTCAACTaGCCTCTTGCCAATGATAAA +
Preference number: 5 (lower is better)
Translates to: SAARRSDSFSVKVCSSGKQDEVN*PLANDK
Trigger: TTTATCATTGGCAAGAGGCAAGTTGACTTCATCCTG...CTTCCCACTAGAACATACTTTAACAGAAAACGAGTCGGACCTTCTAGCTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp ACCTGGATTTCTCAACCATTTTTCCCTGTCCTCACACACAATGTCTTCATCCCAGTCTGTCTCACTACTTaGGACTTATATGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: TWISQPFFPVLTHNVFIPVCLTT*DLYGFR
Trigger: TCTGAAGCCATATAAGTCCAAAGTAGTGAGACAGAC...TGGGATGAAGACATTGTGTGTGAGGACAGGGAAAAATGGTTGAGAAATCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTTTCACAGAAAGATTTTaGGAACAGGACTGTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSFTERF*EQDCEV
Trigger: CACTTCACAGTCCTGTTCCAAAAATCTTTCTGTGAA...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTAGTTTTCAAGAGCCAATaGAGAGGCCTGAATGAGACC +
Preference number: 5 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLVFKSQ*RGLNET
Trigger: GGTCTCATTCAGGCCTCTCAATTGGCTCTTGAAAAC...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTTTTCTAACGGTGACTTaGACCTATTCTGTAGTACAA +
Preference number: 5 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSFLTVT*TYSVVQ
Trigger: TTGTACTACAGAATAGGTCAAAGTCACCGTTAGAAA...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp CTGGCAATCCCCAAAGTTCCCTCCTTTAAAAACACGGGTCTAGAAATGCCTTCTATACTTGTTTTGGTTTaGTGTATCTGTACTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LAIPKVPSFKNTGLEMPSILVLV*CICTLC
Trigger: GCAGAGAGTACAGATACACAAAACCAAAACAAGTAT...AGAAGGCATTTCTAGACCCGTGTTTTTAAAGGAGGGAACTTTGGGGATTGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS TCA 90 bp CTGTCTGTCTGCTTAAAGGCAGAAAAATCTTGCTTTCGTTCCCGGTaGGCCACTTTCTTTTTCGTTCTGTTGTCAGTGTATAAATCTGTT +
Preference number: 5 (lower is better)
Translates to: LSVCLKAEKSCFRSR*ATFFFVLLSVYKSV
Trigger: AACAGATTTATACACTGACAACAGAACGAAAAAGAAAGTGGCTCACCGGGAACGAAAGCAAGATTTTTCTGCCTTTAAGCAGACAGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS-3UTR CAA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTACTAAAATTTCATCCTTaGGGAGCCTCACTGATGCCA +
Preference number: 5 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLLKFHP*GASLMP
Trigger: TGGCATCAGTGAGGCTCCCAAAGGATGAAATTTTAG...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp TTGCAAATGACCCTGAGGTATAAAAATCCACTGAGAAGTTGCTCATTGATACATCACCAAGAAACCACCTaGGAAATATTTCATGGAGGT +
Preference number: 5 (lower is better)
Translates to: LQMTLRYKNPLRSCSLIHHQETT*EIFHGG
Trigger: ACCTCCATGAAATATTTCCAAGGTGGTTTCTTGGTG...ATGTATCAATGAGCAACTTCTCAGTGGATTTTTATACCTCAGGGTCATTTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTCAAGATTTAAGCCAGTaGATTAGCACCCCGATATCT +
Preference number: 5 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFQDLSQ*ISTPIS
Trigger: AGATATCGGGGTGCTAATCAACTGGCTTAAATCTTG...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GGTGATAAAAATTCCTTAGGGTGGGAGCAAAATCACATTCCCAAGCAAATGTTACATTTCATCTCAAACTaGCTGACTCTGTTTAAGGAT +
Preference number: 5 (lower is better)
Translates to: GDKNSLGWEQNHIPKQMLHFISN*LTLFKD
Trigger: ATCCTTAAACAGAGTCAGCAAGTTTGAGATGAAATG...TAACATTTGCTTGGGAATGTGATTTTGCTCCCACCCTAAGGAATTTTTATCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS-3UTR CAA 90 bp GTTTTCTCTCTGTTGCCAGTAGTTAAGGAAGCTGAACTTAAAAGGTATACTTTTGTGCATTACATGGTATaGTATATCAGTGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: VFSLLPVVKEAELKRYTFVHYMV*YISGEM
Trigger: CATTTCTCCACTGATATACAATACCATGTAATGCAC...AAAAGTATACCTTTTAAGTTCAGCTTCCTTAACTACTGGCAACAGAGAGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS GCA 72 bp GCGGCGCGAGCGCAGGTACCGGCCCCTGGGCGAGACTaGAACGGAGCGTCCGCGGCCAGTGCTCAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: AARAQVPAPGRD*NGASAASAQQF
Trigger: GAACTGCTGAGCACTGGCCGCGGACGCTCCGTTGCAGTCTCGCCCAGGGGCCGGTACCTGCGCTCGCGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 72 bp TTTCAACCCGGCGGCGCGAGCGCAGGTACCGGCCCCTaGGCGAGACTGCAACGGAGCGTCCGCGGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: FQPGGASAGTGP*ARLQRSVRGQC
Trigger: GCACTGGCCGCGGACGCTCCGTTGCAGTCTCGCCCAGGGGCCGGTACCTGCGCTCGCGCCGCCGGGTTGAAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 72 bp CCGTGGACCCCGAGCCGCCGGCGCCCAGGGCGGGCGTaGAGAGCGACGTGCACAGGTAATAGGACTTGCTCT +
Preference number: 6 (lower is better)
Translates to: PWTPSRRRPGRA*RATCTGNRTCS
Trigger: AGAGCAAGTCCTATTACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCGCCGGCGGCTCGGGGTCCACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp GAGGCTGCGGCGCGCCGCCATCTTCCAAGTGGGCAGTaGGGCGGCTGCCTGCCCGCCCGCCATCTTTACTTT +
Preference number: 6 (lower is better)
Translates to: EAAARRHLPSGQ*GGCLPARHLYF
Trigger: AAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGGCGCGCCGCAGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp CCCGATGATCACCGTCTCCTCATTCTCGCCCACCGCTaGGCAGCCGCCCGCACCGCAGCAGCAGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: PDDHRLLILAHR*AAARTAAAAQQ
Trigger: CTGCTGAGCTGCTGCTGCGGTGCGGGCGGCTGCGCAGCGGTGGGCGAGAATGAGGAGACGGTGATCATCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 72 bp TCATCTTGGTGTCCTCGCCGTCGTGGTAAATCCAGGTaGTCTCGGCCCACGGGGGCGGCGGGAGCCCGGCCA +
Preference number: 6 (lower is better)
Translates to: SSWCPRRRGKSR*SRPTGAAGARP
Trigger: TGGCCGGGCTCCCGCCGCCCCCGTGGGCCGAGACCACCTGGATTTACCACGACGGCGAGGACACCAAGATGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp GCGCGCCGCCATCTTCCAAGTGGGCAGTGCGGCGGCTaGCTGCCCGCCCGCCATCTTTACTTTGGGTTCACA +
Preference number: 6 (lower is better)
Translates to: ARRHLPSGQCGG*LPARHLYFGFT
Trigger: TGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGGCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp GCACGTTGCCCAGCAGCAGTGAGCACAGCAGGTAGTTaGCCTGCCTGCGCACCGGCTCGATGCGCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: ARCPAAVSTAGS*PACAPARCAWR
Trigger: ACGCCAAGCGCATCGAGCCGGTGCGCAGGCAGGGCAACTACCTGCTGTGCTCACTGCTGCTGGGCAACGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp GCCGCCATCTTCCAAGTGGGCAGTGCGGCGGCTGCCTaGCCGCCCGCCATCTTTACTTTGGGTTCACAAGCG +
Preference number: 6 (lower is better)
Translates to: AAIFQVGSAAAA*PPAIFTLGSQA
Trigger: CGCTTGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp AGCCGCCGGCGCCCAGGGCGGGCGTGGAGAGCGACGTaGACAGGTAATAGGACTTGCTCTTCTCCATCTTGC +
Preference number: 6 (lower is better)
Translates to: SRRRPGRAWRAT*TGNRTCSSPSC
Trigger: GCAAGATGGAGAAGAGCAAGTCCTATTACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCGCCGGCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 72 bp GTCTCGTTATTGATGTTCTGCCCGTACACCCGCAGCTaGACCCGGGTCCGTTCGCTCACCCGCAGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: VSLLMFCPYTRS*TRVRSLTRSAP
Trigger: GGGGGCGCTGCGGGTGAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACGGGCAGAACATCAATAACGAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 90 bp CGCCGCTCGTGCTCGGTGAAGGCGATGCGGGACCACGTCTCGTTATaGATGTTCTGCCCGTACACCCGCAGCTTGACCCGGGTCCGTTCG +
Preference number: 6 (lower is better)
Translates to: RRSCSVKAMRDHVSL*MFCPYTRSLTRVRS
Trigger: CGAACGGACCCGGGTCAAGCTGCGGGTGTACGGGCAGAACATCAATAACGAGACGTGGTCCCGCATCGCCTTCACCGAGCACGAGCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS TCA 72 bp ACGACACGTCGTTCGTGTCCTCCAGTCGCAGCCCGATaGTCACCGTCTCCTCATTCTCGCCCACCGCTGCGC +
Preference number: 6 (lower is better)
Translates to: TTRRSCPPVAAR*SPSPHSRPPLR
Trigger: GCGCAGCGGTGGGCGAGAATGAGGAGACGGTGATCATCGGGCTGCGACTGGAGGACACGAACGACGTGTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 72 bp CAGTCCCGGAGTGGGGTCATCACGTCCTCCACCGTCTaGGTGCGGAGCTCCAGCGCCCCTTGGATGATGTTC +
Preference number: 6 (lower is better)
Translates to: QSRSGVITSSTV*VRSSSAPWMMF
Trigger: GAACATCATCCAAGGGGCGCTGGAGCTCCGCACCAAGACGGTGGAGGACGTGATGACCCCACTCCGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 90 bp CAAGTGGGCAGTGCGGCGGCTGCCTGCCCGCCCGCCATCTTTACTTaGGGTTCACAAGCGCCACAGCCAATCATAGGGTGGCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: QVGSAAAACPPAIFT*GSQAPQPIIGWLLQ
Trigger: CTGGAGCAGCCACCCTATGATTGGCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCACTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp ACAGCAGGTAGTTGCCCTGCCTGCGCACCGGCTCGATaGGCTTGGCGTAATTCTTCTCCTTCTCCGTGCCGC +
Preference number: 6 (lower is better)
Translates to: TAGSCPACAPAR*AWRNSSPSPCR
Trigger: GCGGCACGGAGAAGGAGAAGAATTACGCCAAGCGCATCGAGCCGGTGCGCAGGCAGGGCAACTACCTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 72 bp AGTGCGGCGGCTGCCTGCCCGCCCGCCATCTTTACTTaGGGTTCACAAGCGCCACAGCCAATCATAGGGTGG +
Preference number: 6 (lower is better)
Translates to: SAAAACPPAIFT*GSQAPQPIIGW
Trigger: CCACCCTATGATTGGCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS TCA 72 bp GCGGTTGAGAATGATGTGGGGCAAGATGATGATGTCTaGGGTGCGGATGCCGCATCGCTGGGGGCCGCTGTC +
Preference number: 6 (lower is better)
Translates to: AVENDVGQDDDV*GADAASLGAAV
Trigger: GACAGCGGCCCCCAGCGATGCGGCATCCGCACCTCAGACATCATCATCTTGCCCCACATCATTCTCAACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS TCA 72 bp GGGAGCAGATGGCCTGGGGCACGATCTCTCCGAAGATaGCGATACCGATGGTGGAGACTACCACGGCCACGA +
Preference number: 6 (lower is better)
Translates to: GSRWPGARSLRR*RYRWWRLPRPR
Trigger: TCGTGGCCGTGGTAGTCTCCACCATCGGTATCGTCATCTTCGGAGAGATCGTGCCCCAGGCCATCTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp AAGGCGATGCGGGACCACGTCTCGTTATTGATGTTCTaGCCGTACACCCGCAGCTTGACCCGGGTCCGTTCG +
Preference number: 6 (lower is better)
Translates to: KAMRDHVSLLMF*PYTRSLTRVRS
Trigger: CGAACGGACCCGGGTCAAGCTGCGGGTGTACGGGCAGAACATCAATAACGAGACGTGGTCCCGCATCGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp CCAGCAGCAGTGAGCACAGCAGGTAGTTGCCCTGCCTaGGCACCGGCTCGATGCGCTTGGCGTAATTCTTCT +
Preference number: 6 (lower is better)
Translates to: PAAVSTAGSCPA*APARCAWRNSS
Trigger: AGAAGAATTACGCCAAGCGCATCGAGCCGGTGCGCAGGCAGGGCAACTACCTGCTGTGCTCACTGCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 72 bp GGTAGTTGCCCTGCCTGCGCACCGGCTCGATGCGCTTaGCGTAATTCTTCTCCTTCTCCGTGCCGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: GSCPACAPARCA*RNSSPSPCRSS
Trigger: AGAACTGCGGCACGGAGAAGGAGAAGAATTACGCCAAGCGCATCGAGCCGGTGCGCAGGCAGGGCAACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 72 bp TGCTCGGTGAAGGCGATGCGGGACCACGTCTCGTTATaGATGTTCTGCCCGTACACCCGCAGCTTGACCCGG +
Preference number: 6 (lower is better)
Translates to: CSVKAMRDHVSL*MFCPYTRSLTR
Trigger: CCGGGTCAAGCTGCGGGTGTACGGGCAGAACATCAATAACGAGACGTGGTCCCGCATCGCCTTCACCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 90 bp TGCAGGCTGTGGTTGGCCTTACTGTGCGTCACACAGTTCTGTTCGTaGAGCAGGTTGGCTGTCTCGTCTGGCAACCCGTCATGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: CRLWLALLCVTQFCS*SRLAVSSGNPSCSS
Trigger: GGAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGTGTGACGCACAGTAAGGCCAACCACAGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS TCA 72 bp GACGGCGTCAATCCGGTCGCTTCGACTGAGAGAGTCTaGGTGATTCAAGCCACATGGGCGAGGAGGGGACTT +
Preference number: 6 (lower is better)
Translates to: DGVNPVASTERV*VIQATWARRGL
Trigger: AAGTCCCCTCCTCGCCCATGTGGCTTGAATCACTCAGACTCTCTCAGTCGAAGCGACCGGATTGACGCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369878.9
ENST00000433628.2
ENST00000475511.1
CDS CCA 72 bp TCGATGATGCCCGAGGTGCGGCGGTTGAGAATGATGTaGGGCAAGATGATGATGTCTGAGGTGCGGATGCCG +
Preference number: 6 (lower is better)
Translates to: SMMPEVRRLRMM*GKMMMSEVRMP
Trigger: CGGCATCCGCACCTCAGACATCATCATCTTGCCCCACATCATTCTCAACCGCCGCACCTCGGGCATCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp CCCGACAGGCACAGCAGCAGCGAAATGAAGATCACCTaGAGCCAGAAGGGCAGCAGGAACTTCTTCTCTTCG +
Preference number: 6 (lower is better)
Translates to: PDRHSSSEMKIT*SQKGSRNFFSS
Trigger: CGAAGAGAAGAAGTTCCTGCTGCCCTTCTGGCTGCAGGTGATCTTCATTTCGCTGCTGCTGTGCCTGTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp GCGCCTTCGTTGTGCAGGCTGTGGTTGGCCTTACTGTaGGTCACACAGTTCTGTTCGTTGAGCAGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: APSLCRLWLALL*VTQFCSLSRLA
Trigger: AGCCAACCTGCTCAACGAACAGAACTGTGTGACGCACAGTAAGGCCAACCACAGCCTGCACAACGAAGGCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS CCA 72 bp ACTTTGGGTTCACAAGCGCCACAGCCAATCATAGGGTaGCTGCTCCAGCTGCGGCTTCATCCTTTCAACCCG +
Preference number: 6 (lower is better)
Translates to: TLGSQAPQPIIG*LLQLRLHPFNP
Trigger: CGGGTTGAAAGGATGAAGCCGCAGCTGGAGCAGCCACCCTATGATTGGCTGTGGCGCTTGTGAACCCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 90 bp CGTAGCGGTTTGATCTCGATCTCGATGATGCCCGAGGTGCGGCGGTaGAGAATGATGTGGGGCAAGATGATGATGTCTGAGGTGCGGATG +
Preference number: 6 (lower is better)
Translates to: RSGLISISMMPEVRR*RMMWGKMMMSEVRM
Trigger: CATCCGCACCTCAGACATCATCATCTTGCCCCACATCATTCTCAACCGCCGCACCTCGGGCATCATCGAGATCGAGATCAAACCGCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CAA 90 bp TGGTTGGCCTTACTGTGCGTCACACAGTTCTGTTCGTTGAGCAGGTaGGCTGTCTCGTCTGGCAACCCGTCATGCAGCTCCGTAAGAGTC +
Preference number: 6 (lower is better)
Translates to: WLALLCVTQFCSLSR*AVSSGNPSCSSVRV
Trigger: GACTCTTACGGAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGTGTGACGCACAGTAAGGCCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS TCA 72 bp GGTTGGCCTTACTGTGCGTCACACAGTTCTGTTCGTTaGGCAGGTTGGCTGTCTCGTCTGGCAACCCGTCAT +
Preference number: 6 (lower is better)
Translates to: GWPYCASHSSVR*AGWLSRLATRH
Trigger: ATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGTGTGACGCACAGTAAGGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS CCA 72 bp CGAAGAATTGAGCTGGTTATTGCTGCTCCCCAGTGTTaGTGTGACGGCGTCAATCCGGTCGCTTCGACTGAG +
Preference number: 6 (lower is better)
Translates to: RRIELVIAAPQC*CDGVNPVASTE
Trigger: CTCAGTCGAAGCGACCGGATTGACGCCGTCACACCAACACTGGGGAGCAGCAATAACCAGCTCAATTCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369878.9
ENST00000433628.2
ENST00000475511.1
CDS CAA 72 bp TTACTGTGCGTCACACAGTTCTGTTCGTTGAGCAGGTaGGCTGTCTCGTCTGGCAACCCGTCATGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LLCVTQFCSLSR*AVSSGNPSCSS
Trigger: GGAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGTGTGACGCACAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS CAA 72 bp TGGTTGGCCTTACTGTGCGTCACACAGTTCTGTTCGTaGAGCAGGTTGGCTGTCTCGTCTGGCAACCCGTCA +
Preference number: 6 (lower is better)
Translates to: WLALLCVTQFCS*SRLAVSSGNPS
Trigger: TGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGTGTGACGCACAGTAAGGCCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS TCA 72 bp GCGTCAATCCGGTCGCTTCGACTGAGAGAGTCTGAGTaGTTCAAGCCACATGGGCGAGGAGGGGACTTATTT +
Preference number: 6 (lower is better)
Translates to: ASIRSLRLRESE*FKPHGRGGDLF
Trigger: AAATAAGTCCCCTCCTCGCCCATGTGGCTTGAATCACTCAGACTCTCTCAGTCGAAGCGACCGGATTGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369878.9
ENST00000433628.2
ENST00000475511.1
CDS CCA 72 bp GCAGCAGGAACTTCTTCTCTTCGCCTACGATCATCTTaGTGTCCTCGCCGTCGTGGTAAATCCAGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: AAGTSSLRLRSS*CPRRRGKSRWS
Trigger: AGACCACCTGGATTTACCACGACGGCGAGGACACCAAGATGATCGTAGGCGAAGAGAAGAAGTTCCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS CCA 72 bp ACAGTTCTGTTCGTTGAGCAGGTTGGCTGTCTCGTCTaGCAACCCGTCATGCAGCTCCGTAAGAGTCAATTC +
Preference number: 6 (lower is better)
Translates to: TVLFVEQVGCLV*QPVMQLRKSQF
Trigger: GAATTGACTCTTACGGAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS CAA 72 bp TTGATCTCGATCTCGATGATGCCCGAGGTGCGGCGGTaGAGAATGATGTGGGGCAAGATGATGATGTCTGAG +
Preference number: 6 (lower is better)
Translates to: LISISMMPEVRR*RMMWGKMMMSE
Trigger: CTCAGACATCATCATCTTGCCCCACATCATTCTCAACCGCCGCACCTCGGGCATCATCGAGATCGAGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369875.3
ENST00000369878.9
ENST00000433628.2
CDS TCA 72 bp CACCTGGAGAACCTGCTGCTAACAACTCTGTTCTGCTaGCAACAAAGGTACGAGACAGGGACAAAGGAACTG +
Preference number: 6 (lower is better)
Translates to: HLENLLLTTLFC*QQRYETGTKEL
Trigger: CAGTTCCTTTGTCCCTGTCTCGTACCTTTGTTGTCAGCAGAACAGAGTTGTTAGCAGCAGGTTCTCCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369878.9
CDS GCA 72 bp TTGAGCAGGTTGGCTGTCTCGTCTGGCAACCCGTCATaGAGCTCCGTAAGAGTCAATTCGATTTTAGTGTTT +
Preference number: 6 (lower is better)
Translates to: LSRLAVSSGNPS*SSVRVNSILVF
Trigger: AAACACTAAAATCGAATTGACTCTTACGGAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS GCA 72 bp TTGTCCATCCGGGATGCCATCAAGGCATTTTGGTATTaGTGTCTTGAGATCTTAACAAACTGCAGATCCGAA +
Preference number: 6 (lower is better)
Translates to: LSIRDAIKAFWY*CLEILTNCRSE
Trigger: TTCGGATCTGCAGTTTGTTAAGATCTCAAGACAGCAATACCAAAATGCCTTGATGGCATCCCGGATGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369878.9
ENST00000433628.2
ENST00000475511.1
CDS CAA 90 bp TTTAACCTTCATCTCACTGTCTGTCTGCTTAAAGGCAGAAAAATCTaGCTTTCGTTCCCGGTGAGCCACTTTCTTTTTCGTTCTGTTGTC +
Preference number: 6 (lower is better)
Translates to: FNLHLTVCLLKGRKI*LSFPVSHFLFRSVV
Trigger: GACAACAGAACGAAAAAGAAAGTGGCTCACCGGGAACGAAAGCAAGATTTTTCTGCCTTTAAGCAGACAGACAGTGAGATGAAGGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS TCA 72 bp TGCTTAAAGGCAGAAAAATCTTGCTTTCGTTCCCGGTaGGCCACTTTCTTTTTCGTTCTGTTGTCAGTGTAT +
Preference number: 6 (lower is better)
Translates to: CLKAEKSCFRSR*ATFFFVLLSVY
Trigger: ATACACTGACAACAGAACGAAAAAGAAAGTGGCTCACCGGGAACGAAAGCAAGATTTTTCTGCCTTTAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2
CDS CAA 90 bp GTTCTGTTGTCAGTGTATAAATCTGTTTCATCAAGAATCTCAGATTaGATGATTTCTTCAATCACATCTTCTAAGGTGACGATTCCCAGA +
Preference number: 6 (lower is better)
Translates to: VLLSVYKSVSSRISD*MISSITSSKVTIPR
Trigger: TCTGGGAATCGTCACCTTAGAAGATGTGATTGAAGAAATCATCAAATCTGAGATTCTTGATGAAACAGATTTATACACTGACAACAGAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369878.9
ENST00000433628.2