RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNNM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000119946

Ensembl transcript IDs: ENST00000356713.5, ENST00000488090.1

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGATGGAAGGGAAGGCAGAACATTCTGTCACCTGTGGGAGGCCTTaGGGGAAGCAGATGATGGGAGGGTGGATTCTCCCCCAAAGCTCT +
Preference number: 1 (lower is better)
Translates to: EMEGKAEHSVTCGRP*GKQMMGGWILPQSS
Trigger: AGAGCTTTGGGGGAGAATCCACCCTCCCATCATCTGCTTCCCCCAAGGCCTCCCACAGGTGACAGAATGTTCTGCCTTCCCTTCCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 90 bp AGGCAGAACATTCTGTCACCTGTGGGAGGCCTTGGGGGAAGCAGATaGTGGGAGGGTGGATTCTCCCCCAAAGCTCTGGAATTTCACACA +
Preference number: 1 (lower is better)
Translates to: RQNILSPVGGLGGSR*WEGGFSPKALEFHT
Trigger: TGTGTGAAATTCCAGAGCTTTGGGGGAGAATCCACCCTCCCATCATCTGCTTCCCCCAAGGCCTCCCACAGGTGACAGAATGTTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTaGAAGCAGGTATGCGCGGTCACTCTGCCATCTGGTGGTTATGCT +
Preference number: 1 (lower is better)
Translates to: HRARLCGCFSELFYS*KQVCAVTLPSGGYA
Trigger: AGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 90 bp TGGGGGTGTTGGTTGTACAATACTCTAGGGTGTGCCGAGAATTTCTaGGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAATT +
Preference number: 1 (lower is better)
Translates to: WGCWLYNTLGCAENF*GLPLLGGCQPSPSI
Trigger: AATTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGGCACACCCTAGAGTATTGTACAACCAACACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTaGCCCAACTTCAGGAGAAAAACCAGAGATCCAGTAAGTTCTTGG +
Preference number: 1 (lower is better)
Translates to: CAVTLPSGGYAWNCT*PNFRRKTRDPVSSW
Trigger: CCAAGAACTTACTGGATCTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp TTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCTGGTGGTTATaGTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGA +
Preference number: 1 (lower is better)
Translates to: FLEAGMRGHSAIWWL*LELHLPQLQEKNQR
Trigger: TCTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp GGACAAAGTTATGTGGGGGTGTTGGTTGTACAATACTCTAGGGTGTaGCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCC +
Preference number: 1 (lower is better)
Translates to: GQSYVGVLVVQYSRV*REFLRTSTSWWVPA
Trigger: GGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGGCACACCCTAGAGTATTGTACAACCAACACCCCCACATAACTTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp GTTCTGGAGGAAAGAATGGCAAGTTCCAAGACGATAGGTCTCCTATaGCATCAGGGGACCCAAAGAACAAAGAAGAGCATCAGGGGTCCC +
Preference number: 1 (lower is better)
Translates to: VLEERMASSKTIGLL*HQGTQRTKKSIRGP
Trigger: GGGACCCCTGATGCTCTTCTTTGTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATTCTTTCCTCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp GGAGGAAGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTaGGAATGGTTTGGAGATTTAGCAGACAGCACTCGATCAATGAGT +
Preference number: 1 (lower is better)
Translates to: GGRGGKLDGILRGKV*EWFGDLADSTRSMS
Trigger: ACTCATTGATCGAGTGCTGTCTGCTAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCTTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp AGAACAAAGAAGAGCATCAGGGGTCCCAGAGTGGCATTGTCAGCTTaGAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAAA +
Preference number: 1 (lower is better)
Translates to: RTKKSIRGPRVALSA*SQTSLFQSQTMLWK
Trigger: TTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTGACAATGCCACTCTGGGACCCCTGATGCTCTTCTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp CTTGAGGTTCCATCTCACATTCTTTCCATTCCAGCTGAGACATACTaGCCCAGGCTGCTGGAACCCTTATCTAACAGGAAACCAGTCACT +
Preference number: 1 (lower is better)
Translates to: LEVPSHILSIPAETY*PRLLEPLSNRKPVT
Trigger: AGTGACTGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGGAATGGAAAGAATGTGAGATGGAACCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp ACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCTaGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAA +
Preference number: 1 (lower is better)
Translates to: TVLFLEAGMRGHSAI*WLCLELHLPQLQEK
Trigger: TTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATaGTTTGGAGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTG +
Preference number: 1 (lower is better)
Translates to: RGGKLDGILRGKVWE*FGDLADSTRSMSSV
Trigger: CACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 90 bp GTTCAAAACTCACCATTTATTGGTTTGGGTCTAAGTACCCAACATTaGGGGCTGACACTTCGCCTGTTCCTACCAGGCAAGAGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: VQNSPFIGLGLSTQH*GLTLRLFLPGKSRC
Trigger: ACACCTGCTCTTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCCAAACCAATAAATGGTGAGTTTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp TTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTaGCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCA +
Preference number: 1 (lower is better)
Translates to: FQNCFILGSRYARSL*HLVVMLGIAPAPTS
Trigger: TGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp CTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATaGGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACC +
Preference number: 1 (lower is better)
Translates to: LCGCFSELFYSWKQV*AVTLPSGGYAWNCT
Trigger: GGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp CTGGAACCCTTATCTAACAGGAAACCAGTCACTAACAGTTTTCTGTaGTGTAATGTCAATCACGCGCCAACATGGCTGAGTCCCACTTCT +
Preference number: 1 (lower is better)
Translates to: LEPLSNRKPVTNSFL*CNVNHAPTWLSPTS
Trigger: AGAAGTGGGACTCAGCCATGTTGGCGCGTGATTGACATTACAGCACAGAAAACTGTTAGTGACTGGTTTCCTGTTAGATAAGGGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp CATCTCACATTCTTTCCATTCCAGCTGAGACATACTGCCCCAGGCTaGTGGAACCCTTATCTAACAGGAAACCAGTCACTAACAGTTTTC +
Preference number: 1 (lower is better)
Translates to: HLTFFPFQLRHTAPG*WNPYLTGNQSLTVF
Trigger: GAAAACTGTTAGTGACTGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGGAATGGAAAGAATGTGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp TCAGCTTGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTaGAAAAGACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTC +
Preference number: 1 (lower is better)
Translates to: SACSQTSLFQSQTML*KRPFLACSIRGTSF
Trigger: GAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp GTCACTAACAGTTTTCTGTGCTGTAATGTCAATCACGCGCCAACATaGCTGAGTCCCACTTCTTTAAAGCTCTGGGGGAAATTCTTGGTC +
Preference number: 1 (lower is better)
Translates to: VTNSFLCCNVNHAPT*LSPTSLKLWGKFLV
Trigger: GACCAAGAATTTCCCCCAGAGCTTTAAAGAAGTGGGACTCAGCCATGTTGGCGCGTGATTGACATTACAGCACAGAAAACTGTTAGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp CTCACATTCTTTCCATTCCAGCTGAGACATACTGCCCCAGGCTGCTaGAACCCTTATCTAACAGGAAACCAGTCACTAACAGTTTTCTGT +
Preference number: 1 (lower is better)
Translates to: LTFFPFQLRHTAPGC*NPYLTGNQSLTVFC
Trigger: ACAGAAAACTGTTAGTGACTGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGGAATGGAAAGAATGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp ACCTGCCCCAACTTCAGGAGAAAAACCAGAGATCCAGTAAGTTCTTaGAATAAAGTACACTCAGCTGATCTGCTAGGGTGTAGTAAGGGG +
Preference number: 1 (lower is better)
Translates to: TCPNFRRKTRDPVSS*NKVHSADLLGCSKG
Trigger: CCCCTTACTACACCCTAGCAGATCAGCTGAGTGTACTTTATTCCAAGAACTTACTGGATCTCTGGTTTTTCTCCTGAAGTTGGGGCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp AGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTaGAGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTAC +
Preference number: 1 (lower is better)
Translates to: REAGWYTTGKGLGMV*RFSRQHSINEFSEY
Trigger: GTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 90 bp TCTGCTCCCTGTTCCTTCTCTTCCAGAGCAGAATTATTGATCGATTaGAGACTGCTGATTGGGAGCCAAAACAGATGTGTCCCTGGTAAA +
Preference number: 1 (lower is better)
Translates to: SAPCSFSSRAELLID*RLLIGSQNRCVPGK
Trigger: TTTACCAGGGACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCTCTGGAAGAGAAGGAACAGGGAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp CTCCCACTGAAGTCCCATGAGATTATGTATCTTTCTTGGCTGACCTaGGCACTCTTTGGTTTGTCATGGCTAAACTTGCTTTCAGCACTT +
Preference number: 1 (lower is better)
Translates to: LPLKSHEIMYLSWLT*ALFGLSWLNLLSAL
Trigger: AAGTGCTGAAAGCAAGTTTAGCCATGACAAACCAAAGAGTGCCCAGGTCAGCCAAGAAAGATACATAATCTCATGGGACTTCAGTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp AGAAGCCTGCATGATGGTAGTTCTTGTTCAAAACTCACCATTTATTaGTTTGGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCT +
Preference number: 1 (lower is better)
Translates to: RSLHDGSSCSKLTIY*FGSKYPTLRADTSP
Trigger: AGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCCAAACCAATAAATGGTGAGTTTTGAACAAGAACTACCATCATGCAGGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 90 bp AGAATGATTCTTCAACATTCCTGTGTAACTCCCACTGAAGTCCCATaGGATTATGTATCTTTCTTGGCTGACCTGGGCACTCTTTGGTTT +
Preference number: 1 (lower is better)
Translates to: RMILQHSCVTPTEVP*DYVSFLADLGTLWF
Trigger: AAACCAAAGAGTGCCCAGGTCAGCCAAGAAAGATACATAATCTCATGGGACTTCAGTGGGAGTTACACAGGAATGTTGAAGAATCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 90 bp TTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTaGAGAAACGCTGGGCTGAAAGTTCCACTATTTAAAATAGTAGTG +
Preference number: 1 (lower is better)
Translates to: LKTCLELPSIHFTLH*RNAGLKVPLFKIVV
Trigger: CACTACTATTTTAAATAGTGGAACTTTCAGCCCAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 90 bp ATTATGTATCTTTCTTGGCTGACCTGGGCACTCTTTGGTTTGTCATaGCTAAACTTGCTTTCAGCACTTACAGTTTTTCCATGTAAGTTT +
Preference number: 1 (lower is better)
Translates to: IMYLSWLTWALFGLS*LNLLSALTVFPCKF
Trigger: AAACTTACATGGAAAAACTGTAAGTGCTGAAAGCAAGTTTAGCCATGACAAACCAAAGAGTGCCCAGGTCAGCCAAGAAAGATACATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR GCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACCTCCAGCCTCCCATGTaGCTGTCTGCCAATGGCACC +
Preference number: 2 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNLQPPM*LSANGT
Trigger: GGTGCCATTGGCAGACAGGCACATGGGAGGCTGGAG...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 90 bp CCACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTaGGAAGCAGGTATGCGCGGTCACTCTGCCATCTGGTGGTTATGC +
Preference number: 2 (lower is better)
Translates to: PPRPALRLLFRTVLF*EAGMRGHSAIWWLC
Trigger: GCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACACGATAGGTCTCCTATaGCATCAGGGGACCCAAAGA +
Preference number: 2 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNTIGLL*HQGTQR
Trigger: TCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGT...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGCTTGGGGGAAGCAGATaGTGGGAGGGTGGATTCTCC +
Preference number: 2 (lower is better)
Translates to: VTGSIGILQRDGCNATAVLGGSR*WEGGFS
Trigger: GGAGAATCCACCCTCCCATCATCTGCTTCCCCCAAG...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAATCTTTCCATTCCAGCTaGGACATACTGCCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PRISEDFHFLVGASLPHQSFHSS*DILPQA
Trigger: AGCCTGGGGCAGTATGTCTCAGCTGGAATGGAAAGA...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CCAGCTGAGACATACTGCCCCAGGCTGCTGGAACCCTTATCTAACAGGAAACCACAGATGATGGGAGGGTaGATTCTCCCCCAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: PAETYCPRLLEPLSNRKPQMMGG*ILPQSS
Trigger: AGAGCTTTGGGGGAGAATCCACCCTCCCATCATCTG...TGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CTCCTGACTTCAAGTGATCCACCCGCCTCGGTCTTCCAAACTGTTGGGATTACAACATTCTGTCACCTGTaGGAGGCCTTGGGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LLTSSDPPASVFQTVGITTFCHL*EALGEA
Trigger: TGCTTCCCCCAAGGCCTCCCACAGGTGACAGAATGT...TGTAATCCCAACAGTTTGGAAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGAGCCTCCCGAGTAGCTaGGACTACATGCCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLSLPSS*DYMPRR
Trigger: TCTCCTGGGCATGTAGTCCCAGCTACTCGGGAGGCT...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGTACTTCCACACGCTGTaGCCCTCCTGTCTGCAACAC +
Preference number: 2 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARYFHTL*PSCLQH
Trigger: GTGTTGCAGACAGGAGGGCCACAGCGTGTGGAAGTA...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 90 bp GCAGGTATGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATaGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGATCCAGTAAG +
Preference number: 2 (lower is better)
Translates to: AGMRGHSAIWWLCLE*HLPQLQEKNQRSSK
Trigger: CTTACTGGATCTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGACTCCTGACTTCAAGTaGTCCACCCGCCTCGGTCTT +
Preference number: 2 (lower is better)
Translates to: VTGSIGILQRDGCNATAVTPDFK*STRLGL
Trigger: AAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAGT...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGGGGAGGGAAGCTGGATaGTATACTACGGGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARGREAG*YTTGKG
Trigger: ACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCC...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGGAAGGGGAGGGAAGCTaGATGGTATACTACGGGGAA +
Preference number: 2 (lower is better)
Translates to: DDCEVIYEKSCTAEPQAREGEGS*MVYYGE
Trigger: TTCCCCGTAGTATACCATCCAGCTTCCCTCCCCTTC...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 90 bp TTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAAGAGCAGGTGTaGGGACTGGATGACTGTGAAGTTATCTACGAGAAGTCATGCACT +
Preference number: 2 (lower is better)
Translates to: LRADTSPVPTRQEQV*GLDDCEVIYEKSCT
Trigger: AGTGCATGACTTCTCGTAGATAACTTCACAGTCATCCAGTCCCAACACCTGCTCTTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATGCCATGTCAAGGTTCTaGGTCGAACTGGAGGTAACG +
Preference number: 2 (lower is better)
Translates to: ILGPSPELIFRPPTPASHAMSRF*VELEVT
Trigger: CGTTACCTCCAGTTCGACTCAGAACCTTGACATGGC...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAATGTATCTTTCTTGGCTaGCCTGGGCACTCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQCIFLG*PGHSLV
Trigger: AACCAAAGAGTGCCCAGGTCAGCCAAGAAAGATACA...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR GCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGACATACTGCCCCAGGCTaGTGGAACCCTTATCTAACA +
Preference number: 2 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGHTAPG*WNPYLT
Trigger: TGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATG...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR GCA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGGGTTATGCTTGGAATTaGACCTGCCCCAACTTCAGG +
Preference number: 2 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARGYAWN*TCPNFR
Trigger: CCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACC...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGACTGCCCCAGGCTGCTaGAACCCTTATCTAACAGGA +
Preference number: 2 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLTAPGC*NPYLTG
Trigger: TCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGT...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGAGGTGTAGTAAGGGGGTaGGAGAAGGACAAATGCATG +
Preference number: 2 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGGVVRG*EKDKCM
Trigger: CATGCATTTGTCCTTCTCCCACCCCCTTACTACACC...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGATCTGGTGGTTATGCTTaGAATTGCACCTGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGSGGYA*NCTCPN
Trigger: GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGA...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 90 bp TGGAGGAAGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTaGGGAATGGTTTGGAGATTTAGCAGACAGCACTCGATCAATGAG +
Preference number: 2 (lower is better)
Translates to: WRKGREAGWYTTGKG*GMVWRFSRQHSINE
Trigger: CTCATTGATCGAGTGCTGTCTGCTAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCTTCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGGCCAATGGCACCTTCTaGGCCAAGCTATGCATGAAA +
Preference number: 2 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLANGTF*AKLCMK
Trigger: TTTCATGCATAGCTTGGCTCAGAAGGTGCCATTGGC...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGTCTTGGTCCATCCCCTaGACTAATCTTCAGACCTCC +
Preference number: 2 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPESWSIP*TNLQTS
Trigger: GGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGA...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR GCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCTCCCATGTGCCTGTCTaGCAATGGCACCTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAISHVPV*QWHLLS
Trigger: GCTCAGAAGGTGCCATTGGCAGACAGGCACATGGGA...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR GCA 90 bp CTCCTGACTTCAAGTGATCCACCCGCCTCGGTCTTCCAAACTGTTGGGATTACAGCTTGGAATTGCACCTaGCCCAACTTCAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: LLTSSDPPASVFQTVGITAWNCT*PNFRRK
Trigger: TTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGC...TGTAATCCCAACAGTTTGGAAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAAGCATTGCAGAAACGCTaGGCTGAAAGTTCCACTATT +
Preference number: 2 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQALQKR*AESSTI
Trigger: AATAGTGGAACTTTCAGCCCAGCGTTTCTGCAATGC...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 90 bp AAGAACAAAGAAGAGCATCAGGGGTCCCAGAGTGGCATTGTCAGCTaGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: KNKEEHQGSQSGIVS*QSDISFPVPDYAVE
Trigger: TTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTGACAATGCCACTCTGGGACCCCTGATGCTCTTCTTTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGGAAAATCTGCCAAACTaGCAGCTAGGGGTGAAGAGA +
Preference number: 2 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLENLPN*QLGVKR
Trigger: TCTCTTCACCCCTAGCTGTCAGTTTGGCAGATTTTC...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGTCGATTGAAGACTGCTaGTTGGGAGCCAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: HRARLCGCFSELFYSWKQSIEDC*LGAKTD
Trigger: ATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGA...CTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp CTCCTGACTTCAAGTGATCCACCCGCCTCGGTCTTCCAAACTGTTGGGATTACACTGTGTAACTCCCACTaGAGTCCCATGAGATTATGT +
Preference number: 2 (lower is better)
Translates to: LLTSSDPPASVFQTVGITLCNSH*SPMRLC
Trigger: ACATAATCTCATGGGACTTCAGTGGGAGTTACACAG...TGTAATCCCAACAGTTTGGAAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAAGCAGAAACGCTGGGCTaGAAGTTCCACTATTTAAAA +
Preference number: 2 (lower is better)
Translates to: PRISEDFHFLVGASLPHQAETLG*KFHYLK
Trigger: TTTTAAATAGTGGAACTTTCAGCCCAGCGTTTCTGC...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCCTGAAGTTCCATCTCTaGCTCCCAGTTGGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAILKFHL*LPVGSL
Trigger: GAGAGACCCAACTGGGAGCCAGAGATGGAACTTCAG...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGGTTATGTGGGGGTGTTaGTTGTACAATACTCTAGGG +
Preference number: 2 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARVMWGC*LYNTLG
Trigger: CCCTAGAGTATTGTACAACCAACACCCCCACATAAC...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 90 bp TGTTCAAAACTCACCATTTATTGGTTTGGGTCTAAGTACCCAACATaGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAAGAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: CSKLTIYWFGSKYPT*RADTSPVPTRQEQV
Trigger: CACCTGCTCTTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCCAAACCAATAAATGGTGAGTTTTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp CTCCTGACTTCAAGTGATCCACCCGCCTCGGTCTTCCAAACTGTTGGGATTACAGAATTATTGATCGATTaGAGACTGCTGATTGGGAGC +
Preference number: 2 (lower is better)
Translates to: LLTSSDPPASVFQTVGITELLID*RLLIGS
Trigger: GCTCCCAATCAGCAGTCTTCAATCGATCAATAATTC...TGTAATCCCAACAGTTTGGAAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR GCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCAGTAGCTGGGACTACATaGCCAGGAGAGATGGGGTTT +
Preference number: 2 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAVAGTT*PGEMGF
Trigger: AAACCCCATCTCTCCTGGGCATGTAGTCCCAGCTAC...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAAATTATGTATCTTTCTTaGCTGACCTGGGCACTCTTT +
Preference number: 2 (lower is better)
Translates to: PRISEDFHFLVGASLPHQIMYLS*LTWALF
Trigger: AAAGAGTGCCCAGGTCAGCCAAGAAAGATACATAAT...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGCCCACTGAAGTCCCATaGGATTATGTATCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: VTGSIGILQRDGCNATAVPTEVP*DYVSFL
Trigger: CAAGAAAGATACATAATCTCATGGGACTTCAGTGGG...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGAAGTTCAGTGAGTACTTaGCTGAGAACATCTAAAGAG +
Preference number: 2 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGSSVST*LRTSKE
Trigger: CTCTTTAGATGTTCTCAGTCAAGTACTCACTGAACT...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CTCCTGACTTCAAGTGATCCACCCGCCTCGGTCTTCCAAACTGTTGGGATTACACTCTTTGGTTTGTCATaGCTAAACTTGCTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: LLTSSDPPASVFQTVGITLFGLS*LNLLSA
Trigger: TGCTGAAAGCAAGTTTAGCCATGACAAACCAAAGAG...TGTAATCCCAACAGTTTGGAAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAATTGAAGACTGCTGATTaGGAGCCAAAACAGATGTGT +
Preference number: 2 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKLKTAD*EPKQMC
Trigger: ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAA...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 90 bp CTGATTGGGAGCCAAAACAGATGTGTCCCTGGTAAAAACAGTGACTaGAGGTTCCATCTCACATTCTTTCCATTCCAGCTGAGACATACT +
Preference number: 2 (lower is better)
Translates to: LIGSQNRCVPGKNSD*RFHLTFFPFQLRHT
Trigger: AGTATGTCTCAGCTGGAATGGAAAGAATGTGAGATGGAACCTCAAGTCACTGTTTTTACCAGGGACACATCTGTTTTGGCTCCCAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCTCCCAGACTATGCTGTaGAAAAGACCATTTCTAGCA +
Preference number: 2 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAISQTML*KRPFLA
Trigger: TGCTAGAAATGGTCTTTTCCACAGCATAGTCTGGGA...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACAATCACGCGCCAACATaGCTGAGTCCCACTTCTTTA +
Preference number: 2 (lower is better)
Translates to: RFSRQHSINEFSEYLTENNHAPT*LSPTSL
Trigger: TAAAGAAGTGGGACTCAGCCATGTTGGCGCGTGATT...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCAGAACTGTTTTATTCTTaGAAGCAGGTATGCGCGGTC +
Preference number: 2 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAELFYS*KQVCAV
Trigger: GACCGCGCATACCTGCTTCCAAGAATAAAACAGTTC...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTCACCTCCTTCTGTTATaGCCATGTCAAGGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLHLLLL*PCQGSE
Trigger: CTCAGAACCTTGACATGGCCATAACAGAAGGAGGTG...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCACTTCTTTAAAGCTCTaGGGGAAATTCTTGGTCCAT +
Preference number: 2 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAITSLKL*GKFLVH
Trigger: ATGGACCAAGAATTTCCCCCAGAGCTTTAAAGAAGT...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR TCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCAGTAAAAACAGTGACTTaGGGTTCCATCTCACATTCT +
Preference number: 2 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAVKTVT*GSISHS
Trigger: AGAATGTGAGATGGAACCTCAAGTCACTGTTTTTAC...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR GCA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTGCCCGGCTTTGCGGTTaGTTTTCAGAACTGTTTTAT +
Preference number: 2 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLARLCG*FSELFY
Trigger: ATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGC...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCAGATCCAGTAAGTTCTTaGAATAAAGTACACTCAGCT +
Preference number: 2 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSADPVSS*NKVHSA
Trigger: AGCTGAGTGTACTTTATTCCAAGAACTTACTGGATC...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR GCA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTACTAACAGTTTTCTGTaGTGTAATGTCAATCACGCG +
Preference number: 2 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCTNSFL*CNVNHA
Trigger: CGCGTGATTGACATTACAGCACAGAAAACTGTTAGT...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp GTGGCCCTCCTGTCTGCAACACCTGCTCTGGGTTGTTaGGGAAGAGGGGACAAAGTTATGTGGGGGTGTTGG +
Preference number: 3 (lower is better)
Translates to: VALLSATPALGC*GRGDKVMWGCW
Trigger: CCAACACCCCCACATAACTTTGTCCCCTCTTCCCCAACAACCCAGAGCAGGTGTTGCAGACAGGAGGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 72 bp ACTTCCACACGCTGTGGCCCTCCTGTCTGCAACACCTaGTCTGGGTTGTTGGGGAAGAGGGGACAAAGTTAT +
Preference number: 3 (lower is better)
Translates to: TSTRCGPPVCNT*SGLLGKRGQSY
Trigger: ATAACTTTGTCCCCTCTTCCCCAACAACCCAGAGCAGGTGTTGCAGACAGGAGGGCCACAGCGTGTGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CAA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGCCACCGCGCCCGGCTTaGCGGTTGCTTTTCAGAACT +
Preference number: 3 (lower is better)
Translates to: VTGSIGILQRDGCNATAVPPRPA*RLLFRT
Trigger: AGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTGG...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp TTGGAAGCAGGTATGCGCGGTCACTCTGCCATCTGGTaGTTATGCTTGGAATTGCACCTGCCCCAACTTCAG +
Preference number: 3 (lower is better)
Translates to: LEAGMRGHSAIW*LCLELHLPQLQ
Trigger: CTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 72 bp GTCGAACTGGAGGTAACGAGGGAAAATCTGCCAAACTaGCAGCTAGGGGTGAAGAGATGGAAGGGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: VELEVTRENLPN*QLGVKRWKGRQ
Trigger: CTGCCTTCCCTTCCATCTCTTCACCCCTAGCTGTCAGTTTGGCAGATTTTCCCTCGTTACCTCCAGTTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CAA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGGGTCCCAGAGTGGCATaGTCAGCTTGCAGTCAGACA +
Preference number: 3 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEGPRVA*SACSQT
Trigger: TGTCTGACTGCAAGCTGACAATGCCACTCTGGGACC...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CAA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGATCTGGTGGTTATGCTaGGAATTGCACCTGCCCCAA +
Preference number: 3 (lower is better)
Translates to: HRARLCGCFSELFYSWKQIWWLC*ELHLPQ
Trigger: TTGGGGCAGGTGCAATTCCAAGCATAACCACCAGAT...CTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 72 bp GAGGCACCTCCTTCTGTTATGGCCATGTCAAGGTTCTaGGTCGAACTGGAGGTAACGAGGGAAAATCTGCCA +
Preference number: 3 (lower is better)
Translates to: EAPPSVMAMSRF*VELEVTRENLP
Trigger: TGGCAGATTTTCCCTCGTTACCTCCAGTTCGACTCAGAACCTTGACATGGCCATAACAGAAGGAGGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CAA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAAGATTATGTATCTTTCTaGGCTGACCTGGGCACTCTT +
Preference number: 3 (lower is better)
Translates to: PRISEDFHFLVGASLPHQDYVSF*ADLGTL
Trigger: AAGAGTGCCCAGGTCAGCCAAGAAAGATACATAATC...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 72 bp TGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTaGCATCTGGTGGTTATGCTTGGAATTGCACCTGCC +
Preference number: 3 (lower is better)
Translates to: CFILGSRYARSL*HLVVMLGIAPA
Trigger: GGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp CCCAAAGAACAAAGAAGAGCATCAGGGGTCCCAGAGTaGCATTGTCAGCTTGCAGTCAGACATCTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: PKEQRRASGVPE*HCQLAVRHLFS
Trigger: GGAAAAGAGATGTCTGACTGCAAGCTGACAATGCCACTCTGGGACCCCTGATGCTCTTCTTTGTTCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp GGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTaGGAATGGTTTGGAGATTTAGCAGACAGCACTCGA +
Preference number: 3 (lower is better)
Translates to: GGKLDGILRGKV*EWFGDLADSTR
Trigger: TCGAGTGCTGTCTGCTAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 72 bp TCACCATTTATTGGTTTGGGTCTAAGTACCCAACATTaGGGGCTGACACTTCGCCTGTTCCTACCAGGCAAG +
Preference number: 3 (lower is better)
Translates to: SPFIGLGLSTQH*GLTLRLFLPGK
Trigger: CTTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCCAAACCAATAAATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 72 bp TTCTTTCCATTCCAGCTGAGACATACTGCCCCAGGCTaGTGGAACCCTTATCTAACAGGAAACCAGTCACTA +
Preference number: 3 (lower is better)
Translates to: FFPFQLRHTAPG*WNPYLTGNQSL
Trigger: TAGTGACTGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGGAATGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 72 bp TATGTGGGGGTGTTGGTTGTACAATACTCTAGGGTGTaGCGAGAATTTCTGAGGACTTCCACTTCTTGGTGG +
Preference number: 3 (lower is better)
Translates to: YVGVLVVQYSRV*REFLRTSTSWW
Trigger: CCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGGCACACCCTAGAGTATTGTACAACCAACACCCCCACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CAA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGAGAATTATTGATCGATaGAAGACTGCTGATTGGGAG +
Preference number: 3 (lower is better)
Translates to: HRARLCGCFSELFYSWKQRIIDR*KTADWE
Trigger: CTCCCAATCAGCAGTCTTCAATCGATCAATAATTCT...CTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 72 bp TGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATaGGCGGTCACTCTGCCATCTGGTGGTTATGCTTGG +
Preference number: 3 (lower is better)
Translates to: CFSELFYSWKQV*AVTLPSGGYAW
Trigger: CCAAGCATAACCACCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp GAAAGAATGGCAAGTTCCAAGACGATAGGTCTCCTATaGCATCAGGGGACCCAAAGAACAAAGAAGAGCATC +
Preference number: 3 (lower is better)
Translates to: ERMASSKTIGLL*HQGTQRTKKSI
Trigger: GATGCTCTTCTTTGTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 72 bp CTTCAACATTCCTGTGTAACTCCCACTGAAGTCCCATaGGATTATGTATCTTTCTTGGCTGACCTGGGCACT +
Preference number: 3 (lower is better)
Translates to: LQHSCVTPTEVP*DYVSFLADLGT
Trigger: AGTGCCCAGGTCAGCCAAGAAAGATACATAATCTCATGGGACTTCAGTGGGAGTTACACAGGAATGTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 72 bp TGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTaGAGAAACGCTGGGCTGAAAGTTCCACTATTTAAA +
Preference number: 3 (lower is better)
Translates to: CLELPSIHFTLH*RNAGLKVPLFK
Trigger: TTTAAATAGTGGAACTTTCAGCCCAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp GGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTaGAGATTTAGCAGACAGCACTCGATCAATGAGTTC +
Preference number: 3 (lower is better)
Translates to: GWYTTGKGLGMV*RFSRQHSINEF
Trigger: GAACTCATTGATCGAGTGCTGTCTGCTAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp AAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATaGTTTGGAGATTTAGCAGACAGCACTCGATCAATG +
Preference number: 3 (lower is better)
Translates to: KLDGILRGKVWE*FGDLADSTRSM
Trigger: CATTGATCGAGTGCTGTCTGCTAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CAA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAATTGTCATGGCTAAACTaGCTTTCAGCACTTACAGTT +
Preference number: 3 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKLSWLN*LSALTV
Trigger: AACTGTAAGTGCTGAAAGCAAGTTTAGCCATGACAA...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CAA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATGGGCACTCTTTGGTTaGTCATGGCTAAACTTGCTT +
Preference number: 3 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAWALFG*SWLNLL
Trigger: AAGCAAGTTTAGCCATGACAAACCAAAGAGTGCCCA...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp AGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTaGAAAAGACCATTTCTAGCATGTTCTATCAGAGGC +
Preference number: 3 (lower is better)
Translates to: SQTSLFQSQTML*KRPFLACSIRG
Trigger: GCCTCTGATAGAACATGCTAGAAATGGTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp CTTTCTTGGCTGACCTGGGCACTCTTTGGTTTGTCATaGCTAAACTTGCTTTCAGCACTTACAGTTTTTCCA +
Preference number: 3 (lower is better)
Translates to: LSWLTWALFGLS*LNLLSALTVFP
Trigger: TGGAAAAACTGTAAGTGCTGAAAGCAAGTTTAGCCATGACAAACCAAAGAGTGCCCAGGTCAGCCAAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR TCA 72 bp TGTTCCTTCTCTTCCAGAGCAGAATTATTGATCGATTaGAGACTGCTGATTGGGAGCCAAAACAGATGTGTC +
Preference number: 3 (lower is better)
Translates to: CSFSSRAELLID*RLLIGSQNRCV
Trigger: GACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCTCTGGAAGAGAAGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR GCA 72 bp TTATCTAACAGGAAACCAGTCACTAACAGTTTTCTGTaGTGTAATGTCAATCACGCGCCAACATGGCTGAGT +
Preference number: 3 (lower is better)
Translates to: LSNRKPVTNSFL*CNVNHAPTWLS
Trigger: ACTCAGCCATGTTGGCGCGTGATTGACATTACAGCACAGAAAACTGTTAGTGACTGGTTTCCTGTTAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp GATTATGTATCTTTCTTGGCTGACCTGGGCACTCTTTaGTTTGTCATGGCTAAACTTGCTTTCAGCACTTAC +
Preference number: 3 (lower is better)
Translates to: DYVSFLADLGTL*FVMAKLAFSTY
Trigger: GTAAGTGCTGAAAGCAAGTTTAGCCATGACAAACCAAAGAGTGCCCAGGTCAGCCAAGAAAGATACATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CCA 72 bp AAGTCCCATGAGATTATGTATCTTTCTTGGCTGACCTaGGCACTCTTTGGTTTGTCATGGCTAAACTTGCTT +
Preference number: 3 (lower is better)
Translates to: KSHEIMYLSWLT*ALFGLSWLNLL
Trigger: AAGCAAGTTTAGCCATGACAAACCAAAGAGTGCCCAGGTCAGCCAAGAAAGATACATAATCTCATGGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR-3UTR CAA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTAGTGGCATTGTCAGCTaGCAGTCAGACATCTCTTTT +
Preference number: 3 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLSGIVS*QSDISF
Trigger: AAAAGAGATGTCTGACTGCAAGCTGACAATGCCACT...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACGCTTCTCAGCCCGTCTaGGCGGCTGCACGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNASQPV*AAARQA
Trigger: AGCCTGCCGTGCAGCCGCTCAGACGGGCTGAGAAGC...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GCAGATGATGGGAGGGTGGATTCTCCCCCAAAGCTCTGGAATTTCACACACCCAGACCAGGGCCGAGCCTaGCACGCCCCCGGGACGCAA +
Preference number: 4 (lower is better)
Translates to: ADDGRVDSPPKLWNFTHPDQGRA*HAPGTQ
Trigger: TTGCGTCCCGGGGGCGTGGCAGGCTCGGCCCTGGTC...TGGGTGTGTGAAATTCCAGAGCTTTGGGGGAGAATCCACCCTCCCATCATCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACGCACCCCGGGGCCAGTaGTCAGCTGGGCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNAPRGQ*SAGQEA
Trigger: GGCTTCTTGCCCAGCTGACCACTGGCCCCGGGGTGC...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGACAGCAGGTCCCCGCCTaGGCCGTACAACCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGQQVPA*AVQPRA
Trigger: CGCCCGCGGTTGTACGGCCCAGGCGGGGACCTGCTG...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGAGCAGGAGGAAGCTGGTaGCTTCGGCGGCGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGAGGSW*LRRRAG
Trigger: CCCTGCGCGCCGCCGAAGGCACCAGCTTCCTCCTGC...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGAAGTCGCTCTGCTCCCTaGAGCGCTGCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGSRSAP*SAAVPG
Trigger: CCCCGGGACCGCAGCGCTGCAGGGAGCAGAGCGACT...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACGTCACTGTAGGGGTCTaGGGCCCGCAACGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNVTVGV*GPQRLQ
Trigger: CTGGAGACGTTGCGGGCCGCAGACCCCTACAGTGAC...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGCGAGTTGAGGGTCGGTaGGGGCACCGGTGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: VTGSIGILQRDGCNATAVRVEGR*GHRCGG
Trigger: ACCGCCGCACCGGTGCCCTCACCGACCCTCAACTCG...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAACATTCTCCCCCGAGTTaGGGGTCGGTGAGGGCACCG +
Preference number: 4 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQHSPPS*GSVRAP
Trigger: CGGTGCCCTCACCGACCCTCAACTCGGGGGAGAATG...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GCAGATGATGGGAGGGTGGATTCTCCCCCAAAGCTCTGGAATTTCACACACCCATCAGGCGCAGGCCGCTaGACAGGGCCGACAAGGCTA +
Preference number: 4 (lower is better)
Translates to: ADDGRVDSPPKLWNFTHPSGAGR*TGPTRL
Trigger: TAGCCTTGTCGGCCCTGTTCAGCGGCCTGCGCCTGA...TGGGTGTGTGAAATTCCAGAGCTTTGGGGGAGAATCCACCCTCCCATCATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACGTGCCGCGAACACACTaGGTAGGGGCAGATTTCGGC +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNVPRTH*VGADFG
Trigger: GCCGAAATCTGCCCCTACTCAGTGTGTTCGCGGCAC...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGGCAGATGGGTCCCCCTaGCGCGAACGGCCTGCACGC +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEADGSP*RERPAR
Trigger: GCGTGCAGGCCGTTCGCGGCAGGGGGACCCATCTGC...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACGGAATACCGCGCCGGTaGACACGAGCGCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNGIPRR*TRAPAA
Trigger: GGCTGCCGGCGCTCGTGTGCACCGGCGCGGTATTCC...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGTCCCGCACTCGCACCTaGACCAGGGCCGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLSRTRT*TRAEPA
Trigger: GGCAGGCTCGGCCCTGGTCCAGGTGCGAGTGCGGGA...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAAGCGTTGGCTCCGGCTTaGCCCAGGAGTAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PRISEDFHFLVGASLPHQALAPA*PRSRVQ
Trigger: CTGCACCCTACTCCTGGGCCAAGCCGGAGCCAACGC...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATCAGCCAGGGCCGCGTTaGCTCCGGCTTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHQPGPR*LRLGPG
Trigger: TCCTGGGCCAAGCCGGAGCCAACGCGGCCCTGGCTG...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CCAGCTGAGACATACTGCCCCAGGCTGCTGGAACCCTTATCTAACAGGAAACCAGTCGAGCACCGCGTCTaGGCGCAGCATGAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: PAETYCPRLLEPLSNRKPVEHRV*AQHEAV
Trigger: GACTGCTTCATGCTGCGCTCAGACGCGGTGCTCGAC...TGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACTGTAGTCTTCCCCGGTaGCCCCGAAGCCCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNCSLPR*PRSPAA
Trigger: TGCCGCCGGGCTTCGGGGGCACCGGGGAAGACTACA...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACGTCAGGCACACGCTGTaGGAGGCGATGGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNVRHTL*EAMASP
Trigger: CGGGCTGGCCATCGCCTCGCACAGCGTGTGCCTGAC...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CTCCTGACTTCAAGTGATCCACCCGCCTCGGTCTTCCAAACTGTTGGGATTACATGGAGTCCCCGTCTGTaGAGGCCTCCATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLTSSDPPASVFQTVGITWSPRL*RPPCQG
Trigger: CCCCTGACATGGAGGCCTTCACAGACGGGGACTCCA...TGTAATCCCAACAGTTTGGAAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGCACGGGGAAGGCGGCTaGCATCAGAAGCCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEHGEGG*HQKPGQ
Trigger: CTGACCCGGCTTCTGATGGCAGCCGCCTTCCCCGTG...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAACCCGCGTGTAGAAGGTaGTTATCTCCTGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQPACRR*LSPGAA
Trigger: CGCTGCGCCAGGAGATAAGCACCTTCTACACGCGGG...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CCAGCTGAGACATACTGCCCCAGGCTGCTGGAACCCTTATCTAACAGGAAACCACCTCGTACACTGGGATaGGAGTGTAGCCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PAETYCPRLLEPLSNRKPPRTLG*ECSRCA
Trigger: TGCGCAGCGGCTACACTCGCATCCCAGTGTACGAGG...TGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACACGCAGGAGGAAGCTaGTGCCTTCGGCGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKHAGGS*CLRRRA
Trigger: TGCGCGCCGCCGAAGGCACCAGCTTCCTCCTGCGTG...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGAGGTGGCCGGCGGTCCTaGCTGGAAATAGACACGCAG +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGGGRRS*LEIDTQ
Trigger: CTGCGTGTCTATTTCCAGCCAGGACCGCCGGCCACC...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAAGGATCTCGGAGACAGTaGCGAAGTCGAGCACCGCGT +
Preference number: 4 (lower is better)
Translates to: PRISEDFHFLVGASLPHQGSRRQ*RSRAPR
Trigger: ACGCGGTGCTCGACTTCGCCACTGTCTCCGAGATCC...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CTCCTGACTTCAAGTGATCCACCCGCCTCGGTCTTCCAAACTGTTGGGATTACAATCCCAGGCGCAGAGTaGAAAGAGCTTCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: LLTSSDPPASVFQTVGITIPGAE*KELPAT
Trigger: GGTGGCGGGAAGCTCTTTTCACTCTGCGCCTGGGAT...TGTAATCCCAACAGTTTGGAAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CAGCTTGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAAAAGACGATGCCCAGTCGCTCTaGTCCCTGCAGCGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: QLAVRHLFSSPRLCCGKDDAQSL*SLQRCG
Trigger: ACCGCAGCGCTGCAGGGAGCAGAGCGACTGGGCATC...GTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACGCATGTAGAGGTTGTTaGTGCTGCTGTACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNACRGC*CCCTAG
Trigger: CCCAGCTGTACAGCAGCAGCAACAACCTCTACATGC...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACCACACACCCAGTGAATaGTGGCTTTGCCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNHTPSE*WLCPVM
Trigger: CATGACAGGGCAAAGCCAGCATTCACTGGGTGTGTG...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGACTCCAGCCTCCCATGTaGCTGTCTGCCAATGGCACC +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGLQPPM*LSANGT
Trigger: GGTGCCATTGGCAGACAGGCACATGGGAGGCTGGAG...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCACGCTGTGCGAGGCGATaGCCAGCCCGTGCCGCGAAC +
Preference number: 4 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSARCARR*PARAAN
Trigger: GTTCGCGGCACGGGCTGGCCATCGCCTCGCACAGCG...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGCCTCCTCCACAACTTTaGTGCGCAGCTCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARPPPQL*CAAPGH
Trigger: GTGCCCTGGAGCTGCGCACCAAAGTTGTGGAGGAGG...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGATCATCCTTAGGGGTCTaGGGTGTGCCCCGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGSSLGV*GVPRVV
Trigger: CACAACCCGGGGCACACCCCAGACCCCTAAGGATGA...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACGGGAGGGAAGCTGGATaGTATACTACGGGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNGREAG*YTTGKG
Trigger: ACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCC...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACATTTCACACACCCAGTaGATGCTGGCTTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNISHTQ*MLALPC
Trigger: ACAGGGCAAAGCCAGCATTCACTGGGTGTGTGAAAT...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGCGCTTCCGCTCCCGTTaGGGGACCCTCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPERFRSR*GTLCFF
Trigger: GAAAAAGCAGAGGGTCCCGCAACGGGAGCGGAAGCG...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAATGCCCCCAAAGTCACTaGGCTCTCGGTTTGGAGACT +
Preference number: 4 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQCPQSH*ALGLET
Trigger: AGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCA...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CCAGCTGAGACATACTGCCCCAGGCTGCTGGAACCCTTATCTAACAGGAAACCATGTACAGCTGGGTGTTaGTGCCCCCAAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: PAETYCPRLLEPLSNRKPCTAGC*CPQSHC
Trigger: GCAGTGACTTTGGGGGCAGCAACACCCAGCTGTACA...TGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GCAGATGATGGGAGGGTGGATTCTCCCCCAAAGCTCTGGAATTTCACACACCCACCTGTCTGCAACACCTaGTCTGGGTTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ADDGRVDSPPKLWNFTHPPVCNT*SGLLGK
Trigger: CTTCCCCAACAACCCAGAGCAGGTGTTGCAGACAGG...TGGGTGTGTGAAATTCCAGAGCTTTGGGGGAGAATCCACCCTCCCATCATCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAAGCTCCTGGATCACGTTaGGATGTTTCAGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PRISEDFHFLVGASLPHQAPGSR*DVSGAG
Trigger: TCCGGCTCCTGAAACATCCCAACGTGATCCAGGAGC...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGCTGCTGCTGTACAGCTaGGTGTTGCTGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: HRARLCGCFSELFYSWKQLLLYS*VLLPPK
Trigger: CTTTGGGGGCAGCAACACCCAGCTGTACAGCAGCAG...CTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CCAGCTGAGACATACTGCCCCAGGCTGCTGGAACCCTTATCTAACAGGAAACCATCTCTGGCTCCCAGTTaGGTCTCTCTGCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PAETYCPRLLEPLSNRKPSLAPS*VSLLPV
Trigger: AACAGGGAGCAGAGAGACCCAACTGGGAGCCAGAGA...TGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp ACCTCCTTCTGTTATGGCCATGTCAAGGTTCTGAGTCGAACTGGAGGTAACGAGCCACTTCTGTGGCCATaGAGCGGTGTGTGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: TSFCYGHVKVLSRTGGNEPLLWP*SGVWLA
Trigger: TGCTAGCCACACACCGCTTCATGGCCACAGAAGTGG...CTCGTTACCTCCAGTTCGACTCAGAACCTTGACATGGCCATAACAGAAGGAGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACACAACATTCACTATCTaGTGCTGCTCTCGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNTTFTI*CCSRGN
Trigger: GTTCCCACGAGAGCAGCATCAGATAGTGAATGTTGT...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGAACTCCTGACTTCAAGTaGTCCACCCGCCTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGTPDFK*STRLGL
Trigger: AAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAGT...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGCCCAACATTGAGGGCTaGCACTTCGCCTGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARPNIEG*HFACSY
Trigger: GTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGG...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAAGACTTCCACGTCCGATaGCCAGTCGCTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKDFHVR*PVALLP
Trigger: AGGGAGCAGAGCGACTGGGCATCGGACGTGGAAGTC...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCTCCACAACTTTGGTaGGCAGCTCCAGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKPPQLW*AAPGHP
Trigger: AGGGTGCCCTGGAGCTGCGCACCAAAGTTGTGGAGG...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACACAGCTGGGTGTTGCTaGCCCCAAAGTCACTGCGCT +
Preference number: 4 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNTAGCC*PQSHCA
Trigger: AGCGCAGTGACTTTGGGGGCAGCAACACCCAGCTGT...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGTGTGGCCCTCCTGTCTaGAACACCTGCTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPECGPPV*NTCSGL
Trigger: CAACCCAGAGCAGGTGTTGCAGACAGGAGGGCCACA...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAAAGGGTGCAGAGCAGATaGGTCCCCCTGCCGCGAACG +
Preference number: 4 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQRVQSR*VPLPRT
Trigger: CGTTCGCGGCAGGGGGACCCATCTGCTCTGCACCCT...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATGTCACCCTCGTACACTaGGATGCGAGTGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHVTLVH*DASVAA
Trigger: AGCGGCTACACTCGCATCCCAGTGTACGAGGGTGAC...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGCATGCCCAGGAGAGATaGGGTTTCACCATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HRARLCGCFSELFYSWKQHAQER*GFTMLA
Trigger: GGCCAACATGGTGAAACCCCATCTCTCCTGGGCATG...CTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGAACTTCCACTTCTTGGTaGGTGCCAGCCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGTSTSW*VPAFPI
Trigger: GATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGT...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 72 bp CGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATaGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: RGHSAIWWLCLE*HLPQLQEKNQR
Trigger: TCTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGCCAGTCGGGTGTCATTaGAAACACAATGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEPVGCH*KHNAGA
Trigger: GGCCCCTGCATTGTGTTTTCAATGACACCCGACTGG...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGAGCAAGCAGTGGTCATaGTGGCTGGGACGCCATAGT +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPESKQWS*WLGRHS
Trigger: ACTATGGCGTCCCAGCCATCATGACCACTGCTTGCT...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCTGCAGGAGACAGCGTaGGCTGCTGTGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: AFQNCFILGSRYARSLCHLQETA*AAVCCA
Trigger: AGCACAGCACACAGCAGCTCACGCTGTCTCCTGCAG...ATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATTGCGAGTGTAGCCGCTaGGCAGGATCTCGGAGACAG +
Preference number: 4 (lower is better)
Translates to: AFQNCFILGSRYARSLCHCECSR*AGSRRQ
Trigger: CTGTCTCCGAGATCCTGCGCAGCGGCTACACTCGCA...ATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp ACCTCCTTCTGTTATGGCCATGTCAAGGTTCTGAGTCGAACTGGAGGTAACGAGAGTCCACAGGGCGGTTaGGCTGGTAGAGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: TSFCYGHVKVLSRTGGNESPQGG*AGRGSV
Trigger: AACACTACCTCTACCAGCGCAACCGCCCTGTGGACT...CTCGTTACCTCCAGTTCGACTCAGAACCTTGACATGGCCATAACAGAAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAACATACTGCCCCAGGCTaGTGGAACCCTTATCTAACA +
Preference number: 4 (lower is better)
Translates to: PRISEDFHFLVGASLPHQHTAPG*WNPYLT
Trigger: TGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATG...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGTCTTGGAAGCAGGTATaGGCGGTCACTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: HRARLCGCFSELFYSWKQSWKQV*AVTLPS
Trigger: AGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGA...CTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGTCAGGGGTCCCAGAGTaGCATTGTCAGCTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VTGSIGILQRDGCNATAVSGVPE*HCQLAV
Trigger: GACTGCAAGCTGACAATGCCACTCTGGGACCCCTGA...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CAGCTTGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAAAAGACAGCCTCCCGAGTAGCTaGGACTACATGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QLAVRHLFSSPRLCCGKDSLPSS*DYMPRR
Trigger: TCTCCTGGGCATGTAGTCCCAGCTACTCGGGAGGCT...GTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACGCATTGCAGAAACGCTaGGCTGAAAGTTCCACTATT +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNALQKR*AESSTI
Trigger: AATAGTGGAACTTTCAGCCCAGCGTTTCTGCAATGC...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACCCATGTGGCAGGCAGTaGGTGCGTTCTGATATTGCT +
Preference number: 4 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNPCGRQ*VRSDIA
Trigger: AGCAATATCAGAACGCACTCACTGCCTGCCACATGG...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGGCCATGTCAAGGTTCTaGGTCGAACTGGAGGTAACG +
Preference number: 4 (lower is better)
Translates to: VTGSIGILQRDGCNATAVAMSRF*VELEVT
Trigger: CGTTACCTCCAGTTCGACTCAGAACCTTGACATGGC...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGTCTTTCCATTCCAGCTaGGACATACTGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPESFHSS*DILPQA
Trigger: AGCCTGGGGCAGTATGTCTCAGCTGGAATGGAAAGA...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATGATAACCCAGAGGAATaGTCAGTCTCCCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHDNPEE*SVSLLP
Trigger: AGGCAGGAGGGAGACTGATCATTCCTCTGGGTTATC...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATCTAAGTACCCAACATTaGGGGCTGACACTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHLSTQH*GLTLRL
Trigger: CAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAG...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGCGTTGCGGGACCCTCTaGTTTTTCCGATTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLRCGTL*FFRLSV
Trigger: CACTGACAATCGGAAAAAGCAGAGGGTCCCGCAACG...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGGGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTTGGGAATGGTTTGGATGTAGAGGTTGTTGCTaGTGCTGTACAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RGGKLDGILRGKVWEWFGCRGCC*CCTAGC
Trigger: ACACCCAGCTGTACAGCAGCAGCAACAACCTCTACA...TCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATGTAGCTGGGACTACATaGCCAGGAGAGATGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHVAGTT*PGEMGF
Trigger: AAACCCCATCTCTCCTGGGCATGTAGTCCCAGCTAC...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAAAAGGTGCTTATCTCCTaGCGCAGCGCCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQKVLIS*RSAQSS
Trigger: GCTGGACTGGGCGCTGCGCCAGGAGATAAGCACCTT...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGCAGATGATGGGAGGGTaGATTCTCCCCCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLQMMGG*ILPQSS
Trigger: AGAGCTTTGGGGGAGAATCCACCCTCCCATCATCTG...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAAGTGCCTGTCTGCCAATaGCACCTTCTGAGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKVPVCQ*HLLSQA
Trigger: AGCTTGGCTCAGAAGGTGCCATTGGCAGACAGGCAC...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp TGCGCGGTCACTCTGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACCTACGGGGAAAGGTTTaGGAATGGTTTGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: CAVTLPSGGYAWNCTCPNLRGKV*EWFGDL
Trigger: TAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAG...GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCAGAGTGACCGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGCCTGCTCTGGGTTGTTaGGGAAGAGGGGACAAAGTT +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEPALGC*GRGDKV
Trigger: AACTTTGTCCCCTCTTCCCCAACAACCCAGAGCAGG...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 72 bp GAAGAGCATCAGGGGTCCCAGAGTGGCATTGTCAGCTaGCAGTCAGACATCTCTTTTCCAGTCCCAGACTAT +
Preference number: 4 (lower is better)
Translates to: EEHQGSQSGIVS*QSDISFPVPDY
Trigger: ATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTGACAATGCCACTCTGGGACCCCTGATGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 72 bp CCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTaGGAAGCAGGTATGCGCGGTCACTCTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PALRLLFRTVLF*EAGMRGHSAIW
Trigger: CCAGATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 72 bp GGGAGGGAAGCTGGATGGTATACTACGGGGAAAGGTTaGGGAATGGTTTGGAGATTTAGCAGACAGCACTCG +
Preference number: 4 (lower is better)
Translates to: GREAGWYTTGKG*GMVWRFSRQHS
Trigger: CGAGTGCTGTCTGCTAAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGTATACCATCCAGCTTCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAATGGACAATGGCCAGGTaGGATTTTCCCTTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQWTMAR*DFPFLN
Trigger: GTTTAAGAAGGGAAAATCTCACCTGGCCATTGTCCA...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAAGCAGTGAGTGCGTTCTaGTATTGCTGCCGTGTGATC +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKAVSAF*YCCRVI
Trigger: GATCACACGGCAGCAATATCAGAACGCACTCACTGC...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATGCCAATGGCACCTTCTaGGCCAAGCTATGCATGAAA +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHANGTF*AKLCMK
Trigger: TTTCATGCATAGCTTGGCTCAGAAGGTGCCATTGGC...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGTCTTGGTCCATCCCCTaGACTAATCTTCAGACCTCC +
Preference number: 4 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLSWSIP*TNLQTS
Trigger: GGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGA...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCAAGCGATTCAACCCACTaGAGCGAGAAGGGGACCGGT +
Preference number: 4 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSASDSTH*SEKGTG
Trigger: ACCGGTCCCCTTCTCGCTGCAGTGGGTTGAATCGCT...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGTATGCGCGGTCACTCTaGCATCTGGTGGTTATGCTT +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEYARSL*HLVVML
Trigger: AAGCATAACCACCAGATGGCAGAGTGACCGCGCATA...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp GCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATACAATGTTGTGCCGCTaGTCACCCTCGTACACTGGG +
Preference number: 4 (lower is better)
Translates to: AFQNCFILGSRYARSLCHTMLCR*SPSYTG
Trigger: CCCAGTGTACGAGGGTGACCAGCGGCACAACATTGT...ATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAAAGTGGTCATGATGGCTaGGACGCCATAGTAAGTAAA +
Preference number: 4 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQSGHDG*DAIVSK
Trigger: TTTACTTACTATGGCGTCCCAGCCATCATGACCACT...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCAGGTGAGCTGTCCATGTaGCAGGCAGTGAGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAGELSM*QAVSAF
Trigger: GAACGCACTCACTGCCTGCCACATGGACAGCTCACC...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACGGTACACTACCTCGCTaGGGCTTCTCAGCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENGTLPR*GFSARL
Trigger: CAGACGGGCTGAGAAGCCCCAGCGAGGTAGTGTACC...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp GCTGTGGAAAAGACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTACTGATGCTGCTCTCGTaGGAACGGCTGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: AVEKTISSMFYQRHLLLLLMLLS*ERLQET
Trigger: TGTCTCCTGCAGCCGTTCCCACGAGAGCAGCATCAG...TAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGTCTTTTCCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAAACTGCCCCAGGCTGCTaGAACCCTTATCTAACAGGA +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKTAPGC*NPYLTG
Trigger: TCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGT...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATGGTGTAGTAAGGGGGTaGGAGAAGGACAAATGCATG +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHGVVRG*EKDKCM
Trigger: CATGCATTTGTCCTTCTCCCACCCCCTTACTACACC...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCTACTTCCACACGCTGTaGCCCTCCTGTCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAIYFHTL*PSCLQH
Trigger: GTGTTGCAGACAGGAGGGCCACAGCGTGTGGAAGTA...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAAGGCAAGAGCAGGTGTTaGGACTGGATGACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKGKSRC*DWMTVK
Trigger: CTTCACAGTCATCCAGTCCCAACACCTGCTCTTGCC...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAAGGGCCAGTGGTCAGCTaGGCAAGAAGCCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQGPVVS*ARSLHD
Trigger: ATCATGCAGGCTTCTTGCCCAGCTGACCACTGGCCC...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAACGAAGGCCAAGTCCTTaGCAAATAAAATGTCCACAA +
Preference number: 4 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQRRPSP*QIKCPQ
Trigger: TTGTGGACATTTTATTTGTCAAGGACTTGGCCTTCG...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATGCTGAGGATGTGGACTaGGTAGTCAGGCATGTAGAG +
Preference number: 4 (lower is better)
Translates to: AFQNCFILGSRYARSLCHAEDVD*VVRHVE
Trigger: CTCTACATGCCTGACTACTCAGTCCACATCCTCAGC...ATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CAGCTTGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAAAAGACCAAACTGCACATCGCTaGGGATGTGGACTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QLAVRHLFSSPRLCCGKDQTAHR*GCGLSS
Trigger: ACTACTCAGTCCACATCCTCAGCGATGTGCAGTTTG...GTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GCTGTGGAAAAGACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATCATTTCTTCCTGGGTaGAGGCCAGCTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: AVEKTISSMFYQRHLLLLSFLPG*RPAPPS
Trigger: GGATGGAGGAGCTGGCCTTCACCCAGGAAGAAATGA...TAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGTCTTTTCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAAGAATTATTGATCGATTaGAGACTGCTGATTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQELLID*RLLIGS
Trigger: GCTCCCAATCAGCAGTCTTCAATCGATCAATAATTC...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTTCTCGTGGGAACGGCTaGAGGAGACAGCGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLSRGNG*RRQREL
Trigger: CAGCTCACGCTGTCTCCTGCAGCCGTTCCCACGAGA...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATCCCATGTGCCTGTCTaGCAATGGCACCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSASHVPV*QWHLLS
Trigger: GCTCAGAAGGTGCCATTGGCAGACAGGCACATGGGA...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAAGGTTATGCTTGGAATTaGACCTGCCCCAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKGYAWN*TCPNFR
Trigger: CCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACC...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGAAACCTGTCTCGAACTaGCCAGTATCCACTTCACTC +
Preference number: 4 (lower is better)
Translates to: VTGSIGILQRDGCNATAVKPVSN*PVSTSL
Trigger: GAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACGCTGGGCAAGAAGCCTaGATGATGGTAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNAGQEA*MMVVLV
Trigger: AACAAGAACTACCATCATGCAGGCTTCTTGCCCAGC...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGCACCTCCTTCTGTTATaGCCATGTCAAGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLHLLLL*PCQGSE
Trigger: CTCAGAACCTTGACATGGCCATAACAGAAGGAGGTG...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATAATCACGCGCCAACATaGCTGAGTCCCACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHNHAPT*LSPTSL
Trigger: TAAAGAAGTGGGACTCAGCCATGTTGGCGCGTGATT...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CAGCTTGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAAAAGACTCTGGTGGTTATGCTTaGAATTGCACCTGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: QLAVRHLFSSPRLCCGKDSGGYA*NCTCPN
Trigger: GTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGA...GTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 72 bp CTCACCATTTATTGGTTTGGGTCTAAGTACCCAACATaGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LTIYWFGSKYPT*RADTSPVPTRQ
Trigger: TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCCAAACCAATAAATGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTCTTGGGGGAAGCAGATaGTGGGAGGGTGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCLGGSR*WEGGFS
Trigger: GGAGAATCCACCCTCCCATCATCTGCTTCCCCCAAG...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGCCCACTGAAGTCCCATaGGATTATGTATCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARPTEVP*DYVSFL
Trigger: CAAGAAAGATACATAATCTCATGGGACTTCAGTGGG...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGCTGTGTAACTCCCACTaGAGTCCCATGAGATTATGT +
Preference number: 4 (lower is better)
Translates to: VTGSIGILQRDGCNATAVLCNSH*SPMRLC
Trigger: ACATAATCTCATGGGACTTCAGTGGGAGTTACACAG...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACTCTCCCTCCTGCCTGTaGATGACTCAATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENSPSCL*MTQWVW
Trigger: CCACACCCATTGAGTCATTCACAGGCAGGAGGGAGA...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAAGTAAGCATTTTCTTTTaGGATGCAGATAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQVSIFF*DADNPE
Trigger: CTCTGGGTTATCTGCATCTCAAAAGAAAATGCTTAC...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CAGCTTGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAAAAGACCAAGTTAAGAACCCCTaGGTTAACAGTTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QLAVRHLFSSPRLCCGKDQVKNP*VNSSCG
Trigger: CCCACAGGAACTGTTAACTCAGGGGTTCTTAACTTG...GTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GCTGTGGAAAAGACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTAATGTCCACAATGTTGTaGCGCTGGTCACCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: AVEKTISSMFYQRHLLLLMSTML*RWSPSY
Trigger: GTACGAGGGTGACCAGCGGCACAACATTGTGGACAT...TAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGTCTTTTCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GCTGTGGAAAAGACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTAAGAGGTTGTTGCTGCTaGTGTACAGCTGGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: AVEKTISSMFYQRHLLLLRGCCC*CTAGCC
Trigger: GCAACACCCAGCTGTACAGCAGCAGCAACAACCTCT...TAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGTCTTTTCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACTCCAGTCCCAGACTATaGTGTGGAAAAGACCATTTC +
Preference number: 4 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNSSPRL*CGKDHF
Trigger: GAAATGGTCTTTTCCACAGCATAGTCTGGGACTGGA...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACACTTCACTCTGCATTaGAGAAACGCTGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKHFTLH*RNAGLK
Trigger: TTTCAGCCCAGCGTTTCTGCAATGCAGAGTGAAGTG...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCGTATCCACTTCACTCTaGATTGCAGAAACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAIVSTSL*IAETLG
Trigger: GCCCAGCGTTTCTGCAATGCAGAGTGAAGTGGATAC...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GCTGTGGAAAAGACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTACCACTTCTTGGTGGGTaGCAGCCTTCCCCATCAATT +
Preference number: 4 (lower is better)
Translates to: AVEKTISSMFYQRHLLLLPLLGG*QPSPSI
Trigger: AATTGATGGGGAAGGCTGGCACCCACCAAGAAGTGG...TAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGTCTTTTCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGCAATACTCTAGGGTGTaGCGAGAATTTCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEQYSRV*REFLRT
Trigger: AGTCCTCAGAAATTCTCGGCACACCCTAGAGTATTG...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp GCTGTGGAAAAGACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTAATCTACGAGAAGTCATaGACTGCTGAGCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: AVEKTISSMFYQRHLLLLIYEKS*TAEPQA
Trigger: GGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGAT...TAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGTCTTTTCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGGAACTGTTTTATTCTTaGAAGCAGGTATGCGCGGTC +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEELFYS*KQVCAV
Trigger: GACCGCGCATACCTGCTTCCAAGAATAAAACAGTTC...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ACCTCCTTCTGTTATGGCCATGTCAAGGTTCTGAGTCGAACTGGAGGTAACGAGGTTATGTGGGGGTGTTaGTTGTACAATACTCTAGGG +
Preference number: 4 (lower is better)
Translates to: TSFCYGHVKVLSRTGGNEVMWGC*LYNTLG
Trigger: CCCTAGAGTATTGTACAACCAACACCCCCACATAAC...CTCGTTACCTCCAGTTCGACTCAGAACCTTGACATGGCCATAACAGAAGGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGAGCAGGTGTTGGGACTaGATGACTGTGAAGTTATCT +
Preference number: 4 (lower is better)
Translates to: VTGSIGILQRDGCNATAVSRCWD*MTVKLS
Trigger: AGATAACTTCACAGTCATCCAGTCCCAACACCTGCT...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACGTAATGCAACAGCAGTaGCTTGAGCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENVMQQQ*LEPGGL
Trigger: GAGGCCACCAGGCTCAAGCCACTGCTGTTGCATTAC...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp GCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATTGTATCTTTCTTGGCTaGCCTGGGCACTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: AFQNCFILGSRYARSLCHCIFLG*PGHSLV
Trigger: AACCAAAGAGTGCCCAGGTCAGCCAAGAAAGATACA...ATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTAACAAGGAGAAGTCATaGCGCTTCCGCTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCNKEKS*RFRSRC
Trigger: GCAACGGGAGCGGAAGCGGCATGACTTCTCCTTGTT...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCGTGATCTTCACAAACTaGACATCGCTGAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAIVIFTN*TSLRMW
Trigger: CCACATCCTCAGCGATGTGCAGTTTGTGAAGATCAC...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCACCTCAAAATCGCTACTaGAGGGGCTGGTCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAPQNRY*RGWSLY
Trigger: ATACAGAGACCAGCCCCTGCAGTAGCGATTTTGAGG...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACCCAGTTGGGTCTCTCTaGTCCCTGTTCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENPVGSL*SLFLLF
Trigger: GAAGAGAAGGAACAGGGAGCAGAGAGACCCAACTGG...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCCACTCTGCCATCTGGTaGTTATGCTTGGAATTGCAC +
Preference number: 4 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAIHSAIW*LCLELH
Trigger: GTGCAATTCCAAGCATAACCACCAGATGGCAGAGTG...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACGAAGGGGAGGGAAGCTaGATGGTATACTACGGGGAA +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENEGEGS*MVYYGE
Trigger: TTCCCCGTAGTATACCATCCAGCTTCCCTCCCCTTC...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAAGAAAATCTGCCAAACTaGCAGCTAGGGGTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQENLPN*QLGVKR
Trigger: TCTCTTCACCCCTAGCTGTCAGTTTGGCAGATTTTC...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATGTAAAAACAGTGACTTaGGGTTCCATCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: ILGPSPELIFRPPTPASHVKTVT*GSISHS
Trigger: AGAATGTGAGATGGAACCTCAAGTCACTGTTTTTAC...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCTCGATTGAAGACTGCTaGTTGGGAGCCAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAISIEDC*LGAKTD
Trigger: ATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGA...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTTGCACTTAAGACCTaGAGTTCCATCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAFALKT*SSISGS
Trigger: GGAGCCAGAGATGGAACTTCAGGTCTTAAGTGCAAA...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACAGTTCAGTGAGTACTTaGCTGAGAACATCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNSSVST*LRTSKE
Trigger: CTCTTTAGATGTTCTCAGTCAAGTACTCACTGAACT...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CAGCTTGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAAAAGACTCAGAGGTGTTAAATTaGAGTTGTCCTCAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QLAVRHLFSSPRLCCGKDSEVLN*SCPQRF
Trigger: GAACCTCTGAGGACAACTCCAATTTAACACCTCTGA...GTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACACGATAGGTCTCCTATaGCATCAGGGGACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENTIGLL*HQGTQR
Trigger: TCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGT...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGACTTCTTTAAAGCTCTaGGGGAAATTCTTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPETSLKL*GKFLVH
Trigger: ATGGACCAAGAATTTCCCCCAGAGCTTTAAAGAAGT...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGCTCTTTGGTTTGTCATaGCTAAACTTGCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPELFGLS*LNLLSA
Trigger: TGCTGAAAGCAAGTTTAGCCATGACAAACCAAAGAG...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATCGACCTGGGCACTCTTTaGTTTGTCATGGCTAAACTT +
Preference number: 4 (lower is better)
Translates to: LFRTVLFLEAGMRGHSAIDLGTL*FVMAKL
Trigger: AAGTTTAGCCATGACAAACCAAAGAGTGCCCAGGTC...GATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTAGCTGCTGTGTGCTGTaGTCCTCGAAGTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLSCCVL*SSKSVI
Trigger: AATGACTGACTTCGAGGAGCACAGCACACAGCAGCT...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACGCTTGGAATTGCACCTaGCCCAACTTCAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENAWNCT*PNFRRK
Trigger: TTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGC...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTACTGCGCTCTCGGTTTaGAGACTCAGAGCGATTCAA +
Preference number: 4 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLTALSV*RLRAIQ
Trigger: TTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGT...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp CAGCTTGCAGTCAGACATCTCTTTTCCAGTCCCAGACTATGCTGTGGAAAAGACTCTCTGTATCCAGGTTaGTGTTACAACATTCACTAT +
Preference number: 4 (lower is better)
Translates to: QLAVRHLFSSPRLCCGKDSLYPG*CYNIHY
Trigger: ATAGTGAATGTTGTAACATCAACCTGGATACAGAGA...GTCTTTTCCACAGCATAGTCTGGGACTGGAAAAGAGATGTCTGACTGCAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAATTCTCAGCAGCTTCTTaGCCACGTTTTCCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQFSAAS*PRFPQN
Trigger: ATTTTGAGGAAAACGTGGGCAAGAAGCTGCTGAGAA...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 72 bp CTGTTCCTTCTCTTCCAGAGCAGAATTATTGATCGATaGAAGACTGCTGATTGGGAGCCAAAACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: LFLLFQSRIIDR*KTADWEPKQMC
Trigger: ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCTCTGGAAGAGAAGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
3UTR CAA 72 bp ATGTATCTTTCTTGGCTGACCTGGGCACTCTTTGGTTaGTCATGGCTAAACTTGCTTTCAGCACTTACAGTT +
Preference number: 4 (lower is better)
Translates to: MYLSWLTWALFG*SWLNLLSALTV
Trigger: AACTGTAAGTGCTGAAAGCAAGTTTAGCCATGACAAACCAAAGAGTGCCCAGGTCAGCCAAGAAAGATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTCTTTGCCCTGTCATGTaGTCAGAGGTGTTAAATTGG +
Preference number: 4 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCLCPVM*SEVLNW
Trigger: CCAATTTAACACCTCTGATCACATGACAGGGCAAAG...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR TCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACGCAGAAACGCTGGGCTaGAAGTTCCACTATTTAAAA +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENAETLG*KFHYLK
Trigger: TTTTAAATAGTGGAACTTTCAGCCCAGCGTTTCTGC...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTGCCCGGCTTTGCGGTTaGTTTTCAGAACTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCARLCG*FSELFY
Trigger: ATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGC...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTTCAAACTTCAGCTCCTaGATCACGTTGGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLSNFSS*ITLGCF
Trigger: GAAACATCCCAACGTGATCCAGGAGCTGAAGTTTGA...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCAATTATGTATCTTTCTTaGCTGACCTGGGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAIMYLS*LTWALF
Trigger: AAAGAGTGCCCAGGTCAGCCAAGAAAGATACATAAT...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTGGGGACAAAGTTATGTaGGGGTGTTGGTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCGDKVM*GCWLYN
Trigger: ATTGTACAACCAACACCCCCACATAACTTTGTCCCC...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR GCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACACTAACAGTTTTCTGTaGTGTAATGTCAATCACGCG +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENTNSFL*CNVNHA
Trigger: CGCGTGATTGACATTACAGCACAGAAAACTGTTAGT...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTTCCCAGACTATGCTGTaGAAAAGACCATTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCSQTML*KRPFLA
Trigger: TGCTAGAAATGGTCTTTTCCACAGCATAGTCTGGGA...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTTTGAAGACTGCTGATTaGGAGCCAAAACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLLKTAD*EPKQMC
Trigger: ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAA...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAAAAACTCACCATTTATTaGTTTGGGTCTAAGTACCCA +
Preference number: 4 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQKLTIY*FGSKYP
Trigger: TGGGTACTTAGACCCAAACCAATAAATGGTGAGTTT...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp AGATTTAGCAGACAGCACTCGATCAATGAGTTCAGTGAGTACTTGACTGAGAACGTTAACATTTTGTTCTaGAGGAAAGAATGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: RFSRQHSINEFSEYLTENVNILF*RKEWQV
Trigger: AACTTGCCATTCTTTCCTCCAGAACAAAATGTTAAC...GTTCTCAGTCAAGTACTCACTGAACTCATTGATCGAGTGCTGTCTGCTAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CCA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTGATCCAGTAAGTTCTTaGAATAAAGTACACTCAGCT +
Preference number: 4 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLDPVSS*NKVHSA
Trigger: AGCTGAGTGTACTTTATTCCAAGAACTTACTGGATC...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 90 bp CCGCCCCGCTCCGCTTCGCCCTTGCGCAGCTCCCGCACTCGCACCTaGACCAGGGCCGAGCCTGCCACGCCCCCGGGACGCAAGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PPRSASPLRSSRTRT*TRAEPATPPGRKGP
Trigger: GGGGCCCTTGCGTCCCGGGGGCGTGGCAGGCTCGGCCCTGGTCCAGGTGCGAGTGCGGGAGCTGCGCAAGGGCGAAGCGGAGCGGGGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp TGGGTCCCCCTGCCGCGAACGGCCTGCACGCGGCGCGCCTGCTCCTaGTCGGCGGCCGAGCCGCTGTTCCGCAGCACCCGTAACTCCACC +
Preference number: 5 (lower is better)
Translates to: WVPLPRTACTRRACS*SAAEPLFRSTRNST
Trigger: GGTGGAGTTACGGGTGCTGCGGAACAGCGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTTCGCGGCAGGGGGACCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp GCCCTTGCGCAGCTCCCGCACTCGCACCTGGACCAGGGCCGAGCCTaGCACGCCCCCGGGACGCAAGGGCCCCAGGACTTCCACGTCCGA +
Preference number: 5 (lower is better)
Translates to: ALAQLPHSHLDQGRA*HAPGTQGPQDFHVR
Trigger: TCGGACGTGGAAGTCCTGGGGCCCTTGCGTCCCGGGGGCGTGGCAGGCTCGGCCCTGGTCCAGGTGCGAGTGCGGGAGCTGCGCAAGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp CGCGGGCGAACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTGGTGGTaGCACGCGCGCCCATCCCAGGCGCAGAGTGAAAAGAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: RGRTRSRKPPAAPWW*HARPSQAQSEKSFP
Trigger: CGGGAAGCTCTTTTCACTCTGCGCCTGGGATGGGCGCGCGTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTTCGCCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp AGCAGATGGGTCCCCCTGCCGCGAACGGCCTGCACGCGGCGCGCCTaGTCCTGCTCGGCGGCCGAGCCGCTGTTCCGCAGCACCCGTAAC +
Preference number: 5 (lower is better)
Translates to: SRWVPLPRTACTRRA*SCSAAEPLFRSTRN
Trigger: GTTACGGGTGCTGCGGAACAGCGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTTCGCGGCAGGGGGACCCATCTGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 90 bp GCCGCGTTGGCTCCGGCTTGGCCCAGGAGTAGGGTGCAGAGCAGATaGGTCCCCCTGCCGCGAACGGCCTGCACGCGGCGCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AALAPAWPRSRVQSR*VPLPRTACTRRACS
Trigger: GGAGCAGGCGCGCCGCGTGCAGGCCGTTCGCGGCAGGGGGACCCATCTGCTCTGCACCCTACTCCTGGGCCAAGCCGGAGCCAACGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp AGCCAGCCAGGGCCGCGTTGGCTCCGGCTTGGCCCAGGAGTAGGGTaGAGAGCAGATGGGTCCCCCTGCCGCGAACGGCCTGCACGCGGC +
Preference number: 5 (lower is better)
Translates to: SQPGPRWLRLGPGVG*RADGSPCRERPARG
Trigger: GCCGCGTGCAGGCCGTTCGCGGCAGGGGGACCCATCTGCTCTGCACCCTACTCCTGGGCCAAGCCGGAGCCAACGCGGCCCTGGCTGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 90 bp AACCGCGGGCGAACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTGGTaGTGCCACGCGCGCCCATCCCAGGCGCAGAGTGAAAAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: NRGRTRSRKPPAAPW*CHARPSQAQSEKSF
Trigger: GAAGCTCTTTTCACTCTGCGCCTGGGATGGGCGCGCGTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTTCGCCCGCGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 90 bp TACAACCGCGGGCGAACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTaGTGGTGCCACGCGCGCCCATCCCAGGCGCAGAGTGAAAAGAGC +
Preference number: 5 (lower is better)
Translates to: YNRGRTRSRKPPAAP*WCHARPSQAQSEKS
Trigger: GCTCTTTTCACTCTGCGCCTGGGATGGGCGCGCGTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTTCGCCCGCGGTTGTA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp CGGAGCCCAGTCGCCGGTGCCATTCTCCCCCGAGTTGAGGGTCGGTaGGGGCACCGGTGCGGCGGTGGCCGGCGGTCCTGGCTGGAAATA +
Preference number: 5 (lower is better)
Translates to: RSPVAGAILPRVEGR*GHRCGGGRRSWLEI
Trigger: TATTTCCAGCCAGGACCGCCGGCCACCGCCGCACCGGTGCCCTCACCGACCCTCAACTCGGGGGAGAATGGCACCGGCGACTGGGCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp GTAACTCCACCGGGTCCAGCGACAGCAGGCTCAGGCGCAGGCCGCTaGACAGGGCCGACAAGGCTAGCAGCAGGAGCGCCCCGAGCGCCC +
Preference number: 5 (lower is better)
Translates to: VTPPGPATAGSGAGR*TGPTRLAAGAPRAP
Trigger: GGGCGCTCGGGGCGCTCCTGCTGCTAGCCTTGTCGGCCCTGTTCAGCGGCCTGCGCCTGAGCCTGCTGTCGCTGGACCCGGTGGAGTTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp AATAGACACGCAGGAGGAAGCTGGTGCCTTCGGCGGCGCGCAGGGTaGCCCCCTCCAGGGACACGCGGCCTCCAGCAGTGTCCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: NRHAGGSWCLRRRAG*PPPGTRGLQQCPRA
Trigger: GGCCCGAGGACACTGCTGGAGGCCGCGTGTCCCTGGAGGGGGGCACCCTGCGCGCCGCCGAAGGCACCAGCTTCCTCCTGCGTGTCTATT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp CCAGTCCAGCAGGCGGCCCAGCGGGTAGCACACGGGGAAGGCGGCTaGCATCAGAAGCCGGGTCAGGCACACGCTGTGCGAGGCGATGGC +
Preference number: 5 (lower is better)
Translates to: PVQQAAQRVAHGEGG*HQKPGQAHAVRGDG
Trigger: GCCATCGCCTCGCACAGCGTGTGCCTGACCCGGCTTCTGATGGCAGCCGCCTTCCCCGTGTGCTACCCGCTGGGCCGCCTGCTGGACTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 90 bp AGCCCGGCGGCAGCGAGGTGTACAGCCAGCCAGCCAGGGCCGCGTTaGCTCCGGCTTGGCCCAGGAGTAGGGTGCAGAGCAGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: SPAAARCTASQPGPR*LRLGPGVGCRADGS
Trigger: GGACCCATCTGCTCTGCACCCTACTCCTGGGCCAAGCCGGAGCCAACGCGGCCCTGGCTGGCTGGCTGTACACCTCGCTGCCGCCGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp GCACACGCTGTGCGAGGCGATGGCCAGCCCGTGCCGCGAACACACTaGGTAGGGGCAGATTTCGGCGCCCAGGAATACCGCGCCGGTGCA +
Preference number: 5 (lower is better)
Translates to: AHAVRGDGQPVPRTH*VGADFGAQEYRAGA
Trigger: TGCACCGGCGCGGTATTCCTGGGCGCCGAAATCTGCCCCTACTCAGTGTGTTCGCGGCACGGGCTGGCCATCGCCTCGCACAGCGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp ACACTGAGTAGGGGCAGATTTCGGCGCCCAGGAATACCGCGCCGGTaGACACGAGCGCCGGCAGCCACGGGAAGTGGATCCCCTCTTCGC +
Preference number: 5 (lower is better)
Translates to: TLSRGRFRRPGIPRR*TRAPAATGSGSPLR
Trigger: GCGAAGAGGGGATCCACTTCCCGTGGCTGCCGGCGCTCGTGTGCACCGGCGCGGTATTCCTGGGCGCCGAAATCTGCCCCTACTCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 90 bp CGGCTGCCATCAGAAGCCGGGTCAGGCACACGCTGTGCGAGGCGATaGCCAGCCCGTGCCGCGAACACACTGAGTAGGGGCAGATTTCGG +
Preference number: 5 (lower is better)
Translates to: RLPSEAGSGTRCARR*PARAANTLSRGRFR
Trigger: CCGAAATCTGCCCCTACTCAGTGTGTTCGCGGCACGGGCTGGCCATCGCCTCGCACAGCGTGTGCCTGACCCGGCTTCTGATGGCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp CTCGTGGGAACGGCTGCAGGAGACAGCGTGAGCTGCTGTGTGCTGTaGTCCTCGAAGTCAGTCATTTCTTCCTGGGTGAAGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LVGTAAGDSVSCCVL*SSKSVISSWVKASS
Trigger: GGAGCTGGCCTTCACCCAGGAAGAAATGACTGACTTCGAGGAGCACAGCACACAGCAGCTCACGCTGTCTCCTGCAGCCGTTCCCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 90 bp GTACAGCTGGGTGTTGCTGCCCCCAAAGTCACTGCGCTCTCGGTTTaGAGACTCAGAGCGATTCAACCCACTGCAGCGAGAAGGGGACCG +
Preference number: 5 (lower is better)
Translates to: VQLGVAAPKVTALSV*RLRAIQPTAARRGP
Trigger: CGGTCCCCTTCTCGCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACCCAGCTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS TCA 90 bp GCTGCTGTGTGCTGTGCTCCTCGAAGTCAGTCATTTCTTCCTGGGTaGAGGCCAGCTCCTCCATCCTCAGGTACACTACCTCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: AAVCCAPRSQSFLPG*RPAPPSSGTLPRWG
Trigger: GCCCCAGCGAGGTAGTGTACCTGAGGATGGAGGAGCTGGCCTTCACCCAGGAAGAAATGACTGACTTCGAGGAGCACAGCACACAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp AGTGGAGTCCCCGTCTGTGAAGGCCTCCATGTCAGGGGACTGAGGTaGGCTGTCCATGTGGCAGGCAGTGAGTGCGTTCTGATATTGCTG +
Preference number: 5 (lower is better)
Translates to: SGVPVCEGLHVRGLR*AVHVAGSECVLILL
Trigger: CAGCAATATCAGAACGCACTCACTGCCTGCCACATGGACAGCTCACCTCAGTCCCCTGACATGGAGGCCTTCACAGACGGGGACTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp AAATGTCCACAATGTTGTGCCGCTGGTCACCCTCGTACACTGGGATaGGAGTGTAGCCGCTGCGCAGGATCTCGGAGACAGTGGCGAAGT +
Preference number: 5 (lower is better)
Translates to: KCPQCCAAGHPRTLG*ECSRCAGSRRQWRS
Trigger: ACTTCGCCACTGTCTCCGAGATCCTGCGCAGCGGCTACACTCGCATCCCAGTGTACGAGGGTGACCAGCGGCACAACATTGTGGACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp TGTTGCTGCTGCTGTACAGCTGGGTGTTGCTGCCCCCAAAGTCACTaGGCTCTCGGTTTGGAGACTCAGAGCGATTCAACCCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: CCCCCTAGCCCPQSH*ALGLETQSDSTHCS
Trigger: GCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACCCAGCTGTACAGCAGCAGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS GCA 90 bp TCTGATGCTGCTCTCGTGGGAACGGCTGCAGGAGACAGCGTGAGCTaGTGTGTGCTGTGCTCCTCGAAGTCAGTCATTTCTTCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SDAALVGTAAGDSVS*CVLCSSKSVISSWV
Trigger: CACCCAGGAAGAAATGACTGACTTCGAGGAGCACAGCACACAGCAGCTCACGCTGTCTCCTGCAGCCGTTCCCACGAGAGCAGCATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CTCCTGACTTCAAGTGATCCACCCGCCTCGGTCTTCCAAACTGTTGGGATTACACCATTCTCCCCCGAGTaGAGGGTCGGTGAGGGCACC +
Preference number: 5 (lower is better)
Translates to: LLTSSDPPASVFQTVGITPFSPE*RVGEGT
Trigger: GGTGCCCTCACCGACCCTCAACTCGGGGGAGAATGG...TGTAATCCCAACAGTTTGGAAGACCGAGGCGGGTGGATCACTTGAAGTCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCACCAGCCAGGGCCGCGTaGGCTCCGGCTTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSAPARAA*APAWPR
Trigger: CCTGGGCCAAGCCGGAGCCAACGCGGCCCTGGCTGG...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp CAGGCATGTAGAGGTTGTTGCTGCTGCTGTACAGCTGGGTGTTGCTaGCCCCAAAGTCACTGCGCTCTCGGTTTGGAGACTCAGAGCGAT +
Preference number: 5 (lower is better)
Translates to: QACRGCCCCCTAGCC*PQSHCALGLETQSD
Trigger: ATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACCCAGCTGTACAGCAGCAGCAACAACCTCTACATGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS GCA 90 bp AGTCAGGCATGTAGAGGTTGTTGCTGCTGCTGTACAGCTGGGTGTTaGTGCCCCCAAAGTCACTGCGCTCTCGGTTTGGAGACTCAGAGC +
Preference number: 5 (lower is better)
Translates to: SQACRGCCCCCTAGC*CPQSHCALGLETQS
Trigger: GCTCTGAGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACCCAGCTGTACAGCAGCAGCAACAACCTCTACATGCCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS CCA 90 bp GTGAGCTGCTGTGTGCTGTGCTCCTCGAAGTCAGTCATTTCTTCCTaGGTGAAGGCCAGCTCCTCCATCCTCAGGTACACTACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: VSCCVLCSSKSVISS*VKASSSILRYTTSL
Trigger: CAGCGAGGTAGTGTACCTGAGGATGGAGGAGCTGGCCTTCACCCAGGAAGAAATGACTGACTTCGAGGAGCACAGCACACAGCAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGCCGCTTCCGCTCCCGTaGCGGGACCCTCTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARPLPLP*RDPLLF
Trigger: AAAAAGCAGAGGGTCCCGCAACGGGAGCGGAAGCGG...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CCAGCTGAGACATACTGCCCCAGGCTGCTGGAACCCTTATCTAACAGGAAACCAGAGGACTTCCACTTCTaGGTGGGTGCCAGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: PAETYCPRLLEPLSNRKPEDFHF*VGASLP
Trigger: GGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTC...TGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp CACTATCTGATGCTGCTCTCGTGGGAACGGCTGCAGGAGACAGCGTaGGCTGCTGTGTGCTGTGCTCCTCGAAGTCAGTCATTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: HYLMLLSWERLQETA*AAVCCAPRSQSFLP
Trigger: AGGAAGAAATGACTGACTTCGAGGAGCACAGCACACAGCAGCTCACGCTGTCTCCTGCAGCCGTTCCCACGAGAGCAGCATCAGATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp TTCACCCGCATCTCCGTGTCCGAAAGCTTAAACAAGGAGAAGTCATaGCGCTTCCGCTCCCGTTGCGGGACCCTCTGCTTTTTCCGATTG +
Preference number: 5 (lower is better)
Translates to: FTRISVSESLNKEKS*RFRSRCGTLCFFRL
Trigger: CAATCGGAAAAAGCAGAGGGTCCCGCAACGGGAGCGGAAGCGGCATGACTTCTCCTTGTTTAAGCTTTCGGACACGGAGATGCGGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGACCTCCTCCACAACTTaGGTGCGCAGCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: HRARLCGCFSELFYSWKQTSSTT*VRSSRA
Trigger: TGCCCTGGAGCTGCGCACCAAAGTTGTGGAGGAGGT...CTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 90 bp AGTCACTGCGCTCTCGGTTTGGAGACTCAGAGCGATTCAACCCACTaGAGCGAGAAGGGGACCGGTTTAGAAAGACAGAAGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SHCALGLETQSDSTH*SEKGTGLERQKIQP
Trigger: TGGCTGGATCTTCTGTCTTTCTAAACCGGTCCCCTTCTCGCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CCAGCTGAGACATACTGCCCCAGGCTGCTGGAACCCTTATCTAACAGGAAACCACACTGCGCTCTCGGTTaGGAGACTCAGAGCGATTCA +
Preference number: 5 (lower is better)
Translates to: PAETYCPRLLEPLSNRKPHCALG*ETQSDS
Trigger: TGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTG...TGGTTTCCTGTTAGATAAGGGTTCCAGCAGCCTGGGGCAGTATGTCTCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGTGCAACAGCAGTGGCTaGAGCCTGGTGGCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLCNSSG*SLVASG
Trigger: ACCTGAGGCCACCAGGCTCAAGCCACTGCTGTTGCA...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 90 bp TTGGGGGAAGCAGATGATGGGAGGGTGGATTCTCCCCCAAAGCTCTaGAATTTCACACACCCAGTGAATGCTGGCTTTGCCCTGTCATGT +
Preference number: 5 (lower is better)
Translates to: LGEADDGRVDSPPKL*NFTHPVNAGFALSC
Trigger: ACATGACAGGGCAAAGCCAGCATTCACTGGGTGTGTGAAATTCCAGAGCTTTGGGGGAGAATCCACCCTCCCATCATCTGCTTCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAAAAAATGTCCACAATGTaGTGCCGCTGGTCACCCTCG +
Preference number: 5 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQKMSTM*CRWSPS
Trigger: CGAGGGTGACCAGCGGCACAACATTGTGGACATTTT...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCACCGCGCCCGGCTTaGCGGTTGCTTTTCAGAACT +
Preference number: 5 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKPPRPA*RLLFRT
Trigger: AGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTGG...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp CTGCCGTGTGATCTTCACAAACTGCACATCGCTGAGGATGTGGACTaGGTAGTCAGGCATGTAGAGGTTGTTGCTGCTGCTGTACAGCTG +
Preference number: 5 (lower is better)
Translates to: LPCDLHKLHIAEDVD*VVRHVEVVAAAVQL
Trigger: CAGCTGTACAGCAGCAGCAACAACCTCTACATGCCTGACTACTCAGTCCACATCCTCAGCGATGTGCAGTTTGTGAAGATCACACGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp TGGGGGAGTTACCTTCACAAACTGCACATCGCTGAGGATGTGGACTaGGTAGTCAGGCATGTAGAGGTTGTTGCTGCTGCTGTACAGCTG +
Preference number: 5 (lower is better)
Translates to: WGSYLHKLHIAEDVD*VVRHVEVVAAAVQL
Trigger: CAGCTGTACAGCAGCAGCAACAACCTCTACATGCCTGACTACTCAGTCCACATCCTCAGCGATGTGCAGTTTGTGAAGGTAACTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488090.1
CDS-3UTR CAA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAAGAGTGCGTTCTGATATaGCTGCCGTGTGATCTTCAC +
Preference number: 5 (lower is better)
Translates to: PRISEDFHFLVGASLPHQECVLI*LPCDLH
Trigger: GTGAAGATCACACGGCAGCAATATCAGAACGCACTC...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CCGAGAATTTCTGAGGACTTCCACTTCTTGGTGGGTGCCAGCCTTCCCCATCAACGCCCGGCTTTGCGGTaGCTTTTCAGAACTGTTTTA +
Preference number: 5 (lower is better)
Translates to: PRISEDFHFLVGASLPHQRPALR*LFRTVL
Trigger: TAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCG...TTGATGGGGAAGGCTGGCACCCACCAAGAAGTGGAAGTCCTCAGAAATTCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp AGGATAACCTTCCTGGGGGAGTTACCTTCACAAACTGCACATCGCTaGGGATGTGGACTGAGTAGTCAGGCATGTAGAGGTTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RITFLGELPSQTAHR*GCGLSSQACRGCCC
Trigger: GCAGCAACAACCTCTACATGCCTGACTACTCAGTCCACATCCTCAGCGATGTGCAGTTTGTGAAGGTAACTCCCCCAGGAAGGTTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488090.1
CDS-3UTR CAA 90 bp TGCCATCTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAAGCACCCTGTATGATGTaGAGCTCCTCCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: CHLVVMLGIAPAPTSGEKAPCMM*SSSFTR
Trigger: CCTGGTGAAGGAGGAGCTCAACATCATACAGGGTGC...TTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ACCTCCTTCTGTTATGGCCATGTCAAGGTTCTGAGTCGAACTGGAGGTAACGAGCAGAGTCTCGCTCTGTaGCCTAGGATGAAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: TSFCYGHVKVLSRTGGNEQSLAL*PRMKCS
Trigger: ACTGCACTTCATCCTAGGCAACAGAGCGAGACTCTG...CTCGTTACCTCCAGTTCGACTCAGAACCTTGACATGGCCATAACAGAAGGAGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ACCTCCTTCTGTTATGGCCATGTCAAGGTTCTGAGTCGAACTGGAGGTAACGAGCCACTTCACTCTGCATaGCAGAAACGCTGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: TSFCYGHVKVLSRTGGNEPLHSA*QKRWAE
Trigger: TTCAGCCCAGCGTTTCTGCAATGCAGAGTGAAGTGG...CTCGTTACCTCCAGTTCGACTCAGAACCTTGACATGGCCATAACAGAAGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACAGGCAAGAGCAGGTGTaGGGACTGGATGACTGTGAA +
Preference number: 5 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNRQEQV*GLDDCE
Trigger: TTCACAGTCATCCAGTCCCAACACCTGCTCTTGCCT...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp GGAGGGTGGATTCTCCCCCAAAGCTCTGGAATTTCACACACCCAGTaGATGCTGGCTTTGCCCTGTCATGTGATCAGAGGTGTTAAATTG +
Preference number: 5 (lower is better)
Translates to: GGWILPQSSGISHTQ*MLALPCHVIRGVKL
Trigger: CAATTTAACACCTCTGATCACATGACAGGGCAAAGCCAGCATTCACTGGGTGTGTGAAATTCCAGAGCTTTGGGGGAGAATCCACCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CCACTTATGATTAAAAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCACTGTACAGCTGGGTGTaGCTGCCCCCAAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: PLMIKNLSRTAQYPLHSALYSWV*LPPKSL
Trigger: CAGTGACTTTGGGGGCAGCAACACCCAGCTGTACAG...TGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTTTTAATCATAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATGGTCCCAGAGTGGCATaGTCAGCTTGCAGTCAGACA +
Preference number: 5 (lower is better)
Translates to: AFQNCFILGSRYARSLCHGPRVA*SACSQT
Trigger: TGTCTGACTGCAAGCTGACAATGCCACTCTGGGACC...ATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GGGTCTAAGTACCCAACATTGAGGGCTGACACTTCGCCTGTTCCTACCAGGCAATGGGCACTCTTTGGTTaGTCATGGCTAAACTTGCTT +
Preference number: 5 (lower is better)
Translates to: GSKYPTLRADTSPVPTRQWALFG*SWLNLL
Trigger: AAGCAAGTTTAGCCATGACAAACCAAAGAGTGCCCA...TTGCCTGGTAGGAACAGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGTGGTTATGCTTGGAATaGCACCTGCCCCAACTTCAG +
Preference number: 5 (lower is better)
Translates to: VTGSIGILQRDGCNATAVWLCLE*HLPQLQ
Trigger: CTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCA...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp TTTCCTCAAAATCGCTACTGCAGGGGCTGGTCTCTGTATCCAGGTTaGTGTTACAACATTCACTATCTGATGCTGCTCTCGTGGGAACGG +
Preference number: 5 (lower is better)
Translates to: FPQNRYCRGWSLYPG*CYNIHYLMLLSWER
Trigger: CCGTTCCCACGAGAGCAGCATCAGATAGTGAATGTTGTAACATCAACCTGGATACAGAGACCAGCCCCTGCAGTAGCGATTTTGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATTCCAGTCGGGTGTCATaGAAAACACAATGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: AFQNCFILGSRYARSLCHSSRVS*KTQCRG
Trigger: GCCCCTGCATTGTGTTTTCAATGACACCCGACTGGA...ATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTAGGCTGTTCCTGTTGTaGAGGAGCGTGATGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLRLFLL*RSVMAG
Trigger: CCCCGCCATCACGCTCCTCAACAACAGGAACAGCCT...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp AAACCTGTCTCGAACTGCCCAGTATCCACTTCACTCTGCATTGCAGAAACGCTGGTTCTCAGCAGCTTCTaGCCCACGTTTTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: KPVSNCPVSTSLCIAETLVLSSF*PTFSSK
Trigger: TTTTGAGGAAAACGTGGGCAAGAAGCTGCTGAGAAC...CAGCGTTTCTGCAATGCAGAGTGAAGTGGATACTGGGCAGTTCGAGACAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CACCGCGCCCGGCTTTGCGGTTGCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGATTATGTATCTTTCTaGGCTGACCTGGGCACTCTT +
Preference number: 5 (lower is better)
Translates to: HRARLCGCFSELFYSWKQDYVSF*ADLGTL
Trigger: AAGAGTGCCCAGGTCAGCCAAGAAAGATACATAATC...CTGCTTCCAAGAATAAAACAGTTCTGAAAAGCAACCGCAAAGCCGGGCGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ACCTCCTTCTGTTATGGCCATGTCAAGGTTCTGAGTCGAACTGGAGGTAACGAGGGCTCCATAGGGATTTaGCAAAGGGATGGGTGTAAT +
Preference number: 5 (lower is better)
Translates to: TSFCYGHVKVLSRTGGNEGSIGI*QRDGCN
Trigger: ATTACACCCATCCCTTTGCAAAATCCCTATGGAGCC...CTCGTTACCTCCAGTTCGACTCAGAACCTTGACATGGCCATAACAGAAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 90 bp CTGGAATTTCACACACCCAGTGAATGCTGGCTTTGCCCTGTCATGTaGTCAGAGGTGTTAAATTGGAGTTGTCCTCAGAGGTTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LEFHTPSECWLCPVM*SEVLNWSCPQRFSL
Trigger: GAGAGAGAACCTCTGAGGACAACTCCAATTTAACACCTCTGATCACATGACAGGGCAAAGCCAGCATTCACTGGGTGTGTGAAATTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTAGCTCCTGGATCACGTaGGGATGTTTCAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCSSWIT*GCFRSR
Trigger: CCGGCTCCTGAAACATCCCAACGTGATCCAGGAGCT...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATGGTGTTAAATTGGAGTaGTCCTCAGAGGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ILGPSPELIFRPPTPASHGVKLE*SSEVLS
Trigger: AGAGAGAACCTCTGAGGACAACTCCAATTTAACACC...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GTGACAGGCTCCATAGGGATTTTGCAAAGGGATGGGTGTAATGCAACAGCAGTGAGTGGCATTGTCAGCTaGCAGTCAGACATCTCTTTT +
Preference number: 5 (lower is better)
Translates to: VTGSIGILQRDGCNATAVSGIVS*QSDISF
Trigger: AAAAGAGATGTCTGACTGCAAGCTGACAATGCCACT...CACTGCTGTTGCATTACACCCATCCCTTTGCAAAATCCCTATGGAGCCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp AATGGCAAGTTCCAAGACGATAGGTCTCCTATGGCATCAGGGGACCCAAAGAACACTACGGGGAAAGGTTaGGGAATGGTTTGGAGATTT +
Preference number: 5 (lower is better)
Translates to: NGKFQDDRSPMASGDPKNTTGKG*GMVWRF
Trigger: AAATCTCCAAACCATTCCCAAACCTTTCCCCGTAGT...GTTCTTTGGGTCCCCTGATGCCATAGGAGACCTATCGTCTTGGAACTTGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GATGACTGTGAAGTTATCTACGAGAAGTCATGCACTGCTGAGCCTCAGGCCAGGAGAATTATTGATCGATaGAAGACTGCTGATTGGGAG +
Preference number: 5 (lower is better)
Translates to: DDCEVIYEKSCTAEPQARRIIDR*KTADWE
Trigger: CTCCCAATCAGCAGTCTTCAATCGATCAATAATTCT...CCTGGCCTGAGGCTCAGCAGTGCATGACTTCTCGTAGATAACTTCACAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAATCTAAGTACCCAACATaGAGGGCTGACACTTCGCCT +
Preference number: 5 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQSKYPT*RADTSP
Trigger: AGGCGAAGTGTCAGCCCTCAATGTTGGGTACTTAGA...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CTGGTGGTTATGCTTGGAATTGCACCTGCCCCAACTTCAGGAGAAAAACCAGAGGTCTCTGTATCCAGGTaGATGTTACAACATTCACTA +
Preference number: 5 (lower is better)
Translates to: LVVMLGIAPAPTSGEKPEVSVSR*MLQHSL
Trigger: TAGTGAATGTTGTAACATCAACCTGGATACAGAGAC...CTCTGGTTTTTCTCCTGAAGTTGGGGCAGGTGCAATTCCAAGCATAACCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ATTCTTGGTCCATCCCCTGAACTAATCTTCAGACCTCCTACTCCAGCCTCCCATTTGTCATGGCTAAACTaGCTTTCAGCACTTACAGTT +
Preference number: 5 (lower is better)
Translates to: ILGPSPELIFRPPTPASHLSWLN*LSALTV
Trigger: AACTGTAAGTGCTGAAAGCAAGTTTAGCCATGACAA...ATGGGAGGCTGGAGTAGGAGGTCTGAAGATTAGTTCAGGGGATGGACCAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAAATGTGGGGGTGTTGGTaGTACAATACTCTAGGGTGT +
Preference number: 5 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQMWGCW*YNTLGC
Trigger: ACACCCTAGAGTATTGTACAACCAACACCCCCACAT...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ACCTCCTTCTGTTATGGCCATGTCAAGGTTCTGAGTCGAACTGGAGGTAACGAGTCACCATTTATTGGTTaGGGTCTAAGTACCCAACAT +
Preference number: 5 (lower is better)
Translates to: TSFCYGHVKVLSRTGGNESPFIG*GLSTQH
Trigger: ATGTTGGGTACTTAGACCCAAACCAATAAATGGTGA...CTCGTTACCTCCAGTTCGACTCAGAACCTTGACATGGCCATAACAGAAGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp GCTTTTCAGAACTGTTTTATTCTTGGAAGCAGGTATGCGCGGTCACTCTGCCATATCAGAGGTGTTAAATaGGAGTTGTCCTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: AFQNCFILGSRYARSLCHIRGVK*ELSSEV
Trigger: AACCTCTGAGGACAACTCCAATTTAACACCTCTGAT...ATGGCAGAGTGACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp AGCAGAATTATTGATCGATTGAAGACTGCTGATTGGGAGCCAAAACAGATGTGTATCTGGTGGTTATGCTaGGAATTGCACCTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: SRIIDRLKTADWEPKQMCIWWLC*ELHLPQ
Trigger: TTGGGGCAGGTGCAATTCCAAGCATAACCACCAGAT...ACACATCTGTTTTGGCTCCCAATCAGCAGTCTTCAATCGATCAATAATTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp ACCATTTCTAGCATGTTCTATCAGAGGCACCTCCTTCTGTTATGGCCATGTCAAAGAACTGTTTTATTCTaGGAAGCAGGTATGCGCGGT +
Preference number: 5 (lower is better)
Translates to: TISSMFYQRHLLLLWPCQRTVLF*EAGMRG
Trigger: ACCGCGCATACCTGCTTCCAAGAATAAAACAGTTCT...TTGACATGGCCATAACAGAAGGAGGTGCCTCTGATAGAACATGCTAGAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS-3UTR CAA 90 bp CAAATTTCACTTACTTCCAAGTTTTCCCTAAGGCTGGCTGTGGTTGCTTTTCTTAGTTATGTGGGGGTGTaGGTTGTACAATACTCTAGG +
Preference number: 5 (lower is better)
Translates to: QISLTSKFSLRLAVVAFLSYVGV*VVQYSR
Trigger: CCTAGAGTATTGTACAACCAACACCCCCACATAACT...AAGAAAAGCAACCACAGCCAGCCTTAGGGAAAACTTGGAAGTAAGTGAAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp GTCCCCCTGCCGCGAACGGCCTGCACGCGGCGCGCCTaGTCCTGCTCGGCGGCCGAGCCGCTGTTCCGCAGC +
Preference number: 6 (lower is better)
Translates to: VPLPRTACTRRA*SCSAAEPLFRS
Trigger: GCTGCGGAACAGCGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTTCGCGGCAGGGGGAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp CTGCCGCGAACGGCCTGCACGCGGCGCGCCTGCTCCTaGTCGGCGGCCGAGCCGCTGTTCCGCAGCACCCGT +
Preference number: 6 (lower is better)
Translates to: LPRTACTRRACS*SAAEPLFRSTR
Trigger: ACGGGTGCTGCGGAACAGCGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTTCGCGGCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 72 bp GGGCGAACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTaGTGGTGCCACGCGCGCCCATCCCAGGCGCAGAGT +
Preference number: 6 (lower is better)
Translates to: GRTRSRKPPAAP*WCHARPSQAQS
Trigger: ACTCTGCGCCTGGGATGGGCGCGCGTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTTCGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 72 bp TCCGCTTCGCCCTTGCGCAGCTCCCGCACTCGCACCTaGACCAGGGCCGAGCCTGCCACGCCCCCGGGACGC +
Preference number: 6 (lower is better)
Translates to: SASPLRSSRTRT*TRAEPATPPGR
Trigger: GCGTCCCGGGGGCGTGGCAGGCTCGGCCCTGGTCCAGGTGCGAGTGCGGGAGCTGCGCAAGGGCGAAGCGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 72 bp GTCGCCGGTGCCATTCTCCCCCGAGTTGAGGGTCGGTaGGGGCACCGGTGCGGCGGTGGCCGGCGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: VAGAILPRVEGR*GHRCGGGRRSW
Trigger: CCAGGACCGCCGGCCACCGCCGCACCGGTGCCCTCACCGACCCTCAACTCGGGGGAGAATGGCACCGGCGAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 72 bp GTGGTGGTGCCACGCGCGCCCATCCCAGGCGCAGAGTaGAAAGAGCTTCCCGCCACCGCCCGCGCCGCCCCG +
Preference number: 6 (lower is better)
Translates to: VVVPRAPIPGAE*KELPATARAAP
Trigger: CGGGGCGGCGCGGGCGGTGGCGGGAAGCTCTTTTCACTCTGCGCCTGGGATGGGCGCGCGTGGCACCACCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 72 bp CGAACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTGGTaGTGCCACGCGCGCCCATCCCAGGCGCAGAGTGAA +
Preference number: 6 (lower is better)
Translates to: RTRSRKPPAAPW*CHARPSQAQSE
Trigger: TTCACTCTGCGCCTGGGATGGGCGCGCGTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTTCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 72 bp CGCGGAGCCCAGTCGCCGGTGCCATTCTCCCCCGAGTaGAGGGTCGGTGAGGGCACCGGTGCGGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: RGAQSPVPFSPE*RVGEGTGAAVA
Trigger: GGCCACCGCCGCACCGGTGCCCTCACCGACCCTCAACTCGGGGGAGAATGGCACCGGCGACTGGGCTCCGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp GCAGGAGGAAGCTGGTGCCTTCGGCGGCGCGCAGGGTaGCCCCCTCCAGGGACACGCGGCCTCCAGCAGTGT +
Preference number: 6 (lower is better)
Translates to: AGGSWCLRRRAG*PPPGTRGLQQC
Trigger: ACACTGCTGGAGGCCGCGTGTCCCTGGAGGGGGGCACCCTGCGCGCCGCCGAAGGCACCAGCTTCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp ACGCGCAGCAGGAAGCCGCCGGCGGCGCCGTGGTGGTaGCACGCGCGCCCATCCCAGGCGCAGAGTGAAAAG +
Preference number: 6 (lower is better)
Translates to: TRSRKPPAAPWW*HARPSQAQSEK
Trigger: CTTTTCACTCTGCGCCTGGGATGGGCGCGCGTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 72 bp GCTCCGGCTTGGCCCAGGAGTAGGGTGCAGAGCAGATaGGTCCCCCTGCCGCGAACGGCCTGCACGCGGCGC +
Preference number: 6 (lower is better)
Translates to: APAWPRSRVQSR*VPLPRTACTRR
Trigger: GCGCCGCGTGCAGGCCGTTCGCGGCAGGGGGACCCATCTGCTCTGCACCCTACTCCTGGGCCAAGCCGGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 90 bp AACACGAGCCGCGGAGCCCAGTCGCCGGTGCCATTCTCCCCCGAGTaGAGGGTCGGTGAGGGCACCGGTGCGGCGGTGGCCGGCGGTCCT +
Preference number: 6 (lower is better)
Translates to: NTSRGAQSPVPFSPE*RVGEGTGAAVAGGP
Trigger: AGGACCGCCGGCCACCGCCGCACCGGTGCCCTCACCGACCCTCAACTCGGGGGAGAATGGCACCGGCGACTGGGCTCCGCGGCTCGTGTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 72 bp CCGGGTCCAGCGACAGCAGGCTCAGGCGCAGGCCGCTaGACAGGGCCGACAAGGCTAGCAGCAGGAGCGCCC +
Preference number: 6 (lower is better)
Translates to: PGPATAGSGAGR*TGPTRLAAGAP
Trigger: GGGCGCTCCTGCTGCTAGCCTTGTCGGCCCTGTTCAGCGGCCTGCGCCTGAGCCTGCTGTCGCTGGACCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp CCCGGGACGCAAGGGCCCCAGGACTTCCACGTCCGATaGCCAGTCGCTCTGCTCCCTGCAGCGCTGCGGTCC +
Preference number: 6 (lower is better)
Translates to: PGTQGPQDFHVR*PVALLPAALRS
Trigger: GGACCGCAGCGCTGCAGGGAGCAGAGCGACTGGGCATCGGACGTGGAAGTCCTGGGGCCCTTGCGTCCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp CAGGCGGCCCAGCGGGTAGCACACGGGGAAGGCGGCTaGCATCAGAAGCCGGGTCAGGCACACGCTGTGCGA +
Preference number: 6 (lower is better)
Translates to: QAAQRVAHGEGG*HQKPGQAHAVR
Trigger: TCGCACAGCGTGTGCCTGACCCGGCTTCTGATGGCAGCCGCCTTCCCCGTGTGCTACCCGCTGGGCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 72 bp GGCAGCGAGGTGTACAGCCAGCCAGCCAGGGCCGCGTaGGCTCCGGCTTGGCCCAGGAGTAGGGTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: GSEVYSQPARAA*APAWPRSRVQS
Trigger: GCTCTGCACCCTACTCCTGGGCCAAGCCGGAGCCAACGCGGCCCTGGCTGGCTGGCTGTACACCTCGCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 90 bp AAGCCCGGCGGCAGCGAGGTGTACAGCCAGCCAGCCAGGGCCGCGTaGGCTCCGGCTTGGCCCAGGAGTAGGGTGCAGAGCAGATGGGTC +
Preference number: 6 (lower is better)
Translates to: KPGGSEVYSQPARAA*APAWPRSRVQSRWV
Trigger: GACCCATCTGCTCTGCACCCTACTCCTGGGCCAAGCCGGAGCCAACGCGGCCCTGGCTGGCTGGCTGTACACCTCGCTGCCGCCGGGCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp AGGGGCAGATTTCGGCGCCCAGGAATACCGCGCCGGTaGACACGAGCGCCGGCAGCCACGGGAAGTGGATCC +
Preference number: 6 (lower is better)
Translates to: RGRFRRPGIPRR*TRAPAATGSGS
Trigger: GGATCCACTTCCCGTGGCTGCCGGCGCTCGTGTGCACCGGCGCGGTATTCCTGGGCGCCGAAATCTGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 72 bp GCAGCGAGGTGTACAGCCAGCCAGCCAGGGCCGCGTTaGCTCCGGCTTGGCCCAGGAGTAGGGTGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: AARCTASQPGPR*LRLGPGVGCRA
Trigger: TGCTCTGCACCCTACTCCTGGGCCAAGCCGGAGCCAACGCGGCCCTGGCTGGCTGGCTGTACACCTCGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 72 bp TCAGAAGCCGGGTCAGGCACACGCTGTGCGAGGCGATaGCCAGCCCGTGCCGCGAACACACTGAGTAGGGGC +
Preference number: 6 (lower is better)
Translates to: SEAGSGTRCARR*PARAANTLSRG
Trigger: GCCCCTACTCAGTGTGTTCGCGGCACGGGCTGGCCATCGCCTCGCACAGCGTGTGCCTGACCCGGCTTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 72 bp GTGCGAGGCGATGGCCAGCCCGTGCCGCGAACACACTaGGTAGGGGCAGATTTCGGCGCCCAGGAATACCGC +
Preference number: 6 (lower is better)
Translates to: VRGDGQPVPRTH*VGADFGAQEYR
Trigger: GCGGTATTCCTGGGCGCCGAAATCTGCCCCTACTCAGTGTGTTCGCGGCACGGGCTGGCCATCGCCTCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CCA 72 bp AGGCCAGCTCCTCCATCCTCAGGTACACTACCTCGCTaGGGCTTCTCAGCCCGTCTGAGCGGCTGCACGGCA +
Preference number: 6 (lower is better)
Translates to: RPAPPSSGTLPR*GFSARLSGCTA
Trigger: TGCCGTGCAGCCGCTCAGACGGGCTGAGAAGCCCCAGCGAGGTAGTGTACCTGAGGATGGAGGAGCTGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 72 bp CCGTCTGAGCGGCTGCACGGCAGGCTGTTCCTGTTGTaGAGGAGCGTGATGGCGGGGTCATCCTTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: PSERLHGRLFLL*RSVMAGSSLGV
Trigger: GACCCCTAAGGATGACCCCGCCATCACGCTCCTCAACAACAGGAACAGCCTGCCGTGCAGCCGCTCAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 72 bp CCCGTCTGTGAAGGCCTCCATGTCAGGGGACTGAGGTaGGCTGTCCATGTGGCAGGCAGTGAGTGCGTTCTG +
Preference number: 6 (lower is better)
Translates to: PVCEGLHVRGLR*AVHVAGSECVL
Trigger: CAGAACGCACTCACTGCCTGCCACATGGACAGCTCACCTCAGTCCCCTGACATGGAGGCCTTCACAGACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp CAATGTTGTGCCGCTGGTCACCCTCGTACACTGGGATaGGAGTGTAGCCGCTGCGCAGGATCTCGGAGACAG +
Preference number: 6 (lower is better)
Translates to: QCCAAGHPRTLG*ECSRCAGSRRQ
Trigger: CTGTCTCCGAGATCCTGCGCAGCGGCTACACTCGCATCCCAGTGTACGAGGGTGACCAGCGGCACAACATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp GCTCTCGGTTTGGAGACTCAGAGCGATTCAACCCACTaGAGCGAGAAGGGGACCGGTTTACTGGGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: ALGLETQSDSTH*SEKGTGLLGSL
Trigger: CAGGCTCCCCAGTAAACCGGTCCCCTTCTCGCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488090.1
CDS CCA 72 bp TCTTCTTGTCCCGCTCAGCCAGCCAACACTGCCCACTaGGAGGGAGAGGATAACCTTCCTGGGGGAGTTACC +
Preference number: 6 (lower is better)
Translates to: SSCPAQPANTAH*EGEDNLPGGVT
Trigger: GGTAACTCCCCCAGGAAGGTTATCCTCTCCCTCCCAGTGGGCAGTGTTGGCTGGCTGAGCGGGACAAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488090.1
CDS CAA 72 bp GGGTGTTGCTGCCCCCAAAGTCACTGCGCTCTCGGTTaGGAGACTCAGAGCGATTCAACCCACTGCAGCGAG +
Preference number: 6 (lower is better)
Translates to: GCCCPQSHCALG*ETQSDSTHCSE
Trigger: CTCGCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS CAA 90 bp TGTACAGCTGGGTGTTGCTGCCCCCAAAGTCACTGCGCTCTCGGTTaGGAGACTCAGAGCGATTCAACCCACTGCAGCGAGAAGGGGACC +
Preference number: 6 (lower is better)
Translates to: CTAGCCCPQSHCALG*ETQSDSTHCSEKGT
Trigger: GGTCCCCTTCTCGCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACCCAGCTGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS CCA 72 bp GGTGTTGCTGCCCCCAAAGTCACTGCGCTCTCGGTTTaGAGACTCAGAGCGATTCAACCCACTGCAGCGAGA +
Preference number: 6 (lower is better)
Translates to: GVAAPKVTALSV*RLRAIQPTAAR
Trigger: TCTCGCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS GCA 72 bp TGCTGTACAGCTGGGTGTTGCTGCCCCCAAAGTCACTaGGCTCTCGGTTTGGAGACTCAGAGCGATTCAACC +
Preference number: 6 (lower is better)
Translates to: CCTAGCCCPQSH*ALGLETQSDST
Trigger: GGTTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACCCAGCTGTACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS GCA 72 bp AGAGGTTGTTGCTGCTGCTGTACAGCTGGGTGTTGCTaGCCCCAAAGTCACTGCGCTCTCGGTTTGGAGACT +
Preference number: 6 (lower is better)
Translates to: RGCCCCCTAGCC*PQSHCALGLET
Trigger: AGTCTCCAAACCGAGAGCGCAGTGACTTTGGGGGCAGCAACACCCAGCTGTACAGCAGCAGCAACAACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS GCA 72 bp ACGGCTGCAGGAGACAGCGTGAGCTGCTGTGTGCTGTaGTCCTCGAAGTCAGTCATTTCTTCCTGGGTGAAG +
Preference number: 6 (lower is better)
Translates to: TAAGDSVSCCVL*SSKSVISSWVK
Trigger: CTTCACCCAGGAAGAAATGACTGACTTCGAGGAGCACAGCACACAGCAGCTCACGCTGTCTCCTGCAGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp ATCTCCGTGTCCGAAAGCTTAAACAAGGAGAAGTCATaGCGCTTCCGCTCCCGTTGCGGGACCCTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: ISVSESLNKEKS*RFRSRCGTLCF
Trigger: AAAGCAGAGGGTCCCGCAACGGGAGCGGAAGCGGCATGACTTCTCCTTGTTTAAGCTTTCGGACACGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp GGACTGAGTAGTCAGGCATGTAGAGGTTGTTGCTGCTaGTGTACAGCTGGGTGTTGCTGCCCCCAAAGTCAC +
Preference number: 6 (lower is better)
Translates to: GLSSQACRGCCC*CTAGCCCPQSH
Trigger: GTGACTTTGGGGGCAGCAACACCCAGCTGTACAGCAGCAGCAACAACCTCTACATGCCTGACTACTCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS GCA 72 bp GGATGTGGACTGAGTAGTCAGGCATGTAGAGGTTGTTaGTGCTGCTGTACAGCTGGGTGTTGCTGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: GCGLSSQACRGC*CCCTAGCCCPQ
Trigger: TTGGGGGCAGCAACACCCAGCTGTACAGCAGCAGCAACAACCTCTACATGCCTGACTACTCAGTCCACATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS TCA 72 bp TGCTGTGCTCCTCGAAGTCAGTCATTTCTTCCTGGGTaGAGGCCAGCTCCTCCATCCTCAGGTACACTACCT +
Preference number: 6 (lower is better)
Translates to: CCAPRSQSFLPG*RPAPPSSGTLP
Trigger: AGGTAGTGTACCTGAGGATGGAGGAGCTGGCCTTCACCCAGGAAGAAATGACTGACTTCGAGGAGCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp GCTCTCGGTTTGGAGACTCAGAGCGATTCAACCCACTaGAGCGAGAAGGGGACCGGTTTAGAAAGACAGAAG +
Preference number: 6 (lower is better)
Translates to: ALGLETQSDSTH*SEKGTGLERQK
Trigger: CTTCTGTCTTTCTAAACCGGTCCCCTTCTCGCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS GCA 72 bp TGTGGACTGAGTAGTCAGGCATGTAGAGGTTGTTGCTaGTGCTGTACAGCTGGGTGTTGCTGCCCCCAAAGT +
Preference number: 6 (lower is better)
Translates to: CGLSSQACRGCC*CCTAGCCCPQS
Trigger: ACTTTGGGGGCAGCAACACCCAGCTGTACAGCAGCAGCAACAACCTCTACATGCCTGACTACTCAGTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356713.5
ENST00000488090.1
CDS CAA 72 bp CTTAAACAAGGAGAAGTCATGCCGCTTCCGCTCCCGTaGCGGGACCCTCTGCTTTTTCCGATTGTCAGTGTA +
Preference number: 6 (lower is better)
Translates to: LKQGEVMPLPLP*RDPLLFPIVSV
Trigger: TACACTGACAATCGGAAAAAGCAGAGGGTCCCGCAACGGGAGCGGAAGCGGCATGACTTCTCCTTGTTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 90 bp GTCCGAAAGCTTAAACAAGGAGAAGTCATGCCGCTTCCGCTCCCGTaGCGGGACCCTCTGCTTTTTCCGATTGTCAGTGTAGAGATCAGT +
Preference number: 6 (lower is better)
Translates to: VRKLKQGEVMPLPLP*RDPLLFPIVSVEIS
Trigger: ACTGATCTCTACACTGACAATCGGAAAAAGCAGAGGGTCCCGCAACGGGAGCGGAAGCGGCATGACTTCTCCTTGTTTAAGCTTTCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 72 bp TTCCTGGGGGAGTTACCTTCACAAACTGCACATCGCTaGGGATGTGGACTGAGTAGTCAGGCATGTAGAGGT +
Preference number: 6 (lower is better)
Translates to: FLGELPSQTAHR*GCGLSSQACRG
Trigger: ACCTCTACATGCCTGACTACTCAGTCCACATCCTCAGCGATGTGCAGTTTGTGAAGGTAACTCCCCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488090.1
CDS TCA 72 bp GATCTTCACAAACTGCACATCGCTGAGGATGTGGACTaGGTAGTCAGGCATGTAGAGGTTGTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: DLHKLHIAEDVD*VVRHVEVVAAA
Trigger: AGCAGCAGCAACAACCTCTACATGCCTGACTACTCAGTCCACATCCTCAGCGATGTGCAGTTTGTGAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS TCA 72 bp TACCTTCACAAACTGCACATCGCTGAGGATGTGGACTaGGTAGTCAGGCATGTAGAGGTTGTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: YLHKLHIAEDVD*VVRHVEVVAAA
Trigger: AGCAGCAGCAACAACCTCTACATGCCTGACTACTCAGTCCACATCCTCAGCGATGTGCAGTTTGTGAAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488090.1
CDS TCA 72 bp AATCGCTACTGCAGGGGCTGGTCTCTGTATCCAGGTTaGTGTTACAACATTCACTATCTGATGCTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: NRYCRGWSLYPG*CYNIHYLMLLS
Trigger: CGAGAGCAGCATCAGATAGTGAATGTTGTAACATCAACCTGGATACAGAGACCAGCCCCTGCAGTAGCGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 72 bp TTGCCCTGTCATGTGATCAGAGGTGTTAAATTGGAGTaGTCCTCAGAGGTTCTCTCTCCTTCTGGTGACCTC +
Preference number: 6 (lower is better)
Translates to: LPCHVIRGVKLE*SSEVLSPSGDL
Trigger: GAGGTCACCAGAAGGAGAGAGAACCTCTGAGGACAACTCCAATTTAACACCTCTGATCACATGACAGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 72 bp CTGGCTTTGCCCTGTCATGTGATCAGAGGTGTTAAATaGGAGTTGTCCTCAGAGGTTCTCTCTCCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: LALPCHVIRGVK*ELSSEVLSPSG
Trigger: ACCAGAAGGAGAGAGAACCTCTGAGGACAACTCCAATTTAACACCTCTGATCACATGACAGGGCAAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356713.5
CDS CAA 72 bp AAATCGCTACTGCAGGGGCTGGTCTCTGTATCCAGGTaGATGTTACAACATTCACTATCTGATGCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: KSLLQGLVSVSR*MLQHSLSDAAL
Trigger: GAGAGCAGCATCAGATAGTGAATGTTGTAACATCAACCTGGATACAGAGACCAGCCCCTGCAGTAGCGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356713.5