Pregenerated sensors for CNN3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000235501Ensembl transcript IDs: ENST00000438509.2, ENST00000452846.5, ENST00000456582.2, ENST00000657603.1, ENST00000659935.1, ENST00000659966.1, ENST00000664573.1, ENST00000664672.1, ENST00000666627.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTGGAGGCCCCAGTTCCTCCGGCCCAGAGGCTCCAACGCTGCTATTaGTGTTCCAGCAGCGGGCGGAGGGGTCCTGCCCGGCATCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VEAPVPPAQRLQRCY*CSSSGRRGPARHLG Trigger: GCCCAGATGCCGGGCAGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAGCGTTGGAGCCTCTGGGCCGGAGGAACTGGGGCCTCCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS GCA 90 bp | GTGTCGGTGGAGGCCCCAGTTCCTCCGGCCCAGAGGCTCCAACGCTaGTATTGGTGTTCCAGCAGCGGGCGGAGGGGTCCTGCCCGGCAT | + |
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Preference number: 5 (lower is better) Translates to: VSVEAPVPPAQRLQR*YWCSSSGRRGPARH Trigger: ATGCCGGGCAGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAGCGTTGGAGCCTCTGGGCCGGAGGAACTGGGGCCTCCACCGACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS GCA 90 bp | GGCACTATAGCAGAATGGTTTAATACCTGGACCCTGGGGTCAGGCTaGCTGGGTTCAAATTCTGTCTTGCTTTTTACCTGGGCAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: GTIAEWFNTWTLGSG*LGSNSVLLFTWAGH Trigger: GTGGCCTGCCCAGGTAAAAAGCAAGACAGAATTTGAACCCAGGCAGCCTGACCCCAGGGTCCAGGTATTAAACCATTCTGCTATAGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666627.1 |
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| CDS GCA 90 bp | GATCCTGAGTGCGGGCTGTGTCGACATCACGTCATTAATGTCTTCTaGTCCCTGCACTGTGGTCAAAGGCTTTTCAACGTAGCCTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: DPECGLCRHHVINVF*SLHCGQRLFNVALD Trigger: ATCCAAGGCTACGTTGAAAAGCCTTTGACCACAGTGCAGGGAGCAGAAGACATTAATGACGTGATGTCGACACAGCCCGCACTCAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000438509.2 ENST00000452846.5 ENST00000456582.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 90 bp | CAAAGAGGCCCCGGGATTCAAAAACACAAGCAGAGCTACACCACGTaGGGTTTGGGACGAGCTGAATTCCGGATAAAGATGCCTGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: QRGPGIQKHKQSYTT*GLGRAEFRIKMPVK Trigger: CTTTACAGGCATCTTTATCCGGAATTCAGCTCGTCCCAAACCCCACGTGGTGTAGCTCTGCTTGTGTTTTTGAATCCCGGGGCCTCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 90 bp | CTGGGGTCAGGCTGCCTGGGTTCAAATTCTGTCTTGCTTTTTACCTaGGCAGGCCACTGCACTTCACTGTGCCTCAGTTGTTTCATTTGT | + |
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Preference number: 5 (lower is better) Translates to: LGSGCLGSNSVLLFT*AGHCTSLCLSCFIC Trigger: ACAAATGAAACAACTGAGGCACAGTGAAGTGCAGTGGCCTGCCCAGGTAAAAAGCAAGACAGAATTTGAACCCAGGCAGCCTGACCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666627.1 |
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| CDS TCA 90 bp | AAGAAAGAATTCAGGGCGAGTTTCTATTCCAGGACGGTTCAACTATaGTGTTTTGGCTCCTCTTCTCAAGCAGGTGTCGGTGGAGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: KKEFRASFYSRTVQL*CFGSSSQAGVGGGP Trigger: GGGGCCTCCACCGACACCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAAACTCGCCCTGAATTCTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452846.5 |
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| CDS CCA 90 bp | GGGAGTTGGTCTTGCTTTGTGGTTCTCTTTAATTCTCTGGCATTGTaGACTTGTTACAGGAACAGGGTCCCGATCCAACCCCAAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GSWSCFVVLFNSLAL*TCYRNRVPIQPQER Trigger: CCTCTCTTGGGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCAAGACCAACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664672.1 |
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| CDS CCA 90 bp | GGAAGAAGGGGAGTTGGTCTTGCTTTGTGGTTCTCTTTAATTCTCTaGCATTGTGGACTTGTTACAGGAACAGGGTCCCGATCCAACCCC | + |
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Preference number: 5 (lower is better) Translates to: GRRGVGLALWFSLIL*HCGLVTGTGSRSNP Trigger: GGGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCAAGACCAACTCCCCTTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664672.1 |
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| CDS CCA 90 bp | GCAGCTTTCCACACCTGGTTCCATGATCTCTTCTGGCACAGTAGCTaGTATTTGGCAAACATAGGTTTCATCCTGGGATCTCAGGGATTG | + |
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Preference number: 5 (lower is better) Translates to: AAFHTWFHDLFWHSS*YLANIGFILGSQGL Trigger: CAATCCCTGAGATCCCAGGATGAAACCTATGTTTGCCAAATACCAGCTACTGTGCCAGAAGAGATCATGGAACCAGGTGTGGAAAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS TCA 90 bp | TCAAAAACACAAGCAGAGCTACACCACGTGGGGTTTGGGACGAGCTaGATTCCGGATAAAGATGCCTGTAAAGAGGAGTTGATGCGAATC | + |
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Preference number: 5 (lower is better) Translates to: SKTQAELHHVGFGTS*IPDKDACKEELMRI Trigger: GATTCGCATCAACTCCTCTTTACAGGCATCTTTATCCGGAATTCAGCTCGTCCCAAACCCCACGTGGTGTAGCTCTGCTTGTGTTTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS GCA 90 bp | GCTTTTCAACGTAGCCTTGGATCCCCTGGGTTTGCTGCAGTTCAGTaGACCTCAAAGCACGATAACAGGAACTTTGTGGTTCTCTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: AFQRSLGSPGFAAVQ*TSKHDNRNFVVLFN Trigger: ATTAAAGAGAACCACAAAGTTCCTGTTATCGTGCTTTGAGGTGCACTGAACTGCAGCAAACCCAGGGGATCCAAGGCTACGTTGAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666627.1 |
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| CDS CCA 90 bp | TTTTTGAGGTTCAGCTTTGTGGTTCTCTTTAATTCTCTGGCATTGTaGACTTGTTACAGGAACAGGGTCCCGATCCAACCCCAAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: FLRFSFVVLFNSLAL*TCYRNRVPIQPQER Trigger: CCTCTCTTGGGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCTGAACCTCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000438509.2 ENST00000456582.2 ENST00000659935.1 ENST00000664573.1 |
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| CDS TCA 90 bp | CTTGGATTTCACACAAGAAAGAATTCAGGGCGAGTCAACTGTTGGTaGGGAAGCAGAGGAACTGGAACTCTCATACGCATTCTATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LGFHTRKNSGRVNCW*GSRGTGTLIRILFQ Trigger: CTGGAATAGAATGCGTATGAGAGTTCCAGTTCCTCTGCTTCCTCACCAACAGTTGACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS GCA 90 bp | TGCCTGGGTTCAAATTCTGTCTTGCTTTTTACCTGGGCAGGCCACTaGACTTCACTGTGCCTCAGTTGTTTCATTTGTAAGGTTAGGATT | + |
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Preference number: 5 (lower is better) Translates to: CLGSNSVLLFTWAGH*TSLCLSCFICKVRI Trigger: AATCCTAACCTTACAAATGAAACAACTGAGGCACAGTGAAGTGCAGTGGCCTGCCCAGGTAAAAAGCAAGACAGAATTTGAACCCAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666627.1 |
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| CDS CCA 90 bp | AAAGAATTCAGGGCGAGTCAACTGTTGGTGAGGAAGCAGAGGAACTaGAACTCTCATACGCATTCTATTCCAGGACGGTTCAACTATGAT | + |
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Preference number: 5 (lower is better) Translates to: KEFRASQLLVRKQRN*NSHTHSIPGRFNYD Trigger: ATCATAGTTGAACCGTCCTGGAATAGAATGCGTATGAGAGTTCCAGTTCCTCTGCTTCCTCACCAACAGTTGACTCGCCCTGAATTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS TCA 90 bp | GCTGATTCTGGCCTAAAGGATACTTATCTCTATACAAAGGGCTTCTaGTTCAAAGAGGCCCCGGGATTCAAAAACACAAGCAGAGCTACA | + |
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Preference number: 5 (lower is better) Translates to: ADSGLKDTYLYTKGF*FKEAPGFKNTSRAT Trigger: TGTAGCTCTGCTTGTGTTTTTGAATCCCGGGGCCTCTTTGAATCAGAAGCCCTTTGTATAGAGATAAGTATCCTTTAGGCCAGAATCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 90 bp | AAGGTCTTCATCTTCATCATCTTCACATTGAGTAGGTTGGGAAGGTaGAAGAAGGGGAGTTGGTCTTGCTTTGTGGTTCTCTTTAATTCT | + |
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Preference number: 5 (lower is better) Translates to: KVFIFIIFTLSRLGR*KKGSWSCFVVLFNS Trigger: AGAATTAAAGAGAACCACAAAGCAAGACCAACTCCCCTTCTTCCACCTTCCCAACCTACTCAATGTGAAGATGATGAAGATGAAGACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664672.1 |
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| CDS TCA 90 bp | ATTCTTAAGTCTCAAAGTTTCAGCTTTCTCACCCCTCAACGGACATaGAATCTACCTATTTGTAACTCCAGGGAAGTAAATGAGATAATG | + |
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Preference number: 5 (lower is better) Translates to: ILKSQSFSFLTPQRT*NLPICNSREVNEIM Trigger: CATTATCTCATTTACTTCCCTGGAGTTACAAATAGGTAGATTTCATGTCCGTTGAGGGGTGAGAAAGCTGAAACTTTGAGACTTAAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS TCA 72 bp | GCCCGGTCCGGCCCGCCGCGGAGGATGCCTGGAGGTTaGCGTGAATGGCCTGTGGCTGGGAAGCCCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ARSGPPRRMPGG*REWPVAGKPPG Trigger: GCCTGGGGGCTTCCCAGCCACAGGCCATTCACGTCAACCTCCAGGCATCCTCCGCGGCGGGCCGGACCGGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000438509.2 ENST00000659966.1 |
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| CDS GCA 72 bp | CTGCTATTGGTGTTCCAGCAGCGGGCGGAGGGGTCCTaGCCGGCATCTGGGCGCGCTGGGCCCAGAGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: LLLVFQQRAEGS*PASGRAGPRAR Trigger: CCGGGCTCTGGGCCCAGCGCGCCCAGATGCCGGGCAGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS TCA 72 bp | GTCCGGCCCGCCGCGGAGGATGCCTGGAGGTTGACGTaGATGGCCTGTGGCTGGGAAGCCCCCAGGCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: VRPAAEDAWRLT*MACGWEAPRRP Trigger: AGGGCGCCTGGGGGCTTCCCAGCCACAGGCCATTCACGTCAACCTCCAGGCATCCTCCGCGGCGGGCCGGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659966.1 |
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| CDS CAA 90 bp | GGTGGAGGCCCCAGTTCCTCCGGCCCAGAGGCTCCAACGCTGCTATaGGTGTTCCAGCAGCGGGCGGAGGGGTCCTGCCCGGCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGGPSSSGPEAPTLL*VFQQRAEGSCPASG Trigger: CCCAGATGCCGGGCAGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAGCGTTGGAGCCTCTGGGCCGGAGGAACTGGGGCCTCCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | CCAGTTCCTCCGGCCCAGAGGCTCCAACGCTGCTATTaGTGTTCCAGCAGCGGGCGGAGGGGTCCTGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PVPPAQRLQRCY*CSSSGRRGPAR Trigger: CCGGGCAGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAGCGTTGGAGCCTCTGGGCCGGAGGAACTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CAA 72 bp | CCCAGTTCCTCCGGCCCAGAGGCTCCAACGCTGCTATaGGTGTTCCAGCAGCGGGCGGAGGGGTCCTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PSSSGPEAPTLL*VFQQRAEGSCP Trigger: CGGGCAGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAGCGTTGGAGCCTCTGGGCCGGAGGAACTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS GCA 72 bp | GAGGCCCCAGTTCCTCCGGCCCAGAGGCTCCAACGCTaGTATTGGTGTTCCAGCAGCGGGCGGAGGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: EAPVPPAQRLQR*YWCSSSGRRGP Trigger: AGGACCCCTCCGCCCGCTGCTGGAACACCAATAGCAGCGTTGGAGCCTCTGGGCCGGAGGAACTGGGGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CAA 90 bp | GTCTTCTGCTCCCTGCACTGTGGTCAAAGGCTTTTCAACGTAGCCTaGGATCCCCTGGGTTTGCTGCAGTTCAGTGCACCTCAAAGCACG | + |
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Preference number: 6 (lower is better) Translates to: VFCSLHCGQRLFNVA*DPLGLLQFSAPQST Trigger: CGTGCTTTGAGGTGCACTGAACTGCAGCAAACCCAGGGGATCCAAGGCTACGTTGAAAAGCCTTTGACCACAGTGCAGGGAGCAGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000438509.2 ENST00000452846.5 ENST00000456582.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | TACCATCGATCCGGGGTTATCTCTGTGTTCTTTTCCTaGAGGATCCTGAGTGCGGGCTGTGTCGACATCACG | + |
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Preference number: 6 (lower is better) Translates to: YHRSGVISVFFS*RILSAGCVDIT Trigger: CGTGATGTCGACACAGCCCGCACTCAGGATCCTCCAGGAAAAGAACACAGAGATAACCCCGGATCGATGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000438509.2 ENST00000452846.5 ENST00000456582.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000666627.1 |
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| CDS CCA 72 bp | TGTTGCCATGGCATTTGCAAACTGTCATGGCGCTGGTaGGAGTGTAGCAGTGAGGACGACCAGAGGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: CCHGICKLSWRW*ECSSEDDQRSF Trigger: GAATGACCTCTGGTCGTCCTCACTGCTACACTCCCACCAGCGCCATGACAGTTTGCAAATGCCATGGCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456582.2 |
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| CDS CAA 72 bp | TCCCTGCACTGTGGTCAAAGGCTTTTCAACGTAGCCTaGGATCCCCTGGGTTTGCTGCAGTTCAGTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: SLHCGQRLFNVA*DPLGLLQFSAP Trigger: AGGTGCACTGAACTGCAGCAAACCCAGGGGATCCAAGGCTACGTTGAAAAGCCTTTGACCACAGTGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000438509.2 ENST00000452846.5 ENST00000456582.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | GAACAGGGTCCCGATCCAACCCCAAGAGAGGGCTCTTaGATTTCACACAAGAAAGAATTCAGGGCGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: EQGPDPTPREGS*ISHKKEFRASL Trigger: CAGACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAGAGCCCTCTCTTGGGGTTGGATCGGGACCCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456582.2 |
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| CDS CAA 72 bp | GGAACAGGGTCCCGATCCAACCCCAAGAGAGGGCTCTaGGATTTCACACAAGAAAGAATTCAGGGCGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GTGSRSNPKRGL*DFTQERIQGES Trigger: AGACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAGAGCCCTCTCTTGGGGTTGGATCGGGACCCTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456582.2 |
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| CDS CAA 72 bp | GGAACAGGGTCCCGATCCAACCCCAAGAGAGGGCTCTaGGATTTCACACAAGAAAGAATTCAGGGCGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GTGSRSNPKRGL*DFTQERIQGES Trigger: TGACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAGAGCCCTCTCTTGGGGTTGGATCGGGACCCTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS TCA 72 bp | CAAGCAGAGCTACACCACGTGGGGTTTGGGACGAGCTaGATTCCGGATAAAGATGCCTGTAAAGAGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: QAELHHVGFGTS*IPDKDACKEEL Trigger: CAACTCCTCTTTACAGGCATCTTTATCCGGAATTCAGCTCGTCCCAAACCCCACGTGGTGTAGCTCTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | CCCGGGATTCAAAAACACAAGCAGAGCTACACCACGTaGGGTTTGGGACGAGCTGAATTCCGGATAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: PGIQKHKQSYTT*GLGRAEFRIKM Trigger: CATCTTTATCCGGAATTCAGCTCGTCCCAAACCCCACGTGGTGTAGCTCTGCTTGTGTTTTTGAATCCCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | GAACAGGGTCCCGATCCAACCCCAAGAGAGGGCTCTTaGATTTCACACAAGAAAGAATTCAGGGCGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: EQGPDPTPREGS*ISHKKEFRASF Trigger: GAAACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAGAGCCCTCTCTTGGGGTTGGATCGGGACCCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000452846.5 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | GAGTTTCTATTCCAGGACGGTTCAACTATGATGTTTTaGCTCCTCTTCTCAAGCAGGTGTCGGTGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: EFLFQDGSTMMF*LLFSSRCRWRP Trigger: GGGCCTCCACCGACACCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452846.5 |
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| CDS CCA 72 bp | GAACAGGGTCCCGATCCAACCCCAAGAGAGGGCTCTTaGATTTCACACAAGAAAGAATTCAGGGCGAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: EQGPDPTPREGS*ISHKKEFRASQ Trigger: TTGACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAGAGCCCTCTCTTGGGGTTGGATCGGGACCCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS CAA 72 bp | GGAACAGGGTCCCGATCCAACCCCAAGAGAGGGCTCTaGGATTTCACACAAGAAAGAATTCAGGGCGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: GTGSRSNPKRGL*DFTQERIQGEF Trigger: AAACTCGCCCTGAATTCTTTCTTGTGTGAAATCCAAGAGCCCTCTCTTGGGGTTGGATCGGGACCCTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000452846.5 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CAA 72 bp | CGAGTTTCTATTCCAGGACGGTTCAACTATGATGTTTaGGCTCCTCTTCTCAAGCAGGTGTCGGTGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RVSIPGRFNYDV*APLLKQVSVEA Trigger: GGCCTCCACCGACACCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAAACTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452846.5 |
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| CDS GCA 72 bp | GCAGAATGGTTTAATACCTGGACCCTGGGGTCAGGCTaGCTGGGTTCAAATTCTGTCTTGCTTTTTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: AEWFNTWTLGSG*LGSNSVLLFTW Trigger: CCAGGTAAAAAGCAAGACAGAATTTGAACCCAGGCAGCCTGACCCCAGGGTCCAGGTATTAAACCATTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666627.1 |
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| CDS CAA 90 bp | AAGGGGAGTTGGTCTTGCTTTGTGGTTCTCTTTAATTCTCTGGCATaGTGGACTTGTTACAGGAACAGGGTCCCGATCCAACCCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: KGSWSCFVVLFNSLA*WTCYRNRVPIQPQE Trigger: CTCTTGGGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCAAGACCAACTCCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664672.1 |
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| CDS GCA 72 bp | GGTTATCTCTGTGTTCTTTTCCTGGAGGATCCTGAGTaGGGGCTGTGTCGACATCACGTCATTAATGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GYLCVLFLEDPE*GLCRHHVINVF Trigger: GAAGACATTAATGACGTGATGTCGACACAGCCCGCACTCAGGATCCTCCAGGAAAAGAACACAGAGATAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000438509.2 ENST00000452846.5 ENST00000456582.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000666627.1 |
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| CDS CAA 90 bp | AATTCAGGGCGAGTTTCTATTCCAGGACGGTTCAACTATGATGTTTaGGCTCCTCTTCTCAAGCAGCTTTCCACACCTGGTTCCATGATC | + |
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Preference number: 6 (lower is better) Translates to: NSGRVSIPGRFNYDV*APLLKQLSTPGSMI Trigger: GATCATGGAACCAGGTGTGGAAAGCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAAACTCGCCCTGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS TCA 72 bp | CACACAAGAAAGAATTCAGGGCGAGTCAACTGTTGGTaGGGAAGCAGAGGAACTGGAACTCTCATACGCATT | + |
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Preference number: 6 (lower is better) Translates to: HTRKNSGRVNCW*GSRGTGTLIRI Trigger: AATGCGTATGAGAGTTCCAGTTCCTCTGCTTCCTCACCAACAGTTGACTCGCCCTGAATTCTTTCTTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS GCA 72 bp | AGAGGAGTTGATGCGAATCCAGAAAAGCACTTGAAATaGCCAGGCTTTGCATGGCACATTCCCCAGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: RGVDANPEKHLK*PGFAWHIPQDF Trigger: AAAATCCTGGGGAATGTGCCATGCAAAGCCTGGGCATTTCAAGTGCTTTTCTGGATTCGCATCAACTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | CACACCTGGTTCCATGATCTCTTCTGGCACAGTAGCTaGTATTTGGCAAACATAGGTTTCATCCTGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: HTWFHDLFWHSS*YLANIGFILGS Trigger: AGATCCCAGGATGAAACCTATGTTTGCCAAATACCAGCTACTGTGCCAGAAGAGATCATGGAACCAGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | TTCAGCTTTGTGGTTCTCTTTAATTCTCTGGCATTGTaGACTTGTTACAGGAACAGGGTCCCGATCCAACCC | + |
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Preference number: 6 (lower is better) Translates to: FSFVVLFNSLAL*TCYRNRVPIQP Trigger: GGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000438509.2 ENST00000456582.2 ENST00000659935.1 ENST00000664573.1 |
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| CDS CCA 72 bp | TTGCTCTTTGTGGTTCTCTTTAATTCTCTGGCATTGTaGACTTGTTACAGGAACAGGGTCCCGATCCAACCC | + |
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Preference number: 6 (lower is better) Translates to: LLFVVLFNSLAL*TCYRNRVPIQP Trigger: GGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657603.1 |
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| CDS CCA 72 bp | CGCATTCTATTCCAGGACGGTTCAACTATGATGTTTTaGCTCCTCTTCTCAAGCAGCTTTCCACACCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RILFQDGSTMMF*LLFSSSFPHLV Trigger: AACCAGGTGTGGAAAGCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS CCA 72 bp | TCTTGCTTTGTGGTTCTCTTTAATTCTCTGGCATTGTaGACTTGTTACAGGAACAGGGTCCCGATCCAACCC | + |
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Preference number: 6 (lower is better) Translates to: SCFVVLFNSLAL*TCYRNRVPIQP Trigger: GGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664672.1 |
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| CDS CCA 72 bp | TATCTTAGAGGCACTATAGCAGAATGGTTTAATACCTaGACCCTGGGGTCAGGCTGCCTGGGTTCAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: YLRGTIAEWFNT*TLGSGCLGSNS Trigger: AGAATTTGAACCCAGGCAGCCTGACCCCAGGGTCCAGGTATTAAACCATTCTGCTATAGTGCCTCTAAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666627.1 |
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| CDS CCA 72 bp | AAGTTTCTCTGTTATCTTAGAGGCACTATAGCAGAATaGTTTAATACCTGGACCCTGGGGTCAGGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: KFLCYLRGTIAE*FNTWTLGSGCL Trigger: CAGGCAGCCTGACCCCAGGGTCCAGGTATTAAACCATTCTGCTATAGTGCCTCTAAGATAACAGAGAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666627.1 |
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| CDS CAA 72 bp | ATTCAAAAACACAAGCAGAGCTACACCACGTGGGGTTaGGGACGAGCTGAATTCCGGATAAAGATGCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: IQKHKQSYTTWG*GRAEFRIKMPV Trigger: TACAGGCATCTTTATCCGGAATTCAGCTCGTCCCAAACCCCACGTGGTGTAGCTCTGCTTGTGTTTTTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CAA 72 bp | TGGTTCCATGATCTCTTCTGGCACAGTAGCTGGTATTaGGCAAACATAGGTTTCATCCTGGGATCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: WFHDLFWHSSWY*ANIGFILGSQG Trigger: TCCCTGAGATCCCAGGATGAAACCTATGTTTGCCAAATACCAGCTACTGTGCCAGAAGAGATCATGGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CAA 72 bp | CGAGTTTCTATTCCAGGACGGTTCAACTATGATGTTTaGGCTCCTCTTCTCAAGCAGCTTTCCACACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RVSIPGRFNYDV*APLLKQLSTPG Trigger: ACCAGGTGTGGAAAGCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAAACTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CAA 72 bp | ACGCATTCTATTCCAGGACGGTTCAACTATGATGTTTaGGCTCCTCTTCTCAAGCAGCTTTCCACACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: THSIPGRFNYDV*APLLKQLSTPG Trigger: ACCAGGTGTGGAAAGCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAATGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS CAA 90 bp | TTCCACACCTGGTTCCATGATCTCTTCTGGCACAGTAGCTGGTATTaGGCAAACATAGGTTTCATCCTGGGATCTCAGGGATTGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: FHTWFHDLFWHSSWY*ANIGFILGSQGLKS Trigger: AGATTTCAATCCCTGAGATCCCAGGATGAAACCTATGTTTGCCAAATACCAGCTACTGTGCCAGAAGAGATCATGGAACCAGGTGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CAA 90 bp | AACTTTTTGAGGTTCAGCTTTGTGGTTCTCTTTAATTCTCTGGCATaGTGGACTTGTTACAGGAACAGGGTCCCGATCCAACCCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: NFLRFSFVVLFNSLA*WTCYRNRVPIQPQE Trigger: CTCTTGGGGTTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCTGAACCTCAAAAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000438509.2 ENST00000456582.2 ENST00000659935.1 ENST00000664573.1 |
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| CDS CAA 90 bp | AACTCTCATACGCATTCTATTCCAGGACGGTTCAACTATGATGTTTaGGCTCCTCTTCTCAAGCAGCTTTCCACACCTGGTTCCATGATC | + |
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Preference number: 6 (lower is better) Translates to: NSHTHSIPGRFNYDV*APLLKQLSTPGSMI Trigger: GATCATGGAACCAGGTGTGGAAAGCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAATGCGTATGAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS CCA 72 bp | GAGTTTCTATTCCAGGACGGTTCAACTATGATGTTTTaGCTCCTCTTCTCAAGCAGCTTTCCACACCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: EFLFQDGSTMMF*LLFSSSFPHLV Trigger: AACCAGGTGTGGAAAGCTGCTTGAGAAGAGGAGCCAAAACATCATAGTTGAACCGTCCTGGAATAGAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664672.1 ENST00000666627.1 |
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| CDS CCA 72 bp | ATCTTCATCATCTTCACATTGAGTAGGTTGGGAAGGTaGAAGAAGGGGAGTTGGTCTTGCTTTGTGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: IFIIFTLSRLGR*KKGSWSCFVVL Trigger: GAGAACCACAAAGCAAGACCAACTCCCCTTCTTCCACCTTCCCAACCTACTCAATGTGAAGATGATGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664672.1 |
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| CDS CAA 72 bp | AGGTTCAGCTTTGTGGTTCTCTTTAATTCTCTGGCATaGTGGACTTGTTACAGGAACAGGGTCCCGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: RFSFVVLFNSLA*WTCYRNRVPIQ Trigger: TTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCTGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000438509.2 ENST00000456582.2 ENST00000659935.1 ENST00000664573.1 |
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| CDS CAA 72 bp | ATTTCACACAAGAAAGAATTCAGGGCGAGTCAACTGTaGGTGAGGAAGCAGAGGAACTGGAACTCTCATACG | + |
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Preference number: 6 (lower is better) Translates to: ISHKKEFRASQL*VRKQRNWNSHT Trigger: CGTATGAGAGTTCCAGTTCCTCTGCTTCCTCACCAACAGTTGACTCGCCCTGAATTCTTTCTTGTGTGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664573.1 |
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| CDS CAA 72 bp | TGGTCTTGCTTTGTGGTTCTCTTTAATTCTCTGGCATaGTGGACTTGTTACAGGAACAGGGTCCCGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: WSCFVVLFNSLA*WTCYRNRVPIQ Trigger: TTGGATCGGGACCCTGTTCCTGTAACAAGTCCACAATGCCAGAGAATTAAAGAGAACCACAAAGCAAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664672.1 |
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| CDS GCA 72 bp | TTGCTTTTTACCTGGGCAGGCCACTGCACTTCACTGTaGCTCAGTTGTTTCATTTGTAAGGTTAGGATTATA | + |
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Preference number: 6 (lower is better) Translates to: LLFTWAGHCTSL*LSCFICKVRII Trigger: TATAATCCTAACCTTACAAATGAAACAACTGAGGCACAGTGAAGTGCAGTGGCCTGCCCAGGTAAAAAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666627.1 |
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| CDS TCA 72 bp | TCTCAAAGTTTCAGCTTTCTCACCCCTCAACGGACATaGAATCTACCTATTTGTAACTCCAGGGAAGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: SQSFSFLTPQRT*NLPICNSREVN Trigger: ATTTACTTCCCTGGAGTTACAAATAGGTAGATTTCATGTCCGTTGAGGGGTGAGAAAGCTGAAACTTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000438509.2 ENST00000657603.1 ENST00000659935.1 ENST00000659966.1 ENST00000664573.1 ENST00000664672.1 ENST00000666627.1 |
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