Pregenerated sensors for CNN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000117519Ensembl transcript IDs: ENST00000370206.9, ENST00000394202.8, ENST00000415017.1, ENST00000474409.1, ENST00000545882.5
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTACTCAAGGCTAGCTTaGTTCTCACTGAATAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFYSRLA*FSLNKN Trigger: GTTTTTATTCAGTGAGAACCAAGCTAGCCTTGAGTA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGCCCCCGCCTCCGCCTaGGCCTTCGAGGATTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFAPASA*AFEDWP Trigger: CGGCCAATCCTCGAAGGCCCAGGCGGAGGCGGGGGC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394202.8 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGGCCGCCGCGGGGGATaGTCGAACTCCCTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFGRRGG*SNSLLW Trigger: CCAGAGGAGGGAGTTCGAGCATCCCCCGCGGCGGCC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTAGCCTCGAGCTCCGCTaGGAAGCACCCGGCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFSLELR*EAPGCL Trigger: GAGGCAGCCGGGTGCTTCGCAGCGGAGCTCGAGGCT...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394202.8 |
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| CDS-3UTR TCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGTGCGGTGGCAATCCTaGCATGCTTGGGCTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFVRWQS*HAWAPG Trigger: CCCGGGAGCCCAAGCATGTCAGGATTGCCACCGCAC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545882.5 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGGGAAGAGACAGCGCTaGGGTCCGGGGTCTCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFGKRQR*GPGSLA Trigger: TGCGAGAGACCCCGGACCCCAGCGCTGTCTCTTCCC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTGGGCCTTCGAGGATTaGCCGCCGGGCCCGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFWAFED*PPGPTN Trigger: ATTGGTCGGGCCCGGCGGCCAATCCTCGAAGGCCCA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394202.8 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCCAGCGGTCGGACGGTaGGGTGGCAATCCTGACATG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFPAVGR*GGNPDM Trigger: CATGTCAGGATTGCCACCGCACCGTCCGACCGCTGG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545882.5 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCGGTGCCTGGGCGACTaGGTCCAACTGGGTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFRCLGD*VQLGAT Trigger: TGTAGCACCCAGTTGGACCCAGTCGCCCAGGCACCG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCTGGGTCCAACTGGGTaGTACAGAGCCTCGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFLGPTG*YRASSS Trigger: GGAGCTCGAGGCTCTGTAGCACCCAGTTGGACCCAG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGCGACTGGGTCCAACTaGGTGCTACAGAGCCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFATGSN*VLQSLE Trigger: CTCGAGGCTCTGTAGCACCCAGTTGGACCCAGTCGC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGGGCCCTTGTTGAAGTaGGTCATGGTGGTTCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFGPLLK*VMVVRA Trigger: CGCCCGAACCACCATGACCCACTTCAACAAGGGCCC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGTGGCAATCCTGACATaGTTGGGCTCCCGGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFVAILT*LGSREV Trigger: AACCTCCCGGGAGCCCAAGCATGTCAGGATTGCCAC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545882.5 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTAGCCCAGCTGGAAGTTaGGGCCAATGCTCATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFSPAGS*GQCSCL Trigger: CAGGCATGAGCATTGGCCCCAACTTCCAGCTGGGCT...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR TCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTAGGAAGGGCCCTTGTTaGAGTGGGTCATGGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFRKGPC*SGSWWF Trigger: GAACCACCATGACCCACTTCAACAAGGGCCCTTCCT...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS-3UTR TCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGGGATGTTCCAGCTCTaGCAATGCCAGTGCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFGMFQL*QCQCLP Trigger: TGGAAGGCACTGGCATTGTCAGAGCTGGAACATCCC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545882.5 |
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| CDS-3UTR TCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTCAGTGAGGACTCGTTaGCCTTCTTCACTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFSVRTR*PSSLSL Trigger: CAGGCTCAGTGAAGAAGGTCAACGAGTCCTCACTGA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTGGGGCCAATGCTCATaGCTGTCACCTCTTCTATCC | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFWGQCS*LSPLLS Trigger: GGATAGAAGAGGTGACAGGCATGAGCATTGGCCCCA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR TCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCCAATATTCTCCAACTaGGGCCAGTTCAGTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFPIFSN*GQFSED Trigger: GTCCTCACTGAACTGGCCTCAGTTGGAGAATATTGG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000545882.5 |
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| CDS-3UTR TCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCCTTGGCTTCCGTTGTaGATGACAGGTTCTGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFPWLPL*MTGSVG Trigger: TCCTACAGAACCTGTCATTCACAACGGAAGCCAAGG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGCTAACATCCCTGCCTaGCTGGCTCCTTTATTAGTG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFANIPA*LAPLLV Trigger: CACTAATAAAGGAGCCAGCCAGGCAGGGATGTTAGC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTTGGGATCATATACTTaGCGCCCAAGCCCATACACA | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFLGSYT*RPSPYT Trigger: TGTGTATGGGCTTGGGCGGCAAGTATATGATCCCAA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR TCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCAAAGGACTAAATACTaGGCTCCTTCTGTGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFQRTKY*APSVWI Trigger: GATCCACACAGAAGGAGCTCAGTATTTAGTCCTTTG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR TCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTAGAGCAACTCTACATTaGTACATTGGCACAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFRATLH*YIGTNR Trigger: CCTGTTTGTGCCAATGTATCAATGTAGAGTTGCTCT...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTTATTAGTGCCCATCTaGAGACTAATTGTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFLLVPI*RLIVVW Trigger: CCAGACCACAATTAGTCTGCAGATGGGCACTAATAA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR GCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGGATCTAATAATCAATaGCTTGGTCGCTATATTGGT | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFGSNNQ*LGRYIG Trigger: ACCAATATAGCGACCAAGGCATTGATTATTAGATCC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR CCA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCCTGATGATCATACTTaGAAGCAATCTCTTTACATA | + |
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Preference number: 4 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFPDDHT*KQSLYI Trigger: TATGTAAAGAGATTGCTTCCAAGTATGATCATCAGG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545882.5 |
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| CDS GCA 90 bp | TGGGCGACTGGGTCCAACTGGGTGCTACAGAGCCTCGAGCTCCGCTaGGAAGCACCCGGCTGCCTCGCTCGCCGCCCGCACCTCGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: WATGSNWVLQSLELR*EAPGCLARRPHLGS Trigger: GGAACCGAGGTGCGGGCGGCGAGCGAGGCAGCCGGGTGCTTCGCAGCGGAGCTCGAGGCTCTGTAGCACCCAGTTGGACCCAGTCGCCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394202.8 |
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| CDS CCA 90 bp | GTTGAAGTGGGTCATGGTGGTTCGGGCGGCGGGAAGAGACAGCGCTaGGGTCCGGGGTCTCTCGCACTTCGCTTCCCCGCTCCTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: VEVGHGGSGGGKRQR*GPGSLALRFPAPGP Trigger: GGGGCCAGGAGCGGGGAAGCGAAGTGCGAGAGACCCCGGACCCCAGCGCTGTCTCTTCCCGCCGCCCGAACCACCATGACCCACTTCAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS TCA 90 bp | TCGCTTCACACCGCCTACCCCCGCAGCCCCGGGATGTTCCAGCTCTaGCAATGCCAGTGCCTTCCACCAGCGGTCGGACGGTGCGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SLHTAYPRSPGMFQL*QCQCLPPAVGRCGG Trigger: GCCACCGCACCGTCCGACCGCTGGTGGAAGGCACTGGCATTGTCAGAGCTGGAACATCCCGGGGCTGCGGGGGTAGGCGGTGTGAAGCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000415017.1 ENST00000545882.5 |
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| CDS TCA 90 bp | ATGCCAGTGCCTTCCACCAGCGGTCGGACGGTGCGGTGGCAATCCTaGCATGCTTGGGCTCCCGGGAGGTTAATGGGAATTAAACCACAG | + |
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Preference number: 5 (lower is better) Translates to: MPVPSTSGRTVRWQS*HAWAPGRLMGIKPQ Trigger: CTGTGGTTTAATTCCCATTAACCTCCCGGGAGCCCAAGCATGTCAGGATTGCCACCGCACCGTCCGACCGCTGGTGGAAGGCACTGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415017.1 ENST00000545882.5 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCTGGGCCTTCGAGGATaGGCCGCCGGGCCCGACCAA | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFLGLRG*AAGPDQ Trigger: TTGGTCGGGCCCGGCGGCCAATCCTCGAAGGCCCAG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394202.8 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTAAGCCCAGCTGGAAGTaGGGGCCAATGCTCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFKPSWK*GPMLMP Trigger: AGGCATGAGCATTGGCCCCAACTTCCAGCTGGGCTT...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTGCAATCCTGACATGCTaGGGCTCCCGGGAGGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFAILTC*GSREVN Trigger: ATTAACCTCCCGGGAGCCCAAGCATGTCAGGATTGC...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545882.5 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCCATCTGTAGGGAAATaGTCGAGTTGTCCACCGGCT | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFPSVGK*SSCPPA Trigger: AGCCGGTGGACAACTCGACAATTTCCCTACAGATGG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTTCAGTGAGGACTCGTaGACCTTCTTCACTGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFFSEDS*TFFTEP Trigger: AGGCTCAGTGAAGAAGGTCAACGAGTCCTCACTGAA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTTTGGGATCATATACTaGCCGCCCAAGCCCATACAC | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFFGIIY*PPKPIH Trigger: GTGTATGGGCTTGGGCGGCAAGTATATGATCCCAAA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTTACTTGGAAGCAATCTaGTTCTTGACTTCGGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFYLEAI*FLTSAE Trigger: CTCGGCCGAAGTCAAGAACAAGATTGCTTCCAAGTA...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTATTTGTTCCTGTTCCTaGGCTTCCGTTGTGAATGAC | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFICSCS*ASVVND Trigger: GTCATTCACAACGGAAGCCAAGGAACAGGAACAAAT...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS-3UTR CAA 90 bp | CAAATGCATCACCCAGGCCTAAATGTCCACAGGCCACTTTTGTACATGCTCTTTCTCCAATGTCAATGGTaGTATGGAATCCTTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: QMHHPGLNVHRPLLYMLFLQCQW*YGILLF Trigger: AAACAAAAGGATTCCATACAACCATTGACATTGGAG...AAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370206.9 ENST00000394202.8 ENST00000545882.5 |
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| CDS CCA 72 bp | CAGGCCGCCCCCGCCTCCGCCTGGGCCTTCGAGGATTaGCCGCCGGGCCCGACCAATGGAGGGCCGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QAAPASAWAFED*PPGPTNGGPPP Trigger: AGGAGGCGGCCCTCCATTGGTCGGGCCCGGCGGCCAATCCTCGAAGGCCCAGGCGGAGGCGGGGGCGGCCTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394202.8 |
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| CDS CAA 72 bp | ACAGGCCGCCCCCGCCTCCGCCTGGGCCTTCGAGGATaGGCCGCCGGGCCCGACCAATGGAGGGCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TGRPRLRLGLRG*AAGPDQWRAAS Trigger: GGAGGCGGCCCTCCATTGGTCGGGCCCGGCGGCCAATCCTCGAAGGCCCAGGCGGAGGCGGGGGCGGCCTGT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394202.8 |
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| CDS GCA 72 bp | CCGCTCCTGGCCCCGAGGAGTGGCCGCCGCGGGGGATaGTCGAACTCCCTCCTCTGGGAGGCGCAGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: PLLAPRSGRRGG*SNSLLWEAQET Trigger: CGTCTCCTGCGCCTCCCAGAGGAGGGAGTTCGAGCATCCCCCGCGGCGGCCACTCCTCGGGGCCAGGAGCGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS GCA 72 bp | GGGTCCAACTGGGTGCTACAGAGCCTCGAGCTCCGCTaGGAAGCACCCGGCTGCCTCGCTCGCCGCCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: GSNWVLQSLELR*EAPGCLARRPH Trigger: GTGCGGGCGGCGAGCGAGGCAGCCGGGTGCTTCGCAGCGGAGCTCGAGGCTCTGTAGCACCCAGTTGGACCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394202.8 |
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| CDS CCA 72 bp | CGGGGCGCGGGCGGTGCCTGGGCGACTGGGTCCAACTaGGTGCTACAGAGCCTCGAGCTCCGCTGCGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RGAGGAWATGSN*VLQSLELRCEA Trigger: TGCTTCGCAGCGGAGCTCGAGGCTCTGTAGCACCCAGTTGGACCCAGTCGCCCAGGCACCGCCCGCGCCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS CCA 72 bp | GGTCATGGTGGTTCGGGCGGCGGGAAGAGACAGCGCTaGGGTCCGGGGTCTCTCGCACTTCGCTTCCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GHGGSGGGKRQR*GPGSLALRFPA Trigger: AGCGGGGAAGCGAAGTGCGAGAGACCCCGGACCCCAGCGCTGTCTCTTCCCGCCGCCCGAACCACCATGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370206.9 ENST00000394202.8 |
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| CDS TCA 72 bp | CCTTCCACCAGCGGTCGGACGGTGCGGTGGCAATCCTaGCATGCTTGGGCTCCCGGGAGGTTAATGGGAATT | + |
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Preference number: 6 (lower is better) Translates to: PSTSGRTVRWQS*HAWAPGRLMGI Trigger: AATTCCCATTAACCTCCCGGGAGCCCAAGCATGTCAGGATTGCCACCGCACCGTCCGACCGCTGGTGGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415017.1 ENST00000545882.5 |
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| CDS GCA 72 bp | ATCTTTCACCCGGGAGTCCTGAGGCCTCAGTCAAAATaGAGCATCTCATACAAAGGCCTAGCAAACATGGCT | + |
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Preference number: 6 (lower is better) Translates to: IFHPGVLRPQSK*SISYKGLANMA Trigger: AGCCATGTTTGCTAGGCCTTTGTATGAGATGCTGCATTTTGACTGAGGCCTCAGGACTCCCGGGTGAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474409.1 |
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| CDS TCA 72 bp | GATCATACTTGGAAGCAATCTTTCACCCGGGAGTCCTaGGGCCTCAGTCAAAATGCAGCATCTCATACAAAG | + |
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Preference number: 6 (lower is better) Translates to: DHTWKQSFTRES*GLSQNAASHTK Trigger: CTTTGTATGAGATGCTGCATTTTGACTGAGGCCTCAGGACTCCCGGGTGAAAGATTGCTTCCAAGTATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474409.1 |
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