Pregenerated sensors for CNN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000064666

Ensembl transcript IDs: ENST00000562015.5, ENST00000569352.6

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	GAGCAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACGGGCAGAAGAATCGCTTaGACCTGGGAGTTGGAGGTT	+
Preference number: 2 (lower is better) Translates to: EQVMVERRGDLHWVHWLTGRRIA*TWELEV Trigger: AACCTCCAACTCCCAGGTTCAAGCGATTCTTCTGCC...CGTGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
3UTR-3UTR GCA 90 bp	TGGAGCAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACTGGGAGTTGGAGGTTaGAGTGAGCTGAGATCACGC	+
Preference number: 2 (lower is better) Translates to: WSRSWWREEGTFTGCTGSLGVGG*SELRSR Trigger: GCGTGATCTCAGCTCACTGCAACCTCCAACTCCCAG...TGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
3UTR-3UTR GCA 90 bp	CAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACGCCTAAACAAACAGAAATTTaGAAACGAGTGAATGCAGCA	+
Preference number: 2 (lower is better) Translates to: QVMVERRGDLHWVHWLTPKQTEI*KRVNAA Trigger: TGCTGCATTCACTCGTTTGCAAATTTCTGTTTGTTT...AGGCGTGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
3UTR-3UTR CAA 90 bp	CAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACGCCTGCTGAGATCACGCCATaGCACTCCAGCCTGAGTGAC	+
Preference number: 3 (lower is better) Translates to: QVMVERRGDLHWVHWLTPAEITP*HSSLSD Trigger: GTCACTCAGGCTGGAGTGCAATGGCGTGATCTCAGC...AGGCGTGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS-3UTR CCA 90 bp	TGGAGCAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCAGTGGCTGCCCCTCTCTaGGCCTCACCTTCCCCGCCA	+
Preference number: 4 (lower is better) Translates to: WSRSWWREEGTFTGCTGSVAAPL*ASPSPP Trigger: TGGCGGGGAAGGTGAGGCCCAGAGAGGGGCAGCCAC...TGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTGCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS-3UTR TCA 90 bp	GAGCAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACGATCCACCTCGCTGTGTaGCTCTGGGCAGGTGGCTGC	+
Preference number: 4 (lower is better) Translates to: EQVMVERRGDLHWVHWLTIHLAV*LWAGGC Trigger: GCAGCCACCTGCCCAGAGTCACACAGCGAGGTGGAT...CGTGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS-3UTR CCA 90 bp	TGGAGCAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCAGGGTGGAGCAGGTCATaGTGGAGAGAAGAGGGGACC	+
Preference number: 4 (lower is better) Translates to: WSRSWWREEGTFTGCTGSGWSRS*WREEGT Trigger: GGTCCCCTCTTCTCTCCACCATGACCTGCTCCACCC...TGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS-3UTR GCA 90 bp	CAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACGCCTCTGGGAGTTGGAGGTTaGAGTGAGCTGAGATCACGC	+
Preference number: 4 (lower is better) Translates to: QVMVERRGDLHWVHWLTPLGVGG*SELRSR Trigger: GCGTGATCTCAGCTCACTGCAACCTCCAACTCCCAG...AGGCGTGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS-3UTR GCA 90 bp	GAGCAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACGTTGCAAACGAGTGAATaGAGCAGCTACATCCACCTC	+
Preference number: 4 (lower is better) Translates to: EQVMVERRGDLHWVHWLTLQTSE*SSYIHL Trigger: GAGGTGGATGTAGCTGCTGCATTCACTCGTTTGCAA...CGTGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS-3UTR TCA 90 bp	CAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACGCCTAAATTTGCAAACGAGTaGATGCAGCAGCTACATCCA	+
Preference number: 4 (lower is better) Translates to: QVMVERRGDLHWVHWLTPKFANE*MQQLHP Trigger: TGGATGTAGCTGCTGCATTCACTCGTTTGCAAATTT...AGGCGTGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS-3UTR GCA 90 bp	GAGCAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCACGAAACAAACAGAAATTTaGAAACGAGTGAATGCAGCA	+
Preference number: 4 (lower is better) Translates to: EQVMVERRGDLHWVHWLTKQTEI*KRVNAA Trigger: TGCTGCATTCACTCGTTTGCAAATTTCTGTTTGTTT...CGTGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS-3UTR CAA 90 bp	TGGAGCAGGTCATGGTGGAGAGAAGAGGGGACCTTCACTGGGTGCACTGGCTCAGCTGAGATCACGCCATaGCACTCCAGCCTGAGTGAC	+
Preference number: 5 (lower is better) Translates to: WSRSWWREEGTFTGCTGSAEITP*HSSLSD Trigger: GTCACTCAGGCTGGAGTGCAATGGCGTGATCTCAGC...TGAGCCAGTGCACCCAGTGAAGGTCCCCTCTTCTCTCCACCATGACCTGCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569352.6
CDS CCA 72 bp	GGACAGGAGCTTGAACGGACCTTCTCGAAGGTTGAGTaGGCGCCAGGGGCTTCACACGTGGGGGTCCTGGGG	+
Preference number: 6 (lower is better) Translates to: GQELERTFSKVE*APGASHVGVLG Trigger: CCCCAGGACCCCCACGTGTGAAGCCCCTGGCGCCCACTCAACCTTCGAGAAGGTCCGTTCAAGCTCCTGTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562015.5
CDS CAA 72 bp	TATTTGGACAGGAGCTTGAACGGACCTTCTCGAAGGTaGAGTGGGCGCCAGGGGCTTCACACGTGGGGGTCC	+
Preference number: 6 (lower is better) Translates to: YLDRSLNGPSRR*SGRQGLHTWGS Trigger: GGACCCCCACGTGTGAAGCCCCTGGCGCCCACTCAACCTTCGAGAAGGTCCGTTCAAGCTCCTGTCCAAATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562015.5