RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130176

Ensembl transcript IDs: ENST00000252456.7, ENST00000535659.6, ENST00000585869.1, ENST00000586059.5, ENST00000586577.1, ENST00000587087.5, ENST00000588468.1, ENST00000588935.1, ENST00000592338.5, ENST00000592923.5

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATaGAGTTTGCTCCCACTGCGGGAATGGGGTGGGGGCAGGCCGAGC +
Preference number: 1 (lower is better)
Translates to: SRCKPNRVCPLGLWA*SLLPLREWGGGRPS
Trigger: GCTCGGCCTGCCCCCACCCCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR CCA 90 bp TATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTaGGCATGCAGTTTGCTCCCACTGCGGGAATGGGGTGGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: YASRCKPNRVCPLGL*ACSLLPLREWGGGR
Trigger: CCTGCCCCCACCCCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR CCA 90 bp CTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTaGAGGATGCCATGCAGGGAGAGGGGGTCGGCTGGGCCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: LSPNSNPVEVEFYRG*RMPCRERGSAGPGW
Trigger: CCAGCCAGGCCCAGCCGACCCCCTCTCCCTGCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
3UTR CCA 90 bp CCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTaGGTCTCTGGGCATGCAGTTTGCTCCCACTGCGGGAATGGGGTG +
Preference number: 1 (lower is better)
Translates to: PHSMPVAANQTACVR*VSGHAVCSHCGNGV
Trigger: CACCCCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR GCA 90 bp AGAAAGTGCTCTCATTACAAACGCCACTGTCACATCCACATAGTATaGCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTG +
Preference number: 1 (lower is better)
Translates to: RKCSHYKRHCHIHIV*QSLQTKPRVSAGSL
Trigger: CAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGAGCACTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR GCA 90 bp GACCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCA +
Preference number: 2 (lower is better)
Translates to: DLAWQPIHRHAPLRGALVPGSKI*RLVPGA
Trigger: TGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGG...AACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
3UTR-3UTR CCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCGGAGAGGGGGTCGGCTaGGCCTGGCTGGGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: VAANQTACVRWVSGHAVCGEGVG*AWLGPA
Trigger: GGCTGGACCCAGCCAGGCCCAGCCGACCCCCTCTCC...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGGAGAGGGGGTCGGCTaGGCCTGGCTGGGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: MPVAANQTACVRWVSGHAGEGVG*AWLGPA
Trigger: GGCTGGACCCAGCCAGGCCCAGCCGACCCCCTCTCC...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp TCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTGGGGTCGGCTGGGCCTaGCTGGGTCCAGCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: SLQTKPRVSAGSLGMQFAGVGWA*LGPAKS
Trigger: GCTCTTGGCTGGACCCAGCCAGGCCCAGCCGACCCC...AGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTATCGGCTGGGCCTGGCTaGGTCCAGCCAAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVSAGPG*VQPRAA
Trigger: TGCTGCTCTTGGCTGGACCCAGCCAGGCCCAGCCGA...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCGGCTGGGCCTGGCTaGGTCCAGCCAAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: VAANQTACVRWVSGHAVCSAGPG*VQPRAA
Trigger: TGCTGCTCTTGGCTGGACCCAGCCAGGCCCAGCCGA...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGGAGAGGGGGTCGGCTaGGCCTGGCTGGGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRGEGVG*AWLGPA
Trigger: GGCTGGACCCAGCCAGGCCCAGCCGACCCCCTCTCC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
3UTR-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGAGAGGGGGTCGGCTaGGCCTGGCTGGGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRGEGVG*AWLGPA
Trigger: GGCTGGACCCAGCCAGGCCCAGCCGACCCCCTCTCC...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
3UTR-3UTR CCA 90 bp GTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGGCTCAGTGCGTCCTTTaGGCGCTGTTGGGGACACCC +
Preference number: 2 (lower is better)
Translates to: VCQSLQTKPRVSAGSLGMAQCVL*ALLGTP
Trigger: GGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGC...CATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGGGGTCGGCTGGGCCTaGCTGGGTCCAGCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCGVGWA*LGPAKS
Trigger: GCTCTTGGCTGGACCCAGCCAGGCCCAGCCGACCCC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
3UTR-3UTR CCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTGCTGGGGGAGCTTCTaGTCCTGGGGGTACCCACTT +
Preference number: 2 (lower is better)
Translates to: VAANQTACVRWVSGHAVCCWGSF*SWGYPL
Trigger: AAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCA...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR CAA 90 bp GGGGACAGCTGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTaGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGC +
Preference number: 2 (lower is better)
Translates to: GDSWNSVAQCVLWAL*GTPGSMLDPVALQS
Trigger: GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCAGCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp GTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGGAGTTCTACAGGGGCTaGAGGATGCCATGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: VCQSLQTKPRVSAGSLGMEFYRG*RMPCRE
Trigger: CTCCCTGCATGGCATCCTCCAGCCCCTGTAGAACTC...CATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGAGTTCTACAGGGGCTaGAGGATGCCATGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVEFYRG*RMPCRE
Trigger: CTCCCTGCATGGCATCCTCCAGCCCCTGTAGAACTC...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTCGGCTGGGCCTGGCTaGGTCCAGCCAAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRSAGPG*VQPRAA
Trigger: TGCTGCTCTTGGCTGGACCCAGCCAGGCCCAGCCGA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
3UTR-3UTR CCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCTCTGGGGGCTTTGCTaGGGGAGCTTCTGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: PLSHPHSMPVAANQTACVLWGLC*GSFWSW
Trigger: CCAGGACCAGAAGCTCCCCCAGCAAAGCCCCCAGAG...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR GCA 90 bp TCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTAATAGCGTTGCTCAGTaGGTCCTTTGGGCGCTGTTG +
Preference number: 2 (lower is better)
Translates to: SLQTKPRVSAGSLGMQFANSVAQ*VLWALL
Trigger: CAACAGCGCCCAAAGGACGCACTGAGCAACGCTATT...AGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp TCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACTGCGGGAATGGGGTaGGGGCAGGCCGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SLQTPLSHPHSMPVAANQTAGMG*GQAEPG
Trigger: CCCAGGCTCGGCCTGCCCCCACCCCATTCCCGCAGT...TTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CCA 90 bp TCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAACTCTGGGGGCTTTGCTaGGGGAGCTTCTGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: SLQTPLSHPHSMPVAANQLWGLC*GSFWSW
Trigger: CCAGGACCAGAAGCTCCCCCAGCAAAGCCCCCAGAG...TTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR GCA 72 bp ACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTaGTCCCACTGCGGGAATGGGGTGGGGGCAGGCCGA +
Preference number: 3 (lower is better)
Translates to: TACVRWVSGHAV*SHCGNGVGAGR
Trigger: TCGGCCTGCCCCCACCCCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR GCA 72 bp CTGCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTaGTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGC +
Preference number: 3 (lower is better)
Translates to: LPICRLTLSVSQ*SMPSPGSKICR
Trigger: GCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
3UTR-3UTR CAA 90 bp GTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGTGCTCAGTGCGTCCTTaGGGCGCTGTTGGGGACACC +
Preference number: 3 (lower is better)
Translates to: VCQSLQTKPRVSAGSLGMCSVRP*GAVGDT
Trigger: GGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA...CATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR CCA 72 bp CGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTaGGCATGCAGTTTGCTCCCACTGCGGGAATGGGGT +
Preference number: 3 (lower is better)
Translates to: RCKPNRVCPLGL*ACSLLPLREWG
Trigger: ACCCCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR CCA 72 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTaGGTCTCTGGGCATGCAGTTTGCTCCCACTGCGGG +
Preference number: 3 (lower is better)
Translates to: MPVAANQTACVR*VSGHAVCSHCG
Trigger: CCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CAA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTTGCTCAGTGCGTCCTTaGGGCGCTGTTGGGGACACC +
Preference number: 3 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTCSVRP*GAVGDT
Trigger: GGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR CCA 72 bp GGGGACAGCTGGAATAGCGTTGCTCAGTGCGTCCTTTaGGCGCTGTTGGGGACACCCGGCTCTATGTTGGAC +
Preference number: 3 (lower is better)
Translates to: GDSWNSVAQCVL*ALLGTPGSMLD
Trigger: GTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCAGCTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CAA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCGTCCTTTGGGCGCTGTaGGGGACACCCGGCTCTATG +
Preference number: 3 (lower is better)
Translates to: PLSHPHSMPVAANQTACVVLWAL*GTPGSM
Trigger: CATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGAC...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR-3UTR CAA 90 bp AAAGTGCTCTCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGTCCTTTGGGCGCTGTaGGGGACACCCGGCTCTATG +
Preference number: 3 (lower is better)
Translates to: KVLSLQTPLSHPHSMPVAVLWAL*GTPGSM
Trigger: CATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGAC...AGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGAGCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR GCA 72 bp TCTCATTACAAACGCCACTGTCACATCCACATAGTATaGCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCT +
Preference number: 3 (lower is better)
Translates to: SHYKRHCHIHIV*QSLQTKPRVSA
Trigger: AGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp GCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCAGGGTCCTGGGCCTTaGCGGCGTGTCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AHLQADIERVAVLHAQPRQGPGP*RRVPGA
Trigger: GGCCCCCGGGACACGCCGTCAAGGCCCAGGACCCTG...CCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp CGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCGGCCCATACACCGTCATaGCCCGCTGCGAGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: RSAPCPAPARRSAAWSLAAHTPS*PAARRP
Trigger: AGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGC...CGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp CCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTGCTTGAGCGTGTCGCAGTaGTCCATGCCCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PGVAAHTPSCPAARRPCCLSVSQ*SMPSPG
Trigger: GCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAA...GCAACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp CGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCGGGTCTGTGCCCAGCTTaGGGTCGTAGAGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: RSAPCPAPARRSAAWSLAGLCPA*GRRGGA
Trigger: GGCGCCACCTCTACGACCCCAAGCTGGGCACAGACC...CGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp CGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCCTGCGAAGGGTGGTGTaGTCAGGCCGTGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RVAVLHAQPRLEDLPLGPLRRVV*SGRGVA
Trigger: GGCCACCCCACGGCCTGACCACACCACCCTTCGCAG...GGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp GACCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTCCAGCCTGCGAAGGGTaGTGTGGTCAGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: DLAWQPIHRHAPLRGALVPACEG*CGQAVG
Trigger: CCCCACGGCCTGACCACACCACCCTTCGCAGGCTGG...AACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp TCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCAGAGGTGGCGCCGGGTaGCATAGGCCGTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: SQCSMPSPGSKICRLVPGRGGAG*HRPSCP
Trigger: AGGGCATGACGGCCTATGGCACCCGGCGCCACCTCT...GCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp CAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCGCACTGCCGCTTGGTCCCTaGCGCAGTCATGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QCSMPSPGSKICRLVPGALPLGP*RSHASL
Trigger: CAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAG...TGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp TGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCGGAGAGGGGGTCGGCTaGGCCTGGCTGGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CSVRPLGAVGDTRLYVGPGEGVG*AWLGPA
Trigger: GGCTGGACCCAGCCAGGCCCAGCCGACCCCCTCTCC...GGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCGGGGCCCCCACTCACCTaGCTGGCTCCTTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSAPCPAPARRSAAWSLAGPPLT*LAPLLV
Trigger: CACCAACAAAGGAGCCAGCCAGGTGAGTGGGGGCCC...CGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp GACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGGGGTGGCCAGGGTCCTaGGCCTTGACGGCGTGTCCC +
Preference number: 4 (lower is better)
Translates to: DIERVAVLHAQPRLEDLPGWPGS*ALTACP
Trigger: GGGACACGCCGTCAAGGCCCAGGACCCTGGCCACCC...CGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586577.1
3UTR CAA 72 bp AACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTaGCTCCCACTGCGGGAATGGGGTGGGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: NRVCPLGLWACS*LPLREWGGGRP
Trigger: CGGCCTGCCCCCACCCCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCGCATGTCGCAGTGCTCCATaGCCAGCCCCGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: QCSMPSPGSKICRLVPGACRSAP*PAPARR
Trigger: TCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACA...TGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp CAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCGCATCCCTGGCGCAGTCATaGCAGCCTGCGAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QCSMPSPGSKICRLVPGASLAQS*QPAKGG
Trigger: ACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGA...TGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp AAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGCGGGAGGACATGCTGGCCGGTaGGCTCTGGCGGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KPRVSAGSLGMQFAPTAGGHAGR*ALAGAV
Trigger: CACTGCCCCCGCCAGAGCCCACCGGCCAGCATGTCC...TCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTGCGCCAGGAGGGTGGACTaGACCTGTGTATGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PGVAAHTPSCPAARRPCCARRVD*TCVWLV
Trigger: CACCAACCATACACAGGTGCAGTCCACCCTCCTGGC...GCAACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp CTTTGCTGGGGGAGCTTCTGGTCCTGGGGGTACCCACTTGTGAGGGAGTGGGGGAGAGGTGGCGCCGGGTaGCATAGGCCGTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: LCWGSFWSWGYPLVREWGRGGAG*HRPSCP
Trigger: AGGGCATGACGGCCTATGGCACCCGGCGCCACCTCT...CCCCCACTCCCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCCCAGAGGCTGGTCTGTaGCCAGCTTGGGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: RVAVLHAQPRLEDLPLGPPEAGL*PAWGRR
Trigger: TCTACGACCCCAAGCTGGGCACAGACCAGCCTCTGG...GGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp ACCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTGGCAGTCATGCCAGCCTaGGAAGGGTGGTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TWRGSPYTVMPRCEAPLLAVMPA*EGWCGQ
Trigger: CTGACCACACCACCCTTCGCAGGCTGGCATGACTGC...CAACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp ACCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTGTCGTCTTCGCCATGCTaGCCAAAGCCAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TWRGSPYTVMPRCEAPLLSSSPC*PKPGGW
Trigger: CCACCCTCCTGGCTTTGGCCAGCATGGCGAAGACGA...CAACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp GTAGACCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTAGGCTGATGGTCGCCTaGTCCAGAGGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VDLAWQPIHRHAPLRGALRLMVA*SRGWSV
Trigger: CACAGACCAGCCTCTGGACCAGGCGACCATCAGCCT...AAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR TCA 90 bp CTGCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCTGCCCATCTGCAGGCTaGTGGTCGCCTGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPICRLTLSVSQCSMPSPCPSAG*WSPGPE
Trigger: CTCTGGACCAGGCGACCATCAGCCTGCAGATGGGCA...GGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp GACCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTCTTTCGTCTTCGCCATaGTGGCCAAAGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: DLAWQPIHRHAPLRGALVLSSSP*WPKPGG
Trigger: CCCTCCTGGCTTTGGCCAGCATGGCGAAGACGAAAG...AACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp GGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCGGTTGAGCGTGTCGCAGTaGTCCATGCCCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GAVGDTRLYVGPCSTTERLSVSQ*SMPSPG
Trigger: GCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAA...CCGCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCGGTCTGTGCCCAGCTTaGGGTCGTAGAGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: CSVRPLGAVGDTRLYVGPGLCPA*GRRGGA
Trigger: GGCGCCACCTCTACGACCCCAAGCTGGGCACAGACC...GGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp GGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCGGCTGCCGCTTGGTCCCTaGCGCAGTCATGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GAVGDTRLYVGPCSTTERLPLGP*RSHASL
Trigger: CAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAG...CCGCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGGGGTCGGCTGGGCCTaGCTGGGTCCAGCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTGVGWA*LGPAKS
Trigger: GCTCTTGGCTGGACCCAGCCAGGCCCAGCCGACCCC...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTGGGGCAGGCCGAGCCTaGGCTCTGGGGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLQTKPRVSAGSLGMQFAGAGRA*ALGALL
Trigger: CAGCAAAGCCCCCAGAGCCCAGGCTCGGCCTGCCCC...AGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp GCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCCCCACTCACCTGGCTaGCTCCTTTGTTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: AHLQADIERVAVLHAQPRPHSPG*LLCWCP
Trigger: TGGGCACCAACAAAGGAGCCAGCCAGGTGAGTGGGG...CCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR TCA 90 bp GGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCGGCCCCTGCCGCACTTCTaGTGCCCGCTTCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GAVGDTRLYVGPCSTTERPLPHF*CPLPAF
Trigger: AAAGGCAGGAAGCGGGCATCAGAAGTGCGGCAGGGG...CCGCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR GCA 90 bp GCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGTGCCATAGGCCGTCATaGCCTGCTGGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: AHLQADIERVAVLHAQPRCHRPS*PAGWQT
Trigger: AGTTTGCCAGCCAGCAGGGCATGACGGCCTATGGCA...CCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCAGAGGTGGCGCCGGGTaGCATAGGCCGTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: WALLGTPGSMLDPVALQSRGGAG*HRPSCP
Trigger: AGGGCATGACGGCCTATGGCACCCGGCGCCACCTCT...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: VAANQTACVRWVSGHAVCPGSKI*RLVPGA
Trigger: TGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGG...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTATTGAGCGTGTCGCAGTaGTCCATGCCCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVLSVSQ*SMPSPG
Trigger: GCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAA...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CTTTGCTGGGGGAGCTTCTGGTCCTGGGGGTACCCACTTGTGAGGGAGTGGGGGAGGCTGATGGTCGCCTaGTCCAGAGGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LCWGSFWSWGYPLVREWGRLMVA*SRGWSV
Trigger: CACAGACCAGCCTCTGGACCAGGCGACCATCAGCCT...CCCCCACTCCCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTCTGCCGCTTGGTCCCTaGCGCAGTCATGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSLPLGP*RSHASL
Trigger: CAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAG...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp AAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGCGGGATGTGCGTGGTGGTTGTaGGCGGGCTCACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KPRVSAGSLGMQFAPTAGCAWWL*AGSPSS
Trigger: AGAGCTGGGTGAGCCCGCCCACAACCACCACGCACA...TCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCTCGGCTGGGCCTGGCTaGGTCCAGCCAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WALLGTPGSMLDPVALQSSAGPG*VQPRAA
Trigger: TGCTGCTCTTGGCTGGACCCAGCCAGGCCCAGCCGA...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp CGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCCCATCTGCAGCCCAATaGTGTTCCGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: RVAVLHAQPRLEDLPLGPPSAAQ*CSALLL
Trigger: TAAGAGAAGGGCGGAACATCATTGGGCTGCAGATGG...GGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR TCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTGCCCATCTGCAGGCTaGTGGTCGCCTGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VAANQTACVRWVSGHAVCCPSAG*WSPGPE
Trigger: CTCTGGACCAGGCGACCATCAGCCTGCAGATGGGCA...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTATGCCCATCTGCAGGCTaGTGGTCGCCTGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVCPSAG*WSPGPE
Trigger: CTCTGGACCAGGCGACCATCAGCCTGCAGATGGGCA...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CTTTGCTGGGGGAGCTTCTGGTCCTGGGGGTACCCACTTGTGAGGGAGTGGGGGTGCCATAGGCCGTCATaGCCTGCTGGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: LCWGSFWSWGYPLVREWGCHRPS*PAGWQT
Trigger: AGTTTGCCAGCCAGCAGGGCATGACGGCCTATGGCA...CCCCCACTCCCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCACAGTCAGGAGACCCCTaGCGCACTTCTGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: MPVAANQTACVRWVSGHAQSGDP*RTSDAR
Trigger: GCGGGCATCAGAAGTGCGGCAGGGGTCTCCTGACTG...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR CCA 90 bp CGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCGCCGATGTTCTCCAGCTaGTGCCAATTTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: RSAPCPAPARRSAAWSLAPMFSS*CQFWVD
Trigger: GTCAACCCAAAATTGGCACCAGCTGGAGAACATCGG...CGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp GCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCCAAAGCCAGGAGGGTaGACTGCACCTGTGTATGGT +
Preference number: 4 (lower is better)
Translates to: AHLQADIERVAVLHAQPRPKPGG*TAPVYG
Trigger: ACCATACACAGGTGCAGTCCACCCTCCTGGCTTTGG...CCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp GACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGGTCGTAGACCTGGCGTaGCAGCCCATACACCGTCAT +
Preference number: 4 (lower is better)
Translates to: DIERVAVLHAQPRLEDLPVVDLA*QPIHRH
Trigger: ATGACGGTGTATGGGCTGCCACGCCAGGTCTACGAC...CGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGGAGAGGGGGTCGGCTaGGCCTGGCTGGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCGEGVG*AWLGPA
Trigger: GGCTGGACCCAGCCAGGCCCAGCCGACCCCCTCTCC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCGGAGAGGGGGTCGGCTaGGCCTGGCTGGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVGEGVG*AWLGPA
Trigger: GGCTGGACCCAGCCAGGCCCAGCCGACCCCCTCTCC...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCCTCTGGGGGCTTTGCTaGGGGAGCTTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WALLGTPGSMLDPVALQSLWGLC*GSFWSW
Trigger: CCAGGACCAGAAGCTCCCCCAGCAAAGCCCCCAGAG...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGGGCCTCGGTTGAAGTaGGCAGAGGACATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTGPRLK*AEDMLA
Trigger: GGCCAGCATGTCCTCTGCTCACTTCAACCGAGGCCC...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTAGGCAGGGCCTCGGTTaGAGTGAGCAGAGGACATGC +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSRQGLG*SEQRTC
Trigger: GCATGTCCTCTGCTCACTTCAACCGAGGCCCTGCCT...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp GGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCGGGCCAGGAGGGTGGACTaGACCTGTGTATGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GAVGDTRLYVGPCSTTERARRVD*TCVWLV
Trigger: CACCAACCATACACAGGTGCAGTCCACCCTCCTGGC...CCGCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCCCAGAGGCTGGTCTGTaGCCAGCTTGGGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: VAANQTACVRWVSGHAVCPEAGL*PAWGRR
Trigger: TCTACGACCCCAAGCTGGGCACAGACCAGCCTCTGG...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCCTGGGTCTCTGGGCATaGAGTTTGCTCCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: VAANQTACVRWVSGHAVCLGLWA*SLLPLR
Trigger: CCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAG...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCACTGGGTCTCTGGGCATaGAGTTTGCTCCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: MPVAANQTACVRWVSGHALGLWA*SLLPLR
Trigger: CCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAG...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGACATGCTGGCCGGTaGGCTCTGGCGGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRGHAGR*ALAGAV
Trigger: CACTGCCCCCGCCAGAGCCCACCGGCCAGCATGTCC...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCAGCTCCTGCTCCCGCTaGTGGTCATACTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VAANQTACVRWVSGHAVCSSCSR*WSYFWA
Trigger: GGCCCAGAAGTATGACCACCAGCGGGAGCAGGAGCT...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CTTTGCTGGGGGAGCTTCTGGTCCTGGGGGTACCCACTTGTGAGGGAGTGGGGGCCAAAGCCAGGAGGGTaGACTGCACCTGTGTATGGT +
Preference number: 4 (lower is better)
Translates to: LCWGSFWSWGYPLVREWGPKPGG*TAPVYG
Trigger: ACCATACACAGGTGCAGTCCACCCTCCTGGCTTTGG...CCCCCACTCCCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTTCGTCTTCGCCATGCTaGCCAAAGCCAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSSSSPC*PKPGGW
Trigger: CCACCCTCCTGGCTTTGGCCAGCATGGCGAAGACGA...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAAGGCTGATGGTCGCCTaGTCCAGAGGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVRLMVA*SRGWSV
Trigger: CACAGACCAGCCTCTGGACCAGGCGACCATCAGCCT...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCCGAAGATCTGCCGCTTaGTCCCTGGCGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: WALLGTPGSMLDPVALQSRRSAA*SLAQSC
Trigger: GCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCG...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TTGCTGCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCGAAGATCTGCCGCTTaGTCCCTGGCGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: LLPICRLTLSVSQCSMPSRRSAA*SLAQSC
Trigger: GCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCG...GCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp GGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCGGGTCGTAGACCTGGCGTaGCAGCCCATACACCGTCAT +
Preference number: 4 (lower is better)
Translates to: GAVGDTRLYVGPCSTTERVVDLA*QPIHRH
Trigger: ATGACGGTGTATGGGCTGCCACGCCAGGTCTACGAC...CCGCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTGGGCTCACCCAGCTCTaGGTACTCGGGAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSGLTQL*VLGSQT
Trigger: TGTCTGACTCCCGAGTACCCAGAGCTGGGTGAGCCC...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCGGGGTCGGCTGGGCCTaGCTGGGTCCAGCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVGVGWA*LGPAKS
Trigger: GCTCTTGGCTGGACCCAGCCAGGCCCAGCCGACCCC...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCGAGTTCTACAGGGGCTaGAGGATGCCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CSVRPLGAVGDTRLYVGPEFYRG*RMPCRE
Trigger: CTCCCTGCATGGCATCCTCCAGCCCCTGTAGAACTC...GGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp AAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGCGGGATCCTTTGGGCGCTGTTaGGGACACCCGGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: KPRVSAGSLGMQFAPTAGSFGRC*GHPALC
Trigger: ACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGA...TCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGCTCAGTGCGTCCTTTaGGCGCTGTTGGGGACACCC +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTAQCVL*ALLGTP
Trigger: GGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGC...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGGCTCAGTGCGTCCTTTaGGCGCTGTTGGGGACACCC +
Preference number: 4 (lower is better)
Translates to: HSMPVAANQTACVRWVSGAQCVL*ALLGTP
Trigger: GGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGC...CCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTATGCTGGGGGAGCTTCTaGTCCTGGGGGTACCCACTT +
Preference number: 4 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVCWGSF*SWGYPL
Trigger: AAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCA...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTCTTTCGTCTTCGCCATaGTGGCCAAAGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSLSSSP*WPKPGG
Trigger: CCCTCCTGGCTTTGGCCAGCATGGCGAAGACGAAAG...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCATGCCATAGGCCGTCATaGCCTGCTGGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: MPVAANQTACVRWVSGHACHRPS*PAGWQT
Trigger: AGTTTGCCAGCCAGCAGGGCATGACGGCCTATGGCA...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGCCCATACACCGTCATaGCCCGCTGCGAGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRAHTPS*PAARRP
Trigger: AGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR GCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGCCCATACACCGTCATaGCCCGCTGCGAGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRAHTPS*PAARRP
Trigger: AGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGC...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR GCA 90 bp CATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCTGATGCCCGCTTCCTaGCTTTCACCGTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: HSMPVAANQTACVRWVSGLMPAS*LSPSPS
Trigger: AGAGGGGGACGGTGAAAGGCAGGAAGCGGGCATCAG...CCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAGGACATGCTGGCCGGTaGGCTCTGGCGGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPGHAGR*ALAGAV
Trigger: CACTGCCCCCGCCAGAGCCCACCGGCCAGCATGTCC...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGAGCAGAGGACATGCTaGCCGGTGGGCTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWREQRTC*PVGSGG
Trigger: CCCGCCAGAGCCCACCGGCCAGCATGTCCTCTGCTC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCGCACCTGTGTATGGTTaGTGTTCTCAAACAGGTCGT +
Preference number: 4 (lower is better)
Translates to: RVAVLHAQPRLEDLPLGPAPVYG*CSQTGR
Trigger: ACGACCTGTTTGAGAACACCAACCATACACAGGTGC...GGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGCAGTCATGCCAGCCTaGCTGGCTCCTTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: MPVAANQTACVRWVSGHAAVMPA*LAPLLV
Trigger: CACCAACAAAGGAGCCAGCCAGGCTGGCATGACTGC...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp GGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCGGGAGTCAGACAGTACTTaGGGTCGTAGACCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: GAVGDTRLYVGPCSTTERESDST*GRRPGV
Trigger: CACGCCAGGTCTACGACCCCAAGTACTGTCTGACTC...CCGCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGGGGCTCACCCAGCTCTaGGTACTCGGGAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: HSMPVAANQTACVRWVSGGLTQL*VLGSQT
Trigger: TGTCTGACTCCCGAGTACCCAGAGCTGGGTGAGCCC...CCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCTTTGGGCGCTGTTaGGGACACCCGGCTCTATGT +
Preference number: 4 (lower is better)
Translates to: VAANQTACVRWVSGHAVCSFGRC*GHPALC
Trigger: ACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGA...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp GTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCCACTTGTGAGGGAGTaGGGGGACAGCTGGAATAGC +
Preference number: 4 (lower is better)
Translates to: VCQSLQTKPRVSAGSLGMPLVRE*GDSWNS
Trigger: GCTATTCCAGCTGTCCCCCCACTCCCTCACAAGTGG...CATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGGGAGCTTCTGGTCCTaGGGGTACCCACTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTGSFWS*GYPLVR
Trigger: CCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCC...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAACTGCGGGAATGGGGTaGGGGCAGGCCGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPTAGMG*GQAEPG
Trigger: CCCAGGCTCGGCCTGCCCCCACCCCATTCCCGCAGT...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCACTCCCACTGCGGGAATaGGGTGGGGGCAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPLPLRE*GGGRPS
Trigger: GCTCGGCCTGCCCCCACCCCATTCCCGCAGTGGGAG...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp GTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGTGTCCGCTGGGTCTCTaGGCATGCAGTTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VCQSLQTKPRVSAGSLGMCPLGL*ACSLLP
Trigger: TGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACA...CATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTCACTCTCTCAGCTCCTaGTCCCGCTGGTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTHSLSS*SRWWSY
Trigger: GTATGACCACCAGCGGGAGCAGGAGCTGAGAGAGTG...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTCTTTCGTCTTCGCCATaGTGGCCAAAGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTLSSSP*WPKPGG
Trigger: CCCTCCTGGCTTTGGCCAGCATGGCGAAGACGAAAG...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp GCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGTCGAATTTCCGCTCCTaGTTCTCTGCGTACTTCACT +
Preference number: 4 (lower is better)
Translates to: AHLQADIERVAVLHAQPRSNFRS*FSAYFT
Trigger: AGTGAAGTACGCAGAGAAGCAGGAGCGGAAATTCGA...CCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCAGAGGTGGCGCCGGGTaGCATAGGCCGTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCRGGAG*HRPSCP
Trigger: AGGGCATGACGGCCTATGGCACCCGGCGCCACCTCT...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVPGSKI*RLVPGA
Trigger: TGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGG...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCPGSKI*RLVPGA
Trigger: TGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGG...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTTGAGCGTGTCGCAGTaGTCCATGCCCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRLSVSQ*SMPSPG
Trigger: GCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR GCA 90 bp CATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGTCTGGGCATGCAGTTTaGTCCCACTGCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: HSMPVAANQTACVRWVSGSGHAV*SHCGNG
Trigger: CCCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGA...CCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGCCTCAAAAATGTCGTaGGGCTTCACCCCATACTTG +
Preference number: 4 (lower is better)
Translates to: LPICRLTLSVSQCSMPSPASKMS*GFTPYL
Trigger: CAAGTATGGGGTGAAGCCCCACGACATTTTTGAGGC...GGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTACCAAAGCCAGGAGGGTaGACTGCACCTGTGTATGGT +
Preference number: 4 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVPKPGG*TAPVYG
Trigger: ACCATACACAGGTGCAGTCCACCCTCCTGGCTTTGG...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGGTCTGTGCCCAGCTTaGGGTCGTAGAGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCGLCPA*GRRGGA
Trigger: GGCGCCACCTCTACGACCCCAAGCTGGGCACAGACC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCTGCCGCTTGGTCCCTaGCGCAGTCATGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRLPLGP*RSHASL
Trigger: CAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGAGTCAGACAGTACTTaGGGTCGTAGACCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVESDST*GRRPGV
Trigger: CACGCCAGGTCTACGACCCCAAGTACTGTCTGACTC...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTGAGTTCTACAGGGGCTaGAGGATGCCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLQTKPRVSAGSLGMQFAEFYRG*RMPCRE
Trigger: CTCCCTGCATGGCATCCTCCAGCCCCTGTAGAACTC...AGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp GTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGTACTTCTGGGCCAGCTaGGACCCCAGCTATTTGCCT +
Preference number: 4 (lower is better)
Translates to: VCQSLQTKPRVSAGSLGMYFWAS*DPSYLP
Trigger: AGGCAAATAGCTGGGGTCCCAGCTGGCCCAGAAGTA...CATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR TCA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTCCATCTGCAGCCCAATaGTGTTCCGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSPSAAQ*CSALLL
Trigger: TAAGAGAAGGGCGGAACATCATTGGGCTGCAGATGG...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTGCCCATCTGCAGGCTaGTGGTCGCCTGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRCPSAG*WSPGPE
Trigger: CTCTGGACCAGGCGACCATCAGCCTGCAGATGGGCA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR TCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGCCCCTGCCGCACTTCTaGTGCCCGCTTCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRPLPHF*CPLPAF
Trigger: AAAGGCAGGAAGCGGGCATCAGAAGTGCGGCAGGGG...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR TCA 90 bp TGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTACCCAACCATAGCATaGAGGTGGTGTCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: CSVRPLGAVGDTRLYVGPYPTIA*RWCPGI
Trigger: GATACCTGGACACCACCTTCATGCTATGGTTGGGTA...GGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR GCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTCCCTGGCGCAGTCATaGCAGCCTGGCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRSLAQS*QPGWLL
Trigger: AAGGAGCCAGCCAGGCTGGCATGACTGCGCCAGGGA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTCCCTGGCGCAGTCATaGCAGCCTGGCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRSLAQS*QPGWLL
Trigger: AAGGAGCCAGCCAGGCTGGCATGACTGCGCCAGGGA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCTGTCGCAGTGCTCCATaGCCAGCCCCGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVCRSAP*PAPARR
Trigger: TCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACA...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCTGTCGCAGTGCTCCATaGCCAGCCCCGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCCRSAP*PAPARR
Trigger: TCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACA...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTGTCGCAGTGCTCCATaGCCAGCCCCGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRCRSAP*PAPARR
Trigger: TCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCAATAGCGTTGCTCAGTaGGTCCTTTGGGCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WALLGTPGSMLDPVALQSNSVAQ*VLWALL
Trigger: CAACAGCGCCCAAAGGACGCACTGAGCAACGCTATT...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCAGTCAGGAGACCCCTaGCGCACTTCTGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCQSGDP*RTSDAR
Trigger: GCGGGCATCAGAAGTGCGGCAGGGGTCTCCTGACTG...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAGGTCTGTGCCCAGCTTaGGGTCGTAGAGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPGLCPA*GRRGGA
Trigger: GGCGCCACCTCTACGACCCCAAGCTGGGCACAGACC...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTGTGCGTGGTGGTTGTaGGCGGGCTCACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRCAWWL*AGSPSS
Trigger: AGAGCTGGGTGAGCCCGCCCACAACCACCACGCACA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTGTGCGTGGTGGTTGTaGGCGGGCTCACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRCAWWL*AGSPSS
Trigger: AGAGCTGGGTGAGCCCGCCCACAACCACCACGCACA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATCGGCTGGGCCTGGCTaGGTCCAGCCAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPSAGPG*VQPRAA
Trigger: TGCTGCTCTTGGCTGGACCCAGCCAGGCCCAGCCGA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCTCTGGGGGCTTTGCTaGGGGAGCTTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRLWGLC*GSFWSW
Trigger: CCAGGACCAGAAGCTCCCCCAGCAAAGCCCCCAGAG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
3UTR CAA 72 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTaGGGGACACCCGGCTCTATGTTGGACCCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWAL*GTPGSMLDPVA
Trigger: TGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAGGGCCTCGGTTGAAGTaGGCAGAGGACATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPGPRLK*AEDMLA
Trigger: GGCCAGCATGTCCTCTGCTCACTTCAACCGAGGCCC...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR TCA 90 bp TGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTTTGGGTTGACTCATTaGTCTTCTTCACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CSVRPLGAVGDTRLYVGPFGLTH*SSSRSL
Trigger: CAGGCTCCGTGAAGAAGATCAATGAGTCAACCCAAA...GGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCCAGAGGCTGGTCTGTaGCCAGCTTGGGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCPEAGL*PAWGRR
Trigger: TCTACGACCCCAAGCTGGGCACAGACCAGCCTCTGG...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp TTGTTGCTGCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCTTGTTGCTGCCCATCTaGAGGCTGACATTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LLLPICRLTLSVSQCSMPLLLPI*RLTLSV
Trigger: CACGCTCAATGTCAGCCTGCAGATGGGCAGCAACAA...GGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGCAGCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTTTGTTGCTGCCCATCTaGAGGCTGACATTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTLLLPI*RLTLSV
Trigger: CACGCTCAATGTCAGCCTGCAGATGGGCAGCAACAA...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCTGATGCCCGCTTCCTaGCTTTCACCGTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCLMPAS*LSPSPS
Trigger: AGAGGGGGACGGTGAAAGGCAGGAAGCGGGCATCAG...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCAGCTCCTGCTCCCGCTaGTGGTCATACTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCSSCSR*WSYFWA
Trigger: GGCCCAGAAGTATGACCACCAGCGGGAGCAGGAGCT...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGCCTCAAAAATGTCGTaGGGCTTCACCCCATACTTG +
Preference number: 4 (lower is better)
Translates to: MPVAANQTACVRWVSGHAASKMS*GFTPYL
Trigger: CAAGTATGGGGTGAAGCCCCACGACATTTTTGAGGC...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATGACTGCACCTGTGTATaGTTGGTGTTCTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: QADIERVAVLHAQPRLEDDCTCV*LVFSNR
Trigger: CCTGTTTGAGAACACCAACCATACACAGGTGCAGTC...ATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTCGTCTTCGCCATGCTaGCCAAAGCCAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRSSSPC*PKPGGW
Trigger: CCACCCTCCTGGCTTTGGCCAGCATGGCGAAGACGA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCGAAGATCTGCCGCTTaGTCCCTGGCGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRRRSAA*SLAQSC
Trigger: GCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGGGCTCACCCAGCTCTaGGTACTCGGGAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCGLTQL*VLGSQT
Trigger: TGTCTGACTCCCGAGTACCCAGAGCTGGGTGAGCCC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGTGCGTGGTGGTTGTaGGCGGGCTCACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPCAWWL*AGSPSS
Trigger: AGAGCTGGGTGAGCCCGCCCACAACCACCACGCACA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp AAAGTGCTCTCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTCTCCCACTGCGGGAATaGGGTGGGGGCAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: KVLSLQTPLSHPHSMPVALPLRE*GGGRPS
Trigger: GCTCGGCCTGCCCCCACCCCATTCCCGCAGTGGGAG...AGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGAGCACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCACCGCGTGTGTCCGCTaGGTCTCTGGGCATGCAGTT +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCTACVR*VSGHAV
Trigger: AACTGCATGCCCAGAGACCCAGCGGACACACGCGGT...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAAGGCAGGGCCTCGGTTaGAGTGAGCAGAGGACATGC +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPRQGLG*SEQRTC
Trigger: GCATGTCCTCTGCTCACTTCAACCGAGGCCCTGCCT...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR TCA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCATTTGGGTTGACTCATTaGTCTTCTTCACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: MPVAANQTACVRWVSGHAFGLTH*SSSRSL
Trigger: CAGGCTCCGTGAAGAAGATCAATGAGTCAACCCAAA...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCTCCTCACATGTTTTTaGAGCTCCGGAGGCGACCCG +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVLLTCF*SSGGDP
Trigger: CGGGTCGCCTCCGGAGCTTCAAAAACATGTGAGGAG...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR TCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGAACAGAGGCAGCGGCTaGAGTTCCGTCTGCACACTC +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRNRGSG*SSVCTL
Trigger: GAGTGTGCAGACGGAACTTCAGCCGCTGCCTCTGTT...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR TCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCAACAGAGGCAGCGGCTaGAGTTCCGTCTGCACACTC +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVNRGSG*SSVCTL
Trigger: GAGTGTGCAGACGGAACTTCAGCCGCTGCCTCTGTT...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR GCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCACTCTCTCAGCTCCTaGTCCCGCTGGTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRHSLSS*SRWWSY
Trigger: GTATGACCACCAGCGGGAGCAGGAGCTGAGAGAGTG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCTTCACGGAGCCTGGCTaGAGCTTATTGATGAATTCG +
Preference number: 4 (lower is better)
Translates to: WALLGTPGSMLDPVALQSFTEPG*SLLMNS
Trigger: CGAATTCATCAATAAGCTGCAGCCAGGCTCCGTGAA...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp GCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGATGTTCTCCAGCTGGTaGCAATTTTGGGTTGACTCA +
Preference number: 4 (lower is better)
Translates to: ADIERVAVLHAQPRLEDLMFSSW*QFWVDS
Trigger: TGAGTCAACCCAAAATTGGCACCAGCTGGAGAACAT...CAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR GCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGCCAGGAGGGTGGACTaGACCTGTGTATGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRARRVD*TCVWLV
Trigger: CACCAACCATACACAGGTGCAGTCCACCCTCCTGGC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCTTTCGTCTTCGCCATaGTGGCCAAAGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRLSSSP*WPKPGG
Trigger: CCCTCCTGGCTTTGGCCAGCATGGCGAAGACGAAAG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTCTGGGCATGCAGTTTaGTCCCACTGCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRSGHAV*SHCGNG
Trigger: CCCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCTGTCGCAGTGCTCCATaGCCAGCCCCGGCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCCRSAP*PAPAQK
Trigger: TTTTTGAGCCGGGGCTGGGCATGGAGCACTGCGACA...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587087.5
CDS-3UTR CCA 90 bp GTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCTTCTTCACGGAGCCTaGCTGCAGCTTATTGATGAA +
Preference number: 4 (lower is better)
Translates to: VCQSLQTKPRVSAGSLGMLLHGA*LQLIDE
Trigger: TTCATCAATAAGCTGCAGCCAGGCTCCGTGAAGAAG...CATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTCTTCTTCACGGAGCCTaGCTGCAGCTTATTGATGAA +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSLLHGA*LQLIDE
Trigger: TTCATCAATAAGCTGCAGCCAGGCTCCGTGAAGAAG...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCGATGTTCTCCAGCTaGTGCCAATTTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: SLQTKPRVSAGSLGMQFAPMFSS*CQFWVD
Trigger: GTCAACCCAAAATTGGCACCAGCTGGAGAACATCGG...AGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTGCCTCAAAAATGTCGTaGGGCTTCACCCCATACTTG +
Preference number: 4 (lower is better)
Translates to: SLQTKPRVSAGSLGMQFAASKMS*GFTPYL
Trigger: CAAGTATGGGGTGAAGCCCCACGACATTTTTGAGGC...AGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCGCACCTGTGTATGGTTaGTGTTCTCAAACAGGTCGT +
Preference number: 4 (lower is better)
Translates to: WALLGTPGSMLDPVALQSAPVYG*CSQTGR
Trigger: ACGACCTGTTTGAGAACACCAACCATACACAGGTGC...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAAGGCTGATGGTCGCCTaGTCCAGAGGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPRLMVA*SRGWSV
Trigger: CACAGACCAGCCTCTGGACCAGGCGACCATCAGCCT...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGCAGTCATGCCAGCCTaGCTGGCTCCTTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRAVMPA*LAPLLV
Trigger: CACCAACAAAGGAGCCAGCCAGGCTGGCATGACTGC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCGCAGTCATGCCAGCCTaGCTGGCTCCTTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVAVMPA*LAPLLV
Trigger: CACCAACAAAGGAGCCAGCCAGGCTGGCATGACTGC...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGTCGTAGACCTGGCGTaGCAGCCCATACACCGTCAT +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRVVDLA*QPIHRH
Trigger: ATGACGGTGTATGGGCTGCCACGCCAGGTCTACGAC...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGTCGTAGACCTGGCGTaGCAGCCCATACACCGTCAT +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCVVDLA*QPIHRH
Trigger: ATGACGGTGTATGGGCTGCCACGCCAGGTCTACGAC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGAGTTCTACAGGGGCTaGAGGATGCCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWREFYRG*RMPCRE
Trigger: CTCCCTGCATGGCATCCTCCAGCCCCTGTAGAACTC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGAGTTCTACAGGGGCTaGAGGATGCCATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCEFYRG*RMPCRE
Trigger: CTCCCTGCATGGCATCCTCCAGCCCCTGTAGAACTC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCCACTTGTGAGGGAGTaGGGGGACAGCTGGAATAGC +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCPLVRE*GDSWNS
Trigger: GCTATTCCAGCTGTCCCCCCACTCCCTCACAAGTGG...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAGGGAGCTTCTGGTCCTaGGGGTACCCACTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPGSFWS*GYPLVR
Trigger: CCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCC...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCTGTCCGCTGGGTCTCTaGGCATGCAGTTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVCPLGL*ACSLLP
Trigger: TGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACA...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAACCGCGTGTGTCCGCTaGGTCTCTGGGCATGCAGTT +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPTACVR*VSGHAV
Trigger: AACTGCATGCCCAGAGACCCAGCGGACACACGCGGT...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCACTCCTCACATGTTTTTaGAGCTCCGGAGGCGACCCG +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPLLTCF*SSGGDP
Trigger: CGGGTCGCCTCCGGAGCTTCAAAAACATGTGAGGAG...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTCTCCAGCTGGTaGCAATTTTGGGTTGACTCA +
Preference number: 4 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSMFSSW*QFWVDS
Trigger: TGAGTCAACCCAAAATTGGCACCAGCTGGAGAACAT...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAATGTTCTCCAGCTGGTaGCAATTTTGGGTTGACTCA +
Preference number: 4 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVMFSSW*QFWVDS
Trigger: TGAGTCAACCCAAAATTGGCACCAGCTGGAGAACAT...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTTCGAATTTCCGCTCCTaGTTCTCTGCGTACTTCACT +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTSNFRS*FSAYFT
Trigger: AGTGAAGTACGCAGAGAAGCAGGAGCGGAAATTCGA...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCATAGGCCGTCATaGCCTGCTGGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPCHRPS*PAGWQT
Trigger: AGTTTGCCAGCCAGCAGGGCATGACGGCCTATGGCA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGCACCTGTGTATGGTTaGTGTTCTCAAACAGGTCGT +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTAPVYG*CSQTGR
Trigger: ACGACCTGTTTGAGAACACCAACCATACACAGGTGC...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTGACTGCACCTGTGTATaGTTGGTGTTCTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: SLQTKPRVSAGSLGMQFADCTCV*LVFSNR
Trigger: CCTGTTTGAGAACACCAACCATACACAGGTGCAGTC...AGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCCAAAGCCAGGAGGGTaGACTGCACCTGTGTATGGT +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCPKPGG*TAPVYG
Trigger: ACCATACACAGGTGCAGTCCACCCTCCTGGCTTTGG...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAGTCGTAGACCTGGCGTaGCAGCCCATACACCGTCAT +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPVVDLA*QPIHRH
Trigger: ATGACGGTGTATGGGCTGCCACGCCAGGTCTACGAC...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGAGTCAGACAGTACTTaGGGTCGTAGACCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCESDST*GRRPGV
Trigger: CACGCCAGGTCTACGACCCCAAGTACTGTCTGACTC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGAGTCAGACAGTACTTaGGGTCGTAGACCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRESDST*GRRPGV
Trigger: CACGCCAGGTCTACGACCCCAAGTACTGTCTGACTC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR TCA 90 bp AAAGTGCTCTCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGGGCCTCGGTTGAAGTaGGCAGAGGACATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KVLSLQTPLSHPHSMPVAGPRLK*AEDMLA
Trigger: GGCCAGCATGTCCTCTGCTCACTTCAACCGAGGCCC...AGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGAGCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR TCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGCCATCTGCAGCCCAATaGTGTTCCGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRPSAAQ*CSALLL
Trigger: TAAGAGAAGGGCGGAACATCATTGGGCTGCAGATGG...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR TCA 90 bp CCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCCATCTGCAGCCCAATaGTGTTCCGCCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PLSHPHSMPVAANQTACVPSAAQ*CSALLL
Trigger: TAAGAGAAGGGCGGAACATCATTGGGCTGCAGATGG...GACACACGCGGTTTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp TCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAATCCCTGGCGCAGTCATaGCAGCCTGGCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLQTPLSHPHSMPVAANQSLAQS*QPGWLL
Trigger: AAGGAGCCAGCCAGGCTGGCATGACTGCGCCAGGGA...TTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTTGTTGCTGCCCATCTaGAGGCTGACATTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRLLLPI*RLTLSV
Trigger: CACGCTCAATGTCAGCCTGCAGATGGGCAGCAACAA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCTTGTTGCTGCCCATCTaGAGGCTGACATTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCLLLPI*RLTLSV
Trigger: CACGCTCAATGTCAGCCTGCAGATGGGCAGCAACAA...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR GCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGAATAGCGTTGCTCAGTaGGTCCTTTGGGCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRNSVAQ*VLWALL
Trigger: CAACAGCGCCCAAAGGACGCACTGAGCAACGCTATT...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCTGGTGGTCATACTTCTaGGCCAGCTGCTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCWWSYF*ASCFTW
Trigger: CCAGGTAAAGCAGCTGGCCCAGAAGTATGACCACCA...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS-3UTR GCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATTGTTGCTGCCCATCTaGAGGCTGACATTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPLLLPI*RLTLSV
Trigger: CACGCTCAATGTCAGCCTGCAGATGGGCAGCAACAA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp AAAGTGCTCTCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTAGCTCCTGCTCCCGCTaGTGGTCATACTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KVLSLQTPLSHPHSMPVASSCSR*WSYFWA
Trigger: GGCCCAGAAGTATGACCACCAGCGGGAGCAGGAGCT...AGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGAGCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTAGCTGGTGCCAATTTTaGGTTGACTCATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTSWCQF*VDSLIF
Trigger: GAAGATCAATGAGTCAACCCAAAATTGGCACCAGCT...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TTGTTGCTGCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCTGGTGCCAATTTTaGGTTGACTCATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: LLLPICRLTLSVSQCSMPSWCQF*VDSLIF
Trigger: GAAGATCAATGAGTCAACCCAAAATTGGCACCAGCT...GGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGCAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCCGATGTTCTCCAGCTaGTGCCAATTTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCPMFSS*CQFWVD
Trigger: GTCAACCCAAAATTGGCACCAGCTGGAGAACATCGG...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGCCTCAAAAATGTCGTaGGGCTTCACCCCATACTTG +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRASKMS*GFTPYL
Trigger: CAAGTATGGGGTGAAGCCCCACGACATTTTTGAGGC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp TCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAATCGTCTTCGCCATGCTaGCCAAAGCCAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLQTPLSHPHSMPVAANQSSSPC*PKPGGW
Trigger: CCACCCTCCTGGCTTTGGCCAGCATGGCGAAGACGA...TTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAACGAAGATCTGCCGCTTaGTCCCTGGCGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: SLQTPLSHPHSMPVAANQRRSAA*SLAQSC
Trigger: GCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCG...TTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGGCTCAAAAATGTCGTaGGGCTTCACCCCATACTTG +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCGSKMS*GFTPYL
Trigger: CAAGTATGGGGTGAAGCCCCACGACATTTTTGAGCC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587087.5
CDS-3UTR TCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCTTTGGGTTGACTCATTaGTCTTCTTCACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCFGLTH*SSSRSL
Trigger: CAGGCTCCGTGAAGAAGATCAATGAGTCAACCCAAA...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR TCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATACCCAACCATAGCATaGAGGTGGTGTCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPYPTIA*RWCPGI
Trigger: GATACCTGGACACCACCTTCATGCTATGGTTGGGTA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp TCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAACACTCTCTCAGCTCCTaGTCCCGCTGGTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: SLQTPLSHPHSMPVAANQHSLSS*SRWWSY
Trigger: GTATGACCACCAGCGGGAGCAGGAGCTGAGAGAGTG...TTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTCGAATTTCCGCTCCTaGTTCTCTGCGTACTTCACT +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRSNFRS*FSAYFT
Trigger: AGTGAAGTACGCAGAGAAGCAGGAGCGGAAATTCGA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTGGTGGTCATACTTCTaGGCCAGCTTGTTCTTAACC +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRWWSYF*ASLFLT
Trigger: GGTTAAGAACAAGCTGGCCCAGAAGTATGACCACCA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252456.7
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGCTTCTTCACGGAGCCTaGCTGCAGCTTATTGATGAA +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRLLHGA*LQLIDE
Trigger: TTCATCAATAAGCTGCAGCCAGGCTCCGTGAAGAAG...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCTTCTTCACGGAGCCTaGCTGCAGCTTATTGATGAA +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRLLHGA*LQLIDE
Trigger: TTCATCAATAAGCTGCAGCCAGGCTCCGTGAAGAAG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCACCGATGTTCTCCAGCTaGTGCCAATTTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPPMFSS*CQFWVD
Trigger: GTCAACCCAAAATTGGCACCAGCTGGAGAACATCGG...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGCACCTGTGTATGGTTaGTGTTCTCAAACAGGTCGT +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCAPVYG*CSQTGR
Trigger: ACGACCTGTTTGAGAACACCAACCATACACAGGTGC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGACTGCACCTGTGTATaGTTGGTGTTCTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRDCTCV*LVFSNR
Trigger: CCTGTTTGAGAACACCAACCATACACAGGTGCAGTC...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR GCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATTCACGGAGCCTGGCTaGAGCTTATTGATGAATTCG +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPFTEPG*SLLMNS
Trigger: CGAATTCATCAATAAGCTGCAGCCAGGCTCCGTGAA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR GCA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCATGTTCTCCAGCTGGTaGCAATTTTGGGTTGACTCA +
Preference number: 4 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCMFSSW*QFWVDS
Trigger: TGAGTCAACCCAAAATTGGCACCAGCTGGAGAACAT...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR GCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAATGTTCTCCAGCTGGTaGCAATTTTGGGTTGACTCA +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPMFSSW*QFWVDS
Trigger: TGAGTCAACCCAAAATTGGCACCAGCTGGAGAACAT...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR GCA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCACACATCCACATAGTATaGCAGTCGCTGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPHIHIV*QSLQTK
Trigger: TTTGGTTTGCAGCGACTGGCATACTATGTGGATGTG...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGAGCTGGTGCCAATTTTaGGTTGACTCATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRSWCQF*VDSLIF
Trigger: GAAGATCAATGAGTCAACCCAAAATTGGCACCAGCT...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGAGCTGGTGCCAATTTTaGGTTGACTCATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRSWCQF*VDSLIF
Trigger: GAAGATCAATGAGTCAACCCAAAATTGGCACCAGCT...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CCA 90 bp AAAGTGCTCTCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTCCGATGTTCTCCAGCTaGTGCCAATTTTGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: KVLSLQTPLSHPHSMPVAPMFSS*CQFWVD
Trigger: GTCAACCCAAAATTGGCACCAGCTGGAGAACATCGG...AGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGAGCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp AAAGTGCTCTCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTTCGAATTTCCGCTCCTaGTTCTCTGCGTACTTCACT +
Preference number: 4 (lower is better)
Translates to: KVLSLQTPLSHPHSMPVASNFRS*FSAYFT
Trigger: AGTGAAGTACGCAGAGAAGCAGGAGCGGAAATTCGA...AGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGAGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp AAAGTGCTCTCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGACTGCACCTGTGTATaGTTGGTGTTCTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: KVLSLQTPLSHPHSMPVADCTCV*LVFSNR
Trigger: CCTGTTTGAGAACACCAACCATACACAGGTGCAGTC...AGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGAGAGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR GCA 90 bp TCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAACACATCCACATAGTATaGCAGTCGCTGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: SLQTPLSHPHSMPVAANQHIHIV*QSLQTK
Trigger: TTTGGTTTGCAGCGACTGGCATACTATGTGGATGTG...TTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CCA 90 bp TCATTACAAACGCCACTGTCACATCCACATAGTATGCCAGTCGCTGCAAACCAAAGCTGGTGCCAATTTTaGGTTGACTCATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: SLQTPLSHPHSMPVAANQSWCQF*VDSLIF
Trigger: GAAGATCAATGAGTCAACCCAAAATTGGCACCAGCT...TTGGTTTGCAGCGACTGGCATACTATGTGGATGTGACAGTGGCGTTTGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS CCA 90 bp CCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTGCGAAGGGTGGTGTaGTCAGGCCGTGGGGTGGCCAGGGTCCTGGGCCTTGACGGCGTG +
Preference number: 5 (lower is better)
Translates to: PLGPWRSHASLRRVV*SGRGVARVLGLDGV
Trigger: CACGCCGTCAAGGCCCAGGACCCTGGCCACCCCACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS GCA 90 bp CCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCGCAGTCATaGCAGCCTGCGAAGGGTGGTGTGGTCAGGCCGTGGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: PAPARRSAAWSLAQS*QPAKGGVVRPWGGQ
Trigger: CTGGCCACCCCACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS GCA 90 bp GGCTCGAAGATCTGCCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTaGGAAGGGTGGTGTGGTCAGGCCGTGGGGTGGCCAGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GSKICRLVPGAVMPA*EGWCGQAVGWPGSW
Trigger: CCAGGACCCTGGCCACCCCACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CCA 90 bp ATCTGCCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTGCGAAGGGTaGTGTGGTCAGGCCGTGGGGTGGCCAGGGTCCTGGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: ICRLVPGAVMPACEG*CGQAVGWPGSWALT
Trigger: CGTCAAGGCCCAGGACCCTGGCCACCCCACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CAA 90 bp GCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCAGGGTCCTGGGCCTaGACGGCGTGTCCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: ADIERVAVLHAQPRLEDLPGSWA*TACPGG
Trigger: GCCCCCGGGACACGCCGTCAAGGCCCAGGACCCTGG...CAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CCA 90 bp GTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTaGCGCAGTCATGCCAGCCTGCGAAGGGTGGTGTGGTCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: VLHAQPRLEDLPLGP*RSHASLRRVVWSGR
Trigger: ACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS GCA 90 bp TTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTGGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LSVSQCSMPSPGSKI*RLVPGAVMPAWLAP
Trigger: AGGAGCCAGCCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000588935.1
ENST00000592923.5
CDS GCA 90 bp TTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTGCGAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LSVSQCSMPSPGSKI*RLVPGAVMPACEGW
Trigger: CCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CCA 90 bp GTAGGCAGGGCCTCGGTTGAAGTGAGCAGAGGACATGCTGGCCGGTaGGCTCTGGCGGGGGCAGTGGCGGCACTGACGCTGAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: VGRASVEVSRGHAGR*ALAGAVAALTLRTE
Trigger: CTCTGTTCTCAGCGTCAGTGCCGCCACTGCCCCCGCCAGAGCCCACCGGCCAGCATGTCCTCTGCTCACTTCAACCGAGGCCCTGCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000588468.1
ENST00000592923.5
CDS CCA 90 bp TGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTaGTCCCTGGCGCAGTCATGCCAGCCTGCGAAGGGTGGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: CRSAPCPAPARRSAA*SLAQSCQPAKGGVV
Trigger: GACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS GCA 90 bp TTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTGCAGCCCAATG +
Preference number: 5 (lower is better)
Translates to: LSVSQCSMPSPGSKI*RLVPGAVMPACSPM
Trigger: CATTGGGCTGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592338.5
CDS-3UTR CAA 90 bp ACCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTGTCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATG +
Preference number: 5 (lower is better)
Translates to: TWRGSPYTVMPRCEAPLLSKICR*VPGAVM
Trigger: CATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGA...CAACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CAA 90 bp TCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTGGCATCTGCAGGCTGACATaGAGCGTGTCGCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: SQCSMPSPGSKICRLVPGICRLT*SVSQCS
Trigger: GGAGCACTGCGACACGCTCAATGTCAGCCTGCAGAT...GCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CCA 90 bp GTCCTTTGGGCGCCAGCTCTGGGTACTCGGGAGTCAGACAGTACTTaGGGTCGTAGACCTGGCGTGGCAGCCCATACACCGTCATGCCCC +
Preference number: 5 (lower is better)
Translates to: VLWAPALGTRESDST*GRRPGVAAHTPSCP
Trigger: GGGGCATGACGGTGTATGGGCTGCCACGCCAGGTCTACGACCCCAAGTACTGTCTGACTCCCGAGTACCCAGAGCTGGCGCCCAAAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588935.1
CDS-3UTR CAA 90 bp CTTTGCTGGGGGAGCTTCTGGTCCTGGGGGTACCCACTTGTGAGGGAGTGGGGGAGGCCGTCCATGAAGTaGTTGCCGATGCGACGGCCT +
Preference number: 5 (lower is better)
Translates to: LCWGSFWSWGYPLVREWGRPSMK*LPMRRP
Trigger: AGGCCGTCGCATCGGCAACAACTTCATGGACGGCCT...CCCCCACTCCCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp CTTTGCTGGGGGAGCTTCTGGTCCTGGGGGTACCCACTTGTGAGGGAGTGGGGGTCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATG +
Preference number: 5 (lower is better)
Translates to: LCWGSFWSWGYPLVREWGSKICR*VPGAVM
Trigger: CATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGA...CCCCCACTCCCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp AAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGCGGGACCGTCCATGAAGTTGTaGCCGATGCGACGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: KPRVSAGSLGMQFAPTAGPSMKL*PMRRPV
Trigger: GACAGGCCGTCGCATCGGCAACAACTTCATGGACGG...TCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp ACCTGGCGTGGCAGCCCATACACCGTCATGCCCCGCTGCGAGGCGCCCTTGTTGGGCTTCACCCCATACTaGGTGATGGCCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: TWRGSPYTVMPRCEAPLLGFTPY*VMALMK
Trigger: CTTCATCAAGGCCATCACCAAGTATGGGGTGAAGCC...CAACAAGGGCGCCTCGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CAA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTGTCCTTTGGGCGCTGTaGGGGACACCCGGCTCTATG +
Preference number: 5 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSVLWAL*GTPGSM
Trigger: CATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGAC...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCGTCCTTTGGGCGCTGTaGGGGACACCCGGCTCTATG +
Preference number: 5 (lower is better)
Translates to: VAANQTACVRWVSGHAVCVLWAL*GTPGSM
Trigger: CATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGAC...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCATGCTCAGTGCGTCCTTaGGGCGCTGTTGGGGACACC +
Preference number: 5 (lower is better)
Translates to: MPVAANQTACVRWVSGHACSVRP*GAVGDT
Trigger: GGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS GCA 90 bp AGGTGGTGTCCAGGTATCTTCCTAGCTCCACAGTCAGGAGACCCCTaGCGCACTTCTGATGCCCGCTTCCTGCCTTTCACCGTCCCCCTC +
Preference number: 5 (lower is better)
Translates to: RWCPGIFLAPQSGDP*RTSDARFLPFTVPL
Trigger: GAGGGGGACGGTGAAAGGCAGGAAGCGGGCATCAGAAGTGCGGCAGGGGTCTCCTGACTGTGGAGCTAGGAAGATACCTGGACACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp TGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCCGCTCCCCAATTTCTTaGTCAGGCCGGGGGATATGG +
Preference number: 5 (lower is better)
Translates to: CSVRPLGAVGDTRLYVGPRSPIS*SGRGIW
Trigger: CCATATCCCCCGGCCTGACAAAGAAATTGGGGAGCG...GGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR CAA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTCCGTCCATGAAGTTGTaGCCGATGCGACGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTPSMKL*PMRRPV
Trigger: GACAGGCCGTCGCATCGGCAACAACTTCATGGACGG...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp GTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCATCTGCAGGCTGACATaGAGCGTGTCGCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VAANQTACVRWVSGHAVCICRLT*SVSQCS
Trigger: GGAGCACTGCGACACGCTCAATGTCAGCCTGCAGAT...GCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTCTCTGGGCATGCAGTTaGCTCCCACTGCGGGAATGG +
Preference number: 5 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTLWACS*LPLREW
Trigger: CCATTCCCGCAGTGGGAGCAAACTGCATGCCCAGAG...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS TCA 90 bp GCGGCTGAAGTTCCGTCTGCACACTCTTCCCTCCTCACATGTTTTTaGAGCTCCGGAGGCGACCCGGGTCTCTTCCAGGGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: AAEVPSAHSSLLTCF*SSGGDPGLFQGRSI
Trigger: AATGGAACGGCCCTGGAAGAGACCCGGGTCGCCTCCGGAGCTTCAAAAACATGTGAGGAGGGAAGAGTGTGCAGACGGAACTTCAGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS GCA 90 bp TCTCTCAGCTCCTGCTCCCGCTGGTGGTCATACTTCTGGGCCAGCTaGTTTACCTGGGACCCCAGCTATTTGCCTCTCCTCTCCGAACCT +
Preference number: 5 (lower is better)
Translates to: SLSSCSRWWSYFWAS*FTWDPSYLPLLSEP
Trigger: AGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCAGGTAAAGCAGCTGGCCCAGAAGTATGACCACCAGCGGGAGCAGGAGCTGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS CCA 90 bp TCGATCCACTCTCTCAGCTCCTGCTCCCGCTGGTGGTCATACTTCTaGGCCAGCTGCTTTACCTGGGACCCCAGCTATTTGCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SIHSLSSCSRWWSYF*ASCFTWDPSYLPLL
Trigger: GAGGAGAGGCAAATAGCTGGGGTCCCAGGTAAAGCAGCTGGCCCAGAAGTATGACCACCAGCGGGAGCAGGAGCTGAGAGAGTGGATCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS CCA 90 bp TCTCTCAGCTCCTGCTCCCGCTGGTGGTCATACTTCTGGGCCAGCTaGGACCCCAGCTATTTGCCTCTCCTCTCCGAACCTCAGTTTACC +
Preference number: 5 (lower is better)
Translates to: SLSSCSRWWSYFWAS*DPSYLPLLSEPQFT
Trigger: GGTAAACTGAGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCAGCTGGCCCAGAAGTATGACCACCAGCGGGAGCAGGAGCTGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR CAA 90 bp CAGGCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATACTCCCACGTTCACCTaGTTTCCTTTCGTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: QADIERVAVLHAQPRLEDTPTFT*FPFVFA
Trigger: GGCGAAGACGAAAGGAAACAAGGTGAACGTGGGAGT...ATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CAA 90 bp AAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGCGGGAACTCCCACGTTCACCTaGTTTCCTTTCGTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: KPRVSAGSLGMQFAPTAGTPTFT*FPFVFA
Trigger: GGCGAAGACGAAAGGAAACAAGGTGAACGTGGGAGT...TCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp CAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTATCTGCAGGCTGACATaGAGCGTGTCGCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: QTKPRVSAGSLGMQFAPTICRLT*SVSQCS
Trigger: GGAGCACTGCGACACGCTCAATGTCAGCCTGCAGAT...AGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS CCA 90 bp TCCTGCTCCCGCTGGTGGTCATACTTCTGGGCCAGCTGCTTTACCTaGGACCCCAGCTATTTGCCTCTCCTCTCCGAACCTCAGTTTACC +
Preference number: 5 (lower is better)
Translates to: SCSRWWSYFWASCFT*DPSYLPLLSEPQFT
Trigger: GGTAAACTGAGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCAGGTAAAGCAGCTGGCCCAGAAGTATGACCACCAGCGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS-3UTR CAA 90 bp ATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCATACTTCTGGGCCAGCTaGTTCTTAACCTCGGCTGAC +
Preference number: 5 (lower is better)
Translates to: MPVAANQTACVRWVSGHAYFWAS*FLTSAD
Trigger: GTCAGCCGAGGTTAAGAACAAGCTGGCCCAGAAGTA...TGCATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252456.7
CDS-3UTR CAA 90 bp CTTTGCTGGGGGAGCTTCTGGTCCTGGGGGTACCCACTTGTGAGGGAGTGGGGGAGAATGATGCCATCTTaGAGGCCGTCCATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LCWGSFWSWGYPLVREWGRMMPS*RPSMKL
Trigger: CAACTTCATGGACGGCCTCAAAGATGGCATCATTCT...CCCCCACTCCCTCACAAGTGGGTACCCCCAGGACCAGAAGCTCCCCCAGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp TGGAATAGCGTTGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTGGCTTCACCCCATACTaGGTGATGGCCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: WNSVAQCVLWALLGTPGSGFTPY*VMALMK
Trigger: CTTCATCAAGGCCATCACCAAGTATGGGGTGAAGCC...AGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCAACGCTATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp GCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGTGCACCTGTGTATGGTaGGTGTTCTCAAACAGGTCG +
Preference number: 5 (lower is better)
Translates to: ADIERVAVLHAQPRLEDLCTCVW*VFSNRS
Trigger: CGACCTGTTTGAGAACACCAACCATACACAGGTGCA...CAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CAA 90 bp AAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGCAGTTTGCTCCCACTGCGGGATGCACCTGTGTATGGTaGGTGTTCTCAAACAGGTCG +
Preference number: 5 (lower is better)
Translates to: KPRVSAGSLGMQFAPTAGCTCVW*VFSNRS
Trigger: CGACCTGTTTGAGAACACCAACCATACACAGGTGCA...TCCCGCAGTGGGAGCAAACTGCATGCCCAGAGACCCAGCGGACACACGCGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCACTCCCACGTTCACCTaGTTTCCTTTCGTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: WALLGTPGSMLDPVALQSTPTFT*FPFVFA
Trigger: GGCGAAGACGAAAGGAAACAAGGTGAACGTGGGAGT...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCTGCTCAGTGCGTCCTTaGGGCGCTGTTGGGGACACC +
Preference number: 5 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCCSVRP*GAVGDT
Trigger: GGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS GCA 90 bp CCCGCTGGTGGTCATACTTCTGGGCCAGCTGGGACCCCAGCTATTTaGCTCTCCTCTCCGAACCTCAGTTTACCCAACCATAGCATGAAG +
Preference number: 5 (lower is better)
Translates to: PAGGHTSGPAGTPAI*LSSPNLSLPNHSMK
Trigger: CTTCATGCTATGGTTGGGTAAACTGAGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCAGCTGGCCCAGAAGTATGACCACCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS-3UTR CAA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCCGTCCATGAAGTTGTaGCCGATGCGACGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRPSMKL*PMRRPV
Trigger: GACAGGCCGTCGCATCGGCAACAACTTCATGGACGG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp GCTGACATTGAGCGTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGTACTTGGTGATGGCCTaGATGAAGTTGCCGATGTTC +
Preference number: 5 (lower is better)
Translates to: ADIERVAVLHAQPRLEDLYLVMA*MKLPMF
Trigger: GAACATCGGCAACTTCATCAAGGCCATCACCAAGTA...CAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS-3UTR CAA 90 bp TGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAGCACTACAGAGCTGCACCTGTGTATGGTaGGTGTTCTCAAACAGGTCG +
Preference number: 5 (lower is better)
Translates to: WALLGTPGSMLDPVALQSCTCVW*VFSNRS
Trigger: CGACCTGTTTGAGAACACCAACCATACACAGGTGCA...GCTCTGTAGTGCTACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATG +
Preference number: 5 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRSKICR*VPGAVM
Trigger: CATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCTGTAAGAATGATGCCATCTTaGAGGCCGTCCATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: QCVLWALLGTPGSMLDPVRMMPS*RPSMKL
Trigger: CAACTTCATGGACGGCCTCAAAGATGGCATCATTCT...TACAGGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp TGCTCAGTGCGTCCTTTGGGCGCTGTTGGGGACACCCGGCTCTATGTTGGACCCCCTGGCTGCAGCTTATaGATGAATTCGCAAAGAATG +
Preference number: 5 (lower is better)
Translates to: CSVRPLGAVGDTRLYVGPPGCSL*MNSQRM
Trigger: CATTCTTTGCGAATTCATCAATAAGCTGCAGCCAGG...GGGTCCAACATAGAGCCGGGTGTCCCCAACAGCGCCCAAAGGACGCACTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp GTATGCCAGTCGCTGCAAACCAAACCGCGTGTGTCCGCTGGGTCTCTGGGCATGTACTTGGTGATGGCCTaGATGAAGTTGCCGATGTTC +
Preference number: 5 (lower is better)
Translates to: VCQSLQTKPRVSAGSLGMYLVMA*MKLPMF
Trigger: GAACATCGGCAACTTCATCAAGGCCATCACCAAGTA...CATGCCCAGAGACCCAGCGGACACACGCGGTTTGGTTTGCAGCGACTGGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATG +
Preference number: 5 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPSKICR*VPGAVM
Trigger: CATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATCTGCAGGCTGACATaGAGCGTGTCGCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRICRLT*SVSQCS
Trigger: GGAGCACTGCGACACGCTCAATGTCAGCCTGCAGAT...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCATCTGCAGGCTGACATaGAGCGTGTCGCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCICRLT*SVSQCS
Trigger: GGAGCACTGCGACACGCTCAATGTCAGCCTGCAGAT...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCCTCCTCACATGTTTTaGAAGCTCCGGAGGCGACCC +
Preference number: 5 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRPPHMF*KLRRRP
Trigger: GGGTCGCCTCCGGAGCTTCAAAAACATGTGAGGAGG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCCGCTCCCCAATTTCTTaGTCAGGCCGGGGGATATGG +
Preference number: 5 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCRSPIS*SGRGIW
Trigger: CCATATCCCCCGGCCTGACAAAGAAATTGGGGAGCG...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTGGGACCCCAGCTATTaGCCTCTCCTCTCCGAACCT +
Preference number: 5 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRWDPSY*PLLSEP
Trigger: AGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS GCA 90 bp TTTCCTTTCGTCTTCGCCATGCTGGCCAAAGCCAGGAGGGTGGACTaGACCTGTGTATGGTTGGTGTTCTCAAACAGGTCGTTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: FPFVFAMLAKARRVD*TCVWLVFSNRSLAS
Trigger: TGAGGCCAACGACCTGTTTGAGAACACCAACCATACACAGGTGCAGTCCACCCTCCTGGCTTTGGCCAGCATGGCGAAGACGAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000586059.5
ENST00000586577.1
ENST00000592338.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGACAGCTGGAATAGCGTaGCTCAGTGCGTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRTAGIA*LSASFG
Trigger: CCCAAAGGACGCACTGAGCAACGCTATTCCAGCTGT...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCACAGCTGGAATAGCGTaGCTCAGTGCGTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCTAGIA*LSASFG
Trigger: CCCAAAGGACGCACTGAGCAACGCTATTCCAGCTGT...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252456.7
ENST00000592923.5
CDS-3UTR CAA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCACCTCCTCACATGTTTTaGAAGCTCCGGAGGCGACCC +
Preference number: 5 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPPPHMF*KLRRRP
Trigger: GGGTCGCCTCCGGAGCTTCAAAAACATGTGAGGAGG...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS GCA 90 bp ATGTTCCGCCCTTCTCTTAGCTTCCCCGGCTCGAATTTCCGCTCCTaGTTCTCTGCGTACTTCACTCCCACGTTCACCTTGTTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: MFRPSLSFPGSNFRS*FSAYFTPTFTLFPF
Trigger: GAAAGGAAACAAGGTGAACGTGGGAGTGAAGTACGCAGAGAAGCAGGAGCGGAAATTCGAGCCGGGGAAGCTAAGAGAAGGGCGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000586059.5
ENST00000586577.1
ENST00000592338.5
ENST00000592923.5
CDS GCA 90 bp GGTCATACTTCTGGGCCAGCTGCTTTACCTGGGACCCCAGCTATTTaGCTCTCCTCTCCGAACCTCAGTTTACCCAACCATAGCATGAAG +
Preference number: 5 (lower is better)
Translates to: GHTSGPAALPGTPAI*LSSPNLSLPNHSMK
Trigger: CTTCATGCTATGGTTGGGTAAACTGAGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCAGGTAAAGCAGCTGGCCCAGAAGTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS-3UTR CAA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCGGCTTCACCCCATACTaGGTGATGGCCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCGFTPY*VMALMK
Trigger: CTTCATCAAGGCCATCACCAAGTATGGGGTGAAGCC...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGGGCTTCACCCCATACTaGGTGATGGCCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRGFTPY*VMALMK
Trigger: CTTCATCAAGGCCATCACCAAGTATGGGGTGAAGCC...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGACTCCCACGTTCACCTaGTTTCCTTTCGTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRTPTFT*FPFVFA
Trigger: GGCGAAGACGAAAGGAAACAAGGTGAACGTGGGAGT...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAGGCTTCACCCCATACTaGGTGATGGCCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPGFTPY*VMALMK
Trigger: CTTCATCAAGGCCATCACCAAGTATGGGGTGAAGCC...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTGCACCTGTGTATGGTaGGTGTTCTCAAACAGGTCG +
Preference number: 5 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRCTCVW*VFSNRS
Trigger: CGACCTGTTTGAGAACACCAACCATACACAGGTGCA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGAACAAGTCTTCCCCCTaGTTCTTAACCTCGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRNKSSP*FLTSAD
Trigger: GTCAGCCGAGGTTAAGAACAAGGGGGAAGACTTGTT...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS TCA 90 bp CTATTTGCCTCTCCTCTCCGAACCTCAGTTTACCCAACCATAGCATaGAGGTGGTGTCCAGGTATCTTCCTAGCTCCACAGTCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: LFASPLRTSVYPTIA*RWCPGIFLAPQSGD
Trigger: GTCTCCTGACTGTGGAGCTAGGAAGATACCTGGACACCACCTTCATGCTATGGTTGGGTAAACTGAGGTTCGGAGAGGAGAGGCAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCAGAATGATGCCATCTTaGAGGCCGTCCATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCRMMPS*RPSMKL
Trigger: CAACTTCATGGACGGCCTCAAAGATGGCATCATTCT...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTACTTGGTGATGGCCTaGATGAAGTTGCCGATGTTC +
Preference number: 5 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRYLVMA*MKLPMF
Trigger: GAACATCGGCAACTTCATCAAGGCCATCACCAAGTA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCTACTTGGTGATGGCCTaGATGAAGTTGCCGATGTTC +
Preference number: 5 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCYLVMA*MKLPMF
Trigger: GAACATCGGCAACTTCATCAAGGCCATCACCAAGTA...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCAAACAAGTCTTCCCCCTaGTTCTTAACCTCGGCTGAC +
Preference number: 5 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPNKSSP*FLTSAD
Trigger: GTCAGCCGAGGTTAAGAACAAGGGGGAAGACTTGTT...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGCCTGGCTGCAGCTTATaGATGAATTCGCAAAGAATG +
Preference number: 5 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRPGCSL*MNSQRM
Trigger: CATTCTTTGCGAATTCATCAATAAGCTGCAGCCAGG...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGCCTGGCTGCAGCTTATaGATGAATTCGCAAAGAATG +
Preference number: 5 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRPGCSL*MNSQRM
Trigger: CATTCTTTGCGAATTCATCAATAAGCTGCAGCCAGG...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000592923.5
CDS-3UTR CAA 90 bp CCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATGCTTTTGGGTTGACTCATaGATCTTCTTCACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PNSNPVEVEFYRGWRMPCFWVDS*IFFTEP
Trigger: AGGCTCCGTGAAGAAGATCAATGAGTCAACCCAAAA...GCATGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CCCGCCAGTCTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGTTTTGGGTTGACTCATaGATCTTCTTCACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PASLLSPNSNPVEVEFYRFWVDS*IFFTEP
Trigger: AGGCTCCGTGAAGAAGATCAATGAGTCAACCCAAAA...CCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAGACTGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp CTGCTCTCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGTTTTGGGTTGACTCATaGATCTTCTTCACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LLSPNSNPVEVEFYRGWRFWVDS*IFFTEP
Trigger: AGGCTCCGTGAAGAAGATCAATGAGTCAACCCAAAA...CCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATACTTGGTGATGGCCTaGATGAAGTTGCCGATGTTC +
Preference number: 5 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPYLVMA*MKLPMF
Trigger: GAACATCGGCAACTTCATCAAGGCCATCACCAAGTA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS-3UTR CAA 90 bp TCTCCAAACTCTAACCCTGTAGAGGTTGAGTTCTACAGGGGCTGGAGGATGCCATTTTGGGTTGACTCATaGATCTTCTTCACGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SPNSNPVEVEFYRGWRMPFWVDS*IFFTEP
Trigger: AGGCTCCGTGAAGAAGATCAATGAGTCAACCCAAAA...TGGCATCCTCCAGCCCCTGTAGAACTCAACCTCTACAGGGTTAGAGTTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000587087.5
ENST00000592923.5
CDS CCA 72 bp CCCTGGCGCAGTCATGCCAGCCTGCGAAGGGTGGTGTaGTCAGGCCGTGGGGTGGCCAGGGTCCTGGGCCTT +
Preference number: 6 (lower is better)
Translates to: PWRSHASLRRVV*SGRGVARVLGL
Trigger: AAGGCCCAGGACCCTGGCCACCCCACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CCA 72 bp TGGTCGCCTGGTCCAGAGGCTGGTCTGTGCCCAGCTTaGGGTCGTAGAGGTGGCGCCGGGTGCCATAGGCCG +
Preference number: 6 (lower is better)
Translates to: WSPGPEAGLCPA*GRRGGAGCHRP
Trigger: CGGCCTATGGCACCCGGCGCCACCTCTACGACCCCAAGCTGGGCACAGACCAGCCTCTGGACCAGGCGACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000586577.1
ENST00000588935.1
ENST00000592923.5
CDS CCA 72 bp GCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTaGTCCCTGGCGCAGTCATGCCAGCCTGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: APCPAPARRSAA*SLAQSCQPGWL
Trigger: GAGCCAGCCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000588935.1
ENST00000592923.5
CDS CCA 72 bp TTGGTCCCTGGCGCAGTCATGCCAGCCTGCGAAGGGTaGTGTGGTCAGGCCGTGGGGTGGCCAGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LVPGAVMPACEG*CGQAVGWPGSW
Trigger: CCAGGACCCTGGCCACCCCACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CCA 72 bp GCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTaGCGCAGTCATGCCAGCCTGCGAAGGGTGGTGTGG +
Preference number: 6 (lower is better)
Translates to: AQPRLEDLPLGP*RSHASLRRVVW
Trigger: CCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS GCA 72 bp TCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: SQCSMPSPGSKI*RLVPGAVMPAW
Trigger: CCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000588935.1
ENST00000592923.5
CDS GCA 72 bp TCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTaGCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: SQCSMPSPGSKI*RLVPGAVMPAC
Trigger: GCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586577.1
ENST00000592338.5
CDS GCA 72 bp ATCTGCCGCTTGGTCCCTGGCGCAGTCATGCCAGCCTaGGAAGGGTGGTGTGGTCAGGCCGTGGGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: ICRLVPGAVMPA*EGWCGQAVGWP
Trigger: TGGCCACCCCACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CCA 72 bp GCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTaGTCCCTGGCGCAGTCATGCCAGCCTGCAGCCCAA +
Preference number: 6 (lower is better)
Translates to: APCPAPARRSAA*SLAQSCQPAAQ
Trigger: TTGGGCTGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592338.5
CDS CCA 72 bp GCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTTaGTCCCTGGCGCAGTCATGCCAGCCTGCGAAGGGT +
Preference number: 6 (lower is better)
Translates to: APCPAPARRSAA*SLAQSCQPAKG
Trigger: ACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CAA 72 bp TGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATGCCAGCCTGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: CSMPSPGSKICR*VPGAVMPAWLA
Trigger: AGCCAGCCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000588935.1
ENST00000592923.5
CDS CAA 72 bp TGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATGCCAGCCTGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: CSMPSPGSKICR*VPGAVMPACSP
Trigger: TGGGCTGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592338.5
CDS CAA 72 bp TGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATGCCAGCCTGCGAAGGG +
Preference number: 6 (lower is better)
Translates to: CSMPSPGSKICR*VPGAVMPACEG
Trigger: CCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CAA 90 bp GTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATGCCAGCCTGCGAAGGGTGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: VSQCSMPSPGSKICR*VPGAVMPACEGWCG
Trigger: ACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS GCA 72 bp GCTCGAAGATCTGCCGCTTGGTCCCTGGCGCAGTCATaGCAGCCTGCGAAGGGTGGTGTGGTCAGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: ARRSAAWSLAQS*QPAKGGVVRPW
Trigger: CCACGGCCTGACCACACCACCCTTCGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586577.1
CDS CCA 72 bp GCCCAGCCCCGGCTCGAAGATCTGCCGCTTGGTCCCTaGCGCAGTCATGCCAGCCTGCAGCCCAATGATGTT +
Preference number: 6 (lower is better)
Translates to: AQPRLEDLPLGP*RSHASLQPNDV
Trigger: AACATCATTGGGCTGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592338.5
CDS CAA 90 bp GTGTCGCAGTGCTCCATGCCCAGCCCCGGCTCGAAGATCTGCCGCTaGGTCCCTGGCGCAGTCATGCCAGCCTGCAGCCCAATGATGTTC +
Preference number: 6 (lower is better)
Translates to: VSQCSMPSPGSKICR*VPGAVMPACSPMMF
Trigger: GAACATCATTGGGCTGCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCACTGCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592338.5
CDS CCA 72 bp GCGCCAGCTCTGGGTACTCGGGAGTCAGACAGTACTTaGGGTCGTAGACCTGGCGTGGCAGCCCATACACCG +
Preference number: 6 (lower is better)
Translates to: APALGTRESDST*GRRPGVAAHTP
Trigger: CGGTGTATGGGCTGCCACGCCAGGTCTACGACCCCAAGTACTGTCTGACTCCCGAGTACCCAGAGCTGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588935.1
CDS GCA 72 bp CAGGAGACCCCTGCCGCACTTCTGATGCCCGCTTCCTaGCTTTCACCGTCCCCCTCTGTCTTCAGGATCTCC +
Preference number: 6 (lower is better)
Translates to: QETPAALLMPAS*LSPSPSVFRIS
Trigger: GGAGATCCTGAAGACAGAGGGGGACGGTGAAAGGCAGGAAGCGGGCATCAGAAGTGCGGCAGGGGTCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS GCA 72 bp CTGCCCATCTGCAGGCTGACATTGAGCGTGTCGCAGTaGTCCATGCCCAGCCCCGGCTCAAAAATGTCGTGG +
Preference number: 6 (lower is better)
Translates to: LPICRLTLSVSQ*SMPSPGSKMSW
Trigger: CCACGACATTTTTGAGCCGGGGCTGGGCATGGAGCACTGCGACACGCTCAATGTCAGCCTGCAGATGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587087.5
CDS CCA 72 bp TTTCTTGGCCCAGTCTTGGGTCCCCATCTCTCTAGGTaGCTAGTCCCTGTCTGGCCAGGGGTAGGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: FLGPVLGPHLSR*LVPVWPGVGLL
Trigger: CAGGAGCCCTACCCCTGGCCAGACAGGGACTAGCCACCTAGAGAGATGGGGACCCAAGACTGGGCCAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585869.1
CDS CCA 72 bp TCCTGCTCCCGCTGGTGGTCATACTTCTGGGCCAGCTaGGACCCCAGCTATTTGCCTCTCCTCTCCGAACCT +
Preference number: 6 (lower is better)
Translates to: SCSRWWSYFWAS*DPSYLPLLSEP
Trigger: AGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCAGCTGGCCCAGAAGTATGACCACCAGCGGGAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592923.5
CDS GCA 72 bp CCAGGTATCTTCCTAGCTCCACAGTCAGGAGACCCCTaGCGCACTTCTGATGCCCGCTTCCTGCCTTTCACC +
Preference number: 6 (lower is better)
Translates to: PGIFLAPQSGDP*RTSDARFLPFT
Trigger: GGTGAAAGGCAGGAAGCGGGCATCAGAAGTGCGGCAGGGGTCTCCTGACTGTGGAGCTAGGAAGATACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS GCA 72 bp TCCTGCTCCCGCTGGTGGTCATACTTCTGGGCCAGCTaGTTTACCTGGGACCCCAGCTATTTGCCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: SCSRWWSYFWAS*FTWDPSYLPLL
Trigger: GAGGAGAGGCAAATAGCTGGGGTCCCAGGTAAAGCAGCTGGCCCAGAAGTATGACCACCAGCGGGAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS CCA 72 bp CGCTGGTGGTCATACTTCTGGGCCAGCTGCTTTACCTaGGACCCCAGCTATTTGCCTCTCCTCTCCGAACCT +
Preference number: 6 (lower is better)
Translates to: RWWSYFWASCFT*DPSYLPLLSEP
Trigger: AGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCAGGTAAAGCAGCTGGCCCAGAAGTATGACCACCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS CCA 72 bp TCTCTCAGCTCCTGCTCCCGCTGGTGGTCATACTTCTaGGCCAGCTGCTTTACCTGGGACCCCAGCTATTTG +
Preference number: 6 (lower is better)
Translates to: SLSSCSRWWSYF*ASCFTWDPSYL
Trigger: CAAATAGCTGGGGTCCCAGGTAAAGCAGCTGGCCCAGAAGTATGACCACCAGCGGGAGCAGGAGCTGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS CAA 72 bp AGTTCCGTCTGCACACTCTTCCCTCCTCACATGTTTTaGAAGCTCCGGAGGCGACCCGGGTCTCTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: SSVCTLFPPHMF*KLRRRPGSLPG
Trigger: CCCTGGAAGAGACCCGGGTCGCCTCCGGAGCTTCAAAAACATGTGAGGAGGGAAGAGTGTGCAGACGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS GCA 72 bp GTCTTCGCCATGCTGGCCAAAGCCAGGAGGGTGGACTaGACCTGTGTATGGTTGGTGTTCTCAAACAGGTCG +
Preference number: 6 (lower is better)
Translates to: VFAMLAKARRVD*TCVWLVFSNRS
Trigger: CGACCTGTTTGAGAACACCAACCATACACAGGTGCAGTCCACCCTCCTGGCTTTGGCCAGCATGGCGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000586059.5
ENST00000586577.1
ENST00000592338.5
ENST00000592923.5
CDS GCA 72 bp CCTTCTCTTAGCTTCCCCGGCTCGAATTTCCGCTCCTaGTTCTCTGCGTACTTCACTCCCACGTTCACCTTG +
Preference number: 6 (lower is better)
Translates to: PSLSFPGSNFRS*FSAYFTPTFTL
Trigger: CAAGGTGAACGTGGGAGTGAAGTACGCAGAGAAGCAGGAGCGGAAATTCGAGCCGGGGAAGCTAAGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000586059.5
ENST00000586577.1
ENST00000592338.5
ENST00000592923.5
CDS GCA 72 bp TCTGGGCCAGCTGCTTTACCTGGGACCCCAGCTATTTaGCTCTCCTCTCCGAACCTCAGTTTACCCAACCAT +
Preference number: 6 (lower is better)
Translates to: SGPAALPGTPAI*LSSPNLSLPNH
Trigger: ATGGTTGGGTAAACTGAGGTTCGGAGAGGAGAGGCAAATAGCTGGGGTCCCAGGTAAAGCAGCTGGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535659.6
CDS CAA 72 bp CAAAGAATGATGCCATCTTTGAGGCCGTCCATGAAGTaGTTGCCGATGCGACGGCCTGTCACCCCCTCGATC +
Preference number: 6 (lower is better)
Translates to: QRMMPSLRPSMK*LPMRRPVTPSI
Trigger: GATCGAGGGGGTGACAGGCCGTCGCATCGGCAACAACTTCATGGACGGCCTCAAAGATGGCATCATTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000586059.5
ENST00000588468.1
ENST00000592923.5
CDS TCA 72 bp TCTCCTCTCCGAACCTCAGTTTACCCAACCATAGCATaGAGGTGGTGTCCAGGTATCTTCCTAGCTCCACAG +
Preference number: 6 (lower is better)
Translates to: SPLRTSVYPTIA*RWCPGIFLAPQ
Trigger: CTGTGGAGCTAGGAAGATACCTGGACACCACCTTCATGCTATGGTTGGGTAAACTGAGGTTCGGAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535659.6
ENST00000592923.5
CDS CAA 72 bp GAAACTCCATCTCTATCGCAAAGAATGATGCCATCTTaGAGGCCGTCCATGAAGTTGTTGCCGATGCGACGG +
Preference number: 6 (lower is better)
Translates to: ETPSLSQRMMPS*RPSMKLLPMRR
Trigger: CCGTCGCATCGGCAACAACTTCATGGACGGCCTCAAAGATGGCATCATTCTTTGCGATAGAGATGGAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588468.1
CDS CAA 72 bp AGCTTATTGATGAATTCGCAAAGAATGATGCCATCTTaGAGGCCGTCCATGAAGTTGTTGCCGATGCGACGG +
Preference number: 6 (lower is better)
Translates to: SLLMNSQRMMPS*RPSMKLLPMRR
Trigger: CCGTCGCATCGGCAACAACTTCATGGACGGCCTCAAAGATGGCATCATTCTTTGCGAATTCATCAATAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000586059.5
ENST00000592923.5
CDS GCA 72 bp TGGGTTGACTCATTGATCTTCTTCACGGAGCCTGGCTaGAGCTTATTGATGAATTCGCAAAGAATGATGCCA +
Preference number: 6 (lower is better)
Translates to: WVDSLIFFTEPG*SLLMNSQRMMP
Trigger: TGGCATCATTCTTTGCGAATTCATCAATAAGCTGCAGCCAGGCTCCGTGAAGAAGATCAATGAGTCAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252456.7
ENST00000535659.6
ENST00000586059.5
ENST00000592923.5