Pregenerated sensors for CNMD (Homo sapiens)
Ensembl gene IDs: ENSG00000136110Ensembl transcript IDs: ENST00000377962.8, ENST00000431550.1, ENST00000448904.6
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTaGTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: RVSRITAQVECKNIL*SYQHQPALMLLWLS Trigger: AGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGACCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| 3UTR CCA 90 bp | AATATTTTGTGGTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTaGTTGTCTCTTCAGCTAGTTCTTATTTTACAGCACATGATATAT | + |
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Preference number: 1 (lower is better) Translates to: NILWSYQHQPALMLL*LSLQLVLILQHMIY Trigger: ATATATCATGTGCTGTAAAATAAGAACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGACCACAAAATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| 3UTR CAA 90 bp | TTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTaGTGGTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: LRVSRITAQVECKNI*WSYQHQPALMLLWL Trigger: CAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGACCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCTATCAGCATCAACCTaGCTTAATGCTTCTTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LLRVSRITAQVECKNILWLSAST*LNASLV Trigger: AACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTCTATCAGCATCAACCTaGCTTAATGCTTCTTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: RGYGILDLNYPFSTFAYTLSAST*LNASLV Trigger: AACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAG...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGGCCTTAATGCTTCTTTaGTTGTCTCTTCAGCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: LLRVSRITAQVECKNILWALMLL*LSLQLV Trigger: AACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGC...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTTGCCTTAATGCTTCTTaGGTTGTCTCTTCAGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: RGYGILDLNYPFSTFAYTCLNAS*VVSSAS Trigger: ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCA...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTTTAATGCTTCTTTGGTaGTCTCTTCAGCTAGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: RGYGILDLNYPFSTFAYTLMLLW*SLQLVL Trigger: AAGAACTAGCTGAAGAGACAACCAAAGAAGCATTAA...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTCCACGGCTCCCACCTTaGGCAGCCGCGCGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASPRLPP*AAARGW Trigger: CCAGCCCCGCGCGGCTGCTCAAGGTGGGAGCCGTGG...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTCCCGCTGCCCCGACGTaGAGGGCATTTCAACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASPAAPT*RAFQRR Trigger: GCGGCGTTGAAATGCCCTGCACGTCGGGGCAGCGGG...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTCCACGGCTCCCACCTTaGGCAGCCGCGCGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTPRLPP*AAARGW Trigger: CCAGCCCCGCGCGGCTGCTCAAGGTGGGAGCCGTGG...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTTTGCGGCGGGAGGAGTaGGGCACTTGGAGACTCCCT | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASLRREE*GTWRLP Trigger: AGGGAGTCTCCAAGTGCCTCACTCCTCCCGCCGCAA...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTGCACAGCTCCCGAAATaGGGACCACGGCTCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASAQLPK*GPRLPP Trigger: AGGTGGGAGCCGTGGTCCTCATTTCGGGAGCTGTGC...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTTGGGATCTGTCCCGCTaGCCCGACGTGCAGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASWDLSR*PDVQGI Trigger: AATGCCCTGCACGTCGGGGCAGCGGGACAGATCCCA...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGGCAGCCGCGCGGGGCTaGAGGGCTTCACCGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWAAARG*RASPSA Trigger: CGCTGACGGTGAAGCCCTCCAGCCCCGCGCGGCTGC...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGGCAGCCGCGCGGGGCTaGAGGGCTTCACCGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLAAARG*RASPSA Trigger: CGCTGACGGTGAAGCCCTCCAGCCCCGCGCGGCTGC...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGACTCCCTGGGCACCCTaGGATCTGTCCCGCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWTPWAP*DLSRCP Trigger: GGGGCAGCGGGACAGATCCCAGGGTGCCCAGGGAGT...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTAGGAGATGCTCTGTTTaGTCACGGCGCCCACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASRRCSV*SRRPPQ Trigger: CTGAGGTGGGCGCCGTGACCAAACAGAGCATCTCCT...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGCCCGCTGCCCCGACGTaGAGGGCATTTCAACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLPAAPT*RAFQRR Trigger: GCGGCGTTGAAATGCCCTGCACGTCGGGGCAGCGGG...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGACTCCCTGGGCACCCTaGGATCTGTCCCGCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLTPWAP*DLSRCP Trigger: GGGGCAGCGGGACAGATCCCAGGGTGCCCAGGGAGT...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTCACCCACCAGCTACATaGCATGATGACTCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASHPPAT*HDDSAG Trigger: GCCTGCAGAGTCATCATGCCATGTAGCTGGTGGGTG...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTTTGCGGCGGGAGGAGTaGGGCACTTGGAGACTCCCT | + |
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Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTLRREE*GTWRLP Trigger: AGGGAGTCTCCAAGTGCCTCACTCCTCCCGCCGCAA...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTTGGGATCTGTCCCGCTaGCCCGACGTGCAGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTWDLSR*PDVQGI Trigger: AATGCCCTGCACGTCGGGGCAGCGGGACAGATCCCA...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTAGTGATTTCACACCATaGCCAAGATACGGGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASSDFTP*PRYGPP Trigger: GGGTGGCCCGTATCTTGGGCATGGTGTGAAATCACT...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTTTGTCCTTCACAGGCTaGTCTACAGCCACCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASLSFTG*STATQI Trigger: TATCTGGGTGGCTGTAGATCAGCCTGTGAAGGACAA...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTTTCCAGCGCCTGGGTTaGTCCGTGGTCCACTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTFQRLG*SVVHCV Trigger: CACACAGTGGACCACGGAGCAACCCAGGCGCTGGAA...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCACTTGGAGACTCCCTaGGCACCCTGGGATCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWHLETP*APWDLS Trigger: GGACAGATCCCAGGGTGCCCAGGGAGTCTCCAAGTG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTCCGTGGTCCACTGTGTaGTCTTTTTGTGGTAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASPWSTV*SFCGSW Trigger: CCAACTACCACAAAAAGACCACACAGTGGACCACGG...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCAGTCTTCCAGCGCCTaGGTTGCTCCGTGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWQSSSA*VAPWST Trigger: AGTGGACCACGGAGCAACCCAGGCGCTGGAAGACTG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTCAACAGATTCCTTCGTaGTCCAGTCTAGGGTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASQQIPS*SSLGSN Trigger: ATTCGACCCTAGACTGGATCACGAAGGAATCTGTTG...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGTTCCAGCGCCTGGGTTaGTCCGTGGTCCACTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLFQRLG*SVVHCV Trigger: CACACAGTGGACCACGGAGCAACCCAGGCGCTGGAA...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGCACTTGGAGACTCCCTaGGCACCCTGGGATCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLHLETP*APWDLS Trigger: GGACAGATCCCAGGGTGCCCAGGGAGTCTCCAAGTG...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAGTAGAAGGCCCCGATaGCCCCAAAGAGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTSRRPR*PQRAAA Trigger: TGCTGCTGCTCTTTGGGGCCATCGGGGCCTTCTACT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGCAGTCTTCCAGCGCCTaGGTTGCTCCGTGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLQSSSA*VAPWST Trigger: AGTGGACCACGGAGCAACCCAGGCGCTGGAAGACTG...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGGTTCTCTGTCATGTTTaGGGCGGGAGGAGTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWVLCHV*GGRSEA Trigger: TGCCTCACTCCTCCCGCCGCAAACATGACAGAGAAC...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTCCAGTTTGGAGGAGATaGTCTGTTTGGTCACGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTPVWRR*SVWSRR Trigger: GCGCCGTGACCAAACAGAGCATCTCCTCCAAACTGG...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR GCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCCAGTTTGGAGGAGATaGTCTGTTTGGTCACGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWPVWRR*SVWSRR Trigger: GCGCCGTGACCAAACAGAGCATCTCCTCCAAACTGG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGAGTAGAAGGCCCCGATaGCCCCAAAGAGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLSRRPR*PQRAAA Trigger: TGCTGCTGCTCTTTGGGGCCATCGGGGCCTTCTACT...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGGCCTGGGTTGCTCCGTaGTCCACTGTGTGGTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWAWVAP*STVWSF Trigger: AAAAGACCACACAGTGGACCACGGAGCAACCCAGGC...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCACCCACCAGCTACATaGCATGATGACTCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWHPPAT*HDDSAG Trigger: GCCTGCAGAGTCATCATGCCATGTAGCTGGTGGGTG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTTTGTCCTTCACAGGCTaGTCTACAGCCACCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTLSFTG*STATQI Trigger: TATCTGGGTGGCTGTAGATCAGCCTGTGAAGGACAA...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGGCTTGTGAGTCCTCTTaGACACTGGGTCTGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWACESS*TLGLVS Trigger: TGAAACCAGACCCAGTGTTCAAGAGGACTCACAAGC...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTGCTTGTGAGTCCTCTTaGACACTGGGTCTGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTACESS*TLGLVS Trigger: TGAAACCAGACCCAGTGTTCAAGAGGACTCACAAGC...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTACAGCACATGATATATaGAGTGATTTCACACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASTAHDI*SDFTPC Trigger: GCATGGTGTGAAATCACTTCATATATCATGTGCTGT...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR GCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTATCATTAACTGCAATTaGTTCTTCAGCTCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASIINCN*FFSSTS Trigger: GGAAGTGGAGCTGAAGAAGCAATTGCAGTTAATGAT...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR GCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGAGTGATTTCACACCATaGCCAAGATACGGGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLSDFTP*PRYGPP Trigger: GGGTGGCCCGTATCTTGGGCATGGTGTGAAATCACT...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR GCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTCTATCAGCATCAACCTaGCTTAATGCTTCTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASLSAST*LNASLV Trigger: AACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAG...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGGTCCCACCAGGGCAATaGGAACTTTGTCGGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLVPPGQ*ELCRSS Trigger: AGAACTCCGACAAAGTTCCCATTGCCCTGGTGGGAC...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTTTCTTCATATTTGACTaGCATGATCTTGCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASFFIFD*HDLAFQ Trigger: CTGGAAGGCAAGATCATGCCAGTCAAATATGAAGAA...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCCGTGGTCCACTGTGTaGTCTTTTTGTGGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWPWSTV*SFCGSW Trigger: CCAACTACCACAAAAAGACCACACAGTGGACCACGG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTGCCTTAATGCTTCTTTaGTTGTCTCTTCAGCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLSASTCLNASLVVSSASALMLL*LSLQLV Trigger: AACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGC...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR TCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTCAACAGATTCCTTCGTaGTCCAGTCTAGGGTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTQQIPS*SSLGSN Trigger: ATTCGACCCTAGACTGGATCACGAAGGAATCTGTTG...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTTCTTGCCTTCCAGTTTaGAGGAGATGCTCTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTSCLPV*RRCSVW Trigger: CCAAACAGAGCATCTCCTCCAAACTGGAAGGCAAGA...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGTCTTGCCTTCCAGTTTaGAGGAGATGCTCTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLSCLPV*RRCSVW Trigger: CCAAACAGAGCATCTCCTCCAAACTGGAAGGCAAGA...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| 3UTR CAA 72 bp | TCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTaGTCTCTTCAGCTAGTTCTTATTTTACAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: SYQHQPALMLLW*SLQLVLILQHM Trigger: CATGTGCTGTAAAATAAGAACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR TCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGAAGGATTATCAGGATTaGAGGCTTGTGAGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWKDYQD*RLVSPL Trigger: AAGAGGACTCACAAGCCTTCAATCCTGATAATCCTT...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR TCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAGGATTATCAGGATTaGAGGCTTGTGAGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTKDYQD*RLVSPL Trigger: AAGAGGACTCACAAGCCTTCAATCCTGATAATCCTT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| 3UTR CAA 72 bp | TCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTaGTGGTCCTATCAGCATCAACCTGCCTTAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRITAQVECKNI*WSYQHQPALML Trigger: AAGCATTAAGGCAGGTTGATGCTGATAGGACCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR TCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTCAAAACGAATTCCTGTaGTGCCATTCTGGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTQNEFL*CHSGNH Trigger: ATGATTTCCAGAATGGCATCACAGGAATTCGTTTTG...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR TCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTACAGCACATGATATATaGAGTGATTTCACACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTTAHDI*SDFTPC Trigger: GCATGGTGTGAAATCACTTCATATATCATGTGCTGT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR GCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTATCATTAACTGCAATTaGTTCTTCAGCTCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTIINCN*FFSSTS Trigger: GGAAGTGGAGCTGAAGAAGCAATTGCAGTTAATGAT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCCTCTGGATTTCTTTTaGATAGGTTGGTTTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWPLDFF*IGWFKP Trigger: TGGCTTAAACCAACCTATCCAAAAGAAATCCAGAGG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCTTGAACACTGGGTCTaGTTTCATTATTCAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWLEHWV*FHYSVF Trigger: GAAGACTGAATAATGAAACCAGACCCAGTGTTCAAG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTCTTGAACACTGGGTCTaGTTTCATTATTCAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTLEHWV*FHYSVF Trigger: GAAGACTGAATAATGAAACCAGACCCAGTGTTCAAG...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAGTCCTCTTGAACACTaGGTCTGGTTTCATTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTSPLEH*VWFHYS Trigger: TGAATAATGAAACCAGACCCAGTGTTCAAGAGGACT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR TCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCTTGTAATTTCCCATTaGTACTCATGGTGTAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWLVISH*YSWCNG Trigger: TCCATTACACCATGAGTATCAATGGGAAATTACAAG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR TCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGCAAAACGAATTCCTGTaGTGCCATTCTGGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLQNEFL*CHSGNH Trigger: ATGATTTCCAGAATGGCATCACAGGAATTCGTTTTG...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTCCTGTGATGCCATTCTaGAAATCATTAACTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTPVMPF*KSLTAI Trigger: AATTGCAGTTAATGATTTCCAGAATGGCATCACAGG...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTGCAAGGGAAGACTTATaGCAAAGCAATGCAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGYGILDLNYPFSTFAYTAREDL*QSNANK Trigger: TTTATTTGCATTGCTTTGCCATAAGTCTTCCCTTGC...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGCCTGTGATGCCATTCTaGAAATCATTAACTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLPVMPF*KSLTAI Trigger: AATTGCAGTTAATGATTTCCAGAATGGCATCACAGG...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CCA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGTTCTTTTGGATAGGTTaGTTTAAGCCAGAAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRVSRITAQVECKNILWFFWIG*FKPENR Trigger: CCTATTTTCTGGCTTAAACCAACCTATCCAAAAGAA...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CCA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGTTCTTTTGGATAGGTTaGTTTAAGCCAGAAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GILDLNYPFSTFAYTKVLFFWIG*FKPENR Trigger: CCTATTTTCTGGCTTAAACCAACCTATCCAAAAGAA...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS GCA 90 bp | TGGAGACTCCCTGGGCACCCTGGGATCTGTCCCGCTGCCCCGACGTaGAGGGCATTTCAACGCCGCGCGCACACACGGTGCACGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: WRLPGHPGICPAAPT*RAFQRRAHTRCTVP Trigger: CGGGACCGTGCACCGTGTGTGCGCGCGGCGTTGAAATGCCCTGCACGTCGGGGCAGCGGGACAGATCCCAGGGTGCCCAGGGAGTCTCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377962.8 |
||
| CDS GCA 90 bp | GTGAGGCACTTGGAGACTCCCTGGGCACCCTGGGATCTGTCCCGCTaGCCCGACGTGCAGGGCATTTCAACGCCGCGCGCACACACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRHLETPWAPWDLSR*PDVQGISTPRAHTV Trigger: CACCGTGTGTGCGCGCGGCGTTGAAATGCCCTGCACGTCGGGGCAGCGGGACAGATCCCAGGGTGCCCAGGGAGTCTCCAAGTGCCTCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS CCA 90 bp | TCTGTCATGTTTGCGGCGGGAGGAGTGAGGCACTTGGAGACTCCCTaGGCACCCTGGGATCTGTCCCGCTGCCCCGACGTGCAGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SVMFAAGGVRHLETP*APWDLSRCPDVQGI Trigger: AATGCCCTGCACGTCGGGGCAGCGGGACAGATCCCAGGGTGCCCAGGGAGTCTCCAAGTGCCTCACTCCTCCCGCCGCAAACATGACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS TCA 90 bp | TGGGAACTTTGTCGGAGTTCTCTGTCATGTTTGCGGCGGGAGGAGTaGGGCACTTGGAGACTCCCTGGGCACCCTGGGATCTGTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: WELCRSSLSCLRREE*GTWRLPGHPGICPA Trigger: AGCGGGACAGATCCCAGGGTGCCCAGGGAGTCTCCAAGTGCCTCACTCCTCCCGCCGCAAACATGACAGAGAACTCCGACAAAGTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTACCACGGCTCCCACCTaGAGCAGCCGCGCGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLSASTCLNASLVVSSASTTAPT*SSRAGL Trigger: CAGCCCCGCGCGGCTGCTCAAGGTGGGAGCCGTGGT...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CAA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTACCACGGCTCCCACCTaGAGCAGCCGCGCGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGYGILDLNYPFSTFAYTTTAPT*SSRAGL Trigger: CAGCCCCGCGCGGCTGCTCAAGGTGGGAGCCGTGGT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS CCA 90 bp | CTCTTGAACACTGGGTCTGGTTTCATTATTCAGTCTTCCAGCGCCTaGGTTGCTCCGTGGTCCACTGTGTGGTCTTTTTGTGGTAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLNTGSGFIIQSSSA*VAPWSTVWSFCGSW Trigger: CCAACTACCACAAAAAGACCACACAGTGGACCACGGAGCAACCCAGGCGCTGGAAGACTGAATAATGAAACCAGACCCAGTGTTCAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS CCA 90 bp | GGGTCTGGTTTCATTATTCAGTCTTCCAGCGCCTGGGTTGCTCCGTaGTCCACTGTGTGGTCTTTTTGTGGTAGTTGGAACAATTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGFIIQSSSAWVAP*STVWSFCGSWNNFS Trigger: AGAAAAATTGTTCCAACTACCACAAAAAGACCACACAGTGGACCACGGAGCAACCCAGGCGCTGGAAGACTGAATAATGAAACCAGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTAGGGCAATGGGAACTTaGTCGGAGTTCTCTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: VLSASTCLNASLVVSSASRAMGT*SEFSVM Trigger: CATGACAGAGAACTCCGACAAAGTTCCCATTGCCCT...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CAA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGGAGGAGATGCTCTGTTaGGTCACGGCGCCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLRVSRITAQVECKNILWEEMLC*VTAPTS Trigger: TGAGGTGGGCGCCGTGACCAAACAGAGCATCTCCTC...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CAA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGCTTCCAGCGCCTGGGTaGCTCCGTGGTCCACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GILDLNYPFSTFAYTKVLLPAPG*LRGPLC Trigger: ACACAGTGGACCACGGAGCAACCCAGGCGCTGGAAG...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CAA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGGAGGAGATGCTCTGTTaGGTCACGGCGCCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GILDLNYPFSTFAYTKVLEEMLC*VTAPTS Trigger: TGAGGTGGGCGCCGTGACCAAACAGAGCATCTCCTC...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTTTAAAGGTCTCCAAGTaGTTCCCAGCGTCTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSASTCLNASLVVSSASLKVSK*FPASIS Trigger: GGAAATAGACGCTGGGAACAACTTGGAGACCTTTAA...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CAA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTGGCCGAACGGCAGCCTaGATAATTATAAGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RGYGILDLNYPFSTFAYTGRTAA*IIIRPW Trigger: CCATGGCCTTATAATTATCAAGGCTGCCGTTCGGCC...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTTGCCTTAATGCTTCTTaGGTTGTCTCTTCAGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLSASTCLNASLVVSSASCLNAS*VVSSAS Trigger: ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCA...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
||
| CDS TCA 90 bp | TGTTCCCAGCGTCTATTTCCATTGACCCATCTTGTAATTTCCCATTaGTACTCATGGTGTAATGGACATTGTAAATGTGACTGTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSQRLFPLTHLVISH*YSWCNGHCKCDCRS Trigger: GGAGCGACAGTCACATTTACAATGTCCATTACACCATGAGTATCAATGGGAAATTACAAGATGGGTCAATGGAAATAGACGCTGGGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGTTGACTGGCATGATCTaGCCTTCCAGTTTGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LLRVSRITAQVECKNILWLTGMI*PSSLEE Trigger: CTCCTCCAAACTGGAAGGCAAGATCATGCCAGTCAA...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTTTGACTGGCATGATCTaGCCTTCCAGTTTGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: RGYGILDLNYPFSTFAYTLTGMI*PSSLEE Trigger: CTCCTCCAAACTGGAAGGCAAGATCATGCCAGTCAA...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGGGCCGAACGGCAGCCTaGATAATTATAAGGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: GILDLNYPFSTFAYTKVLGRTAA*IIIRPW Trigger: CCATGGCCTTATAATTATCAAGGCTGCCGTTCGGCC...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGAGGGCAATGGGAACTTaGTCGGAGTTCTCTGTCATG | + |
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Preference number: 5 (lower is better) Translates to: GILDLNYPFSTFAYTKVLRAMGT*SEFSVM Trigger: CATGACAGAGAACTCCGACAAAGTTCCCATTGCCCT...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGATCTTGCCTTCCAGTTaGGAGGAGATGCTCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: LLRVSRITAQVECKNILWILPSS*EEMLCL Trigger: CAAACAGAGCATCTCCTCCAAACTGGAAGGCAAGAT...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTATCTTGCCTTCCAGTTaGGAGGAGATGCTCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: RGYGILDLNYPFSTFAYTILPSS*EEMLCL Trigger: CAAACAGAGCATCTCCTCCAAACTGGAAGGCAAGAT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTTTAATGCTTCTTTGGTaGTCTCTTCAGCTAGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VLSASTCLNASLVVSSASLMLLW*SLQLVL Trigger: AAGAACTAGCTGAAGAGACAACCAAAGAAGCATTAA...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTACCCTTTCAGTACATTaGCATATACTAAAGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VLSASTCLNASLVVSSASTLSVH*HILKFW Trigger: CCAGAACTTTAGTATATGCAAATGTACTGAAAGGGT...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | GTCCTATCAGCATCAACCTGCCTTAATGCTTCTTTGGTTGTCTCTTCAGCTAGTTATGGCATTTTAGACTaGAACTACCCTTTCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: VLSASTCLNASLVVSSASYGILD*NYPFST Trigger: TGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATA...ACTAGCTGAAGAGACAACCAAAGAAGCATTAAGGCAGGTTGATGCTGATAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS TCA 90 bp | AGTTCTAACACCTTAGAACTCAAGAAGCTGTTGTCCTTCACAGGCTaGTCTACAGCCACCCAGATAAGAGAATTTTCTTCATATTTGACT | + |
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Preference number: 5 (lower is better) Translates to: SSNTLELKKLLSFTG*STATQIREFSSYLT Trigger: AGTCAAATATGAAGAAAATTCTCTTATCTGGGTGGCTGTAGATCAGCCTGTGAAGGACAACAGCTTCTTGAGTTCTAAGGTGTTAGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGTTAAAGGTCTCCAAGTaGTTCCCAGCGTCTATTTCC | + |
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Preference number: 5 (lower is better) Translates to: LLRVSRITAQVECKNILWLKVSK*FPASIS Trigger: GGAAATAGACGCTGGGAACAACTTGGAGACCTTTAA...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | CTGTTAAGAGTGTCAAGAATAACCGCTCAGGTTGAGTGTAAAAATATTTTGTGGCAGCGTCTATTTCCATaGACCCATCTTGTAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: LLRVSRITAQVECKNILWQRLFP*THLVIS Trigger: GGAAATTACAAGATGGGTCAATGGAAATAGACGCTG...CCACAAAATATTTTTACACTCAACCTGAGCGGTTATTCTTGACACTCTTAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAATACGAGCCTTCACTaGCGCTTTAATGTAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: RGYGILDLNYPFSTFAYTNTSLH*RFNVAL Trigger: AAGTGCTACATTAAAGCGCAAGTGAAGGCTCGTATT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | AGGGGTTATGGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTACCCTTTCAGTACATTaGCATATACTAAAGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGYGILDLNYPFSTFAYTTLSVH*HILKFW Trigger: CCAGAACTTTAGTATATGCAAATGTACTGAAAGGGT...AGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATAACCCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS-3UTR CAA 90 bp | GGCATTTTAGACTTGAACTACCCTTTCAGTACATTTGCATATACTAAAGTTCTGTATGGCATTTTAGACTaGAACTACCCTTTCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: GILDLNYPFSTFAYTKVLYGILD*NYPFST Trigger: TGTACTGAAAGGGTAGTTCAAGTCTAAAATGCCATA...CAGAACTTTAGTATATGCAAATGTACTGAAAGGGTAGTTCAAGTCTAAAATGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS CCA 72 bp | AGCGCACCCGGGCCCCACGCGGTAGCCCCCAGGGAGTaGGGAGTCGGGCGGGAAACAGCTCGCCCGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SAPGPHAVAPRE*GVGRETARPGS Trigger: GGAGCCCGGGCGAGCTGTTTCCCGCCCGACTCCCCACTCCCTGGGGGCTACCGCGTGGGGCCCGGGTGCGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000431550.1 |
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| CDS GCA 72 bp | GTCGGGCGGGAAACAGCTCGCCCGGGCTCCTACGGGTaGCCCTTTCGCCGCGCTCCCTCCCGAGGGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: VGRETARPGSYG*PFRRAPSRGSF Trigger: AAAGGACCCTCGGGAGGGAGCGCGGCGAAAGGGGCACCCGTAGGAGCCCGGGCGAGCTGTTTCCCGCCCGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431550.1 |
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| CDS GCA 72 bp | CCTGGGCACCCTGGGATCTGTCCCGCTGCCCCGACGTaGAGGGCATTTCAACGCCGCGCGCACACACGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PGHPGICPAAPT*RAFQRRAHTRC Trigger: GCACCGTGTGTGCGCGCGGCGTTGAAATGCCCTGCACGTCGGGGCAGCGGGACAGATCCCAGGGTGCCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS GCA 72 bp | TTGGAGACTCCCTGGGCACCCTGGGATCTGTCCCGCTaGCCCGACGTGCAGGGCATTTCAACGCCGCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: LETPWAPWDLSR*PDVQGISTPRA Trigger: TGCGCGCGGCGTTGAAATGCCCTGCACGTCGGGGCAGCGGGACAGATCCCAGGGTGCCCAGGGAGTCTCCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS CAA 90 bp | TTGTCGGAGTTCTCTGTCATGTTTGCGGCGGGAGGAGTGAGGCACTaGGAGACTCCCTGGGCACCCTGGGATCTGTCCCGCTGCCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: LSEFSVMFAAGGVRH*ETPWAPWDLSRCPD Trigger: GTCGGGGCAGCGGGACAGATCCCAGGGTGCCCAGGGAGTCTCCAAGTGCCTCACTCCTCCCGCCGCAAACATGACAGAGAACTCCGACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS TCA 72 bp | TGTCGGAGTTCTCTGTCATGTTTGCGGCGGGAGGAGTaGGGCACTTGGAGACTCCCTGGGCACCCTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: CRSSLSCLRREE*GTWRLPGHPGI Trigger: GATCCCAGGGTGCCCAGGGAGTCTCCAAGTGCCTCACTCCTCCCGCCGCAAACATGACAGAGAACTCCGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS CAA 90 bp | CTGCAGAATTCCACGTCATCAGGTCCCACCAGGGCAATGGGAACTTaGTCGGAGTTCTCTGTCATGTTTGCGGCGGGAGGAGTGAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LQNSTSSGPTRAMGT*SEFSVMFAAGGVRH Trigger: GTGCCTCACTCCTCCCGCCGCAAACATGACAGAGAACTCCGACAAAGTTCCCATTGCCCTGGTGGGACCTGATGACGTGGAATTCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS CAA 72 bp | TCCACGTCATCAGGTCCCACCAGGGCAATGGGAACTTaGTCGGAGTTCTCTGTCATGTTTGCGGCGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: STSSGPTRAMGT*SEFSVMFAAGG Trigger: TCCTCCCGCCGCAAACATGACAGAGAACTCCGACAAAGTTCCCATTGCCCTGGTGGGACCTGATGACGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS CAA 90 bp | TTGACTGGCATGATCTTGCCTTCCAGTTTGGAGGAGATGCTCTGTTaGGTCACGGCGCCCACCTCAGGAATACGAGCCTTCACTTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: LTGMILPSSLEEMLC*VTAPTSGIRAFTCA Trigger: AGCGCAAGTGAAGGCTCGTATTCCTGAGGTGGGCGCCGTGACCAAACAGAGCATCTCCTCCAAACTGGAAGGCAAGATCATGCCAGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS CAA 72 bp | GGTCACGGCGCCCACCTCAGGAATACGAGCCTTCACTaGCGCTTTAATGTAGCACTTCTCTCCTCCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GHGAHLRNTSLH*RFNVALLSSSK Trigger: TTTGCTGGAGGAGAGAAGTGCTACATTAAAGCGCAAGTGAAGGCTCGTATTCCTGAGGTGGGCGCCGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS CAA 72 bp | ATGATCTTGCCTTCCAGTTTGGAGGAGATGCTCTGTTaGGTCACGGCGCCCACCTCAGGAATACGAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: MILPSSLEEMLC*VTAPTSGIRAF Trigger: GAAGGCTCGTATTCCTGAGGTGGGCGCCGTGACCAAACAGAGCATCTCCTCCAAACTGGAAGGCAAGATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS CCA 72 bp | TGCAGAATTCCACGTCATCAGGTCCCACCAGGGCAATaGGAACTTTGTCGGAGTTCTCTGTCATGTTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: CRIPRHQVPPGQ*ELCRSSLSCLR Trigger: CCGCAAACATGACAGAGAACTCCGACAAAGTTCCCATTGCCCTGGTGGGACCTGATGACGTGGAATTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS CAA 90 bp | GCTCTGTTTGGTCACGGCGCCCACCTCAGGAATACGAGCCTTCACTaGCGCTTTAATGTAGCACTTCTCTCCTCCAGCAAAACGAATTCC | + |
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Preference number: 6 (lower is better) Translates to: ALFGHGAHLRNTSLH*RFNVALLSSSKTNS Trigger: GGAATTCGTTTTGCTGGAGGAGAGAAGTGCTACATTAAAGCGCAAGTGAAGGCTCGTATTCCTGAGGTGGGCGCCGTGACCAAACAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS CCA 72 bp | ACTGGGTCTGGTTTCATTATTCAGTCTTCCAGCGCCTaGGTTGCTCCGTGGTCCACTGTGTGGTCTTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: TGSGFIIQSSSA*VAPWSTVWSFC Trigger: ACAAAAAGACCACACAGTGGACCACGGAGCAACCCAGGCGCTGGAAGACTGAATAATGAAACCAGACCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS CAA 72 bp | GGTCTGGTTTCATTATTCAGTCTTCCAGCGCCTGGGTaGCTCCGTGGTCCACTGTGTGGTCTTTTTGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GLVSLFSLPAPG*LRGPLCGLFVV Trigger: TACCACAAAAAGACCACACAGTGGACCACGGAGCAACCCAGGCGCTGGAAGACTGAATAATGAAACCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS CCA 72 bp | TTCATTATTCAGTCTTCCAGCGCCTGGGTTGCTCCGTaGTCCACTGTGTGGTCTTTTTGTGGTAGTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FIIQSSSAWVAP*STVWSFCGSWN Trigger: GTTCCAACTACCACAAAAAGACCACACAGTGGACCACGGAGCAACCCAGGCGCTGGAAGACTGAATAATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377962.8 ENST00000448904.6 |
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| CDS TCA 72 bp | TTTCCCCTTCCTGCTGATGATAAGGATTATCAGGATTaGAGGCTTGTGAGTCCTCTTGAACACTGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FPLPADDKDYQD*RLVSPLEHWVW Trigger: CCAGACCCAGTGTTCAAGAGGACTCACAAGCCTTCAATCCTGATAATCCTTATCATCAGCAGGAAGGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377962.8 |
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| CDS TCA 72 bp | TGCTTTCCCCTTCCTGATGATAAGGATTATCAGGATTaGAGGCTTGTGAGTCCTCTTGAACACTGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CFPLPDDKDYQD*RLVSPLEHWVW Trigger: CCAGACCCAGTGTTCAAGAGGACTCACAAGCCTTCAATCCTGATAATCCTTATCATCAGGAAGGGGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448904.6 |
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| CDS CAA 72 bp | TCTTCAGCTCCACTTCCCATTTTAAAGGTCTCCAAGTaGTTCCCAGCGTCTATTTCCATTGACCCATCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSAPLPILKVSK*FPASISIDPSC Trigger: ACAAGATGGGTCAATGGAAATAGACGCTGGGAACAACTTGGAGACCTTTAAAATGGGAAGTGGAGCTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS CAA 90 bp | GCAATTGCTTCTTCAGCTCCACTTCCCATTTTAAAGGTCTCCAAGTaGTTCCCAGCGTCTATTTCCATTGACCCATCTTGTAATTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AIASSAPLPILKVSK*FPASISIDPSCNFP Trigger: TGGGAAATTACAAGATGGGTCAATGGAAATAGACGCTGGGAACAACTTGGAGACCTTTAAAATGGGAAGTGGAGCTGAAGAAGCAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS TCA 72 bp | ACCTTAGAACTCAAGAAGCTGTTGTCCTTCACAGGCTaGTCTACAGCCACCCAGATAAGAGAATTTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TLELKKLLSFTG*STATQIREFSS Trigger: TGAAGAAAATTCTCTTATCTGGGTGGCTGTAGATCAGCCTGTGAAGGACAACAGCTTCTTGAGTTCTAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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| CDS CCA 72 bp | AGCCACCCAGATAAGAGAATTTTCTTCATATTTGACTaGCATGATCTTGCCTTCCAGTTTGGAGGAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SHPDKRIFFIFD*HDLAFQFGGDA Trigger: AGCATCTCCTCCAAACTGGAAGGCAAGATCATGCCAGTCAAATATGAAGAAAATTCTCTTATCTGGGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377962.8 ENST00000431550.1 ENST00000448904.6 |
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