RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNKSR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000142675

Ensembl transcript IDs: ENST00000361530.11, ENST00000374253.9, ENST00000465415.1, ENST00000480348.6, ENST00000481077.6, ENST00000482227.5, ENST00000484874.2, ENST00000524529.6, ENST00000525687.5, ENST00000528001.1, ENST00000528281.5, ENST00000531150.5, ENST00000531191.5

Found 632 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAAACCAGCGGCGGCGCCAGCGCGGGCCCATGAAGCCGCCCGGTaGCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAG +
Preference number: 1 (lower is better)
Translates to: HKPAAAPARAHEAAR*LSQQEPAVTVRPAQ
Trigger: CTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATGGGCCCGCGCTGGCGCCGCCGCTGGTTTGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR TCA 90 bp GCCAAAGGAGGTCCGTGGGCTGCGCTGTGTGGGGGTGGCTGCAGGTaGTGTGTCTCCATGGAGGGGACTCCCAGCTTGAGCAGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: AKGGPWAALCGGGCR*CVSMEGTPSLSRAG
Trigger: CCCAGCCCTGCTCAAGCTGGGAGTCCCCTCCATGGAGACACATCACCTGCAGCCACCCCCACACAGCGCAGCCCACGGACCTCCTTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR CCA 90 bp CGCATGAAAGAGCTCCGCCACTGTTCCTGGGTCAGGGGCTGTGGCTaGCCTAGGAGGGACACGCCACCCTGCCTCAGCCCCCGTACCATT +
Preference number: 1 (lower is better)
Translates to: RMKELRHCSWVRGCG*PRRDTPPCLSPRTI
Trigger: AATGGTACGGGGGCTGAGGCAGGGTGGCGTGTCCCTCCTAGGCCAGCCACAGCCCCTGACCCAGGAACAGTGGCGGAGCTCTTTCATGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR CCA 90 bp CTGTCAGAGAGCCAAAGGAGGTCCGTGGGCTGCGCTGTGTGGGGGTaGCTGCAGGTGATGTGTCTCCATGGAGGGGACTCCCAGCTTGAG +
Preference number: 1 (lower is better)
Translates to: LSESQRRSVGCAVWG*LQVMCLHGGDSQLE
Trigger: CTCAAGCTGGGAGTCCCCTCCATGGAGACACATCACCTGCAGCCACCCCCACACAGCGCAGCCCACGGACCTCCTTTGGCTCTCTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR CCA 90 bp TGCTGTCTGTCAGAGAGCCAAAGGAGGTCCGTGGGCTGCGCTGTGTaGGGGTGGCTGCAGGTGATGTGTCTCCATGGAGGGGACTCCCAG +
Preference number: 1 (lower is better)
Translates to: CCLSESQRRSVGCAV*GWLQVMCLHGGDSQ
Trigger: CTGGGAGTCCCCTCCATGGAGACACATCACCTGCAGCCACCCCCACACAGCGCAGCCCACGGACCTCCTTTGGCTCTCTGACAGACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR TCA 90 bp AGTGTGCTCTGTAGCGCCCGCACACGGTGCACTCGCTCATTGAGCTaGGGGTCTCGGTTGCGCCGCATGAAAGAGCTCCGCCACTGTTCC +
Preference number: 1 (lower is better)
Translates to: SVLCSARTRCTRSLS*GSRLRRMKELRHCS
Trigger: GGAACAGTGGCGGAGCTCTTTCATGCGGCGCAACCGAGACCCTCAGCTCAATGAGCGAGTGCACCGTGTGCGGGCGCTACAGAGCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR CCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTaGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGGTC +
Preference number: 1 (lower is better)
Translates to: SRDALSWTRQKLGLR*PSGQRSGARVLARV
Trigger: GACCCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR CCA 90 bp CCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACTTGG +
Preference number: 1 (lower is better)
Translates to: PTTTCSLIWTTSSPG*ICSRESVGTWVSTW
Trigger: CCAAGTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR TCA 90 bp CAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTaGGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCA +
Preference number: 1 (lower is better)
Translates to: QNPGMLCPGHVRSWG*GGPRVKGQELECWP
Trigger: TGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR TCA 90 bp GGTGGCACAAAGCCCAGGCAGAGGGGTCAGCTCGGGGTGAGACCATaGCTAGCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGC +
Preference number: 1 (lower is better)
Translates to: GGTKPRQRGQLGVRP*LAVLLPTLNRIQGC
Trigger: GCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGACCCCTCTGCCTGGGCTTTGTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR GCA 90 bp GAGCCAGAAGAGGAGGGCGTCAGCTTCATGCAACAGCTCCACAGCTaGACAGAGGACATCAATAGGGGTCTTGGCACAGTCCCCCAGGCA +
Preference number: 1 (lower is better)
Translates to: EPEEEGVSFMQQLHS*TEDINRGLGTVPQA
Trigger: TGCCTGGGGGACTGTGCCAAGACCCCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCTCCTCTTCTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR GCA 90 bp ACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTaGAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACTTGGGACACA +
Preference number: 1 (lower is better)
Translates to: TTCSLIWTTSSPGWI*SRESVGTWVSTWDT
Trigger: TGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR GCA 90 bp ACAGTCCCCCAGGCAGCCTTGGACTATGCTCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTTCTCTGTCTG +
Preference number: 1 (lower is better)
Translates to: TVPQAALDYALEVMG*PQKSLCQALQVLCL
Trigger: CAGACAGAGAACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR CCA 90 bp TTGGCACAGTCCCCCAGGCAGCCTTGGACTATGCTCTGGAAGTCATaGGTTGCCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTTCTCT +
Preference number: 1 (lower is better)
Translates to: LAQSPRQPWTMLWKS*VAPRSPSVRLCRFS
Trigger: AGAGAACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGACTGTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR GCA 90 bp CAGTGGGAACCTGGGTGTCCACTTGGGACACAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTAGGCCCAATGGACTGTCCAGCTGCA +
Preference number: 1 (lower is better)
Translates to: QWEPGCPLGTQSAGN*WWCEFLGPMDCPAA
Trigger: TGCAGCTGGACAGTCCATTGGGCCTAGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTTCCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR CCA 90 bp TGGGAACCTGGGTGTCCACTTGGGACACAAAGTGCTGGCAATTGCTaGTGGTGTGAATTTCTAGGCCCAATGGACTGTCCAGCTGCACCT +
Preference number: 1 (lower is better)
Translates to: WEPGCPLGTQSAGNC*WCEFLGPMDCPAAP
Trigger: AGGTGCAGCTGGACAGTCCATTGGGCCTAGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CCA 90 bp GCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATAGTGATGGGCTCCTCTaGTGCGGGGAGTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: AFRNRSQPSQSGRPSSRHSDGLL*CGESRT
Trigger: GGTCCTGGACTCCCCGCACCAGAGGAGCCCATCACT...ATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR TCA 90 bp TCAGGGGCTGTGGCTGGCCTAGGAGGGACACGCCACCCTGCCTCAGCCCCCGTACTCGGGGTGAGACCATaGCTAGCAGTACTACTTCCC +
Preference number: 2 (lower is better)
Translates to: SGAVAGLGGTRHPASAPVLGVRP*LAVLLP
Trigger: GGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAG...TACGGGGGCTGAGGCAGGGTGGCGTGTCCCTCCTAGGCCAGCCACAGCCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR GCA 90 bp TGCACCTGCTCGAGCACGGCCTTCTGTTCCAGCAGCTCCTTGGGGCAGCAGACCTCCCAGCCACGTGGCTaGAGATCCTCAGGACTGTGC +
Preference number: 2 (lower is better)
Translates to: CTCSSTAFCSSSSLGQQTSQPRG*RSSGLC
Trigger: GCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA...GGTCTGCTGCCCCAAGGAGCTGCTGGAACAGAAGGCCGTGCTCGAGCAGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR CAA 90 bp GGGAGGCAGAGTCTGTCCAGGCAGGGCTGGGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAAAGACGTCTTCAGATGGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: GRQSLSRQGWVRDWG*KTGQRQRRLQMGPW
Trigger: CCAGGGCCCCATCTGAAGACGTCTTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCCCTGCCTGGACAGACTCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR TCA 90 bp GAGCGTGTGTCCCTTGAGCACAAACCAGCGGCGGCGCCAGCGCGGGCCCATGAATCCGGGACTGGGGTTTaGAGACAGGTCAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: ERVSLEHKPAAAPARAHESGTGV*RQVKGK
Trigger: TTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGA...TTCATGGGCCCGCGCTGGCGCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR-3UTR CCA 90 bp CCAGGCCCTCTGAGTACAGCTCCCGGTTCTGCTCCTTCCACTGGCGGAACTTCTCTTCAGATGGGGCCCTaGGAGACAGTGGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: PGPLSTAPGSAPSTGGTSLQMGP*ETVGPE
Trigger: CTCTGGCCCCACTGTCTCCCAGGGCCCCATCTGAAG...AGAAGTTCCGCCAGTGGAAGGAGCAGAACCGGGAGCTGTACTCAGAGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR TCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGTCAGAAGCTGGGGTTaGGGTGGCCCTCGGGTCAAA +
Preference number: 2 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALVRSWG*GGPRVK
Trigger: TTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGAC...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR-3UTR CCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTAAGCTGGGGTTGAGGTaGCCCTCGGGTCAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGKLGLR*PSGQRS
Trigger: TGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR CAA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTaGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: TESRDALSWTRQKLG*RWPSGQRSGARVLA
Trigger: GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR-3UTR TCA 90 bp ATCGGGATCTTCTTCAGCACTAAGCTGAGTCCGGCTGGCTCCCGCAGCAGTTCCGTCAGAAGCTGGGGTTaGGGTGGCCCTCGGGTCAAA +
Preference number: 2 (lower is better)
Translates to: IGIFFSTKLSPAGSRSSSVRSWG*GGPRVK
Trigger: TTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGAC...GGAACTGCTGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGAAGATCCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR GCA 90 bp TCCCAGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGCCCTCTGTCAGGCTTTaGAGGTTCTCTGTCTGTAGC +
Preference number: 2 (lower is better)
Translates to: SQPRGCRSSGLCPPSQPLPSVRL*RFSVCS
Trigger: GCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGG...CAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR GCA 90 bp GGATGTTGTGGCAGATCCCAGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTGCTGGACCATCCTCATaGAAGACCTGGCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: GCCGRSQPRGCRSSGLCPAGPSS*KTWLSS
Trigger: GGAGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGC...AGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCTGCCACAACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR GCA 90 bp GTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGCTGTCCAGCTGCACCTaGTCGAGCACGGCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: VDLDNLVSRLDLQSGVSGLSSCT*SSTAFC
Trigger: ACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAG...CCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR TCA 90 bp TCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGGACCATCCTCATGCAAGACCTCCACCACCTGCTCGTTaGTCTGGACAACCTCGTCTC +
Preference number: 2 (lower is better)
Translates to: SSGLCPPSQPLDHPHARPPPPAR*SGQPRL
Trigger: GAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGG...AGGTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR GCA 90 bp CTGTGCCCTCCTTCTCAGCCGCTGGACCATCCTCATGCAAGACCTGGCTCAGCTCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: LCPPSQPLDHPHARPGSALEVMG*PQKSLC
Trigger: ACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAG...AGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR GCA 90 bp TCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACTTGGGAAGGGCGTCAGCTTCATaGAACAGCTCCACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: SRLDLQSGVSGNLGVHLGRASAS*NSSTAA
Trigger: TGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCT...TCCCAAGTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CCA 90 bp TCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACTTGGGACCTTGGACTATGCTCTaGAAGTCATGGGTTGCCCCC +
Preference number: 2 (lower is better)
Translates to: SRLDLQSGVSGNLGVHLGPWTML*KSWVAP
Trigger: GGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGG...TCCCAAGTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CCA 90 bp ACAACCTCGTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCCCCAGGCAGCCTTaGACTATGCTCTGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: TTSSPGWICSRESVGTWVSPRQP*TMLWKS
Trigger: TGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGA...CACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR CAA 90 bp CACAGTCCCCCAGGCAGCCTTGGACTATGCTCTGGAAGTCATGGGTaGCCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTTCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: HSPPGSLGLCSGSHG*PPEVPLSGFAGSLS
Trigger: AGACAGAGAACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CCA 90 bp TTCTTACGGGGCCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTAAGCTGGGGTTGAGGTaGCCCTCGGGTCAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: FLRGHPTTTCSLIWTTSSKLGLR*PSGQRS
Trigger: TGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT...AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR CCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCTGTACAGACCTGGTTTaGGGGAGAACTGCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: KLGLRWPSGQRSGARVLACTDLV*GRTAKE
Trigger: TTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACA...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR-3UTR TCA 90 bp TCCTCATGCAAGACCTGGCTCAGCTCCTCCAACAAGTCTCGGATCTCCTGGCATAGAAGAGGTACCTGCTaGGCCAGAAGAGGAGGGCGT +
Preference number: 2 (lower is better)
Translates to: SSCKTWLSSSNKSRISWHRRGTC*ARRGGR
Trigger: ACGCCCTCCTCTTCTGGCTCAGCAGGTACCTCTTCT...ATGCCAGGAGATCCGAGACTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR GCA 90 bp TGGTGTGAATTTCTAGGCCCAATGGACTGTCCAGCTGCACCTGCTCGAGCACGGCATCCCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 2 (lower is better)
Translates to: WCEFLGPMDCPAAPARARHPTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATG...CCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTAGAAATTCACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR GCA 90 bp TTCTTACGGGGCCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCATCCCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 2 (lower is better)
Translates to: FLRGHPTTTCSLIWTTSSHPTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATG...AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
3UTR-3UTR GCA 90 bp CGCACCCACATGCTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGGAGCCCTGGAGTCCCTaGTACCCCTGCTGGGAGTAT +
Preference number: 2 (lower is better)
Translates to: RTHMLRSVRVSAAKMKGLEPWSP*YPCWEY
Trigger: ATACTCCCAGCAGGGGTAGCAGGGACTCCAGGGCTC...CAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGGGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR-3UTR GCA 90 bp CTGTGCCCTCCTTCTCAGCCGCTGGACCATCCTCATGCAAGACCTGGCTCAGCTCAACAGCTCCACAGCTaGACAGAGGACATCAATAGG +
Preference number: 2 (lower is better)
Translates to: LCPPSQPLDHPHARPGSAQQLHS*TEDINR
Trigger: CCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTG...AGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAGGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CCA 90 bp GAATTTCTAGGCCCAATGGACTGTCCAGCTGCACCTGCTCGAGCACGGCCTTCTACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: EFLGPMDCPAAPARARPSTCSLI*TTSSPG
Trigger: GCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT...AGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTAGAAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR CAA 90 bp TCATGCAACAGCTCCACAGCTGCACAGAGGACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAGCCTTGGACTATGCTCTGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: SCNSSTAAQRTSIGV*AQSPRQPWTMLWKS
Trigger: TGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTGCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR TCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTATACTACTTCCCACCCTaGACAGAATCCAGGGATGCT +
Preference number: 2 (lower is better)
Translates to: SDQQDSCQGIQGALESLLYYFPP*TESRDA
Trigger: AGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTA...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR GCA 90 bp TTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAGGCAGCCTTGGACTATaGTCTGGAAGTCATGGGTTG +
Preference number: 2 (lower is better)
Translates to: LIWTTSSPGWICSRESVGGSLGL*SGSHGL
Trigger: CAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCC...TCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CCA 90 bp CGCACCCACATGCTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGGGCTGGGTCCGGGACTaGGGTTTGAAGACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: RTHMLRSVRVSAAKMKGLGWVRD*GLKTGQ
Trigger: TTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCC...CAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGGGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR-3UTR CCA 90 bp TGCACCTGCTCGAGCACGGCCTTCTGTTCCAGCAGCTCCTTGGGGCAGCAGACCGAGAAATCATTTAAGTaGGAGAAGAGGTACCTGCTG +
Preference number: 2 (lower is better)
Translates to: CTCSSTAFCSSSSLGQQTEKSFK*EKRYLL
Trigger: CAGCAGGTACCTCTTCTCCCACTTAAATGATTTCTC...GGTCTGCTGCCCCAAGGAGCTGCTGGAACAGAAGGCCGTGCTCGAGCAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR TCA 90 bp ACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGTCGGGAGCAATTGCTGGTGGTGTaGATTTCTAGGCCCAATGGA +
Preference number: 2 (lower is better)
Translates to: TCSLIWTTSSPGWICSREQLLVV*ISRPNG
Trigger: TCCATTGGGCCTAGAAATTCACACCACCAGCAATTG...CTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATAGGGATGCTCTGTCCTaGACACGTCAGAAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SARGETMTSSTTSHPEQNRDALS*TRQKLG
Trigger: CCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR-3UTR CCA 90 bp AGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTACACATCATGGGTGCCCTGCTACCCCTGCTaGGAGTATGGCTGGGGGTTC +
Preference number: 2 (lower is better)
Translates to: RSVRVSAAKMKGLYTSWVPCYPC*EYGWGF
Trigger: GAACCCCCAGCCATACTCCCAGCAGGGGTAGCAGGG...CACCCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR-3UTR GCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGAACAGAATCCAGGGATaGTCTGTCCTGGACACGTCA +
Preference number: 2 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGNRIQG*SVLDTS
Trigger: TGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTT...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR-3UTR CCA 90 bp TGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACCCACATGCTCAGAAAGACGTCTTCAGATaGGGCCCTGGGAGACAGTGG +
Preference number: 2 (lower is better)
Translates to: WRLVLGDAGNEMTHPHAQKDVFR*GPGRQW
Trigger: CCACTGTCTCCCAGGGCCCCATCTGAAGACGTCTTT...CTGAGCATGTGGGTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR GCA 90 bp CACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGCAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTA +
Preference number: 2 (lower is better)
Translates to: HHHLLVDLDNLVSRLDLQQSAGN*WWCEFL
Trigger: TAGAAATTCACACCACCAGCAATTGCCAGCACTTTG...CTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CCA 90 bp ATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTACACATCATGGGTGAGGGCTGGGTCCGGGACTaGGGTTTGAAGACAGGTCAA +
Preference number: 2 (lower is better)
Translates to: ICQGISSEDEGFVHIMGEGWVRD*GLKTGQ
Trigger: TTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCC...CTCACCCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR-3UTR CCA 90 bp GAATTTCTAGGCCCAATGGACTGTCCAGCTGCACCTGCTCGAGCACGGCCTTCTAAGTCTCGGATCTCCTaGCATGCTGAGAAATCATTT +
Preference number: 2 (lower is better)
Translates to: EFLGPMDCPAAPARARPSKSRIS*HAEKSF
Trigger: AAATGATTTCTCAGCATGCCAGGAGATCCGAGACTT...AGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTAGAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR TCA 90 bp GAAGGGTTTGTACACATCATGGGTGAGCTGAAACACATATTTCTTCTTCTGATCTCTTCAGCACTAAGCTaGGTCCGGCTGGCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: EGFVHIMGELKHIFLLLISSALS*VRLAPA
Trigger: TGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGA...GATCAGAAGAAGAAATATGTGTTTCAGCTCACCCATGATGTGTACAAACCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR GCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGAACAGAATCCAGGGATaGTCTGTCCTGGACACGTCA +
Preference number: 2 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELNRIQG*SVLDTS
Trigger: TGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTT...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR GCA 72 bp GCGGCGGCGCCAGCGCGGGCCCATGAAGCCGCCCGGTaGCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGG +
Preference number: 3 (lower is better)
Translates to: AAAPARAHEAAR*LSQQEPAVTVR
Trigger: CCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATGGGCCCGCGCTGGCGCCGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR TCA 72 bp CCTGGGGCTGGCGGTACCAGTAGAGCGTGTGTCCCTTaGGCACAAACCAGCGGCGGCGCCAGCGCGGGCCCA +
Preference number: 3 (lower is better)
Translates to: PGAGGTSRACVP*AQTSGGASAGP
Trigger: TGGGCCCGCGCTGGCGCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTCTACTGGTACCGCCAGCCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR CCA 72 bp AGCCAAAGGAGGTCCGTGGGCTGCGCTGTGTGGGGGTaGCTGCAGGTGATGTGTCTCCATGGAGGGGACTCC +
Preference number: 3 (lower is better)
Translates to: SQRRSVGCAVWG*LQVMCLHGGDS
Trigger: GGAGTCCCCTCCATGGAGACACATCACCTGCAGCCACCCCCACACAGCGCAGCCCACGGACCTCCTTTGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR CCA 72 bp GGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTaGCCAGGGTCAGAGGTCAGGAGGTCGGAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: GGPRVKGQELEC*PGSEVRRSEAA
Trigger: AGCAGCCTCCGACCTCCTGACCTCTGACCCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR TCA 72 bp TGTAGCGCCCGCACACGGTGCACTCGCTCATTGAGCTaGGGGTCTCGGTTGCGCCGCATGAAAGAGCTCCGC +
Preference number: 3 (lower is better)
Translates to: CSARTRCTRSLS*GSRLRRMKELR
Trigger: GCGGAGCTCTTTCATGCGGCGCAACCGAGACCCTCAGCTCAATGAGCGAGTGCACCGTGTGCGGGCGCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR CAA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGCGTCAGAAGCTGGGGTaGAGGTGGCCCTCGGGTCAA +
Preference number: 3 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRRQKLG*RWPSGQ
Trigger: TTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACG...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR TCA 72 bp GGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTaGGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAG +
Preference number: 3 (lower is better)
Translates to: GMLCPGHVRSWG*GGPRVKGQELE
Trigger: CTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR TCA 72 bp GGGTCTCCGGTATCGGGATCTTCTTCAGCACTAAGCTaGGTCCGGCTGGCTCCCGCAGCAGTTCCCTCACCA +
Preference number: 3 (lower is better)
Translates to: GSPVSGSSSALS*VRLAPAAVPSP
Trigger: TGGTGAGGGAACTGCTGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGAAGATCCCGATACCGGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR GCA 72 bp AGATCCCAGCCACGTGGCTGCAGATCCTCAGGACTGTaGCCTCCTTCTCAGCCGCTGGACCATCCTCATGCA +
Preference number: 3 (lower is better)
Translates to: RSQPRGCRSSGL*PPSQPLDHPHA
Trigger: TGCATGAGGATGGTCCAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR CCA 72 bp GCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTaGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTG +
Preference number: 3 (lower is better)
Translates to: ALSWTRQKLGLR*PSGQRSGARVL
Trigger: CAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR CCA 72 bp TTACGGGGCCATCCCACCACCACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGCTGGATCTGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: LRGHPTTTCSLI*TTSSPGWICSR
Trigger: CCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
3UTR CCA 72 bp CCCTCTGAGTACAGCTCCCGGTTCTGCTCCTTCCACTaGCGGAACTTCTCTCCTGTCAGCTCAGGGTCACCC +
Preference number: 3 (lower is better)
Translates to: PSEYSSRFCSFH*RNFSPVSSGSP
Trigger: GGGTGACCCTGAGCTGACAGGAGAGAAGTTCCGCCAGTGGAAGGAGCAGAACCGGGAGCTGTACTCAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR CAA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCTGTACAGACCTGGTTaGGGGGAGAACTGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGLYRPG*GENCQG
Trigger: TCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR-3UTR CAA 90 bp CCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACTTGGGACACCACCACCTGCTCGTaGATCTGGACAACCTCGTCT +
Preference number: 3 (lower is better)
Translates to: PGWICSRESVGTWVSTWDTTTCS*IWTTSS
Trigger: AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGT...GTCCCAAGTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CAA 90 bp ACAACCTCGTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: TTSSPGWICSRESVGTWVTSIGV*AQSPRQ
Trigger: CTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGT...CACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR CCA 72 bp ACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTG +
Preference number: 3 (lower is better)
Translates to: TCSLIWTTSSPG*ICSRESVGTWV
Trigger: CACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CAA 90 bp ATCCTGGGGCTGGCGGTACCAGTAGAGCGTGTGTCCCTTGAGCACAAACCAGCGCTGTACAGACCTGGTTaGGGGGAGAACTGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: ILGLAVPVERVSLEHKPALYRPG*GENCQG
Trigger: TCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAG...CGCTGGTTTGTGCTCAAGGGACACACGCTCTACTGGTACCGCCAGCCCCAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
3UTR-3UTR CAA 90 bp GGGGGCCCGGCCTGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: GGPAWRLVLGDAGNEMTHVRDWG*KTGQRQ
Trigger: TTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGAC...GTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR-3UTR CAA 90 bp CTCAGCCGCTGGACCATCCTCATGCAAGACCTGGCTCAGCTCCTCCAACAAGTCTCTGGAAGTCATGGGTaGCCCCCAGAAGTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: LSRWTILMQDLAQLLQQVSGSHG*PPEVPL
Trigger: CAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGA...GACTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGCGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR TCA 72 bp TGTTCTTACGGGGCCATCCCACCACCACCTGCTCGTTaGTCTGGACAACCTCGTCTCCAGGCTGGATCTGCA +
Preference number: 3 (lower is better)
Translates to: CSYGAIPPPPAR*SGQPRLQAGSA
Trigger: TGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
3UTR GCA 72 bp TCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTaGAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACT +
Preference number: 3 (lower is better)
Translates to: SLIWTTSSPGWI*SRESVGTWVST
Trigger: AGTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR GCA 72 bp CAGGCAGCCTTGGACTATGCTCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: QAALDYALEVMG*PQKSLCQALQV
Trigger: AACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR GCA 72 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATaGTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAG +
Preference number: 3 (lower is better)
Translates to: AVLLPTLNRIQG*SVLDTSEAGVE
Trigger: CTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR GCA 72 bp TACCTGCTGAGCCAGAAGAGGAGGGCGTCAGCTTCATaGAACAGCTCCACAGCTGCACAGAGGACATCAATA +
Preference number: 3 (lower is better)
Translates to: YLLSQKRRASAS*NSSTAAQRTSI
Trigger: TATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCTCCTCTTCTGGCTCAGCAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CAA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGCGTCAGAAGCTGGGGTaGAGGTGGCCCTCGGGTCAA +
Preference number: 3 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELRQKLG*RWPSGQ
Trigger: TTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACG...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR TCA 72 bp ACTTGGGACACAAAGTGCTGGCAATTGCTGGTGGTGTaGATTTCTAGGCCCAATGGACTGTCCAGCTGCACC +
Preference number: 3 (lower is better)
Translates to: TWDTKCWQLLVV*ISRPNGLSSCT
Trigger: GGTGCAGCTGGACAGTCCATTGGGCCTAGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR GCA 72 bp CCTGGGTGTCCACTTGGGACACAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTAGGCCCAATGGACTGT +
Preference number: 3 (lower is better)
Translates to: PGCPLGTQSAGN*WWCEFLGPMDC
Trigger: ACAGTCCATTGGGCCTAGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR CCA 72 bp GGGTGTCCACTTGGGACACAAAGTGCTGGCAATTGCTaGTGGTGTGAATTTCTAGGCCCAATGGACTGTCCA +
Preference number: 3 (lower is better)
Translates to: GCPLGTQSAGNC*WCEFLGPMDCP
Trigger: TGGACAGTCCATTGGGCCTAGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
3UTR-3UTR CAA 90 bp CTGATCATGTCCACTTTCCAGACTATAGTTGGAGACATTGATGAGGCCCTCAGCGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: LIMSTFQTIVGDIDEALSVRDWG*KTGQRQ
Trigger: TTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGAC...GCTGAGGGCCTCATCAATGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
3UTR CCA 72 bp TGTCCACTTGGGACACAAAGTGCTGGCAATTGCTGGTaGTGTGAATTTCTAGGCCCAATGGACTGTCCAGCT +
Preference number: 3 (lower is better)
Translates to: CPLGTQSAGNCW*CEFLGPMDCPA
Trigger: AGCTGGACAGTCCATTGGGCCTAGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR TCA 90 bp TGTCCCTTGAGCACAAACCAGCGGCGGCGCCAGCGCGGGCCCATGAAGCCGCCCGGGGGTGGCTGCAGGTaGTGTGTCTCCATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPLSTNQRRRQRGPMKPPGGGCR*CVSMEG
Trigger: CCCCTCCATGGAGACACATCACCTGCAGCCACCCCC...GGGCGGCTTCATGGGCCCGCGCTGGCGCCGCCGCTGGTTTGTGCTCAAGGGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp AGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATGACACCCGCCGGCGGCCACCACCTGCTCGTTaGTCTGGACAACCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SQPSQSGRPSSRHDTRRRPPPAR*SGQPRL
Trigger: GAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGG...CCGCCGGCGGGTGTCATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp GCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGGAGCCCTGGAGTCCCTaGTACCCCTGCTGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: AARCLSQQEPAVTVRPAQEPWSP*YPCWEY
Trigger: ATACTCCCAGCAGGGGTAGCAGGGACTCCAGGGCTC...CTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CCA 90 bp AAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCCCCTGCTACCCCTGCTaGGAGTATGGCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KPPGAFRNRSQPSQSGRPPCYPC*EYGWGF
Trigger: GAACCCCCAGCCATACTCCCAGCAGGGGTAGCAGGG...GGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp AAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCCCTGCAGCTTTGCCTTaGGTGTGCTCTGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KPPGAFRNRSQPSQSGRPPAALP*VCSVAP
Trigger: GGGCGCTACAGAGCACACTCAAGGCAAAGCTGCAGG...GGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp AGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATGACACCCGCCGGCGGGAGTCAGTGGGAACCTaGGTGTCCACTTGGGACACA +
Preference number: 4 (lower is better)
Translates to: SQPSQSGRPSSRHDTRRRESVGT*VSTWDT
Trigger: TGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTC...CCGCCGGCGGGTGTCATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGAGGGCTGGGCGAGGCTaGGTGGGACCCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARRAGRG*VGPSLI
Trigger: GATGAGGCTGGGTCCCACTCAGCCTCGCCCAGCCCT...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TCAGGGGCTGTGGCTGGCCTAGGAGGGACACGCCACCCTGCCTCAGCCCCCGTACATGAAGCCGCCCGGTaGCTTTCGCAACAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGAVAGLGGTRHPASAPVHEAAR*LSQQEP
Trigger: TGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATG...TACGGGGGCTGAGGCAGGGTGGCGTGTCCCTCCTAGGCCAGCCACAGCCCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp TGTCCCTTGAGCACAAACCAGCGGCGGCGCCAGCGCGGGCCCATGAAGCCGCCCTACAGCTCCCGGTTCTaGTCCTTCCACTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: CPLSTNQRRRQRGPMKPPYSSRF*SFHWRN
Trigger: GTTCCGCCAGTGGAAGGAGCAGAACCGGGAGCTGTA...GGGCGGCTTCATGGGCCCGCGCTGGCGCCGCCGCTGGTTTGTGCTCAAGGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp AAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCGCAGTCGGGAGTCAGTaGGAACCTGGGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: KPPGAFRNRSQPSQSGRPAVGSQ*EPGCPL
Trigger: AAGTGGACACCCAGGTTCCCACTGACTCCCGACTGC...GGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CCA 90 bp GCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AARCLSQQEPAVTVRPAQTCSLI*TTSSPG
Trigger: GCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT...CTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGCCAGCGCGGGCCCATaGAGCCGCCCGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGASAGP*SRPVPF
Trigger: GAAAGGCACCGGGCGGCTTCATGGGCCCGCGCTGGC...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGGCCAGCGCGGGCCCATaGAGCCGCCCGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRASAGP*SRPVPF
Trigger: GAAAGGCACCGGGCGGCTTCATGGGCCCGCGCTGGC...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCATCGTCCGGGTCCTCTaGTTCGGTCTCACTGTAGCA +
Preference number: 4 (lower is better)
Translates to: KPPGAFRNRSQPSQSGRPIVRVL*FGLTVA
Trigger: TGCTACAGTGAGACCGAAGCAGAGGACCCGGACGAT...GGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGCAGGAGGTCGGAGGCTaGTCTCTGAGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGQEVGG*SLRSGG
Trigger: GCCCCCTGACCTCAGAGAGCAGCCTCCGACCTCCTG...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGCAGCTTGAGCAGGGCTaGGCGAGGCTGAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARQLEQG*ARLSGT
Trigger: GGTCCCACTCAGCCTCGCCCAGCCCTGCTCAAGCTG...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGAGAGCGTGTGTCCCTTaGGCACAAACCAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGRACVP*AQTSGG
Trigger: GCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTCT...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACAGGGCTGGGCGAGGCTaGGTGGGACCCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYRAGRG*VGPSLI
Trigger: GATGAGGCTGGGTCCCACTCAGCCTCGCCCAGCCCT...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGGGGGGTGGCTGCAGGTaGTGTGTCTCCATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRGGGCR*CVSMEG
Trigger: CCCCTCCATGGAGACACATCACCTGCAGCCACCCCC...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGACTTGGGACACAAAGTaGTGGCAATTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AARCLSQQEPAVTVRPAQTWDTK*WQLLVV
Trigger: CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGT...CTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp GCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATTCTCCAGGCTGGATCTaGAGTCGGGAGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: AFRNRSQPSQSGRPSSRHSPGWI*SRESVG
Trigger: TCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGA...ATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGAGTCCCTGCTACCCCTaGTGGGAGTATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARSPCYP*WEYGWG
Trigger: CCCCCAGCCATACTCCCAGCAGGGGTAGCAGGGACT...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GGGGGCCCGGCCTGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACAGGAGGTCCGTGGGCTaGGCTGTGTGGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGPAWRLVLGDAGNEMTHRRSVG*AVWGWL
Trigger: CAGCCACCCCCACACAGCGCAGCCCACGGACCTCCT...GTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGCAGGAGGTCGGAGGCTaGTCTCTGAGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSQEVGG*SLRSGG
Trigger: GCCCCCTGACCTCAGAGAGCAGCCTCCGACCTCCTG...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GAGCGTGTGTCCCTTGAGCACAAACCAGCGGCGGCGCCAGCGCGGGCCCATGAAGCAGTCGGGAGTCAGTaGGAACCTGGGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: ERVSLEHKPAAAPARAHEAVGSQ*EPGCPL
Trigger: AAGTGGACACCCAGGTTCCCACTGACTCCCGACTGC...TTCATGGGCCCGCGCTGGCGCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGCCCTGCTACCCCTGCTaGGAGTATGGCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGPCYPC*EYGWGF
Trigger: GAACCCCCAGCCATACTCCCAGCAGGGGTAGCAGGG...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCCAGCTTGAGCAGGGCTaGGCGAGGCTGAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLAQLEQG*ARLSGT
Trigger: GGTCCCACTCAGCCTCGCCCAGCCCTGCTCAAGCTG...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGCAGCTTGAGCAGGGCTaGGCGAGGCTGAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSQLEQG*ARLSGT
Trigger: GGTCCCACTCAGCCTCGCCCAGCCCTGCTCAAGCTG...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCTCAGAGGTCAAGATGTaGGAGCTGCCTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: KPPGAFRNRSQPSQSGRPSEVKM*ELPSAC
Trigger: ACAGGCTGAAGGCAGCTCCCACATCTTGACCTCTGA...GGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTGGAGGGGCAGGGCTGTaGCCCCAGAGGTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGGGAGL*PQRLED
Trigger: ATCCTCCAACCTCTGGGGCCACAGCCCTGCCCCTCC...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATGGTCGCCAGGCCTTTTaGTTTCTTCCGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: AFRNRSQPSQSGRPSSRHGRQAF*FLPTNR
Trigger: CCTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACC...ATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGCCAGCGCGGGCCCATaGAGCCGCCCGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAASAGP*SRPVPF
Trigger: GAAAGGCACCGGGCGGCTTCATGGGCCCGCGCTGGC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGAGAGCGTGTGTCCCTTaGGCACAAACCAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWRACVP*AQTSGG
Trigger: GCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTCT...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGAGCGTGTGTCCCTTaGGCACAAACCAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRRACVP*AQTSGG
Trigger: GCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTCT...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGAGGGCTGGGCGAGGCTaGGTGGGACCCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRRAGRG*VGPSLI
Trigger: GATGAGGCTGGGTCCCACTCAGCCTCGCCCAGCCCT...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGCTCGGTTGCGCCGCATaGAAGAGCTCCGCCACTGTT +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARLGCAA*KSSATV
Trigger: AACAGTGGCGGAGCTCTTTCATGCGGCGCAACCGAG...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGGTCAGAAGCTGGGGTTaGGGTGGCCCTCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARVRSWG*GGPRVK
Trigger: TTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGAC...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACGGAGGGCAAGGGGGATaGGATGAGCCCACGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYGGQGG*DEPTVS
Trigger: GGAGACCGTGGGCTCATCTCATCCCCCTTGCCCTCC...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525687.5
CDS-3UTR GCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGCTGTCCAGCTGCACCTaGTCGAGCACGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARLSSCT*SSTAFC
Trigger: ACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAG...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCGATGACGCACCCACATaGTCAGATCTGTCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: KPPGAFRNRSQPSQSGRPDDAPT*SDLSGY
Trigger: ATACCCTGACAGATCTGAGCATGTGGGTGCGTCATC...GGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGCTTTGGGGGCAGAGCTaGAGCAGGTTCTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGLWGQS*SRFLPG
Trigger: GCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAG...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GGGCCCATGAAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GPMKPPGAFRNRSQPSQSTCSLI*TTSSPG
Trigger: GCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT...GGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CGCCACCCTGCCTCAGCCCCCGTACCATTCCTTCCAGTGCCTCTTCACTGCTGTAGTGATGGGCTCCTCTaGTGCGGGGAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RHPASAPVPFLPVPLHCCSDGLL*CGESRT
Trigger: GGTCCTGGACTCCCCGCACCAGAGGAGCCCATCACT...ACAGCAGTGAAGAGGCACTGGAAGGAATGGTACGGGGGCTGAGGCAGGGTGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCTTCAGATGGGGCCCTaGGAGACAGTGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGLQMGP*ETVGPE
Trigger: CTCTGGCCCCACTGTCTCCCAGGGCCCCATCTGAAG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCCCCTGCTACCCCTGCTaGGAGTATGGCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLAPCYPC*EYGWGF
Trigger: GAACCCCCAGCCATACTCCCAGCAGGGGTAGCAGGG...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCGCCAAAGGAGGTCCGTaGGCTGCGCTGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCAKGGP*AALCGG
Trigger: ACCCCCACACAGCGCAGCCCACGGACCTCCTTTGGC...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp CGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCGTCAGGGGCTGTGGCTaGCCTAGGAGGGACACGCCA +
Preference number: 4 (lower is better)
Translates to: RPTGLLSGDSGSPGVPATVRGCG*PRRDTP
Trigger: TGGCGTGTCCCTCCTAGGCCAGCCACAGCCCCTGAC...GGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGAGGGGCAGGGCTGTaGCCCCAGAGGTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALGGAGL*PQRLED
Trigger: ATCCTCCAACCTCTGGGGCCACAGCCCTGCCCCTCC...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGAGAAGAGGTACCTGCTaGGCCAGAAGAGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGRRGTC*ARRGGR
Trigger: ACGCCCTCCTCTTCTGGCTCAGCAGGTACCTCTTCT...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GCTGCACCTGCTCGAGCACGGCCTTCTGTTCCAGCAGCTCCTTGGGGCAGCAGACCACCACCTGCTCGTTaGTCTGGACAACCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: AAPARARPSVPAAPWGSRPPPAR*SGQPRL
Trigger: GAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGG...TCTGCTGCCCCAAGGAGCTGCTGGAACAGAAGGCCGTGCTCGAGCAGGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR TCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGTCTTCAGCACTAAGCTaGGTCCGGCTGGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWSSALS*VRLAPA
Trigger: TGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGA...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CGCACCCACATGCTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGGCCAGCGCGGGCCCATaGAGCCGCCCGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RTHMLRSVRVSAAKMKGLASAGP*SRPVPF
Trigger: GAAAGGCACCGGGCGGCTTCATGGGCCCGCGCTGGC...CAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp AGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATGACACCCGCCGGCGGTATCAGCAGCGAAGATaGAGGGTTTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: SQPSQSGRPSSRHDTRRRYQQRR*RVCTHH
Trigger: ATGATGTGTACAAACCCTTCATCTTCGCTGCTGATA...CCGCCGGCGGGTGTCATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGCTCGGTTGCGCCGCATaGAAGAGCTCCGCCACTGTT +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSLGCAA*KSSATV
Trigger: AACAGTGGCGGAGCTCTTTCATGCGGCGCAACCGAG...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCTCGGTTGCGCCGCATaGAAGAGCTCCGCCACTGTT +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGLGCAA*KSSATV
Trigger: AACAGTGGCGGAGCTCTTTCATGCGGCGCAACCGAG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCCTCGGTTGCGCCGCATaGAAGAGCTCCGCCACTGTT +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLALGCAA*KSSATV
Trigger: AACAGTGGCGGAGCTCTTTCATGCGGCGCAACCGAG...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTGGTGCACTCGCTCATTaGGCTGAGGGTCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGGALAH*AEGLGC
Trigger: GCAACCGAGACCCTCAGCTCAATGAGCGAGTGCACC...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCCCTGCAGCTTTGCCTTaGGTGTGCTCTGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLAPAALP*VCSVAP
Trigger: GGGCGCTACAGAGCACACTCAAGGCAAAGCTGCAGG...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGTCAGAAGCTGGGGTTaGGGTGGCCCTCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSVRSWG*GGPRVK
Trigger: TTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGAC...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGGCAAGGGGGATGAGATaGGCCCACGGTCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLARGMR*AHGLPT
Trigger: GGTGGGGAGACCGTGGGCTCATCTCATCCCCCTTGC...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525687.5
CDS-3UTR GCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGCTGTCCAGCTGCACCTaGTCGAGCACGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRLSSCT*SSTAFC
Trigger: ACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAG...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGCTGTCCAGCTGCACCTaGTCGAGCACGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWLSSCT*SSTAFC
Trigger: ACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAG...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAATGGACTGTCCAGCTaGACCTGCTCGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRNGLSS*TCSSTA
Trigger: GGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATT...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCGAGCCCTGGAGTCCCTaGTACCCCTGCTGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLAEPWSP*YPCWEY
Trigger: ATACTCCCAGCAGGGGTAGCAGGGACTCCAGGGCTC...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCATGAAGCCGCCCGGTaGCTTTCGCAACAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGHEAAR*LSQQEP
Trigger: TGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCAGGGACACGCCACCCTaGCTCAGCCCCCGTACCATT +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALRDTPP*LSPRTI
Trigger: AATGGTACGGGGGCTGAGGCAGGGTGGCGTGTCCCT...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GGGCCCATGAAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCACTTCTTCTAGGACCTaGAGCTCCTGCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GPMKPPGAFRNRSQPSQSTSSRT*SSCSFA
Trigger: GGCAAAGCTGCAGGAGCTGCAGGTCCTAGAAGAAGT...GGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGGCAGAGATGGGAGTaGTCTTCAGGGTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSGQRWE*SSGSEG
Trigger: GCCCTCTGACCCTGAAGAGCACTCCCATCTCTGCCC...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGTCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSSLPVP*PSSASS
Trigger: CGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGA...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR CCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCTTTGGGGGCAGAGCTaGAGCAGGTTCTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGLWGQS*SRFLPG
Trigger: GCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGGACCCAGACCAGGATGTTGTaGCAGATCCCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: SHVAADPQDCALLLSRWTQTRML*QIPATW
Trigger: CCACGTGGCTGGGATCTGCCACAACATCCTGGTCTG...GGTCCAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGCAGACCAGGATGTTGTaGCAGATCCCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGQTRML*QIPATW
Trigger: CCACGTGGCTGGGATCTGCCACAACATCCTGGTCTG...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGGCAGTCGGGAGTCAGTaGGAACCTGGGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGAVGSQ*EPGCPL
Trigger: AAGTGGACACCCAGGTTCCCACTGACTCCCGACTGC...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGTSSPG*ICSRES
Trigger: TGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGT...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CGTCCGGGTCCTCTGCTTCGGTCTCACTGTAGCAGTCTTCCTCTCGGGGTGGGGGGCTGGGTCCGGGACTaGGGTTTGAAGACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: RPGPLLRSHCSSLPLGVGGWVRD*GLKTGQ
Trigger: TTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCC...CCCCACCCCGAGAGGAAGACTGCTACAGTGAGACCGAAGCAGAGGACCCGGACG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTACCCCTGCTaGGAGTATGGCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYPCYPC*EYGWGF
Trigger: GAACCCCCAGCCATACTCCCAGCAGGGGTAGCAGGG...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGGCCCGGCCTGGAGACTaGTACTTGGAGATGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARARPGD*YLEMQV
Trigger: TACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGC...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGCTGGGCGAGGCTGAGTaGGACCCAGCCTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRLGEAE*DPASSS
Trigger: GGACGATGAGGCTGGGTCCCACTCAGCCTCGCCCAG...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGCAGCTTGAGCAGGGCTaGGCGAGGCTGAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGQLEQG*ARLSGT
Trigger: GGTCCCACTCAGCCTCGCCCAGCCCTGCTCAAGCTG...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGCTCCGCCACTGTTCCTaGGTCAGGGGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGLRHCS*VRGCGW
Trigger: CCAGCCACAGCCCCTGACCCAGGAACAGTGGCGGAG...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGAGGGATGCTCTGTCCTaGACACGTCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGRDALS*TRQKLG
Trigger: CCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGAGAAGAGGTACCTGCTaGGCCAGAAGAGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWRRGTC*ARRGGR
Trigger: ACGCCCTCCTCTTCTGGCTCAGCAGGTACCTCTTCT...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR TCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGCCACCACCTGCTCGTTaGTCTGGACAACCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWPPPAR*SGQPRL
Trigger: GAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGG...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR TCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCCCACCACCTGCTCGTTaGTCTGGACAACCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLAPPPAR*SGQPRL
Trigger: GAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGG...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCTCTTCAGCACTAAGCTaGGTCCGGCTGGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RPTGLLSGDSGSPGVPATSSALS*VRLAPA
Trigger: TGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGA...GGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR TCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGAGAGCGTGTGTCCCTTaGGCACAAACCAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRRACVP*AQTSGG
Trigger: GCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTCT...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCAGGGCTGGGCGAGGCTaGGTGGGACCCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSRAGRG*VGPSLI
Trigger: GATGAGGCTGGGTCCCACTCAGCCTCGCCCAGCCCT...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGGGGGGTGGCTGCAGGTaGTGTGTCTCCATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWGGGCR*CVSMEG
Trigger: CCCCTCCATGGAGACACATCACCTGCAGCCACCCCC...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGACTCGCTCATTGAGCTaGGGGTCTCGGTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRTRSLS*GSRLRR
Trigger: GCGGCGCAACCGAGACCCTCAGCTCAATGAGCGAGT...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCGTCAGAAGCTGGGGTTaGGGTGGCCCTCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: DQQDSCQGIQGALESLLPVRSWG*GGPRVK
Trigger: TTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGAC...GGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp CCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATGTACTACTTCCCACCCTaGACAGAATCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: PFATGASRHSPAGPAHGMYYFPP*TESRDA
Trigger: AGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTA...CATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGCTCGGGGTGAGACCATaGCTAGCAGTACTACTTCCC +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARLGVRP*LAVLLP
Trigger: GGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAG...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGGCTGGACCATCCTCATaGAAGACCTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWAGPSS*KTWLSS
Trigger: GGAGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGC...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTCCCAGCCACGTGGCTaGAGATCCTCAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCSQPRG*RSSGLC
Trigger: GCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525687.5
CDS-3UTR GCA 90 bp GACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCAATGGACTGTCCAGCTaGACCTGCTCGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: DQQDSCQGIQGALESLLPNGLSS*TCSSTA
Trigger: GGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATT...GGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGTCTCCAGGCTGGATCTaGAGTCGGGAGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSSPGWI*SRESVG
Trigger: TCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGA...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGGACCCATCCCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: SHVAADPQDCALLLSRWTHPTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATG...GGTCCAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAAGTCCCTGCTACCCCTaGTGGGAGTATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARSPCYP*WEYGWG
Trigger: CCCCCAGCCATACTCCCAGCAGGGGTAGCAGGGACT...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTAAGTCCCTGCTACCCCTaGTGGGAGTATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLSPCYP*WEYGWG
Trigger: CCCCCAGCCATACTCCCAGCAGGGGTAGCAGGGACT...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR GCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGAGTCCCTGCTACCCCTaGTGGGAGTATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLSPCYP*WEYGWG
Trigger: CCCCCAGCCATACTCCCAGCAGGGGTAGCAGGGACT...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR GCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACGAGCCCTGGAGTCCCTaGTACCCCTGCTGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYEPWSP*YPCWEY
Trigger: ATACTCCCAGCAGGGGTAGCAGGGACTCCAGGGCTC...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR GCA 90 bp CGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCGAGCCCTGGAGTCCCTaGTACCCCTGCTGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: RPTGLLSGDSGSPGVPATEPWSP*YPCWEY
Trigger: ATACTCCCAGCAGGGGTAGCAGGGACTCCAGGGCTC...GGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR GCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCCATGAAGCCGCCCGGTaGCTTTCGCAACAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALHEAAR*LSQQEP
Trigger: TGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATG...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCAGGAGGTCCGTGGGCTaGGCTGTGTGGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSRRSVG*AVWGWL
Trigger: CAGCCACCCCCACACAGCGCAGCCCACGGACCTCCT...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGAGGAGGTCCGTGGGCTaGGCTGTGTGGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTRRSVG*AVWGWL
Trigger: CAGCCACCCCCACACAGCGCAGCCCACGGACCTCCT...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGTACAGCTCCCGGTTCTaGTCCTTCCACTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSYSSRF*SFHWRN
Trigger: GTTCCGCCAGTGGAAGGAGCAGAACCGGGAGCTGTA...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGGGTTTGGGGGAGAACTaGCAAGGAACTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRGLGEN*QGTGGA
Trigger: TGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACC...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCACGCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGSRTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGCGTGA...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374253.9
CDS-3UTR CCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCTCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALSLPVP*PSSASS
Trigger: CGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGA...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR CCA 90 bp CTAGGCCCAATGGACTGTCCAGCTGCACCTGCTCGAGCACGGCCTTCTGTTCCATCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LGPMDCPAAPARARPSVPSLPVP*PSSASS
Trigger: CGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGA...TGGAACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACTCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYSLPVP*PSSASS
Trigger: CGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGA...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp GACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTTTGGGGGCAGAGCTaGAGCAGGTTCTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DQQDSCQGIQGALESLLPLWGQS*SRFLPG
Trigger: GCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAG...GGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGTCCCCCAGGCAGCCTTaGACTATGCTCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARSPRQP*TMLWKS
Trigger: TGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGA...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGCTCCTTCTCAGCCGCTaGACCATCCTCATGCAAGAC +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARLLLSR*TILMQD
Trigger: GTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAG...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTCCTTGGGGCAGCAGACCAGGATGTTGTGGCAGATCCCAGCCACGTGGCTGCACAGATCCCAGCCACGTaGCTGCAGATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: LLGAADQDVVADPSHVAAQIPAT*LQILRT
Trigger: AGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCTG...TGCAGCCACGTGGCTGGGATCTGCCACAACATCCTGGTCTGCTGCCCCAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGCAGACCAGGATGTTGTaGCAGATCCCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWQTRML*QIPATW
Trigger: CCACGTGGCTGGGATCTGCCACAACATCCTGGTCTG...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGTSSPG*ICSRES
Trigger: TGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGT...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGAGTGATGGGCTCCTCTaGTGCGGGGAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGSDGLL*CGESRT
Trigger: GGTCCTGGACTCCCCGCACCAGAGGAGCCCATCACT...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGAAAGACGTCTTCAGATaGGGCCCTGGGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGKDVFR*GPGRQW
Trigger: CCACTGTCTCCCAGGGCCCCATCTGAAGACGTCTTT...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CGTCCGGGTCCTCTGCTTCGGTCTCACTGTAGCAGTCTTCCTCTCGGGGTGGGGAAAGACGTCTTCAGATaGGGCCCTGGGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: RPGPLLRSHCSSLPLGVGKDVFR*GPGRQW
Trigger: CCACTGTCTCCCAGGGCCCCATCTGAAGACGTCTTT...CCCCACCCCGAGAGGAAGACTGCTACAGTGAGACCGAAGCAGAGGACCCGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGGGCTGGGTCCGGGACTaGGGTTTGAAGACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRGWVRD*GLKTGQ
Trigger: TTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCC...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGGGCTGGGTCCGGGACTaGGGTTTGAAGACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWGWVRD*GLKTGQ
Trigger: TTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCC...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCTGGGCGAGGCTGAGTaGGACCCAGCCTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGLGEAE*DPASSS
Trigger: GGACGATGAGGCTGGGTCCCACTCAGCCTCGCCCAG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGAAGCTGGGGTTGAGGTaGCCCTCGGGTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSKLGLR*PSGQRS
Trigger: TGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTAGGGATGCTCTGTCCTaGACACGTCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGRDALS*TRQKLG
Trigger: CCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CGCCACCCTGCCTCAGCCCCCGTACCATTCCTTCCAGTGCCTCTTCACTGCTGTAGGGATGCTCTGTCCTaGACACGTCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RHPASAPVPFLPVPLHCCRDALS*TRQKLG
Trigger: CCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT...ACAGCAGTGAAGAGGCACTGGAAGGAATGGTACGGGGGCTGAGGCAGGGTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGTCTTCAGCACTAAGCTaGGTCCGGCTGGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRSSALS*VRLAPA
Trigger: TGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGA...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTGGTCGCCAGGCCTTTTaGTTTCTTCCGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGGRQAF*FLPTNR
Trigger: CCTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACC...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGGGGGTGGCTGCAGGTaGTGTGTCTCCATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVGGGCR*CVSMEG
Trigger: CCCCTCCATGGAGACACATCACCTGCAGCCACCCCC...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ATCGGGATCTTCTTCAGCACTAAGCTGAGTCCGGCTGGCTCCCGCAGCAGTTCCGGTGCACTCGCTCATTaGGCTGAGGGTCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: IGIFFSTKLSPAGSRSSSGALAH*AEGLGC
Trigger: GCAACCGAGACCCTCAGCTCAATGAGCGAGTGCACC...GGAACTGCTGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGAAGATCCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCTCGGGGTGAGACCATaGCTAGCAGTACTACTTCCC +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGLGVRP*LAVLLP
Trigger: GGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCACCTCTCAGCCAAGTTaGCACCTTTCCGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCTSQPS*HLSGGP
Trigger: TGGACCCCCGGAAAGGTGGCAACTTGGCTGAGAGGT...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGCCCTCTGTCAGGCTTTaGAGGTTCTCTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGPSVRL*RFSVCS
Trigger: GCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGG...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSLEVMG*PQKSLC
Trigger: ACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAG...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGGACCGGCAGCCTTGGACTATaGTCTGGAAGTCATGGGTTG +
Preference number: 4 (lower is better)
Translates to: SHVAADPQDCALLLSRWTGSLGL*SGSHGL
Trigger: CAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCC...GGTCCAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGAGGGCGTCAGCTTCATaGAACAGCTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWRASAS*NSSTAA
Trigger: TGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCT...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGCTGGACCATCCTCATaGAAGACCTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALAGPSS*KTWLSS
Trigger: GGAGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGC...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGTCCCAGCCACGTGGCTaGAGATCCTCAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGSQPRG*RSSGLC
Trigger: GCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000531191.5
CDS-3UTR GCA 90 bp CCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATTCCCAGCCACGTGGCTaGAGATCCTCAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: PSHHHLLVDLDNLVSRLDSQPRG*RSSGLC
Trigger: GCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA...ATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGTCCCAGCCACGTGGCTaGAGATCCTCAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRSQPRG*RSSGLC
Trigger: GCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000531191.5
CDS-3UTR GCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACTGTCCAGCTGCACCTaGTCGAGCACGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLLSSCT*SSTAFC
Trigger: ACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAG...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGAATGGACTGTCCAGCTaGACCTGCTCGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLNGLSS*TCSSTA
Trigger: GGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATT...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAAATGGACTGTCCAGCTaGACCTGCTCGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARNGLSS*TCSSTA
Trigger: GGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATT...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GGGCTGGCGGTACCAGTAGAGCGTGTGTCCCTTGAGCACAAACCAGCGGCGGCGACTTGGGACACAAAGTaGTGGCAATTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLAVPVERVSLEHKPAAATWDTK*WQLLVV
Trigger: CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGT...CGCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTCTACTGGTACCGCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGCATGAAGCCGCCCGGTaGCTTTCGCAACAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRHEAAR*LSQQEP
Trigger: TGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATG...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATGTACCATTCCTTCCAGTaGCTCTTCACTGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PFATGASRHSPAGPAHGMYHSFQ*LFTAVC
Trigger: ACAGACAGCAGTGAAGAGGCACTGGAAGGAATGGTA...CATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTAGGGACACGCCACCCTaGCTCAGCCCCCGTACCATT +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGRDTPP*LSPRTI
Trigger: AATGGTACGGGGGCTGAGGCAGGGTGGCGTGTCCCT...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGACCTGCAGCTCCTaGAGCTTTGCCTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLARTCSS*SFALSV
Trigger: CACACTCAAGGCAAAGCTGCAGGAGCTGCAGGTCCT...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGAGGTCGGAGGCTaGTCTCTGAGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGQEVGG*SLRSGG
Trigger: GCCCCCTGACCTCAGAGAGCAGCCTCCGACCTCCTG...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGCAGGAGGTCGGAGGCTaGTCTCTGAGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTQEVGG*SLRSGG
Trigger: GCCCCCTGACCTCAGAGAGCAGCCTCCGACCTCCTG...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGACTTTGGGGGCAGAGCTaGAGCAGGTTCTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARLWGQS*SRFLPG
Trigger: GCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAG...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCCAGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGTCCTCATGCAAGACCTaGCTCAGCTCCTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: SQPRGCRSSGLCPPSQPLSSCKT*LSSSNK
Trigger: CTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGA...CAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCCTCCTTCTCAGCCGCTaGACCATCCTCATGCAAGAC +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLALLLSR*TILMQD
Trigger: GTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAG...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCCAGATCCCAGCCACGTaGCTGCAGATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALQIPAT*LQILRT
Trigger: AGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCTG...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000531191.5
CDS-3UTR CCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGGAGTCAGTGGGAACCTaGGTGTCCACTTGGGACACA +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWESVGT*VSTWDT
Trigger: TGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTC...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYTSSPG*ICSRES
Trigger: TGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGT...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCTTCAGATGGGGCCCTaGGAGACAGTGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGLQMGP*ETVGPE
Trigger: CTCTGGCCCCACTGTCTCCCAGGGCCCCATCTGAAG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCCCTGCTACCCCTGCTaGGAGTATGGCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGPCYPC*EYGWGF
Trigger: GAACCCCCAGCCATACTCCCAGCAGGGGTAGCAGGG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCGCCCGGCCTGGAGACTaGTACTTGGAGATGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCARPGD*YLEMQV
Trigger: TACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGC...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCTGGGCGAGGCTGAGTaGGACCCAGCCTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSLGEAE*DPASSS
Trigger: GGACGATGAGGCTGGGTCCCACTCAGCCTCGCCCAG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGATGCGCTGTGTGGGGGTaGCTGCAGGTGATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARCAVWG*LQVMCL
Trigger: GAGACACATCACCTGCAGCCACCCCCACACAGCGCA...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGTGCGCTGTGTGGGGGTaGCTGCAGGTGATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGCAVWG*LQVMCL
Trigger: GAGACACATCACCTGCAGCCACCCCCACACAGCGCA...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGGCCAAAGGAGGTCCGTaGGCTGCGCTGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTAKGGP*AALCGG
Trigger: ACCCCCACACAGCGCAGCCCACGGACCTCCTTTGGC...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCGCCAAAGGAGGTCCGTaGGCTGCGCTGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSAKGGP*AALCGG
Trigger: ACCCCCACACAGCGCAGCCCACGGACCTCCTTTGGC...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGGTCAGGGGCTGTGGCTaGCCTAGGAGGGACACGCCA +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGVRGCG*PRRDTP
Trigger: TGGCGTGTCCCTCCTAGGCCAGCCACAGCCCCTGAC...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGTCAGGGGCTGTGGCTaGCCTAGGAGGGACACGCCA +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAVRGCG*PRRDTP
Trigger: TGGCGTGTCCCTCCTAGGCCAGCCACAGCCCCTGAC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCTCCGCCACTGTTCCTaGGTCAGGGGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSLRHCS*VRGCGW
Trigger: CCAGCCACAGCCCCTGACCCAGGAACAGTGGCGGAG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTCTCCGCCACTGTTCCTaGGTCAGGGGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVLRHCS*VRGCGW
Trigger: CCAGCCACAGCCCCTGACCCAGGAACAGTGGCGGAG...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGGAGGGGCAGGGCTGTaGCCCCAGAGGTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVGGAGL*PQRLED
Trigger: ATCCTCCAACCTCTGGGGCCACAGCCCTGCCCCTCC...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGACACCTGTACAGACCTaGTTTGGGGGAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARTPVQT*FGGELP
Trigger: TGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCAAAGACGTCTTCAGATaGGGCCCTGGGGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCKDVFR*GPGEGK
Trigger: CTTGCCCTCCCCAGGGCCCCATCTGAAGACGTCTTT...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525687.5
CDS-3UTR CCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGGGAGTCGTCAAGACCTaGAGGGAGAGTAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRGVVKT*RESKAQ
Trigger: CTGAGCCTTACTCTCCCTCCAGGTCTTGACGACTCC...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531191.5
3UTR CAA 72 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTaGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLG*RWPSGQRSGAR
Trigger: TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp TCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTAGAAGAGGTACCTGCTaGGCCAGAAGAGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: SGQPRLQAGSAVGSQWEPRRGTC*ARRGGR
Trigger: ACGCCCTCCTCTTCTGGCTCAGCAGGTACCTCTTCT...AGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR TCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGTCTTCAGCACTAAGCTaGGTCCGGCTGGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWSSALS*VRLAPA
Trigger: TGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGA...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGTCCGGGACTGGGGTTTaGAGACAGGTCAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRSGTGV*RQVKGK
Trigger: TTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGA...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CTGATCATGTCCACTTTCCAGACTATAGTTGGAGACATTGATGAGGCCCTCAGCGCCAGCGCGGGCCCATaGAGCCGCCCGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LIMSTFQTIVGDIDEALSASAGP*SRPVPF
Trigger: GAAAGGCACCGGGCGGCTTCATGGGCCCGCGCTGGC...GCTGAGGGCCTCATCAATGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGATGCAGGTAATGAGATaGCGCACCCACATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGMQVMR*RTHMLR
Trigger: TCTGAGCATGTGGGTGCGTCATCTCATTACCTGCAT...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGACTCGCTCATTGAGCTaGGGGTCTCGGTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGTRSLS*GSRLRR
Trigger: GCGGCGCAACCGAGACCCTCAGCTCAATGAGCGAGT...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTACTCGCTCATTGAGCTaGGGGTCTCGGTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVTRSLS*GSRLRR
Trigger: GCGGCGCAACCGAGACCCTCAGCTCAATGAGCGAGT...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTACTCGCTCATTGAGCTaGGGGTCTCGGTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEATRSLS*GSRLRR
Trigger: GCGGCGCAACCGAGACCCTCAGCTCAATGAGCGAGT...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGTACTACTTCCCACCCTaGACAGAATCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARYYFPP*TESRDA
Trigger: AGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTA...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GCTGCACCTGCTCGAGCACGGCCTTCTGTTCCAGCAGCTCCTTGGGGCAGCAGAAATCAGCTCCTGTTTTaGCCTGCTGTCGCCGGAATT +
Preference number: 4 (lower is better)
Translates to: AAPARARPSVPAAPWGSRNQLLF*PAVAGI
Trigger: AATTCCGGCGACAGCAGGGCAAAACAGGAGCTGATT...TCTGCTGCCCCAAGGAGCTGCTGGAACAGAAGGCCGTGCTCGAGCAGGTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGTCCATGGCCCAGCTCTaGCAGCTCGAATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRSMAQL*QLESAP
Trigger: AGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGA...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR GCA 90 bp CCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATTCCATGGCCCAGCTCTaGCAGCTCGAATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSHHHLLVDLDNLVSRLDSMAQL*QLESAP
Trigger: AGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGA...ATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
CDS-3UTR GCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGCCCTCTGTCAGGCTTTaGAGGTTCTCTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSPSVRL*RFSVCS
Trigger: GCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGG...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALLEVMG*PQKSLC
Trigger: ACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAG...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCLEVMG*PQKSLC
Trigger: ACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAG...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGAATGGACTGTCCAGCTaGACCTGCTCGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWNGLSS*TCSSTA
Trigger: GGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATT...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GTGGGAACCTGGGTGTCCACTTGGGACACAAAGTGCTGGCAATTGCTGGTGGTGAATGGACTGTCCAGCTaGACCTGCTCGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: VGTWVSTWDTKCWQLLVVNGLSS*TCSSTA
Trigger: GGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATT...CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGTCTCCAGGCTGGATCTaGAGTCGGGAGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLSPGWI*SRESVG
Trigger: TCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGA...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR GCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGTCTCCAGGCTGGATCTaGAGTCGGGAGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRSPGWI*SRESVG
Trigger: TCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGA...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCATCCCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYHPTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATG...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR GCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCCATCCCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCHPTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATG...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR GCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTAGTCCCTGCTACCCCTaGTGGGAGTATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVSPCYP*WEYGWG
Trigger: CCCCCAGCCATACTCCCAGCAGGGGTAGCAGGGACT...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCCAGTGCCTCTTCACTaGTGTCTGTCAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGPVPLH*CLSESQ
Trigger: TTGGCTCTCTGACAGACAGCAGTGAAGAGGCACTGG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCAGGGACACGCCACCCTaGCTCAGCCCCCGTACCATT +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSRDTPP*LSPRTI
Trigger: AATGGTACGGGGGCTGAGGCAGGGTGGCGTGTCCCT...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CGGTTCTGCTCCTTCCACTGGCGGAACTTCTCTCCTGTCAGCTCAGGGTCACCCAGGACCTGCAGCTCCTaGAGCTTTGCCTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RFCSFHWRNFSPVSSGSPRTCSS*SFALSV
Trigger: CACACTCAAGGCAAAGCTGCAGGAGCTGCAGGTCCT...GGGTGACCCTGAGCTGACAGGAGAGAAGTTCCGCCAGTGGAAGGAGCAGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCACTTCTTCTAGGACCTaGAGCTCCTGCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLATSSRT*SSCSFA
Trigger: GGCAAAGCTGCAGGAGCTGCAGGTCCTAGAAGAAGT...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CAGACCAGGATGTTGTGGCAGATCCCAGCCACGTGGCTGCAGATCCTCAGGACTGCTCCTGTTTTGCCCTaGTGTCGCCGGAATTTCCGC +
Preference number: 4 (lower is better)
Translates to: QTRMLWQIPATWLQILRTAPVLP*CRRNFR
Trigger: GCGGAAATTCCGGCGACAGCAGGGCAAAACAGGAGC...AGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCTGCCACAACATCCTGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp TTCTTACGGGGCCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCTTTGGGGGCAGAGCTaGAGCAGGTTCTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLRGHPTTTCSLIWTTSSLWGQS*SRFLPG
Trigger: GCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAG...AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
CDS-3UTR CCA 90 bp GTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACTTGCCTTGGACTATGCTCTaGAAGTCATGGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VSRLDLQSGVSGNLGVHLPWTML*KSWVAP
Trigger: GGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGG...CAAGTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp CGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTTGGACTATGCTCTaGAAGTCATGGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: RPTGLLSGDSGSPGVPATPWTML*KSWVAP
Trigger: GGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGG...GGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp CTAGGCCCAATGGACTGTCCAGCTGCACCTGCTCGAGCACGGCCTTCTGTTCCATCCCCCAGGCAGCCTTaGACTATGCTCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LGPMDCPAAPARARPSVPSPRQP*TMLWKS
Trigger: TGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGA...TGGAACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp CGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCTCCCCCAGGCAGCCTTaGACTATGCTCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RPTGLLSGDSGSPGVPATSPRQP*TMLWKS
Trigger: TGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGA...GGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp CGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCTCCTTCTCAGCCGCTaGACCATCCTCATGCAAGAC +
Preference number: 4 (lower is better)
Translates to: RPTGLLSGDSGSPGVPATLLLSR*TILMQD
Trigger: GTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAG...GGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGCAGATCCCAGCCACGTaGCTGCAGATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGQIPAT*LQILRT
Trigger: AGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCTG...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACAGATCCCAGCCACGTaGCTGCAGATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLQIPAT*LQILRT
Trigger: AGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCTG...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525687.5
CDS-3UTR CCA 90 bp AGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGGACCGCTGGCAATTGCTGGTaGTGTGAATTTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SHVAADPQDCALLLSRWTAGNCW*CEFLGP
Trigger: TGGGCCTAGAAATTCACACCACCAGCAATTGCCAGC...GGTCCAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCACCTGGGTGTCCACTTaGGACACAAAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLATWVST*DTKCWQ
Trigger: TTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGT...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGACCTGGGTGTCCACTTaGGACACAAAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSTWVST*DTKCWQ
Trigger: TTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGT...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGGCAGTCGGGAGTCAGTaGGAACCTGGGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: VDLDNLVSRLDLQSGVSGAVGSQ*EPGCPL
Trigger: AAGTGGACACCCAGGTTCCCACTGACTCCCGACTGC...CCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGGCAGTCGGGAGTCAGTaGGAACCTGGGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLAVGSQ*EPGCPL
Trigger: AAGTGGACACCCAGGTTCCCACTGACTCCCGACTGC...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGTSSPG*ICSRES
Trigger: TGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGT...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TTACGGGGCCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LRGHPTTTCSLIWTTSSPTSSPG*ICSRES
Trigger: TGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGT...TGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
CDS-3UTR CCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTAACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLTSSPG*ICSRES
Trigger: TGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGT...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CCCAGGCAGCCTTGGACTATGCTCTGGAAGTCATGGGTTGCCCCCAGAAGTCCCACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRQPWTMLWKSWVAPRSPTCSLI*TTSSPG
Trigger: GCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT...GGGACTTCTGGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGAGTGATGGGCTCCTCTaGTGCGGGGAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGSDGLL*CGESRT
Trigger: GGTCCTGGACTCCCCGCACCAGAGGAGCCCATCACT...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGAGTGATGGGCTCCTCTaGTGCGGGGAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTSDGLL*CGESRT
Trigger: GGTCCTGGACTCCCCGCACCAGAGGAGCCCATCACT...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGCTTCAGATGGGGCCCTaGGAGACAGTGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTLQMGP*ETVGPE
Trigger: CTCTGGCCCCACTGTCTCCCAGGGCCCCATCTGAAG...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCCCTGCTACCCCTGCTaGGAGTATGGCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGPCYPC*EYGWGF
Trigger: GAACCCCCAGCCATACTCCCAGCAGGGGTAGCAGGG...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGTTCTGCTCCTTCCACTaGCGGAACTTCTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRFCSFH*RNFSPV
Trigger: GACAGGAGAGAAGTTCCGCCAGTGGAAGGAGCAGAA...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTTTCTGCTCCTTCCACTaGCGGAACTTCTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGFCSFH*RNFSPV
Trigger: GACAGGAGAGAAGTTCCGCCAGTGGAAGGAGCAGAA...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGAAGCTGGGGTTGAGGTaGCCCTCGGGTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: HHHLLVDLDNLVSRLDLQKLGLR*PSGQRS
Trigger: TGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT...CTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGGGTGTCAGGACCTTTTaGGATGGTTCTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGGVRTF*DGSSCL
Trigger: CAGGCATGAAGAACCATCCCAAAAGGTCCTGACACC...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS-3UTR TCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGCAATTGCTGGTGGTGTaGATTTCTAGGCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGQLLVV*ISRPNG
Trigger: TCCATTGGGCCTAGAAATTCACACCACCAGCAATTG...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCCACCACCTGCTCGTTaGTCTGGACAACCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGPPPAR*SGQPRL
Trigger: GAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACTCCGGGACTGGGGTTTaGAGACAGGTCAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYSGTGV*RQVKGK
Trigger: TTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGA...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTCCGGGACTGGGGTTTaGAGACAGGTCAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCSGTGV*RQVKGK
Trigger: TTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGA...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR TCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGGGTCGCCAGGCCTTTTaGTTTCTTCCGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLGRQAF*FLPTNR
Trigger: CCTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACC...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR TCA 90 bp TCAGGGGCTGTGGCTGGCCTAGGAGGGACACGCCACCCTGCCTCAGCCCCCGTAACATCATGGGTGAGCTaGAACACATATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGAVAGLGGTRHPASAPVTSWVS*NTYFFF
Trigger: GAAGAAGAAATATGTGTTTCAGCTCACCCATGATGT...TACGGGGGCTGAGGCAGGGTGGCGTGTCCCTCCTAGGCCAGCCACAGCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCCTGCAGCTTTGCCTTaGGTGTGCTCTGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGPAALP*VCSVAP
Trigger: GGGCGCTACAGAGCACACTCAAGGCAAAGCTGCAGG...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGCTCGGGGTGAGACCATaGCTAGCAGTACTACTTCCC +
Preference number: 4 (lower is better)
Translates to: HHHLLVDLDNLVSRLDLQLGVRP*LAVLLP
Trigger: GGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAG...CTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGTCCATGGCCCAGCTCTaGCAGCTCGAATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWSMAQL*QLESAP
Trigger: AGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGA...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR GCA 90 bp ATCGGGATCTTCTTCAGCACTAAGCTGAGTCCGGCTGGCTCCCGCAGCAGTTCCCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IGIFFSTKLSPAGSRSSSLEVMG*PQKSLC
Trigger: ACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAG...GGAACTGCTGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGAAGATCCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAACAGCTCCACAGCTaGACAGAGGACATCAATAGG +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGQQLHS*TEDINR
Trigger: CCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGTCGGGAGAGGGCGTCAGCTTCATaGAACAGCTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TCSLIWTTSSPGWICSRERASAS*NSSTAA
Trigger: TGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCT...CTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
CDS-3UTR GCA 90 bp TGGTGTGAATTTCTAGGCCCAATGGACTGTCCAGCTGCACCTGCTCGAGCACGGGCTGGACCATCCTCATaGAAGACCTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WCEFLGPMDCPAAPARARAGPSS*KTWLSS
Trigger: GGAGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGC...CCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTAGAAATTCACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp TTCTTACGGGGCCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTGCTGGACCATCCTCATaGAAGACCTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLRGHPTTTCSLIWTTSSAGPSS*KTWLSS
Trigger: GGAGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGC...AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
CDS-3UTR GCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCCCAGCCACGTGGCTaGAGATCCTCAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTSQPRG*RSSGLC
Trigger: GCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000531191.5
CDS-3UTR GCA 90 bp GAAGTCATGGGTTGCCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTTCTCTGTCTGTCCAGCTGCACCTaGTCGAGCACGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EVMGCPQKSLCQALQVLCLSSCT*SSTAFC
Trigger: ACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAG...ACAGAGAACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCTGTCCAGCTGCACCTaGTCGAGCACGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSLSSCT*SSTAFC
Trigger: ACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTCGTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACACTTGGGACACAAAGTaGTGGCAATTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVSRLDLQSGVSGNLGVHTWDTK*WQLLVV
Trigger: CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGT...GTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGACTTGGGACACAAAGTaGTGGCAATTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWTWDTK*WQLLVV
Trigger: CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGT...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR GCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGACTTGGGACACAAAGTaGTGGCAATTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRTWDTK*WQLLVV
Trigger: CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGT...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CATCCTCATGCAAGACCTGGCTCAGCTCCTCCAACAAGTCTCGGATCTCCTGGCTCTCCAGGCTGGATCTaGAGTCGGGAGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: HPHARPGSAPPTSLGSPGSPGWI*SRESVG
Trigger: TCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGA...GCCAGGAGATCCGAGACTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGCATCCCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRHPTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATG...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGAGCCCTGGAGTCCCTaGTACCCCTGCTGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAEPWSP*YPCWEY
Trigger: ATACTCCCAGCAGGGGTAGCAGGGACTCCAGGGCTC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGATCGTCCGGGTCCTCTaGTTCGGTCTCACTGTAGCA +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGIVRVL*FGLTVA
Trigger: TGCTACAGTGAGACCGAAGCAGAGGACCCGGACGAT...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GGGGGCCCGGCCTGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACCCAGTGCCTCTTCACTaGTGTCTGTCAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GGPAWRLVLGDAGNEMTHPVPLH*CLSESQ
Trigger: TTGGCTCTCTGACAGACAGCAGTGAAGAGGCACTGG...GTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGTACCATTCCTTCCAGTaGCTCTTCACTGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARYHSFQ*LFTAVC
Trigger: ACAGACAGCAGTGAAGAGGCACTGGAAGGAATGGTA...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGAGGACCTGCAGCTCCTaGAGCTTTGCCTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRRTCSS*SFALSV
Trigger: CACACTCAAGGCAAAGCTGCAGGAGCTGCAGGTCCT...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCACTTCTTCTAGGACCTaGAGCTCCTGCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALTSSRT*SSCSFA
Trigger: GGCAAAGCTGCAGGAGCTGCAGGTCCTAGAAGAAGT...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGCAGAGATGGGAGTaGTCTTCAGGGTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAGQRWE*SSGSEG
Trigger: GCCCTCTGACCCTGAAGAGCACTCCCATCTCTGCCC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAACAGAATCCAGGGATaGTCTGTCCTGGACACGTCA +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRNRIQG*SVLDTS
Trigger: TGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTT...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTAACAGAATCCAGGGATaGTCTGTCCTGGACACGTCA +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGNRIQG*SVLDTS
Trigger: TGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTT...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTSLPVP*PSSASS
Trigger: CGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGA...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR CCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGACCTTGGACTATGCTCTaGAAGTCATGGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARPWTML*KSWVAP
Trigger: GGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGG...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ATCCTGGGGCTGGCGGTACCAGTAGAGCGTGTGTCCCTTGAGCACAAACCAGCGTCCTCATGCAAGACCTaGCTCAGCTCCTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: ILGLAVPVERVSLEHKPASSCKT*LSSSNK
Trigger: CTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGA...CGCTGGTTTGTGCTCAAGGGACACACGCTCTACTGGTACCGCCAGCCCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACTCCTCATGCAAGACCTaGCTCAGCTCCTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYSSCKT*LSSSNK
Trigger: CTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGA...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCAGATCCCAGCCACGTaGCTGCAGATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWQIPAT*LQILRT
Trigger: AGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCTG...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000531191.5
CDS-3UTR CCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCAGACCAGGATGTTGTaGCAGATCCCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGQTRML*QIPATW
Trigger: CCACGTGGCTGGGATCTGCCACAACATCCTGGTCTG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCCAGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGAGTGCTGGCAATTGCTaGTGGTGTGAATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: SQPRGCRSSGLCPPSQPLSAGNC*WCEFLG
Trigger: GCCTAGAAATTCACACCACCAGCAATTGCCAGCACT...CAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp CCCAGGCAGCCTTGGACTATGCTCTGGAAGTCATGGGTTGCCCCCAGAAGTCCCACCTGGGTGTCCACTTaGGACACAAAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PRQPWTMLWKSWVAPRSPTWVST*DTKCWQ
Trigger: TTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGT...GGGACTTCTGGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp CGGTTCTGCTCCTTCCACTGGCGGAACTTCTCTCCTGTCAGCTCAGGGTCACCCACCTGGGTGTCCACTTaGGACACAAAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RFCSFHWRNFSPVSSGSPTWVST*DTKCWQ
Trigger: TTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGT...GGGTGACCCTGAGCTGACAGGAGAGAAGTTCCGCCAGTGGAAGGAGCAGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp AGCCAGAAGAGGAGGGCGTCAGCTTCATGCAACAGCTCCACAGCTGCACAGAGGGAGTCAGTGGGAACCTaGGTGTCCACTTGGGACACA +
Preference number: 4 (lower is better)
Translates to: SQKRRASASCNSSTAAQRESVGT*VSTWDT
Trigger: TGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTC...CCTCTGTGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCTCCTCTTCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGGCAGTCGGGAGTCAGTaGGAACCTGGGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWAVGSQ*EPGCPL
Trigger: AAGTGGACACCCAGGTTCCCACTGACTCCCGACTGC...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGTCSLI*TTSSPG
Trigger: GCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTAACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLTCSLI*TTSSPG
Trigger: GCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGAAAGACGTCTTCAGATaGGGCCCTGGGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGKDVFR*GPGRQW
Trigger: CCACTGTCTCCCAGGGCCCCATCTGAAGACGTCTTT...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGGGCTGGGTCCGGGACTaGGGTTTGAAGACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWGWVRD*GLKTGQ
Trigger: TTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCC...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTGCGCTGTGTGGGGGTaGCTGCAGGTGATGTGTCTC +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTCAVWG*LQVMCL
Trigger: GAGACACATCACCTGCAGCCACCCCCACACAGCGCA...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGAGGGATGCTCTGTCCTaGACACGTCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWRDALS*TRQKLG
Trigger: CCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATGGAGGGGCAGGGCTGTaGCCCCAGAGGTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNGGAGL*PQRLED
Trigger: ATCCTCCAACCTCTGGGGCCACAGCCCTGCCCCTCC...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGTGTACAGACCTGGTTTaGGGGAGAACTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWCTDLV*GRTAKE
Trigger: TTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACA...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGTGTACAGACCTGGTTTaGGGGAGAACTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSCTDLV*GRTAKE
Trigger: TTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACA...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCCCACCAAGACACACCTaGACAGAGCCTGTTACCTGT +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCPPRHT*TEPVTC
Trigger: ACAGGTAACAGGCTCTGTCCAGGTGTGTCTTGGTGG...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525687.5
3UTR CAA 72 bp ATGTTCTTACGGGGCCATCCCACCACCACCTGCTCGTaGATCTGGACAACCTCGTCTCCAGGCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: MFLRGHPTTTCS*IWTTSSPGWIC
Trigger: GCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAAGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
3UTR CAA 72 bp AGCTCCACAGCTGCACAGAGGACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAGCCTTGGACTATGCTC +
Preference number: 4 (lower is better)
Translates to: SSTAAQRTSIGV*AQSPRQPWTML
Trigger: GAGCATAGTCCAAGGCTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGTCCTCTGTGCAGCTGTGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR TCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCAGAAGAGGTACCTGCTaGGCCAGAAGAGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSRRGTC*ARRGGR
Trigger: ACGCCCTCCTCTTCTGGCTCAGCAGGTACCTCTTCT...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGAGAAGAGGTACCTGCTaGGCCAGAAGAGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTRRGTC*ARRGGR
Trigger: ACGCCCTCCTCTTCTGGCTCAGCAGGTACCTCTTCT...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAATTGCTGGTGGTGTaGATTTCTAGGCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGQLLVV*ISRPNG
Trigger: TCCATTGGGCCTAGAAATTCACACCACCAGCAATTG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGCCACCACCTGCTCGTTaGTCTGGACAACCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTPPPAR*SGQPRL
Trigger: GAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGG...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ATGACGCACCCACATGCTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTCTTCAGCACTAAGCTaGGTCCGGCTGGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: MTHPHAQICQGISSEDEGSSALS*VRLAPA
Trigger: TGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGA...CCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGGGTGCGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATTCCGGGACTGGGGTTTaGAGACAGGTCAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PSHHHLLVDLDNLVSRLDSGTGV*RQVKGK
Trigger: TTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGA...ATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTGGTCGCCAGGCCTTTTaGTTTCTTCCGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGGRQAF*FLPTNR
Trigger: CCTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACC...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ATCCTGGGGCTGGCGGTACCAGTAGAGCGTGTGTCCCTTGAGCACAAACCAGCGATGCAGGTAATGAGATaGCGCACCCACATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ILGLAVPVERVSLEHKPAMQVMR*RTHMLR
Trigger: TCTGAGCATGTGGGTGCGTCATCTCATTACCTGCAT...CGCTGGTTTGTGCTCAAGGGACACACGCTCTACTGGTACCGCCAGCCCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTACCTCTCAGCCAAGTTaGCACCTTTCCGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVTSQPS*HLSGGP
Trigger: TGGACCCCCGGAAAGGTGGCAACTTGGCTGAGAGGT...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR GCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGACCTCTCAGCCAAGTTaGCACCTTTCCGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTTSQPS*HLSGGP
Trigger: TGGACCCCCGGAAAGGTGGCAACTTGGCTGAGAGGT...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR GCA 90 bp GCCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTTCTCTGTCTGTAGCCTGGAGCCCTCTGTCAGGCTTTaGAGGTTCTCTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: APRSPSVRLCRFSVCSLEPSVRL*RFSVCS
Trigger: GCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGG...CTCCAGGCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCTCTGTCAGGCTTTaGAGGTTCTCTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLPSVRL*RFSVCS
Trigger: GCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGG...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp GAATTTCTAGGCCCAATGGACTGTCCAGCTGCACCTGCTCGAGCACGGCCTTCTCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EFLGPMDCPAAPARARPSLEVMG*PQKSLC
Trigger: ACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAG...AGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTAGAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTAGGCAGCCTTGGACTATaGTCTGGAAGTCATGGGTTG +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLGSLGL*SGSHGL
Trigger: CAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCC...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGGGCAGCCTTGGACTATaGTCTGGAAGTCATGGGTTG +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLGSLGL*SGSHGL
Trigger: CAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCC...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGGCAGCCTTGGACTATaGTCTGGAAGTCATGGGTTG +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARGSLGL*SGSHGL
Trigger: CAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCC...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCAACAGCTCCACAGCTaGACAGAGGACATCAATAGG +
Preference number: 4 (lower is better)
Translates to: DQQDSCQGIQGALESLLPQQLHS*TEDINR
Trigger: CCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTG...GGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTAGGGCGTCAGCTTCATaGAACAGCTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGRASAS*NSSTAA
Trigger: TGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCT...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCGCTGGACCATCCTCATaGAAGACCTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSAGPSS*KTWLSS
Trigger: GGAGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGC...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCATCCCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGHPTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ATCCTGGGGCTGGCGGTACCAGTAGAGCGTGTGTCCCTTGAGCACAAACCAGCGGATGACGCACCCACATaGTCAGATCTGTCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: ILGLAVPVERVSLEHKPADDAPT*SDLSGY
Trigger: ATACCCTGACAGATCTGAGCATGTGGGTGCGTCATC...CGCTGGTTTGTGCTCAAGGGACACACGCTCTACTGGTACCGCCAGCCCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTTACAGCTCCCGGTTCTaGTCCTTCCACTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVYSSRF*SFHWRN
Trigger: GTTCCGCCAGTGGAAGGAGCAGAACCGGGAGCTGTA...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCGGTTTGGGGGAGAACTaGCAAGGAACTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSGLGEN*QGTGGA
Trigger: TGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACC...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGTTTGGGGGAGAACTaGCAAGGAACTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAGLGEN*QGTGGA
Trigger: TGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCTGGGATGGTTCTTCATaGCTGCAAAGCTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: KLGLRWPSGQRSGARVLAWDGSS*LQSSFP
Trigger: GGGAAAAGAGCTTTGCAGGCATGAAGAACCATCCCA...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS-3UTR CCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGTCCCCCAGGCAGCCTTaGACTATGCTCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWSPRQP*TMLWKS
Trigger: TGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGA...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TTCTTACGGGGCCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCTCCTTCTCAGCCGCTaGACCATCCTCATGCAAGAC +
Preference number: 4 (lower is better)
Translates to: FLRGHPTTTCSLIWTTSSLLLSR*TILMQD
Trigger: GTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAG...AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGGCCCCGTAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
CDS-3UTR CCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCTCCTTCTCAGCCGCTaGACCATCCTCATGCAAGAC +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGLLLSR*TILMQD
Trigger: GTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGACCAGGATGTTGTaGCAGATCCCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGQTRML*QIPATW
Trigger: CCACGTGGCTGGGATCTGCCACAACATCCTGGTCTG...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACGCTGGCAATTGCTGGTaGTGTGAATTTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYAGNCW*CEFLGP
Trigger: TGGGCCTAGAAATTCACACCACCAGCAATTGCCAGC...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGTGCTGGCAATTGCTaGTGGTGTGAATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRSAGNC*WCEFLG
Trigger: GCCTAGAAATTCACACCACCAGCAATTGCCAGCACT...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGACCTGGGTGTCCACTTaGGACACAAAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLTWVST*DTKCWQ
Trigger: TTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGT...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGCAGTCGGGAGTCAGTaGGAACCTGGGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVAVGSQ*EPGCPL
Trigger: AAGTGGACACCCAGGTTCCCACTGACTCCCGACTGC...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGGGCTGGGTCCGGGACTaGGGTTTGAAGACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGGWVRD*GLKTGQ
Trigger: TTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCC...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTAAGCTGGGGTTGAGGTaGCCCTCGGGTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAKLGLR*PSGQRS
Trigger: TGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
3UTR CAA 72 bp AGTCTGTCCAGGCAGGGCTGGGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAAAGACGTCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: SLSRQGWVRDWG*KTGQRQRRLQM
Trigger: CATCTGAAGACGTCTTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCCCTGCCTGGACAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCCAATTGCTGGTGGTGTaGATTTCTAGGCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALQLLVV*ISRPNG
Trigger: TCCATTGGGCCTAGAAATTCACACCACCAGCAATTG...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCCAATTGCTGGTGGTGTaGATTTCTAGGCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCQLLVV*ISRPNG
Trigger: TCCATTGGGCCTAGAAATTCACACCACCAGCAATTG...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR TCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATTCTTCAGCACTAAGCTaGGTCCGGCTGGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNSSALS*VRLAPA
Trigger: TGCGGGAGCCAGCCGGACTCAGCTTAGTGCTGAAGA...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGTCGCCAGGCCTTTTaGTTTCTTCCGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAGRQAF*FLPTNR
Trigger: CCTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CCACATGCTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTACACAGAGCGTGTGTCCCTTaGGCACAAACCAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PHAQICQGISSEDEGFVHRACVP*AQTSGG
Trigger: GCCGCCGCTGGTTTGTGCTCAAGGGACACACGCTCT...GTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTATCAGCAGCGAAGATaGAGGGTTTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGYQQRR*RVCTHH
Trigger: ATGATGTGTACAAACCCTTCATCTTCGCTGCTGATA...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAATGCAGGTAATGAGATaGCGCACCCACATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARMQVMR*RTHMLR
Trigger: TCTGAGCATGTGGGTGCGTCATCTCATTACCTGCAT...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATGGTGCACTCGCTCATTaGGCTGAGGGTCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNGALAH*AEGLGC
Trigger: GCAACCGAGACCCTCAGCTCAATGAGCGAGTGCACC...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCTGGAAGTCATGGGTTaGCCCCAGAAGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSLEVMG*PQKSLC
Trigger: ACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGCAACAGCTCCACAGCTaGACAGAGGACATCAATAGG +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGQQLHS*TEDINR
Trigger: CCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTG...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTAGGGCGTCAGCTTCATaGAACAGCTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVRASAS*NSSTAA
Trigger: TGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCT...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTCATCCCACCACCACCTaGTCGTTGATCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVHPTTT*SLIWTT
Trigger: GGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATG...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGATGACGCACCCACATaGTCAGATCTGTCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARDDAPT*SDLSGY
Trigger: ATACCCTGACAGATCTGAGCATGTGGGTGCGTCATC...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGAGGACCTGCAGCTCCTaGAGCTTTGCCTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTRTCSS*SFALSV
Trigger: CACACTCAAGGCAAAGCTGCAGGAGCTGCAGGTCCT...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATGGGCAGAGATGGGAGTaGTCTTCAGGGTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNGQRWE*SSGSEG
Trigger: GCCCTCTGACCCTGAAGAGCACTCCCATCTCTGCCC...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAAACAGAATCCAGGGATaGTCTGTCCTGGACACGTCA +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARNRIQG*SVLDTS
Trigger: TGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTT...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCCTTGGACTATGCTCTaGAAGTCATGGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSPWTML*KSWVAP
Trigger: GGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGAAGTCTCGGATCTCCTaGCATGCTGAGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARKSRIS*HAEKSF
Trigger: AAATGATTTCTCAGCATGCCAGGAGATCCGAGACTT...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGTCCTCATGCAAGACCTaGCTCAGCTCCTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWSSCKT*LSSSNK
Trigger: CTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGA...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTCCTCATGCAAGACCTaGCTCAGCTCCTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGSSCKT*LSSSNK
Trigger: CTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGA...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTCTCCTTCTCAGCCGCTaGACCATCCTCATGCAAGAC +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEALLLSR*TILMQD
Trigger: GTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAG...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCAGTGCTGGCAATTGCTaGTGGTGTGAATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALSAGNC*WCEFLG
Trigger: GCCTAGAAATTCACACCACCAGCAATTGCCAGCACT...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGAGTCAGTGGGAACCTaGGTGTCCACTTGGGACACA +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAESVGT*VSTWDT
Trigger: TGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGGAGTCAGTGGGAACCTaGGTGTCCACTTGGGACACA +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTESVGT*VSTWDT
Trigger: TGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTC...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGGAGTCAGTGGGAACCTaGGTGTCCACTTGGGACACA +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGESVGT*VSTWDT
Trigger: TGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTC...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGTCSLI*TTSSPG
Trigger: GCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGT...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCAAAGACGTCTTCAGATaGGGCCCTGGGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSKDVFR*GPGRQW
Trigger: CCACTGTCTCCCAGGGCCCCATCTGAAGACGTCTTT...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGTGTACACATCATGGGTaGGCTGAAACACATATTTCT +
Preference number: 4 (lower is better)
Translates to: LGLRWPSGQRSGARVLARCTHHG*AETHIS
Trigger: AGAAATATGTGTTTCAGCTCACCCATGATGTGTACA...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGATGCAGGTAATGAGATaGCGCACCCACATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWMQVMR*RTHMLR
Trigger: TCTGAGCATGTGGGTGCGTCATCTCATTACCTGCAT...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGTACTACTTCCCACCCTaGACAGAATCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWYYFPP*TESRDA
Trigger: AGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTA...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGGCAGCCTTGGACTATaGTCTGGAAGTCATGGGTTG +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVGSLGL*SGSHGL
Trigger: CAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCC...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TGCTCTGGAAGTCATGGGTTGCCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTCAACAGCTCCACAGCTaGACAGAGGACATCAATAGG +
Preference number: 4 (lower is better)
Translates to: CSGSHGLPPEVPLSGFAGQQLHS*TEDINR
Trigger: CCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTG...ACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGACTTGGGACACAAAGTaGTGGCAATTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWTWDTK*WQLLVV
Trigger: CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGT...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCCAGTGCCTCTTCACTaGTGTCTGTCAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSPVPLH*CLSESQ
Trigger: TTGGCTCTCTGACAGACAGCAGTGAAGAGGCACTGG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTCCAGTGCCTCTTCACTaGTGTCTGTCAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAPVPLH*CLSESQ
Trigger: TTGGCTCTCTGACAGACAGCAGTGAAGAGGCACTGG...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGAACAGAATCCAGGGATaGTCTGTCCTGGACACGTCA +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWNRIQG*SVLDTS
Trigger: TGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTT...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CGCACCCACATGCTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTCCCCCAGGCAGCCTTaGACTATGCTCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RTHMLRSVRVSAAKMKGLSPRQP*TMLWKS
Trigger: TGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGA...CAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGGGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGGAGAAATCATTTAAGTaGGAGAAGAGGTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVREKSFK*EKRYLL
Trigger: CAGCAGGTACCTCTTCTCCCACTTAAATGATTTCTC...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTAAGTCTCGGATCTCCTaGCATGCTGAGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGKSRIS*HAEKSF
Trigger: AAATGATTTCTCAGCATGCCAGGAGATCCGAGACTT...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCCTCATGCAAGACCTaGCTCAGCTCCTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTSSCKT*LSSSNK
Trigger: CTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGA...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATCAGACCAGGATGTTGTaGCAGATCCCAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNQTRML*QIPATW
Trigger: CCACGTGGCTGGGATCTGCCACAACATCCTGGTCTG...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGGCTGGCAATTGCTGGTaGTGTGAATTTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TESRDALSWTRQKLGLRWAGNCW*CEFLGP
Trigger: TGGGCCTAGAAATTCACACCACCAGCAATTGCCAGC...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGAGTGCTGGCAATTGCTaGTGGTGTGAATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: SSDQQDSCQGIQGALESLSAGNC*WCEFLG
Trigger: GCCTAGAAATTCACACCACCAGCAATTGCCAGCACT...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp TGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACCCACATGCTCAGGCCCGGCCTGGAGACTaGTACTTGGAGATGCAGGTA +
Preference number: 4 (lower is better)
Translates to: WRLVLGDAGNEMTHPHAQARPGD*YLEMQV
Trigger: TACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGC...CTGAGCATGTGGGTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATGCCCGGCCTGGAGACTaGTACTTGGAGATGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNARPGD*YLEMQV
Trigger: TACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGC...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTTTCTGCTCCTTCCACTaGCGGAACTTCTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVFCSFH*RNFSPV
Trigger: GACAGGAGAGAAGTTCCGCCAGTGGAAGGAGCAGAA...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTTCAGAGGTCAAGATGTaGGAGCTGCCTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEASEVKM*ELPSAC
Trigger: ACAGGCTGAAGGCAGCTCCCACATCTTGACCTCTGA...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAGGTCAAGATGTaGGAGCTGCCTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTSEVKM*ELPSAC
Trigger: ACAGGCTGAAGGCAGCTCCCACATCTTGACCTCTGA...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTACACCTGTACAGACCTaGTTTGGGGGAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEATPVQT*FGGELP
Trigger: TGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp CATCCTCATGCAAGACCTGGCTCAGCTCCTCCAACAAGTCTCGGATCTCCTGGCCAATTGCTGGTGGTGTaGATTTCTAGGCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: HPHARPGSAPPTSLGSPGQLLVV*ISRPNG
Trigger: TCCATTGGGCCTAGAAATTCACACCACCAGCAATTG...GCCAGGAGATCCGAGACTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR TCA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCAATTGCTGGTGGTGTaGATTTCTAGGCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGQLLVV*ISRPNG
Trigger: TCCATTGGGCCTAGAAATTCACACCACCAGCAATTG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGACATCATGGGTGAGCTaGAACACATATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRTSWVS*NTYFFF
Trigger: GAAGAAGAAATATGTGTTTCAGCTCACCCATGATGT...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTACTACTTCCCACCCTaGACAGAATCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSYYFPP*TESRDA
Trigger: AGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTA...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCAACAGCTCCACAGCTaGACAGAGGACATCAATAGG +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSQQLHS*TEDINR
Trigger: CCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGCAACAGCTCCACAGCTaGACAGAGGACATCAATAGG +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTQQLHS*TEDINR
Trigger: CCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTG...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATAGGGCGTCAGCTTCATaGAACAGCTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNRASAS*NSSTAA
Trigger: TGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCT...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTA +
Preference number: 4 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYQSAGN*WWCEFL
Trigger: TAGAAATTCACACCACCAGCAATTGCCAGCACTTTG...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR GCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGACTTGGGACACAAAGTaGTGGCAATTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTTWDTK*WQLLVV
Trigger: CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGT...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTACACATCATGGCATGAAGCCGCCCGGTaGCTTTCGCAACAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LRSVRVSAAKMKGLYTSWHEAAR*LSQQEP
Trigger: TGGCTCCTGTTGCGAAAGGCACCGGGCGGCTTCATG...CCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGATGACGCACCCACATaGTCAGATCTGTCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVDDAPT*SDLSGY
Trigger: ATACCCTGACAGATCTGAGCATGTGGGTGCGTCATC...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGATGACGCACCCACATaGTCAGATCTGTCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEADDAPT*SDLSGY
Trigger: ATACCCTGACAGATCTGAGCATGTGGGTGCGTCATC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATTCCCCCAGGCAGCCTTaGACTATGCTCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNSPRQP*TMLWKS
Trigger: TGACTTCCAGAGCATAGTCCAAGGCTGCCTGGGGGA...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGCTGGCAATTGCTGGTaGTGTGAATTTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVAGNCW*CEFLGP
Trigger: TGGGCCTAGAAATTCACACCACCAGCAATTGCCAGC...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATGAGTCAGTGGGAACCTaGGTGTCCACTTGGGACACA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNESVGT*VSTWDT
Trigger: TGTGTCCCAAGTGGACACCCAGGTTCCCACTGACTC...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTTGTACAGACCTGGTTTaGGGGAGAACTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVCTDLV*GRTAKE
Trigger: TTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACA...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATTCCGGGACTGGGGTTTaGAGACAGGTCAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNSGTGV*RQVKGK
Trigger: TTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGA...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGTATCAGCAGCGAAGATaGAGGGTTTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRYQQRR*RVCTHH
Trigger: ATGATGTGTACAAACCCTTCATCTTCGCTGCTGATA...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGGTGCACTCGCTCATTaGGCTGAGGGTCTCGGTTGC +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELGALAH*AEGLGC
Trigger: GCAACCGAGACCCTCAGCTCAATGAGCGAGTGCACC...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGCCTGCAGCTTTGCCTTaGGTGTGCTCTGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELPAALP*VCSVAP
Trigger: GGGCGCTACAGAGCACACTCAAGGCAAAGCTGCAGG...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACCCACATGCTCAGCCCTCTGTCAGGCTTTaGAGGTTCTCTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: WRLVLGDAGNEMTHPHAQPSVRL*RFSVCS
Trigger: GCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGG...CTGAGCATGTGGGTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATCCCTCTGTCAGGCTTTaGAGGTTCTCTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNPSVRL*RFSVCS
Trigger: GCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGG...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATGGCAGCCTTGGACTATaGTCTGGAAGTCATGGGTTG +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNGSLGL*SGSHGL
Trigger: CAACCCATGACTTCCAGAGCATAGTCCAAGGCTGCC...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGCAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTA +
Preference number: 4 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGQSAGN*WWCEFL
Trigger: TAGAAATTCACACCACCAGCAATTGCCAGCACTTTG...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTACACATCATGGGTGTCTCCAGGCTGGATCTaGAGTCGGGAGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: RSVRVSAAKMKGLYTSWVSPGWI*SRESVG
Trigger: TCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGA...CACCCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTTACCATTCCTTCCAGTaGCTCTTCACTGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVYHSFQ*LFTAVC
Trigger: ACAGACAGCAGTGAAGAGGCACTGGAAGGAATGGTA...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTACCATTCCTTCCAGTaGCTCTTCACTGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTYHSFQ*LFTAVC
Trigger: ACAGACAGCAGTGAAGAGGCACTGGAAGGAATGGTA...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGCTTTGGGGGCAGAGCTaGAGCAGGTTCTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELLWGQS*SRFLPG
Trigger: GCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAG...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTAGAGAAATCATTTAAGTaGGAGAAGAGGTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLEKSFK*EKRYLL
Trigger: CAGCAGGTACCTCTTCTCCCACTTAAATGATTTCTC...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAAAGTCTCGGATCTCCTaGCATGCTGAGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARKSRIS*HAEKSF
Trigger: AAATGATTTCTCAGCATGCCAGGAGATCCGAGACTT...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTAAAGTCTCGGATCTCCTaGCATGCTGAGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: SDQQDSCQGIQGALESLLKSRIS*HAEKSF
Trigger: AAATGATTTCTCAGCATGCCAGGAGATCCGAGACTT...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATACCTGGGTGTCCACTTaGGACACAAAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNTWVST*DTKCWQ
Trigger: TTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGT...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTGATCATGTCCACTTTCCAGACTATAGTTGGAGACATTGATGAGGCCCTCAGCACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LIMSTFQTIVGDIDEALSTSSPG*ICSRES
Trigger: TGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGT...GCTGAGGGCCTCATCAATGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGTGTACACATCATGGGTaGGCTGAAACACATATTTCT +
Preference number: 4 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRCTHHG*AETHIS
Trigger: AGAAATATGTGTTTCAGCTCACCCATGATGTGTACA...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATATGCAGGTAATGAGATaGCGCACCCACATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNMQVMR*RTHMLR
Trigger: TCTGAGCATGTGGGTGCGTCATCTCATTACCTGCAT...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATAATCAGCTCCTGTTTTaGCCTGCTGTCGCCGGAATT +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNNQLLF*PAVAGI
Trigger: AATTCCGGCGACAGCAGGGCAAAACAGGAGCTGATT...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361530.11
CDS-3UTR GCA 90 bp TGCTCTGGAAGTCATGGGTTGCCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTCAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTA +
Preference number: 4 (lower is better)
Translates to: CSGSHGLPPEVPLSGFAGQSAGN*WWCEFL
Trigger: TAGAAATTCACACCACCAGCAATTGCCAGCACTTTG...ACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR GCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGTACAGCTCCCGGTTCTaGTCCTTCCACTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELYSSRF*SFHWRN
Trigger: GTTCCGCCAGTGGAAGGAGCAGAACCGGGAGCTGTA...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTACACATCATGGCCTTGGACTATGCTCTaGAAGTCATGGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LRSVRVSAAKMKGLYTSWPWTML*KSWVAP
Trigger: GGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGG...CCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp TGGTGTGAATTTCTAGGCCCAATGGACTGTCCAGCTGCACCTGCTCGAGCACGGAAGTCTCGGATCTCCTaGCATGCTGAGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: WCEFLGPMDCPAAPARARKSRIS*HAEKSF
Trigger: AAATGATTTCTCAGCATGCCAGGAGATCCGAGACTT...CCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGGCCTAGAAATTCACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATTGTACAGACCTGGTTTaGGGGAGAACTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNCTDLV*GRTAKE
Trigger: TTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACA...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGGTCGCCAGGCCTTTTaGTTTCTTCCGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELGRQAF*FLPTNR
Trigger: CCTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACC...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTTATCAGCAGCGAAGATaGAGGGTTTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVYQQRR*RVCTHH
Trigger: ATGATGTGTACAAACCCTTCATCTTCGCTGCTGATA...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTATCAGCAGCGAAGATaGAGGGTTTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTYQQRR*RVCTHH
Trigger: ATGATGTGTACAAACCCTTCATCTTCGCTGCTGATA...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGCTCGGGGTGAGACCATaGCTAGCAGTACTACTTCCC +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELLGVRP*LAVLLP
Trigger: GGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAG...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATATGAGGCCACTGAGTTaGGAAGCAGGAAAGTATAGG +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNMRPLS*EAGKYR
Trigger: CCTATACTTTCCTGCTTCTCAACTCAGTGGCCTCAT...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS-3UTR GCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGAGGGCGTCAGCTTCATaGAACAGCTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELRASAS*NSSTAA
Trigger: TGCAGCTGTGGAGCTGTTGCATGAAGCTGACGCCCT...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTCAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTA +
Preference number: 4 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAQSAGN*WWCEFL
Trigger: TAGAAATTCACACCACCAGCAATTGCCAGCACTTTG...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTA +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSQSAGN*WWCEFL
Trigger: TAGAAATTCACACCACCAGCAATTGCCAGCACTTTG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGCCTTGGACTATGCTCTaGAAGTCATGGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELPWTML*KSWVAP
Trigger: GGGGGCAACCCATGACTTCCAGAGCATAGTCCAAGG...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGAAATCATTTAAGTaGGAGAAGAGGTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVEKSFK*EKRYLL
Trigger: CAGCAGGTACCTCTTCTCCCACTTAAATGATTTCTC...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp GCGTCAGCTTCATGCAACAGCTCCACAGCTGCACAGAGGACATCAATAGGGGTCGAGAAATCATTTAAGTaGGAGAAGAGGTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASASCNSSTAAQRTSIGVEKSFK*EKRYLL
Trigger: CAGCAGGTACCTCTTCTCCCACTTAAATGATTTCTC...GACCCCTATTGATGTCCTCTGTGCAGCTGTGGAGCTGTTGCATGAAGCTGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGAAGTCTCGGATCTCCTaGCATGCTGAGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGKSRIS*HAEKSF
Trigger: AAATGATTTCTCAGCATGCCAGGAGATCCGAGACTT...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp CTGATCATGTCCACTTTCCAGACTATAGTTGGAGACATTGATGAGGCCCTCAGCTTCTGCTCCTTCCACTaGCGGAACTTCTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LIMSTFQTIVGDIDEALSFCSFH*RNFSPV
Trigger: GACAGGAGAGAAGTTCCGCCAGTGGAAGGAGCAGAA...GCTGAGGGCCTCATCAATGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp CTGATCATGTCCACTTTCCAGACTATAGTTGGAGACATTGATGAGGCCCTCAGCACACCTGTACAGACCTaGTTTGGGGGAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LIMSTFQTIVGDIDEALSTPVQT*FGGELP
Trigger: TGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT...GCTGAGGGCCTCATCAATGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCACATCATGGGTGAGCTaGAACACATATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSTSWVS*NTYFFF
Trigger: GAAGAAGAAATATGTGTTTCAGCTCACCCATGATGT...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp AAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGACATCATGGGTGAGCTaGAACACATATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KNTCTDLVWGRTAKELEGTSWVS*NTYFFF
Trigger: GAAGAAGAAATATGTGTTTCAGCTCACCCATGATGT...CCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTGTACACATCATGGGTaGGCTGAAACACATATTTCT +
Preference number: 4 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTCTHHG*AETHIS
Trigger: AGAAATATGTGTTTCAGCTCACCCATGATGTGTACA...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR TCA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTTGTACACATCATGGGTaGGCTGAAACACATATTTCT +
Preference number: 4 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVCTHHG*AETHIS
Trigger: AGAAATATGTGTTTCAGCTCACCCATGATGTGTACA...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR GCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGACTTCTTCTAGGACCTaGAGCTCCTGCAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELTSSRT*SSCSFA
Trigger: GGCAAAGCTGCAGGAGCTGCAGGTCCTAGAAGAAGT...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGTCAGAGGTCAAGATGTaGGAGCTGCCTTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELSEVKM*ELPSAC
Trigger: ACAGGCTGAAGGCAGCTCCCACATCTTGACCTCTGA...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGACACCTGTACAGACCTaGTTTGGGGGAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELTPVQT*FGGELP
Trigger: TGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATGAGAAATCATTTAAGTaGGAGAAGAGGTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: SARGETMTSSTTSHPEQNEKSFK*EKRYLL
Trigger: CAGCAGGTACCTCTTCTCCCACTTAAATGATTTCTC...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CCA 90 bp TGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACCCACATGCTCAGGAGAAATCATTTAAGTaGGAGAAGAGGTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: WRLVLGDAGNEMTHPHAQEKSFK*EKRYLL
Trigger: CAGCAGGTACCTCTTCTCCCACTTAAATGATTTCTC...CTGAGCATGTGGGTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CCA 90 bp AGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTACACATCATGGGTGAGTGCTGGCAATTGCTaGTGGTGTGAATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: RSVRVSAAKMKGLYTSWVSAGNC*WCEFLG
Trigger: GCCTAGAAATTCACACCACCAGCAATTGCCAGCACT...CACCCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR TCA 90 bp TGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACCCACATGCTCAGACATCATGGGTGAGCTaGAACACATATTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WRLVLGDAGNEMTHPHAQTSWVS*NTYFFF
Trigger: GAAGAAGAAATATGTGTTTCAGCTCACCCATGATGT...CTGAGCATGTGGGTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CCA 90 bp GAAGGGTTTGTACACATCATGGGTGAGCTGAAACACATATTTCTTCTTCTGATCACCTGGGTGTCCACTTaGGACACAAAGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: EGFVHIMGELKHIFLLLITWVST*DTKCWQ
Trigger: TTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGT...GATCAGAAGAAGAAATATGTGTTTCAGCTCACCCATGATGTGTACAAACCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR TCA 90 bp CTGATCATGTCCACTTTCCAGACTATAGTTGGAGACATTGATGAGGCCCTCAGCTGTACACATCATGGGTaGGCTGAAACACATATTTCT +
Preference number: 4 (lower is better)
Translates to: LIMSTFQTIVGDIDEALSCTHHG*AETHIS
Trigger: AGAAATATGTGTTTCAGCTCACCCATGATGTGTACA...GCTGAGGGCCTCATCAATGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR GCA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGATGGTTCTTCATGCCTaGAAAGCTCTTTTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELMVLHA*KALFPL
Trigger: TAGAGGGAAAAGAGCTTTGCAGGCATGAAGAACCAT...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS-3UTR CCA 90 bp GAAGGGTTTGTACACATCATGGGTGAGCTGAAACACATATTTCTTCTTCTGATCGCTGGCAATTGCTGGTaGTGTGAATTTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EGFVHIMGELKHIFLLLIAGNCW*CEFLGP
Trigger: TGGGCCTAGAAATTCACACCACCAGCAATTGCCAGC...GATCAGAAGAAGAAATATGTGTTTCAGCTCACCCATGATGTGTACAAACCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR GCA 90 bp GAAGGGTTTGTACACATCATGGGTGAGCTGAAACACATATTTCTTCTTCTGATCCAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCTA +
Preference number: 4 (lower is better)
Translates to: EGFVHIMGELKHIFLLLIQSAGN*WWCEFL
Trigger: TAGAAATTCACACCACCAGCAATTGCCAGCACTTTG...GATCAGAAGAAGAAATATGTGTTTCAGCTCACCCATGATGTGTACAAACCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CAA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGCAGAGCCTCGAGGCTTaGGGGGCAGAGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGQSLEA*GAELEQ
Trigger: CTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTG...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp AAGCCGCCCGGTGCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCGGGTCGCCAGGCCTTTaGATTTCTTCCGACCAACAG +
Preference number: 5 (lower is better)
Translates to: KPPGAFRNRSQPSQSGRPGSPGL*ISSDQQ
Trigger: CTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACCC...GGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGCACCGGGCGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CAA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAGAGCCTCGAGGCTTaGGGGGCAGAGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGQSLEA*GAELEQ
Trigger: CTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTG...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp GTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGCAGAGCCTCGAGGCTTaGGGGGCAGAGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VLDTSEAGVEVALGSKVRQSLEA*GAELEQ
Trigger: CTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTG...CCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp GCCTTTCGCAACAGGAGCCAGCCGTCACAGTCCGGCCGGCCCAGCTCACGGCATCGACCAACAGGACTCTaGTCAGGGGATTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: AFRNRSQPSQSGRPSSRHRPTGL*SGDSGS
Trigger: GCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG...ATGCCGTGAGCTGGGCCGGCCGGACTGTGACGGCTGGCTCCTGTTGCGAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CAA 90 bp CGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCAGAGCCTCGAGGCTTaGGGGGCAGAGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: RPTGLLSGDSGSPGVPATQSLEA*GAELEQ
Trigger: CTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTG...GGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS GCA 90 bp CAGCCAGAGCCTCGAGGCTTTGGGGGCAGAGCTGGAGCAGGTTCTTaGCAGGCAGCTGCCAGTCCTCAAAGGGATAGTCCTGCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: QPEPRGFGGRAGAGS*QAAASPQRDSPAGS
Trigger: ACTCCCTGCAGGACTATCCCTTTGAGGACTGGCAGCTGCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000465415.1
ENST00000480348.6
ENST00000481077.6
ENST00000482227.5
ENST00000525687.5
ENST00000531191.5
CDS CCA 90 bp AGCCTCATCGTCCGGGTCCTCTGCTTCGGTCTCACTGTAGCAGTCTaGGGTGAGGAGCAGCAGTGGGTTTTTGGGAGGCCAGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: SLIVRVLCFGLTVAV*GEEQQWVFGRPGSG
Trigger: GCCACTCCCTGGCCTCCCAAAAACCCACTGCTGCTCCTCACCCCAGACTGCTACAGTGAGACCGAAGCAGAGGACCCGGACGATGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484874.2
CDS-3UTR CAA 90 bp CCATCCCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCAGAGCCTCGAGGCTTaGGGGGCAGAGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: PSHHHLLVDLDNLVSRLDQSLEA*GAELEQ
Trigger: CTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTG...ATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481077.6
ENST00000482227.5
CDS-3UTR CAA 90 bp CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGTCTGGAAGTCATGGGTaGCCCCCAGAAGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LGLRWPSGQRSGARVLARSGSHG*PPEVPL
Trigger: CAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGA...CCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS GCA 90 bp ACCTTTCCGGGGGTCCAGGTCTCTACCGGTTCCATGGCCCAGCTCTaGCAGCTCGAATCAGCTCCTGTTTTGCCCTGCTGTCGCCGGAAT +
Preference number: 5 (lower is better)
Translates to: TFPGVQVSTGSMAQL*QLESAPVLPCCRRN
Trigger: ATTCCGGCGACAGCAGGGCAAAACAGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGACCTGGACCCCCGGAAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000480348.6
ENST00000481077.6
CDS CCA 90 bp GCCAAGTTGCCACCTTTCCGGGGGTCCAGGTCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCGAATCAGCTCCTGTTTTGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: AKLPPFRGSRSLPVP*PSSASSNQLLFCPA
Trigger: AGCAGGGCAAAACAGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGACCTGGACCCCCGGAAAGGTGGCAACTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000465415.1
ENST00000480348.6
CDS CCA 90 bp CGCACCACCACCTGCTCGTTGATCTGGACAACCTCGTCTCCAGGCTaGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACTTGG +
Preference number: 5 (lower is better)
Translates to: RTTTCSLIWTTSSPG*ICSRESVGTWVSTW
Trigger: CCAAGTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374253.9
CDS-3UTR CAA 90 bp TCCCAGCCACGTGGCTGCAGATCCTCAGGACTGTGCCCTCCTTCTCAGCCGCTGGAATCAGCTCCTGTTTaGCCCTGCTGTCGCCGGAAT +
Preference number: 5 (lower is better)
Translates to: SQPRGCRSSGLCPPSQPLESAPV*PCCRRN
Trigger: ATTCCGGCGACAGCAGGGCAAAACAGGAGCTGATTC...CAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CAA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGGACCTCTCAGCCAAGTaGCCACCTTTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRDLSAK*PPFRGS
Trigger: GGACCCCCGGAAAGGTGGCAACTTGGCTGAGAGGTC...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR CAA 90 bp CTCGTCTCCAGGCTGGATCTGCAGTCGGGAGTCAGTGGGAACCTGGGTGTCCACTCTGGAAGTCATGGGTaGCCCCCAGAAGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LVSRLDLQSGVSGNLGVHSGSHG*PPEVPL
Trigger: CAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGA...GTGGACACCCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTGGAGACGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CAA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSTSIGV*AQSPRQ
Trigger: CTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGT...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGCGACCAACAGGACTCTaGTCAGGGGATTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSRPTGL*SGDSGS
Trigger: GCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGCGACCAACAGGACTCTaGTCAGGGGATTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWRPTGL*SGDSGS
Trigger: GCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CAA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGGGGTCGCCAGGCCTTTaGATTTCTTCCGACCAACAG +
Preference number: 5 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGGSPGL*ISSDQQ
Trigger: CTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACCC...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGCTGTACAGACCTGGTTaGGGGGAGAACTGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGLYRPG*GENCQG
Trigger: TCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAG...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS GCA 90 bp TTACGGGGCCATCCCACCATGTCCCTCTCCTCACGCACCACCACCTaGTCGTTGATCTGGACAACCTCGTCTCCAGGCTGGATCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LRGHPTMSLSSRTTT*SLIWTTSSPGWICS
Trigger: ACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGCGTGAGGAGAGGGACATGGTGGGATGGCCCCGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374253.9
CDS CCA 90 bp GAGTCGTCAAGACCTTTCCGGGGGTCCAGGTCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCGAATCAGCTCCTGTTTTGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: ESSRPFRGSRSLPVP*PSSASSNQLLFCPA
Trigger: AGCAGGGCAAAACAGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGACCTGGACCCCCGGAAAGGTCTTGACGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CAA 90 bp ACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTCAGAGCCTCGAGGCTTaGGGGGCAGAGCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: TLNRIQGCSVLDTSEAGVQSLEA*GAELEQ
Trigger: CTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTG...AACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTCTGGAAGTCATGGGTaGCCCCCAGAAGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LPTNRTLVRGFREPWSPCSGSHG*PPEVPL
Trigger: CAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGA...GCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CAA 90 bp CTGTGCCCTCCTTCTCAGCCGCTGGACCATCCTCATGCAAGACCTGGCTCAGCTACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LCPPSQPLDHPHARPGSATSIGV*AQSPRQ
Trigger: CTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGT...AGCTGAGCCAGGTCTTGCATGAGGATGGTCCAGCGGCTGAGAAGGAGGGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CAA 90 bp TCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGACCACCACCTGCTCGTaGATCTGGACAACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: SRDALSWTRQKLGLRWPSTTTCS*IWTTSS
Trigger: AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGT...CGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp AAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: KLGLRWPSGQRSGARVLAVRDWG*KTGQRQ
Trigger: TTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGAC...GGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp AGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCCTGCTGGGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: RTLVRGFREPWSPCYPCWVRDWG*KTGQRQ
Trigger: TTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGAC...CCAGCAGGGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CAA 90 bp AGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTGGGTCGCCAGGCCTTTaGATTTCTTCCGACCAACAG +
Preference number: 5 (lower is better)
Translates to: RDALSWTRQKLGLRWPSGGSPGL*ISSDQQ
Trigger: CTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACCC...ACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCGTCAGAAGCTGGGGTaGAGGTGGCCCTCGGGTCAA +
Preference number: 5 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGRQKLG*RWPSGQ
Trigger: TTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS CCA 90 bp CTCTGCTTCGGTCTCACTGTAGCAGTCTGGGGTGAGGAGCAGCAGTaGGTTTTTGGGAGGCCAGGGAGTGGCCTAGGGCATTTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: LCFGLTVAVWGEEQQ*VFGRPGSGLGHLSS
Trigger: GGAACTCAAATGCCCTAGGCCACTCCCTGGCCTCCCAAAAACCCACTGCTGCTCCTCACCCCAGACTGCTACAGTGAGACCGAAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484874.2
CDS CCA 90 bp CTGCCAGTCCTCAAAGGGATAGTCCTGCAGGGAGTCGTCAAGACCTaGAGGGAGAGTAAGGCTCAGCTCGGGGAAGCAGAGGTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LPVLKGIVLQGVVKT*RESKAQLGEAEVSG
Trigger: TCCTGACACCTCTGCTTCCCCGAGCTGAGCCTTACTCTCCCTCCAGGTCTTGACGACTCCCTGCAGGACTATCCCTTTGAGGACTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS-3UTR CAA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGGACCTCTCAGCCAAGTaGCCACCTTTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTDLSAK*PPFRGS
Trigger: GGACCCCCGGAAAGGTGGCAACTTGGCTGAGAGGTC...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR CAA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGACCTCTCAGCCAAGTaGCCACCTTTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEADLSAK*PPFRGS
Trigger: GGACCCCCGGAAAGGTGGCAACTTGGCTGAGAGGTC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR CAA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGATCTGGAAGTCATGGGTaGCCCCCAGAAGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARSGSHG*PPEVPL
Trigger: CAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGA...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGTCTGGAAGTCATGGGTaGCCCCCAGAAGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRSGSHG*PPEVPL
Trigger: CAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGA...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSDQQDSCQGIQGALESLTSIGV*AQSPRQ
Trigger: CTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGT...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000525687.5
CDS-3UTR CAA 90 bp GACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCCAACCTGGGTGTCCACTaGGGACACAAAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: DQQDSCQGIQGALESLLPNLGVH*GHKVLA
Trigger: TGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTT...GGGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CAA 90 bp GGGGGCCCGGCCTGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACAACCTGGGTGTCCACTaGGGACACAAAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GGPAWRLVLGDAGNEMTHNLGVH*GHKVLA
Trigger: TGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTT...GTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CAA 90 bp CCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACACCACCACCTGCTCGTaGATCTGGACAACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: PTNRTLVRGFREPWSPCYTTTCS*IWTTSS
Trigger: AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGT...GTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CAA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALVRDWG*KTGQRQ
Trigger: TTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGAC...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGAGGGGCAGGCGACCAACAGGACTCTaGTCAGGGGATTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: TPVQTWFGGELPRNWRGRRPTGL*SGDSGS
Trigger: GCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG...CCTGCCCCTCCAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp TCTTCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCGACCAACAGGACTCTaGTCAGGGGATTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSDQQDSCQGIQGALESLRPTGL*SGDSGS
Trigger: GCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG...CAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CAA 90 bp ATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCGCCAGGCCTTTaGATTTCTTCCGACCAACAG +
Preference number: 5 (lower is better)
Translates to: IQGCSVLDTSEAGVEVALGSPGL*ISSDQQ
Trigger: CTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACCC...GAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTACCGGGTCGCCAGGCCTTTaGATTTCTTCCGACCAACAG +
Preference number: 5 (lower is better)
Translates to: RPTGLLSGDSGSPGVPATGSPGL*ISSDQQ
Trigger: CTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACCC...GGTAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CAA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGGCGAAGATGAAGGGTTaGTACACATCATGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGAKMKG*YTSWVS
Trigger: GCTCACCCATGATGTGTACAAACCCTTCATCTTCGC...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGCGTCAGAAGCTGGGGTaGAGGTGGCCCTCGGGTCAA +
Preference number: 5 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTRQKLG*RWPSGQ
Trigger: TTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACG...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTCGTCAGAAGCTGGGGTaGAGGTGGCCCTCGGGTCAA +
Preference number: 5 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEARQKLG*RWPSGQ
Trigger: TTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACG...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAAACCTGGGTGTCCACTaGGGACACAAAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARNLGVH*GHKVLA
Trigger: TGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTT...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGAACCTGGGTGTCCACTaGGGACACAAAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGNLGVH*GHKVLA
Trigger: TGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTT...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAACCACCACCTGCTCGTaGATCTGGACAACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: TRQKLGLRWPSGQRSGARTTTCS*IWTTSS
Trigger: AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGT...TCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGACCACCACCTGCTCGTaGATCTGGACAACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGTTTCS*IWTTSS
Trigger: AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGT...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp TCCGACCAACAGGACTCTTGTCAGGGGATTCAGGGAGCCCTGGAGTCCCTGCTAACCACCACCTGCTCGTaGATCTGGACAACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: SDQQDSCQGIQGALESLLTTTCS*IWTTSS
Trigger: AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGT...TAGCAGGGACTCCAGGGCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482227.5
ENST00000525687.5
ENST00000528281.5
CDS-3UTR CAA 90 bp CCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: PTLNRIQGCSVLDTSEAGVRDWG*KTGQRQ
Trigger: TTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGAC...CCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTCGACCAACAGGACTCTaGTCAGGGGATTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGRPTGL*SGDSGS
Trigger: GCTCCCTGAATCCCCTGACAAGAGTCCTGTTGGTCG...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGGAATCAGCTCCTGTTTaGCCCTGCTGTCGCCGGAAT +
Preference number: 5 (lower is better)
Translates to: TESRDALSWTRQKLGLRWESAPV*PCCRRN
Trigger: ATTCCGGCGACAGCAGGGCAAAACAGGAGCTGATTC...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361530.11
CDS-3UTR CAA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTTSIGV*AQSPRQ
Trigger: CTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGT...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp GTGGGAACCTGGGTGTCCACTTGGGACACAAAGTGCTGGCAATTGCTGGTGGTGAACCTGGGTGTCCACTaGGGACACAAAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: VGTWVSTWDTKCWQLLVVNLGVH*GHKVLA
Trigger: TGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTT...CACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CAA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGAACCTGGGTGTCCACTaGGGACACAAAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: TESRDALSWTRQKLGLRWNLGVH*GHKVLA
Trigger: TGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTT...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp GCTCTGGAAGTCATGGGTTGCCCCCAGAAGTCCCTCTGTCAGGCTTTGCAGGTTACCACCACCTGCTCGTaGATCTGGACAACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: ALEVMGCPQKSLCQALQVTTTCS*IWTTSS
Trigger: AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGT...AACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS-3UTR CAA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGGGGTCGCCAGGCCTTTaGATTTCTTCCGACCAACAG +
Preference number: 5 (lower is better)
Translates to: TESRDALSWTRQKLGLRWGSPGL*ISSDQQ
Trigger: CTGTTGGTCGGAAGAAATCAAAAGGCCTGGCGACCC...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ATGACGCACCCACATGCTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MTHPHAQICQGISSEDEGTSIGV*AQSPRQ
Trigger: CTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGT...CCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGGGTGCGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482227.5
CDS-3UTR CAA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGAACCTGGGTGTCCACTaGGGACACAAAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTNLGVH*GHKVLA
Trigger: TGCCAGCACTTTGTGTCCCAAGTGGACACCCAGGTT...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAVRDWG*KTGQRQ
Trigger: TTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGAC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGCTGTACAGACCTGGTTaGGGGGAGAACTGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTLYRPG*GENCQG
Trigger: TCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAG...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTCTGTACAGACCTGGTTaGGGGGAGAACTGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEALYRPG*GENCQG
Trigger: TCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAG...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATTCTGGAAGTCATGGGTaGCCCCCAGAAGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SARGETMTSSTTSHPEQNSGSHG*PPEVPL
Trigger: CAGAGGGACTTCTGGGGGCAACCCATGACTTCCAGA...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGGCGAAGATGAAGGGTTaGTACACATCATGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: TESRDALSWTRQKLGLRWAKMKG*YTSWVS
Trigger: GCTCACCCATGATGTGTACAAACCCTTCATCTTCGC...CCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTAGGTGTCAGGACCTTTaGGGATGGTTCTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: HPEQNPGMLCPGHVRSWGRCQDL*GWFFMP
Trigger: AGGCATGAAGAACCATCCCAAAAGGTCCTGACACCT...ACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS-3UTR CAA 90 bp GCAGTACTACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGGCGAAGATGAAGGGTTaGTACACATCATGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AVLLPTLNRIQGCSVLDTAKMKG*YTSWVS
Trigger: GCTCACCCATGATGTGTACAAACCCTTCATCTTCGC...CGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGTAGTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGCGAAGATGAAGGGTTaGTACACATCATGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAAKMKG*YTSWVS
Trigger: GCTCACCCATGATGTGTACAAACCCTTCATCTTCGC...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCTCCTGGAGACTGGTACTaGGAGATGCAGGTAATGAGA +
Preference number: 5 (lower is better)
Translates to: LPTLNRIQGCSVLDTSEAPGDWY*EMQVMR
Trigger: TCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGG...AGCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCCCTGGAGACTGGTACTaGGAGATGCAGGTAATGAGA +
Preference number: 5 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSPGDWY*EMQVMR
Trigger: TCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGG...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp TCAGCTCGGGGTGAGACCATGACTAGCAGTACTACTTCCCACCCTGAACAGAATCTGTACAGACCTGGTTaGGGGGAGAACTGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: SARGETMTSSTTSHPEQNLYRPG*GENCQG
Trigger: TCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAG...ATTCTGTTCAGGGTGGGAAGTAGTACTGCTAGTCATGGTCTCACCCCGAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CAGGGATGCTCTGTCCTGGACACGTCAGAAGCTGGGGTTGAGGTGGCCCTCGGGATTGACTTTATTTGGTaGGAAAGTAGCCCTCATGTA +
Preference number: 5 (lower is better)
Translates to: QGCSVLDTSEAGVEVALGIDFIW*ESSPHV
Trigger: TACATGAGGGCTACTTTCCAACCAAATAAAGTCAAT...CCCGAGGGCCACCTCAACCCCAGCTTCTGACGTGTCCAGGACAGAGCATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR CAA 90 bp ATGACGCACCCACATGCTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGCCTGGAGACTGGTACTaGGAGATGCAGGTAATGAGA +
Preference number: 5 (lower is better)
Translates to: MTHPHAQICQGISSEDEGPGDWY*EMQVMR
Trigger: TCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGG...CCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAGCATGTGGGTGCGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CAA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGACATCAATAGGGGTCTaGGCACAGTCCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELTSIGV*AQSPRQ
Trigger: CTGCCTGGGGGACTGTGCCAAGACCCCTATTGATGT...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp CTCAGATCTGTCAGGGTATCAGCAGCGAAGATGAAGGGTTTGTACACATCATGGACCACCACCTGCTCGTaGATCTGGACAACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: LRSVRVSAAKMKGLYTSWTTTCS*IWTTSS
Trigger: AGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGT...CCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCCTGACAGATCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CAA 90 bp TGGAGACTGGTACTTGGAGATGCAGGTAATGAGATGACGCACCCACATGCTCAGCCTGGAGACTGGTACTaGGAGATGCAGGTAATGAGA +
Preference number: 5 (lower is better)
Translates to: WRLVLGDAGNEMTHPHAQPGDWY*EMQVMR
Trigger: TCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGG...CTGAGCATGTGGGTGCGTCATCTCATTACCTGCATCTCCAAGTACCAGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS-3UTR CAA 90 bp CTGATCATGTCCACTTTCCAGACTATAGTTGGAGACATTGATGAGGCCCTCAGCGCGAAGATGAAGGGTTaGTACACATCATGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LIMSTFQTIVGDIDEALSAKMKG*YTSWVS
Trigger: GCTCACCCATGATGTGTACAAACCCTTCATCTTCGC...GCTGAGGGCCTCATCAATGTCTCCAACTATAGTCTGGAAAGTGGACATGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482227.5
ENST00000528281.5
CDS CCA 90 bp TCTCCTGGCATGCTGAGAAATCATTTAAGTGGGAGAAGAGGTACCTaGCAGGGGAAGAATAGCACAGTGGTTAAGGGACTATGCTTAACC +
Preference number: 5 (lower is better)
Translates to: SPGMLRNHLSGRRGT*QGKNSTVVKGLCLT
Trigger: GGTTAAGCATAGTCCCTTAACCACTGTGCTATTCTTCCCCTGCCAGGTACCTCTTCTCCCACTTAAATGATTTCTCAGCATGCCAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524529.6
CDS-3UTR CAA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGCCTGGAGACTGGTACTaGGAGATGCAGGTAATGAGA +
Preference number: 5 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELPGDWY*EMQVMR
Trigger: TCTCATTACCTGCATCTCCAAGTACCAGTCTCCAGG...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
ENST00000531191.5
CDS-3UTR CAA 90 bp ACTTCCCACCCTGAACAGAATCCAGGGATGCTCTGTCCTGGACACGTCAGAAGCATTGACTTTATTTGGTaGGAAAGTAGCCCTCATGTA +
Preference number: 5 (lower is better)
Translates to: TSHPEQNPGMLCPGHVRSIDFIW*ESSPHV
Trigger: TACATGAGGGCTACTTTCCAACCAAATAAAGTCAAT...GCTTCTGACGTGTCCAGGACAGAGCATCCCTGGATTCTGTTCAGGGTGGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000482227.5
CDS-3UTR CAA 90 bp AAAATAAAGAACACCTGTACAGACCTGGTTTGGGGGAGAACTGCCAAGGAACTGGACTCACCGGAGAACTaGTTAGAAATGCAAATTATC +
Preference number: 5 (lower is better)
Translates to: KIKNTCTDLVWGRTAKELDSPEN*LEMQII
Trigger: GATAATTTGCATTTCTAACAAGTTCTCCGGTGAGTC...CAGTTCCTTGGCAGTTCTCCCCCAAACCAGGTCTGTACAGGTGTTCTTTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS CCA 72 bp GGGCGTGCCCACCCACAGCCCAGAGAGGCTGGATTCTaGGCGCCCCAGCCACTTGCCACACCTCCCACTGCT +
Preference number: 6 (lower is better)
Translates to: GRAHPQPREAGF*APQPLATPPTA
Trigger: AGCAGTGGGAGGTGTGGCAAGTGGCTGGGGCGCCCAGAATCCAGCCTCTCTGGGCTGTGGGTGGGCACGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484874.2
CDS GCA 72 bp TGCCAGGTAGTGGAGGAGCATCACTCAGCCTGGGCGTaGCCACCCACAGCCCAGAGAGGCTGGATTCTGGGC +
Preference number: 6 (lower is better)
Translates to: CQVVEEHHSAWA*PPTAQRGWILG
Trigger: GCCCAGAATCCAGCCTCTCTGGGCTGTGGGTGGGCACGCCCAGGCTGAGTGATGCTCCTCCACTACCTGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484874.2
CDS CCA 72 bp CGCACAGCCAGAGCCTCGAGGCTTTGGGGGCAGAGCTaGAGCAGGTTCTTGCCAGGCAGCTGCCAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: RTARASRLWGQS*SRFLPGSCQSS
Trigger: TGAGGACTGGCAGCTGCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTGGCTGTGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000465415.1
ENST00000480348.6
ENST00000481077.6
ENST00000482227.5
ENST00000525687.5
ENST00000531191.5
CDS GCA 72 bp AGATCCCAGCCACGTGGCTGCAGATCCTCAGGACTGTaGCCTCCTTCTCAGCCGCTGGACCATCCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: RSQPRGCRSSGL*PPSQPLDHPSG
Trigger: GCCACTGGGATGGTCCAGCGGCTGAGAAGGAGGGCACAGTCCTGAGGATCTGCAGCCACGTGGCTGGGATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528001.1
ENST00000531150.5
CDS CAA 90 bp GGGAGGCAGAGTCTGTCCAGGCAGGGCTGGGTCCGGGACTGGGGTTaGAAGACAGGTCAAAGGCAAAGACGTCTTCAGATGGGGCCCTGT +
Preference number: 6 (lower is better)
Translates to: GRQSLSRQGWVRDWG*KTGQRQRRLQMGPC
Trigger: ACAGGGCCCCATCTGAAGACGTCTTTGCCTTTGACCTGTCTTCAAACCCCAGTCCCGGACCCAGCCCTGCCTGGACAGACTCTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528281.5
CDS GCA 72 bp GGGGTCCAGGTCTCTACCGGTTCCATGGCCCAGCTCTaGCAGCTCGAATCAGCTCCTGTTTTGCCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GVQVSTGSMAQL*QLESAPVLPCC
Trigger: ACAGCAGGGCAAAACAGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGACCTGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361530.11
ENST00000480348.6
ENST00000481077.6
CDS GCA 72 bp CATCCCACCATGTCCCTCTCCTCACGCACCACCACCTaGTCGTTGATCTGGACAACCTCGTCTCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: HPTMSLSSRTTT*SLIWTTSSPGW
Trigger: CCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGCGTGAGGAGAGGGACATGGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374253.9
CDS CCA 72 bp CCACCTTTCCGGGGGTCCAGGTCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCGAATCAGCTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: PPFRGSRSLPVP*PSSASSNQLLF
Trigger: AAACAGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGACCTGGACCCCCGGAAAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000465415.1
ENST00000480348.6
ENST00000482227.5
ENST00000525687.5
CDS CCA 72 bp TCCCTCTCCTCACGCACCACCACCTGCTCGTTGATCTaGACAACCTCGTCTCCAGGCTGGATCTGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: SLSSRTTTCSLI*TTSSPGWICSR
Trigger: CCGACTGCAGATCCAGCCTGGAGACGAGGTTGTCCAGATCAACGAGCAGGTGGTGGTGCGTGAGGAGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374253.9
CDS CCA 72 bp GGTCTCACTGTAGCAGTCTGGGGTGAGGAGCAGCAGTaGGTTTTTGGGAGGCCAGGGAGTGGCCTAGGGCAT +
Preference number: 6 (lower is better)
Translates to: GLTVAVWGEEQQ*VFGRPGSGLGH
Trigger: ATGCCCTAGGCCACTCCCTGGCCTCCCAAAAACCCACTGCTGCTCCTCACCCCAGACTGCTACAGTGAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484874.2
CDS GCA 72 bp TCATGGGTTGCCCCCAGAAGTCCCTCTGTCAGGCTTTaGAGGTTCTCTGTCTGTAGCCTGGAGCTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SWVAPRSPSVRL*RFSVCSLELRA
Trigger: GGCCCTGAGCTCCAGGCTACAGACAGAGAACCTGCAAAGCCTGACAGAGGGACTTCTGGGGGCAACCCATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361530.11
ENST00000374253.9
ENST00000465415.1
ENST00000480348.6
ENST00000481077.6
ENST00000482227.5
ENST00000525687.5
ENST00000531191.5
CDS CCA 72 bp TCCCAGCCACGTGGCTGCAGATCCTCATGCAAGACCTaGCTCAGCTCCTCCAACAAGTCTCGGATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SQPRGCRSSCKT*LSSSNKSRISW
Trigger: CCAGGAGATCCGAGACTTGTTGGAGGAGCTGAGCCAGGTCTTGCATGAGGATCTGCAGCCACGTGGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480348.6
CDS CCA 72 bp AGACCTTTCCGGGGGTCCAGGTCTCTACCGGTTCCATaGCCCAGCTCTGCCAGCTCGAATCAGCTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: RPFRGSRSLPVP*PSSASSNQLLF
Trigger: AAACAGGAGCTGATTCGAGCTGGCAGAGCTGGGCCATGGAACCGGTAGAGACCTGGACCCCCGGAAAGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481077.6
CDS CCA 72 bp CTCAAAGGGATAGTCCTGCAGGGAGTCGTCAAGACCTaGAGGGAGAGTAAGGCTCAGCTCGGGGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: LKGIVLQGVVKT*RESKAQLGEAE
Trigger: CTCTGCTTCCCCGAGCTGAGCCTTACTCTCCCTCCAGGTCTTGACGACTCCCTGCAGGACTATCCCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS GCA 72 bp ATTGCTGGTGGTGTGAATTTCAATGGACTGTCCAGCTaGACCTGCTCGAGCACGGCCTTCTGTTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: IAGGVNFNGLSS*TCSSTAFCSSS
Trigger: GCTGCTGGAACAGAAGGCCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGAAATTCACACCACCAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528001.1
CDS CAA 72 bp GCCCCCAGACCAGCAGCAGCAGACTCACCGGAGAACTaGTTAGAAATGCAAATTATCAGGCCTCACCCCACA +
Preference number: 6 (lower is better)
Translates to: APRPAAADSPEN*LEMQIIRPHPT
Trigger: TGTGGGGTGAGGCCTGATAATTTGCATTTCTAACAAGTTCTCCGGTGAGTCTGCTGCTGCTGGTCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS CAA 72 bp AGGCTCAGCTCGGGGAAGCAGAGGTGTCAGGACCTTTaGGGATGGTTCTTCATGCCTGCAAAGCTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: RLSSGKQRCQDL*GWFFMPAKLFS
Trigger: GGAAAAGAGCTTTGCAGGCATGAAGAACCATCCCAAAAGGTCCTGACACCTCTGCTTCCCCGAGCTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531191.5
CDS GCA 72 bp CCTGGGTGTCCACTTGGGACACAAAGTGCTGGCAATTaGTGGTGGTGTGAATTTCAATGGACTGTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: PGCPLGTQSAGN*WWCEFQWTVQL
Trigger: CAGCTGGACAGTCCATTGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528001.1
CDS CCA 72 bp GGGTGTCCACTTGGGACACAAAGTGCTGGCAATTGCTaGTGGTGTGAATTTCAATGGACTGTCCAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: GCPLGTQSAGNC*WCEFQWTVQLH
Trigger: GTGCAGCTGGACAGTCCATTGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528001.1
CDS TCA 72 bp AACAAGAGCCAAGATCTGTTTTTCTCTCCCACGCCCTaGAGGAGGCCAAGGATGACAATAGTCCCTCACTCG +
Preference number: 6 (lower is better)
Translates to: NKSQDLFFSPTP*RRPRMTIVPHS
Trigger: CGAGTGAGGGACTATTGTCATCCTTGGCCTCCTTCAGGGCGTGGGAGAGAAAAACAGATCTTGGCTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465415.1
CDS TCA 72 bp GCGAAGATGAAGGGTTTGTACACATCATGGGTGAGCTaGAACACACTGCCAGGTAGTGGAGGAGCATCACTC +
Preference number: 6 (lower is better)
Translates to: AKMKGLYTSWVS*NTLPGSGGASL
Trigger: GAGTGATGCTCCTCCACTACCTGGCAGTGTGTTTCAGCTCACCCATGATGTGTACAAACCCTTCATCTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484874.2
CDS CCA 72 bp TGTCCACTTGGGACACAAAGTGCTGGCAATTGCTGGTaGTGTGAATTTCAATGGACTGTCCAGCTGCACCTG +
Preference number: 6 (lower is better)
Translates to: CPLGTQSAGNCW*CEFQWTVQLHL
Trigger: CAGGTGCAGCTGGACAGTCCATTGAAATTCACACCACCAGCAATTGCCAGCACTTTGTGTCCCAAGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528001.1
CDS GCA 72 bp TGGCAGGGGAAGAATAGCACAGTGGTTAAGGGACTATaGTTAACCACTCAGAGCCAATTACTCACCAATTAC +
Preference number: 6 (lower is better)
Translates to: WQGKNSTVVKGL*LTTQSQLLTNY
Trigger: GTAATTGGTGAGTAATTGGCTCTGAGTGGTTAAGCATAGTCCCTTAACCACTGTGCTATTCTTCCCCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524529.6
CDS GCA 72 bp ACCAATTACTCACCTCAGAGACTTGGGGATAATACCTaGTCTGATGGGTTTTGGTTTAGAGTAAAGGAGATG +
Preference number: 6 (lower is better)
Translates to: TNYSPQRLGDNT*SDGFWFRVKEM
Trigger: CATCTCCTTTACTCTAAACCAAAACCCATCAGAGCAGGTATTATCCCCAAGTCTCTGAGGTGAGTAATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524529.6