RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNIH4 (Homo sapiens)

Ensembl gene IDs: ENSG00000143771

Ensembl transcript IDs: ENST00000366856.3, ENST00000366857.9, ENST00000366858.7, ENST00000366860.9, ENST00000465271.6, ENST00000468318.5, ENST00000469200.1, ENST00000477413.1

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTaGCTTAGTGGCTCCCTTGCTTCTGCCAAGGCTAGACCTGGTCAA +
Preference number: 1 (lower is better)
Translates to: ALLPALKHGLSAQGV*LSGSLASAKARPGQ
Trigger: TTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 90 bp TTTCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTaGAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCTCCC +
Preference number: 1 (lower is better)
Translates to: FHRSFCVLPGHYFQP*NMVCLHREFGLVAP
Trigger: GGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 90 bp CATGAAATGGCTTGCATTTGGTCTCCCAGTTCACAACGTGGTCAGTaGAGAGGGATAGAAGTGTTGATCTGGCACCACGTGGCGCACCAA +
Preference number: 1 (lower is better)
Translates to: HEMACIWSPSSQRGQ*RGIEVLIWHHVAHQ
Trigger: TTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CCA 90 bp CCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATCTaGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGACAGCAA +
Preference number: 1 (lower is better)
Translates to: PSSQRGQCRGIEVLI*HHVAHQKAQFHRQQ
Trigger: TTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 90 bp GCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTTTaGCTACCATTTCACCGTTCCTTTTGTGTGTTGCCAGGGCACTAC +
Preference number: 1 (lower is better)
Translates to: AISVTPKRPAEPSSL*LPFHRSFCVLPGHY
Trigger: GTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 90 bp AGCCAAGTTCACTTTGCCTACCATTTCACCGTTCCTTTTGTGTGTTaGCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGTCTGCACA +
Preference number: 1 (lower is better)
Translates to: SQVHFAYHFTVPFVC*QGTTSSLETWSVCT
Trigger: TGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 90 bp GCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCTACCACTGAAAGGATAGAAGGAAAA +
Preference number: 1 (lower is better)
Translates to: ASWISLPLLSQPRLR*LARAVATTERIEGK
Trigger: TTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CCA 90 bp CAGAGTTTGGTTGTATATTGCTATGTCCATGAAATGGCTTGCATTTaGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTG +
Preference number: 1 (lower is better)
Translates to: QSLVVYCYVHEMACI*SPSSQRGQCRGIEV
Trigger: CACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CCA 90 bp ACTCCAAGGAACAGAGTTTGGTTGTATATTGCTATGTCCATGAAATaGCTTGCATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: TPRNRVWLYIAMSMK*LAFGLPVHNVVSAE
Trigger: CTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 90 bp GGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAAATATaGATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGTG +
Preference number: 1 (lower is better)
Translates to: GTVLGAKSRRKKIQI*MGIFCPPGTYNLRV
Trigger: CACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR TCA 90 bp AGGTTTATTTTACCCTGTAAGAGCTGGCAAACAGAGCTAAGGAGGTaGACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGG +
Preference number: 1 (lower is better)
Translates to: RFILPCKSWQTELRR*TALPPARVYNITPR
Trigger: CCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 90 bp TGCAAGCAAAGTAATGTCTGTTACACAGCTTCTTGGCCCTGTGCCTaGCAGAAATATAAGATTACCACAAGGAGCAATTTCTGTGACCCC +
Preference number: 1 (lower is better)
Translates to: CKQSNVCYTASWPCA*QKYKITTRSNFCDP
Trigger: GGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 90 bp GTAAGGAGCTTTGACCTCTGTTATAAACATGGCACCTTTCTGATTTaGTTAGCCTCAGCAAGCCTGATGTACTGTAAACTGACAGCCCAA +
Preference number: 1 (lower is better)
Translates to: VRSFDLCYKHGTFLI*LASASLMYCKLTAQ
Trigger: TTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 90 bp GTACCACACACCCTGTTTAGCCACCCAATTCTATCTCAACTAGAGTaGATAATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTG +
Preference number: 1 (lower is better)
Translates to: VPHTLFSHPILSQLE*IMPLDSPTEHSHVL
Trigger: CAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 90 bp AAGAGTTTACAATATAACTCCAAGGAACAGAGTTTGGTTGTATATTaGTATGTCCATGAAATGGCTTGCATTTGGTCTCCCAGTTCACAA +
Preference number: 1 (lower is better)
Translates to: KSLQYNSKEQSLVVY*YVHEMACIWSPSSQ
Trigger: TTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 90 bp TGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTaGATCTGGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGA +
Preference number: 2 (lower is better)
Translates to: WSPSSQRGQCRGIEV*IWHHVAHQKAQFHR
Trigger: TCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTaGCTTAGTGGCTCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: PFLLCVARALLPALKHGLSAQGV*LSGSLA
Trigger: AGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGA...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 90 bp ATTTCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTaGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: ISPFLLCVARALLPA*KHGLSAQGVWLSGS
Trigger: GGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 90 bp GCCAGCAGAGCCAAGTTCACTTTGCCTACCATTTCACCGTTCCTTTaGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTG +
Preference number: 2 (lower is better)
Translates to: ASRAKFTLPTISPFL*CVARALLPALKHGL
Trigger: CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCACTGTAGTGTAGGCTaGCTTCAACCACGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: SPFLLCVARALLPALKHGHCSVG*LQPRLL
Trigger: GAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTG...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp AGTGTTGATCTGGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGACAGCACCTGAAGGGCACCTTTaGTCGCTCATCTCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: SVDLAPRGAPKGSISQTAPEGHL*SLISSV
Trigger: AACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGG...TGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTGCTAAGGAGGTGAACTaGTCTCCCACCTGCAAGAGT +
Preference number: 2 (lower is better)
Translates to: SPFLLCVARALLPALKHGAKEVN*SPTCKS
Trigger: ACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGC...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTTCCAGCCTTGAAACATaGTCTGTCTGCACAGGGAGT +
Preference number: 2 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTSSLET*SVCTGS
Trigger: ACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGA...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 90 bp AGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTTaGCCTACCATTTCACCGTTCCTTTTGTGTGTTGCCAGGGCACTA +
Preference number: 2 (lower is better)
Translates to: SNFCDPKEASRAKFT*PTISPFLLCVARAL
Trigger: TAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGCACTACTTCCAGCCTTaGAACATGGTCTGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRHYFQP*NMVCLH
Trigger: GTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTG...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTAGGCACTGTGTTAGGTaGCAAGAGCAGAAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTRHCVR*QEQKEE
Trigger: TTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCT...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTTCCCAGTTCACAACGTaGTCAGTGCAGAGGGATAGA +
Preference number: 2 (lower is better)
Translates to: SPFLLCVARALLPALKHGSQFTT*SVQRDR
Trigger: TCTATCCCTCTGCACTGACCACGTTGTGAACTGGGA...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTTTACCCTGTAAGAGCTaGCAAACAGAGCTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTLPCKS*QTELRR
Trigger: CCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAA...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCCCACGATTGCGCCAGTaGACTCCAGCTTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIPRLRQ*TPAWAT
Trigger: TGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGG...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAATAGAAGTGTTGATCTaGCACCACGTGGCGCACCAA +
Preference number: 2 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQIEVLI*HHVAHQ
Trigger: TTGGTGCGCCACGTGGTGCCAGATCAACACTTCTAT...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGGAAATGGCTTGCATTTaGTCTCCCAGTTCACAACGT +
Preference number: 2 (lower is better)
Translates to: PFLLCVARALLPALKHGLEMACI*SPSSQR
Trigger: ACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTC...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTGAAATGGCTTGCATTTaGTCTCCCAGTTCACAACGT +
Preference number: 2 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTEMACI*SPSSQR
Trigger: ACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTC...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp TTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCCACTGTAGTGTAGGCTaGCTTCAACCACGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: LALNFKDQVRFCPTVVCGHCSVG*LQPRLL
Trigger: GAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTG...GCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCTTCTACCCAAACCCATaGAAATACGTTATCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGFYPNP*KYVIRE
Trigger: CTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAA...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGTCTTGGCCCTGTGCCTaGCAGAAATATAAGATTACC +
Preference number: 2 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRSWPCA*QKYKIT
Trigger: GGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGA...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTTTTGATGAACTGAGCTaGATCTTGGATTTCGCTTCC +
Preference number: 2 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTFDELS*ILDFAS
Trigger: GGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAA...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGTTTATTTCTTTGGCATaGAAAGCTGGGATGGCAGTC +
Preference number: 2 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRFISLA*KAGMAV
Trigger: GACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAA...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAATCCCAGTTCACAACGTaGTCAGTGCAGAGGGATAGA +
Preference number: 2 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKESQFTT*SVQRDR
Trigger: TCTATCCCTCTGCACTGACCACGTTGTGAACTGGGA...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCCTCGATAGTAGTCTATaGACCGGGCCCTGGGTACTG +
Preference number: 2 (lower is better)
Translates to: GRRYKYEWAYSALQEHTILDSSL*TGPWVL
Trigger: CAGTACCCAGGGCCCGGTCCATAGACTACTATCGAG...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGTCAACATACAGAGGATaGAAAACACCTTCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: PFLLCVARALLPALKHGLSTYRG*KTPSSV
Trigger: AACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGA...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGTTCCTGCTTCTAATCTaGTTAGCATCTTCTACCCAA +
Preference number: 2 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRFLLLI*LASSTQ
Trigger: TTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAA...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCCTATCTCAACTAGAGTaGATAATGCCTTTGGATTCT +
Preference number: 2 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGLSQLE*IMPLDS
Trigger: AGAATCCAAAGGCATTATTCACTCTAGTTGAGATAG...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCTTTATTTCTTTGGCATaGAAAGCTGGGATGGCAGTC +
Preference number: 2 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCFISLA*KAGMAV
Trigger: GACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAA...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCGCTAAGGAGGTGAACTaGTCTCCCACCTGCAAGAGT +
Preference number: 2 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSAKEVN*SPTCKS
Trigger: ACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGC...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCTCTGCACAGGGAGTTTaGCTTAGTGGCTCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSSAQGV*LSGSLA
Trigger: AGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGA...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCGATGCCATTCTCTGTTaGCATTCTTGTGAAAAGACT +
Preference number: 2 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCDAILC*HSCEKT
Trigger: AGTCTTTTCACAAGAATGTCAACAGAGAATGGCATC...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATTTCCTGCTTCTAATCTaGTTAGCATCTTCTACCCAA +
Preference number: 2 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDFLLLI*LASSTQ
Trigger: TTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAA...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR TCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCGGAGGAAAGGCAGAGTaGAGGGACTGTTTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSGGKAE*RDCFLS
Trigger: GCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCC...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGCTCATCTCTTCAGTTTaGCCTTTAAAGTGTGTTCTT +
Preference number: 2 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRLISSV*PLKCVL
Trigger: AAGAACACACTTTAAAGGGCAAACTGAAGAGATGAG...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAGAACTACATTGTACCTaGGGAAAATGGCTTATAAGG +
Preference number: 2 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQELHCT*GKWLIR
Trigger: CCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTC...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCCCAAGGAACAGAGTTTaGTTGTATATTGCTATGTCC +
Preference number: 2 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCPRNRV*LYIAMS
Trigger: GGACATAGCAATATACAACCAAACTCTGTTCCTTGG...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATATAGAATGTGGTAAGTaGCATGGGAGATACTACTAT +
Preference number: 2 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDIECGK*HGRYYY
Trigger: ATAGTAGTATCTCCCATGGCACTTACCACATTCTAT...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCAGGCACTGTGTTAGGTaGCAAGAGCAGAAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIRHCVR*QEQKEE
Trigger: TTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCT...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR-3UTR GCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGTACAATTGGAATAACTaGAATACGAAAACCAGACTG +
Preference number: 2 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRYNWNN*NTKTRL
Trigger: CAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTA...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTAGTTTGGTTGTATATTaGTATGTCCATGAAATGGCT +
Preference number: 2 (lower is better)
Translates to: SPFLLCVARALLPALKHGSLVVY*YVHEMA
Trigger: AGCCATTTCATGGACATAGCAATATACAACCAAACT...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCATACGAAAACCAGACTaGCAAGAGCCAGTGGGGATT +
Preference number: 2 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSIRKPD*QEPVGI
Trigger: AATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTAT...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 90 bp CCACCTGCAAGAGTTTACAATATAACTCCAAGGAACAGAGTTTGGTaGTATATTGCTATGTCCATGAAATGGCTTGCATTTGGTCTCCCA +
Preference number: 2 (lower is better)
Translates to: PPARVYNITPRNRVW*YIAMSMKWLAFGLP
Trigger: TGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTTTTGATGAACTGAGCTaGATCTTGGATTTCGCTTCC +
Preference number: 2 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCFDELS*ILDFAS
Trigger: GGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAA...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR-3UTR GCA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAAGAGGAAAATATATACTaGTATGGTCACGGTTCTAAG +
Preference number: 2 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKEEENIY*YGHGSK
Trigger: CTTAGAACCGTGACCATAGCAGTATATATTTTCCTC...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 90 bp TCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAACAGAGTTaGGTTGTATATTGCTATGTCCATGAAATGGCTTGCATTTGGTCT +
Preference number: 2 (lower is better)
Translates to: SPTCKSLQYNSKEQS*VVYCYVHEMACIWS
Trigger: AGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATTTGATGAACTGAGCTaGATCTTGGATTTCGCTTCC +
Preference number: 2 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQFDELS*ILDFAS
Trigger: GGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAA...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR-3UTR GCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGTTTGATGAACTGAGCTaGATCTTGGATTTCGCTTCC +
Preference number: 2 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKFDELS*ILDFAS
Trigger: GGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAA...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR-3UTR TCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCCTATCTCAACTAGAGTaGATAATGCCTTTGGATTCT +
Preference number: 2 (lower is better)
Translates to: GRRYKYEWAYSALQEHTILSQLE*IMPLDS
Trigger: AGAATCCAAAGGCATTATTCACTCTAGTTGAGATAG...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCAGCTTATCTCTCAGTTaGAAGGATTTAAGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: GRRYKYEWAYSALQEHTISLSLS*KDLSSP
Trigger: TGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCT...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR GCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAAGAGGAAAATATATACTaGTATGGTCACGGTTCTAAG +
Preference number: 2 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQEENIY*YGHGSK
Trigger: CTTAGAACCGTGACCATAGCAGTATATATTTTCCTC...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 72 bp CACTCGATAGTAGTCTATGGACCGGGCCCTGGGTACTaGCATTATAGAGGGAAGGGGAAGAGGAGTGGTAAG +
Preference number: 3 (lower is better)
Translates to: HSIVVYGPGPGY*HYRGKGKRSGK
Trigger: CTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 72 bp GCTTGCATTTGGTCTCCCAGTTCACAACGTGGTCAGTaGAGAGGGATAGAAGTGTTGATCTGGCACCACGTG +
Preference number: 3 (lower is better)
Translates to: ACIWSPSSQRGQ*RGIEVLIWHHV
Trigger: CACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CCA 72 bp CAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATCTaGCACCACGTGGCGCACCAAAAGGCTCAATTTCAC +
Preference number: 3 (lower is better)
Translates to: QRGQCRGIEVLI*HHVAHQKAQFH
Trigger: GTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAGGCTTAGTGGCTCCCTaGCTTCTGCCAAGGCTAGAC +
Preference number: 3 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQGLVAP*LLPRLD
Trigger: GTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCC...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 72 bp GTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTTTaGCTACCATTTCACCGTTCCTTTTGTGTGTTGCCA +
Preference number: 3 (lower is better)
Translates to: VTPKRPAEPSSL*LPFHRSFCVLP
Trigger: TGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp AGTGTTGATCTGGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGACAGCAGAACTGAGCTGCATCTaGGATTTCGCTTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: SVDLAPRGAPKGSISQTAELSCI*DFASSS
Trigger: AGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTC...TGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 72 bp TCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTaGAACATGGTCTGTCTGCACAGGGAGTTTGGCTTA +
Preference number: 3 (lower is better)
Translates to: SFCVLPGHYFQP*NMVCLHREFGL
Trigger: TAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTTCAGCAGGAACTACATaGTACCTGGGGAAAATGGCT +
Preference number: 3 (lower is better)
Translates to: SPFLLCVARALLPALKHGSAGTT*YLGKMA
Trigger: AGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGA...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 72 bp CACTTTGCCTACCATTTCACCGTTCCTTTTGTGTGTTaGCAGGGCACTACTTCCAGCCTTGAAACATGGTCT +
Preference number: 3 (lower is better)
Translates to: HFAYHFTVPFVC*QGTTSSLETWS
Trigger: AGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAGAACTGAGCTGCATCTaGGATTTCGCTTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQELSCI*DFASSS
Trigger: AGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTC...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTGCTCATCTCTTCAGTTaGCCCTTTAAAGTGTGTTCT +
Preference number: 3 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTAHLFS*PFKVCS
Trigger: AGAACACACTTTAAAGGGCAAACTGAAGAGATGAGC...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp GTTTGTGTGCAAGGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAAGAACTGAGCTGCATCTaGGATTTCGCTTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: VCVQGTVLGAKSRRKKIQELSCI*DFASSS
Trigger: AGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTC...TTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR-3UTR CAA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTGTGTTCTTTATTTCTTaGGCATGCAAAGCTGGGATG +
Preference number: 3 (lower is better)
Translates to: SPFLLCVARALLPALKHGVFFIS*ACKAGM
Trigger: CATCCCAGCTTTGCATGCCAAAGAAATAAAGAACAC...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCAGAGGGATAGAAGTGTaGATCTGGCACCACGTGGCG +
Preference number: 3 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIRGIEV*IWHHVA
Trigger: CGCCACGTGGTGCCAGATCAACACTTCTATCCCTCT...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 72 bp ATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCTACCACTGAAAGGATA +
Preference number: 3 (lower is better)
Translates to: ISLPLLSQPRLR*LARAVATTERI
Trigger: TATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CCA 72 bp GTTGTATATTGCTATGTCCATGAAATGGCTTGCATTTaGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: VVYCYVHEMACI*SPSSQRGQCRG
Trigger: CCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCGCGTTCAGGCTAAAGTaGAGAACTAGAAATCTACAG +
Preference number: 3 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCAFRLK*RTRNLQ
Trigger: CTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGC...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 72 bp TTACCCTGTAAGAGCTGGCAAACAGAGCTAAGGAGGTaGACTGCTCTCCCACCTGCAAGAGTTTACAATATA +
Preference number: 3 (lower is better)
Translates to: LPCKSWQTELRR*TALPPARVYNI
Trigger: TATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAGGACTGAGGATAAATaGCCAGGTTTATTTTACCCT +
Preference number: 3 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQRTEDK*PGLFYP
Trigger: AGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCT...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGACCAGGTCAGGTTTaGTCCTACTGTAGTCTGTGG +
Preference number: 3 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKRPGQV*SYCSLW
Trigger: CCACAGACTACAGTAGGACAAAACCTGACCTGGTCT...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR-3UTR CAA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCATTTCACCGTTCCTTTaGTGTGTTGCCAGGGCACTA +
Preference number: 3 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIISPFL*CVARAL
Trigger: TAGTGCCCTGGCAACACACAAAAGGAACGGTGAAAT...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR TCA 72 bp ACCCTGTTTAGCCACCCAATTCTATCTCAACTAGAGTaGATAATGCCTTTGGATTCTCCCACAGAACACAGT +
Preference number: 3 (lower is better)
Translates to: TLFSHPILSQLE*IMPLDSPTEHS
Trigger: ACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR-3UTR CAA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAAGAACTGAGCTGCATCTaGGATTTCGCTTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQELSCI*DFASSS
Trigger: AGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTC...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR-3UTR CAA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCAAACACCTTCAAGTGTaGGCGTTCAGGCTAAAGTTG +
Preference number: 3 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIKHLQV*AFRLKL
Trigger: CAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTT...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 72 bp TTTGACCTCTGTTATAAACATGGCACCTTTCTGATTTaGTTAGCCTCAGCAAGCCTGATGTACTGTAAACTG +
Preference number: 3 (lower is better)
Translates to: FDLCYKHGTFLI*LASASLMYCKL
Trigger: CAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR GCA 72 bp CAATATAACTCCAAGGAACAGAGTTTGGTTGTATATTaGTATGTCCATGAAATGGCTTGCATTTGGTCTCCC +
Preference number: 3 (lower is better)
Translates to: QYNSKEQSLVVY*YVHEMACIWSP
Trigger: GGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CCA 72 bp ATATTTCCTTTCTATCAGCAGGAACTACATTGTACCTaGGGAAAATGGCTTATAAGGTTTCACAAATTGTGC +
Preference number: 3 (lower is better)
Translates to: IFPFYQQELHCT*GKWLIRFHKLC
Trigger: GCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CCA 72 bp TTCTATCAGCAGGAACTACATTGTACCTGGGGAAAATaGCTTATAAGGTTTCACAAATTGTGCAAAGAAATA +
Preference number: 3 (lower is better)
Translates to: FYQQELHCTWGK*LIRFHKLCKEI
Trigger: TATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGCCACGATTGCGCCAGTaGACTCCAGCTTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVPRLRQ*TPAWAT
Trigger: TGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGG...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGCCGGGCCCTGGGTACTaGCATTATAGAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PFLLCVARALLPALKHGLPGPGY*HYRGKG
Trigger: CCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGG...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCCGGGCCCTGGGTACTaGCATTATAGAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPFLLCVARALLPALKHGPGPGY*HYRGKG
Trigger: CCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGG...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGAGACCGAGAGGAAGATaGGCGCGCAACAATCGAGGA +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVRPRGR*ARNNRG
Trigger: TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCT...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR TCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTAGACCGAGAGGAAGATaGGCGCGCAACAATCGAGGA +
Preference number: 4 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTRPRGR*ARNNRG
Trigger: TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCT...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCCTCGATAGTAGTCTATaGACCGGGCCCTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGLDSSL*TGPWVL
Trigger: CAGTACCCAGGGCCCGGTCCATAGACTACTATCGAG...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 72 bp AGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTaGATCTGGCACCACGTGGCGCACCAAAAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: SSQRGQCRGIEV*IWHHVAHQKAQ
Trigger: TTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGTCTGCACAGGGAGTTTaGCTTAGTGGCTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVSAQGV*LSGSLA
Trigger: AGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGA...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAACAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQQPRLR*LARAVA
Trigger: AGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTG...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDQPRLR*LARAVA
Trigger: AGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTG...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGCCTGAAGGGCACCTTTaGTCGCTCATCTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVPEGHL*SLISSV
Trigger: AACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGG...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGGCTAAGGAGGTGAACTaGTCTCCCACCTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRAKEVN*SPTCKS
Trigger: ACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGC...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGGTTCCTTTTGTGTGTTaGCAGGGCACTACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVVPFVC*QGTTSS
Trigger: GCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAAC...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGTTTGGCATGCAAAGCTaGGATGGCAGTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVFGMQS*DGSPVP
Trigger: AGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAA...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCTTTGGCATGCAAAGCTaGGATGGCAGTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGFGMQS*DGSPVP
Trigger: AGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAA...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTAGTAATCCCAACATCTaGGAGGCCGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SPFLLCVARALLPALKHGSNPNI*EAEAGE
Trigger: TTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACT...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 72 bp GGGGACCTGCTAGGCTTTGATGAACTGAGCTGCATCTaGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: GDLLGFDELSCI*DFASSSFSAEV
Trigger: AACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
3UTR CAA 72 bp TGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTTaGCCTACCATTTCACCGTTCCTTTTGTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: CDPKEASRAKFT*PTISPFLLCVA
Trigger: GGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GTTTGTGTGCAAGGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAAAGACCGAGAGGAAGATaGGCGCGCAACAATCGAGGA +
Preference number: 4 (lower is better)
Translates to: VCVQGTVLGAKSRRKKIQRPRGR*ARNNRG
Trigger: TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCT...TTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGAGGCACTGTGTTAGGTaGCAAGAGCAGAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVRHCVR*QEQKEE
Trigger: TTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCT...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATGCTAAGGAGGTGAACTaGTCTCCCACCTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDAKEVN*SPTCKS
Trigger: ACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGC...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGGAGCCAAGTTCACTTTaGCTACCATTTCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: PFLLCVARALLPALKHGLEPSSL*LPFHRS
Trigger: GGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTC...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGCCAGAAAGCAGAGGTTaGAGTGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRPESRG*SELRSH
Trigger: GTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGG...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGATACGAAAACCAGACTaGCAAGAGCCAGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: PFLLCVARALLPALKHGLIRKPD*QEPVGI
Trigger: AATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTAT...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAATCTGCACAGGGAGTTTaGCTTAGTGGCTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQSAQGV*LSGSLA
Trigger: AGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGA...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAGTAATCCCAACATCTaGGAGGCCGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQSNPNI*EAEAGE
Trigger: TTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACT...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 72 bp TTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTaGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLLCVARALLPA*KHGLSAQGVWL
Trigger: AAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GTTTGTGTGCAAGGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAACACTGTAGTGTAGGCTaGCTTCAACCACGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VCVQGTVLGAKSRRKKIQHCSVG*LQPRLL
Trigger: GAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTG...TTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCGGAGGAAAGGCAGAGTaGAGGGACTGTTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCGGKAE*RDCFLS
Trigger: GCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCC...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AGTGTTGATCTGGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGACAGCAGTCCATGAAATGGCTTaGATTTGGTCTCCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SVDLAPRGAPKGSISQTAVHEMA*IWSPSS
Trigger: TGAACTGGGAGACCAAATGCAAGCCATTTCATGGAC...TGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCGTCCATGAAATGGCTTaGATTTGGTCTCCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGVHEMA*IWSPSS
Trigger: TGAACTGGGAGACCAAATGCAAGCCATTTCATGGAC...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATCCAGAAAGCAGAGGTTaGAGTGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDPESRG*SELRSH
Trigger: GTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGG...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCGAAATGGCTTGCATTTaGTCTCCCAGTTCACAACGT +
Preference number: 4 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGEMACI*SPSSQR
Trigger: ACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTC...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp TTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCATTCGCTGGGCATGGTaGTGTGCACCTACTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LALNFKDQVRFCPTVVCGIRWAW*CAPTPN
Trigger: GTTGGGAGTAGGTGCACACCACCATGCCCAGCGAAT...GCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
3UTR CAA 72 bp GCCAAGTTCACTTTGCCTACCATTTCACCGTTCCTTTaGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: AKFTLPTISPFL*CVARALLPALK
Trigger: TTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTGCTCTCTCAACTGCATaGGTCACTGTTTTGGTTACT +
Preference number: 4 (lower is better)
Translates to: SPFLLCVARALLPALKHGALSTA*VTVLVT
Trigger: AGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGC...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAGGCACTGTGTTAGGTaGCAAGAGCAGAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQRHCVR*QEQKEE
Trigger: TTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCT...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTTTTATTTCTTTGGCATaGAAAGCTGGGATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTFISLA*KAGMAV
Trigger: GACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAA...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCTCACAACGTGGTCAGTaGAGAGGGATAGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCSQRGQ*RGIEVL
Trigger: CAACACTTCTATCCCTCTGCACTGACCACGTTGTGA...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCCTCCAACAGCTTCGTTaGTTTAAAAAGCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGLQQLR*FKKLEQ
Trigger: CTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAG...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTAAAGGCTCTCTCAACTaGATGAGTCACTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTKGSLN*MSHCFG
Trigger: ACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTT...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GTTTGTGTGCAAGGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAAGGCACCTTTCTGATTTaGTTAGCCTCAGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VCVQGTVLGAKSRRKKIQGTFLI*LASASL
Trigger: CAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCC...TTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAACCACGATTGCGCCAGTaGACTCCAGCTTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GIFCPPGTYNLRVINCIQPRLRQ*TPAWAT
Trigger: TGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGG...TTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGTCAAACCCGCTCGGATaGCCCGACCCACCCCTGATA +
Preference number: 4 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKSNPLG*PDPPLI
Trigger: TATCAGGGGTGGGTCGGGGCATCCGAGCGGGTTTGA...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366858.7
CDS-3UTR CCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCATACGAAAACCAGACTaGCAAGAGCCAGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCIRKPD*QEPVGI
Trigger: AATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTAT...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATTTACCCTGTAAGAGCTaGCAAACAGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDLPCKS*QTELRR
Trigger: CCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAA...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp AAGCTGGGATGGCAGTCCTGTTCCTACATACAAATAACCACCTTCAACATACAGCAAAAGTCATCTACATaGCCAGGCGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KLGWQSCSYIQITTFNIQQKSST*PGAVAH
Trigger: GTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTG...CTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAACTACTCCCAACTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKELLPTT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAG...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTAGACCGAGAGGAAGATaGGCGCGCAACAATCGAGGA +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCRPRGR*ARNNRG
Trigger: TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCT...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR TCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIQPRLR*LARAVA
Trigger: AGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTG...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR TCA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGTTCCTGCTTCTAATCTaGTTAGCATCTTCTACCCAA +
Preference number: 4 (lower is better)
Translates to: PFLLCVARALLPALKHGLFLLLI*LASSTQ
Trigger: TTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAA...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp TTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCCACTACTTCCAGCCTTaGAACATGGTCTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LALNFKDQVRFCPTVVCGHYFQP*NMVCLH
Trigger: GTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTG...GCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAATCTTGGCCCTGTGCCTaGCAGAAATATAAGATTACC +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQSWPCA*QKYKIT
Trigger: GGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGA...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCTCTTGGCCCTGTGCCTaGCAGAAATATAAGATTACC +
Preference number: 4 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCSWPCA*QKYKIT
Trigger: GGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGA...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGAGGAAGATGAACCAGTaGAATGACATGAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVRKMNQ*NDMSSN
Trigger: ATTACTGCTCATGTCATTGCACTGGTTCATCTTCCT...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp AGTGTTGATCTGGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGACAGCAGGACTGAGGATAAATTaGCAGGTTTATTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: SVDLAPRGAPKGSISQTAGLRIN*QVYFTL
Trigger: CAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCC...TGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAAATAGAAGTGTTGATCTaGCACCACGTGGCGCACCAA +
Preference number: 4 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKEIEVLI*HHVAHQ
Trigger: TTGGTGCGCCACGTGGTGCCAGATCAACACTTCTAT...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp TTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCATAGAAGTGTTGATCTaGCACCACGTGGCGCACCAA +
Preference number: 4 (lower is better)
Translates to: LALNFKDQVRFCPTVVCGIEVLI*HHVAHQ
Trigger: TTGGTGCGCCACGTGGTGCCAGATCAACACTTCTAT...GCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTGCCTCAGTTTATCTTTaGGATGAGGGAGTTAGACAA +
Preference number: 4 (lower is better)
Translates to: SPFLLCVARALLPALKHGASVYL*DEGVRQ
Trigger: TTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGC...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCCTCGATAGTAGTCTATaGACCGGGCCCTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSLDSSL*TGPWVL
Trigger: CAGTACCCAGGGCCCGGTCCATAGACTACTATCGAG...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAACAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQQPRLR*LARAVA
Trigger: AGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTG...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR TCA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATTTCTACCCAAACCCATaGAAATACGTTATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDFYPNP*KYVIRE
Trigger: CTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAA...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAATTCTACCCAAACCCATaGAAATACGTTATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQFYPNP*KYVIRE
Trigger: CTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAA...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCAAGGAGCAATTTCTGTaGCCCCAAAGAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSKEQFL*PQRGQQ
Trigger: CTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTT...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCGGCAGGAGAATCGCTTaGACCCAGAAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIGRRIA*TQKAEV
Trigger: AACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCC...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCGGCAGGAGAATCGCTTaGACCCAGAAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSGRRIA*TQKAEV
Trigger: AACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCC...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATTTTATCCCCCTTTCATaGTTTGTAGAAGTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDFIPLS*FVEVPL
Trigger: TAGGGGCACTTCTACAAATCATGAAAGGGGGATAAA...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTCTCATCTCTTCAGTTTaGCCTTTAAAGTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTLISSV*PLKCVL
Trigger: AAGAACACACTTTAAAGGGCAAACTGAAGAGATGAG...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp CTGAGCTGCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTGCTCATCTCTTCAGTTTaGCCTTTAAAGTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSCILDFASSSFSAEVTVLISSV*PLKCVL
Trigger: AAGAACACACTTTAAAGGGCAAACTGAAGAGATGAG...CACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AGTGTTGATCTGGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGACAGCAAGCTTATCTCTCAGTTaGAAGGATTTAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SVDLAPRGAPKGSISQTASLSLS*KDLSSP
Trigger: TGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCT...TGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGTGTTCTTTATTTCTTTaGCATGCAAAGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRCSLFL*HAKLGW
Trigger: CCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACA...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCCTACTCCCAACTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSLLPTT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAG...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp TTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCAGGGAGAGAGAACACTaGACTAAGCCTCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: LALNFKDQVRFCPTVVCGREREH*TKPQHS
Trigger: TGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCT...GCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGCACTGTAGTGTAGGCTaGCTTCAACCACGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKHCSVG*LQPRLL
Trigger: GAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTG...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTTCAACATACAGAGGATaGAAAACACCTTCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SPFLLCVARALLPALKHGSTYRG*KTPSSV
Trigger: AACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGA...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAATTCCTGCTTCTAATCTaGTTAGCATCTTCTACCCAA +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQFLLLI*LASSTQ
Trigger: TTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAA...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCCACTACTTCCAGCCTTaGAACATGGTCTGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSHYFQP*NMVCLH
Trigger: GTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTG...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCGGAGGAAAGGCAGAGTaGAGGGACTGTTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIGGKAE*RDCFLS
Trigger: GCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCC...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GTTTGTGTGCAAGGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAATTTATCCCCCTTTCATaGTTTGTAGAAGTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: VCVQGTVLGAKSRRKKIQFIPLS*FVEVPL
Trigger: TAGGGGCACTTCTACAAATCATGAAAGGGGGATAAA...TTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAGGAAGATGAACCAGTaGAATGACATGAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQRKMNQ*NDMSSN
Trigger: ATTACTGCTCATGTCATTGCACTGGTTCATCTTCCT...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GTTTGTGTGCAAGGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAATTTGATGAACTGAGCTaGATCTTGGATTTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: VCVQGTVLGAKSRRKKIQFDELS*ILDFAS
Trigger: GGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAA...TTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAACTGCTCTCCCACCTaGAAGAGTTTACAATATAAC +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQNCSPT*KSLQYN
Trigger: GTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTT...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCGGACTGAGGATAAATTaGCAGGTTTATTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCGLRIN*QVYFTL
Trigger: CAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCC...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCGGCACCTTTCTGATTTaGTTAGCCTCAGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIGTFLI*LASASL
Trigger: CAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCC...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTTCCCAGTTCACAACGTaGTCAGTGCAGAGGGATAGA +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCSQFTT*SVQRDR
Trigger: TCTATCCCTCTGCACTGACCACGTTGTGAACTGGGA...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAACCAAGGAACAGAGTTTaGTTGTATATTGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQPRNRV*LYIAMS
Trigger: GGACATAGCAATATACAACCAAACTCTGTTCCTTGG...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCTCCAGCCTTGAAACATaGTCTGTCTGCACAGGGAGT +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSSSLET*SVCTGS
Trigger: ACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGA...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAACAAAAGTCATCTACATaGCCAGGCGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQQKSST*PGAVAH
Trigger: GTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTG...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCCAACTCTCCAATCAATaGAAAGGGGAGAACATTTAT +
Preference number: 4 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCQLSNQ*KGENIY
Trigger: ATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTG...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCGAGGAAAATATATACTaGTATGGTCACGGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCEENIY*YGHGSK
Trigger: CTTAGAACCGTGACCATAGCAGTATATATTTTCCTC...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGAGTTTGGTTGTATATTaGTATGTCCATGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRSLVVY*YVHEMA
Trigger: AGCCATTTCATGGACATAGCAATATACAACCAAACT...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCGAGCCAAGTTCACTTTaGCTACCATTTCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIEPSSL*LPFHRS
Trigger: GGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTC...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCCCAGTTCACAACGTaGTCAGTGCAGAGGGATAGA +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQSQFTT*SVQRDR
Trigger: TCTATCCCTCTGCACTGACCACGTTGTGAACTGGGA...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTTTACCCTGTAAGAGCTaGCAAACAGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCLPCKS*QTELRR
Trigger: CCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAA...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCCAGCCTTGAAACATaGTCTGTCTGCACAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQSSLET*SVCTGS
Trigger: ACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGA...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp TGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAAATAACTGTAATTCGCTGGGCATGGTaGTGTGCACCTACTCCCAAC +
Preference number: 4 (lower is better)
Translates to: CPPGTYNLRVINCIQITVIRWAW*CAPTPN
Trigger: GTTGGGAGTAGGTGCACACCACCATGCCCAGCGAAT...TACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAAGCCTCAGTTTATCTTTaGGATGAGGGAGTTAGACAA +
Preference number: 4 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKEASVYL*DEGVRQ
Trigger: TTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGC...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp AAGCTGGGATGGCAGTCCTGTTCCTACATACAAATAACCACCTTCAACATACAGGATGCCATTCTCTGTTaGCATTCTTGTGAAAAGACT +
Preference number: 4 (lower is better)
Translates to: KLGWQSCSYIQITTFNIQDAILC*HSCEKT
Trigger: AGTCTTTTCACAAGAATGTCAACAGAGAATGGCATC...CTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp AAGCTGGGATGGCAGTCCTGTTCCTACATACAAATAACCACCTTCAACATACAGATATTGCTATGTCCATaGAATGGCTTGCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: KLGWQSCSYIQITTFNIQILLCP*NGLHLV
Trigger: GACCAAATGCAAGCCATTTCATGGACATAGCAATAT...CTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGGCACTGTGTTAGGTaGCAAGAGCAGAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKRHCVR*QEQKEE
Trigger: TTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCT...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAAAGGCACTGTGTTAGGTaGCAAGAGCAGAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQRHCVR*QEQKEE
Trigger: TTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCT...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGTCACAACGTGGTCAGTaGAGAGGGATAGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKSQRGQ*RGIEVL
Trigger: CAACACTTCTATCCCTCTGCACTGACCACGTTGTGA...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCGAAATGGCTTGCATTTaGTCTCCCAGTTCACAACGT +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSEMACI*SPSSQR
Trigger: ACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTC...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGGGAGAGAGAACACTaGACTAAGCCTCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKREREH*TKPQHS
Trigger: TGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCT...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTAGTGGAAACCAAGCTTaGTCATGGCTTCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCSGNQA*SWLLSC
Trigger: ACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACT...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366856.3
ENST00000465271.6
CDS-3UTR TCA 90 bp AAGCTGGGATGGCAGTCCTGTTCCTACATACAAATAACCACCTTCAACATACAGTCAACATACAGAGGATaGAAAACACCTTCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: KLGWQSCSYIQITTFNIQSTYRG*KTPSSV
Trigger: AACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGA...CTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp TTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCATAGAATGTGGTAAGTaGCATGGGAGATACTACTAT +
Preference number: 4 (lower is better)
Translates to: LALNFKDQVRFCPTVVCGIECGK*HGRYYY
Trigger: ATAGTAGTATCTCCCATGGCACTTACCACATTCTAT...GCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp TGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAAATAACTGTACCTGAAGGGCACCTTTaGTCGCTCATCTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CPPGTYNLRVINCIQITVPEGHL*SLISSV
Trigger: AACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGG...TACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTAAAGGCTCTCTCAACTaGATGAGTCACTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCKGSLN*MSHCFG
Trigger: ACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTT...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp GTTTGTGTGCAAGGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAAGAAGGTGAAACATTTTaGTCAAAAGTCATCTACATG +
Preference number: 4 (lower is better)
Translates to: VCVQGTVLGAKSRRKKIQEGETF*SKVIYM
Trigger: CATGTAGATGACTTTTGACCAAAATGTTTCACCTTC...TTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTCACTATAAAGATACATaGAGAAGCAGAGCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCHYKDT*RSRASG
Trigger: TCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTG...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366856.3
CDS-3UTR TCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCGATGCCATTCTCTGTTaGCATTCTTGTGAAAAGACT +
Preference number: 4 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIDAILC*HSCEKT
Trigger: AGTCTTTTCACAAGAATGTCAACAGAGAATGGCATC...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCAAAGGCAAGGGAAAATaGTACGTACTAAGATGCACA +
Preference number: 4 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIKGKGK*YVLRCT
Trigger: TGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTT...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCAAAGGCAAGGGAAAATaGTACGTACTAAGATGCACA +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSKGKGK*YVLRCT
Trigger: TGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTT...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTAGGAAGATGAACCAGTaGAATGACATGAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCRKMNQ*NDMSSN
Trigger: ATTACTGCTCATGTCATTGCACTGGTTCATCTTCCT...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATTTATTTCTTTGGCATaGAAAGCTGGGATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQFISLA*KAGMAV
Trigger: GACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAA...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAATACAATTGGAATAACTaGAATACGAAAACCAGACTG +
Preference number: 4 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKEYNWNN*NTKTRL
Trigger: CAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTA...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAAAGTTTGGTTGTATATTaGTATGTCCATGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKESLVVY*YVHEMA
Trigger: AGCCATTTCATGGACATAGCAATATACAACCAAACT...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTAACTGCTCTCCCACCTaGAAGAGTTTACAATATAAC +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCNCSPT*KSLQYN
Trigger: GTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTT...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAACTCCAACAGCTTCGTTaGTTTAAAAAGCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQLQQLR*FKKLEQ
Trigger: CTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAG...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCGAACTACATTGTACCTaGGGAAAATGGCTTATAAGG +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSELHCT*GKWLIR
Trigger: CCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTC...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp TGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAAATAACTGTAGCTCTCTCAACTGCATaGGTCACTGTTTTGGTTACT +
Preference number: 4 (lower is better)
Translates to: CPPGTYNLRVINCIQITVALSTA*VTVLVT
Trigger: AGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGC...TACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp CAGTTGCAAGGATTTAAGTTCTCCAACAGCTTCGTTGCTTTAAAAAGCTTGAGCTACTATAAAGATACATaGAGAAGCAGAGCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: QLQGFKFSNSFVALKSLSYYKDT*RSRASG
Trigger: TCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTA...GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465271.6
CDS-3UTR GCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGGAAGATGAACCAGTaGAATGACATGAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKRKMNQ*NDMSSN
Trigger: ATTACTGCTCATGTCATTGCACTGGTTCATCTTCCT...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCATAGAATGTGGTAAGTaGCATGGGAGATACTACTAT +
Preference number: 4 (lower is better)
Translates to: GRRYKYEWAYSALQEHTIIECGK*HGRYYY
Trigger: ATAGTAGTATCTCCCATGGCACTTACCACATTCTAT...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR GCA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTAGCTTATCTCTCAGTTaGAAGGATTTAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCSLSLS*KDLSSP
Trigger: TGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCT...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAAATTAGCAAGGGCAGTTaGTACCACGATATATATTCC +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQISKGS*YHDIYS
Trigger: GGAATATATATCGTGGTAGCAACTGCCCTTGCTAAT...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366858.7
CDS-3UTR CCA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATGTTCTTTATTTCTTTaGCATGCAAAGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQCSLFL*HAKLGW
Trigger: CCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACA...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR TCA 90 bp GGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAACTATCTCAACTAGAGTaGATAATGCCTTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: GIFCPPGTYNLRVINCIQLSQLE*IMPLDS
Trigger: AGAATCCAAAGGCATTATTCACTCTAGTTGAGATAG...TTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGATAGAATGTGGTAAGTaGCATGGGAGATACTACTAT +
Preference number: 4 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKIECGK*HGRYYY
Trigger: ATAGTAGTATCTCCCATGGCACTTACCACATTCTAT...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR CCA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGGAAGGTGAAACATTTTaGTCAAAAGTCATCTACATG +
Preference number: 4 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKEGETF*SKVIYM
Trigger: CATGTAGATGACTTTTGACCAAAATGTTTCACCTTC...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR GCA 90 bp TGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAAATAACTGTATACAATTGGAATAACTaGAATACGAAAACCAGACTG +
Preference number: 4 (lower is better)
Translates to: CPPGTYNLRVINCIQITVYNWNN*NTKTRL
Trigger: CAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTA...TACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS GCA 90 bp GGGAGCCCACGCCCGCCGCCGGGCGCCTCCCTAGTCCCACACACCTaGCCGGGTGCCCAACTGGCCCACCCTCAGCCGTGTCCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: GSPRPPPGASLVPHT*PGAQLAHPQPCPPA
Trigger: TGCCGGGGGACACGGCTGAGGGTGGGCCAGTTGGGCACCCGGGCAGGTGTGTGGGACTAGGGAGGCGCCCGGCGGCGGGCGTGGGCTCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS GCA 90 bp ACGCCCGCCGCCGGGCGCCTCCCTAGTCCCACACACCTGCCCGGGTaGCCAACTGGCCCACCCTCAGCCGTGTCCCCCGGCAAGGCGTTC +
Preference number: 5 (lower is better)
Translates to: TPAAGRLPSPTHLPG*PTGPPSAVSPGKAF
Trigger: GAACGCCTTGCCGGGGGACACGGCTGAGGGTGGGCCAGTTGGGCACCCGGGCAGGTGTGTGGGACTAGGGAGGCGCCCGGCGGCGGGCGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS CCA 90 bp GGCCCGCACTTATCCCGGCACCCGACTGTCGCAAGCGACCGCCCTTaGGACCCCCAATATCCGACGAAGAGCACGGCGCAGGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GPHLSRHPTVASDRP*DPQYPTKSTAQGLS
Trigger: GGAGAGGCCCTGCGCCGTGCTCTTCGTCGGATATTGGGGGTCCCAAGGGCGGTCGCTTGCGACAGTCGGGTGCCGGGATAAGTGCGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS CCA 90 bp ACTAACACCCGCCAGAACAAAGGGGCGGGTGCCGGGGGTGTTGCGTaGGGAACAGGAGGAGGCAAATGGCCCGCACTTATCCCGGCACCC +
Preference number: 5 (lower is better)
Translates to: TNTRQNKGAGAGGVA*GTGGGKWPALIPAP
Trigger: GGGTGCCGGGATAAGTGCGGGCCATTTGCCTCCTCCTGTTCCCCACGCAACACCCCCGGCACCCGCCCCTTTGTTCTGGCGGGTGTTAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS GCA 90 bp CCAACTGGCCCACCCTCAGCCGTGTCCCCCGGCAAGGCGTTCGCCTaGCTCAGGCAAGGATACGAAGTAGACCGAGAGGAAGATGAGCGC +
Preference number: 5 (lower is better)
Translates to: PTGPPSAVSPGKAFA*LRQGYEVDREEDER
Trigger: GCGCTCATCTTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGGCAGGCGAACGCCTTGCCGGGGGACACGGCTGAGGGTGGGCCAGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468318.5
ENST00000477413.1
CDS TCA 90 bp ACAGGTGTCAGCCACTGCAACTGGCGAAGTAGACCGAGAGGAAGATaGGCGCGCAACAATCGAGGAGAGAGAAGACGAACACCACCGCCT +
Preference number: 5 (lower is better)
Translates to: TGVSHCNWRSRPRGR*ARNNRGERRRTPPP
Trigger: AGGCGGTGGTGTTCGTCTTCTCTCTCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGCCAGTTGCAGTGGCTGACACCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366860.9
CDS TCA 90 bp GTTCGCCTGCCTCAGGCAAGGATACGAAGTAGACCGAGAGGAAGATaGGCGCGCAACAATCGAGGAGAGAGAAGACGAACACCACCGCCT +
Preference number: 5 (lower is better)
Translates to: VRLPQARIRSRPRGR*ARNNRGERRRTPPP
Trigger: AGGCGGTGGTGTTCGTCTTCTCTCTCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGGCAGGCGAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468318.5
ENST00000477413.1
CDS-3UTR CAA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTCCAGTGCACTCCAGCTaGGGCGACAGGGCAAGACTC +
Preference number: 5 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTPVHSS*GDRARL
Trigger: GAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGG...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGAGAGGGATAGAAGTGTaGATCTGGCACCACGTGGCG +
Preference number: 5 (lower is better)
Translates to: PFLLCVARALLPALKHGLRGIEV*IWHHVA
Trigger: CGCCACGTGGTGCCAGATCAACACTTCTATCCCTCT...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGGGCTTAGTGGCTCCCTaGCTTCTGCCAAGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRGLVAP*LLPRLD
Trigger: GTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCC...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCCTGTTACACAGCTTCTaGGCCCTGTGCCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGLLHSF*ALCLTE
Trigger: TTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAG...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp ACCACAAGGAGCAATTTCTGTGACCCCAAAGAGGCCAGCAGAGCCAAGTTCACTAGGCAGGAGAATCGCTaGAACCCAGAAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: TTRSNFCDPKEASRAKFTRQENR*NPESRG
Trigger: ACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCT...AGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCAGGCAGGAGAATCGCTaGAACCCAGAAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGRQENR*NPESRG
Trigger: ACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCT...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCTCAGCAGGAACTACATaGTACCTGGGGAAAATGGCT +
Preference number: 5 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGSAGTT*YLGKMA
Trigger: AGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGA...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp AGTGTTGATCTGGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGACAGCAAGAGCCAAGTTCACTTaGCCTACCATTTCACCGTTC +
Preference number: 5 (lower is better)
Translates to: SVDLAPRGAPKGSISQTARAKFT*PTISPF
Trigger: GAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCT...TGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS CCA 90 bp TTACCCATACAAAACGGCACAGTGAAGGAAGCAACTTCGCTCCTTTaGCGAATGAGTCAACTCCTGGATGTGAAAGGTCCCTGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: LPIQNGTVKEATSLL*RMSQLLDVKGPCKY
Trigger: GTACTTGCAGGGACCTTTCACATCCAGGAGTTGACTCATTCGCCAAAGGAGCGAAGTTGCTTCCTTCACTGTGCCGTTTTGTATGGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS-3UTR CAA 90 bp AGTGTTGATCTGGCACCACGTGGCGCACCAAAAGGCTCAATTTCACAGACAGCAAAACACCTTCAAGTGTaGGCGTTCAGGCTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SVDLAPRGAPKGSISQTAKHLQV*AFRLKL
Trigger: CAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTT...TGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAAAGAGGGATAGAAGTGTaGATCTGGCACCACGTGGCG +
Preference number: 5 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKERGIEV*IWHHVA
Trigger: CGCCACGTGGTGCCAGATCAACACTTCTATCCCTCT...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTATTTCACCGTTCCTTTaGTGTGTTGCCAGGGCACTA +
Preference number: 5 (lower is better)
Translates to: SPFLLCVARALLPALKHGISPFL*CVARAL
Trigger: TAGTGCCCTGGCAACACACAAAAGGAACGGTGAAAT...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp GGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAACCAGTGCACTCCAGCTaGGGCGACAGGGCAAGACTC +
Preference number: 5 (lower is better)
Translates to: GIFCPPGTYNLRVINCIQPVHSS*GDRARL
Trigger: GAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGG...TTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS TCA 90 bp GCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCTACCACGATATATATTCCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: ASWISLPLLSQPRLR*LARAVATTIYIPSG
Trigger: GCCACTTGGAATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366858.7
CDS TCA 90 bp GCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCTACCACATTTCACCGTTCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: ASWISLPLLSQPRLR*LARAVATTFHRSFC
Trigger: ACAAAAGGAACGGTGAAATGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469200.1
CDS-3UTR CAA 90 bp GTTTGTGTGCAAGGCACTGTGTTAGGTGCCAAGAGCAGAAGGAAGAAGATACAAAGACCAGGTCAGGTTTaGTCCTACTGTAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VCVQGTVLGAKSRRKKIQRPGQV*SYCSLW
Trigger: CCACAGACTACAGTAGGACAAAACCTGACCTGGTCT...TTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR CAA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTAAACACCTTCAAGTGTaGGCGTTCAGGCTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SPFLLCVARALLPALKHGKHLQV*AFRLKL
Trigger: CAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTT...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCTTAGTGGCTCCCTaGCTTCTGCCAAGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCGLVAP*LLPRLD
Trigger: GTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCC...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAGAGCCAAGTTCACTTaGCCTACCATTTCACCGTTC +
Preference number: 5 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQRAKFT*PTISPF
Trigger: GAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCT...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp AAGCTGGGATGGCAGTCCTGTTCCTACATACAAATAACCACCTTCAACATACAGAGACCAGGTCAGGTTTaGTCCTACTGTAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: KLGWQSCSYIQITTFNIQRPGQV*SYCSLW
Trigger: CCACAGACTACAGTAGGACAAAACCTGACCTGGTCT...CTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp AGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAAAGCTGCCTCAGAGGGCGTTCAGGCTAAAGTaGAGAACTAGAAATCTACAG +
Preference number: 5 (lower is better)
Translates to: RRKGRVKGLFSKQKLPQRAFRLK*RTRNLQ
Trigger: CTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGC...CCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp TCACCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTGCGTTCAGGCTAAAGTaGAGAACTAGAAATCTACAG +
Preference number: 5 (lower is better)
Translates to: SPFLLCVARALLPALKHGAFRLK*RTRNLQ
Trigger: CTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGC...ACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp CTACTTCCAGCCTTGAAACATGGTCTGTCTGCACAGGGAGTTTGGCTTAGTGGCAGGAACAGAGTTTGGTaGTATATTGCTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: LLPALKHGLSAQGVWLSGRNRVW*YIAMSM
Trigger: CATGGACATAGCAATATACAACCAAACTCTGTTCCT...GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp CCGTTCCTTTTGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAACATGGTCTGAGGACTGAGGATAAATaGCCAGGTTTATTTTACCCT +
Preference number: 5 (lower is better)
Translates to: PFLLCVARALLPALKHGLRTEDK*PGLFYP
Trigger: AGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCT...CAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp TTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCGCACTACTTCCAGCCTaGAAACATGGTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LALNFKDQVRFCPTVVCGALLPA*KHGLSA
Trigger: TGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGC...GCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp CATTTGGTCTCCCAGTTCACAACGTGGTCAGTGCAGAGGGATAGAAGTGTTGATCCCACTTTCCTGGCTTaGATAGACAAGCAATACAAG +
Preference number: 5 (lower is better)
Translates to: HLVSQFTTWSVQRDRSVDPTFLA*IDKQYK
Trigger: CTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGG...ATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp GAGGCACAGGAAGTTAGGAGGAAAGGCAGAGTGAAGGGACTGTTTTCTAAGCAAGTGTTCTTTATTTCTTaGGCATGCAAAGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: EAQEVRRKGRVKGLFSKQVFFIS*ACKAGM
Trigger: CATCCCAGCTTTGCATGCCAAAGAAATAAAGAACAC...TTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp ATGCCTTTGGATTCTCCCACAGAACACAGTCATGTTTTGCCCAAATGCCAGTGCGCTCATCTCTTCAGTTaGCCCTTTAAAGTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: MPLDSPTEHSHVLPKCQCAHLFS*PFKVCS
Trigger: AGAACACACTTTAAAGGGCAAACTGAAGAGATGAGC...GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp AAGGAGGTGAACTGCTCTCCCACCTGCAAGAGTTTACAATATAACTCCAAGGAAATTTCACCGTTCCTTTaGTGTGTTGCCAGGGCACTA +
Preference number: 5 (lower is better)
Translates to: KEVNCSPTCKSLQYNSKEISPFL*CVARAL
Trigger: TAGTGCCCTGGCAACACACAAAAGGAACGGTGAAAT...TTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp GGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCCTGTTACACAGCTTCTaGGCCCTGTGCCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: GRRYKYEWAYSALQEHTILLHSF*ALCLTE
Trigger: TTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAG...GATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS TCA 90 bp GCATCTTGGATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCTACCACTATAAAGATACATGAAGAA +
Preference number: 5 (lower is better)
Translates to: ASWISLPLLSQPRLR*LARAVATTIKIHEE
Trigger: TTCTTCATGTATCTTTATAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366856.3
CDS-3UTR CAA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTAGACCAGGTCAGGTTTaGTCCTACTGTAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCRPGQV*SYCSLW
Trigger: CCACAGACTACAGTAGGACAAAACCTGACCTGGTCT...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR CAA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGCACTACTTCCAGCCTaGAAACATGGTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCALLPA*KHGLSA
Trigger: TGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGC...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp TTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGGCCCCACTTTCCTGGCTTaGATAGACAAGCAATACAAG +
Preference number: 5 (lower is better)
Translates to: LALNFKDQVRFCPTVVCGPTFLA*IDKQYK
Trigger: CTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGG...GCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS CCA 90 bp CTCTGCGATCCATATCAGATCCCTAAAGCTATAGCCTTCAGTCTCTaGATTTCTTACTGTAGGCTGCAGTCATCTTTGTATTACACAGAC +
Preference number: 5 (lower is better)
Translates to: LCDPYQIPKAIAFSL*ISYCRLQSSLYYTD
Trigger: GTCTGTGTAATACAAAGATGACTGCAGCCTACAGTAAGAAATCCAGAGACTGAAGGCTATAGCTTTAGGGATCTGATATGGATCGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366860.9
CDS-3UTR CAA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGGAACTGAGCTGCATCTaGGATTTCGCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKELSCI*DFASSS
Trigger: AGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTC...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR CAA 90 bp GGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAAGAACTGAGCTGCATCTaGGATTTCGCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GIFCPPGTYNLRVINCIQELSCI*DFASSS
Trigger: AGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTC...TTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR CAA 90 bp AAGCTGGGATGGCAGTCCTGTTCCTACATACAAATAACCACCTTCAACATACAGAGGACTGAGGATAAATaGCCAGGTTTATTTTACCCT +
Preference number: 5 (lower is better)
Translates to: KLGWQSCSYIQITTFNIQRTEDK*PGLFYP
Trigger: AGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCT...CTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGTGTTCTTTATTTCTTaGGCATGCAAAGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCVFFIS*ACKAGM
Trigger: CATCCCAGCTTTGCATGCCAAAGAAATAAAGAACAC...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp TTCTTAGCTCTTAACTTCAAAGACCAGGTCAGGTTTTGTCCTACTGTAGTCTGTGCTCATCTCTTCAGTTaGCCCTTTAAAGTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: FLALNFKDQVRFCPTVVCAHLFS*PFKVCS
Trigger: AGAACACACTTTAAAGGGCAAACTGAAGAGATGAGC...ACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS-3UTR CAA 90 bp AAGGAAGAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAAAAGTGGAAACCAAGCTaGATCATGGCTTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: KEEDTNMNGHILPSRNIQKWKPS*IMASFM
Trigger: CATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTT...TTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366856.3
ENST00000465271.6
CDS-3UTR CAA 90 bp TGCCCTCCAGGAACATACAATCTAAGAGTGATTAATTGCATACAAATAACTGTAGAACTGAGCTGCATCTaGGATTTCGCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: CPPGTYNLRVINCIQITVELSCI*DFASSS
Trigger: AGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTC...TACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366856.3
ENST00000366857.9
ENST00000366858.7
ENST00000465271.6
CDS-3UTR CAA 90 bp GAAGATACAAATATGAATGGGCATATTCTGCCCTCCAGGAACATACAATCTAAGAGGAACAGAGTTTGGTaGTATATTGCTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: EDTNMNGHILPSRNIQSKRNRVW*YIAMSM
Trigger: CATGGACATAGCAATATACAACCAAACTCTGTTCCT...CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366857.9
ENST00000465271.6
CDS GCA 72 bp GCCGGGCGCCTCCCTAGTCCCACACACCTGCCCGGGTaGCCAACTGGCCCACCCTCAGCCGTGTCCCCCGGC +
Preference number: 6 (lower is better)
Translates to: AGRLPSPTHLPG*PTGPPSAVSPG
Trigger: GCCGGGGGACACGGCTGAGGGTGGGCCAGTTGGGCACCCGGGCAGGTGTGTGGGACTAGGGAGGCGCCCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS GCA 72 bp CGCCCGCCGCCGGGCGCCTCCCTAGTCCCACACACCTaGCCGGGTGCCCAACTGGCCCACCCTCAGCCGTGT +
Preference number: 6 (lower is better)
Translates to: RPPPGASLVPHT*PGAQLAHPQPC
Trigger: ACACGGCTGAGGGTGGGCCAGTTGGGCACCCGGGCAGGTGTGTGGGACTAGGGAGGCGCCCGGCGGCGGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS CAA 90 bp TGGCCCGCACTTATCCCGGCACCCGACTGTCGCAAGCGACCGCCCTaGGGACCCCCAATATCCGACGAAGAGCACGGCGCAGGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: WPALIPAPDCRKRPP*GPPISDEEHGAGPL
Trigger: GAGAGGCCCTGCGCCGTGCTCTTCGTCGGATATTGGGGGTCCCAAGGGCGGTCGCTTGCGACAGTCGGGTGCCGGGATAAGTGCGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS CCA 72 bp TTATCCCGGCACCCGACTGTCGCAAGCGACCGCCCTTaGGACCCCCAATATCCGACGAAGAGCACGGCGCAG +
Preference number: 6 (lower is better)
Translates to: LSRHPTVASDRP*DPQYPTKSTAQ
Trigger: CTGCGCCGTGCTCTTCGTCGGATATTGGGGGTCCCAAGGGCGGTCGCTTGCGACAGTCGGGTGCCGGGATAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS CAA 72 bp CTTATCCCGGCACCCGACTGTCGCAAGCGACCGCCCTaGGGACCCCCAATATCCGACGAAGAGCACGGCGCA +
Preference number: 6 (lower is better)
Translates to: LIPAPDCRKRPP*GPPISDEEHGA
Trigger: TGCGCCGTGCTCTTCGTCGGATATTGGGGGTCCCAAGGGCGGTCGCTTGCGACAGTCGGGTGCCGGGATAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS GCA 72 bp CCACCCTCAGCCGTGTCCCCCGGCAAGGCGTTCGCCTaGCTCAGGCAAGGATACGAAGTAGACCGAGAGGAA +
Preference number: 6 (lower is better)
Translates to: PPSAVSPGKAFA*LRQGYEVDREE
Trigger: TTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGGCAGGCGAACGCCTTGCCGGGGGACACGGCTGAGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468318.5
ENST00000477413.1
CDS TCA 72 bp AGCCACTGCAACTGGCGAAGTAGACCGAGAGGAAGATaGGCGCGCAACAATCGAGGAGAGAGAAGACGAACA +
Preference number: 6 (lower is better)
Translates to: SHCNWRSRPRGR*ARNNRGERRRT
Trigger: TGTTCGTCTTCTCTCTCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGCCAGTTGCAGTGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366860.9
CDS TCA 72 bp CCTCAGGCAAGGATACGAAGTAGACCGAGAGGAAGATaGGCGCGCAACAATCGAGGAGAGAGAAGACGAACA +
Preference number: 6 (lower is better)
Translates to: PQARIRSRPRGR*ARNNRGERRRT
Trigger: TGTTCGTCTTCTCTCTCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468318.5
ENST00000477413.1
CDS CCA 72 bp CAAAACGGCACAGTGAAGGAAGCAACTTCGCTCCTTTaGCGAATGAGTCAACTCCTGGATGTGAAAGGTCCC +
Preference number: 6 (lower is better)
Translates to: QNGTVKEATSLL*RMSQLLDVKGP
Trigger: GGGACCTTTCACATCCAGGAGTTGACTCATTCGCCAAAGGAGCGAAGTTGCTTCCTTCACTGTGCCGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS CAA 72 bp AGCAAGGGCAGTTGCTACCACATTTCACCGTTCCTTTaGTGTGTTGCCAGGGCACTACTTCCAGCCTTGAAA +
Preference number: 6 (lower is better)
Translates to: SKGSCYHISPFL*CVARALLPALK
Trigger: TTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGTGGTAGCAACTGCCCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469200.1
CDS CAA 72 bp ACAAAACGGCACAGTGAAGGAAGCAACTTCGCTCCTTaGGCGAATGAGTCAACTCCTGGATGTGAAAGGTCC +
Preference number: 6 (lower is better)
Translates to: TKRHSEGSNFAP*ANESTPGCERS
Trigger: GGACCTTTCACATCCAGGAGTTGACTCATTCGCCAAAGGAGCGAAGTTGCTTCCTTCACTGTGCCGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS TCA 72 bp ATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCTACCACATTTCACCGT +
Preference number: 6 (lower is better)
Translates to: ISLPLLSQPRLR*LARAVATTFHR
Trigger: ACGGTGAAATGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469200.1
CDS GCA 72 bp CAGTTGCTACCACATTTCACCGTTCCTTTTGTGTGTTaGCAGGGCACTACTTCCAGCCTTGAAACATGGTCT +
Preference number: 6 (lower is better)
Translates to: QLLPHFTVPFVC*QGTTSSLETWS
Trigger: AGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGTGGTAGCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469200.1
CDS CAA 90 bp ATTACCCATACAAAACGGCACAGTGAAGGAAGCAACTTCGCTCCTTaGGCGAATGAGTCAACTCCTGGATGTGAAAGGTCCCTGCAAGTA +
Preference number: 6 (lower is better)
Translates to: ITHTKRHSEGSNFAP*ANESTPGCERSLQV
Trigger: TACTTGCAGGGACCTTTCACATCCAGGAGTTGACTCATTCGCCAAAGGAGCGAAGTTGCTTCCTTCACTGTGCCGTTTTGTATGGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477413.1
CDS TCA 72 bp ATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCTACCACTATAAAGATA +
Preference number: 6 (lower is better)
Translates to: ISLPLLSQPRLR*LARAVATTIKI
Trigger: TATCTTTATAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366856.3
CDS TCA 72 bp ATTTCGCTTCCTCTTCTTTCTCAGCCGAGGTTACGGTaGTTAGCAAGGGCAGTTGCTACCACGATATATATT +
Preference number: 6 (lower is better)
Translates to: ISLPLLSQPRLR*LARAVATTIYI
Trigger: AATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366858.7
CDS CCA 72 bp CCATATCAGATCCCTAAAGCTATAGCCTTCAGTCTCTaGATTTCTTACTGTAGGCTGCAGTCATCTTTGTAT +
Preference number: 6 (lower is better)
Translates to: PYQIPKAIAFSL*ISYCRLQSSLY
Trigger: ATACAAAGATGACTGCAGCCTACAGTAAGAAATCCAGAGACTGAAGGCTATAGCTTTAGGGATCTGATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366860.9
CDS CAA 72 bp AGTCTCTGGATTTCTTACTGTAGGCTGCAGTCATCTTaGTATTACACAGACACAGACCTGAAACATGTTTCT +
Preference number: 6 (lower is better)
Translates to: SLWISYCRLQSS*YYTDTDLKHVS
Trigger: AGAAACATGTTTCAGGTCTGTGTCTGTGTAATACAAAGATGACTGCAGCCTACAGTAAGAAATCCAGAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366860.9
CDS GCA 72 bp CTCAATAAAATGTCAGCTGATGTTATACTAATACTCTaGGATCCATATCAGATCCCTAAAGCTATAGCCTTC +
Preference number: 6 (lower is better)
Translates to: LNKMSADVILIL*DPYQIPKAIAF
Trigger: GAAGGCTATAGCTTTAGGGATCTGATATGGATCGCAGAGTATTAGTATAACATCAGCTGACATTTTATTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366860.9