RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNGB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000070729

Ensembl transcript IDs: ENST00000251102.13, ENST00000311183.8, ENST00000562761.1, ENST00000564448.5, ENST00000564450.1, ENST00000564654.1, ENST00000565942.1, ENST00000567568.1, ENST00000569643.1

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTGGGAGTGTGTGGAGAGGGAGGGGTTCGCTGTTCAAATAGGGTaGGGTGTCAGTGGCCACCTCCCCCGGGAAGGTCTTCTCTTCAGG +
Preference number: 1 (lower is better)
Translates to: AWECVEREGFAVQIG*GVSGHLPREGLLFR
Trigger: CCTGAAGAGAAGACCTTCCCGGGGGAGGTGGCCACTGACACCCCACCCTATTTGAACAGCGAACCCCTCCCTCTCCACACACTCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR TCA 90 bp GTGAGTAACGGACTGATCCCTGCTGGCGAATGGGGTTTCTCAGGATaGCAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAG +
Preference number: 1 (lower is better)
Translates to: VSNGLIPAGEWGFSG*QAEDAPTGLFLLAE
Trigger: CTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAACCCCATTCGCCAGCAGGGATCAGTCCGTTACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR TCA 90 bp CTAGGGAGAACCTCTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTaGCGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTC +
Preference number: 1 (lower is better)
Translates to: LGRTSSGKNCILSRC*RCQVPHWGLCTRPL
Trigger: GAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGTTCTCCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR CCA 90 bp GCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGGAGAACCTCTTCTaGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACC +
Preference number: 1 (lower is better)
Translates to: ALEGESVARPRENLF*EKLYPVEVLTVPGT
Trigger: GGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGTTCTCCCTAGGCCTGGCCACACTCTCTCCTTCCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR CCA 90 bp TTGTTGCTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTaGCCAGGCCTAGGGAGAACCTCTTCTGGGAAAAACTGTATCCTG +
Preference number: 1 (lower is better)
Translates to: LLLLIGVPKPWKERV*PGLGRTSSGKNCIL
Trigger: CAGGATACAGTTTTTCCCAGAAGAGGTTCTCCCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAGCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR GCA 90 bp ATAAGCACTAACTACCTTAATGGGCATCTAGCCCCCTACTGTGATTaGCCGCAAAGGAAAACCGCGTCCCAAGCTCAGCTCAGAACCATG +
Preference number: 1 (lower is better)
Translates to: ISTNYLNGHLAPYCD*PQRKTASQAQLRTM
Trigger: CATGGTTCTGAGCTGAGCTTGGGACGCGGTTTTCCTTTGCGGGCAATCACAGTAGGGGGCTAGATGCCCATTAAGGTAGTTAGTGCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR TCA 90 bp TTACCCGGATCACGTGACAAGCCATCAACTAGACAAATCTGTTTCTaGCTCTGGGGTTTGGAAATGCTTAGACCAGCCTGGGGACTCCCA +
Preference number: 1 (lower is better)
Translates to: LPGSRDKPSTRQICF*LWGLEMLRPAWGLP
Trigger: TGGGAGTCCCCAGGCTGGTCTAAGCATTTCCAAACCCCAGAGTCAGAAACAGATTTGTCTAGTTGATGGCTTGTCACGTGATCCGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR TCA 90 bp GCTAGCAGCTCCTGGCCAGTAAGTCCATTTCCCTTCTATCTGTTCTaGGATAATGGCATTGCATTGGAATTGAATAGAGTCTGGGGAAGA +
Preference number: 1 (lower is better)
Translates to: ASSSWPVSPFPFYLF*DNGIALELNRVWGR
Trigger: TCTTCCCCAGACTCTATTCAATTCCAATGCAATGCCATTATCTCAGAACAGATAGAAGGGAAATGGACTTACTGGCCAGGAGCTGCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR CCA 90 bp GTGACAAGCCATCAACTAGACAAATCTGTTTCTGACTCTGGGGTTTaGAAATGCTTAGACCAGCCTGGGGACTCCCACATTCTTTCATTT +
Preference number: 1 (lower is better)
Translates to: VTSHQLDKSVSDSGV*KCLDQPGDSHILSF
Trigger: AAATGAAAGAATGTGGGAGTCCCCAGGCTGGTCTAAGCATTTCCAAACCCCAGAGTCAGAAACAGATTTGTCTAGTTGATGGCTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR TCA 90 bp GTAAGTGCTGTCATCAGCTGGGAGATTTCATTTTCTAGGATTAATTaGAGTTGCTGCCACCATCTCTACAGCGAGAGTGTCAAAAGTGAG +
Preference number: 1 (lower is better)
Translates to: VSAVISWEISFSRIN*SCCHHLYSESVKSE
Trigger: CTCACTTTTGACACTCTCGCTGTAGAGATGGTGGCAGCAACTTCAATTAATCCTAGAAAATGAAATCTCCCAGCTGATGACAGCACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR CCA 90 bp TGGAATTCCAGGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATaGCCTAATACTAGAATACTAGATTTTGTTTTTAATCACTCACTC +
Preference number: 1 (lower is better)
Translates to: WNSRSFMFTVAGGNK*PNTRILDFVFNHSL
Trigger: GAGTGAGTGATTAAAAACAAAATCTAGTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACCTGGAATTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR CCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGGGGCGCAGCGGGCGCTaGGGACACACCTGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAGRSGR*GHTCWN
Trigger: GTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCC...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR GCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGCGCTGGGGACACACCTaGTGGAACTGCGCGCGGGAT +
Preference number: 2 (lower is better)
Translates to: CNLSSSGPAPRGAESGLARWGHT*WNCARD
Trigger: ATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCG...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTGGGGACACACCTGCTaGAACTGCGCGCGGGATCCG +
Preference number: 2 (lower is better)
Translates to: TCRAQAQPREELSRGWRAWGHTC*NCARDP
Trigger: CGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR TCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTAAAAGCATCTTCTCTTaGGCCGTGGGGGAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: TCRAQAQPREELSRGWRAKSIFS*AVGEGG
Trigger: CCCACCTTCCCCCACGGCTCAAGAGAAGATGCTTTT...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR CCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGTGGGGACACACCTGCTaGAACTGCGCGCGGGATCCG +
Preference number: 2 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWWGHTC*NCARDP
Trigger: CGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCA...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR CCA 90 bp GTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGACCCCTTGTTCTGGTCTaGGAGGCTCTGGGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: VLTVPGTTLGAVHASSQRPLVLV*EALGLV
Trigger: CACCAGCCCCAGAGCCTCCCAGACCAGAACAAGGGG...TCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CCA 90 bp GTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGACACCACGCCCGGCTATaGGCCTTTTCCACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: VLTVPGTTLGAVHASSQRHHARL*AFSTAL
Trigger: GAGGGCTGTGGAAAAGGCCCATAGCCGGGCGTGGTG...TCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGGGGCGCAGCGGGCGCTaGGGACACACCTGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: SESSGTRTLDATCRAQAQGRSGR*GHTCWN
Trigger: GTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCC...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR CCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATAGGGTGGGGTGTCAGTaGCCACCTCCCCCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNRVGCQ*PPPPGR
Trigger: CCTTCCCGGGGGAGGTGGCCACTGACACCCCACCCT...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CCA 90 bp GCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATCCCCTTGTCCTGCCTaGGAGTGTGTGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: ADGARYHTGGCARVLSKRSPCPA*ECVERE
Trigger: CTCCCTCTCCACACACTCCCAGGCAGGACAAGGGGA...TCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR GCA 90 bp GCTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGTGGCTCCCCTTGTCCTaGCTGGGAGTGTGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: AAHWCPQALEGESVARPRWLPLS*LGVCGE
Trigger: CTCTCCACACACTCCCAGGCAGGACAAGGGGAGCCA...CCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR GCA 90 bp GCTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGCCACACTGGGGGCTGTaGACGCGTCCTCTCAAAGAG +
Preference number: 2 (lower is better)
Translates to: AAHWCPQALEGESVARPRPHWGL*TRPLKE
Trigger: CTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGG...CCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR GCA 90 bp GACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCAGGGTCTCACTGTGTTaGCCACGGTGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: DGARYHTGGCARVLSKRCRVSLC*PRWSRT
Trigger: AGTTCGAGACCACCGTGGGCAACACAGTGAGACCCT...GCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CCA 90 bp CACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTCCTCCGCCTTCCCCTTGTTCTaGTCTGGGAGGCTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: HWGLCTRPLKEMLNTESSAFPLF*SGRLWG
Trigger: GCCCCAGAGCCTCCCAGACCAGAACAAGGGGAAGGC...GGAGGACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR TCA 90 bp CGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGCCAGTAAGTCAGAGCTGCAGCCACTaGGGTCACGACTACGGAAAA +
Preference number: 2 (lower is better)
Translates to: RAVPPGRGRNASSSWPVSQSCSH*GHDYGK
Trigger: TTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTG...ACTTACTGGCCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR GCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGGAGGTCTCGCTATGTTaGCCAGTCTGCTCTCCAACT +
Preference number: 2 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWEVSLC*PVCSPT
Trigger: AGTTGGAGAGCAGACTGGGCAACATAGCGAGACCTC...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR GCA 90 bp GGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGGGGGCCTAAATCTTGCAGGCTaGCCATGGCTGGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: GKTVSCRGADGARYHTGGLNLAG*PWLAFP
Trigger: GGGGAAGGCCAGCCATGGGCAGCCTGCAAGATTTAG...GCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATCAGGCTGCCCATGGCTaGCCTTCCCCTTGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNQAAHG*PSPCSG
Trigger: ACCAGAACAAGGGGAAGGCCAGCCATGGGCAGCCTG...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGAACGCTAGCAGCTCCTaGCCAGTAAGTCCATTTCCC +
Preference number: 2 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRNASSS*PVSPFP
Trigger: GGGAAATGGACTTACTGGCCAGGAGCTGCTAGCGTT...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR CCA 90 bp CTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTCTGCCTGGGAGTGTGTaGAGAGGGAGGGGTTCGCTG +
Preference number: 2 (lower is better)
Translates to: LLGKTVSCRGADGARYHTLPGSV*RGRGSL
Trigger: CAGCGAACCCCTCCCTCTCCACACACTCCCAGGCAG...AGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGAGCTTCCCAAACTGCTaGGATTGCAGATGTGAACCA +
Preference number: 2 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWSFPNC*DCRCEP
Trigger: TGGTTCACATCTGCAATCCCAGCAGTTTGGGAAGCT...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR TCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCAGAGCTGCAGCCACTaGGGTCACGACTACGGAAAA +
Preference number: 2 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPQSCSH*GHDYGK
Trigger: TTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR GCA 90 bp ACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCAGTCCTCTCAAAGAGATaGTCAATACTGAGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: TVSCRGADGARYHTGGCAVLSKR*SILSPP
Trigger: TGGAGGACTCAGTATTGAGCATCTCTTTGAGAGGAC...TGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CCA 90 bp TACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTGCTGTTCAAATAGGGTaGGGTGTCAGTGGCCACCTC +
Preference number: 2 (lower is better)
Translates to: YHTGGCARVLSKRCSILSAVQIG*GVSGHL
Trigger: GAGGTGGCCACTGACACCCCACCCTATTTGAACAGC...ACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR GCA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACACACACCTGCTGGAACTaGGCGCGGGATCCGCCTCAC +
Preference number: 2 (lower is better)
Translates to: GQIHTDICKPSKASEQLTHTCWN*ARDPPH
Trigger: GTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTG...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR GCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCGCTGGGGACACACCTaGTGGAACTGCGCGCGGGAT +
Preference number: 2 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNRWGHT*WNCARD
Trigger: ATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR GCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACGAGTCGGGGCTGGCGTaGTGGCGGGACGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: GPLCSLLQVETNGLILEYESGLA*WRDGQS
Trigger: GCTCTGACCGTCCCGCCAGCACGCCAGCCCCGACTC...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR GCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGATGACAGGCAGAGGATaGTCCTACCGGGCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: STARVSKVSNGLIPAGEWMTGRG*SYRAVP
Trigger: AGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCAT...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATGAGCTGAGTCGGGGCTaGCGTGCTGGCGGGACGGTC +
Preference number: 2 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNELSRG*RAGGTV
Trigger: GACCGTCCCGCCAGCACGCCAGCCCCGACTCAGCTC...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR GCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTCACACCTGCTGGAACTaGGCGCGGGATCCGCCTCAC +
Preference number: 2 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFHTCWN*ARDPPH
Trigger: GTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTG...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR GCA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACAGCCCCCTACTGTGATTaGCCGCAAAGGAAAACCGCG +
Preference number: 2 (lower is better)
Translates to: GQIHTDICKPSKASEQLTAPYCD*PQRKTA
Trigger: CGCGGTTTTCCTTTGCGGGCAATCACAGTAGGGGGC...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR CCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTTCTTCTCTTGAGCCGTaGGGGAAGGTGGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFSSLEP*GKVGRW
Trigger: CCAGCGCCCCACCTTCCCCCACGGCTCAAGAGAAGA...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR TCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAAAAGCATCTTCTCTTaGGCCGTGGGGGAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNKSIFS*AVGEGG
Trigger: CCCACCTTCCCCCACGGCTCAAGAGAAGATGCTTTT...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR TCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACTCTAGCCCCCTACTGTaGTTGCCCGCAAAGGAAAAC +
Preference number: 2 (lower is better)
Translates to: GPLCSLLQVETNGLILEYSSPLL*LPAKEN
Trigger: GTTTTCCTTTGCGGGCAATCACAGTAGGGGGCTAGA...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR TCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTAGGGACTCGAACACTTaGTGCAACTTGTCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFRDSNT*CNLSSS
Trigger: TGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCT...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR TCA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACAATCATAAAAGCAACATaGCACGATCTGGAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: GQIHTDICKPSKASEQLTIIKAT*HDLESF
Trigger: AAAGCTTTCCAGATCGTGTCATGTTGCTTTTATGAT...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR GCA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCGTTTGCTTTTGTTTCTaGTGCTGTTTTGTAGAGATG +
Preference number: 2 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSVCFCF*CCFVEM
Trigger: CATCTCTACAAAACAGCAGCAGAAACAAAAGCAAAC...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAAGCTTCCCATGTATTaGAGCCTCATTTTATCCCTC +
Preference number: 2 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNKLPMY*SLILSL
Trigger: GAGGGATAAAATGAGGCTCCAATACATGGGAAGCTT...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR TCA 72 bp GGACTGATCCCTGCTGGCGAATGGGGTTTCTCAGGATaGCAGGCAGAGGATGCTCCTACCGGGCTGTTCCTC +
Preference number: 3 (lower is better)
Translates to: GLIPAGEWGFSG*QAEDAPTGLFL
Trigger: GAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAACCCCATTCGCCAGCAGGGATCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR TCA 72 bp ACCTCTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTaGCGGTGCCAGGTACCACACTGGGGGCTGTGCACG +
Preference number: 3 (lower is better)
Translates to: TSSGKNCILSRC*RCQVPHWGLCT
Trigger: CGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR-3UTR CAA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGGAAAAGCATCTTCTCTaGAGCCGTGGGGGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: SESSGTRTLDATCRAQAQEKHLL*SRGGRW
Trigger: CCACCTTCCCCCACGGCTCAAGAGAAGATGCTTTTC...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
3UTR-3UTR CAA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGGGCATTGCATTGGAATaGAATAGAGTCTGGGGAAGA +
Preference number: 3 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWGIALE*NRVWGR
Trigger: TCTTCCCCAGACTCTATTCAATTCCAATGCAATGCC...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR CCA 72 bp CTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTaGCCAGGCCTAGGGAGAACCTCTTCTGGGAAAAAC +
Preference number: 3 (lower is better)
Translates to: LIGVPKPWKERV*PGLGRTSSGKN
Trigger: GTTTTTCCCAGAAGAGGTTCTCCCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR GCA 72 bp AACTACCTTAATGGGCATCTAGCCCCCTACTGTGATTaGCCGCAAAGGAAAACCGCGTCCCAAGCTCAGCTC +
Preference number: 3 (lower is better)
Translates to: NYLNGHLAPYCD*PQRKTASQAQL
Trigger: GAGCTGAGCTTGGGACGCGGTTTTCCTTTGCGGGCAATCACAGTAGGGGGCTAGATGCCCATTAAGGTAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR GCA 72 bp CACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATaGTCAATACTGAGTCCTCCATCCATGGGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: HTGGCARVLSKR*SILSPPSMGLF
Trigger: AAAAAGCCCCATGGATGGAGGACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
3UTR TCA 72 bp GTCATCAGCTGGGAGATTTCATTTTCTAGGATTAATTaGAGTTGCTGCCACCATCTCTACAGCGAGAGTGTC +
Preference number: 3 (lower is better)
Translates to: VISWEISFSRIN*SCCHHLYSESV
Trigger: GACACTCTCGCTGTAGAGATGGTGGCAGCAACTTCAATTAATCCTAGAAAATGAAATCTCCCAGCTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR-3UTR CAA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACAGTACGTTGTTGTTGTTaGCTTTTGTTTCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GQIHTDICKPSKASEQLTVRCCC*LLFLLL
Trigger: CAGCAGCAGAAACAAAAGCAAACAACAACAACGTAC...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR TCA 72 bp TCCTGGCCAGTAAGTCCATTTCCCTTCTATCTGTTCTaGGATAATGGCATTGCATTGGAATTGAATAGAGTC +
Preference number: 3 (lower is better)
Translates to: SWPVSPFPFYLF*DNGIALELNRV
Trigger: GACTCTATTCAATTCCAATGCAATGCCATTATCTCAGAACAGATAGAAGGGAAATGGACTTACTGGCCAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR GCA 72 bp TTGTTTTTAGTGGATGGACAAATACATACAGACATTTaGAAACCTTCAAAGGCCTCTGAGCAGCTCACATTT +
Preference number: 3 (lower is better)
Translates to: LFLVDGQIHTDI*KPSKASEQLTF
Trigger: AAATGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCACTAAAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGAGCTGAGTCGGGGCTaGCGTGCTGGCGGGACGGTC +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSELSRG*RAGGTV
Trigger: GACCGTCCCGCCAGCACGCCAGCCCCGACTCAGCTC...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACCCCGGGCCTGCAGCTTaGGCCCCATTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHPGPAA*APFPGG
Trigger: GCCCCCAGGAAATGGGGCCCAAGCTGCAGGCCCGGG...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACGCGGCCTCCTTTGGGTaGGTGTGCTGGTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHAASFG*VCWSGA
Trigger: CGCCCCAGACCAGCACACGCACCCAAAGGAGGCCGC...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCCCATGCCACCAGCCTaGCAGGGTCCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIPMPPA*QGPWLV
Trigger: CACCAACCAGGGACCCTGCCAGGCTGGTGGCATGGG...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCAGGTCTGTCCGGCGGTaGCGGCCCCTACCACATCTC +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIRSVRR*RPLPHL
Trigger: GAGATGTGGTAGGGGCCGCCACCGCCGGACAGACCT...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTCGGTGGAGAGCTCGGTaGAGACCCCGGGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRARWRAR*RPRGLG
Trigger: CCCGAGCCCCCGGGGTCTCCACCGAGCTCTCCACCG...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCGCCTCCTTGGTCTCCTaGGGGCTTGGGTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIASLVS*GLGSAT
Trigger: TGTGGCAGACCCAAGCCCTCAGGAGACCAAGGAGGC...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCAGCCGGGCCCGGAGGTaGGCAAGTTTGCCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGISRARR*ASLPPF
Trigger: AAAAGGCGGCAAACTTGCTCACCTCCGGGCCCGGCT...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACCGCTGGGGACACACCTaGTGGAACTGCGCGCGGGAT +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHRWGHT*WNCARD
Trigger: ATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCG...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGGAGGAGGTCTGGGCCTaGGAGCCGGGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAEEVWA*EPGWGS
Trigger: AGAGCCCCAGCCCGGCTCCCAGGCCCAGACCTCCTC...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACAGCGTTGAAGAGCTTTaGGGTGCCCGCCCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHSVEEL*GARPGW
Trigger: CCACCCCGGGCGGGCACCCCAAAGCTCTTCAACGCT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTGGGCGCAGCGGGCGCTaGGGACACACCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAGRSGR*GHTCWN
Trigger: GTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCC...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTCCTCCGTGATGCTGTaGACAGGCTGCGGGATCACC +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSSSVML*TGCGIT
Trigger: GGTGATCCCGCAGCCTGTTCACAGCATCACGGAGGA...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCCACAGCTTCTGATCTaGAGTGCTCTGGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIPQLLI*SALGPG
Trigger: ACCCGGCCCCAGAGCACTTCAGATCAGAAGCTGTGG...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCCCATGTAGCACTGGCTaGGGCAAGGCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSPCSTG*GKAISS
Trigger: GCTGGAGATGGCCTTGCCGCAGCCAGTGCTACATGG...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTGCGGCCTCCTTTGGGTaGGTGTGCTGGTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAAASFG*VCWSGA
Trigger: CGCCCCAGACCAGCACACGCACCCAAAGGAGGCCGC...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACTATTTGTGCTGGCCGTaGAGGCCGCACGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHYLCWP*RPHGPG
Trigger: GCCAGGACCGTGCGGCCTCCACGGCCAGCACAAATA...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCACTCGTACCAGGTCTTaGCGCGGTTCTGCACGGACT +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGITRTRS*RGSART
Trigger: AGTCCGTGCAGAACCGCGTCAAGACCTGGTACGAGT...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACACCCTGTGTCCCCAGTaGTGCCATGCCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHTLCPQ*CHAPGS
Trigger: AGATCCTGGGGCATGGCAGCACTGGGGACACAGGGT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCTGCTGTCCATGCAGCTaGGGTAGTAGGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGICCPCS*GSRSVR
Trigger: CCGGACAGACCTACTACCGCAGCTGCATGGACAGCA...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACAGGTTGGTAAACCCGTaGGCCACCACGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHRLVNP*ATTLAV
Trigger: CACGGCCAACGTGGTGGCGCACGGGTTTACCAACCT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTCCACCAACTCTTGCTaGTTTGCAGCCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSSTNSC*FAAASS
Trigger: GCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGA...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGCCGGGCCCGGGCTCATaGAGATCCTCACCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAPGPGS*RSSPSA
Trigger: AGCACTCGGTGAGGATCTGCATGAGCCCGGGCCCGG...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTCACACCTGCTGGAACTaGGCGCGGGATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAHTCWN*ARDPPH
Trigger: GTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTG...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTTCCTCCTGCATCTTaGTCTTCCGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGILPPAS*SSEGSL
Trigger: CAGGGACCCCTCGGAAGACCAAGATGCAGGAGGAAG...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCATCAGCAGCCAGTGGTaGATGTTGTCCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSISSQW*MLSGVW
Trigger: CCAGACCCCGGACAACATCCACCACTGGCTGCTGAT...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCATCAGCAGCCAGTGGTaGATGTTGTCCGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIISSQW*MLSGVW
Trigger: CCAGACCCCGGACAACATCCACCACTGGCTGCTGAT...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTCCATCAGCAGCCAGTaGTGGATGTTGTCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSSISSQ*WMLSGV
Trigger: GACCCCGGACAACATCCACCACTGGCTGCTGATGGA...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCCGTAAACCCAGTGAGTaGAGCCGAGGCCCTGATAGG +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSRKPSE*SRGPDR
Trigger: CCTATCAGGGCCTCGGCTCCACTCACTGGGTTTACG...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTGGTGCCCGCCCGGGGTaGAAGGATCAGCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAGARPG*KDQHAL
Trigger: AAGAGCGTGCTGATCCTTCCACCCCGGGCGGGCACC...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGGGTGGCGGCCTCCTTTaGGTGCGTGTGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAGGGLL*VRVLVW
Trigger: CCAGACCAGCACACGCACCCAAAGGAGGCCGCCACC...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCCCAGCCCAACATCCTaGTGCCTGCTTAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIPSPTS*CLLRCQ
Trigger: TTGGCATCTAAGCAGGCATCAGGATGTTGGGCTGGG...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGAGGGGTCCCTGGGGGCTaGGGCAGCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: ADGARYHTGGCARVLSKRGVPGG*GSTLWT
Trigger: GGTCCAGAGGGTGCTGCCTCAGCCCCCAGGGACCCC...TCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACTCTCTACGCCCTTCATaGGCCAGGTCAGTACCCTGC +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHSLRPS*ARSVPC
Trigger: GCAGGGTACTGACCTGGCTCATGAAGGGCGTAGAGA...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCCTGCACCATCAGCTCTaGCTCATCCAGCATGCCTTG +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSLHHQL*LIQHAL
Trigger: CAAGGCATGCTGGATGAGTCAGAGCTGATGGTGCAG...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTGGCCCACGCCCACCTaGGACACCACACAGCTATCC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAWPTPT*DTTQLS
Trigger: GGATAGCTGTGTGGTGTCGCAGGTGGGCGTGGGCCA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACTGCTGTCCATGCAGCTaGGGTAGTAGGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHCCPCS*GSRSVR
Trigger: CCGGACAGACCTACTACCGCAGCTGCATGGACAGCA...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCAGCATGCCTTGCGAGTaGCAGGTGTACTCGTACCAG +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSSMPCE*QVYSYQ
Trigger: CTGGTACGAGTACACCTGGCACTCGCAAGGCATGCT...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGCAACTCTTGCTGCTTTaGAGCCGCCTCCAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAQLLLL*SRLQRG
Trigger: GCCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTG...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGCCTTGGGTTCCTCCTTaGGCTGCAGGGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAPWVPP*AAGGWV
Trigger: CACCCATCCCCCTGCAGCCCAAGGAGGAACCCAAGG...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCTCCGGGACAGCTCTCTaGGCATCTTCTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGISGTAL*ASSPQL
Trigger: AAGCTGTGGAGAAGATGCCCAGAGAGCTGTCCCGGA...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTCCGTCTTCTTCACTCTaGCCCACGCCCACCTGCGAC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAPSSSL*PTPTCD
Trigger: GTCGCAGGTGGGCGTGGGCCAGAGTGAAGAAGACGG...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTGTCTCCGCCCAGTCCTaGGGCTCCTTTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAVSAQS*GSFSAS
Trigger: GGAGGCTGAAAAGGAGCCCCAGGACTGGGCGGAGAC...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACAGCGGGCTTTGTGTCTaGAGCTGGCTCTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHSGLCV*SWLWGF
Trigger: AAAGCCCCAGAGCCAGCTCCAGACACAAAGCCCGCT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCAACTGCAGGCGTGTCTaGAACACGGTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGINCRRV*NTVMSR
Trigger: CCTGGACATCACCGTGTTCCAGACACGCCTGCAGTT...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTCTTCTCTTGAGCCGTaGGGGAAGGTGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRASSLEP*GKVGRW
Trigger: CCAGCGCCCCACCTTCCCCCACGGCTCAAGAGAAGA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACTCCAGGGGCGGTGTTTaGACTTGCAGCAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHSRGGV*TCSRAC
Trigger: ACATGCTCTGCTGCAAGTTCAAACACCGCCCCTGGA...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CCACGCCCGGCTATGGGCCTTTTCCACAGCCCTCTGGGGGTAAGTCCTGCTGTCGGGGTCTCCCGGGCCTaGAGCTTGGGCCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: PRPAMGLFHSPLGVSPAVGVSRA*SLGPIS
Trigger: GGAAATGGGGCCCAAGCTGCAGGCCCGGGAGACCCC...GACAGCAGGACTTACCCCCAGAGGGCTGTGGAAAAGGCCCATAGCCGGGCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGGGGCTCTGGAGCTGGTaGCTCCTTGGGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAGLWSW*LLGFLL
Trigger: AAGGAGGAACCCAAGGAGGCACCAGCTCCAGAGCCC...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTCATGTACTTCACCGTaGTGTCCATGCAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSSCTSP*CPCSCG
Trigger: ACCGCAGCTGCATGGACAGCACGGTGAAGTACATGA...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACGTCTTGACGCGGTTCTaGACGGACTTGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHVLTRF*TDLGIL
Trigger: CAAGATCCCCAAGTCCGTGCAGAACCGCGTCAAGAC...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCCGATCTCCCCCTTCTTaGACACATAGTCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSRSPPS*THSRWA
Trigger: TGCCCAACGACTATGTGTGCAAGAAGGGGGAGATCG...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTATGTTGCCCAGTCTaGTCTCCAACTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGILCCPV*SPTLGL
Trigger: GAGGCCAAGAGTTGGAGAGCAGACTGGGCAACATAG...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTGTCCTTCGGGGTGGTaGGGTCAGACCAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRACPSGW*GQTRQP
Trigger: TGGTTGCCTGGTCTGACCCCACCACCCCGAAGGACA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTCAGTGTCCTTCGGGGTaGTGGGGTCAGACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAQCPSG*WGQTRQ
Trigger: TTGCCTGGTCTGACCCCACCACCCCGAAGGACACTG...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGGGGACTCTGCTGGTaGCAACGCCTTGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAWGLCW*QRLELF
Trigger: GAAGAGCTCAAGGCGTTGTCACCAGCAGAGTCCCCA...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTGGGGACTCTGCTGGTaGCAACGCCTTGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAWGLCW*QRLELF
Trigger: GAAGAGCTCAAGGCGTTGTCACCAGCAGAGTCCCCA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTCCGCCTCTGACAAACTaGAGGCGTGTCTGGAACACG +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAPPLTN*RRVWNT
Trigger: CGTGTTCCAGACACGCCTGCAGTTTGTCAGAGGCGG...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACAAGTTTGCCGCCTTTTaGCCCCTTGCCACCCATCTT +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHKFAAF*PLATHL
Trigger: AAGATGGGTGGCAAGGGGGCAAAAGGCGGCAAACTT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGGGAGGTGAGCAAGTTTaGCGCCTTTTGCCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAGGEQV*RLLPPC
Trigger: GCAAGGGGGCAAAAGGCGGCAAACTTGCTCACCTCC...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCTGCACACATAGTCGTTaGGCAGGTAGACAACAGAGC +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGICTHSR*AGRQQS
Trigger: GCTCTGTTGTCTACCTGCCCAACGACTATGTGTGCA...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTTCTCAGCATGCGCCTaGCTTTCTTCCGGAGTAACT +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSFSACA*LSSGVT
Trigger: AGTTACTCCGGAAGAAAGCCAGGCGCATGCTGAGAA...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCGAGCCGGGTCCTCCGTaGTGCTGTGAACAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: DGARYHTGGCARVLSKRCEPGPP*CCEQAA
Trigger: CGCAGCCTGTTCACAGCATCACGGAGGACCCGGCTC...GCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp GTTTCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGGCGCGGCCAGTTCTTTaGGCCGGGCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VSQDDRQRMLLPGCSSWQARPVL*AGPGGE
Trigger: CTCACCTCCGGGCCCGGCTCAAAGAACTGGCCGCGC...CTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGGGGGTCTCCCGGGCCTaGAGCTTGGGCCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRGVSRA*SLGPIS
Trigger: GGAAATGGGGCCCAAGCTGCAGGCCCGGGAGACCCC...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CCACGCCCGGCTATGGGCCTTTTCCACAGCCCTCTGGGGGTAAGTCCTGCTGTCGCCATCTCCAGCCTGTaGAGGACCCATGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PRPAMGLFHSPLGVSPAVAISSL*RTHATS
Trigger: GCTGGTGGCATGGGTCCTGCACAGGCTGGAGATGGC...GACAGCAGGACTTACCCCCAGAGGGCTGTGGAAAAGGCCCATAGCCGGGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTACCTGCACTTCTGGGTaGTGTTTCGTGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRATCTSG*CFVAGT
Trigger: AGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGT...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTCACCGTGCTGTCCATaGAGCTGCGGTAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLASPCCP*SCGSRS
Trigger: AGACCTACTACCGCAGCTGCATGGACAGCACGGTGA...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTGTCTTGACGCGGTTCTaGACGGACTTGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAVLTRF*TDLGIL
Trigger: CAAGATCCCCAAGTCCGTGCAGAACCGCGTCAAGAC...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTAGGCGCTGTAGCAACTaGAGGCTCATCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRARRCSN*RLISPD
Trigger: GTCTGGAGAGATGAGCCTGCAGTTGCTACAGCGCCT...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564448.5
CDS-3UTR CCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGCCTCAAGGGCCTCATTaGGTTCATCTGTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAPQGPH*VHLCTL
Trigger: CAGGGTGCACAGATGAACCCAATGAGGCCCTTGAGG...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTGTAGTTCACGTCGATaGCGAGGTCCAGCCGCATCT +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRACSSRR*RGPAAS
Trigger: AGATGCGGCTGGACCTCGCCATCGACGTGAACTACA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGCGTGCGCCACCACGTTaGCCGTGCGCCGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGRAPPR*PCAGSR
Trigger: GCGGGAACCGGCGCACGGCCAACGTGGTGGCGCACG...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCCGGTGGAGAGCTCGGTaGAGACCCCGGGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLRWRAR*RPRGLG
Trigger: CCCGAGCCCCCGGGGTCTCCACCGAGCTCTCCACCG...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACAAGCAAAGACGCCCGTaGAATAATTCAGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHKQRRP*NNSAAG
Trigger: TCCAGCTGCTGAATTATTTCACGGGCGTCTTTGCTT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGGTCAGCGGGTCAATaGTCTGGGGAAACTGGTACT +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLAWSAGQ*SGETGT
Trigger: AGTACCAGTTTCCCCAGAGCATTGACCCGCTGACCA...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGCCACCACGTTGGCCGTaGGCCGGTTCCCGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGPPRWP*AGSRPQ
Trigger: TTGGGGGCGGGAACCGGCGCACGGCCAACGTGGTGG...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTCTGGGGTTTGGAAATaGTTAGACCAGCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRASGVWK*LDQPGD
Trigger: GTCCCCAGGCTGGTCTAAGCATTTCCAAACCCCAGA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGGGGGCCTTCCGAGGGGTCCCTaGGGGCTGAGGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: GKTVSCRGADGARYHTGGLPRGP*GLRQHP
Trigger: AGGGTGCTGCCTCAGCCCCCAGGGACCCCTCGGAAG...GCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTCAGTACCCTGCGGCTaGGACTATTCATTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSSVPCG*DYSFQK
Trigger: TTTCTGAAATGAATAGTCCCAGCCGCAGGGTACTGA...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCATTGGGCCCCATTTCCTaGGGGCGTCCTGGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: TVSCRGADGARYHTGGCALGPIS*GRPGGA
Trigger: AGCGCCTCCAGGACGCCCCCAGGAAATGGGGCCCAA...TGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGCCCGGGCCTGCAGCTTaGGCCCCATTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGPGPAA*APFPGG
Trigger: GCCCCCAGGAAATGGGGCCCAAGCTGCAGGCCCGGG...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATCCCGGGCCTGCAGCTTaGGCCCCATTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNPGPAA*APFPGG
Trigger: GCCCCCAGGAAATGGGGCCCAAGCTGCAGGCCCGGG...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGCCTTGGGTTCCTCCTTaGGCTGCAGGGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWPWVPP*AAGGWV
Trigger: CACCCATCCCCCTGCAGCCCAAGGAGGAACCCAAGG...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGACTGGGGCTCTGGAGCTaGTGCCTCCTTGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ADGARYHTGGCARVLSKRLGLWS*CLLGFL
Trigger: GAGGAACCCAAGGAGGCACCAGCTCCAGAGCCCCAG...TCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp CACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTCCTCCGAGGAGGTCTGGGCCTaGGAGCCGGGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HWGLCTRPLKEMLNTESSEEVWA*EPGWGS
Trigger: AGAGCCCCAGCCCGGCTCCCAGGCCCAGACCTCCTC...GGAGGACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCGGTTCTGCACGGACTTaGGGATCTTGTAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIGSART*GSCRNS
Trigger: TGAATTTCTACAAGATCCCCAAGTCCGTGCAGAACC...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCACTTGCCCTGCCTaGATGATGTACATCTCACGG +
Preference number: 4 (lower is better)
Translates to: CNLSSSGPAPRGAESGLACTCPA*MMYISR
Trigger: CCGTGAGATGTACATCATCCAGGCAGGGCAAGTGCA...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTCGGGGCTGGCGTGCTaGCGGGACGGTCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLSGLAC*RDGQSC
Trigger: GCAGCTCTGACCGTCCCGCCAGCACGCCAGCCCCGA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCGAGCTGAGTCGGGGCTaGCGTGCTGGCGGGACGGTC +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLELSRG*RAGGTV
Trigger: GACCGTCCCGCCAGCACGCCAGCCCCGACTCAGCTC...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGTGGAGGCGCTGGGTCTaGGGCAGCACCTGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRWRRWV*GSTCSN
Trigger: GTTGCTACAGGTGCTGCCTCAGACCCAGCGCCTCCA...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCGGGCTCTGGAGCTGGTaGCTCCTTGGGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DGARYHTGGCARVLSKRCGLWSW*LLGFLL
Trigger: AAGGAGGAACCCAAGGAGGCACCAGCTCCAGAGCCC...GCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp CGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGCCAGTAAGTTGGCCCACGCCCACCTaGGACACCACACAGCTATCC +
Preference number: 4 (lower is better)
Translates to: RAVPPGRGRNASSSWPVSWPTPT*DTTQLS
Trigger: GGATAGCTGTGTGGTGTCGCAGGTGGGCGTGGGCCA...ACTTACTGGCCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTGCTTTTGTTTCTGCTaGTGTTTTGTAGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: AGAQRALGTHLLELRAGSCFCFC*CFVEMG
Trigger: CCCCATCTCTACAAAACAGCAGCAGAAACAAAAGCA...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGACCACACTGGGGGCTGTaGACGCGTCCTCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: VLTVPGTTLGAVHASSQRPHWGL*TRPLKE
Trigger: CTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGG...TCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TGTGTGGAGAGGGAGGGGTTCGCTGTTCAAATAGGGTGGGGTGTCAGTGGCCACCCCATGCCACCAGCCTaGCAGGGTCCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CVEREGFAVQIGWGVSGHPMPPA*QGPWLV
Trigger: CACCAACCAGGGACCCTGCCAGGCTGGTGGCATGGG...GTGGCCACTGACACCCCACCCTATTTGAACAGCGAACCCCTCCCTCTCCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGACAGGCTGCCCATGGCTaGCCTTCCCCTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ADGARYHTGGCARVLSKRQAAHG*PSPCSG
Trigger: ACCAGAACAAGGGGAAGGCCAGCCATGGGCAGCCTG...TCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp CCACGCCCGGCTATGGGCCTTTTCCACAGCCCTCTGGGGGTAAGTCCTGCTGTCTGGAAGGAGAGAGTGTaGCCAGGCCTAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: PRPAMGLFHSPLGVSPAVWKERV*PGLGRT
Trigger: GGTTCTCCCTAGGCCTGGCCACACTCTCTCCTTCCA...GACAGCAGGACTTACCCCCAGAGGGCTGTGGAAAAGGCCCATAGCCGGGCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp CTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGGTCCTCCGTGATGCTGTaGACAGGCTGCGGGATCACC +
Preference number: 4 (lower is better)
Translates to: LLIGVPKPWKERVWPGLGSSVML*TGCGIT
Trigger: GGTGATCCCGCAGCCTGTTCACAGCATCACGGAGGA...CCCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGGAGCCGGGTCCTCCGTaGTGCTGTGAACAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGEPGPP*CCEQAA
Trigger: CGCAGCCTGTTCACAGCATCACGGAGGACCCGGCTC...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCCTGTGGGCTGGTACTaGCATCCTGGTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRPVGWY*HPGGHP
Trigger: AGGATGCCCACCAGGATGTCAGTACCAGCCCACAGG...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACCCCTTCTATCTGTTCTaGGATAATGGCATTGCATTG +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHPFYLF*DNGIAL
Trigger: CAATGCAATGCCATTATCTCAGAACAGATAGAAGGG...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GCTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGACCCTGTGTCCCCAGTaGTGCCATGCCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: AAHWCPQALEGESVARPRTLCPQ*CHAPGS
Trigger: AGATCCTGGGGCATGGCAGCACTGGGGACACAGGGT...CCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATCCTGTGCAGGACCCATaGCACCAGCCTGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNPVQDP*HQPGRV
Trigger: GACCCTGCCAGGCTGGTGGCATGGGTCCTGCACAGG...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp CAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGGGAGGTGAGCAAGTTTaGCGCCTTTTGCCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: QDDRQRMLLPGCSSWQRQGGEQV*RLLPPC
Trigger: GCAAGGGGGCAAAAGGCGGCAAACTTGCTCACCTCC...CTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCCCGGGCCCGGGCTCATaGAGATCCTCACCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLPGPGS*RSSPSA
Trigger: AGCACTCGGTGAGGATCTGCATGAGCCCGGGCCCGG...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCCGCTGGGGACACACCTaGTGGAACTGCGCGCGGGAT +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLRWGHT*WNCARD
Trigger: ATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCG...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GTTTCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGTATTTGTGCTGGCCGTaGAGGCCGCACGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VSQDDRQRMLLPGCSSWQYLCWP*RPHGPG
Trigger: GCCAGGACCGTGCGGCCTCCACGGCCAGCACAAATA...CTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGAGCGTTGAAGAGCTTTaGGGTGCCCGCCCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGSVEEL*GARPGW
Trigger: CCACCCCGGGCGGGCACCCCAAAGCTCTTCAACGCT...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTTGGGTGCGTGTGCTaGTCTGGGGCGGCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLFGCVC*SGAAEP
Trigger: AGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGTGTGGAGAGGGAGGGGTTCGCTGTTCAAATAGGGTGGGGTGTCAGTGGCCACCTGCCTGGGAGTGTGTaGAGAGGGAGGGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: CVEREGFAVQIGWGVSGHLPGSV*RGRGSL
Trigger: CAGCGAACCCCTCCCTCTCCACACACTCCCAGGCAG...GTGGCCACTGACACCCCACCCTATTTGAACAGCGAACCCCTCCCTCTCCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GCTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGTCCCCTTGTCCTGCCTaGGAGTGTGTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AAHWCPQALEGESVARPRSPCPA*ECVERE
Trigger: CTCCCTCTCCACACACTCCCAGGCAGGACAAGGGGA...CCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp GCTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGTCTCTACGCCCTTCATaGGCCAGGTCAGTACCCTGC +
Preference number: 4 (lower is better)
Translates to: AAHWCPQALEGESVARPRSLRPS*ARSVPC
Trigger: GCAGGGTACTGACCTGGCTCATGAAGGGCGTAGAGA...CCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp CACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTCCTCCTGGAGGCGCTGGGTCTaGGGCAGCACCTGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: HWGLCTRPLKEMLNTESSWRRWV*GSTCSN
Trigger: GTTGCTACAGGTGCTGCCTCAGACCCAGCGCCTCCA...GGAGGACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGCAGAGCTGCAGCCACTaGGGTCACGACTACGGAAAA +
Preference number: 4 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWQSCSH*GHDYGK
Trigger: TTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTG...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGTGGGGTTTCTCAGGATaGCAGGCAGAGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWWGFSG*QAEDAP
Trigger: AGGAGCATCCTCTGCCTGTCATCCTGAGAAACCCCA...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp CCACGCCCGGCTATGGGCCTTTTCCACAGCCCTCTGGGGGTAAGTCCTGCTGTCAGAGATGCTCAATACTaGGTCCTCCATCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: PRPAMGLFHSPLGVSPAVRDAQY*VLHPWG
Trigger: GCCCCATGGATGGAGGACTCAGTATTGAGCATCTCT...GACAGCAGGACTTACCCCCAGAGGGCTGTGGAAAAGGCCCATAGCCGGGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp GGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGGGGGCCTGAGGGCTTGGGTCTaGCACAGCCACTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKTVSCRGADGARYHTGGLRAWV*HSHFLL
Trigger: GAGGAGGAAGTGGCTGTGGCAGACCCAAGCCCTCAG...GCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp GTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGACATTGGGTTCATCTGTaGACCCTGTGTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VLTVPGTTLGAVHASSQRHWVHL*TLCPQC
Trigger: GCACTGGGGACACAGGGTGCACAGATGAACCCAATG...TCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp CAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGGGGTGGATTCTCTTCTaGCATGAGGGGGCAGCTATC +
Preference number: 4 (lower is better)
Translates to: QDDRQRMLLPGCSSWQRQGWILF*HEGAAI
Trigger: GATAGCTGCCCCCTCATGGCAGAAGAGAATCCACCC...CTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGCCAGTAAGTCCGCCTCTGACAAACTaGAGGCGTGTCTGGAACACG +
Preference number: 4 (lower is better)
Translates to: RAVPPGRGRNASSSWPVSPPLTN*RRVWNT
Trigger: CGTGTTCCAGACACGCCTGCAGTTTGTCAGAGGCGG...ACTTACTGGCCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCTTCCGAGGGGTCCCTaGGGGCTGAGGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPLPRGP*GLRQHP
Trigger: AGGGTGCTGCCTCAGCCCCCAGGGACCCCTCGGAAG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGTGTGGAGAGGGAGGGGTTCGCTGTTCAAATAGGGTGGGGTGTCAGTGGCCACGAAATCTCAGCGCCCTaGGCCCGGAGGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: CVEREGFAVQIGWGVSGHEISAP*ARRDMV
Trigger: CACCATATCCCTCCGGGCCCAGGGCGCTGAGATTTC...GTGGCCACTGACACCCCACCCTATTTGAACAGCGAACCCCTCCCTCTCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATCCTTGGGTTCCTCCTTaGGCTGCAGGGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNPWVPP*AAGGWV
Trigger: CACCCATCCCCCTGCAGCCCAAGGAGGAACCCAAGG...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGCTGGGGCTCTGGAGCTaGTGCCTCCTTGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGLGLWS*CLLGFL
Trigger: GAGGAACCCAAGGAGGCACCAGCTCCAGAGCCCCAG...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GTTTCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGGTACTGACATCCTGGTaGGCATCCTCCCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: VSQDDRQRMLLPGCSSWQVLTSW*ASSQGG
Trigger: ACCGCCCTGGGAGGATGCCCACCAGGATGTCAGTAC...CTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGCCGTCTTCTTCACTCTaGCCCACGCCCACCTGCGAC +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGPSSSL*PTPTCD
Trigger: GTCGCAGGTGGGCGTGGGCCAGAGTGAAGAAGACGG...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGTTCCACCTGCACTTCTaGGTGCTGTTTCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QDDRQRMLLPGCSSWQRQFHLHF*VLFRGR
Trigger: CCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAA...CTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGAAGGGAGGCAGGCGGTaGAGAGCTCGGTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQKGGRR*RARWRP
Trigger: GGGTCTCCACCGAGCTCTCCACCGCCTGCCTCCCTT...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTCTTCTCTTGAGCCGTaGGGGAAGGTGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLSSLEP*GKVGRW
Trigger: CCAGCGCCCCACCTTCCCCCACGGCTCAAGAGAAGA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCGGACTGATCCCTGCTaGCGAATGGGGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRRTDPC*RMGFLR
Trigger: CCTGAGAAACCCCATTCGCCAGCAGGGATCAGTCCG...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTATGGGCAGGACCTATTaGAATTCCAGGTCCTTTATG +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRAMGRTY*NSRSFM
Trigger: CATAAAGGACCTGGAATTCCAATAGGTCCTGCCCAT...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GAACCTCTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACAGGGTGGGGTGTCAGTaGCCACCTCCCCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EPLLGKTVSCRGADGARYRVGCQ*PPPPGR
Trigger: CCTTCCCGGGGGAGGTGGCCACTGACACCCCACCCT...GTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGCTGTTCAAATAGGGTaGGGTGTCAGTGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: VLTVPGTTLGAVHASSQRAVQIG*GVSGHL
Trigger: GAGGTGGCCACTGACACCCCACCCTATTTGAACAGC...TCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp CACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTCCTCCCCCCTTGTTCTGGTCTaGGAGGCTCTGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HWGLCTRPLKEMLNTESSPLVLV*EALGLV
Trigger: CACCAGCCCCAGAGCCTCCCAGACCAGAACAAGGGG...GGAGGACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATTGCCAGGTACCACACTaGGGGCTGTGCACGCGTCCT +
Preference number: 4 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNCQVPH*GLCTRP
Trigger: AGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCCCAGCCCAACATCCTaGTGCCTGCTTAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRPSPTS*CLLRCQ
Trigger: TTGGCATCTAAGCAGGCATCAGGATGTTGGGCTGGG...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp CTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGGCCCAGCCCAACATCCTaGTGCCTGCTTAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: LLIGVPKPWKERVWPGLGPSPTS*CLLRCQ
Trigger: TTGGCATCTAAGCAGGCATCAGGATGTTGGGCTGGG...CCCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGCCTGTGGGCTGGTACTaGCATCCTGGTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGPVGWY*HPGGHP
Trigger: AGGATGCCCACCAGGATGTCAGTACCAGCCCACAGG...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp CAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGTCTAGCCCCCTACTGTaGTTGCCCGCAAAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: QDDRQRMLLPGCSSWQRQSSPLL*LPAKEN
Trigger: GTTTTCCTTTGCGGGCAATCACAGTAGGGGGCTAGA...CTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAACTTCCTCTTCCTCCTaGATCTTGGTCTTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VLTVPGTTLGAVHASSQRTSSSS*ILVFRG
Trigger: CCCTCGGAAGACCAAGATGCAGGAGGAAGAGGAAGT...TCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp CACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTCCTCCCCATGTAGCACTGGCTaGGGCAAGGCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HWGLCTRPLKEMLNTESSPCSTG*GKAISS
Trigger: GCTGGAGATGGCCTTGCCGCAGCCAGTGCTACATGG...GGAGGACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCGCTTCTGATCTGAAGTaGTCTGGGGCCGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLASDLK*SGAGSR
Trigger: ACGGGACCCGGCCCCAGAGCACTTCAGATCAGAAGC...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGACCTGCACTTCTGGGTaGTGTTTCGTGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRTCTSG*CFVAGT
Trigger: AGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGT...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGTCTCCCTTGACGTCTTaGGAGCTCTTGGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRSPLTS*ELLACS
Trigger: GGAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGA...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCTTCACCGACAGGATCTaGTCTCCCGGCTCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPFTDRI*SPGSGP
Trigger: GGGCCCGGAGCCGGGAGAGCAGATCCTGTCGGTGAA...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTCTTTATGTTCACTGTTaGAGGTGGAAACAAATGGCC +
Preference number: 4 (lower is better)
Translates to: TCRAQAQPREELSRGWRALYVHC*RWKQMA
Trigger: GGCCATTTGTTTCCACCTGCAACAGTGAACATAAAG...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACATACATACAGACATTTaGAAACCTTCAAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHIHTDI*KPSKAS
Trigger: AGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTAT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCCTCAAGGGCCTCATTaGGTTCATCTGTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRPQGPH*VHLCTL
Trigger: CAGGGTGCACAGATGAACCCAATGAGGCCCTTGAGG...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGTGGCGCTATTTGTGCTaGCCGTGGAGGCCGCACGGT +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQWRYLC*PWRPHG
Trigger: ACCGTGCGGCCTCCACGGCCAGCACAAATAGCGCCA...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGCCAGTAAGTATGCTCTGGGGAAACTaGTACTTCTTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RAVPPGRGRNASSSWPVSMLWGN*YFFQGR
Trigger: CCGCCCCTGGAAGAAGTACCAGTTTCCCCAGAGCAT...ACTTACTGGCCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGCGTCTTGCGAGCTCTTaGCCTGTTCCACCAACTCTT +
Preference number: 4 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWRLASS*PVPPTL
Trigger: AAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACG...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACGCAGGTGGAAACAAATaGCCTAATACTAGAATACTA +
Preference number: 4 (lower is better)
Translates to: RALGTHLLELRAGSASPHAGGNK*PNTRIL
Trigger: TAGTATTCTAGTATTAGGCCATTTGTTTCCACCTGC...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp TACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTGCCTCCTTGGTCTCCTaGGGGCTTGGGTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: YHTGGCARVLSKRCSILSASLVS*GLGSAT
Trigger: TGTGGCAGACCCAAGCCCTCAGGAGACCAAGGAGGC...ACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGTGGCGGCAACACGGTTaGGGGTGGATTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGWRQHG*GWILFC
Trigger: GCAGAAGAGAATCCACCCTCAACCGTGTTGCCGCCA...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCCTTGCCCTGCCTGGATaGTGTACATCTCACGGCCGA +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLLALPG*CTSHGR
Trigger: TCGGCCGTGAGATGTACATCATCCAGGCAGGGCAAG...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGAGCCTTCCTCTCCCTTaGCGTCTTGCGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGSLPLP*RLASSW
Trigger: CCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCT...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGAGGGACTCGAACACTTaGTGCAACTTGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWRDSNT*CNLSSS
Trigger: TGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCT...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGACCTTCAAAGGCCTCTaGGCAGCTCACATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWTFKGL*AAHIFL
Trigger: CAGGAAAATGTGAGCTGCTCAGAGGCCTTTGAAGGT...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGACTTCCTCTTCCTCCTaGATCTTGGTCTTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRTSSSS*ILVFRG
Trigger: CCCTCGGAAGACCAAGATGCAGGAGGAAGAGGAAGT...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GTGCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAACTCTTTCCAGATTCTaGTCCAGCCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLTVPGTTLGAVHASSQRTLSRF*SSHRSS
Trigger: GCTGCTTCTGTGGCTGGAGCAGAATCTGGAAAGAGT...TCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGTGTTGCTTCTCAGCATaGGCCTGGCTTTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRCCFSA*AWLSSG
Trigger: TCCGGAAGAAAGCCAGGCGCATGCTGAGAAGCAACA...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCAACTCTTGCTGCTTTaGAGCCGCCTCCAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPQLLLL*SRLQRG
Trigger: GCCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGAGTCGGGGCTGGCGTaGTGGCGGGACGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLESGLA*WRDGQS
Trigger: GCTCTGACCGTCCCGCCAGCACGCCAGCCCCGACTC...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GTTTCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGATGACAGGCAGAGGATaGTCCTACCGGGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VSQDDRQRMLLPGCSSWQMTGRG*SYRAVP
Trigger: AGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCAT...CTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp TGTGTGGAGAGGGAGGGGTTCGCTGTTCAAATAGGGTGGGGTGTCAGTGGCCACAGGGTCTCACTGTGTTaGCCACGGTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: CVEREGFAVQIGWGVSGHRVSLC*PRWSRT
Trigger: AGTTCGAGACCACCGTGGGCAACACAGTGAGACCCT...GTGGCCACTGACACCCCACCCTATTTGAACAGCGAACCCCTCCCTCTCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGGGGGCCCTCAAGGGCCTCATTaGGTTCATCTGTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: GKTVSCRGADGARYHTGGPQGPH*VHLCTL
Trigger: CAGGGTGCACAGATGAACCCAATGAGGCCCTTGAGG...GCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGGAGCTGGTGCCTCCTTaGGTTCCTCCTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQELVPP*VPPWAA
Trigger: TGCAGCCCAAGGAGGAACCCAAGGAGGCACCAGCTC...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGCCCATGCCACCAGCCTaGCAGGGTCCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWPMPPA*QGPWLV
Trigger: CACCAACCAGGGACCCTGCCAGGCTGGTGGCATGGG...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGAAGGGAGGCAGGCGGTaGAGAGCTCGGTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWKGGRR*RARWRP
Trigger: GGGTCTCCACCGAGCTCTCCACCGCCTGCCTCCCTT...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GCTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGCAGCTCCCATCACCCTaGTCTGCACATCACATATCC +
Preference number: 4 (lower is better)
Translates to: AAHWCPQALEGESVARPRQLPSP*SAHHIS
Trigger: GGATATGTGATGTGCAGACCAGGGTGATGGGAGCTG...CCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GAACCTCTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACGCCTTCCCCTTGTTCTaGTCTGGGAGGCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EPLLGKTVSCRGADGARYAFPLF*SGRLWG
Trigger: GCCCCAGAGCCTCCCAGACCAGAACAAGGGGAAGGC...GTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GAACCTCTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACCACGCCCGGCTATaGGCCTTTTCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EPLLGKTVSCRGADGARYHHARL*AFSTAL
Trigger: GAGGGCTGTGGAAAAGGCCCATAGCCGGGCGTGGTG...GTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACGGGGTCCCTGGGGGCTaGGGCAGCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNGVPGG*GSTLWT
Trigger: GGTCCAGAGGGTGCTGCCTCAGCCCCCAGGGACCCC...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGTCTCTGTCCGCTCCTTaGAGAGCTTCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGSLSAP*RASPAP
Trigger: AGGAGCTGGTGAAGCTCTTCAAGGAGCGGACAGAGA...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGTCCAGGGGCGGTGTTTaGACTTGCAGCAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGSRGGV*TCSRAC
Trigger: ACATGCTCTGCTGCAAGTTCAAACACCGCCCCTGGA...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGAAGCAAAGACGCCCGTaGAATAATTCAGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWKQRRP*NNSAAG
Trigger: TCCAGCTGCTGAATTATTTCACGGGCGTCTTTGCTT...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGAAAAGCATCTTCTCTTaGGCCGTGGGGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGKSIFS*AVGEGG
Trigger: CCCACCTTCCCCCACGGCTCAAGAGAAGATGCTTTT...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GAACCTCTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACATCCTGTCGAGGTGCTaGCGGTGCCAGGTACCACAC +
Preference number: 4 (lower is better)
Translates to: EPLLGKTVSCRGADGARYILSRC*RCQVPH
Trigger: GTGTGGTACCTGGCACCGTCAGCACCTCGACAGGAT...GTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCTGAGGGCTTGGGTCTaGCACAGCCACTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPLRAWV*HSHFLL
Trigger: GAGGAGGAAGTGGCTGTGGCAGACCCAAGCCCTCAG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCCATGTAGCACTGGCTaGGGCAAGGCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPPCSTG*GKAISS
Trigger: GCTGGAGATGGCCTTGCCGCAGCCAGTGCTACATGG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGTGTTCCACCAACTCTTaGTGCTTTGCAGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGCSTNS*CFAAAS
Trigger: GGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACA...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGAGTCGGGGCTGGCGTaGTGGCGGGACGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEESGLA*WRDGQS
Trigger: GCTCTGACCGTCCCGCCAGCACGCCAGCCCCGACTC...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTCCTCCCCCATCACCCTGGTCTaGACATCACATATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HWGLCTRPLKEMLNTESSPITLV*TSHIPG
Trigger: CCCTGGGATATGTGATGTGCAGACCAGGGTGATGGG...GGAGGACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp TACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTTGGCTCCCCTTGTCCTaGCTGGGAGTGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: YHTGGCARVLSKRCSILSWLPLS*LGVCGE
Trigger: CTCTCCACACACTCCCAGGCAGGACAAGGGGAGCCA...ACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCGAAATCTCAGCGCCCTaGGCCCGGAGGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPEISAP*ARRDMV
Trigger: CACCATATCCCTCCGGGCCCAGGGCGCTGAGATTTC...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGAGCTGGTGCCTCCTTaGGTTCCTCCTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGKTVSCRGADGARYHTELVPP*VPPWAA
Trigger: TGCAGCCCAAGGAGGAACCCAAGGAGGCACCAGCTC...AGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGAGGAGGTCTGGGCCTaGGAGCCGGGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCREEVWA*EPGWGS
Trigger: AGAGCCCCAGCCCGGCTCCCAGGCCCAGACCTCCTC...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTCCACCTGCACTTCTaGGTGCTGTTTCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLFHLHF*VLFRGR
Trigger: CCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCATGCTCTGGGGAAACTaGTACTTCTTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLMLWGN*YFFQGR
Trigger: CCGCCCCTGGAAGAAGTACCAGTTTCCCCAGAGCAT...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACGCGCGGGTGGGTCGGTaGCGGCCTCCTTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNARVGR*RPPLGA
Trigger: CGCACCCAAAGGAGGCCGCCACCGACCCACCCGCGC...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GTTTCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGCTCCAGGAAGGATGCTaGTGGTCTGCACATCACATA +
Preference number: 4 (lower is better)
Translates to: VSQDDRQRMLLPGCSSWQLQEGC*WSAHHI
Trigger: TATGTGATGTGCAGACCATCAGCATCCTTCCTGGAG...CTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCACACGTAGGCTTTGCTaGGGATGGATTCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPTRRLC*GWIPGG
Trigger: GCCGCCTGGAATCCATCCTCAGCAAAGCCTACGTGT...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCTTGCCCTGCCTGGATaGTGTACATCTCACGGCCGA +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPLALPG*CTSHGR
Trigger: TCGGCCGTGAGATGTACATCATCCAGGCAGGGCAAG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACGCGCGGCCAGTTCTTTaGGCCGGGCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNARPVL*AGPGGE
Trigger: CTCACCTCCGGGCCCGGCTCAAAGAACTGGCCGCGC...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTGCCCAGGCTGGTCTTaGACTCCTGGTCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLCPGWS*TPGLKQ
Trigger: TTGTTTGAGACCAGGAGTTCAAGACCAGCCTGGGCA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTCCGCCAGCCAGGAATTaGCTTCTTGCTGCCACTCGT +
Preference number: 4 (lower is better)
Translates to: LLGKTVSCRGADGARYHTPPARN*LLAATR
Trigger: ACGAGTGGCAGCAAGAAGGCAATTCCTGGCTGGCGG...AGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATGCCAGGTCAGTACCCTaGGGCTGGGACTATTCATTT +
Preference number: 4 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNARSVP*GWDYSF
Trigger: AAATGAATAGTCCCAGCCGCAGGGTACTGACCTGGC...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATAGCACCTGTAGCAACTaGAGGCTCATCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNSTCSN*RLISPD
Trigger: GTCTGGAGAGATGAGCCTGCAGTTGCTACAGGTGCT...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR GCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGGGTCTCCCGGGCCTaGAGCTTGGGCCCCATTTCC +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRGVSRA*SLGPIS
Trigger: GGAAATGGGGCCCAAGCTGCAGGCCCGGGAGACCCC...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGCTGACTCATCCAGCATaGCTTGCGAGTGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQLTHPA*LASARC
Trigger: ACACCTGGCACTCGCAAGGCATGCTGGATGAGTCAG...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGCGATCTCCCCCTTCTTaGACACATAGTCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGRSPPS*THSRWA
Trigger: TGCCCAACGACTATGTGTGCAAGAAGGGGGAGATCG...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGGACCTGCACTTGCCCTaGCTGGATGATGTACATCTC +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGDLHLP*LDDVHL
Trigger: GAGATGTACATCATCCAGGCAGGGCAAGTGCAGGTC...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTGTTGCTTCTCAGCATaGGCCTGGCTTTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLCCFSA*AWLSSG
Trigger: TCCGGAAGAAAGCCAGGCGCATGCTGAGAAGCAACA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGTGTTCCACCAACTCTTaGTGCTTTGCAGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQCSTNS*CFAAAS
Trigger: GGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACA...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCGAGGTCTCGCTATGTTaGCCAGTCTGCTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLEVSLC*PVCSPT
Trigger: AGTTGGAGAGCAGACTGGGCAACATAGCGAGACCTC...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCTGTGTCCAGCTCACTaGAGCCAGAAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPLCPAH*SQKLLG
Trigger: GCCCAGGAGTTTCTGGCTGCAGTGAGCTGGACACAG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCGCCCCCTACTGTGATTaGCCGCAAAGGAAAACCGCG +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPAPYCD*PQRKTA
Trigger: CGCGGTTTTCCTTTGCGGGCAATCACAGTAGGGGGC...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GAACCTCTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCTAAATCTTGCAGGCTaGCCATGGCTGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EPLLGKTVSCRGADGARYLNLAG*PWLAFP
Trigger: GGGGAAGGCCAGCCATGGGCAGCCTGCAAGATTTAG...GTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTCTTCCTCCTGCATCTTaGTCTTCCGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YHTGGCARVLSKRCSILSLPPAS*SSEGSL
Trigger: CAGGGACCCCTCGGAAGACCAAGATGCAGGAGGAAG...ACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGCTGGTACTGACATCCTaGTGGGCATCCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWLVLTS*WASSQG
Trigger: GCCCTGGGAGGATGCCCACCAGGATGTCAGTACCAG...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGCACCTCTGTACCCTGTaGGCTGGTACTGACATCCTG +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQHLCTL*AGTDIL
Trigger: CAGGATGTCAGTACCAGCCCACAGGGTACAGAGGTG...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGAGCTTCACCAGCTCCTaGAGCCGGTCGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQSFTSS*SRSLMM
Trigger: CATCATCAACGACCGGCTCCAGGAGCTGGTGAAGCT...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTGGAAAGCTTTAGGGAATGTAAGTGCTGTCATCAGCTGGGAGATTTCATTTTCGCGCGGGTGGGTCGGTaGCGGCCTCCTTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: LESFRECKCCHQLGDFIFARVGR*RPPLGA
Trigger: CGCACCCAAAGGAGGCCGCCACCGACCCACCCGCGC...GAAAATGAAATCTCCCAGCTGATGACAGCACTTACATTCCCTAAAGCTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTTGGGGACACACCTGCTaGAACTGCGCGCGGGATCCG +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLWGHTC*NCARDP
Trigger: CGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCA...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCGGGCGCAGCGGGCGCTaGGGACACACCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSGRSGR*GHTCWN
Trigger: GTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCC...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
3UTR CAA 72 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTaGATGCAACTTGTCGAGCTCAGGCCCAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEH*MQLVELRPSPA
Trigger: CGCGGGGCTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGAGCCGGGTCCTCCGTaGTGCTGTGAACAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEEPGPP*CCEQAA
Trigger: CGCAGCCTGTTCACAGCATCACGGAGGACCCGGCTC...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGGACTATAAGGGTGTCTaGTTTGGCAGGAGACGGTGG +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQDYKGV*FGRRRW
Trigger: CCACCGTCTCCTGCCAAATCAGACACCCTTATAGTC...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGATGGCAATTCTCAGCTaGACAGCTCGGGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWMAILS*TARAAL
Trigger: GAGGGCAGCCCGAGCTGTTCAGCTGAGAATTGCCAT...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACCTGTGCAGGACCCATaGCACCAGCCTGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRPVQDP*HQPGRV
Trigger: GACCCTGCCAGGCTGGTGGCATGGGTCCTGCACAGG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCTCATCCAGCATGCCTTaGGAGTGCCAGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPSSSMP*ECQVYS
Trigger: CGAGTACACCTGGCACTCGCAAGGCATGCTGGATGA...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGATTGGGCCCCATTTCCTaGGGGCGTCCTGGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRLGPIS*GRPGGA
Trigger: AGCGCCTCCAGGACGCCCCCAGGAAATGGGGCCCAA...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTCTGGGGCTCTGGAGCTaGTGCCTCCTTGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLLGLWS*CLLGFL
Trigger: GAGGAACCCAAGGAGGCACCAGCTCCAGAGCCCCAG...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCTCCGGGACAGCTCTCTaGGCATCTTCTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPSGTAL*ASSPQL
Trigger: AAGCTGTGGAGAAGATGCCCAGAGAGCTGTCCCGGA...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACCTCAGGCTCCTCCTTaGTCTCCGCCCAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRPQAPP*SPPSPG
Trigger: CCCAGGACTGGGCGGAGACCAAGGAGGAGCCTGAGG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATCGTGCGCCACCACGTTaGCCGTGCGCCGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNRAPPR*PCAGSR
Trigger: GCGGGAACCGGCGCACGGCCAACGTGGTGGCGCACG...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGGTGCCCGCCCGGGGTaGAAGGATCAGCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEGARPG*KDQHAL
Trigger: AAGAGCGTGCTGATCCTTCCACCCCGGGCGGGCACC...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGGTGGCGGCCTCCTTTaGGTGCGTGTGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEGGGLL*VRVLVW
Trigger: CCAGACCAGCACACGCACCCAAAGGAGGCCGCCACC...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGATGGGGACACACCTGCTaGAACTGCGCGCGGGATCCG +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRWGHTC*NCARDP
Trigger: CGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCA...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGGAGGGAGAACCTCTTCTaGGAAAAACTGTATCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLIGVPKPWKERVWPGLGRENLF*EKLYPV
Trigger: GACAGGATACAGTTTTTCCCAGAAGAGGTTCTCCCT...CCCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp GGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGGGGGCTTTGTTGCTGCTCATTaGTGTCCCCAAGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GKTVSCRGADGARYHTGGFVAAH*CPQALE
Trigger: TTCCAAGGCTTGGGGACACCAATGAGCAGCAACAAA...GCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCCTCCTTGGTCTCCTaGGGGCTTGGGTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRASLVS*GLGSAT
Trigger: TGTGGCAGACCCAAGCCCTCAGGAGACCAAGGAGGC...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTGTCCAGGAAGTAGATaGGGTCGCATAGGTAATCCA +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLCPGSR*GRIGNP
Trigger: TGGATTACCTATGCGACCTCATCTACTTCCTGGACA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGCTGCACCATCAGCTCTaGCTCATCCAGCATGCCTTG +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWLHHQL*LIQHAL
Trigger: CAAGGCATGCTGGATGAGTCAGAGCTGATGGTGCAG...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGAGCCGGGCCCGGAGGTaGGCAAGTTTGCCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVESRARR*ASLPPF
Trigger: AAAAGGCGGCAAACTTGCTCACCTCCGGGCCCGGCT...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGAGGGACTCGAACACTTaGTGCAACTTGTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQRDSNT*CNLSSS
Trigger: TGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCT...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGACTCTTTCCAGATTCTaGTCCAGCCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQTLSRF*SSHRSS
Trigger: GCTGCTTCTGTGGCTGGAGCAGAATCTGGAAAGAGT...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGCACCTGTAGCAACTaGAGGCTCATCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPSTCSN*RLISPD
Trigger: GTCTGGAGAGATGAGCCTGCAGTTGCTACAGGTGCT...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACAGGGCCGCCCAAGACCTaGACTTGCCCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GQIHTDICKPSKASEQLTGPPKT*TCPAWM
Trigger: CATCCAGGCAGGGCAAGTGCAGGTCTTGGGCGGCCC...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACGGGCCGCCCAAGACCTaGACTTGCCCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNGPPKT*TCPAWM
Trigger: CATCCAGGCAGGGCAAGTGCAGGTCTTGGGCGGCCC...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTAGGTTGGTAAACCCGTaGGCCACCACGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLRLVNP*ATTLAV
Trigger: CACGGCCAACGTGGTGGCGCACGGGTTTACCAACCT...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACACAGATCCTCACCGAGTaGTCTTCGGGCTCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GQIHTDICKPSKASEQLTQILTE*SSGSAG
Trigger: GCCGGCCGAGCCCGAAGAGCACTCGGTGAGGATCTG...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCACACCTGCTGGAACTaGGCGCGGGATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNHTCWN*ARDPPH
Trigger: GTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCTGACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGAAATGAAAACATTTGTTaGTGCTCATTGGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ADGARYHTGGCARVLSKRNENIC*CSLVSP
Trigger: TGGGGACACCAATGAGCAGCAACAAATGTTTTCATT...TCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGAGCTGGTGCCTCCTTaGGTTCCTCCTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLELVPP*VPPWAA
Trigger: TGCAGCCCAAGGAGGAACCCAAGGAGGCACCAGCTC...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACAGGCACTCCTGAACTaGCAGCCTCGGCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRQALLN*QPRPQP
Trigger: AGGCTGAGGCCGAGGCTGCCAGTTCAGGAGTGCCTG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGTGGCGCTATTTGTGCTaGCCGTGGAGGCCGCACGGT +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEWRYLC*PWRPHG
Trigger: ACCGTGCGGCCTCCACGGCCAGCACAAATAGCGCCA...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGAGCTTCACCAGCTCCTaGAGCCGGTCGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWSFTSS*SRSLMM
Trigger: CATCATCAACGACCGGCTCCAGGAGCTGGTGAAGCT...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGTCTGGAGCTGGCTCTaGGGCTTTCTTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLVWSWL*GFLGWG
Trigger: TCCCCAGCCAAGAAAGCCCCAGAGCCAGCTCCAGAC...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGCTTTGTGTCTGGAGCTaGCTCTGGGGCTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWLCVWS*LWGFLG
Trigger: GCCAAGAAAGCCCCAGAGCCAGCTCCAGACACAAAG...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGTGCACACATAGTCGTTaGGCAGGTAGACAACAGAGC +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQCTHSR*AGRQQS
Trigger: GCTCTGTTGTCTACCTGCCCAACGACTATGTGTGCA...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATTCGGGGCTGGCGTGCTaGCGGGACGGTCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNSGLAC*RDGQSC
Trigger: GCAGCTCTGACCGTCCCGCCAGCACGCCAGCCCCGA...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGCAACATGACACGATCTaGAAAGCTTTAGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWQHDTI*KALGNV
Trigger: TACATTCCCTAAAGCTTTCCAGATCGTGTCATGTTG...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTCTGACTCTGGGGTTTaGAAATGCTTAGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLSDSGV*KCLDQP
Trigger: AGGCTGGTCTAAGCATTTCCAAACCCCAGAGTCAGA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTCCGCCAGCCAGGAATTaGCTTCTTGCTGCCACTCGT +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLPPARN*LLAATR
Trigger: ACGAGTGGCAGCAAGAAGGCAATTCCTGGCTGGCGG...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGACAGCCCTGAAAGAGTaGGACTTTGCTAACGATGTT +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGTALKE*DFANDV
Trigger: AACATCGTTAGCAAAGTCGCACTCTTTCAGGGCTGT...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTCCACCACGTTGGCCGTaGGCCGGTTCCCGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFPPRWP*AGSRPQ
Trigger: TTGGGGGCGGGAACCGGCGCACGGCCAACGTGGTGG...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATGAAAACATTTGTTGCTaGTCATTGGTGTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNENICC*SLVSPS
Trigger: GCTTGGGGACACCAATGAGCAGCAACAAATGTTTTC...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGAAATCTCAGCGCCCTaGGCCCGGAGGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEEISAP*ARRDMV
Trigger: CACCATATCCCTCCGGGCCCAGGGCGCTGAGATTTC...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATTCAGTACCCTGCGGCTaGGACTATTCATTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: CQVPHWGLCTRPLKEMLNSVPCG*DYSFQK
Trigger: TTTCTGAAATGAATAGTCCCAGCCGCAGGGTACTGA...ATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGTACTGACATCCTGGTaGGCATCCTCCCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRVLTSW*ASSQGG
Trigger: ACCGCCCTGGGAGGATGCCCACCAGGATGTCAGTAC...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACTGGTACTGACATCCTaGTGGGCATCCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRLVLTS*WASSQG
Trigger: GCCCTGGGAGGATGCCCACCAGGATGTCAGTACCAG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGCTCTTCTTCATAAGCTaGAACCACCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: SESSGTRTLDATCRAQAQLFFIS*NHLCTL
Trigger: CAGGGTACAGAGGTGGTTCCAGCTTATGAAGAAGAG...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACAGTCTCCGCCCAGTCCTaGGGCTCCTTTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GQIHTDICKPSKASEQLTVSAQS*GSFSAS
Trigger: GGAGGCTGAAAAGGAGCCCCAGGACTGGGCGGAGAC...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGATGTCCTTCGGGGTGGTaGGGTCAGACCAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRCPSGW*GQTRQP
Trigger: TGGTTGCCTGGTCTGACCCCACCACCCCGAAGGACA...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGAACGCTAGCAGCTCCTaGCCAGTAAGTCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWNASSS*PVSPFP
Trigger: GGGAAATGGACTTACTGGCCAGGAGCTGCTAGCGTT...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGTCTCTACGCCCTTCATaGGCCAGGTCAGTACCCTGC +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVESLRPS*ARSVPC
Trigger: GCAGGGTACTGACCTGGCTCATGAAGGGCGTAGAGA...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACTCCTCCGTGATGCTGTaGACAGGCTGCGGGATCACC +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNSSVML*TGCGIT
Trigger: GGTGATCCCGCAGCCTGTTCACAGCATCACGGAGGA...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGTGGCGGCAACACGGTTaGGGGTGGATTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEWRQHG*GWILFC
Trigger: GCAGAAGAGAATCCACCCTCAACCGTGTTGCCGCCA...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACCGCCAGCCAGGAATTaGCTTCTTGCTGCCACTCGT +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRPPARN*LLAATR
Trigger: ACGAGTGGCAGCAAGAAGGCAATTCCTGGCTGGCGG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCACCCTGTGTCCCCAGTaGTGCCATGCCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSTLCPQ*CHAPGS
Trigger: AGATCCTGGGGCATGGCAGCACTGGGGACACAGGGT...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTCATTGGGTTCATCTGTaGACCCTGTGTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLHWVHL*TLCPQC
Trigger: GCACTGGGGACACAGGGTGCACAGATGAACCCAATG...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGGCCCTGATAGGCCGATaGCCAGTAATAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: STARVSKVSNGLIPAGEWALIGR*PVIKTG
Trigger: TCCTGTCTTTATTACTGGGCATCGGCCTATCAGGGC...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTAGCATGCCTTGCGAGTaGCAGGTGTACTCGTACCAG +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLSMPCE*QVYSYQ
Trigger: CTGGTACGAGTACACCTGGCACTCGCAAGGCATGCT...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTCTGACTCATCCAGCATaGCTTGCGAGTGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLLTHPA*LASARC
Trigger: ACACCTGGCACTCGCAAGGCATGCTGGATGAGTCAG...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTTCTCCCTTGACGTCTTaGGAGCTCTTGGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLSPLTS*ELLACS
Trigger: GGAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGA...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACTCCTTTGGGTGCGTGTaGTGGTCTGGGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYSFGCV*WSGAAE
Trigger: CTCCGCCGCCCCAGACCAGCACACGCACCCAAAGGA...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATCAGATCCTCACCGAGTaGTCTTCGGGCTCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNQILTE*SSGSAG
Trigger: GCCGGCCGAGCCCGAAGAGCACTCGGTGAGGATCTG...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACTTCACCGACAGGATCTaGTCTCCCGGCTCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYFTDRI*SPGSGP
Trigger: GGGCCCGGAGCCGGGAGAGCAGATCCTGTCGGTGAA...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATCCTCAGGCTCCTCCTTaGTCTCCGCCCAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNPQAPP*SPPSPG
Trigger: CCCAGGACTGGGCGGAGACCAAGGAGGAGCCTGAGG...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCAGTGTCCTTCGGGGTaGTGGGGTCAGACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNQCPSG*WGQTRQ
Trigger: TTGCCTGGTCTGACCCCACCACCCCGAAGGACACTG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTCTTTGTGTCTGGAGCTaGCTCTGGGGCTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLLCVWS*LWGFLG
Trigger: GCCAAGAAAGCCCCAGAGCCAGCTCCAGACACAAAG...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGTCCATCAGCAGCCAGTaGTGGATGTTGTCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVESISSQ*WMLSGV
Trigger: GACCCCGGACAACATCCACCACTGGCTGCTGATGGA...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAGGTCTGTCCGGCGGTaGCGGCCCCTACCACATCTC +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNRSVRR*RPLPHL
Trigger: GAGATGTGGTAGGGGCCGCCACCGCCGGACAGACCT...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTCAGCCGCATCTTGTCTaGAAGCTGCACCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLQPHLV*KLHHQL
Trigger: GAGCTGATGGTGCAGCTTCCAGACAAGATGCGGCTG...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATTTTGGGTGCGTGTGCTaGTCTGGGGCGGCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNFGCVC*SGAAEP
Trigger: AGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAA...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCAGCCAGAAACTCCTaGGCTCAAGCCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRAARNS*AQAILL
Trigger: CAGGAGGATGGCTTGAGCCCAGGAGTTTCTGGCTGC...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCAGTGCTGTCATCAGCTaGGAGATTTCATTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLSAVIS*EISFSR
Trigger: CCTAGAAAATGAAATCTCCCAGCTGATGACAGCACT...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp CTGGAAAGCTTTAGGGAATGTAAGTGCTGTCATCAGCTGGGAGATTTCATTTTCCCACAGCTTCTGATCTaGAGTGCTCTGGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LESFRECKCCHQLGDFIFPQLLI*SALGPG
Trigger: ACCCGGCCCCAGAGCACTTCAGATCAGAAGCTGTGG...GAAAATGAAATCTCCCAGCTGATGACAGCACTTACATTCCCTAAAGCTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACACACGTAGGCTTTGCTaGGGATGGATTCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNTRRLC*GWIPGG
Trigger: GCCGCCTGGAATCCATCCTCAGCAAAGCCTACGTGT...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGAAAAGCATCTTCTCTTaGGCCGTGGGGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEKSIFS*AVGEGG
Trigger: CCCACCTTCCCCCACGGCTCAAGAGAAGATGCTTTT...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACATTGGGTTCATCTGTaGACCCTGTGTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRHWVHL*TLCPQC
Trigger: GCACTGGGGACACAGGGTGCACAGATGAACCCAATG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACGCCATCTCCAGCCTGTaGAGGACCCATGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYAISSL*RTHATS
Trigger: GCTGGTGGCATGGGTCCTGCACAGGCTGGAGATGGC...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATGCCATCTCCAGCCTGTaGAGGACCCATGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNAISSL*RTHATS
Trigger: GCTGGTGGCATGGGTCCTGCACAGGCTGGAGATGGC...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGGGTGGATTCTCTTCTaGCATGAGGGGGCAGCTATC +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEGWILF*HEGAAI
Trigger: GATAGCTGCCCCCTCATGGCAGAAGAGAATCCACCC...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGACCTGCACTTGCCCTaGCTGGATGATGTACATCTC +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLDLHLP*LDDVHL
Trigger: GAGATGTACATCATCCAGGCAGGGCAAGTGCAGGTC...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTTCCTTTGGGTGCGTGTaGTGGTCTGGGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFSFGCV*WSGAAE
Trigger: CTCCGCCGCCCCAGACCAGCACACGCACCCAAAGGA...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACTCAAGCCATCCTCCTaGCTCAACCTCTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRLKPSS*LNLSSS
Trigger: GCTACTGGAGAGGTTGAGGCAGGAGGATGGCTTGAG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GAACCTCTTCTGGGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACGTCCTCTCAAAGAGATaGTCAATACTGAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EPLLGKTVSCRGADGARYVLSKR*SILSPP
Trigger: TGGAGGACTCAGTATTGAGCATCTCTTTGAGAGGAC...GTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCCCAGAAGAGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCTTCCTCCTGCATCTTaGTCTTCCGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNLPPAS*SSEGSL
Trigger: CAGGGACCCCTCGGAAGACCAAGATGCAGGAGGAAG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACTCAGGATTCGGTTCTaGTTCCACCTCCGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRLRIRF*FHLRLH
Trigger: ATGGAGGCGGAGGTGGAACCAGAACCGAATCCTGAG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCTGGGTGCTGTTTCGTaGCAGGCACTCCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNLGAVS*QALLNW
Trigger: CCAGTTCAGGAGTGCCTGCCACGAAACAGCACCCAG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAAACTGCAGGCGTGTCTaGAACACGGTGATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRNCRRV*NTVMSR
Trigger: CCTGGACATCACCGTGTTCCAGACACGCCTGCAGTT...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GTCCTCTCAAAGAGATGCTCAATACTGAGTCCTCCATCCATGGGGCTTTTTAATGGTGTCCCCAAGCCTTaGAAGGAGAGAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLSKRCSILSPPSMGLFNGVPKP*KERVWP
Trigger: TGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACC...ATTAAAAAGCCCCATGGATGGAGGACTCAGTATTGAGCATCTCTTTGAGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACTCTCTGTCCGCTCCTTaGAGAGCTTCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNSLSAP*RASPAP
Trigger: AGGAGCTGGTGAAGCTCTTCAAGGAGCGGACAGAGA...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCAGAGCTGCAGCCACTaGGGTCACGACTACGGAAAA +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNQSCSH*GHDYGK
Trigger: TTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGATCATAAAAGCAACATaGCACGATCTGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGIIKAT*HDLESF
Trigger: AAAGCTTTCCAGATCGTGTCATGTTGCTTTTATGAT...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGCCAGGTCAGTACCCTaGGGCTGGGACTATTCATTT +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEARSVP*GWDYSF
Trigger: AAATGAATAGTCCCAGCCGCAGGGTACTGACCTGGC...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCCAGGTCAGTACCCTaGGGCTGGGACTATTCATTT +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRARSVP*GWDYSF
Trigger: AAATGAATAGTCCCAGCCGCAGGGTACTGACCTGGC...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATGGGCTCTGGAGCTGGTaGCTCCTTGGGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNGLWSW*LLGFLL
Trigger: AAGGAGGAACCCAAGGAGGCACCAGCTCCAGAGCCC...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACTCACCGTGCTGTCCATaGAGCTGCGGTAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNSPCCP*SCGSRS
Trigger: AGACCTACTACCGCAGCTGCATGGACAGCACGGTGA...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCCCAAGACCTGCACTTaGCCTGCCTGGATGATGTAC +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNPKTCT*PAWMMY
Trigger: GTACATCATCCAGGCAGGGCAAGTGCAGGTCTTGGG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTATGTTGCCCAGTCTaGTCTCCAACTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVELCCPV*SPTLGL
Trigger: GAGGCCAAGAGTTGGAGAGCAGACTGGGCAACATAG...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GTCCTCTCAAAGAGATGCTCAATACTGAGTCCTCCATCCATGGGGCTTTTTAATCTCAGGATTCGGTTCTaGTTCCACCTCCGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VLSKRCSILSPPSMGLFNLRIRF*FHLRLH
Trigger: ATGGAGGCGGAGGTGGAACCAGAACCGAATCCTGAG...ATTAAAAAGCCCCATGGATGGAGGACTCAGTATTGAGCATCTCTTTGAGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCACCTCTGTACCCTGTaGGCTGGTACTGACATCCTG +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNHLCTL*AGTDIL
Trigger: CAGGATGTCAGTACCAGCCCACAGGGTACAGAGGTG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATGTCTGGAGCTGGCTCTaGGGCTTTCTTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNVWSWL*GFLGWG
Trigger: TCCCCAGCCAAGAAAGCCCCAGAGCCAGCTCCAGAC...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTGTAGTTCACGTCGATaGCGAGGTCCAGCCGCATCT +
Preference number: 4 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSCSSRR*RGPAAS
Trigger: AGATGCGGCTGGACCTCGCCATCGACGTGAACTACA...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGATGCACTTGCCCTGCCTaGATGATGTACATCTCACGG +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRCTCPA*MMYISR
Trigger: CCGTGAGATGTACATCATCCAGGCAGGGCAAGTGCA...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACACTGCTCTCCAACTCTTaGCCTCCAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GQIHTDICKPSKASEQLTLLSNS*PPVILL
Trigger: CAGGAGGATCACTGGAGGCCAAGAGTTGGAGAGCAG...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTTTCCTGGGGGCGTCCTaGAGGCGCTGTAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFFLGAS*RRCSNC
Trigger: GCAGTTGCTACAGCGCCTCCAGGACGCCCCCAGGAA...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564448.5
CDS-3UTR TCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACTCCAGGAAGGATGCTaGTGGTCTGCACATCACATA +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRLQEGC*WSAHHI
Trigger: TATGTGATGTGCAGACCATCAGCATCCTTCCTGGAG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACGACTATAAGGGTGTCTaGTTTGGCAGGAGACGGTGG +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNDYKGV*FGRRRW
Trigger: CCACCGTCTCCTGCCAAATCAGACACCCTTATAGTC...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACGTGTGTCCCCGAGGCTaGGCTTGGGACTATAAGGGT +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYVCPRG*AWDYKG
Trigger: ACCCTTATAGTCCCAAGCTCAGCCTCGGGGACACAC...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTTGTCCAGGAAGTAGATaGGGTCGCATAGGTAATCCA +
Preference number: 4 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLCPGSR*GRIGNP
Trigger: TGGATTACCTATGCGACCTCATCTACTTCCTGGACA...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACACTCGTACCAGGTCTTaGCGCGGTTCTGCACGGACT +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYTRTRS*RGSART
Trigger: AGTCCGTGCAGAACCGCGTCAAGACCTGGTACGAGT...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACAGCCTTCCTCTCCCTTaGCGTCTTGCGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYSLPLP*RLASSW
Trigger: CCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCT...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGACTCTTTCCAGATTCTaGTCCAGCCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVETLSRF*SSHRSS
Trigger: GCTGCTTCTGTGGCTGGAGCAGAATCTGGAAAGAGT...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTGCTTCTGATCTGAAGTaGTCTGGGGCCGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFASDLK*SGAGSR
Trigger: ACGGGACCCGGCCCCAGAGCACTTCAGATCAGAAGC...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACAAGTTTGCCGCCTTTTaGCCCCTTGCCACCCATCTT +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNKFAAF*PLATHL
Trigger: AAGATGGGTGGCAAGGGGGCAAAAGGCGGCAAACTT...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATTCCACCAACTCTTGCTaGTTTGCAGCCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNSTNSC*FAAASS
Trigger: GCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGA...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTGGAAAGCTTTAGGGAATGTAAGTGCTGTCATCAGCTGGGAGATTTCATTTTCCTCAGGATTCGGTTCTaGTTCCACCTCCGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LESFRECKCCHQLGDFIFLRIRF*FHLRLH
Trigger: ATGGAGGCGGAGGTGGAACCAGAACCGAATCCTGAG...GAAAATGAAATCTCCCAGCTGATGACAGCACTTACATTCCCTAAAGCTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAGCGGGCTTTGTGTCTaGAGCTGGCTCTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNSGLCV*SWLWGF
Trigger: AAAGCCCCAGAGCCAGCTCCAGACACAAAGCCCGCT...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAAGCGGGTCAATGCTCTaGGGAAACTGGTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRSGSML*GNWYFF
Trigger: GAAGAAGTACCAGTTTCCCCAGAGCATTGACCCGCT...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCGTCTTGCGAGCTCTTaGCCTGTTCCACCAACTCTT +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNRLASS*PVPPTL
Trigger: AAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGATGCTTAGACCAGCCTaGGGACTCCCACATTCTTTC +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEMLRPA*GLPHSF
Trigger: GAAAGAATGTGGGAGTCCCCAGGCTGGTCTAAGCAT...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTGTGTGTCCCCGAGGCTaGGCTTGGGACTATAAGGGT +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFVCPRG*AWDYKG
Trigger: ACCCTTATAGTCCCAAGCTCAGCCTCGGGGACACAC...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCAGGATGCTGATGGTCTaGACATCACATATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSRMLMV*TSHIPG
Trigger: CCCTGGGATATGTGATGTGCAGACCATCAGCATCCT...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATTCATCCAGCATGCCTTaGGAGTGCCAGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNSSSMP*ECQVYS
Trigger: CGAGTACACCTGGCACTCGCAAGGCATGCTGGATGA...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGATCTTGTCTGGAAGCTaGACCATCAGCTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEILSGS*TISSDS
Trigger: TGAGTCAGAGCTGATGGTGCAGCTTCCAGACAAGAT...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACCCCAAGACCTGCACTTaGCCTGCCTGGATGATGTAC +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYPKTCT*PAWMMY
Trigger: GTACATCATCCAGGCAGGGCAAGTGCAGGTCTTGGG...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTCTGGGTGCTGTTTCGTaGCAGGCACTCCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFLGAVS*QALLNW
Trigger: CCAGTTCAGGAGTGCCTGCCACGAAACAGCACCCAG...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTCGTAAACCCAGTGAGTaGAGCCGAGGCCCTGATAGG +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFRKPSE*SRGPDR
Trigger: CCTATCAGGGCCTCGGCTCCACTCACTGGGTTTACG...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACTTCTCAGCATGCGCCTaGCTTTCTTCCGGAGTAACT +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNFSACA*LSSGVT
Trigger: AGTTACTCCGGAAGAAAGCCAGGCGCATGCTGAGAA...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACTCATGTACTTCACCGTaGTGTCCATGCAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYSCTSP*CPCSCG
Trigger: ACCGCAGCTGCATGGACAGCACGGTGAAGTACATGA...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATCCTTGGGCTTATTGTTaGTTCTCAGCATGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNPWAYC*FSACAW
Trigger: CCAGGCGCATGCTGAGAAGCAACAATAAGCCCAAGG...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACGAGGTCTCGCTATGTTaGCCAGTCTGCTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYEVSLC*PVCSPT
Trigger: AGTTGGAGAGCAGACTGGGCAACATAGCGAGACCTC...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGATCAGTACCCTGCGGCTaGGACTATTCATTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRSVPCG*DYSFQK
Trigger: TTTCTGAAATGAATAGTCCCAGCCGCAGGGTACTGA...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCTCTTCTTCATAAGCTaGAACCACCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNLFFIS*NHLCTL
Trigger: CAGGGTACAGAGGTGGTTCCAGCTTATGAAGAAGAG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTGGAAAGCTTTAGGGAATGTAAGTGCTGTCATCAGCTGGGAGATTTCATTTTCGGACATACATCAGGTTaGTCAGCGGGTCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: LESFRECKCCHQLGDFIFGHTSG*SAGQCS
Trigger: AGAGCATTGACCCGCTGACCAACCTGATGTATGTCC...GAAAATGAAATCTCCCAGCTGATGACAGCACTTACATTCCCTAAAGCTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTCAGCCGCATCTTGTCTaGAAGCTGCACCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFQPHLV*KLHHQL
Trigger: GAGCTGATGGTGCAGCTTCCAGACAAGATGCGGCTG...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTCTGCTCTCCAACTCTTaGCCTCCAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFLLSNS*PPVILL
Trigger: CAGGAGGATCACTGGAGGCCAAGAGTTGGAGAGCAG...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAGGATGCTGATGGTCTaGACATCACATATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNRMLMV*TSHIPG
Trigger: CCCTGGGATATGTGATGTGCAGACCATCAGCATCCT...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTTGGTCAGCGGGTCAATaGTCTGGGGAAACTGGTACT +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFWSAGQ*SGETGT
Trigger: AGTACCAGTTTCCCCAGAGCATTGACCCGCTGACCA...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATGCCCTGATAGGCCGATaGCCAGTAATAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNALIGR*PVIKTG
Trigger: TCCTGTCTTTATTACTGGGCATCGGCCTATCAGGGC...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCACAGCCCTGAAAGAGTaGGACTTTGCTAACGATGTT +
Preference number: 4 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSTALKE*DFANDV
Trigger: AACATCGTTAGCAAAGTCGCACTCTTTCAGGGCTGT...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTCCTTGGGCTTATTGTTaGTTCTCAGCATGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFPWAYC*FSACAW
Trigger: CCAGGCGCATGCTGAGAAGCAACAATAAGCCCAAGG...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATGGACATACATCAGGTTaGTCAGCGGGTCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNGHTSG*SAGQCS
Trigger: AGAGCATTGACCCGCTGACCAACCTGATGTATGTCC...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCACAGGTTCTGCACGGACTTaGGGATCTTGTAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: GQIHTDICKPSKASEQLTGSART*GSCRNS
Trigger: TGAATTTCTACAAGATCCCCAAGTCCGTGCAGAACC...TGTGAGCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAAAGCTTCCCATGTATTaGAGCCTCATTTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: LSNDSESSGTRTLDATCRKLPMY*SLILSL
Trigger: GAGGGATAAAATGAGGCTCCAATACATGGGAAGCTT...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACGCATTGCATTGGAATTaGATAGAGTCTGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNALHWN*IESGED
Trigger: ATCTTCCCCAGACTCTATTCAATTCCAATGCAATGC...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTAGCGGGTCAATGCTCTaGGGAAACTGGTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFSGSML*GNWYFF
Trigger: GAAGAAGTACCAGTTTCCCCAGAGCATTGACCCGCT...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACAGCTTCCCAAACTGCTaGGATTGCAGATGTGAACCA +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYSFPNC*DCRCEP
Trigger: TGGTTCACATCTGCAATCCCAGCAGTTTGGGAAGCT...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR TCA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACTTTTCTAGGATTAATTaGAGTTGCTGCCACCATCTC +
Preference number: 4 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNFSRIN*SCCHHL
Trigger: GAGATGGTGGCAGCAACTTCAATTAATCCTAGAAAA...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR GCA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTATCTTGTCTGGAAGCTaGACCATCAGCTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFILSGS*TISSDS
Trigger: TGAGTCAGAGCTGATGGTGCAGCTTCCAGACAAGAT...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR GCA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGTTTGCTTTTGTTTCTaGTGCTGTTTTGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEVCFCF*CCFVEM
Trigger: CATCTCTACAAAACAGCAGCAGAAACAAAAGCAAAC...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACAAGCTTCCCATGTATTaGAGCCTCATTTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: GPLCSLLQVETNGLILEYKLPMY*SLILSL
Trigger: GAGGGATAAAATGAGGCTCCAATACATGGGAAGCTT...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CCA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATCCCCCAAGAGCCATTTaGTATGCAAATAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNPPRAI*YANKIL
Trigger: GAGGATTTTATTTGCATACCAAATGGCTCTTGGGGG...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTCCCGGGCCTGCAGCTaGGGCCCCATTTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AGAQRALGTHLLELRAGSSRACS*GPISWG
Trigger: CCCCCAGGAAATGGGGCCCAAGCTGCAGGCCCGGGA...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 90 bp GTCCGGGGCGCGGGTGGGTCGGTGGCGGCCTCCTTTGGGTGCGTGTaGTGGTCTGGGGCGGCGGAGCCTTCCTCTCCCTTGACGTCTTGC +
Preference number: 5 (lower is better)
Translates to: VRGAGGSVAASFGCV*WSGAAEPSSPLTSC
Trigger: GCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAAGGAGGCCGCCACCGACCCACCCGCGCCCCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 90 bp CGGGGCGCGGGTGGGTCGGTGGCGGCCTCCTTTGGGTGCGTGTGCTaGTCTGGGGCGGCGGAGCCTTCCTCTCCCTTGACGTCTTGCGAG +
Preference number: 5 (lower is better)
Translates to: RGAGGSVAASFGCVC*SGAAEPSSPLTSCE
Trigger: CTCGCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAAGGAGGCCGCCACCGACCCACCCGCGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCGGAGCTGGTGCCTCCTaGGGTTCCTCCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIGAGAS*GSSLGC
Trigger: GCAGCCCAAGGAGGAACCCAAGGAGGCACCAGCTCC...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCCAACTCTTGCTGCTTaGCAGCCGCCTCCAGCGCGG +
Preference number: 5 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIPTLAA*QPPPAR
Trigger: CCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGG...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTCCCGGGCCTGCAGCTaGGGCCCCATTTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: TCRAQAQPREELSRGWRASRACS*GPISWG
Trigger: CCCCCAGGAAATGGGGCCCAAGCTGCAGGCCCGGGA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 90 bp TCTTCACCGACAGGATCTGCTCTCCCGGCTCCGGGCCCGGGCTCATaGAGATCCTCACCGAGTGCTCTTCGGGCTCGGCCGGCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SSPTGSALPAPGPGS*RSSPSALRARPAPP
Trigger: AGGAGGGGCCGGCCGAGCCCGAAGAGCACTCGGTGAGGATCTGCATGAGCCCGGGCCCGGAGCCGGGAGAGCAGATCCTGTCGGTGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCTCTTCAGCCTCCTTCTaGGCCTCCTCCCCAACTTCC +
Preference number: 5 (lower is better)
Translates to: RRGAAGAGDTPAGTARGISSASF*ASSPTS
Trigger: GGAAGTTGGGGAGGAGGCCAAGAAGGAGGCTGAAGA...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGTGGCGGCAACACGGTaGAGGGTGGATTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: AGAQRALGTHLLELRAGSVAATR*RVDSLL
Trigger: CAGAAGAGAATCCACCCTCAACCGTGTTGCCGCCAC...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCTCATCCAGCATGCCTaGCGAGTGCCAGGTGTACTC +
Preference number: 5 (lower is better)
Translates to: RRGAAGAGDTPAGTARGILIQHA*RVPGVL
Trigger: GAGTACACCTGGCACTCGCAAGGCATGCTGGATGAG...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCAGGTCCAGCCGCATCTaGTCTGGAAGCTGCACCATC +
Preference number: 5 (lower is better)
Translates to: AGAQRALGTHLLELRAGSRSSRI*SGSCTI
Trigger: GATGGTGCAGCTTCCAGACAAGATGCGGCTGGACCT...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACATAGCGAGGGCAGCGTaGAAGAGCTTTGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RALGTHLLELRAGSASPHIARAA*KSFGVP
Trigger: GGGCACCCCAAAGCTCTTCAACGCTGCCCTCGCTAT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 90 bp GGGGTTCAGCTGGGGGCTGTGGCGTTCATCCCAAGCCTGGGTCGGTaGATGCAAGTGGGAGCCCAGCTCCCGAGCCAGGGTGGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GVQLGAVAFIPSLGR*MQVGAQLPSQGGSS
Trigger: ACTGGAGCCACCCTGGCTCGGGAGCTGGGCTCCCACTTGCATGCACCGACCCAGGCTTGGGATGAACGCCACAGCCCCCAGCTGAACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS CCA 90 bp TGGGGGCTGTGGCGTTCATCCCAAGCCTGGGTCGGTGCATGCAAGTaGGAGCCCAGCTCCCGAGCCAGGGTGGCTCCAGTGGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: WGLWRSSQAWVGACK*EPSSRARVAPVAEE
Trigger: CTCCTCTGCCACTGGAGCCACCCTGGCTCGGGAGCTGGGCTCCCACTTGCATGCACCGACCCAGGCTTGGGATGAACGCCACAGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS-3UTR CAA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACTCTTCCTCCTGCATCTaGGTCTTCCGAGGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: RALGTHLLELRAGSASPHSSSCI*VFRGVP
Trigger: AGGGACCCCTCGGAAGACCAAGATGCAGGAGGAAGA...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCTGGTGACAACGCCTaGAGCTCTTCAGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: AGAQRALGTHLLELRAGSAGDNA*SSSASS
Trigger: TGATGAGGCTGAAGAGCTCAAGGCGTTGTCACCAGC...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCTTCTCTGTCCGCTCCTaGAAGAGCTTCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIFSVRS*KSFTSS
Trigger: GGAGCTGGTGAAGCTCTTCAAGGAGCGGACAGAGAA...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTTGGCTGGGGAGGGCTaGGGGCTCTCCTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: CNLSSSGPAPRGAESGLALAGEG*GLSSSE
Trigger: CTCTGATGAGGAGAGCCCCAAGCCCTCCCCAGCCAA...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACGAGCCTTCCTCTCCCTaGACGTCTTGCGAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RALGTHLLELRAGSASPHEPSSP*TSCELL
Trigger: CAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTC...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 90 bp TTCAGCTGGGGGCTGTGGCGTTCATCCCAAGCCTGGGTCGGTGCATaGAAGTGGGAGCCCAGCTCCCGAGCCAGGGTGGCTCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: FSWGLWRSSQAWVGA*KWEPSSRARVAPVA
Trigger: TGCCACTGGAGCCACCCTGGCTCGGGAGCTGGGCTCCCACTTGCATGCACCGACCCAGGCTTGGGATGAACGCCACAGCCCCCAGCTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS-3UTR CAA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTCCGCCTTTTGCCCCCTaGCCACCCATCTTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: TCRAQAQPREELSRGWRAPPFAP*PPIFPV
Trigger: GACAGGAAAGATGGGTGGCAAGGGGGCAAAAGGCGG...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACACGTCTTGCGAGCTCTaGGCCTGTTCCACCAACTCT +
Preference number: 5 (lower is better)
Translates to: RALGTHLLELRAGSASPHTSCEL*ACSTNS
Trigger: AGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGT...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CGCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCAGGGACTCGAACACTaGATGCAACTTGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RRGAAGAGDTPAGTARGIQGLEH*MQLVEL
Trigger: GAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTG...GATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS TCA 90 bp GCAGCCGCCTCCAGCGCGGCCAGTTCTTTGAGCCGGGCCCGGAGGTaGGCAAGTTTGCCGCCTTTTGCCCCCTTGCCACCCATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: AAASSAASSLSRARR*ASLPPFAPLPPIFP
Trigger: AGGAAAGATGGGTGGCAAGGGGGCAAAAGGCGGCAAACTTGCTCACCTCCGGGCCCGGCTCAAAGAACTGGCCGCGCTGGAGGCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 90 bp TCCGCCTTCTCCTCCCTTTCCTCCGGCATCTTCACCGACAGGATCTaGTCTCCCGGCTCCGGGCCCGGGCTCATGCAGATCCTCACCGAG +
Preference number: 5 (lower is better)
Translates to: SAFSSLSSGIFTDRI*SPGSGPGLMQILTE
Trigger: CTCGGTGAGGATCTGCATGAGCCCGGGCCCGGAGCCGGGAGAGCAGATCCTGTCGGTGAAGATGCCGGAGGAAAGGGAGGAGAAGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTCTTCAGCCTCCTTCTaGGCCTCCTCCCCAACTTCC +
Preference number: 5 (lower is better)
Translates to: CNLSSSGPAPRGAESGLASSASF*ASSPTS
Trigger: GGAAGTTGGGGAGGAGGCCAAGAAGGAGGCTGAAGA...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGCTGAGCAGGTCCATCTaGAAGCGGCGAGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: CNLSSSGPAPRGAESGLALSRSI*KRRDFR
Trigger: CCTGAAGTCTCGCCGCTTCAAGATGGACCTGCTCAG...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGCGGTGGCGGCCTCCTTaGGGTGCGTGTGCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: QDDRQRMLLPGCSSWQRQRWRPP*GACAGL
Trigger: CAGACCAGCACACGCACCCAAAGGAGGCCGCCACCG...CTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS TCA 90 bp CCAACTCTTGCTGCTTTGCAGCCGCCTCCAGCGCGGCCAGTTCTTTaGGCCGGGCCCGGAGGTGAGCAAGTTTGCCGCCTTTTGCCCCCT +
Preference number: 5 (lower is better)
Translates to: PTLAALQPPPARPVL*AGPGGEQVCRLLPP
Trigger: AGGGGGCAAAAGGCGGCAAACTTGCTCACCTCCGGGCCCGGCTCAAAGAACTGGCCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 90 bp GACGTCTTGCGAGCTCTTGGCCTGTTCCACCAACTCTTGCTGCTTTaGAGCCGCCTCCAGCGCGGCCAGTTCTTTGAGCCGGGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: DVLRALGLFHQLLLL*SRLQRGQFFEPGPE
Trigger: CTCCGGGCCCGGCTCAAAGAACTGGCCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TGTGTGGAGAGGGAGGGGTTCGCTGTTCAAATAGGGTGGGGTGTCAGTGGCCACTCCCGGGCCTGCAGCTaGGGCCCCATTTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: CVEREGFAVQIGWGVSGHSRACS*GPISWG
Trigger: CCCCCAGGAAATGGGGCCCAAGCTGCAGGCCCGGGA...GTGGCCACTGACACCCCACCCTATTTGAACAGCGAACCCCTCCCTCTCCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CAA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGCCGTGCGCCACCACGTaGGCCGTGCGCCGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: SESSGTRTLDATCRAQAQPCATT*AVRRFP
Trigger: CGGGAACCGGCGCACGGCCAACGTGGTGGCGCACGG...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS TCA 90 bp TCCTCTTCCTCCTGCATCTTGGTCTTCCGAGGGGTCCCTGGGGGCTaGGGCAGCACCCTCTGGACCCAGCCCAACATCCTGATGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SSSSCILVFRGVPGG*GSTLWTQPNILMPA
Trigger: AGCAGGCATCAGGATGTTGGGCTGGGTCCAGAGGGTGCTGCCTCAGCCCCCAGGGACCCCTCGGAAGACCAAGATGCAGGAGGAAGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251102.13
ENST00000311183.8
ENST00000564448.5
ENST00000567568.1
CDS-3UTR CAA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGGGAGCTGGTGCCTCCTaGGGTTCCTCCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRGAGAS*GSSLGC
Trigger: GCAGCCCAAGGAGGAACCCAAGGAGGCACCAGCTCC...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTCCTCCTTGGGCTTATaGTTGCTTCTCAGCATGCGC +
Preference number: 5 (lower is better)
Translates to: CNLSSSGPAPRGAESGLASSLGL*LLLSMR
Trigger: GCGCATGCTGAGAAGCAACAATAAGCCCAAGGAGGA...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GCAGGGGCGCAGCGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGGCATTGCATTGGAATaGAATAGAGTCTGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: AGAQRALGTHLLELRAGSGIALE*NRVWGR
Trigger: TCTTCCCCAGACTCTATTCAATTCCAATGCAATGCC...GGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCGCTGCGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS TCA 90 bp TTGGGTGCGTGTGCTGGTCTGGGGCGGCGGAGCCTTCCTCTCCCTTaGCGTCTTGCGAGCTCTTGGCCTGTTCCACCAACTCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LGACAGLGRRSLPLP*RLASSWPVPPTLAA
Trigger: AGCAGCAAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS TCA 90 bp TCCTCTTCCTCCTGCATCTTGGTCTTCCGAGGGGTCCCTGGGGGCTaGGGCAGCACCCTCTGGACCCAGCCCAACATCCTGATGCCTGTA +
Preference number: 5 (lower is better)
Translates to: SSSSCILVFRGVPGG*GSTLWTQPNILMPV
Trigger: TACAGGCATCAGGATGTTGGGCTGGGTCCAGAGGGTGCTGCCTCAGCCCCCAGGGACCCCTCGGAAGACCAAGATGCAGGAGGAAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562761.1
CDS CCA 90 bp GCCACCCATCTTTCCTGTCATAGCGAGGGCAGCGTTGAAGAGCTTTaGGGTGCCCGCCCGGGGTGGAAGGATCAGCACGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: ATHLSCHSEGSVEEL*GARPGWKDQHALLL
Trigger: GAGGAGAAGAGCGTGCTGATCCTTCCACCCCGGGCGGGCACCCCAAAGCTCTTCAACGCTGCCCTCGCTATGACAGGAAAGATGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 90 bp GGGAGGGTAGTTGGGAGGCGGGCTGGCCCTGAAGAGAGGGGAGGGTaGTGCAGTACCTATTCATTTCAGAAATCTCAGCGCCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: GRVVGRRAGPEERGG*CSTYSFQKSQRPGP
Trigger: GGGCCCAGGGCGCTGAGATTTCTGAAATGAATAGGTACTGCACCACCCTCCCCTCTCTTCAGGGCCAGCCCGCCTCCCAACTACCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567568.1
CDS-3UTR CAA 90 bp TGTGTGGAGAGGGAGGGGTTCGCTGTTCAAATAGGGTGGGGTGTCAGTGGCCACGGAGCTGGTGCCTCCTaGGGTTCCTCCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: CVEREGFAVQIGWGVSGHGAGAS*GSSLGC
Trigger: GCAGCCCAAGGAGGAACCCAAGGAGGCACCAGCTCC...GTGGCCACTGACACCCCACCCTATTTGAACAGCGAACCCCTCCCTCTCCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CAA 90 bp TGCAACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGACGCTCTTCTCCTCCTaGGGCTTATTGTTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: CNLSSSGPAPRGAESGLATLFSS*GLLLLL
Trigger: GAGAAGCAACAATAAGCCCAAGGAGGAGAAGAGCGT...CGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GACGGTGCCAGGTACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCCAGGGTCTCACTGTGTaGCCCACGGTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: DGARYHTGGCARVLSKRCQGLTV*PTVVSN
Trigger: GTTCGAGACCACCGTGGGCAACACAGTGAGACCCTG...GCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTACCTGGCACCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS TCA 90 bp CTCCTTCTTGGCCTCCTCCCCAACTTCCTCCCACAGCTTCTGATCTaGAGTGCTCTGGGGCCGGGTCCCGTCTTCTTCACTCTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: LLLGLLPNFLPQLLI*SALGPGPVFFTLAH
Trigger: GTGGGCCAGAGTGAAGAAGACGGGACCCGGCCCCAGAGCACTTCAGATCAGAAGCTGTGGGAGGAAGTTGGGGAGGAGGCCAAGAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000564654.1
CDS GCA 90 bp TCATTCAGGTCCTTCTTATCCAGGATGAAGAGGTTGGTAAACCCGTaGGCCACCACGTTGGCCGTGCGCCGGTTCCCGCCCCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: SFRSFLSRMKRLVNP*ATTLAVRRFPPPTA
Trigger: GGCTGTTGGGGGCGGGAACCGGCGCACGGCCAACGTGGTGGCGCACGGGTTTACCAACCTCTTCATCCTGGATAAGAAGGACCTGAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000565942.1
CDS GCA 90 bp AGGGTAGTTGGGAGGCGGGCTGGCCCTGAAGAGAGGGGAGGGTGGTaGAGTACCTATTCATTTCAGAAATCTCAGCGCCCTGGGCCCGGA +
Preference number: 5 (lower is better)
Translates to: RVVGRRAGPEERGGW*STYSFQKSQRPGPG
Trigger: TCCGGGCCCAGGGCGCTGAGATTTCTGAAATGAATAGGTACTGCACCACCCTCCCCTCTCTTCAGGGCCAGCCCGCCTCCCAACTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567568.1
CDS-3UTR CAA 90 bp CAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGGTGGCGGCAACACGGTaGAGGGTGGATTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: QDDRQRMLLPGCSSWQRQVAATR*RVDSLL
Trigger: CAGAAGAGAATCCACCCTCAACCGTGTTGCCGCCAC...CTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp ACTTGTCGAGCTCAGGCCCAGCCCCGCGAGGAGCTGAGTCGGGGCTGGCGTGCTTTTCGCATGTCCTTTTaGTCCGTAATGATGTCCCCG +
Preference number: 5 (lower is better)
Translates to: TCRAQAQPREELSRGWRAFRMSF*SVMMSP
Trigger: CGGGGACATCATTACGGACAAAAAGGACATGCGAAA...AGCACGCCAGCCCCGACTCAGCTCCTCGCGGGGCTGGGCCTGAGCTCGACAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGAGGTCCAGCCGCATCTaGTCTGGAAGCTGCACCATC +
Preference number: 5 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWRSSRI*SGSCTI
Trigger: GATGGTGCAGCTTCCAGACAAGATGCGGCTGGACCT...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGCAGAAACGCTAGCAGCTCCTGGTCCAGGATGAAGAGGTaGGTAAACCCGTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: CSYRAVPPGRGRNASSSWSRMKR*VNPCAT
Trigger: GGTGGCGCACGGGTTTACCAACCTCTTCATCCTGGA...CCAGGAGCTGCTAGCGTTTCTGCCTCTGCCAGGAGGAACAGCCCGGTAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp CGGGCGCTGGGGACACACCTGCTGGAACTGCGCGCGGGATCCGCCTCACCCCACGTACGTTGTTGTTGTTaGCTTTTGTTTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RALGTHLLELRAGSASPHVRCCC*LLFLLL
Trigger: CAGCAGCAGAAACAAAAGCAAACAACAACAACGTAC...GTGGGGTGAGGCGGATCCCGCGCGCAGTTCCAGCAGGTGTGTCCCCAGCGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS CCA 90 bp GCTGGAACCACCTCTGTACCCTGTGGGCTGGTACTGACATCCTGGTaGGCATCCTCCCAGGGCGGTTCAACCTCCTCTAGGACAAGGTCA +
Preference number: 5 (lower is better)
Translates to: AGTTSVPCGLVLTSW*ASSQGGSTSSRTRS
Trigger: TGACCTTGTCCTAGAGGAGGTTGAACCGCCCTGGGAGGATGCCCACCAGGATGTCAGTACCAGCCCACAGGGTACAGAGGTGGTTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 90 bp CCACCTCCTCGGCCTCCTCCTTGGCCTTCTCTTCAGCCTCCTTCTTaGCCTCCTCCCCAACTTCCTCCCACAGCTTCTGATCTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PPPRPPPWPSLQPPS*PPPQLPPTASDLKC
Trigger: GCACTTCAGATCAGAAGCTGTGGGAGGAAGTTGGGGAGGAGGCCAAGAAGGAGGCTGAAGAGAAGGCCAAGGAGGAGGCCGAGGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000564654.1
CDS CCA 90 bp CATAGCGAGGGCAGCGTTGAAGAGCTTTGGGGTGCCCGCCCGGGGTaGAAGGATCAGCACGCTCTTCTCCTCCTTGGGCTTATTGTTGCT +
Preference number: 5 (lower is better)
Translates to: HSEGSVEELWGARPG*KDQHALLLLGLIVA
Trigger: AGCAACAATAAGCCCAAGGAGGAGAAGAGCGTGCTGATCCTTCCACCCCGGGCGGGCACCCCAAAGCTCTTCAACGCTGCCCTCGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTGCTCATTGGTGTCCCCAAGCCTTGGAAGGAGAGAGTGTGGCCAGGCCTAGGGTCTTCCTCCTGCATCTaGGTCTTCCGAGGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LLIGVPKPWKERVWPGLGSSSCI*VFRGVP
Trigger: AGGGACCCCTCGGAAGACCAAGATGCAGGAGGAAGA...CCCTAGGCCTGGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCAATGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS-3UTR CAA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCGGTGGCGGCCTCCTTaGGGTGCGTGTGCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPRWRPP*GACAGL
Trigger: CAGACCAGCACACGCACCCAAAGGAGGCCGCCACCG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGAAAAACTGTATCCTGTCGAGGTGCTGACGGTGCCAGGTACCACACTGGGGGCTGGTGTCCCCAAGCCTaGGAAGGAGAGAGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GKTVSCRGADGARYHTGGWCPQA*EGESVA
Trigger: GGCCACACTCTCTCCTTCCAAGGCTTGGGGACACCA...GCCCCCAGTGTGGTACCTGGCACCGTCAGCACCTCGACAGGATACAGTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS GCA 90 bp AGGGGGCAGCTATCAGCATCAGTATCTTCCACCTGCACTTCTGGGTaGTGTTTCGTGGCAGGCACTCCTGAACTGGCAGCCTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RGQLSASVSSTCTSG*CFVAGTPELAASAS
Trigger: TGAGGCCGAGGCTGCCAGTTCAGGAGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAAGATACTGATGCTGATAGCTGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGAAGGTCAGGCTCCACTaGTCCTCCAGGAAGGATGCT +
Preference number: 5 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRKVRLH*SSRKDA
Trigger: AGCATCCTTCCTGGAGGACAAGTGGAGCCTGACCTT...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGGGGCGGTGTTTGAACTaGCAGCAGAGCATGTCGCAA +
Preference number: 5 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRGRCLN*QQSMSQ
Trigger: TTGCGACATGCTCTGCTGCAAGTTCAAACACCGCCC...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp CCACGCCCGGCTATGGGCCTTTTCCACAGCCCTCTGGGGGTAAGTCCTGCTGTCATTTGTTGCTGCTCATaGGTGTCCCCAAGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: PRPAMGLFHSPLGVSPAVICCCS*VSPSLG
Trigger: TCCAAGGCTTGGGGACACCAATGAGCAGCAACAAAT...GACAGCAGGACTTACCCCCAGAGGGCTGTGGAAAAGGCCCATAGCCGGGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS CCA 90 bp AGTACCCTGCGGCTGGGACTATTCATTTCAGAAATCTCAGCGCCCTaGGCCCGGAGGGATATGGTGGAAGTAAGGGCAGCCTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: STLRLGLFISEISAP*ARRDMVEVRAASLV
Trigger: GACCAAGGAGGCTGCCCTTACTTCCACCATATCCCTCCGGGCCCAGGGCGCTGAGATTTCTGAAATGAATAGTCCCAGCCGCAGGGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251102.13
ENST00000311183.8
ENST00000562761.1
ENST00000564448.5
CDS CCA 90 bp TTTGAACTTGCAGCAGAGCATGTCGCAATAGTGCTCCTCTTCCACTaGCTCGGCTTCAGCGGGCTTTGTGTCTGGAGCTGGCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: FELAAEHVAIVLLFH*LGFSGLCVWSWLWG
Trigger: GCCCCAGAGCCAGCTCCAGACACAAAGCCCGCTGAAGCCGAGCCAGTGGAAGAGGAGCACTATTGCGACATGCTCTGCTGCAAGTTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 90 bp GGGAGGGTGGTGCAGTACCTATTCATTTCAGAAATCTCAGCGCCCTaGGCCCGGAGGGATATGGTGGAAGTAAGGGCAGCCTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GRVVQYLFISEISAP*ARRDMVEVRAASLV
Trigger: GACCAAGGAGGCTGCCCTTACTTCCACCATATCCCTCCGGGCCCAGGGCGCTGAGATTTCTGAAATGAATAGGTACTGCACCACCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567568.1
CDS-3UTR CAA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGCCAGGAATTGCCTTCTaGCTGCCACTCGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGPGIAF*LPLVAG
Trigger: GCCAGCTACGAGTGGCAGCAAGAAGGCAATTCCTGG...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGTACTCGTACCAGGTCTaGACGCGGTTCTGCACGGAC +
Preference number: 5 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGYSYQV*TRFCTD
Trigger: GTCCGTGCAGAACCGCGTCAAGACCTGGTACGAGTA...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTACTCGTACCAGGTCTaGACGCGGTTCTGCACGGAC +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLYSYQV*TRFCTD
Trigger: GTCCGTGCAGAACCGCGTCAAGACCTGGTACGAGTA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGGCCCAAGACCTGCACTaGCCCTGCCTGGATGATGTA +
Preference number: 5 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGAQDLH*PCLDDV
Trigger: TACATCATCCAGGCAGGGCAAGTGCAGGTCTTGGGC...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTCCAGGATGAAGAGGTaGGTAAACCCGTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLSRMKR*VNPCAT
Trigger: GGTGGCGCACGGGTTTACCAACCTCTTCATCCTGGA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCCTGTTCCACCAACTCTaGCTGCTTTGCAGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLLFHQL*LLCSRL
Trigger: GAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACAG...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCGAGCCTTCCTCTCCCTaGACGTCTTGCGAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLEPSSP*TSCELL
Trigger: CAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTC...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TACCACACTGGGGGCTGTGCACGCGTCCTCTCAAAGAGATGCTCAATACTGAGTTGGCTGGCCTTCCCCTaGTTCTGGTCTGGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: YHTGGCARVLSKRCSILSWLAFP*FWSGRL
Trigger: GAGCCTCCCAGACCAGAACAAGGGGAAGGCCAGCCA...ACTCAGTATTGAGCATCTCTTTGAGAGGACGCGTGCACAGCCCCCAGTGTGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311183.8
CDS TCA 90 bp CTTCTTCATAAGCTGGAACCACCTCTGTACCCTGTGGGCTGGTACTaGCATCCTGGTGGGCATCCTCCCAGGGCGGTTCAACCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: LLHKLEPPLYPVGWY*HPGGHPPRAVQPPL
Trigger: TAGAGGAGGTTGAACCGCCCTGGGAGGATGCCCACCAGGATGTCAGTACCAGCCCACAGGGTACAGAGGTGGTTCCAGCTTATGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS TCA 90 bp TGGCCAGGTATCTGGTCCTGGACTAGGCAATTCAGCTCCATGTTCTaGCATGGTGTAGCCATGGTGCTGGGGCCAGAGAGTCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: WPGIWSWTRQFSSMF*HGVAMVLGPESLRQ
Trigger: CTGCCTGAGACTCTCTGGCCCCAGCACCATGGCTACACCATGTCAGAACATGGAGCTGAATTGCCTAGTCCAGGACCAGATACCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS GCA 90 bp GGATCTTGTAGAAATTCATGTACTTCACCGTGCTGTCCATGCAGCTaGGGTAGTAGGTCTGTCCGGCGGTGGCGGCCCCTACCACATCTC +
Preference number: 5 (lower is better)
Translates to: GSCRNSCTSPCCPCS*GSRSVRRWRPLPHL
Trigger: GAGATGTGGTAGGGGCCGCCACCGCCGGACAGACCTACTACCGCAGCTGCATGGACAGCACGGTGAAGTACATGAATTTCTACAAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS GCA 90 bp ACTTGGGGATCTTGTAGAAATTCATGTACTTCACCGTGCTGTCCATaGAGCTGCGGTAGTAGGTCTGTCCGGCGGTGGCGGCCCCTACCA +
Preference number: 5 (lower is better)
Translates to: TWGSCRNSCTSPCCP*SCGSRSVRRWRPLP
Trigger: TGGTAGGGGCCGCCACCGCCGGACAGACCTACTACCGCAGCTGCATGGACAGCACGGTGAAGTACATGAATTTCTACAAGATCCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS GCA 90 bp TCTGCACGGACTTGGGGATCTTGTAGAAATTCATGTACTTCACCGTaGTGTCCATGCAGCTGCGGTAGTAGGTCTGTCCGGCGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: SARTWGSCRNSCTSP*CPCSCGSRSVRRWR
Trigger: CCGCCACCGCCGGACAGACCTACTACCGCAGCTGCATGGACAGCACGGTGAAGTACATGAATTTCTACAAGATCCCCAAGTCCGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCAAGGTCAGGCTCCACTaGTCCTCCAGGAAGGATGCT +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLKVRLH*SSRKDA
Trigger: AGCATCCTTCCTGGAGGACAAGTGGAGCCTGACCTT...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCGCTGGTGACAACGCCTaGAGCTCTTCAGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLAGDNA*SSSASS
Trigger: TGATGAGGCTGAAGAGCTCAAGGCGTTGTCACCAGC...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp ATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCCCGCCTTTTGCCCCCTaGCCACCCATCTTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: IVRAQGLEHLMQLVELRPPPFAP*PPIFPV
Trigger: GACAGGAAAGATGGGTGGCAAGGGGGCAAAAGGCGG...GGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTTGAGCCGTGGGGAAAAGCATCTTCTCTaGAGCCGTGGGGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: AAATEVTTTEKHLLLSRGEKHLL*SRGGRW
Trigger: CCACCTTCCCCCACGGCTCAAGAGAAGATGCTTTTC...CCCACGGCTCAAGAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTCTGCTCTCCAACTCTaGGCCTCCAGTGATCCTCCT +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLSALQL*ASSDPP
Trigger: AGGAGGATCACTGGAGGCCAAGAGTTGGAGAGCAGA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 90 bp TCTTCTGCCATGAGGGGGCAGCTATCAGCATCAGTATCTTCCACCTaGACTTCTGGGTGCTGTTTCGTGGCAGGCACTCCTGAACTGGCA +
Preference number: 5 (lower is better)
Translates to: SSAMRGQLSASVSST*TSGCCFVAGTPELA
Trigger: TGCCAGTTCAGGAGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAAGATACTGATGCTGATAGCTGCCCCCTCATGGCAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 90 bp GAGGAGCCAGCAATCCTTCCTGCTTCTAATCAGATTGAGGAGATGTaGAGGGAATGGCAGAAGCATCCCCAGGGAGGCCAGGTGGAACCA +
Preference number: 5 (lower is better)
Translates to: EEPAILPASNQIEEM*REWQKHPQGGQVEP
Trigger: TGGTTCCACCTGGCCTCCCTGGGGATGCTTCTGCCATTCCCTGCACATCTCCTCAATCTGATTAGAAGCAGGAAGGATTGCTGGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS GCA 90 bp TCTTCTGCCATGAGGGGGCAGCTATCAGCATCAGTATCTTCCACCTaGACTTCTGGGTGCTGTTTCGTGGCAGGCACTAGTTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: SSAMRGQLSASVSST*TSGCCFVAGTSWRM
Trigger: CATCCGCCAACTAGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAAGATACTGATGCTGATAGCTGCCCCCTCATGGCAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS CCA 90 bp AGCTTTGTTCTCTTCTTCATAAGCTGGAACCACCTCTGTACCCTGTaGGCTGGTACTGACATCCTGGTGGGCATCCTCCCAGGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SFVLFFISWNHLCTL*AGTDILVGILPGRF
Trigger: GAACCGCCCTGGGAGGATGCCCACCAGGATGTCAGTACCAGCCCACAGGGTACAGAGGTGGTTCCAGCTTATGAAGAAGAGAACAAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGGCTCTGGGGCTTTCTaGGCTGGGGAGGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LSNDSESSGTRTLDATCRGSGAF*AGEGLG
Trigger: CCCCAAGCCCTCCCCAGCCAAGAAAGCCCCAGAGCC...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGGGGCGGTGTTTGAACTaGCAGCAGAGCATGTCGCAA +
Preference number: 5 (lower is better)
Translates to: SESSGTRTLDATCRAQAQGRCLN*QQSMSQ
Trigger: TTGCGACATGCTCTGCTGCAAGTTCAAACACCGCCC...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCAGGACATACATCAGGTaGGTCAGCGGGTCAATGCTC +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLRTYIR*VSGSML
Trigger: GAGCATTGACCCGCTGACCAACCTGATGTATGTCCT...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GGTCCTTTATGTTCACTGTTGCAGGTGGAAACAAATGGCCTAATACTAGAATACCCGTGCGCCACCACGTaGGCCGTGCGCCGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: GPLCSLLQVETNGLILEYPCATT*AVRRFP
Trigger: CGGGAACCGGCGCACGGCCAACGTGGTGGCGCACGG...GTATTCTAGTATTAGGCCATTTGTTTCCACCTGCAACAGTGAACATAAAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp GGGACGGTCAGAGCTGCAGCCACTGAGGTCACGACTACGGAAAAGCATCTTCTCTCCTCCTTGGGCTTATaGTTGCTTCTCAGCATGCGC +
Preference number: 5 (lower is better)
Translates to: GTVRAAATEVTTTEKHLLSSLGL*LLLSMR
Trigger: GCGCATGCTGAGAAGCAACAATAAGCCCAAGGAGGA...GAGAAGATGCTTTTCCGTAGTCGTGACCTCAGTGGCTGCAGCTCTGACCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 90 bp GCAATCCTTCCTGCTTCTAATCAGATTGAGGAGATGTGCAGGGAATaGCAGAAGCATCCCCAGGGAGGCCAGGTGGAACCAAAAGGCCTC +
Preference number: 5 (lower is better)
Translates to: AILPASNQIEEMCRE*QKHPQGGQVEPKGL
Trigger: GAGGCCTTTTGGTTCCACCTGGCCTCCCTGGGGATGCTTCTGCCATTCCCTGCACATCTCCTCAATCTGATTAGAAGCAGGAAGGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS-3UTR CAA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGGCCTCAAGGGCCTCATaGGGTTCATCTGTGCACCCT +
Preference number: 5 (lower is better)
Translates to: STARVSKVSNGLIPAGEWASRAS*GSSVHP
Trigger: AGGGTGCACAGATGAACCCAATGAGGCCCTTGAGGC...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGCTGTTCCACCAACTCTaGCTGCTTTGCAGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: STARVSKVSNGLIPAGEWLFHQL*LLCSRL
Trigger: GAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACAG...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TCTACAGCGAGAGTGTCAAAAGTGAGTAACGGACTGATCCCTGCTGGCGAATGGCTCTCCCTTGACGTCTaGCGAGCTCTTGGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: STARVSKVSNGLIPAGEWLSLDV*RALGLF
Trigger: GAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAG...CCATTCGCCAGCAGGGATCAGTCCGTTACTCACTTTTGACACTCTCGCTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS TCA 90 bp GGTCAATGCTCTGGGGAAACTGGTACTTCTTCCAGGGGCGGTGTTTaGACTTGCAGCAGAGCATGTCGCAATAGTGCTCCTCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: GQCSGETGTSSRGGV*TCSRACRNSAPLPL
Trigger: CAGTGGAAGAGGAGCACTATTGCGACATGCTCTGCTGCAAGTTCAAACACCGCCCCTGGAAGAAGTACCAGTTTCCCCAGAGCATTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS TCA 90 bp CATCCAGCATGCCTTGCGAGTGCCAGGTGTACTCGTACCAGGTCTTaGCGCGGTTCTGCACGGACTTGGGGATCTTGTAGAAATTCATGT +
Preference number: 5 (lower is better)
Translates to: HPACLASARCTRTRS*RGSARTWGSCRNSC
Trigger: ACATGAATTTCTACAAGATCCCCAAGTCCGTGCAGAACCGCGTCAAGACCTGGTACGAGTACACCTGGCACTCGCAAGGCATGCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS-3UTR CAA 90 bp TCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGAGGAAAGCTTCCCATGTATaGGAGCCTCATTTTATCCCT +
Preference number: 5 (lower is better)
Translates to: SQDDRQRMLLPGCSSWQRKASHV*EPHFIP
Trigger: AGGGATAAAATGAGGCTCCAATACATGGGAAGCTTT...CCTCTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS GCA 90 bp GCCATCGTAAACCCAGTGAGTGGAGCCGAGGCCCTGATAGGCCGATaGCCAGTAATAAAGACAGGAATTCAAATGCAGGCTGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: AIVNPVSGAEALIGR*PVIKTGIQMQAVEK
Trigger: CTTCTCTACAGCCTGCATTTGAATTCCTGTCTTTATTACTGGGCATCGGCCTATCAGGGCCTCGGCTCCACTCACTGGGTTTACGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS-3UTR CAA 90 bp AGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTCAGGCCCAGTTTCGCATGTCCTTTTaGTCCGTAATGATGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SESSGTRTLDATCRAQAQFRMSF*SVMMSP
Trigger: CGGGGACATCATTACGGACAAAAAGGACATGCGAAA...CTGGGCCTGAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAATAGCGAGGGCAGCGTaGAAGAGCTTTGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LSNDSESSGTRTLDATCRIARAA*KSFGVP
Trigger: GGGCACCCCAAAGCTCTTCAACGCTGCCCTCGCTAT...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGATAAGGGTGTCTGATTaGGCAGGAGACGGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEIRVSD*AGDGGG
Trigger: GCCGCCACCGTCTCCTGCCAAATCAGACACCCTTAT...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTGGCTCTGGGGCTTTCTaGGCTGGGGAGGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFGSGAF*AGEGLG
Trigger: CCCCAAGCCCTCCCCAGCCAAGAAAGCCCCAGAGCC...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCTGAGCAGGTCCATCTaGAAGCGGCGAGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVELSRSI*KRRDFR
Trigger: CCTGAAGTCTCGCCGCTTCAAGATGGACCTGCTCAG...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGACTCATCCAGCATGCCTaGCGAGTGCCAGGTGTACTC +
Preference number: 5 (lower is better)
Translates to: LSNDSESSGTRTLDATCRLIQHA*RVPGVL
Trigger: GAGTACACCTGGCACTCGCAAGGCATGCTGGATGAG...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGCAAGTTTGCCGCCTTTaGCCCCCTTGCCACCCATCT +
Preference number: 5 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVEQVCRL*PPCHPS
Trigger: AGATGGGTGGCAAGGGGGCAAAAGGCGGCAAACTTG...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATCCAACTCTTGCTGCTTaGCAGCCGCCTCCAGCGCGG +
Preference number: 5 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNPTLAA*QPPPAR
Trigger: CCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGG...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GTTTCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGGATAATGGCATTGCATaGGAATTGAATAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: VSQDDRQRMLLPGCSSWQDNGIA*ELNRVW
Trigger: CCAGACTCTATTCAATTCCAATGCAATGCCATTATC...CTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACTCTTCCTCCTGCATCTaGGTCTTCCGAGGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNSSSCI*VFRGVP
Trigger: AGGGACCCCTCGGAAGACCAAGATGCAGGAGGAAGA...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACATAAGGGTGTCTGATTaGGCAGGAGACGGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNIRVSD*AGDGGG
Trigger: GCCGCCACCGTCTCCTGCCAAATCAGACACCCTTAT...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGATTCTCTGTCCGCTCCTaGAAGAGCTTCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSNDSESSGTRTLDATCRFSVRS*KSFTSS
Trigger: GGAGCTGGTGAAGCTCTTCAAGGAGCGGACAGAGAA...TCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACCAAGTTTGCCGCCTTTaGCCCCCTTGCCACCCATCT +
Preference number: 5 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNQVCRL*PPCHPS
Trigger: AGATGGGTGGCAAGGGGGCAAAAGGCGGCAAACTTG...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTCAGGGACTCGAACACTaGATGCAACTTGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLQGLEH*MQLVEL
Trigger: GAGCTCGACAAGTTGCATCAAGTGTTCGAGTCCCTG...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GTTTCTCAGGATGACAGGCAGAGGATGCTCCTACCGGGCTGTTCCTCCTGGCAGTTGTGTACGTTGTTGTaGTTTGCTTTTGTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: VSQDDRQRMLLPGCSSWQLCTLL*FAFVSA
Trigger: AGCAGAAACAAAAGCAAACAACAACAACGTACACAA...CTGCCAGGAGGAACAGCCCGGTAGGAGCATCCTCTGCCTGTCATCCTGAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCTCCTGGAGCCGGTCGTaGATGATGGCGCTATTTGTG +
Preference number: 5 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSSWSRS*MMALFV
Trigger: CACAAATAGCGCCATCATCAACGACCGGCTCCAGGA...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCACGTCTTGCGAGCTCTaGGCCTGTTCCACCAACTCT +
Preference number: 5 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSTSCEL*ACSTNS
Trigger: AGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGT...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp TTTCAGCAAAGCTTCCCATGTATTGGAGCCTCATTTTATCCCTCACCCATGAACTCTGCTCTCCAACTCTaGGCCTCCAGTGATCCTCCT +
Preference number: 5 (lower is better)
Translates to: FQQSFPCIGASFYPSPMNSALQL*ASSDPP
Trigger: AGGAGGATCACTGGAGGCCAAGAGTTGGAGAGCAGA...GTTCATGGGTGAGGGATAAAATGAGGCTCCAATACATGGGAAGCTTTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TGGATGGACAAATACATACAGACATTTGCAAACCTTCAAAGGCCTCTGAGCAGCAGGACATACATCAGGTaGGTCAGCGGGTCAATGCTC +
Preference number: 5 (lower is better)
Translates to: WMDKYIQTFANLQRPLSSRTYIR*VSGSML
Trigger: GAGCATTGACCCGCTGACCAACCTGATGTATGTCCT...GCTGCTCAGAGGCCTTTGAAGGTTTGCAAATGTCTGTATGTATTTGTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATGCCCAAGACCTGCACTaGCCCTGCCTGGATGATGTA +
Preference number: 5 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNAQDLH*PCLDDV
Trigger: TACATCATCCAGGCAGGGCAAGTGCAGGTCTTGGGC...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp TCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTGATGCAACTTGTCGAGACGCTCTTCTCCTCCTaGGGCTTATTGTTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SQMIVRAQGLEHLMQLVETLFSS*GLLLLL
Trigger: GAGAAGCAACAATAAGCCCAAGGAGGAGAAGAGCGT...CTCGACAAGTTGCATCAAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATCTCTCCCTTGACGTCTaGCGAGCTCTTGGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNLSLDV*RALGLF
Trigger: GAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAG...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTGGAAAGCTTTAGGGAATGTAAGTGCTGTCATCAGCTGGGAGATTTCATTTTCGAAAAGCATCTTCTCTaGAGCCGTGGGGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LESFRECKCCHQLGDFIFEKHLL*SRGGRW
Trigger: CCACCTTCCCCCACGGCTCAAGAGAAGATGCTTTTC...GAAAATGAAATCTCCCAGCTGATGACAGCACTTACATTCCCTAAAGCTTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS-3UTR CAA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTTCCTGGAGCCGGTCGTaGATGATGGCGCTATTTGTG +
Preference number: 5 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFSWSRS*MMALFV
Trigger: CACAAATAGCGCCATCATCAACGACCGGCTCCAGGA...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATTCCTTGGGCTTATTGTaGCTTCTCAGCATGCGCCTG +
Preference number: 5 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNSLGLL*LLSMRL
Trigger: CAGGCGCATGCTGAGAAGCAACAATAAGCCCAAGGA...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CAGGAAAAGGTAGGGCTCTCAAATGATAGTGAGAGCTCAGGGACTCGAACACTTAAAGCTTCCCATGTATaGGAGCCTCATTTTATCCCT +
Preference number: 5 (lower is better)
Translates to: QEKVGLSNDSESSGTRTLKASHV*EPHFIP
Trigger: AGGGATAAAATGAGGCTCCAATACATGGGAAGCTTT...AAGTGTTCGAGTCCCTGAGCTCTCACTATCATTTGAGAGCCCTACCTTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp GTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAACACTTTACTTTTCCTTGGGCTTATTGTaGCTTCTCAGCATGCGCCTG +
Preference number: 5 (lower is better)
Translates to: VLDKFLRGNPTHSITLYFSLGLL*LLSMRL
Trigger: CAGGCGCATGCTGAGAAGCAACAATAAGCCCAAGGA...AAAGTAAAGTGTTATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS-3UTR CAA 90 bp CTATCCTTGAAATGTGTTAGACAAATTCCTGAGGGGAAACCCCACACATTCAATAATGGGCAGGACCTATaGGAATTCCAGGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: LSLKCVRQIPEGKPHTFNNGQDL*EFQVLY
Trigger: ATAAAGGACCTGGAATTCCAATAGGTCCTGCCCATT...ATTGAATGTGTGGGGTTTCCCCTCAGGAATTTGTCTAACACATTTCAAGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251102.13
CDS CCA 72 bp CGTCCGGGGCGCGGGTGGGTCGGTGGCGGCCTCCTTTaGGTGCGTGTGCTGGTCTGGGGCGGCGGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: RPGRGWVGGGLL*VRVLVWGGGAF
Trigger: GAAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAAGGAGGCCGCCACCGACCCACCCGCGCCCCGGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 72 bp GCGTCCGGGGCGCGGGTGGGTCGGTGGCGGCCTCCTTaGGGTGCGTGTGCTGGTCTGGGGCGGCGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: ASGARVGRWRPP*GACAGLGRRSL
Trigger: AAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAAGGAGGCCGCCACCGACCCACCCGCGCCCCGGACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp GGCTCCGGGCCCGGGCTCATGCAGATCCTCACCGAGTaGTCTTCGGGCTCGGCCGGCCCCTCCTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GSGPGLMQILTE*SSGSAGPSSSP
Trigger: GGGAGAGGAGGAGGGGCCGGCCGAGCCCGAAGAGCACTCGGTGAGGATCTGCATGAGCCCGGGCCCGGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp GCGGGTGGGTCGGTGGCGGCCTCCTTTGGGTGCGTGTaGTGGTCTGGGGCGGCGGAGCCTTCCTCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: AGGSVAASFGCV*WSGAAEPSSPL
Trigger: CAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAAGGAGGCCGCCACCGACCCACCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp GGTGGGTCGGTGGCGGCCTCCTTTGGGTGCGTGTGCTaGTCTGGGGCGGCGGAGCCTTCCTCTCCCTTGACG +
Preference number: 6 (lower is better)
Translates to: GGSVAASFGCVC*SGAAEPSSPLT
Trigger: CGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAAGGAGGCCGCCACCGACCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000565942.1
CDS GCA 72 bp ACAGGATCTGCTCTCCCGGCTCCGGGCCCGGGCTCATaGAGATCCTCACCGAGTGCTCTTCGGGCTCGGCCG +
Preference number: 6 (lower is better)
Translates to: TGSALPAPGPGS*RSSPSALRARP
Trigger: CGGCCGAGCCCGAAGAGCACTCGGTGAGGATCTGCATGAGCCCGGGCCCGGAGCCGGGAGAGCAGATCCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp CTGGGGGCTGTGGCGTTCATCCCAAGCCTGGGTCGGTaGATGCAAGTGGGAGCCCAGCTCCCGAGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: LGAVAFIPSLGR*MQVGAQLPSQG
Trigger: ACCCTGGCTCGGGAGCTGGGCTCCCACTTGCATGCACCGACCCAGGCTTGGGATGAACGCCACAGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS TCA 72 bp GCTGCTTTGCAGCCGCCTCCAGCGCGGCCAGTTCTTTaGGCCGGGCCCGGAGGTGAGCAAGTTTGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: AALQPPPARPVL*AGPGGEQVCRL
Trigger: AAGGCGGCAAACTTGCTCACCTCCGGGCCCGGCTCAAAGAACTGGCCGCGCTGGAGGCGGCTGCAAAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp CCGCACGGTCCTGGCCATCAGTGTCCTTCGGGGTGGTaGGGTCAGACCAGGCAACCACTGGGGACTCTGCTG +
Preference number: 6 (lower is better)
Translates to: PHGPGHQCPSGW*GQTRQPLGTLL
Trigger: CAGCAGAGTCCCCAGTGGTTGCCTGGTCTGACCCCACCACCCCGAAGGACACTGATGGCCAGGACCGTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp TGGCGTTCATCCCAAGCCTGGGTCGGTGCATGCAAGTaGGAGCCCAGCTCCCGAGCCAGGGTGGCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: WRSSQAWVGACK*EPSSRARVAPV
Trigger: CACTGGAGCCACCCTGGCTCGGGAGCTGGGCTCCCACTTGCATGCACCGACCCAGGCTTGGGATGAACGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS CAA 72 bp AGGATGAAGAGGTTGGTAAACCCGTGCGCCACCACGTaGGCCGTGCGCCGGTTCCCGCCCCCAACAGCCAGC +
Preference number: 6 (lower is better)
Translates to: RMKRLVNPCATT*AVRRFPPPTAS
Trigger: GCTGGCTGTTGGGGGCGGGAACCGGCGCACGGCCAACGTGGTGGCGCACGGGTTTACCAACCTCTTCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000565942.1
CDS TCA 72 bp TCCTGCATCTTGGTCTTCCGAGGGGTCCCTGGGGGCTaGGGCAGCACCCTCTGGACCCAGCCCAACATCCTG +
Preference number: 6 (lower is better)
Translates to: SCILVFRGVPGG*GSTLWTQPNIL
Trigger: CAGGATGTTGGGCTGGGTCCAGAGGGTGCTGCCTCAGCCCCCAGGGACCCCTCGGAAGACCAAGATGCAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000251102.13
ENST00000311183.8
ENST00000562761.1
ENST00000564448.5
ENST00000567568.1
CDS GCA 72 bp TCCTCCCTTTCCTCCGGCATCTTCACCGACAGGATCTaGTCTCCCGGCTCCGGGCCCGGGCTCATGCAGATC +
Preference number: 6 (lower is better)
Translates to: SSLSSGIFTDRI*SPGSGPGLMQI
Trigger: GATCTGCATGAGCCCGGGCCCGGAGCCGGGAGAGCAGATCCTGTCGGTGAAGATGCCGGAGGAAAGGGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp GAAGTGCTCTGGGGCCGGGTCCCGTCTTCTTCACTCTaGCCCACGCCCACCTGCGACACCACACAGCTATCC +
Preference number: 6 (lower is better)
Translates to: EVLWGRVPSSSL*PTPTCDTTQLS
Trigger: GGATAGCTGTGTGGTGTCGCAGGTGGGCGTGGGCCAGAGTGAAGAAGACGGGACCCGGCCCCAGAGCACTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000564654.1
CDS CCA 72 bp CTCGGCTTCAGCGGGCTTTGTGTCTGGAGCTGGCTCTaGGGCTTTCTTGGCTGGGGAGGGCTTGGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: LGFSGLCVWSWL*GFLGWGGLGAL
Trigger: GAGAGCCCCAAGCCCTCCCCAGCCAAGAAAGCCCCAGAGCCAGCTCCAGACACAAAGCCCGCTGAAGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp CACTGGCTCGGCTTCAGCGGGCTTTGTGTCTGGAGCTaGCTCTGGGGCTTTCTTGGCTGGGGAGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: HWLGFSGLCVWS*LWGFLGWGGLG
Trigger: CCCAAGCCCTCCCCAGCCAAGAAAGCCCCAGAGCCAGCTCCAGACACAAAGCCCGCTGAAGCCGAGCCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp CTCTTCCACTGGCTCGGCTTCAGCGGGCTTTGTGTCTaGAGCTGGCTCTGGGGCTTTCTTGGCTGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: LFHWLGFSGLCV*SWLWGFLGWGG
Trigger: CCCTCCCCAGCCAAGAAAGCCCCAGAGCCAGCTCCAGACACAAAGCCCGCTGAAGCCGAGCCAGTGGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp GGCAGCGTTGAAGAGCTTTGGGGTGCCCGCCCGGGGTaGAAGGATCAGCACGCTCTTCTCCTCCTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: GSVEELWGARPG*KDQHALLLLGL
Trigger: AAGCCCAAGGAGGAGAAGAGCGTGCTGATCCTTCCACCCCGGGCGGGCACCCCAAAGCTCTTCAACGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 72 bp GTGTGCTGGTCTGGGGCGGCGGAGCCTTCCTCTCCCTaGACGTCTTGCGAGCTCTTGGCCTGTTCCACCAAC +
Preference number: 6 (lower is better)
Translates to: VCWSGAAEPSSP*TSCELLACSTN
Trigger: GTTGGTGGAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 90 bp TTTGGGTGCGTGTGCTGGTCTGGGGCGGCGGAGCCTTCCTCTCCCTaGACGTCTTGCGAGCTCTTGGCCTGTTCCACCAACTCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: FGCVCWSGAAEPSSP*TSCELLACSTNSCC
Trigger: GCAGCAAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS TCA 72 bp TGTGCTGGTCTGGGGCGGCGGAGCCTTCCTCTCCCTTaGCGTCTTGCGAGCTCTTGGCCTGTTCCACCAACT +
Preference number: 6 (lower is better)
Translates to: CAGLGRRSLPLP*RLASSWPVPPT
Trigger: AGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp TCCTTCTTATCCAGGATGAAGAGGTTGGTAAACCCGTaGGCCACCACGTTGGCCGTGCGCCGGTTCCCGCCC +
Preference number: 6 (lower is better)
Translates to: SFLSRMKRLVNP*ATTLAVRRFPP
Trigger: GGGCGGGAACCGGCGCACGGCCAACGTGGTGGCGCACGGGTTTACCAACCTCTTCATCCTGGATAAGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000565942.1
CDS GCA 72 bp CGAGCTCTTGGCCTGTTCCACCAACTCTTGCTGCTTTaGAGCCGCCTCCAGCGCGGCCAGTTCTTTGAGCCG +
Preference number: 6 (lower is better)
Translates to: RALGLFHQLLLL*SRLQRGQFFEP
Trigger: CGGCTCAAAGAACTGGCCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACAGGCCAAGAGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp CTTTCCTGTCATAGCGAGGGCAGCGTTGAAGAGCTTTaGGGTGCCCGCCCGGGGTGGAAGGATCAGCACGCT +
Preference number: 6 (lower is better)
Translates to: LSCHSEGSVEEL*GARPGWKDQHA
Trigger: AGCGTGCTGATCCTTCCACCCCGGGCGGGCACCCCAAAGCTCTTCAACGCTGCCCTCGCTATGACAGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 72 bp TTGCCACCCATCTTTCCTGTCATAGCGAGGGCAGCGTaGAAGAGCTTTGGGGTGCCCGCCCGGGGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: LPPIFPVIARAA*KSFGVPARGGR
Trigger: CCTTCCACCCCGGGCGGGCACCCCAAAGCTCTTCAACGCTGCCCTCGCTATGACAGGAAAGATGGGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 72 bp GACGTCTTGCGAGCTCTTGGCCTGTTCCACCAACTCTaGCTGCTTTGCAGCCGCCTCCAGCGCGGCCAGTTC +
Preference number: 6 (lower is better)
Translates to: DVLRALGLFHQL*LLCSRLQRGQF
Trigger: GAACTGGCCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 72 bp GTCTGGGGCGGCGGAGCCTTCCTCTCCCTTGACGTCTaGCGAGCTCTTGGCCTGTTCCACCAACTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: VWGGGAFLSLDV*RALGLFHQLLL
Trigger: CAGCAAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 90 bp TTTGGGTGCGTGTGCTGGTCTGGGGCGGCGGAGCCTTCCTCTCCCTaGACGTCTTGCGAGCTCTTGGCCTGGCTTTCTTCCGGAGTAACT +
Preference number: 6 (lower is better)
Translates to: FGCVCWSGAAEPSSP*TSCELLAWLSSGVT
Trigger: AGTTACTCCGGAAGAAAGCCAGGCCAAGAGCTCGCAAGACGTCAAGGGAGAGGAAGGCTCCGCCGCCCCAGACCAGCACACGCACCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565942.1
CDS GCA 72 bp CCTCCCCAACTTCCTCCCACAGCTTCTGATCTGAAGTaGTCTGGGGCCGGGTCCCGTCTTCTTCACTCTGGC +
Preference number: 6 (lower is better)
Translates to: PPQLPPTASDLK*SGAGSRLLHSG
Trigger: GCCAGAGTGAAGAAGACGGGACCCGGCCCCAGAGCACTTCAGATCAGAAGCTGTGGGAGGAAGTTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000564654.1
CDS GCA 72 bp ACGTCTTGCGAGCTCTTGGCCTGTTCCACCAACTCTTaGTGCTTTGCAGCCGCCTCCAGCGCGGCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: TSCELLACSTNS*CFAAASSAASS
Trigger: AGAACTGGCCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 72 bp GCAGGCACTAGTTGGCGGATGGAGCTCCTGGTCTCCTaGGCGAAGCTGGAGTTGGACAAGCTGGTTCTCCGG +
Preference number: 6 (lower is better)
Translates to: AGTSWRMELLVS*AKLELDKLVLR
Trigger: CCGGAGAACCAGCTTGTCCAACTCCAGCTTCGCCAAGGAGACCAGGAGCTCCATCCGCCAACTAGTGCCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS CAA 90 bp TGTTTCGTGGCAGGCACTAGTTGGCGGATGGAGCTCCTGGTCTCCTaGGCGAAGCTGGAGTTGGACAAGCTGGTTCTCCGGGAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: CFVAGTSWRMELLVS*AKLELDKLVLREVR
Trigger: CCTCACCTCCCGGAGAACCAGCTTGTCCAACTCCAGCTTCGCCAAGGAGACCAGGAGCTCCATCCGCCAACTAGTGCCTGCCACGAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS TCA 72 bp AAGCTGGAACCACCTCTGTACCCTGTGGGCTGGTACTaGCATCCTGGTGGGCATCCTCCCAGGGCGGTTCAA +
Preference number: 6 (lower is better)
Translates to: KLEPPLYPVGWY*HPGGHPPRAVQ
Trigger: TTGAACCGCCCTGGGAGGATGCCCACCAGGATGTCAGTACCAGCCCACAGGGTACAGAGGTGGTTCCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp TCTTGCGAGCTCTTGGCCTGTTCCACCAACTCTTGCTaGTTTGCAGCCGCCTCCAGCGCGGCCAGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: SCELLACSTNSC*FAAASSAASSL
Trigger: CAAAGAACTGGCCGCGCTGGAGGCGGCTGCAAAGCAGCAAGAGTTGGTGGAACAGGCCAAGAGCTCGCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp CGGCCTCCTCCTTGGCCTTCTCTTCAGCCTCCTTCTTaGCCTCCTCCCCAACTTCCTCCCACAGCTTCTGAT +
Preference number: 6 (lower is better)
Translates to: RPPPWPSLQPPS*PPPQLPPTASD
Trigger: ATCAGAAGCTGTGGGAGGAAGTTGGGGAGGAGGCCAAGAAGGAGGCTGAAGAGAAGGCCAAGGAGGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000564654.1
CDS CCA 72 bp CAGTATCTTCCACCTGCACTTCTGGGTGCTGTTTCGTaGCAGGCACTCCTGAACTGGCAGCCTCGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: QYLPPALLGAVS*QALLNWQPRPQ
Trigger: CTGAGGCCGAGGCTGCCAGTTCAGGAGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAAGATACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp GTTTCGTGGCAGGCACTAGTTGGCGGATGGAGCTCCTaGTCTCCTTGGCGAAGCTGGAGTTGGACAAGCTGG +
Preference number: 6 (lower is better)
Translates to: VSWQALVGGWSS*SPWRSWSWTSW
Trigger: CCAGCTTGTCCAACTCCAGCTTCGCCAAGGAGACCAGGAGCTCCATCCGCCAACTAGTGCCTGCCACGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS CAA 72 bp GCCCGGGGTGGAAGGATCAGCACGCTCTTCTCCTCCTaGGGCTTATTGTTGCTTCTCAGCATGCGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: ARGGRISTLFSS*GLLLLLSMRLA
Trigger: AGCCAGGCGCATGCTGAGAAGCAACAATAAGCCCAAGGAGGAGAAGAGCGTGCTGATCCTTCCACCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 90 bp GGGTCAGACCAGGCAACCACTGGGGACTCTGCTGGTGACAACGCCTaGAGCTCTTCAGCCTCATCATCCTCAGAGGGCAGCTTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: GSDQATTGDSAGDNA*SSSASSSSEGSFFL
Trigger: CAGGAAGAAGCTGCCCTCTGAGGATGATGAGGCTGAAGAGCTCAAGGCGTTGTCACCAGCAGAGTCCCCAGTGGTTGCCTGGTCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 90 bp TTCTTATCCAGGATGAAGAGGTTGGTAAACCCGTGCGCCACCACGTaGGCCGTGCGCCGGTTCCCGCCCCCAACAGCCAGCAAGCTTATT +
Preference number: 6 (lower is better)
Translates to: FLSRMKRLVNPCATT*AVRRFPPPTASKLI
Trigger: AATAAGCTTGCTGGCTGTTGGGGGCGGGAACCGGCGCACGGCCAACGTGGTGGCGCACGGGTTTACCAACCTCTTCATCCTGGATAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000565942.1
CDS CAA 90 bp GGGTCAGACCAGGCAACCACTGGGGACTCTGCTGGTGACAACGCCTaGAGCTCTTCAGCCTCATCATCCTCAGAGGGCAGCTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: GSDQATTGDSAGDNA*SSSASSSSEGSFFL
Trigger: GAGGAAGAAGCTGCCCTCTGAGGATGATGAGGCTGAAGAGCTCAAGGCGTTGTCACCAGCAGAGTCCCCAGTGGTTGCCTGGTCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564450.1
CDS CAA 90 bp CTGTGTGTCCCCGAGGCTGAGCTTGGGACTATAAGGGTGTCTGATTaGGCAGGAGACGGTGGCGGCAACACGGTTGAGGGTGGATTCTCT +
Preference number: 6 (lower is better)
Translates to: LCVPEAELGTIRVSD*AGDGGGNTVEGGFS
Trigger: AGAGAATCCACCCTCAACCGTGTTGCCGCCACCGTCTCCTGCCAAATCAGACACCCTTATAGTCCCAAGCTCAGCCTCGGGGACACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS TCA 72 bp GAACAGGCTGCGGGATCACCTTCTCTACGCCCTTCATaGGCCAGGTCAGTACCCTGCGGCTGGGACTATTCA +
Preference number: 6 (lower is better)
Translates to: EQAAGSPSLRPS*ARSVPCGWDYS
Trigger: TGAATAGTCCCAGCCGCAGGGTACTGACCTGGCTCATGAAGGGCGTAGAGAAGGTGATCCCGCAGCCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251102.13
ENST00000311183.8
ENST00000562761.1
ENST00000564448.5
CDS GCA 72 bp AGAAATTCATGTACTTCACCGTGCTGTCCATGCAGCTaGGGTAGTAGGTCTGTCCGGCGGTGGCGGCCCCTA +
Preference number: 6 (lower is better)
Translates to: RNSCTSPCCPCS*GSRSVRRWRPL
Trigger: TAGGGGCCGCCACCGCCGGACAGACCTACTACCGCAGCTGCATGGACAGCACGGTGAAGTACATGAATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS GCA 72 bp ACCAGCACAGATTTCCCATCAGGGCCGCCCAAGACCTaGACTTGCCCTGCCTGGATGATGTACATCTCACGG +
Preference number: 6 (lower is better)
Translates to: TSTDFPSGPPKT*TCPAWMMYISR
Trigger: CCGTGAGATGTACATCATCCAGGCAGGGCAAGTGCAGGTCTTGGGCGGCCCTGATGGGAAATCTGTGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000565942.1
CDS CCA 72 bp CGGCTGGGACTATTCATTTCAGAAATCTCAGCGCCCTaGGCCCGGAGGGATATGGTGGAAGTAAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: RLGLFISEISAP*ARRDMVEVRAA
Trigger: GGCTGCCCTTACTTCCACCATATCCCTCCGGGCCCAGGGCGCTGAGATTTCTGAAATGAATAGTCCCAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251102.13
ENST00000311183.8
ENST00000562761.1
ENST00000564448.5
CDS CAA 90 bp TGCACCAAAATCTCATTCAGGTCCTTCTTATCCAGGATGAAGAGGTaGGTAAACCCGTGCGCCACCACGTTGGCCGTGCGCCGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: CTKISFRSFLSRMKR*VNPCATTLAVRRFP
Trigger: CGGGAACCGGCGCACGGCCAACGTGGTGGCGCACGGGTTTACCAACCTCTTCATCCTGGATAAGAAGGACCTGAATGAGATTTTGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000565942.1
CDS CAA 90 bp CTCCAGTGGCAGAGGAGCCAGCAATCCTTCCTGCTTCTAATCAGATaGAGGAGATGTGCAGGGAATGGCAGAAGCATCCCCAGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: LQWQRSQQSFLLLIR*RRCAGNGRSIPREA
Trigger: GGCCTCCCTGGGGATGCTTCTGCCATTCCCTGCACATCTCCTCAATCTGATTAGAAGCAGGAAGGATTGCTGGCTCCTCTGCCACTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS TCA 72 bp TGCCTTGCGAGTGCCAGGTGTACTCGTACCAGGTCTTaGCGCGGTTCTGCACGGACTTGGGGATCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: CLASARCTRTRS*RGSARTWGSCR
Trigger: TCTACAAGATCCCCAAGTCCGTGCAGAACCGCGTCAAGACCTGGTACGAGTACACCTGGCACTCGCAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS GCA 72 bp ACCATCAGCTCTGACTCATCCAGCATGCCTTGCGAGTaGCAGGTGTACTCGTACCAGGTCTTGACGCGGTTC +
Preference number: 6 (lower is better)
Translates to: TISSDSSSMPCE*QVYSYQVLTRF
Trigger: GAACCGCGTCAAGACCTGGTACGAGTACACCTGGCACTCGCAAGGCATGCTGGATGAGTCAGAGCTGATGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS GCA 72 bp CTATCAGCATCAGTATCTTCCACCTGCACTTCTGGGTaGTGTTTCGTGGCAGGCACTCCTGAACTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: LSASVSSTCTSG*CFVAGTPELAA
Trigger: GGCTGCCAGTTCAGGAGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAAGATACTGATGCTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp GCCATAGGACATACATCAGGTTGGTCAGCGGGTCAATaGTCTGGGGAAACTGGTACTTCTTCCAGGGGCGGT +
Preference number: 6 (lower is better)
Translates to: AIGHTSGWSAGQ*SGETGTSSRGG
Trigger: ACCGCCCCTGGAAGAAGTACCAGTTTCCCCAGAGCATTGACCCGCTGACCAACCTGATGTATGTCCTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp TCTTGTAGAAATTCATGTACTTCACCGTGCTGTCCATaGAGCTGCGGTAGTAGGTCTGTCCGGCGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: SCRNSCTSPCCP*SCGSRSVRRWR
Trigger: CCGCCACCGCCGGACAGACCTACTACCGCAGCTGCATGGACAGCACGGTGAAGTACATGAATTTCTACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS CCA 72 bp TTCTCTGTCCGCTCCTTGAAGAGCTTCACCAGCTCCTaGAGCCGGTCGTTGATGATGGCGCTATTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: FSVRSLKSFTSS*SRSLMMALFVL
Trigger: CAGCACAAATAGCGCCATCATCAACGACCGGCTCCAGGAGCTGGTGAAGCTCTTCAAGGAGCGGACAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp GTGCAGTACCTATTCATTTCAGAAATCTCAGCGCCCTaGGCCCGGAGGGATATGGTGGAAGTAAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: VQYLFISEISAP*ARRDMVEVRAA
Trigger: GGCTGCCCTTACTTCCACCATATCCCTCCGGGCCCAGGGCGCTGAGATTTCTGAAATGAATAGGTACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567568.1
CDS CAA 72 bp ATCTCATTCAGGTCCTTCTTATCCAGGATGAAGAGGTaGGTAAACCCGTGCGCCACCACGTTGGCCGTGCGC +
Preference number: 6 (lower is better)
Translates to: ISFRSFLSRMKR*VNPCATTLAVR
Trigger: GCGCACGGCCAACGTGGTGGCGCACGGGTTTACCAACCTCTTCATCCTGGATAAGAAGGACCTGAATGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000565942.1
CDS CAA 72 bp GGAAGGATCAGCACGCTCTTCTCCTCCTTGGGCTTATaGTTGCTTCTCAGCATGCGCCTGGCTTTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: GRISTLFSSLGL*LLLSMRLAFFR
Trigger: CCGGAAGAAAGCCAGGCGCATGCTGAGAAGCAACAATAAGCCCAAGGAGGAGAAGAGCGTGCTGATCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 90 bp ACGTCAGGGTCAATGAGTTTCTCCTTCACTTTCTCTGTCCGCTCCTaGAAGAGCTTCACCAGCTCCTGGAGCCGGTCGTTGATGATGGCG +
Preference number: 6 (lower is better)
Translates to: TSGSMSFSFTFSVRS*KSFTSSWSRSLMMA
Trigger: CGCCATCATCAACGACCGGCTCCAGGAGCTGGTGAAGCTCTTCAAGGAGCGGACAGAGAAAGTGAAGGAGAAACTCATTGACCCTGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS TCA 72 bp ATCTGGTCCTGGACTAGGCAATTCAGCTCCATGTTCTaGCATGGTGTAGCCATGGTGCTGGGGCCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: IWSWTRQFSSMF*HGVAMVLGPES
Trigger: ACTCTCTGGCCCCAGCACCATGGCTACACCATGTCAGAACATGGAGCTGAATTGCCTAGTCCAGGACCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS GCA 72 bp GGATCAGCACGCTCTTCTCCTCCTTGGGCTTATTGTTaGTTCTCAGCATGCGCCTGGCTTTCTTCCGGAGTA +
Preference number: 6 (lower is better)
Translates to: GSARSSPPWAYC*FSACAWLSSGV
Trigger: TACTCCGGAAGAAAGCCAGGCGCATGCTGAGAAGCAACAATAAGCCCAAGGAGGAGAAGAGCGTGCTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp GCAATCCTTCCTGCTTCTAATCAGATTGAGGAGATGTaGAGGGAATGGCAGAAGCATCCCCAGGGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: AILPASNQIEEM*REWQKHPQGGQ
Trigger: CTGGCCTCCCTGGGGATGCTTCTGCCATTCCCTGCACATCTCCTCAATCTGATTAGAAGCAGGAAGGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS GCA 72 bp CTATCAGCATCAGTATCTTCCACCTGCACTTCTGGGTaGTGTTTCGTGGCAGGCACTAGTTGGCGGATGGAG +
Preference number: 6 (lower is better)
Translates to: LSASVSSTCTSG*CFVAGTSWRME
Trigger: CTCCATCCGCCAACTAGTGCCTGCCACGAAACAGCACCCAGAAGTGCAGGTGGAAGATACTGATGCTGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS CCA 72 bp AGGACATACATCAGGTTGGTCAGCGGGTCAATGCTCTaGGGAAACTGGTACTTCTTCCAGGGGCGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: RTYIRLVSGSML*GNWYFFQGRCL
Trigger: CAAACACCGCCCCTGGAAGAAGTACCAGTTTCCCCAGAGCATTGACCCGCTGACCAACCTGATGTATGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CCA 72 bp TATAACTGTTTCCCACGCCATCGTAAACCCAGTGAGTaGAGCCGAGGCCCTGATAGGCCGATGCCCAGTAAT +
Preference number: 6 (lower is better)
Translates to: YNCFPRHRKPSE*SRGPDRPMPSN
Trigger: ATTACTGGGCATCGGCCTATCAGGGCCTCGGCTCCACTCACTGGGTTTACGATGGCGTGGGAAACAGTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS TCA 72 bp TCTGGGGAAACTGGTACTTCTTCCAGGGGCGGTGTTTaGACTTGCAGCAGAGCATGTCGCAATAGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: SGETGTSSRGGV*TCSRACRNSAP
Trigger: AGGAGCACTATTGCGACATGCTCTGCTGCAAGTTCAAACACCGCCCCTGGAAGAAGTACCAGTTTCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp TTTTTGTCCGTAATGATGTCCCCGCCTCTGACAAACTaGAGGCGTGTCTGGAACACGGTGATGTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: FLSVMMSPPLTN*RRVWNTVMSRK
Trigger: CTTCCTGGACATCACCGTGTTCCAGACACGCCTGCAGTTTGTCAGAGGCGGGGACATCATTACGGACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS GCA 72 bp AACCCAGTGAGTGGAGCCGAGGCCCTGATAGGCCGATaGCCAGTAATAAAGACAGGAATTCAAATGCAGGCT +
Preference number: 6 (lower is better)
Translates to: NPVSGAEALIGR*PVIKTGIQMQA
Trigger: AGCCTGCATTTGAATTCCTGTCTTTATTACTGGGCATCGGCCTATCAGGGCCTCGGCTCCACTCACTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS CAA 72 bp TCAATGAGTTTCTCCTTCACTTTCTCTGTCCGCTCCTaGAAGAGCTTCACCAGCTCCTGGAGCCGGTCGTTG +
Preference number: 6 (lower is better)
Translates to: SMSFSFTFSVRS*KSFTSSWSRSL
Trigger: CAACGACCGGCTCCAGGAGCTGGTGAAGCTCTTCAAGGAGCGGACAGAGAAAGTGAAGGAGAAACTCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251102.13
ENST00000564448.5
CDS CAA 72 bp CAGAGGAGCCAGCAATCCTTCCTGCTTCTAATCAGATaGAGGAGATGTGCAGGGAATGGCAGAAGCATCCCC +
Preference number: 6 (lower is better)
Translates to: QRSQQSFLLLIR*RRCAGNGRSIP
Trigger: GGGGATGCTTCTGCCATTCCCTGCACATCTCCTCAATCTGATTAGAAGCAGGAAGGATTGCTGGCTCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564654.1
CDS GCA 72 bp ACTTGGGGATCTTGTAGAAATTCATGTACTTCACCGTaGTGTCCATGCAGCTGCGGTAGTAGGTCTGTCCGG +
Preference number: 6 (lower is better)
Translates to: TWGSCRNSCTSP*CPCSCGSRSVR
Trigger: CCGGACAGACCTACTACCGCAGCTGCATGGACAGCACGGTGAAGTACATGAATTTCTACAAGATCCCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251102.13
ENST00000564448.5
ENST00000569643.1
CDS GCA 72 bp ATCCCGACTTACTGCTCGGAAGCCACTGGCAAAGTCTaGCTTGCGGTAGAAGGTTCTAAAAGCATCCACACT +
Preference number: 6 (lower is better)
Translates to: IPTYCSEATGKV*LAVEGSKSIHT
Trigger: AGTGTGGATGCTTTTAGAACCTTCTACCGCAAGGCAGACTTTGCCAGTGGCTTCCGAGCAGTAAGTCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564450.1