Pregenerated sensors for CNFN (Homo sapiens)
Ensembl gene IDs: ENSG00000105427Ensembl transcript IDs: ENST00000222032.10, ENST00000597255.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCAGAGGCGAGACTGGTaGAAAAGGACGGGGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: RFLLWVYFWQRDRGGEAVQRRDW*KRTGKT Trigger: TGTCTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTG...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR CCA 90 bp | AGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGACGGTAGCAGCTGGTGGTaGCGCACTGGGGCTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: RSGQRRPEARLVEKDGEDGSSWW*RTGADW Trigger: CCAGTCAGCCCCAGTGCGCCACCACCAGCTGCTACC...GTCTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR TCA 90 bp | CCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGGGATCGCGATGGCAGTaGTGGAGGCAGACGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PGVAREGQRRDWWKRTGKGSRWQ*WRQTCG Trigger: TCCACACGTCTGCCTCCATCACTGCCATCGCGATCC...CTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR TCA 90 bp | GGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCGCGGGACAGGGGTGGTaGGGCAGTCCCTCCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GFYCGCISGSGTGVVRQSAGQGW*GSPSQE Trigger: CTCCTGGGAGGGACTGCCTCACCACCCCTGTCCCGC...GGACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR TCA 90 bp | AGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGACCGTTGCAGCAGTCCGTaGGACCTGTGTGCCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RSGQRRPEARLVEKDGEDRCSSP*DLCASH Trigger: GTGACTGGCACACAGGTCTCACGGACTGCTGCAACG...GTCTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR GCA 90 bp | CCCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAATCCGTGAGACCTGTGTaGCAGTCACTGAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PRSGQRRPEARLVEKDGESVRPV*QSLSWV Trigger: GACCCAGCTCAGTGACTGGCACACAGGTCTCACGGA...TTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR GCA 90 bp | GGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCGCTCCCGCATGCCGGTaGGGATGGAGTGCAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GFYCGCISGSGTGVVRQSAPACR*GWSAGL Trigger: GAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGC...GGACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR GCA 90 bp | AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCAGGGCCGCCCAGTCGTaGCCGACGGAGCCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: RFLLWVYFWQRDRGGEAVRAAQS*PTEPWM Trigger: CATCCAGGGCTCCGTCGGGCACGACTGGGCGGCCCT...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR CCA 90 bp | AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCGCATGCCGGTGCGGATaGAGTGCAGGCCTCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RFLLWVYFWQRDRGGEAVACRCG*SAGLRA Trigger: TGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGC...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR CCA 90 bp | CCCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAACAGAGGCGAGACTGGTaGAAAAGGACGGGGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: PRSGQRRPEARLVEKDGEQRRDW*KRTGKT Trigger: TGTCTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTG...TTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR CCA 90 bp | CCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGTTGTGGGTGTATTTCTaGCAGCGGGACAGGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PGVAREGQRRDWWKRTGKLWVYF*QRDRGG Trigger: ACCACCCCTGTCCCGCTGCCAGAAATACACCCACAA...CTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR TCA 90 bp | AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCAGGGCAGACAAAAGGTaGGGGCCGCCCAGTCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RFLLWVYFWQRDRGGEAVRADKR*GPPSRA Trigger: GGCACGACTGGGCGGCCCTCACCTTTTGTCTGCCCT...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR GCA 90 bp | TTCAGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGGTAGCGCTCCCGCATaGCGGTGCGGATGGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FRFLLWVYFWQRDRGGEAGSAPA*RCGWSA Trigger: TGCACTCCATCCGCACCGGCATGCGGGAGCGCTACC...TGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR CCA 90 bp | TTCAGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGGGTCTGGTAGCAGCTaGTGGTGGCGCACTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FRFLLWVYFWQRDRGGEAGSGSS*WWRTGA Trigger: AGCCCCAGTGCGCCACCACCAGCTGCTACCAGACCC...TGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR CCA 90 bp | AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCGGCCAGAGGCGAGACTaGTGGAAAAGGACGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RFLLWVYFWQRDRGGEAVGQRRD*WKRTGK Trigger: CTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCC...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR GCA 90 bp | GGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCACAGAGGAGCAAAAGTaGCGCACAGACAGACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GFYCGCISGSGTGVVRQSTEEQK*RTDRQA Trigger: TGCCTGTCTGTCTGTGCGGCACTTTTGCTCCTCTGT...GGACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR GCA 90 bp | TTCAGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCACAAAGTCGTCGGAGATaGGGCAGGCAAGGCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: FRFLLWVYFWQRDRGGEAQSRRR*GRQGTE Trigger: CTCTGTGCCTTGCCTGCCGCATCTCCGACGACTTTG...TGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR CCA 90 bp | CCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGTTCAGGTTTTTATTGTaGGTGTATTTCTGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PGVAREGQRRDWWKRTGKFRFLL*VYFWQR Trigger: CCGCTGCCAGAAATACACCCACAATAAAAACCTGAA...CTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS GCA 90 bp | CGTGCCCGACGGAGCCCTGGATGTGGTAGCGCTCCCGCATGCCGGTaGGGATGGAGTGCAGGCCTCCGGGCAGGTAGGGCGCGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RARRSPGCGSAPACR*GWSAGLRAGRARSS Trigger: GCTGCTGCGCGCCCTACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGGGCTCCGTCGGGCACG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222032.10 ENST00000597255.1 |
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| CDS CCA 90 bp | CGACGGAGCCCTGGATGTGGTAGCGCTCCCGCATGCCGGTGCGGATaGAGTGCAGGCCTCCGGGCAGGTAGGGCGCGCAGCAGCACTCGC | + |
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Preference number: 5 (lower is better) Translates to: RRSPGCGSAPACRCG*SAGLRAGRARSSTR Trigger: GCGAGTGCTGCTGCGCGCCCTACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGGGCTCCGTCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222032.10 ENST00000597255.1 |
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| CDS GCA 90 bp | CGGGCAGGTAGGGCGCGCAGCAGCACTCGCCAAAGTCGTCGGAGATaGGGCAGGCAAGGCACAGAGGAGCAAAAGTGCCGCACAGACAGA | + |
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Preference number: 5 (lower is better) Translates to: RAGRARSSTRQSRRR*GRQGTEEQKCRTDR Trigger: TCTGTCTGTGCGGCACTTTTGCTCCTCTGTGCCTTGCCTGCCGCATCTCCGACGACTTTGGCGAGTGCTGCTGCGCGCCCTACCTGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222032.10 ENST00000597255.1 |
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| CDS TCA 90 bp | TGCCTTTCACGTTGTCGTGCATCTCAAACTGCATCTTGCTGGCCCTaGGGAGGTGGCGTTGGGGACGGCAGAAGTGGCTGCAGGATCGCG | + |
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Preference number: 5 (lower is better) Translates to: CLSRCRASQTASCWP*GGGVGDGRSGCRIA Trigger: CGCGATCCTGCAGCCACTTCTGCCGTCCCCAACGCCACCTCCTCAGGGCCAGCAAGATGCAGTTTGAGATGCACGACAACGTGAAAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597255.1 |
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| CDS-3UTR CAA 90 bp | AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCAGACAGGCATGTCGTaGCAGCAGTCCGTGAGACCT | + |
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Preference number: 5 (lower is better) Translates to: RFLLWVYFWQRDRGGEAVQTGMS*QQSVRP Trigger: AGGTCTCACGGACTGCTGCAACGACATGCCTGTCTG...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS-3UTR CAA 90 bp | CCCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGTTTTCAGGTTTTTATaGTGGGTGTATTTCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PRSGQRRPEARLVEKDGEVFRFL*WVYFWQ Trigger: CTGCCAGAAATACACCCACAATAAAAACCTGAAAAC...TTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222032.10 |
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| CDS GCA 72 bp | CGGAGCCCTGGATGTGGTAGCGCTCCCGCATGCCGGTaGGGATGGAGTGCAGGCCTCCGGGCAGGTAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RSPGCGSAPACR*GWSAGLRAGRA Trigger: CGCCCTACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGGGCTCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222032.10 ENST00000597255.1 |
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| CDS GCA 72 bp | GCCCGACGGAGCCCTGGATGTGGTAGCGCTCCCGCATaGCGGTGCGGATGGAGTGCAGGCCTCCGGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ARRSPGCGSAPA*RCGWSAGLRAG Trigger: ACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGGGCTCCGTCGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222032.10 ENST00000597255.1 |
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| CDS CCA 72 bp | CCTGGATGTGGTAGCGCTCCCGCATGCCGGTGCGGATaGAGTGCAGGCCTCCGGGCAGGTAGGGCGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PGCGSAPACRCG*SAGLRAGRARS Trigger: GCTGCGCGCCCTACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222032.10 ENST00000597255.1 |
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| CDS GCA 72 bp | AGGGCGCGCAGCAGCACTCGCCAAAGTCGTCGGAGATaGGGCAGGCAAGGCACAGAGGAGCAAAAGTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RARSSTRQSRRR*GRQGTEEQKCR Trigger: GCGGCACTTTTGCTCCTCTGTGCCTTGCCTGCCGCATCTCCGACGACTTTGGCGAGTGCTGCTGCGCGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222032.10 ENST00000597255.1 |
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