RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNFN (Homo sapiens)

Ensembl gene IDs: ENSG00000105427

Ensembl transcript IDs: ENST00000222032.10, ENST00000597255.1

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCAGAGGCGAGACTGGTaGAAAAGGACGGGGAAGACA +
Preference number: 2 (lower is better)
Translates to: RFLLWVYFWQRDRGGEAVQRRDW*KRTGKT
Trigger: TGTCTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTG...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR CCA 90 bp AGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGACGGTAGCAGCTGGTGGTaGCGCACTGGGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: RSGQRRPEARLVEKDGEDGSSWW*RTGADW
Trigger: CCAGTCAGCCCCAGTGCGCCACCACCAGCTGCTACC...GTCTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR TCA 90 bp CCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGGGATCGCGATGGCAGTaGTGGAGGCAGACGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PGVAREGQRRDWWKRTGKGSRWQ*WRQTCG
Trigger: TCCACACGTCTGCCTCCATCACTGCCATCGCGATCC...CTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR TCA 90 bp GGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCGCGGGACAGGGGTGGTaGGGCAGTCCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GFYCGCISGSGTGVVRQSAGQGW*GSPSQE
Trigger: CTCCTGGGAGGGACTGCCTCACCACCCCTGTCCCGC...GGACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR TCA 90 bp AGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGACCGTTGCAGCAGTCCGTaGGACCTGTGTGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RSGQRRPEARLVEKDGEDRCSSP*DLCASH
Trigger: GTGACTGGCACACAGGTCTCACGGACTGCTGCAACG...GTCTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR GCA 90 bp CCCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAATCCGTGAGACCTGTGTaGCAGTCACTGAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PRSGQRRPEARLVEKDGESVRPV*QSLSWV
Trigger: GACCCAGCTCAGTGACTGGCACACAGGTCTCACGGA...TTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR GCA 90 bp GGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCGCTCCCGCATGCCGGTaGGGATGGAGTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GFYCGCISGSGTGVVRQSAPACR*GWSAGL
Trigger: GAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGC...GGACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR GCA 90 bp AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCAGGGCCGCCCAGTCGTaGCCGACGGAGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RFLLWVYFWQRDRGGEAVRAAQS*PTEPWM
Trigger: CATCCAGGGCTCCGTCGGGCACGACTGGGCGGCCCT...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR CCA 90 bp AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCGCATGCCGGTGCGGATaGAGTGCAGGCCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: RFLLWVYFWQRDRGGEAVACRCG*SAGLRA
Trigger: TGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGC...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR CCA 90 bp CCCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAACAGAGGCGAGACTGGTaGAAAAGGACGGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PRSGQRRPEARLVEKDGEQRRDW*KRTGKT
Trigger: TGTCTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTG...TTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR CCA 90 bp CCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGTTGTGGGTGTATTTCTaGCAGCGGGACAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGVAREGQRRDWWKRTGKLWVYF*QRDRGG
Trigger: ACCACCCCTGTCCCGCTGCCAGAAATACACCCACAA...CTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR TCA 90 bp AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCAGGGCAGACAAAAGGTaGGGGCCGCCCAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: RFLLWVYFWQRDRGGEAVRADKR*GPPSRA
Trigger: GGCACGACTGGGCGGCCCTCACCTTTTGTCTGCCCT...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR GCA 90 bp TTCAGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGGTAGCGCTCCCGCATaGCGGTGCGGATGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: FRFLLWVYFWQRDRGGEAGSAPA*RCGWSA
Trigger: TGCACTCCATCCGCACCGGCATGCGGGAGCGCTACC...TGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR CCA 90 bp TTCAGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGGGTCTGGTAGCAGCTaGTGGTGGCGCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FRFLLWVYFWQRDRGGEAGSGSS*WWRTGA
Trigger: AGCCCCAGTGCGCCACCACCAGCTGCTACCAGACCC...TGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR CCA 90 bp AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCGGCCAGAGGCGAGACTaGTGGAAAAGGACGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RFLLWVYFWQRDRGGEAVGQRRD*WKRTGK
Trigger: CTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCC...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR GCA 90 bp GGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCACAGAGGAGCAAAAGTaGCGCACAGACAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: GFYCGCISGSGTGVVRQSTEEQK*RTDRQA
Trigger: TGCCTGTCTGTCTGTGCGGCACTTTTGCTCCTCTGT...GGACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR GCA 90 bp TTCAGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCACAAAGTCGTCGGAGATaGGGCAGGCAAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: FRFLLWVYFWQRDRGGEAQSRRR*GRQGTE
Trigger: CTCTGTGCCTTGCCTGCCGCATCTCCGACGACTTTG...TGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR CCA 90 bp CCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGTTCAGGTTTTTATTGTaGGTGTATTTCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PGVAREGQRRDWWKRTGKFRFLL*VYFWQR
Trigger: CCGCTGCCAGAAATACACCCACAATAAAAACCTGAA...CTTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS GCA 90 bp CGTGCCCGACGGAGCCCTGGATGTGGTAGCGCTCCCGCATGCCGGTaGGGATGGAGTGCAGGCCTCCGGGCAGGTAGGGCGCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RARRSPGCGSAPACR*GWSAGLRAGRARSS
Trigger: GCTGCTGCGCGCCCTACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGGGCTCCGTCGGGCACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222032.10
ENST00000597255.1
CDS CCA 90 bp CGACGGAGCCCTGGATGTGGTAGCGCTCCCGCATGCCGGTGCGGATaGAGTGCAGGCCTCCGGGCAGGTAGGGCGCGCAGCAGCACTCGC +
Preference number: 5 (lower is better)
Translates to: RRSPGCGSAPACRCG*SAGLRAGRARSSTR
Trigger: GCGAGTGCTGCTGCGCGCCCTACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGGGCTCCGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222032.10
ENST00000597255.1
CDS GCA 90 bp CGGGCAGGTAGGGCGCGCAGCAGCACTCGCCAAAGTCGTCGGAGATaGGGCAGGCAAGGCACAGAGGAGCAAAAGTGCCGCACAGACAGA +
Preference number: 5 (lower is better)
Translates to: RAGRARSSTRQSRRR*GRQGTEEQKCRTDR
Trigger: TCTGTCTGTGCGGCACTTTTGCTCCTCTGTGCCTTGCCTGCCGCATCTCCGACGACTTTGGCGAGTGCTGCTGCGCGCCCTACCTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222032.10
ENST00000597255.1
CDS TCA 90 bp TGCCTTTCACGTTGTCGTGCATCTCAAACTGCATCTTGCTGGCCCTaGGGAGGTGGCGTTGGGGACGGCAGAAGTGGCTGCAGGATCGCG +
Preference number: 5 (lower is better)
Translates to: CLSRCRASQTASCWP*GGGVGDGRSGCRIA
Trigger: CGCGATCCTGCAGCCACTTCTGCCGTCCCCAACGCCACCTCCTCAGGGCCAGCAAGATGCAGTTTGAGATGCACGACAACGTGAAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597255.1
CDS-3UTR CAA 90 bp AGGTTTTTATTGTGGGTGTATTTCTGGCAGCGGGACAGGGGTGGTGAGGCAGTCCAGACAGGCATGTCGTaGCAGCAGTCCGTGAGACCT +
Preference number: 5 (lower is better)
Translates to: RFLLWVYFWQRDRGGEAVQTGMS*QQSVRP
Trigger: AGGTCTCACGGACTGCTGCAACGACATGCCTGTCTG...GACTGCCTCACCACCCCTGTCCCGCTGCCAGAAATACACCCACAATAAAAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS-3UTR CAA 90 bp CCCAGGAGTGGCCAGAGAAGGCCAGAGGCGAGACTGGTGGAAAAGGACGGGGAAGTTTTCAGGTTTTTATaGTGGGTGTATTTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PRSGQRRPEARLVEKDGEVFRFL*WVYFWQ
Trigger: CTGCCAGAAATACACCCACAATAAAAACCTGAAAAC...TTCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000222032.10
CDS GCA 72 bp CGGAGCCCTGGATGTGGTAGCGCTCCCGCATGCCGGTaGGGATGGAGTGCAGGCCTCCGGGCAGGTAGGGCG +
Preference number: 6 (lower is better)
Translates to: RSPGCGSAPACR*GWSAGLRAGRA
Trigger: CGCCCTACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGGGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222032.10
ENST00000597255.1
CDS GCA 72 bp GCCCGACGGAGCCCTGGATGTGGTAGCGCTCCCGCATaGCGGTGCGGATGGAGTGCAGGCCTCCGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: ARRSPGCGSAPA*RCGWSAGLRAG
Trigger: ACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGGGCTCCGTCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222032.10
ENST00000597255.1
CDS CCA 72 bp CCTGGATGTGGTAGCGCTCCCGCATGCCGGTGCGGATaGAGTGCAGGCCTCCGGGCAGGTAGGGCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: PGCGSAPACRCG*SAGLRAGRARS
Trigger: GCTGCGCGCCCTACCTGCCCGGAGGCCTGCACTCCATCCGCACCGGCATGCGGGAGCGCTACCACATCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222032.10
ENST00000597255.1
CDS GCA 72 bp AGGGCGCGCAGCAGCACTCGCCAAAGTCGTCGGAGATaGGGCAGGCAAGGCACAGAGGAGCAAAAGTGCCGC +
Preference number: 6 (lower is better)
Translates to: RARSSTRQSRRR*GRQGTEEQKCR
Trigger: GCGGCACTTTTGCTCCTCTGTGCCTTGCCTGCCGCATCTCCGACGACTTTGGCGAGTGCTGCTGCGCGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222032.10
ENST00000597255.1