RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNDP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000150656

Ensembl transcript IDs: ENST00000358821.8, ENST00000582365.1, ENST00000582461.1, ENST00000584004.5, ENST00000584316.5, ENST00000585136.1

Found 473 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAACCTGTGCACAGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTaGTGGGACAGGAAGAAGGAACGGGAGGCAGAGAAGCTGACAAGG +
Preference number: 1 (lower is better)
Translates to: ATCAQMLDRERVGLF*WDRKKEREAEKLTR
Trigger: CCTTGTCAGCTTCTCTGCCTCCCGTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCTGTGCACAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR GCA 90 bp AGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTGGAGTCCGCCCTaGTTTAGTGTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTGG +
Preference number: 1 (lower is better)
Translates to: RERSWSPGSRSWSPP*FSVHLVKGVAENTW
Trigger: CCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR CCA 90 bp TCTGCTCTGGTGCAACCTGTGCACAGATGTTGGATAGAGAGAGAGTaGGCCTTTTCTGATGGGACAGGAAGAAGGAACGGGAGGCAGAGA +
Preference number: 1 (lower is better)
Translates to: SALVQPVHRCWIERE*AFSDGTGRRNGRQR
Trigger: TCTCTGCCTCCCGTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCTGTGCACAGGTTGCACCAGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 90 bp GAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTaGAGTCCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGTGGCT +
Preference number: 1 (lower is better)
Translates to: EVTVRERSWSPGSRS*SPPCFSVHLVKGVA
Trigger: AGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR CCA 90 bp ATTGGCAGCAACTCCATCCAAGAAGTGACTGTCAGAGAAAGGAGTTaGTCACCAGGATCACGCAGCTGGAGTCCGCCCTGCTTTAGTGTT +
Preference number: 1 (lower is better)
Translates to: IGSNSIQEVTVRERS*SPGSRSWSPPCFSV
Trigger: AACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTTGCTGCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR CCA 90 bp GAAGAGCTGGGGAGACCAGTCGTGACCCTGGGTGACAGAAAAACATaGACTCTGAACTCTGGCAATCCAGGGTTGGAATATCCTAGATTC +
Preference number: 1 (lower is better)
Translates to: EELGRPVVTLGDRKT*TLNSGNPGLEYPRF
Trigger: GAATCTAGGATATTCCAACCCTGGATTGCCAGAGTTCAGAGTCCATGTTTTTCTGTCACCCAGGGTCACGACTGGTCTCCCCAGCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 90 bp GCCTTTTCTGATGGGACAGGAAGAAGGAACGGGAGGCAGAGAAGCTaGCAAGGTGGCATCGATCTCAGGAAAGGTAAAGAAGCTTGGAAT +
Preference number: 1 (lower is better)
Translates to: AFSDGTGRRNGRQRS*QGGIDLRKGKEAWN
Trigger: ATTCCAAGCTTCTTTACCTTTCCTGAGATCGATGCCACCTTGTCAGCTTCTCTGCCTCCCGTTCCTTCTTCCTGTCCCATCAGAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR GCA 90 bp CTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATaGCACCAAAGGTTCCTGAGTGAAAATCCTGGTCTCTGCATTTCA +
Preference number: 1 (lower is better)
Translates to: LGREEQPDQPLVHEG*HQRFLSENPGLCIS
Trigger: TGAAATGCAGAGACCAGGATTTTCACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR TCA 90 bp TGCACAGGACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTaGGGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCT +
Preference number: 1 (lower is better)
Translates to: CTGLGEIKLLQAAMT*GRCAVGDLKPFPTS
Trigger: AGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGTCCTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 90 bp GCTATTGCACAGGACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATaGCTTGAGGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAA +
Preference number: 1 (lower is better)
Translates to: AIAQDLGKSSCCKQL*LEEGVQWGTLNHFQ
Trigger: TTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGTCCTGTGCAATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 90 bp ACAAAGCCAGATACATTGCCCTCCTCCAATACAACAAAGTCCCCCTaGTGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCAT +
Preference number: 1 (lower is better)
Translates to: TKPDTLPSSNTTKSP*WACHNVRPTLLGDH
Trigger: ATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCATCAGGGGGACTTTGTTGTATTGGAGGAGGGCAATGTATCTGGCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 90 bp TCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTaGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGG +
Preference number: 1 (lower is better)
Translates to: SIRINSALVQPVHRC*IEREWAFSDGTGRR
Trigger: CCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 90 bp ACTATTCATTCTCCTCCCCTTCTCTCCTGGCAGCAACGTAATAATTaGGACACTGCTGGTCTCAGATTCAGCAGGAATGAAGATCAGCGA +
Preference number: 1 (lower is better)
Translates to: TIHSPPLLSWQQRNN*DTAGLRFSRNEDQR
Trigger: TCGCTGATCTTCATTCCTGCTGAATCTGAGACCAGCAGTGTCTCAATTATTACGTTGCTGCCAGGAGAGAAGGGGAGGAGAATGAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 90 bp AACCAGATCAGCCATTGGTTCATGAAGGATGCCACCAAAGGTTCCTaGGTGAAAATCCTGGTCTCTGCATTTCACCTCCACCATGAAGTA +
Preference number: 1 (lower is better)
Translates to: NQISHWFMKDATKGS*VKILVSAFHLHHEV
Trigger: TACTTCATGGTGGAGGTGAAATGCAGAGACCAGGATTTTCACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR CCA 90 bp TTGCAAGGTTGGAGATATGCTAAAAGGTTTGAAGGAATCCAATCCTaGGGCTATTGCACAGGACTTGGGGAAATCAAGTTGCTGCAAGCA +
Preference number: 1 (lower is better)
Translates to: LQGWRYAKRFEGIQS*GYCTGLGEIKLLQA
Trigger: TGCTTGCAGCAACTTGATTTCCCCAAGTCCTGTGCAATAGCCCCAGGATTGGATTCCTTCAAACCTTTTAGCATATCTCCAACCTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 90 bp TCCGTAAGTGATTGCTGGCTTCCTTTGGCTGATCCACAGGTTATCTaGAATTACAATGTAGTCCACACCAGAGAAGAATCGGTCCTTTTC +
Preference number: 1 (lower is better)
Translates to: SVSDCWLPLADPQVI*NYNVVHTREESVLF
Trigger: GAAAAGGACCGATTCTTCTCTGGTGTGGACTACATTGTAATTTCAGATAACCTGTGGATCAGCCAAAGGAAGCCAGCAATCACTTACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR TCA 90 bp GATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGGAGTaGTTATGCCAATCAAATTGCAAGGTTGGAGATATGCTAAAAGGT +
Preference number: 1 (lower is better)
Translates to: DYVSRALEDLESKLE*LCQSNCKVGDMLKG
Trigger: ACCTTTTAGCATATCTCCAACCTTGCAATTTGATTGGCATAATCACTCCAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 90 bp CCTAGAAAGCAAACTGGAGTGATTATGCCAATCAAATTGCAAGGTTaGAGATATGCTAAAAGGTTTGAAGGAATCCAATCCTGGGGCTAT +
Preference number: 1 (lower is better)
Translates to: PRKQTGVIMPIKLQG*RYAKRFEGIQSWGY
Trigger: ATAGCCCCAGGATTGGATTCCTTCAAACCTTTTAGCATATCTCCAACCTTGCAATTTGATTGGCATAATCACTCCAGTTTGCTTTCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 90 bp AAAATACTCATCTTTGCACAAGGACTCCCAAATGGCATATGGGTATaGATATTGATCATTTCAGCTTCGGAACTTTTCAAGAAGTGGGAA +
Preference number: 1 (lower is better)
Translates to: KILIFAQGLPNGIWV*ILIISASELFKKWE
Trigger: TTCCCACTTCTTGAAAAGTTCCGAAGCTGAAATGATCAATATTCATACCCATATGCCATTTGGGAGTCCTTGTGCAAAGATGAGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 90 bp GGTTCAACAAAATCGAGAAACACCACGAAACTCTGCATAATTAGATaGGCGCAAACTACACTTAATAGCACAAAATATCAAACACCTGCT +
Preference number: 1 (lower is better)
Translates to: GSTKSRNTTKLCIIR*AQTTLNSTKYQTPA
Trigger: AGCAGGTGTTTGATATTTTGTGCTATTAAGTGTAGTTTGCGCTCATCTAATTATGCAGAGTTTCGTGGTGTTTCTCGATTTTGTTGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CAA 90 bp CACCAGGATCACGCAGCTGGAGTCCGCCCTGCTTTAGTGTTCACCTaGTCAAAGGTGTGGCTGAAAACACCTGGGCCGAGAAGAGCAACC +
Preference number: 2 (lower is better)
Translates to: HQDHAAGVRPALVFT*SKVWLKTPGPRRAT
Trigger: GGTTGCTCTTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR TCA 90 bp CACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATGCCACCCCGGGTTCCGTAAGTaGTTGCTGGCTTCCTTTGGC +
Preference number: 2 (lower is better)
Translates to: HLGREEQPDQPLVHEGCHPGFRK*LLASFG
Trigger: GCCAAAGGAAGCCAGCAATCACTTACGGAACCCGGG...GTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR TCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAGGGATGTGGGGGAGGTaGATCTGTCAGTGGATCAGA +
Preference number: 2 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGGMWGR*ICQWIR
Trigger: TCTGATCCACTGACAGATTCACCTCCCCCACATCCC...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAGGTGAACTGAATCACTaGCTGCCTGCTCCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGGELNH*LPAPVL
Trigger: AAGGACTGGAGCAGGCAGGCAGTGATTCAGTTCACC...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp GTGTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTGGGCCGAGAAGAGCAACCTTCACAGGAAGATCTTaGTCCAGGGCTCTGAAGGCG +
Preference number: 2 (lower is better)
Translates to: VFTLSKVWLKTPGPRRATFTGRS*SRALKA
Trigger: CGCCTTCAGAGCCCTGGAGCAAGATCTTCCTGTGAA...GGTTGCTCTTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACGGGAGGCAGAGAAGCTaGCAAGGTGGCATCGATCTC +
Preference number: 2 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNGRQRS*QGGIDL
Trigger: GAGATCGATGCCACCTTGTCAGCTTCTCTGCCTCCC...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAAGTCGTGACCCTGGGTaGCAGAAAAACATGGACTCT +
Preference number: 2 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGSRDPG*QKNMDS
Trigger: AGAGTCCATGTTTTTCTGTCACCCAGGGTCACGACT...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTGGAGTCCGCTGGCTTCCTTTGGCTaGTCCACAGGTTATCTGAAA +
Preference number: 2 (lower is better)
Translates to: EVTVRERSWSPGSRSWSPLASFG*STGYLK
Trigger: TTTCAGATAACCTGTGGATCAGCCAAAGGAAGCCAG...CGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR TCA 90 bp CAACTCCATCCAAGAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGATTTCACCTCCACCATaGAGTAGCTGTTCCCCCGGG +
Preference number: 2 (lower is better)
Translates to: QLHPRSDCQRKELVTRITISPPP*SSCSPG
Trigger: CCCGGGGGAACAGCTACTTCATGGTGGAGGTGAAAT...CGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR GCA 90 bp ACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATGCCACCGGTTCCGTAAGTGATTaGTGGCTTCCTTTGGCTGAT +
Preference number: 2 (lower is better)
Translates to: TWAEKSNQISHWFMKDATGSVSD*WLPLAD
Trigger: ATCAGCCAAAGGAAGCCAGCAATCACTTACGGAACC...GGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACGGGATGTGGGGGAGGTaGATCTGTCAGTGGATCAGA +
Preference number: 2 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNGMWGR*ICQWIR
Trigger: TCTGATCCACTGACAGATTCACCTCCCCCACATCCC...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp CAACTCCATCCAAGAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGTGTCAAAGGTGTGGCTaGAAACACCTGGGCCGAGAA +
Preference number: 2 (lower is better)
Translates to: QLHPRSDCQRKELVTRITCQRCG*KHLGRE
Trigger: TTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACA...CGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR GCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACATCGCCCAGGCTGGAGTaGAGTGGCATGATCCCAGTT +
Preference number: 2 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTSPRLE*SGMIPV
Trigger: AACTGGGATCATGCCACTGCACTCCAGCCTGGGCGA...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GGAGTCCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTCCAAAGGTTCCTGAGTaGAAATCCTGGTCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: GVRPALVFTLSKVWLKTPPKVPE*KSWSLH
Trigger: ATGCAGAGACCAGGATTTTCACTCAGGAACCTTTGG...AGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR CCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAATGGACTCTGAACTCTaGCAATCCAGGGTTGGAATA +
Preference number: 2 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGMDSEL*QSRVGI
Trigger: TATTCCAACCCTGGATTGCCAGAGTTCAGAGTCCAT...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp GTGTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTGGGCCGAGAAGAGCAACCATTGCTGGCTTCCTTTaGCTGATCCACAGGTTATCT +
Preference number: 2 (lower is better)
Translates to: VFTLSKVWLKTPGPRRATIAGFL*LIHRLS
Trigger: AGATAACCTGTGGATCAGCCAAAGGAAGCCAGCAAT...GGTTGCTCTTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR TCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACATGCTGCAAGCAGCTATaGCTTGAGGAAGGTGTGCAG +
Preference number: 2 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTCCKQL*LEEGVQ
Trigger: CTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCA...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp ACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATGCCACCGATCCACAGGTTATCTaGAATTACAATGTAGTCCAC +
Preference number: 2 (lower is better)
Translates to: TWAEKSNQISHWFMKDATDPQVI*NYNVVH
Trigger: GTGGACTACATTGTAATTTCAGATAACCTGTGGATC...GGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR CCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACGAGGAAGGTGTGCAGTaGGGGACCTTAAACCATTTC +
Preference number: 2 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNEEGVQ*GTLNHF
Trigger: GAAATGGTTTAAGGTCCCCCACTGCACACCTTCCTC...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACAATCCTGGGGCTATTaGACAGGACTTGGGGAAATC +
Preference number: 2 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTQSWGY*TGLGEI
Trigger: GATTTCCCCAAGTCCTGTGCAATAGCCCCAGGATTG...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTTGTGTCACGAGCACTTaGGGACCTAGAAAGCAAACT +
Preference number: 2 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSCVTST*GPRKQT
Trigger: AGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACA...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAACAAGCAGCTATGACTTaGGGAAGGTGTGCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEQAAMT*GRCAVG
Trigger: CCCCACTGCACACCTTCCTCAAGTCATAGCTGCTTG...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATGCCCACAACTAGGTTaGGCTCTCAGTTGGGTCCAC +
Preference number: 2 (lower is better)
Translates to: EYNIKPETFPASLFSRKACPQLG*ALSWVH
Trigger: GTGGACCCAACTGAGAGCTCAACCTAGTTGTGGGCA...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTCAGCAACGTAATAATTaGGACACTGCTGGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSQQRNN*DTAGLR
Trigger: TCTGAGACCAGCAGTGTCTCAATTATTACGTTGCTG...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCCAATCCTGGGGCTATTaGACAGGACTTGGGGAAATC +
Preference number: 2 (lower is better)
Translates to: KPETFPASLFSRKASTKLQSWGY*TGLGEI
Trigger: GATTTCCCCAAGTCCTGTGCAATAGCCCCAGGATTG...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGACATTGTAGTCAGTGGTaGAGACCAACATTTTTATTA +
Preference number: 2 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGHCSQW*RPTFLL
Trigger: TAATAAAAATGTTGGTCTCCACCACTGACTACAATG...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCACAGGCTGGAGTGCAGTaGCATGATCCCAGTTCACTG +
Preference number: 2 (lower is better)
Translates to: EYNIKPETFPASLFSRKAQAGVQ*HDPSSL
Trigger: CAGTGAACTGGGATCATGCCACTGCACTCCAGCCTG...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCTGTGTCACGAGCACTTaGGGACCTAGAAAGCAAACT +
Preference number: 2 (lower is better)
Translates to: KPETFPASLFSRKASTKLCVTST*GPRKQT
Trigger: AGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACA...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATGGGAGGCAGAGAAGCTaGCAAGGTGGCATCGATCTC +
Preference number: 2 (lower is better)
Translates to: DSAGMKISEYILLGNFLNGRQRS*QGGIDL
Trigger: GAGATCGATGCCACCTTGTCAGCTTCTCTGCCTCCC...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTTATCAGGATAAATTCTaGTCTGGTGCAACCTGTGCA +
Preference number: 2 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSYQDKF*SGATCA
Trigger: TGCACAGGTTGCACCAGAGCAGAATTTATCCTGATA...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAGGTGAACTGAATCACTaGCTGCCTGCTCCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: EYNIKPETFPASLFSRKAGELNH*LPAPVL
Trigger: AAGGACTGGAGCAGGCAGGCAGTGATTCAGTTCACC...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCTGGATAGAGAGAGAGTaGGCCTTTTCTGATGGGACA +
Preference number: 2 (lower is better)
Translates to: KPETFPASLFSRKASTKLWIERE*AFSDGT
Trigger: TGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCA...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCCCTGTGCACAGATGTTaGATAGAGAGAGAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLPVHRC*IEREWA
Trigger: GGCCCACTCTCTCTCTATCCAACATCTGTGCACAGG...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACAGAAAGCAAACTGGAGTaGTTATGCCAATCAAATTGC +
Preference number: 2 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTESKLE*LCQSNC
Trigger: GCAATTTGATTGGCATAATCACTCCAGTTTGCTTTC...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGATGCCCACAACTAGGTTaGGCTCTCAGTTGGGTCCAC +
Preference number: 2 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGCPQLG*ALSWVH
Trigger: GTGGACCCAACTGAGAGCTCAACCTAGTTGTGGGCA...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAACCGCGCCTGGCCCTCTaGTTTGTTTTTATTTGGAGT +
Preference number: 2 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEPRLAL*FVFIWS
Trigger: ACTCCAAATAAAAACAAAGCAGAGGGCCAGGCGCGG...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAGAGGAAGGTGTGCAGTaGGGGACCTTAAACCATTTC +
Preference number: 2 (lower is better)
Translates to: EYNIKPETFPASLFSRKAEEGVQ*GTLNHF
Trigger: GAAATGGTTTAAGGTCCCCCACTGCACACCTTCCTC...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACAAAGGCGATCATTGGATaGAATGATTATGTGTCACGA +
Preference number: 2 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTKAIIG*NDYVSR
Trigger: TCGTGACACATAATCATTCCATCCAATGATCGCCTT...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACCTGAAAATGAATCCATaGGGAAATCATTGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNLKMNP*GNHCSQ
Trigger: CTGACTACAATGATTTCCCCATGGATTCATTTTCAG...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATCAGGCTGGAGTGCAGTaGCATGATCCCAGTTCACTG +
Preference number: 2 (lower is better)
Translates to: DSAGMKISEYILLGNFLNQAGVQ*HDPSSL
Trigger: CAGTGAACTGGGATCATGCCACTGCACTCCAGCCTG...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAATAGAATTGGAGATGTaGTGGCTTGAAGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: EYNIKPETFPASLFSRKAIELEM*WLEASC
Trigger: GCAGGAGGCTTCAAGCCATCACATCTCCAATTCTAT...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTCTCTGCATAATTAGATaGGCGCAAACTACACTTAAT +
Preference number: 2 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSLCIIR*AQTTLN
Trigger: ATTAAGTGTAGTTTGCGCTCATCTAATTATGCAGAG...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACTTATGCCAATCAAATTaGAAGGTTGGAGATATGCTA +
Preference number: 2 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNLCQSN*KVGDML
Trigger: TAGCATATCTCCAACCTTGCAATTTGATTGGCATAA...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCAGTCCTTATCTACAGTaGCAAATGCATCAGGTAGGT +
Preference number: 2 (lower is better)
Translates to: KPETFPASLFSRKASTKLSPYLQ*QMHQVG
Trigger: ACCTACCTGATGCATTTGGCACTGTAGATAAGGACT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACAATCATTGTAGTCAGTaGTGGAGACCAACATTTTTA +
Preference number: 2 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNNHCSQ*WRPTFL
Trigger: TAAAAATGTTGGTCTCCACCACTGACTACAATGATT...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAGGGCTTAGAATTGGGTaGAAAAACAGGAGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: EYNIKPETFPASLFSRKAGLRIG*KNRREE
Trigger: CTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCC...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTGTTAATATAGTACCATaGCTTAGTAACTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSVNIVP*LSNSSE
Trigger: TTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATCCGCGCCTGGCCCTCTaGTTTGTTTTTATTTGGAGT +
Preference number: 2 (lower is better)
Translates to: DSAGMKISEYILLGNFLNPRLAL*FVFIWS
Trigger: ACTCCAAATAAAAACAAAGCAGAGGGCCAGGCGCGG...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCAAGGCGATCATTGGATaGAATGATTATGTGTCACGA +
Preference number: 2 (lower is better)
Translates to: KPETFPASLFSRKASTKLKAIIG*NDYVSR
Trigger: TCGTGACACATAATCATTCCATCCAATGATCGCCTT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAGATCATTGGATGGAATaGTTATGTGTCACGAGCACT +
Preference number: 2 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEDHWME*LCVTST
Trigger: AGTGCTCGTGACACATAATCATTCCATCCAATGATC...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATGAATCACTGCCTGCCTaGTCCAGTCCTTTTAAAGGT +
Preference number: 2 (lower is better)
Translates to: DSAGMKISEYILLGNFLNESLPA*SSPFKG
Trigger: ACCTTTAAAAGGACTGGAGCAGGCAGGCAGTGATTC...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCATATCAAACACCTGCTaGTGTTCTTTAACGATGACT +
Preference number: 2 (lower is better)
Translates to: KPETFPASLFSRKASTKLISNTC*CSLTMT
Trigger: AGTCATCGTTAAAGAACAGCAGCAGGTGTTTGATAT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAGAAGGAATCCAATCCTaGGGCTATTGCACAGGACTT +
Preference number: 2 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGEGIQS*GYCTGL
Trigger: AAGTCCTGTGCAATAGCCCCAGGATTGGATTCCTTC...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAAGATCATTGGATGGAATaGTTATGTGTCACGAGCACT +
Preference number: 2 (lower is better)
Translates to: VNIVPCLSNSSENESMGKDHWME*LCVTST
Trigger: AGTGCTCGTGACACATAATCATTCCATCCAATGATC...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTTTATGCCAATCAAATTaGAAGGTTGGAGATATGCTA +
Preference number: 2 (lower is better)
Translates to: TVPNASGRFNKIEKHHETLCQSN*KVGDML
Trigger: TAGCATATCTCCAACCTTGCAATTTGATTGGCATAA...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCACATTGTAGTCAGTGGTaGAGACCAACATTTTTATTA +
Preference number: 2 (lower is better)
Translates to: EYNIKPETFPASLFSRKAHCSQW*RPTFLL
Trigger: TAATAAAAATGTTGGTCTCCACCACTGACTACAATG...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATAAAACTTCAATGGGGTaGGAGAAATTCTATCAGGAT +
Preference number: 2 (lower is better)
Translates to: DSAGMKISEYILLGNFLNKTSMG*EKFYQD
Trigger: ATCCTGATAGAATTTCTCTCACCCCATTGAAGTTTT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR GCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATAAAAATACTCATCTTTaGACAAGGACTCCCAAATGG +
Preference number: 2 (lower is better)
Translates to: DSAGMKISEYILLGNFLNKNTHL*TRTPKW
Trigger: CCATTTGGGAGTCCTTGTGCAAAGATGAGTATTTTT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp GTTGGTCACCAGGATCACGCAGCTGGAGTCCGCCCTGCTTTAGTGTTCACCTTGATTCACAGGAAGATCTaGCTCCAGGGCTCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: VGHQDHAAGVRPALVFTLIHRKI*LQGSEG
Trigger: GCCTTCAGAGCCCTGGAGCAAGATCTTCCTGTGAAT...CAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR CCA 72 bp AACTCCATCCAAGAAGTGACTGTCAGAGAAAGGAGTTaGTCACCAGGATCACGCAGCTGGAGTCCGCCCTGC +
Preference number: 3 (lower is better)
Translates to: NSIQEVTVRERS*SPGSRSWSPPC
Trigger: GCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR GCA 72 bp AGTTGGTCACCAGGATCACGCAGCTGGAGTCCGCCCTaGTTTAGTGTTCACCTTGTCAAAGGTGTGGCTGAA +
Preference number: 3 (lower is better)
Translates to: SWSPGSRSWSPP*FSVHLVKGVAE
Trigger: TTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR CCA 72 bp GTCCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGTaGCTGAAAACACCTGGGCCGAGAAGAGCAACCAGA +
Preference number: 3 (lower is better)
Translates to: VRPALVFTLSKV*LKTPGPRRATR
Trigger: TCTGGTTGCTCTTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR CAA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAACCTGTGCACAGATGTaGGATAGAGAGAGAGTGGGC +
Preference number: 3 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGTCAQM*DRERVG
Trigger: GCCCACTCTCTCTCTATCCAACATCTGTGCACAGGT...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAATGCCCACAACTAGGTaGAGCTCTCAGTTGGGTCCA +
Preference number: 3 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGMPTTR*SSQLGP
Trigger: TGGACCCAACTGAGAGCTCAACCTAGTTGTGGGCAT...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 72 bp GTGCAACCTGTGCACAGATGTTGGATAGAGAGAGAGTaGGCCTTTTCTGATGGGACAGGAAGAAGGAACGGG +
Preference number: 3 (lower is better)
Translates to: VQPVHRCWIERE*AFSDGTGRRNG
Trigger: CCCGTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCTGTGCACAGGTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 72 bp GTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTaGAGTCCGCCCTGCTTTAGTGTTCACCTTGTCAAA +
Preference number: 3 (lower is better)
Translates to: VRERSWSPGSRS*SPPCFSVHLVK
Trigger: TTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR CAA 90 bp GCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATGCCACCAAAGGTGATTGCTGGCTTCCTTaGGCTGATCCACAGGTTATC +
Preference number: 3 (lower is better)
Translates to: AEKSNQISHWFMKDATKGDCWLP*ADPQVI
Trigger: GATAACCTGTGGATCAGCCAAAGGAAGCCAGCAATC...ACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR TCA 72 bp CAGGACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATaGCTTGAGGAAGGTGTGCAGTGGGGGACCTTAAAC +
Preference number: 3 (lower is better)
Translates to: QDLGKSSCCKQL*LEEGVQWGTLN
Trigger: GTTTAAGGTCCCCCACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 72 bp GGGAGACCAGTCGTGACCCTGGGTGACAGAAAAACATaGACTCTGAACTCTGGCAATCCAGGGTTGGAATAT +
Preference number: 3 (lower is better)
Translates to: GRPVVTLGDRKT*TLNSGNPGLEY
Trigger: ATATTCCAACCCTGGATTGCCAGAGTTCAGAGTCCATGTTTTTCTGTCACCCAGGGTCACGACTGGTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp CAACTCCATCCAAGAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAACCAGATCAGCCATaGGTTCATGAAGGATGCCAC +
Preference number: 3 (lower is better)
Translates to: QLHPRSDCQRKELVTRITQPDQP*VHEGCH
Trigger: GTGGCATCCTTCATGAACCAATGGCTGATCTGGTTG...CGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR TCA 72 bp GATACATTGCCCTCCTCCAATACAACAAAGTCCCCCTaGTGGGCATGCCACAATGTACGCCCAACTTTACTG +
Preference number: 3 (lower is better)
Translates to: DTLPSSNTTKSP*WACHNVRPTLL
Trigger: CAGTAAAGTTGGGCGTACATTGTGGCATGCCCATCAGGGGGACTTTGTTGTATTGGAGGAGGGCAATGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAGATATGCTAAAAGGTTaGAAGGAATCCAATCCTGGG +
Preference number: 3 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGDMLKG*KESNPG
Trigger: CCCAGGATTGGATTCCTTCAAACCTTTTAGCATATC...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp GTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTGGAGTCCGCCCTGCTTTCCCTCAATGATGAATTaGATATTCACAGGAAGATCT +
Preference number: 3 (lower is better)
Translates to: VRERSWSPGSRSWSPPCFPSMMN*IFTGRS
Trigger: AGATCTTCCTGTGAATATCAAATTCATCATTGAGGG...AAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR TCA 72 bp CTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTaGGGAAGGTGTGCAGTGGGGGACCTTAAACCATTT +
Preference number: 3 (lower is better)
Translates to: LGEIKLLQAAMT*GRCAVGDLKPF
Trigger: AAATGGTTTAAGGTCCCCCACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 72 bp TCTCCTCCCCTTCTCTCCTGGCAGCAACGTAATAATTaGGACACTGCTGGTCTCAGATTCAGCAGGAATGAA +
Preference number: 3 (lower is better)
Translates to: SPPLLSWQQRNN*DTAGLRFSRNE
Trigger: TTCATTCCTGCTGAATCTGAGACCAGCAGTGTCTCAATTATTACGTTGCTGCCAGGAGAGAAGGGGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 72 bp AGCCATTGGTTCATGAAGGATGCCACCAAAGGTTCCTaGGTGAAAATCCTGGTCTCTGCATTTCACCTCCAC +
Preference number: 3 (lower is better)
Translates to: SHWFMKDATKGS*VKILVSAFHLH
Trigger: GTGGAGGTGAAATGCAGAGACCAGGATTTTCACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR GCA 72 bp GAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATaGCACCAAAGGTTCCTGAGTGAAAATCCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: EEQPDQPLVHEG*HQRFLSENPGL
Trigger: GAGACCAGGATTTTCACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
3UTR-3UTR CAA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAATTATGCCAATCAAATaGCAAGGTTGGAGATATGCT +
Preference number: 3 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGIMPIK*QGWRYA
Trigger: AGCATATCTCCAACCTTGCAATTTGATTGGCATAAT...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 72 bp ATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTaGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACA +
Preference number: 3 (lower is better)
Translates to: INSALVQPVHRC*IEREWAFSDGT
Trigger: TGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAAGCAAGCAGCTATGACTaGAGGAAGGTGTGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: VNIVPCLSNSSENESMGKASSYD*RKVCSG
Trigger: CCCACTGCACACCTTCCTCAAGTCATAGCTGCTTGC...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTGATATGCTAAAAGGTTaGAAGGAATCCAATCCTGGG +
Preference number: 3 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSDMLKG*KESNPG
Trigger: CCCAGGATTGGATTCCTTCAAACCTTTTAGCATATC...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACAAGCAAAGGCGATCATaGGATGGAATGATTATGTGT +
Preference number: 3 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNKQRRS*DGMIMC
Trigger: ACACATAATCATTCCATCCAATGATCGCCTTTGCTT...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 72 bp TGGAGATATGCTAAAAGGTTTGAAGGAATCCAATCCTaGGGCTATTGCACAGGACTTGGGGAAATCAAGTTG +
Preference number: 3 (lower is better)
Translates to: WRYAKRFEGIQS*GYCTGLGEIKL
Trigger: CAACTTGATTTCCCCAAGTCCTGTGCAATAGCCCCAGGATTGGATTCCTTCAAACCTTTTAGCATATCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAGCTATTGCACAGGACTaGGGGAAATCAAGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: EYNIKPETFPASLFSRKAAIAQD*GKSSCC
Trigger: GCAGCAACTTGATTTCCCCAAGTCCTGTGCAATAGC...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 72 bp TCACGAGCACTTGAGGACCTAGAAAGCAAACTGGAGTaGTTATGCCAATCAAATTGCAAGGTTGGAGATATG +
Preference number: 3 (lower is better)
Translates to: SRALEDLESKLE*LCQSNCKVGDM
Trigger: CATATCTCCAACCTTGCAATTTGATTGGCATAATCACTCCAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 72 bp AAAGGAAAGAGTGGTAAAGCAAAGGCGATCATTGGATaGAATGATTATGTGTCACGAGCACTTGAGGACCTA +
Preference number: 3 (lower is better)
Translates to: KGKSGKAKAIIG*NDYVSRALEDL
Trigger: TAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAATGATCGCCTTTGCTTTACCACTCTTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 72 bp CACAAGGACTCCCAAATGGCATATGGGTATGAATATTaGTCATTTCAGCTTCGGAACTTTTCAAGAAGTGGG +
Preference number: 3 (lower is better)
Translates to: HKDSQMAYGYEY*SFQLRNFSRSG
Trigger: CCCACTTCTTGAAAAGTTCCGAAGCTGAAATGATCAATATTCATACCCATATGCCATTTGGGAGTCCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAGCTATTGCACAGGACTaGGGGAAATCAAGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGAIAQD*GKSSCC
Trigger: GCAGCAACTTGATTTCCCCAAGTCCTGTGCAATAGC...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCCTTTCTTTTATCCCTTaGAGTACAAGGAGCTTGGAA +
Preference number: 3 (lower is better)
Translates to: KPETFPASLFSRKASTKLLSFIP*STRSLE
Trigger: TTCCAAGCTCCTTGTACTCAAAGGGATAAAAGAAAG...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR-3UTR CAA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCATTATGCCAATCAAATaGCAAGGTTGGAGATATGCT +
Preference number: 3 (lower is better)
Translates to: KPETFPASLFSRKASTKLIMPIK*QGWRYA
Trigger: AGCATATCTCCAACCTTGCAATTTGATTGGCATAAT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CCA 72 bp CAAACTGGAGTGATTATGCCAATCAAATTGCAAGGTTaGAGATATGCTAAAAGGTTTGAAGGAATCCAATCC +
Preference number: 3 (lower is better)
Translates to: QTGVIMPIKLQG*RYAKRFEGIQS
Trigger: GGATTGGATTCCTTCAAACCTTTTAGCATATCTCCAACCTTGCAATTTGATTGGCATAATCACTCCAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 72 bp CCTCCATATGGCTGGTTAATATATCTGAATAACAACTaGGTAGCTTTCTTTTATCCCTTTGAGTACAAGGAG +
Preference number: 3 (lower is better)
Translates to: PPYGWLIYLNNN*VAFFYPFEYKE
Trigger: CTCCTTGTACTCAAAGGGATAAAAGAAAGCTACTCAGTTGTTATTCAGATATATTAACCAGCCATATGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR TCA 72 bp AAATCGAGAAACACCACGAAACTCTGCATAATTAGATaGGCGCAAACTACACTTAATAGCACAAAATATCAA +
Preference number: 3 (lower is better)
Translates to: KSRNTTKLCIIR*AQTTLNSTKYQ
Trigger: TTGATATTTTGTGCTATTAAGTGTAGTTTGCGCTCATCTAATTATGCAGAGTTTCGTGGTGTTTCTCGATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCCGGGGGCGGGGAGGGTaGGGAGAACATGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSRGRGG*GEHAAL
Trigger: GAGCGCGGCATGTTCTCCTCACCCTCCCCGCCCCCG...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358821.8
CDS-3UTR TCA 90 bp CACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATGCCACGCACATAGGGGTCCGTaGGCCACCCATCGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: HLGREEQPDQPLVHEGCHAHRGP*ATHRPG
Trigger: ACCGGGGCGATGGGTGGCTCACGGACCCCTATGTGC...GTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAGCACATAGGGGTCCGTaGGCCACCCATCGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGAHRGP*ATHRPG
Trigger: ACCGGGGCGATGGGTGGCTCACGGACCCCTATGTGC...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACGCACATAGGGGTCCGTaGGCCACCCATCGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNAHRGP*ATHRPG
Trigger: ACCGGGGCGATGGGTGGCTCACGGACCCCTATGTGC...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACCCATCGGGCAGCTGCTaGGGACCCATGTCCACCGAG +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNPSGSC*GPMSTE
Trigger: CTCGGTGGACATGGGTCCTCAGCAGCTGCCCGATGG...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCCCAGGGACCAGGATATaGCCAGACGAGTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSPGTRI*PDESTR
Trigger: CCTGGTAGACTCGTCTGGTCATATCCTGGTCCCTGG...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGACGTAGAAGCACACGGTaGCTTTCGTGGGATCGCTCC +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGRRSTR*LSWDRS
Trigger: GGAGCGATCCCACGAAAGGCACCGTGTGCTTCTACG...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CAA 72 bp CAACTCCATCCAAGAAGTGACTGTCAGAGAAAGGAGTaGGTCACCAGGATCACGCAGCTGGAGTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: QLHPRSDCQRKE*VTRITQLESAL
Trigger: CAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp GGAGTCCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTCCCGGGTTCCGTAAGTaGTTGCTGGCTTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GVRPALVFTLSKVWLKTPPGFRK*LLASFG
Trigger: GCCAAAGGAAGCCAGCAATCACTTACGGAACCCGGG...AGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp GTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTGGAGTCCGCCCTGCTTTGCCACCAAAGGTTCCTaGGTGAAAATCCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VRERSWSPGSRSWSPPCFATKGS*VKILVS
Trigger: AGAGACCAGGATTTTCACTCAGGAACCTTTGGTGGC...AAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGACAGGCTGGAGTGCAGTaGCATGATCCCAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGQAGVQ*HDPSSL
Trigger: CAGTGAACTGGGATCATGCCACTGCACTCCAGCCTG...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp CAACTCCATCCAAGAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGAGGCGCTCACAGCATTaGTCCAAGCCAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: QLHPRSDCQRKELVTRITRRSQH*SKPRQG
Trigger: GCCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCT...CGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp GTGTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTGGGCCGAGAAGAGCAACCTGTCAAAGGTGTGGCTaGAAACACCTGGGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: VFTLSKVWLKTPGPRRATCQRCG*KHLGRE
Trigger: TTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACA...GGTTGCTCTTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CCA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCGATGACGGGAGGTATTaGAAGACTCTGACCATCGGG +
Preference number: 4 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSDDGRY*KTLTIG
Trigger: CCCGATGGTCAGAGTCTTCCAATACCTCCCGTCATC...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTGTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTGGGCCGAGAAGAGCAACCACCTTGTCAAAGGTGTaGCTGAAAACACCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: VFTLSKVWLKTPGPRRATTLSKV*LKTPGP
Trigger: CGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGT...GGTTGCTCTTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CCA 90 bp GAAAACACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATCCAGGATCACGCAGCTaGAGTCCGCCCTGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: ENTWAEKSNQISHWFMKDPGSRS*SPPCFS
Trigger: ACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGG...ATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACAGGCGCTCACAGCATTaGTCCAAGCCAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNRRSQH*SKPRQG
Trigger: GCCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCT...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAAAGGCGCTCACAGCATTaGTCCAAGCCAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKRRSQH*SKPRQG
Trigger: GCCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCT...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp CCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTGGGCCCTGGCTTCCTTTGGCTaGTCCACAGGTTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: PPCFSVHLVKGVAENTWALASFG*STGYLK
Trigger: TTTCAGATAACCTGTGGATCAGCCAAAGGAAGCCAG...GGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp CACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATGCCACCCAAAGGTTCCTGAGTaGAAATCCTGGTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HLGREEQPDQPLVHEGCHPKVPE*KSWSLH
Trigger: ATGCAGAGACCAGGATTTTCACTCAGGAACCTTTGG...GTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACCCAGGGACCAGGATATaGCCAGACGAGTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNPGTRI*PDESTR
Trigger: CCTGGTAGACTCGTCTGGTCATATCCTGGTCCCTGG...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp CCCCCGGGTTCCGTAAGTGATTGCTGGCTTCCTTTGGCTGATCCACAGGTTATCGGTTCCGTAAGTGATTaGTGGCTTCCTTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PPGSVSDCWLPLADPQVIGSVSD*WLPLAD
Trigger: ATCAGCCAAAGGAAGCCAGCAATCACTTACGGAACC...GATAACCTGTGGATCAGCCAAAGGAAGCCAGCAATCACTTACGGAACCCGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR GCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGACCGCGCCTGGCCCTCTaGTTTGTTTTTATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGPRLAL*FVFIWS
Trigger: ACTCCAAATAAAAACAAAGCAGAGGGCCAGGCGCGG...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTGGAGTCCGCCCTGCTTTATTGCTGGCTTCCTTTaGCTGATCCACAGGTTATCT +
Preference number: 4 (lower is better)
Translates to: VRERSWSPGSRSWSPPCFIAGFL*LIHRLS
Trigger: AGATAACCTGTGGATCAGCCAAAGGAAGCCAGCAAT...AAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CCA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCGAGGAAGGTGTGCAGTaGGGGACCTTAAACCATTTC +
Preference number: 4 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSEEGVQ*GTLNHF
Trigger: GAAATGGTTTAAGGTCCCCCACTGCACACCTTCCTC...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTGGGCCGAGAAGAGCAACCAGTCAGCCATTGGTTCATaGAGGATGCCACCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: VHLVKGVAENTWAEKSNQSAIGS*RMPPKV
Trigger: AACCTTTGGTGGCATCCTTCATGAACCAATGGCTGA...CTGGTTGCTCTTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAGCAGACACATTCATGTaGGGGACTAGACGGATTGAA +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGADTFM*GTRRIE
Trigger: TTCAATCCGTCTAGTCCCTCACATGAATGTGTCTGC...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTCAAGCAGCTATGACTTaGGGAAGGTGTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSQAAMT*GRCAVG
Trigger: CCCCACTGCACACCTTCCTCAAGTCATAGCTGCTTG...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTGGGAGGCAGAGAAGCTaGCAAGGTGGCATCGATCTC +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSGRQRS*QGGIDL
Trigger: GAGATCGATGCCACCTTGTCAGCTTCTCTGCCTCCC...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACTGCCCACAACTAGGTTaGGCTCTCAGTTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNCPQLG*ALSWVH
Trigger: GTGGACCCAACTGAGAGCTCAACCTAGTTGTGGGCA...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAGGGTACCTCCAGAGGTaGATTAGAATCTCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGGYLQR*IRISSL
Trigger: TAAGGAGGAGATTCTAATGCACCTCTGGAGGTACCC...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGATCTGATCGCTCTTTTTaGTGCGAGATACTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGSDRSF*CEILGV
Trigger: GACACCCAGTATCTCGCAGCAAAAAGAGCGATCAGA...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp CAACTCCATCCAAGAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGAGCTGGAGTCCGCCCTaGTTTAGTGTTCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: QLHPRSDCQRKELVTRITSWSPP*FSVHLV
Trigger: GACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCT...CGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CCA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTCGTCAGGGTAGGGTCTaGATCACCACAGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSRQGRV*ITTGLR
Trigger: TCTAAGCCCTGTGGTGATCCAGACCCTACCCTGACG...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CAA 72 bp AAACACCTGGGCCGAGAAGAGCAACCAGATCAGCCATaGGTTCATGAAGGATGCCACCAAAGGTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: KHLGREEQPDQP*VHEGCHQRFLS
Trigger: ACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGTATCTCTCTGTGCCCTaGCCCACGTTGTCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLYLSVP*PTLSPG
Trigger: TCCGGGGGACAACGTGGGTCAGGGCACAGAGAGATA...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358821.8
CDS-3UTR TCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCACCATCGGGCAGCTGCTaGGGACCCATGTCCACCGAG +
Preference number: 4 (lower is better)
Translates to: EYNIKPETFPASLFSRKAPSGSC*GPMSTE
Trigger: CTCGGTGGACATGGGTCCTCAGCAGCTGCCCGATGG...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTGCGCCCTCGATCCCATaGATAGAAAGAGATGGGTAC +
Preference number: 4 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSAPSIP*IERDGY
Trigger: GTACCCATCTCTTTCTATTCATGGGATCGAGGGCGC...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTGGGATGTGGGGGAGGTaGATCTGTCAGTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSGMWGR*ICQWIR
Trigger: TCTGATCCACTGACAGATTCACCTCCCCCACATCCC...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACATGCCCACAACTAGGTTaGGCTCTCAGTTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTCPQLG*ALSWVH
Trigger: GTGGACCCAACTGAGAGCTCAACCTAGTTGTGGGCA...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGACAGCAACGTAATAATTaGGACACTGCTGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGQQRNN*DTAGLR
Trigger: TCTGAGACCAGCAGTGTCTCAATTATTACGTTGCTG...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGAGGGTGAGGAGAACATaGCGCGCTCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLRVRRT*RAPAAA
Trigger: TGCTGCTGCTGGAGCGCGGCATGTTCTCCTCACCCT...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358821.8
CDS-3UTR CCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCCAGAGTCGCTCTCGATaGCCACCCACTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLQSRSR*PPTPSA
Trigger: CGCTGAAGGAGTGGGTGGCCATCGAGAGCGACTCTG...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGACACGGTGCCTTTCGTaGGATCGCTCCCCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLTRCLS*DRSPVR
Trigger: CCGAACTGGGGAGCGATCCCACGAAAGGCACCGTGT...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGCCAGTTCGGCCAGGATaGCGGGAGGTATTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWPVRPG*REVLED
Trigger: GTCTTCCAATACCTCCCGTCATCCTGGCCGAACTGG...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp CAGGATCACGCAGCTGGAGTCCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGGATCCACAGGTTATCTaGAATTACAATGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: QDHAAGVRPALVFTLSKVDPQVI*NYNVVH
Trigger: GTGGACTACATTGTAATTTCAGATAACCTGTGGATC...CACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR GCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTTTCACAGGAAGATCTTaGTCCAGGGCTCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSFTGRS*SRALKA
Trigger: CGCCTTCAGAGCCCTGGAGCAAGATCTTCCTGTGAA...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGTCGCCCAGGCTGGAGTaGAGTGGCATGATCCCAGTT +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLSPRLE*SGMIPV
Trigger: AACTGGGATCATGCCACTGCACTCCAGCCTGGGCGA...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCAAGCGAGGCACAGGCTaGACAGAGTCGCTCTCGATG +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLKRGTG*TESLSM
Trigger: CATCGAGAGCGACTCTGTCCAGCCTGTGCCTCGCTT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACAGATGACGGGAGGTATTaGAAGACTCTGACCATCGGG +
Preference number: 4 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTDDGRY*KTLTIG
Trigger: CCCGATGGTCAGAGTCTTCCAATACCTCCCGTCATC...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAAGAGAAGCTGACAAGGTaGCATCGATCTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKEKLTR*HRSQER
Trigger: CCTTTCCTGAGATCGATGCCACCTTGTCAGCTTCTC...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CAA 72 bp ACAGAGCCAGCCTCTTCCATCCCCTCAATGATGAATTaGATATTCACAGGAAGATCTTGCTCCAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TEPASSIPSMMN*IFTGRSCSRAL
Trigger: CAGAGCCCTGGAGCAAGATCTTCCTGTGAATATCAAATTCATCATTGAGGGGATGGAAGAGGCTGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR TCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAGATCCACAGGTTATCTaGAATTACAATGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGDPQVI*NYNVVH
Trigger: GTGGACTACATTGTAATTTCAGATAACCTGTGGATC...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGATTTCACCTCCACCATaGAGTAGCTGTTCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLISPPP*SSCSPG
Trigger: CCCGGGGGAACAGCTACTTCATGGTGGAGGTGAAAT...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCGGGATGTGGGGGAGGTaGATCTGTCAGTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLGMWGR*ICQWIR
Trigger: TCTGATCCACTGACAGATTCACCTCCCCCACATCCC...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCCAAGCAGCTATGACTTaGGGAAGGTGTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLQAAMT*GRCAVG
Trigger: CCCCACTGCACACCTTCCTCAAGTCATAGCTGCTTG...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACAAGTCGTGACCCTGGGTaGCAGAAAAACATGGACTCT +
Preference number: 4 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTSRDPG*QKNMDS
Trigger: AGAGTCCATGTTTTTCTGTCACCCAGGGTCACGACT...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACGGTTCCGTAAGTGATTaGTGGCTTCCTTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNGSVSD*WLPLAD
Trigger: ATCAGCCAAAGGAAGCCAGCAATCACTTACGGAACC...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAAGGTTCCGTAAGTGATTaGTGGCTTCCTTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKGSVSD*WLPLAD
Trigger: ATCAGCCAAAGGAAGCCAGCAATCACTTACGGAACC...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTCTCGGCCTCCGAAAGTaGTGGGATTATGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETLGLRK*WDYGHE
Trigger: CTCATGCCCATAATCCCAGCACTTTCGGAGGCCGAG...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAAGAAGGAATCCAATCCTaGGGCTATTGCACAGGACTT +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKEGIQS*GYCTGL
Trigger: AAGTCCTGTGCAATAGCCCCAGGATTGGATTCCTTC...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACTGGATAGAGAGAGAGTaGGCCTTTTCTGATGGGACA +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNWIERE*AFSDGT
Trigger: TGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCA...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACGGGCTTAGAATTGGGTaGAAAAACAGGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNGLRIG*KNRREE
Trigger: CTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCC...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGGCTTCCTTTGGCTaGTCCACAGGTTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTLASFG*STGYLK
Trigger: TTTCAGATAACCTGTGGATCAGCCAAAGGAAGCCAG...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACCAAAGGTTCCTGAGTaGAAATCCTGGTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTPKVPE*KSWSLH
Trigger: ATGCAGAGACCAGGATTTTCACTCAGGAACCTTTGG...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTCCAAAGGTTCCTGAGTaGAAATCCTGGTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSPKVPE*KSWSLH
Trigger: ATGCAGAGACCAGGATTTTCACTCAGGAACCTTTGG...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGGCGCCCTCGATCCCATaGATAGAAAGAGATGGGTAC +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWAPSIP*IERDGY
Trigger: GTACCCATCTCTTTCTATTCATGGGATCGAGGGCGC...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTGCAGACACATTCATGTaGGGGACTAGACGGATTGAA +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSADTFM*GTRRIE
Trigger: TTCAATCCGTCTAGTCCCTCACATGAATGTGTCTGC...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAGGGAGGCAGAGAAGCTaGCAAGGTGGCATCGATCTC +
Preference number: 4 (lower is better)
Translates to: EYNIKPETFPASLFSRKAGRQRS*QGGIDL
Trigger: GAGATCGATGCCACCTTGTCAGCTTCTCTGCCTCCC...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAATTGGTTCATGAAGGATaGCACCAAAGGTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKLVHEG*HQRFLS
Trigger: ACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAA...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTGGGTACCTCCAGAGGTaGATTAGAATCTCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSGYLQR*IRISSL
Trigger: TAAGGAGGAGATTCTAATGCACCTCTGGAGGTACCC...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACATCTGATCGCTCTTTTTaGTGCGAGATACTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTSDRSF*CEILGV
Trigger: GACACCCAGTATCTCGCAGCAAAAAGAGCGATCAGA...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCAAAAATACTCATCTTTaGACAAGGACTCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSKNTHL*TRTPKW
Trigger: CCATTTGGGAGTCCTTGTGCAAAGATGAGTATTTTT...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAAAGCGAGGCACAGGCTaGACAGAGTCGCTCTCGATG +
Preference number: 4 (lower is better)
Translates to: EYNIKPETFPASLFSRKAKRGTG*TESLSM
Trigger: CATCGAGAGCGACTCTGTCCAGCCTGTGCCTCGCTT...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAACAAGGACTCCCAAATaGCATATGGGTATGAATATT +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGTRTPK*HMGMNI
Trigger: AATATTCATACCCATATGCCATTTGGGAGTCCTTGT...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGCCTGTGCACAGATGTTaGATAGAGAGAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWPVHRC*IEREWA
Trigger: GGCCCACTCTCTCTCTATCCAACATCTGTGCACAGG...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAAATGGACTCTGAACTCTaGCAATCCAGGGTTGGAATA +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKMDSEL*QSRVGI
Trigger: TATTCCAACCCTGGATTGCCAGAGTTCAGAGTCCAT...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTATGGACTCTGAACTCTaGCAATCCAGGGTTGGAATA +
Preference number: 4 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSMDSEL*QSRVGI
Trigger: TATTCCAACCCTGGATTGCCAGAGTTCAGAGTCCAT...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAACCAGTTCGGCCAGGATaGCGGGAGGTATTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: VNIVPCLSNSSENESMGKPVRPG*REVLED
Trigger: GTCTTCCAATACCTCCCGTCATCCTGGCCGAACTGG...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCATTTCACCTCCACCATaGAGTAGCTGTTCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLISPPP*SSCSPG
Trigger: CCCGGGGGAACAGCTACTTCATGGTGGAGGTGAAAT...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGGCCACCAAAGGTTCCTaGGTGAAAATCCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWATKGS*VKILVS
Trigger: AGAGACCAGGATTTTCACTCAGGAACCTTTGGTGGC...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTAGTCGTGACCCTGGGTaGCAGAAAAACATGGACTCT +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETSRDPG*QKNMDS
Trigger: AGAGTCCATGTTTTTCTGTCACCCAGGGTCACGACT...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp CCAGATCAGCCATTGGTTCATGAAGGATGCCACCAAAGGTTCCTGAGTGAAAATTTGGTTCATGAAGGATaGCACCAAAGGTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: PDQPLVHEGCHQRFLSENLVHEG*HQRFLS
Trigger: ACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAA...ATTTTCACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR GCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGCAATCCTGGGGCTATTaGACAGGACTTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWQSWGY*TGLGEI
Trigger: GATTTCCCCAAGTCCTGTGCAATAGCCCCAGGATTG...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTCAATCCTGGGGCTATTaGACAGGACTTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETQSWGY*TGLGEI
Trigger: GATTTCCCCAAGTCCTGTGCAATAGCCCCAGGATTG...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCGTTAATATAGTACCATaGCTTAGTAACTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSVNIVP*LSNSSE
Trigger: TTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGCCGCGCCTGGCCCTCTaGTTTGTTTTTATTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWPRLAL*FVFIWS
Trigger: ACTCCAAATAAAAACAAAGCAGAGGGCCAGGCGCGG...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCTGGGATCCATTAGGCTaGAGTTCTGAAGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLWDPLG*SSEASS
Trigger: GCTAGAGGCTTCAGAACTCCAGCCTAATGGATCCCA...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACTGGAGGTCAATGTACTaGAAGACTTTCTCTAACAGC +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNWRSMY*KTFSNS
Trigger: GCTGTTAGAGAAAGTCTTCCAGTACATTGACCTCCA...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358821.8
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATCAGAGTCGCTCTCGATaGCCACCCACTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNQSRSR*PPTPSA
Trigger: CGCTGAAGGAGTGGGTGGCCATCGAGAGCGACTCTG...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATACACGGTGCCTTTCGTaGGATCGCTCCCCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNTRCLS*DRSPVR
Trigger: CCGAACTGGGGAGCGATCCCACGAAAGGCACCGTGT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACATTTTGGCAATTGGAATaGTGGATCCATCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTFWQLE*WIHPGS
Trigger: TGATCCGGGATGGATCCACCATTCCAATTGCCAAAA...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGAGCACCACGCTCTTGTaGACGATCTCCTGGAACATT +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWSTTLL*TISWNI
Trigger: AATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCT...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAAATCATTGTAGTCAGTaGTGGAGACCAACATTTTTA +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGNHCSQ*WRPTFL
Trigger: TAAAAATGTTGGTCTCCACCACTGACTACAATGATT...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTGAGAAGCTGACAAGGTaGCATCGATCTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETEKLTR*HRSQER
Trigger: CCTTTCCTGAGATCGATGCCACCTTGTCAGCTTCTC...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTCTGGCAATCCAGGGTTaGAATATCCTAGATTCTACA +
Preference number: 4 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSLAIQG*NILDST
Trigger: TGTAGAATCTAGGATATTCCAACCCTGGATTGCCAG...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGATTGCCTCCATATGGCTaGTTAATATATCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGLPPYG*LIYLNN
Trigger: GTTATTCAGATATATTAACCAGCCATATGGAGGCAA...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGCTGGCTTCCTTTGGCTaGTCCACAGGTTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWLASFG*STGYLK
Trigger: TTTCAGATAACCTGTGGATCAGCCAAAGGAAGCCAG...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATCCCGGGTTCCGTAAGTaGTTGCTGGCTTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNPGFRK*LLASFG
Trigger: GCCAAAGGAAGCCAGCAATCACTTACGGAACCCGGG...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTTCAGCCATTGGTTCATaGAGGATGCCACCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETSAIGS*RMPPKV
Trigger: AACCTTTGGTGGCATCCTTCATGAACCAATGGCTGA...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACTGTAGTTCCACCTGTTaGTTTTCTCATTCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNCSSTC*FSHSAN
Trigger: ATTCGCAGAATGAGAAAATCAACAGGTGGAACTACA...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTTGTAGTTCCACCTGTTaGTTTTCTCATTCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSCSSTC*FSHSAN
Trigger: ATTCGCAGAATGAGAAAATCAACAGGTGGAACTACA...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAATGCTGCAAGCAGCTATaGCTTGAGGAAGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQECCKQL*LEEGVQ
Trigger: CTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCA...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACTTTCTTTTATCCCTTTaGGTACAAGGAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNFLLSL*VQGAWK
Trigger: CTTCCAAGCTCCTTGTACTCAAAGGGATAAAAGAAA...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATCGTAGAAGCACACGGTaGCTTTCGTGGGATCGCTCC +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNRRSTR*LSWDRS
Trigger: GGAGCGATCCCACGAAAGGCACCGTGTGCTTCTACG...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGGATCGCTCTTTTTGCTaGGAGATACTGGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWDRSFC*EILGVI
Trigger: GATGACACCCAGTATCTCGCAGCAAAAAGAGCGATC...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGGAATCACTGCCTGCCTaGTCCAGTCCTTTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWESLPA*SSPFKG
Trigger: ACCTTTAAAAGGACTGGAGCAGGCAGGCAGTGATTC...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCGGTGAACTGAATCACTaGCTGCCTGCTCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLGELNH*LPAPVL
Trigger: AAGGACTGGAGCAGGCAGGCAGTGATTCAGTTCACC...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTTTGTGGACGATCTCCTaGAACATTTTGGCAATTGGA +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSLWTIS*NILAIG
Trigger: TCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAA...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAACCTGTGCACAGATGTTaGATAGAGAGAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEPVHRC*IEREWA
Trigger: GGCCCACTCTCTCTCTATCCAACATCTGTGCACAGG...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAACAGGCTGGAGTGCAGTaGCATGATCCCAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: VNIVPCLSNSSENESMGKQAGVQ*HDPSSL
Trigger: CAGTGAACTGGGATCATGCCACTGCACTCCAGCCTG...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTTCATTCTCCCGAGTTTaGGATCCATTAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETSFSRV*DPLGWS
Trigger: ACTCCAGCCTAATGGATCCCAAACTCGGGAGAATGA...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582365.1
CDS-3UTR TCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAGCCACCAAAGGTTCCTaGGTGAAAATCCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEATKGS*VKILVS
Trigger: AGAGACCAGGATTTTCACTCAGGAACCTTTGGTGGC...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCTTCCAAACACTGTTCTaGTCGCTCTTTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLFQTLF*SLFLLR
Trigger: TCGCAGCAAAAAGAGCGATCAGAACAGTGTTTGGAA...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCACTAGAAGGTTCTTGTaGTTAATGGAGCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLTRRFL*LMELGH
Trigger: ATGGCCCAGCTCCATTAATCACAAGAACCTTCTAGT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTGAAAGCAAACTGGAGTaGTTATGCCAATCAAATTGC +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSESKLE*LCQSNC
Trigger: GCAATTTGATTGGCATAATCACTCCAGTTTGCTTTC...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTAAAACTTCAATGGGGTaGGAGAAATTCTATCAGGAT +
Preference number: 4 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSKTSMG*EKFYQD
Trigger: ATCCTGATAGAATTTCTCTCACCCCATTGAAGTTTT...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAAAGAGTCAAGGTGAACTaGATCACTGCCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VNIVPCLSNSSENESMGKRVKVN*ITACLL
Trigger: GAGCAGGCAGGCAGTGATTCAGTTCACCTTGACTCT...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAACTCTGCATAATTAGATaGGCGCAAACTACACTTAAT +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKLCIIR*AQTTLN
Trigger: ATTAAGTGTAGTTTGCGCTCATCTAATTATGCAGAG...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTGGGGAGACCAGTCGTaGCCCTGGGTGACAGAAAAA +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNWGDQS*PWVTEK
Trigger: TTTTTCTGTCACCCAGGGTCACGACTGGTCTCCCCA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGCCCAACTTTACTGGGTaGTCATTTTTGTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLPNFTG*SFLSKC
Trigger: GCACTTGGACAAAAATGATCACCCAGTAAAGTTGGG...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAACCATTCTCCCGAGTTTaGGATCCATTAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEPFSRV*DPLGWS
Trigger: ACTCCAGCCTAATGGATCCCAAACTCGGGAGAATGG...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358821.8
CDS-3UTR CCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCATTGCTGGCTTCCTTTaGCTGATCCACAGGTTATCT +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLIAGFL*LIHRLS
Trigger: AGATAACCTGTGGATCAGCCAAAGGAAGCCAGCAAT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCAGCACCACGCTCTTGTaGACGATCTCCTGGAACATT +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLSTTLL*TISWNI
Trigger: AATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCT...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGACGTCAGGGTAGGGTCTaGATCACCACAGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGRQGRV*ITTGLR
Trigger: TCTAAGCCCTGTGGTGATCCAGACCCTACCCTGACG...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CAA 72 bp CAATCAAATTGCAAGGTTGGAGATATGCTAAAAGGTTaGAAGGAATCCAATCCTGGGGCTATTGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: QSNCKVGDMLKG*KESNPGAIAQD
Trigger: GTCCTGTGCAATAGCCCCAGGATTGGATTCCTTCAAACCTTTTAGCATATCTCCAACCTTGCAATTTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTGCTGCAAGCAGCTATaGCTTGAGGAAGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNCCKQL*LEEGVQ
Trigger: CTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCTGTGTCACGAGCACTTaGGGACCTAGAAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLCVTST*GPRKQT
Trigger: AGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACA...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATAGAGTCAAGGTGAACTaGATCACTGCCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNRVKVN*ITACLL
Trigger: GAGCAGGCAGGCAGTGATTCAGTTCACCTTGACTCT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGATTCACAGGAAGATCTTaGTCCAGGGCTCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGFTGRS*SRALKA
Trigger: CGCCTTCAGAGCCCTGGAGCAAGATCTTCCTGTGAA...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTATTTCTCAACCCGGCTaGTATTCCGGTATTCTTCTA +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETISQPG*YSGILL
Trigger: TAGAAGAATACCGGAATAGCAGCCGGGTTGAGAAAT...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCGATCGCTCTTTTTGCTaGGAGATACTGGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLDRSFC*EILGVI
Trigger: GATGACACCCAGTATCTCGCAGCAAAAAGAGCGATC...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTTATCAGGATAAATTCTaGTCTGGTGCAACCTGTGCA +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETYQDKF*SGATCA
Trigger: TGCACAGGTTGCACCAGAGCAGAATTTATCCTGATA...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCGAATCACTGCCTGCCTaGTCCAGTCCTTTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLESLPA*SSPFKG
Trigger: ACCTTTAAAAGGACTGGAGCAGGCAGGCAGTGATTC...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAGGTGAACTGAATCACTaGCTGCCTGCTCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGGELNH*LPAPVL
Trigger: AAGGACTGGAGCAGGCAGGCAGTGATTCAGTTCACC...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTAGTCCTTATCTACAGTaGCAAATGCATCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETSPYLQ*QMHQVG
Trigger: ACCTACCTGATGCATTTGGCACTGTAGATAAGGACT...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAATCTTCTAGGTCTAGATaGATGGCTTTGTATGTATTT +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKSSRSR*MALYVF
Trigger: AAATACATACAAAGCCATCCATCTAGACCTAGAAGA...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTATGAATAGAAAGAGATaGGTACCTCCAGAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETMNRKR*VPPEVH
Trigger: ATGCACCTCTGGAGGTACCCATCTCTTTCTATTCAT...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGATGAATAGAAAGAGATaGGTACCTCCAGAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLMNRKR*VPPEVH
Trigger: ATGCACCTCTGGAGGTACCCATCTCTTTCTATTCAT...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCGTAGTCCTAGAGTCATaGAAACAACCATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLVVLES*KQPSCW
Trigger: CCAACAAGATGGTTGTTTCCATGACTCTAGGACTAC...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGATCCCGGATCATATCTaGTTCTGTTCCAAACACTGT +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWIPDHI*FCSKHC
Trigger: ACAGTGTTTGGAACAGAACCAGATATGATCCGGGAT...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAGAAGGAATCCAATCCTaGGGCTATTGCACAGGACTT +
Preference number: 4 (lower is better)
Translates to: EYNIKPETFPASLFSRKAEGIQS*GYCTGL
Trigger: AAGTCCTGTGCAATAGCCCCAGGATTGGATTCCTTC...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAACATTGTAGTCAGTGGTaGAGACCAACATTTTTATTA +
Preference number: 4 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKHCSQW*RPTFLL
Trigger: TAATAAAAATGTTGGTCTCCACCACTGACTACAATG...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTCTGGCAATCCAGGGTTaGAATATCCTAGATTCTACA +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETLAIQG*NILDST
Trigger: TGTAGAATCTAGGATATTCCAACCCTGGATTGCCAG...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTGGTGACAGAAAAACATaGACTCTGAACTCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETGDRKT*TLNSGN
Trigger: ATTGCCAGAGTTCAGAGTCCATGTTTTTCTGTCACC...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCGATCCACAGGTTATCTaGAATTACAATGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLDPQVI*NYNVVH
Trigger: GTGGACTACATTGTAATTTCAGATAACCTGTGGATC...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAAATAGAATTGGAGATGTaGTGGCTTGAAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VNIVPCLSNSSENESMGKIELEM*WLEASC
Trigger: GCAGGAGGCTTCAAGCCATCACATCTCCAATTCTAT...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAACAGCAACGTAATAATTaGGACACTGCTGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEQQRNN*DTAGLR
Trigger: TCTGAGACCAGCAGTGTCTCAATTATTACGTTGCTG...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCCCCAACTTTACTGGGTaGTCATTTTTGTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLPNFTG*SFLSKC
Trigger: GCACTTGGACAAAAATGATCACCCAGTAAAGTTGGG...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTAAAATATCAAACACCTaGTGCTGTTCTTTAACGATG +
Preference number: 4 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSKISNT*CCSLTM
Trigger: CATCGTTAAAGAACAGCAGCAGGTGTTTGATATTTT...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTGGGATCCATTAGGCTaGAGTTCTGAAGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNWDPLG*SSEASS
Trigger: GCTAGAGGCTTCAGAACTCCAGCCTAATGGATCCCA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAGAGGAAGGTGTGCAGTaGGGGACCTTAAACCATTTC +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGEEGVQ*GTLNHF
Trigger: GAAATGGTTTAAGGTCCCCCACTGCACACCTTCCTC...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGTACGCCCAACTTTACTaGGTGATCATTTTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: RNSIRINSALVQPVHRCWYAQLY*VIIFVQ
Trigger: TTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTA...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCTACGCCCAACTTTACTaGGTGATCATTTTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLYAQLY*VIIFVQ
Trigger: TTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTA...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTCAGCCATTGGTTCATaGAGGATGCCACCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNSAIGS*RMPPKV
Trigger: AACCTTTGGTGGCATCCTTCATGAACCAATGGCTGA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGATGTGTCACGAGCACTTaGGGACCTAGAAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGCVTST*GPRKQT
Trigger: AGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACA...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGAAAACTTCAATGGGGTaGGAGAAATTCTATCAGGAT +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLKTSMG*EKFYQD
Trigger: ATCCTGATAGAATTTCTCTCACCCCATTGAAGTTTT...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAATAGAATTGGAGATGTaGTGGCTTGAAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGIELEM*WLEASC
Trigger: GCAGGAGGCTTCAAGCCATCACATCTCCAATTCTAT...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTCTCTGCATAATTAGATaGGCGCAAACTACACTTAAT +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETLCIIR*AQTTLN
Trigger: ATTAAGTGTAGTTTGCGCTCATCTAATTATGCAGAG...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAATTTCTCAACCCGGCTaGTATTCCGGTATTCTTCTA +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEISQPG*YSGILL
Trigger: TAGAAGAATACCGGAATAGCAGCCGGGTTGAGAAAT...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATATCAGGATAAATTCTaGTCTGGTGCAACCTGTGCA +
Preference number: 4 (lower is better)
Translates to: EYNIKPETFPASLFSRKAYQDKF*SGATCA
Trigger: TGCACAGGTTGCACCAGAGCAGAATTTATCCTGATA...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAGAAGGAAGACGAGGCTaGTATAGTGGAGCTATTCAC +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGEGRRG*YSGAIH
Trigger: GTGAATAGCTCCACTATACCAGCCTCGTCTTCCTTC...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358821.8
CDS-3UTR CCA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAAATTGCTGGCTTCCTTTaGCTGATCCACAGGTTATCT +
Preference number: 4 (lower is better)
Translates to: VNIVPCLSNSSENESMGKIAGFL*LIHRLS
Trigger: AGATAACCTGTGGATCAGCCAAAGGAAGCCAGCAAT...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCGTAGTCCTAGAGTCATaGAAACAACCATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLVVLES*KQPSCW
Trigger: CCAACAAGATGGTTGTTTCCATGACTCTAGGACTAC...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAATGGCAATTGGAATGGTaGATCCATCCCGGATCATAT +
Preference number: 4 (lower is better)
Translates to: VNIVPCLSNSSENESMGKWQLEW*IHPGSY
Trigger: ATATGATCCGGGATGGATCCACCATTCCAATTGCCA...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAATCTCCTGGAACATTTTaGCAATTGGAATGGTGGATC +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQESPGTF*QLEWWI
Trigger: GATCCACCATTCCAATTGCCAAAATGTTCCAGGAGA...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGATGGATAGAGAGAGAGTaGGCCTTTTCTGATGGGACA +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGWIERE*AFSDGT
Trigger: TGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCA...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAGGTGACAGAAAAACATaGACTCTGAACTCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEGDRKT*TLNSGN
Trigger: ATTGCCAGAGTTCAGAGTCCATGTTTTTCTGTCACC...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGATGCACAAATTCATCCTaGTGGAGGTCAATGTACTGG +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGCTNSS*WRSMYW
Trigger: CCAGTACATTGACCTCCATCAGGATGAATTTGTGCA...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358821.8
CDS-3UTR TCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGATTCCAAACACTGTTCTaGTCGCTCTTTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGFQTLF*SLFLLR
Trigger: TCGCAGCAAAAAGAGCGATCAGAACAGTGTTTGGAA...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATACTAGAAGGTTCTTGTaGTTAATGGAGCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNTRRFL*LMELGH
Trigger: ATGGCCCAGCTCCATTAATCACAAGAACCTTCTAGT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCCAGATTCAGCAGGAATaGAGATCAGCGAATACATAT +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLQIQQE*RSANTY
Trigger: ATATGTATTCGCTGATCTTCATTCCTGCTGAATCTG...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTTGGTTCATGAAGGATaGCACCAAAGGTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNLVHEG*HQRFLS
Trigger: ACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCTTATGCCAATCAAATTaGAAGGTTGGAGATATGCTA +
Preference number: 4 (lower is better)
Translates to: KPETFPASLFSRKASTKLLCQSN*KVGDML
Trigger: TAGCATATCTCCAACCTTGCAATTTGATTGGCATAA...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAATTTGCTGCGAGATACTaGGTGTCATCAATATTTGCA +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEFAARY*VSSIFA
Trigger: TGCAAATATTGATGACACCCAGTATCTCGCAGCAAA...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTGGCAATTGGAATGGTaGATCCATCCCGGATCATAT +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNWQLEW*IHPGSY
Trigger: ATATGATCCGGGATGGATCCACCATTCCAATTGCCA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTTTTGGCAATTGGAATaGTGGATCCATCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNFWQLE*WIHPGS
Trigger: TGATCCGGGATGGATCCACCATTCCAATTGCCAAAA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATGAACATTTTGGCAATTaGAATGGTGGATCCATCCCG +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNEHFGN*NGGSIP
Trigger: CGGGATGGATCCACCATTCCAATTGCCAAAATGTTC...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAATTGTGGACGATCTCCTaGAACATTTTGGCAATTGGA +
Preference number: 4 (lower is better)
Translates to: VNIVPCLSNSSENESMGKLWTIS*NILAIG
Trigger: TCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAA...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAAGGCAGCAAATAATTTaGTTCCCTCTATGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQERQQII*FPLCSS
Trigger: GGAACTACATAGAGGGAACCAAATTATTTGCTGCCT...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAAAGGCGATCATTGGATaGAATGATTATGTGTCACGA +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEKAIIG*NDYVSR
Trigger: TCGTGACACATAATCATTCCATCCAATGATCGCCTT...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCAAGGCGATCATTGGATaGAATGATTATGTGTCACGA +
Preference number: 4 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLKAIIG*NDYVSR
Trigger: TCGTGACACATAATCATTCCATCCAATGATCGCCTT...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ACAGTGCCAAATGCATCAGGTAGGTTCAACAAAATCGAGAAACACCACGAAACTAATCATTGTAGTCAGTaGTGGAGACCAACATTTTTA +
Preference number: 4 (lower is better)
Translates to: TVPNASGRFNKIEKHHETNHCSQ*WRPTFL
Trigger: TAAAAATGTTGGTCTCCACCACTGACTACAATGATT...AGTTTCGTGGTGTTTCTCGATTTTGTTGAACCTACCTGATGCATTTGGCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGTTGCCTCCATATGGCTaGTTAATATATCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: IGWNDYVSRALEDLESKLLPPYG*LIYLNN
Trigger: GTTATTCAGATATATTAACCAGCCATATGGAGGCAA...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
3UTR CAA 72 bp CCTAGAAAGCAAACTGGAGTGATTATGCCAATCAAATaGCAAGGTTGGAGATATGCTAAAAGGTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PRKQTGVIMPIK*QGWRYAKRFEG
Trigger: TCCTTCAAACCTTTTAGCATATCTCCAACCTTGCAATTTGATTGGCATAATCACTCCAGTTTGCTTTCTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAAAAAATACTCATCTTTaGACAAGGACTCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEKNTHL*TRTPKW
Trigger: CCATTTGGGAGTCCTTGTGCAAAGATGAGTATTTTT...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATATCCCGGATCATATCTaGTTCTGTTCCAAACACTGT +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNIPDHI*FCSKHC
Trigger: ACAGTGTTTGGAACAGAACCAGATATGATCCGGGAT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTCTCCTGGAACATTTTaGCAATTGGAATGGTGGATC +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNSPGTF*QLEWWI
Trigger: GATCCACCATTCCAATTGCCAAAATGTTCCAGGAGA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATCAGATTCAGCAGGAATaGAGATCAGCGAATACATAT +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNQIQQE*RSANTY
Trigger: ATATGTATTCGCTGATCTTCATTCCTGCTGAATCTG...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR TCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTTTCTTTTATCCCTTTaGGTACAAGGAGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNFLLSL*VQGAWK
Trigger: CTTCCAAGCTCCTTGTACTCAAAGGGATAAAAGAAA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAATTATGCCAATCAAATTaGAAGGTTGGAGATATGCTA +
Preference number: 4 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQELCQSN*KVGDML
Trigger: TAGCATATCTCCAACCTTGCAATTTGATTGGCATAA...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTTTGCTGCGAGATACTaGGTGTCATCAATATTTGCA +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNFAARY*VSSIFA
Trigger: TGCAAATATTGATGACACCCAGTATCTCGCAGCAAA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAATATCAAACACCTGCTaGTGTTCTTTAACGATGACT +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGISNTC*CSLTMT
Trigger: AGTCATCGTTAAAGAACAGCAGCAGGTGTTTGATAT...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATCTGAAAATGAATCCATaGGGAAATCATTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNLKMNP*GNHCSQ
Trigger: CTGACTACAATGATTTCCCCATGGATTCATTTTCAG...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGACTGAAAATGAATCCATaGGGAAATCATTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGLKMNP*GNHCSQ
Trigger: CTGACTACAATGATTTCCCCATGGATTCATTTTCAG...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATACAAGGACTCCCAAATaGCATATGGGTATGAATATT +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNTRTPK*HMGMNI
Trigger: AATATTCATACCCATATGCCATTTGGGAGTCCTTGT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAGTTAATATAGTACCATaGCTTAGTAACTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGVNIVP*LSNSSE
Trigger: TTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR GCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATAAAATATCAAACACCTaGTGCTGTTCTTTAACGATG +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNKISNT*CCSLTM
Trigger: CATCGTTAAAGAACAGCAGCAGGTGTTTGATATTTT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CCA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATTCTTCTAGGTCTAGATaGATGGCTTTGTATGTATTT +
Preference number: 4 (lower is better)
Translates to: DSAGMKISEYILLGNFLNSSRSR*MALYVF
Trigger: AAATACATACAAAGCCATCCATCTAGACCTAGAAGA...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS TCA 90 bp AGCACACGGTGCCTTTCGTGGGATCGCTCCCCAGTTCGGCCAGGATaGCGGGAGGTATTGGAAGACTCTGACCATCGGGCAGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: STRCLSWDRSPVRPG*REVLEDSDHRAAAE
Trigger: CTCAGCAGCTGCCCGATGGTCAGAGTCTTCCAATACCTCCCGTCATCCTGGCCGAACTGGGGAGCGATCCCACGAAAGGCACCGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS TCA 90 bp GGAGCCAGACTGTGGGAGGACTCTTCAGGGTTGCAGCAGGCCTCTTaGCTGTCTGGGTCCCCGTGGCCAAAGCCATTGGCAGCAACTCCA +
Preference number: 5 (lower is better)
Translates to: GARLWEDSSGLQQAS*LSGSPWPKPLAATP
Trigger: TGGAGTTGCTGCCAATGGCTTTGGCCACGGGGACCCAGACAGTCAAGAGGCCTGCTGCAACCCTGAAGAGTCCTCCCACAGTCTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp TTTCGTGGGATCGCTCCCCAGTTCGGCCAGGATGACGGGAGGTATTaGAAGACTCTGACCATCGGGCAGCTGCTGAGGACCCATGTCCAC +
Preference number: 5 (lower is better)
Translates to: FRGIAPQFGQDDGRY*KTLTIGQLLRTHVH
Trigger: GTGGACATGGGTCCTCAGCAGCTGCCCGATGGTCAGAGTCTTCCAATACCTCCCGTCATCCTGGCCGAACTGGGGAGCGATCCCACGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS GCA 90 bp AATGTTGTGGTCCTGGAGCCAGACTGTGGGAGGACTCTTCAGGGTTaGAGCAGGCCTCTTGACTGTCTGGGTCCCCGTGGCCAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: NVVVLEPDCGRTLQG*SRPLDCLGPRGQSH
Trigger: ATGGCTTTGGCCACGGGGACCCAGACAGTCAAGAGGCCTGCTGCAACCCTGAAGAGTCCTCCCACAGTCTGGCTCCAGGACCACAACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp ACGGCCATCATTCTGAAGAGCTCTTGTCTGAAGCGAGGCACAGGCTaGACAGAGTCGCTCTCGATGGCCACCCACTCCTTCAGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: TAIILKSSCLKRGTG*TESLSMATHSFSVC
Trigger: GCAGACGCTGAAGGAGTGGGTGGCCATCGAGAGCGACTCTGTCCAGCCTGTGCCTCGCTTCAGACAAGAGCTCTTCAGAATGATGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000585136.1
CDS CCA 90 bp ACTGTGGGAGGACTCTTCAGGGTTGCAGCAGGCCTCTTGACTGTCTaGGTCCCCGTGGCCAAAGCCATTGGCAGCAACTCCATCCAAGAA +
Preference number: 5 (lower is better)
Translates to: TVGGLFRVAAGLLTV*VPVAKAIGSNSIQE
Trigger: TTCTTGGATGGAGTTGCTGCCAATGGCTTTGGCCACGGGGACCCAGACAGTCAAGAGGCCTGCTGCAACCCTGAAGAGTCCTCCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS-3UTR CAA 90 bp AAAGGAGTTGGTCACCAGGATCACGCAGCTGGAGTCCGCCCTGCTTTAGTGTTCGCCAAGACAGGGCCTTaGTTGTCGGTCGCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: KGVGHQDHAAGVRPALVFAKTGP*LSVAPR
Trigger: ACGAGGAGCGACCGACAACAAAGGCCCTGTCTTGGC...GAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS TCA 90 bp GGGTCCCCGTGGCCAAAGCCATTGGCAGCAACTCCATCCAAGAAGTaGCTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: GSPWPKPLAATPSKK*LSEKGVGHQDHAAG
Trigger: TCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGGATGGAGTTGCTGCCAATGGCTTTGGCCACGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp ACGGCCATCATTCTGAAGAGCTCTTGTCTGAAGCGAGGCACAGGCTaGACAGAGTCGCTCTCGATGGCCACCCACTCCTTCAGCGTCATT +
Preference number: 5 (lower is better)
Translates to: TAIILKSSCLKRGTG*TESLSMATHSFSVI
Trigger: AATGACGCTGAAGGAGTGGGTGGCCATCGAGAGCGACTCTGTCCAGCCTGTGCCTCGCTTCAGACAAGAGCTCTTCAGAATGATGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582365.1
CDS-3UTR CAA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAGCCAAGACAGGGCCTTaGTTGTCGGTCGCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGAKTGP*LSVAPR
Trigger: ACGAGGAGCGACCGACAACAAAGGCCCTGTCTTGGC...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS GCA 90 bp GAGTCCCATGAAAGCCCCAAGAGGGTGACATTAAATATCTCTCTGTaGCCTGACCCACGTTGTCCCCCGGAAGGAAGACGAGGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: ESHESPKRVTLNISL*PDPRCPPEGRRGWY
Trigger: ATACCAGCCTCGTCTTCCTTCCGGGGGACAACGTGGGTCAGGGCACAGAGAGATATTTAATGTCACCCTCTTGGGGCTTTCATGGGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000585136.1
CDS CCA 90 bp GCAGCTGGAGTCCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGTaGCTGAAAACACCTGGGCCTGCAACAAATGAGGTCGGAGTGAGT +
Preference number: 5 (lower is better)
Translates to: AAGVRPALVFTLSKV*LKTPGPATNEVGVS
Trigger: ACTCACTCCGACCTCATTTGTTGCAGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp AGAAAACAAAGCCAGGTAGAAAGGAGTGTGCCAATGTTGTGGTCCTaGAGCCAGACTGTGGGAGGACTCTTCAGGGTTGCAGCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: RKQSQVERSVPMLWS*SQTVGGLFRVAAGL
Trigger: GAGGCCTGCTGCAACCCTGAAGAGTCCTCCCACAGTCTGGCTCCAGGACCACAACATTGGCACACTCCTTTCTACCTGGCTTTGTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS-3UTR CAA 90 bp GCAGCTGGAGTCCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGTGGCTGAAAAAGGCGCTCACAGCATaGATCCAAGCCAAGACAGGG +
Preference number: 5 (lower is better)
Translates to: AAGVRPALVFTLSKVWLKKALTA*IQAKTG
Trigger: CCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCTT...TTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CAA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCGCAAGCAGCTATGACTaGAGGAAGGTGTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSASSYD*RKVCSG
Trigger: CCCACTGCACACCTTCCTCAAGTCATAGCTGCTTGC...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp CACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATGCCACTGTCAGAGAAAGGAGTaGGTCACCAGGATCACGCAG +
Preference number: 5 (lower is better)
Translates to: HLGREEQPDQPLVHEGCHCQRKE*VTRITQ
Trigger: CTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACA...GTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CAA 90 bp GAAAACACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATAAGACAGGGCCTTTGTaGTCGGTCGCTCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: ENTWAEKSNQISHWFMKDKTGPL*SVAPRP
Trigger: TGGACGAGGAGCGACCGACAACAAAGGCCCTGTCTT...ATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CAA 90 bp GGAAGGTGTGCAGTGGGGGACCTTAAACCATTTCCAACATCTGTGCCTTTGAAAGCCAAGACAGGGCCTTaGTTGTCGGTCGCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: GRCAVGDLKPFPTSVPLKAKTGP*LSVAPR
Trigger: ACGAGGAGCGACCGACAACAAAGGCCCTGTCTTGGC...TTTCAAAGGCACAGATGTTGGAAATGGTTTAAGGTCCCCCACTGCACACCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp CAAGGAGCTTGGAAGATACTCCTTTCTGACTCCCACGTCAGGGTAGGGTCTGGAATTCACAGGAAGATCTaGCTCCAGGGCTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: QGAWKILLSDSHVRVGSGIHRKI*LQGSEG
Trigger: GCCTTCAGAGCCCTGGAGCAAGATCTTCCTGTGAAT...TCCAGACCCTACCCTGACGTGGGAGTCAGAAAGGAGTATCTTCCAAGCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GTTCACCTTGTCAAAGGTGTGGCTGAAAACACCTGGGCCGAGAAGAGCAACCAGATTCACAGGAAGATCTaGCTCCAGGGCTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: VHLVKGVAENTWAEKSNQIHRKI*LQGSEG
Trigger: GCCTTCAGAGCCCTGGAGCAAGATCTTCCTGTGAAT...CTGGTTGCTCTTCTCGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CAA 90 bp GAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTGGAGTCCGCAACCAGATCAGCCATaGGTTCATGAAGGATGCCAC +
Preference number: 5 (lower is better)
Translates to: EVTVRERSWSPGSRSWSPQPDQP*VHEGCH
Trigger: GTGGCATCCTTCATGAACCAATGGCTGATCTGGTTG...CGGACTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS TCA 90 bp AACCCAGTGGACCTGGGTTGCTTGTGTTACCACCCTCTGCCTCTCTaGGACACCATTCAGGACACGTTAACTGTCACCTTACTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: NPVDLGCLCYHPLPL*DTIQDTLTVTLLSC
Trigger: ACAGCTGAGTAAGGTGACAGTTAACGTGTCCTGAATGGTGTCTCAGAGAGGCAGAGGGTGGTAACACAAGCAACCCAGGTCCACTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS-3UTR CAA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCGATTGCTGGCTTCCTTaGGCTGATCCACAGGTTATC +
Preference number: 5 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSDCWLP*ADPQVI
Trigger: GATAACCTGTGGATCAGCCAAAGGAAGCCAGCAATC...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp CCAAGAAGTGACTGTCAGAGAAAGGAGTTGGTCACCAGGATCACGCAGCTGGAGGATTGCTGGCTTCCTTaGGCTGATCCACAGGTTATC +
Preference number: 5 (lower is better)
Translates to: PRSDCQRKELVTRITQLEDCWLP*ADPQVI
Trigger: GATAACCTGTGGATCAGCCAAAGGAAGCCAGCAATC...CTCCAGCTGCGTGATCCTGGTGACCAACTCCTTTCTCTGACAGTCACTTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS CCA 90 bp ACAGCTCCCAGCGGAATTAGCACCACGCTCTTGTGGACGATCTCCTaGAACATTTTGGCAATTGGAATGGTGGATCCATCCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: TAPSGISTTLLWTIS*NILAIGMVDPSRII
Trigger: TATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAATTCCGCTGGGAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS-3UTR CAA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACAAGGCGCTCACAGCATaGATCCAAGCCAAGACAGGG +
Preference number: 5 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNKALTA*IQAKTG
Trigger: CCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCTT...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTAAGGCGCTCACAGCATaGATCCAAGCCAAGACAGGG +
Preference number: 5 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSKALTA*IQAKTG
Trigger: CCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCTT...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS TCA 90 bp CACCTTGTCAAAGGTGTGGCTGAAAACACCTGGGCCTGCAACAAATaGGGTCGGAGTGAGTTACCTGCATCATGTTCACGTTCTCAGCTA +
Preference number: 5 (lower is better)
Translates to: HLVKGVAENTWACNK*GRSELPASCSRSQL
Trigger: TAGCTGAGAACGTGAACATGATGCAGGTAACTCACTCCGACCTCATTTGTTGCAGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 90 bp CTGAGACACCATTCAGGACACGTTAACTGTCACCTTACTCAGCTGTaGCTCACGCAAGGACTTTTTCCTCAGGACACAAACTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LRHHSGHVNCHLTQL*LTQGLFPQDTNSLL
Trigger: CAGCAGAGAGTTTGTGTCCTGAGGAAAAAGTCCTTGCGTGAGGCACAGCTGAGTAAGGTGACAGTTAACGTGTCCTGAATGGTGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp GCGGAATTAGCACCACGCTCTTGTGGACGATCTCCTGGAACATTTTaGCAATTGGAATGGTGGATCCATCCCGGATCATATCTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: AELAPRSCGRSPGTF*QLEWWIHPGSYLVL
Trigger: CAGAACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAATTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CCA 90 bp TCTCCATCATCAACAGCTCCCAGCGGAATTAGCACCACGCTCTTGTaGACGATCTCCTGGAACATTTTGGCAATTGGAATGGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: SPSSTAPSGISTTLL*TISWNILAIGMVDP
Trigger: TGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAATTCCGCTGGGAGCTGTTGATGATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS-3UTR CAA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACCATTCTGAAGAGCTCTaGTCTGAAGCGAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNHSEEL*SEARHR
Trigger: CCTGTGCCTCGCTTCAGACAAGAGCTCTTCAGAATG...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTATGCCCACAACTAGGTaGAGCTCTCAGTTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSMPTTR*SSQLGP
Trigger: TGGACCCAACTGAGAGCTCAACCTAGTTGTGGGCAT...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCTCTGGCAATCCAGGGTaGGAATATCCTAGATTCTAC +
Preference number: 5 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSSGNPG*EYPRFY
Trigger: GTAGAATCTAGGATATTCCAACCCTGGATTGCCAGA...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS GCA 90 bp GGCTACCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATaGCACCAAAGGTTCCTGAGTGAAAATCCTGGTCTCTGCATTTCA +
Preference number: 5 (lower is better)
Translates to: GYREEQPDQPLVHEG*HQRFLSENPGLCIS
Trigger: TGAAATGCAGAGACCAGGATTTTCACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000584004.5
CDS CCA 90 bp CCACGCTCTTGTGGACGATCTCCTGGAACATTTTGGCAATTGGAATaGTGGATCCATCCCGGATCATATCTGGTTCTGTTCCAAACACTG +
Preference number: 5 (lower is better)
Translates to: PRSCGRSPGTFWQLE*WIHPGSYLVLFQTL
Trigger: CAGTGTTTGGAACAGAACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS-3UTR CAA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGAAGACAGGGCCTTTGTaGTCGGTCGCTCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: IGWNDYVSRALEDLESKLKTGPL*SVAPRP
Trigger: TGGACGAGGAGCGACCGACAACAAAGGCCCTGTCTT...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GGGTCTGGATCACCACAGGGCTTAGAATTGGGTGGAAAAACAGGAGGGAAGAGCGATATGCTAAAAGGTTaGAAGGAATCCAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: GSGSPQGLELGGKTGGKSDMLKG*KESNPG
Trigger: CCCAGGATTGGATTCCTTCAAACCTTTTAGCATATC...GCTCTTCCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGGTGATCCAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS TCA 90 bp ATGACTGTTTTAGTTCCAGGCTCATCAAACGCGCCCTCGATCCCATaGATAGAAAGAGATGGGTACCTCCAGAGGTGCATTAGAATCTCC +
Preference number: 5 (lower is better)
Translates to: MTVLVPGSSNAPSIP*IERDGYLQRCIRIS
Trigger: GGAGATTCTAATGCACCTCTGGAGGTACCCATCTCTTTCTATTCATGGGATCGAGGGCGCGTTTGATGAGCCTGGAACTAAAACAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS GCA 90 bp AGATGCCTTCACTACCCATCACTACCAATGCTCCCCATTGATGAGTaGCCCTCTTTGCCCAAGATCTGCAGTTTTCAGTTAACAAATGGC +
Preference number: 5 (lower is better)
Translates to: RCLHYPSLPMLPIDE*PSLPKICSFQLTNG
Trigger: GCCATTTGTTAACTGAAAACTGCAGATCTTGGGCAAAGAGGGGCACTCATCAATGGGGAGCATTGGTAGTGATGGGTAGTGAAGGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp CGCTCTTGTGGACGATCTCCTGGAACATTTTGGCAATTGGAATGGTaGATCCATCCCGGATCATATCTGGTTCTGTTCCAAACACTGTTC +
Preference number: 5 (lower is better)
Translates to: RSCGRSPGTFWQLEW*IHPGSYLVLFQTLF
Trigger: GAACAGTGTTTGGAACAGAACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CCA 90 bp GCTGACGTGGGATTTAGGTTAATGAACAGCTTTGGAAAACATGGCTaGGAAATGGGTAACTGCTTGTGGTTAAGTGCCAGAAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: ADVGFRLMNSFGKHG*EMGNCLWLSARSQC
Trigger: GCACTGGCTTCTGGCACTTAACCACAAGCAGTTACCCATTTCCCAGCCATGTTTTCCAAAGCTGTTCATTAACCTAAATCCCACGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS-3UTR CAA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACAACCAGATCAGCCATaGGTTCATGAAGGATGCCAC +
Preference number: 5 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTQPDQP*VHEGCH
Trigger: GTGGCATCCTTCATGAACCAATGGCTGATCTGGTTG...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp AGATGTTGGATAGAGAGAGAGTGGGCCTTTTCTGATGGGACAGGAAGAAGGAACGGGTGTCATCAATATTaGCAATCCACGGGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: RCWIEREWAFSDGTGRRNGCHQY*QSTGVV
Trigger: GACTACACCCGTGGATTGCAAATATTGATGACACCC...GTTCCTTCTTCCTGTCCCATCAGAAAAGGCCCACTCTCTCTCTATCCAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACAGCTATTGCACAGGACTaGGGGAAATCAAGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTAIAQD*GKSSCC
Trigger: GCAGCAACTTGATTTCCCCAAGTCCTGTGCAATAGC...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS TCA 90 bp AAGGAAGAAGAGAGAGGCACATTGCACAGGCATCAGCTGACCTGTTaGTTTTCTCATTCTGCGAATGTTCTCCATCATCAACAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: KEEERGTLHRHQLTC*FSHSANVLHHQQLP
Trigger: TGGGAGCTGTTGATGATGGAGAACATTCGCAGAATGAGAAAATCAACAGGTCAGCTGATGCCTGTGCAATGTGCCTCTCTCTTCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS TCA 90 bp TTCTTTAAGCTCCCAGTCTGGACGATTTTCCATTCTCACATAAATTaGACAGGAGCTCACCCACGTGTAGACCCGGGTGTGTGCAGTAAA +
Preference number: 5 (lower is better)
Translates to: FFKLPVWTIFHSHIN*TGAHPRVDPGVCSK
Trigger: TTTACTGCACACACCCGGGTCTACACGTGGGTGAGCTCCTGTTCAATTTATGTGAGAATGGAAAATCGTCCAGACTGGGAGCTTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS-3UTR CAA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGATTCACAGGAAGATCTaGCTCCAGGGCTCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RNSIRINSALVQPVHRCWIHRKI*LQGSEG
Trigger: GCCTTCAGAGCCCTGGAGCAAGATCTTCCTGTGAAT...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACAGGAACATTTTGGCAATaGGAATGGTGGATCCATCCC +
Preference number: 5 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTGTFWQ*EWWIHP
Trigger: GGGATGGATCCACCATTCCAATTGCCAAAATGTTCC...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGATTAGCACCACGCTCTaGTGGACGATCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: RNSIRINSALVQPVHRCWISTTL*WTISWN
Trigger: GTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAAT...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCACCTGTGCACAGATGTaGGATAGAGAGAGAGTGGGC +
Preference number: 5 (lower is better)
Translates to: KPETFPASLFSRKASTKLTCAQM*DRERVG
Trigger: GCCCACTCTCTCTCTATCCAACATCTGTGCACAGGT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS GCA 90 bp AGGTTAATGAACAGCTTTGGAAAACATGGCTGGGAAATGGGTAACTaGTTGTGGTTAAGTGCCAGAAGCCAGTGCCAATTAGACGCCATT +
Preference number: 5 (lower is better)
Translates to: RLMNSFGKHGWEMGN*LWLSARSQCQLDAI
Trigger: AATGGCGTCTAATTGGCACTGGCTTCTGGCACTTAACCACAAGCAGTTACCCATTTCCCAGCCATGTTTTCCAAAGCTGTTCATTAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 90 bp CAGTTTTCTTTCTTCTGGCCATCCTGGAGCTGGTCTGCAAGAAGATaGCTGCTTCATAATAATTCACTCTACCGCTTCTTTTCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: QFSFFWPSWSWSARR*LLHNNSLYRFFSAC
Trigger: GCAAGCTGAAAAGAAGCGGTAGAGTGAATTATTATGAAGCAGGCATCTTCTTGCAGACCAGCTCCAGGATGGCCAGAAGAAAGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp TCTGTTCCAAACACTGTTCTGATCGCTCTTTTTGCTGCGAGATACTaGGTGTCATCAATATTTGCAATCCACGGGTGTAGTCCTAGAGTC +
Preference number: 5 (lower is better)
Translates to: SVPNTVLIALFAARY*VSSIFAIHGCSPRV
Trigger: GACTCTAGGACTACACCCGTGGATTGCAAATATTGATGACACCCAGTATCTCGCAGCAAAAAGAGCGATCAGAACAGTGTTTGGAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS-3UTR CAA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGCAACCAGATCAGCCATaGGTTCATGAAGGATGCCAC +
Preference number: 5 (lower is better)
Translates to: RNSIRINSALVQPVHRCWQPDQP*VHEGCH
Trigger: GTGGCATCCTTCATGAACCAATGGCTGATCTGGTTG...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS CCA 90 bp ATGAACAGCTTTGGAAAACATGGCTGGGAAATGGGTAACTGCTTGTaGTTAAGTGCCAGAAGCCAGTGCCAATTAGACGCCATTGAAAAA +
Preference number: 5 (lower is better)
Translates to: MNSFGKHGWEMGNCL*LSARSQCQLDAIEK
Trigger: TTTTTCAATGGCGTCTAATTGGCACTGGCTTCTGGCACTTAACCACAAGCAGTTACCCATTTCCCAGCCATGTTTTCCAAAGCTGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp CTCAGACTTTTCTTGGTCTTTGAAAAGGTAAGAAGTCCAGCTCACTaGCTGAAGGCTGACGTGGGATTTAGGTTAATGAACAGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: LRLFLVFEKVRSPAH*LKADVGFRLMNSFG
Trigger: TCCAAAGCTGTTCATTAACCTAAATCCCACGTCAGCCTTCAGCCAGTGAGCTGGACTTCTTACCTTTTCAAAGACCAAGAAAAGTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 90 bp TTCAGATGTTTAAGCCAGTTTTCTTTCTTCTGGCCATCCTGGAGCTaGTCTGCAAGAAGATGCCTGCTTCATAATAATTCACTCTACCGC +
Preference number: 5 (lower is better)
Translates to: FRCLSQFSFFWPSWS*SARRCLLHNNSLYR
Trigger: GCGGTAGAGTGAATTATTATGAAGCAGGCATCTTCTTGCAGACCAGCTCCAGGATGGCCAGAAGAAAGAAAACTGGCTTAAACATCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS-3UTR CAA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCACATTCTGAAGAGCTCTaGTCTGAAGCGAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: EYNIKPETFPASLFSRKAHSEEL*SEARHR
Trigger: CCTGTGCCTCGCTTCAGACAAGAGCTCTTCAGAATG...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAAAGACAGGGCCTTTGTaGTCGGTCGCTCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGKTGPL*SVAPRP
Trigger: TGGACGAGGAGCGACCGACAACAAAGGCCCTGTCTT...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GAAAACACCTGGGCCGAGAAGAGCAACCAGATCAGCCATTGGTTCATGAAGGATCCCTCAATGATGAATTaGATATTCACAGGAAGATCT +
Preference number: 5 (lower is better)
Translates to: ENTWAEKSNQISHWFMKDPSMMN*IFTGRS
Trigger: AGATCTTCCTGTGAATATCAAATTCATCATTGAGGG...ATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGCCCAGGTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584316.5
CDS-3UTR CAA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAATTAGCACCACGCTCTaGTGGACGATCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEISTTL*WTISWN
Trigger: GTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAAT...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp ACTTGGGGAAATCAAGTTGCTGCAAGCAGCTATGACTTGAGGAAGGTGTGCAGTAAGCAAAGGCGATCATaGGATGGAATGATTATGTGT +
Preference number: 5 (lower is better)
Translates to: TWGNQVAASSYDLRKVCSKQRRS*DGMIMC
Trigger: ACACATAATCATTCCATCCAATGATCGCCTTTGCTT...ACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAGCAACTTGATTTCCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAACCTGTGCACAGATGTaGGATAGAGAGAGAGTGGGC +
Preference number: 5 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQETCAQM*DRERVG
Trigger: GCCCACTCTCTCTCTATCCAACATCTGTGCACAGGT...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAATGCCCACAACTAGGTaGAGCTCTCAGTTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: EYNIKPETFPASLFSRKAMPTTR*SSQLGP
Trigger: TGGACCCAACTGAGAGCTCAACCTAGTTGTGGGCAT...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAACCACAGGGCTTAGAATaGGGTGGAAAAACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEPQGLE*GGKTGG
Trigger: CCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGG...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACAACATTCCCAGCCTCATaGTTTTCCAGAAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTTFPAS*FSRKAS
Trigger: AGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGT...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS TCA 90 bp ATACGGAGATTAGCACCAGACAATGACTTAGACAGAGGGCAAATATaGTATACTAGCCTCATGCCTCTTCCAGCTTATCCATCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: IRRLAPDNDLDRGQI*YTSLMPLPAYPSVC
Trigger: ACAGACTGATGGATAAGCTGGAAGAGGCATGAGGCTAGTATATCATATTTGCCCTCTGTCTAAGTCATTGTCTGGTGCTAATCTCCGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 90 bp TTTCTTTCTTCTGGCCATCCTGGAGCTGGTCTGCAAGAAGATGCCTaGTTCATAATAATTCACTCTACCGCTTCTTTTCAGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FLSSGHPGAGLQEDA*FIIIHSTASFQLAF
Trigger: AAAAGCAAGCTGAAAAGAAGCGGTAGAGTGAATTATTATGAAGCAGGCATCTTCTTGCAGACCAGCTCCAGGATGGCCAGAAGAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS-3UTR CAA 90 bp GAATATCCTAGATTCTACAACTTCCATAACTATTCATTCTCCTCCCCTTCTCTCGCTATTGCACAGGACTaGGGGAAATCAAGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: EYPRFYNFHNYSFSSPSLAIAQD*GKSSCC
Trigger: GCAGCAACTTGATTTCCCCAAGTCCTGTGCAATAGC...GAGAGAAGGGGAGGAGAATGAATAGTTATGGAAGTTGTAGAATCTAGGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp TGGGCATGCCACAATGTACGCCCAACTTTACTGGGTGATCATTTTTGTCCAAGTCTTTCTTTTATCCCTTaGAGTACAAGGAGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: WACHNVRPTLLGDHFCPSLSFIP*STRSLE
Trigger: TTCCAAGCTCCTTGTACTCAAAGGGATAAAAGAAAG...ACTTGGACAAAAATGATCACCCAGTAAAGTTGGGCGTACATTGTGGCATGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCACAAAGCCAGATACATaGCCCTCCTCCAATACAACA +
Preference number: 5 (lower is better)
Translates to: KPETFPASLFSRKASTKLTKPDT*PSSNTT
Trigger: TGTTGTATTGGAGGAGGGCAATGTATCTGGCTTTGT...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS CCA 90 bp CAATCCACGGGTGTAGTCCTAGAGTCATGGAAACAACCATCTTGTTaGAACTATTTCTTTTGGAGAACACATCTTCAAGATGTCGTGTCA +
Preference number: 5 (lower is better)
Translates to: QSTGVVLESWKQPSC*NYFFWRTHLQDVVS
Trigger: TGACACGACATCTTGAAGATGTGTTCTCCAAAAGAAATAGTTCCAACAAGATGGTTGTTTCCATGACTCTAGGACTACACCCGTGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS-3UTR CAA 90 bp TGCCTGCCTGCTCCAGTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACCCTCAATGATGAATTaGATATTCACAGGAAGATCT +
Preference number: 5 (lower is better)
Translates to: CLPAPVLLKVVQHVFKLTPSMMN*IFTGRS
Trigger: AGATCTTCCTGTGAATATCAAATTCATCATTGAGGG...TGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGACTGGAGCAGGCAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GAATACAACATAAAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCAGGGTGTCATCAATATTaGCAATCCACGGGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: EYNIKPETFPASLFSRKAGCHQY*QSTGVV
Trigger: GACTACACCCGTGGATTGCAAATATTGATGACACCC...TGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTTTATGTTGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAGGAACATTTTGGCAATaGGAATGGTGGATCCATCCC +
Preference number: 5 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEGTFWQ*EWWIHP
Trigger: GGGATGGATCCACCATTCCAATTGCCAAAATGTTCC...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATCCACAGGGCTTAGAATaGGGTGGAAAAACAGGAGGG +
Preference number: 5 (lower is better)
Translates to: DSAGMKISEYILLGNFLNPQGLE*GGKTGG
Trigger: CCCTCCTGTTTTTCCACCCAATTCTAAGCCCTGTGG...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp AGAAATTCTATCAGGATAAATTCTGCTCTGGTGCAACCTGTGCACAGATGTTGGACATTCCCAGCCTCATaGTTTTCCAGAAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: RNSIRINSALVQPVHRCWTFPAS*FSRKAS
Trigger: AGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGT...CCAACATCTGTGCACAGGTTGCACCAGAGCAGAATTTATCCTGATAGAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS CCA 90 bp GGGTGTCATCAATATTTGCAATCCACGGGTGTAGTCCTAGAGTCATaGAAACAACCATCTTGTTGGAACTATTTCTTTTGGAGAACACAT +
Preference number: 5 (lower is better)
Translates to: GCHQYLQSTGVVLES*KQPSCWNYFFWRTH
Trigger: ATGTGTTCTCCAAAAGAAATAGTTCCAACAAGATGGTTGTTTCCATGACTCTAGGACTACACCCGTGGATTGCAAATATTGATGACACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS-3UTR CAA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGAGATTGCTGGCTTCCTTaGGCTGATCCACAGGTTATC +
Preference number: 5 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGDCWLP*ADPQVI
Trigger: GATAACCTGTGGATCAGCCAAAGGAAGCCAGCAATC...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp AAGCCAGAAACATTCCCAGCCTCATTGTTTTCCAGAAAAGCATCTACCAAACTCCCCTCAATGATGAATTaGATATTCACAGGAAGATCT +
Preference number: 5 (lower is better)
Translates to: KPETFPASLFSRKASTKLPSMMN*IFTGRS
Trigger: AGATCTTCCTGTGAATATCAAATTCATCATTGAGGG...GAGTTTGGTAGATGCTTTTCTGGAAAACAATGAGGCTGGGAATGTTTCTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAATCTCCTGGAACATTTaGGCAATTGGAATGGTGGAT +
Preference number: 5 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEISWNI*AIGMVD
Trigger: ATCCACCATTCCAATTGCCAAAATGTTCCAGGAGAT...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp ATTGGATGGAATGATTATGTGTCACGAGCACTTGAGGACCTAGAAAGCAAACTGATTATGCCAATCAAATaGCAAGGTTGGAGATATGCT +
Preference number: 5 (lower is better)
Translates to: IGWNDYVSRALEDLESKLIMPIK*QGWRYA
Trigger: AGCATATCTCCAACCTTGCAATTTGATTGGCATAAT...CAGTTTGCTTTCTAGGTCCTCAAGTGCTCGTGACACATAATCATTCCATCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS TCA 90 bp TTTGCCTGTAAGGAATGTTTTCAGCTTTGTGTTTACTTAGTCCACTaGGACAATGATGTATTCACTTACAGATTAGCCCCTAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: FACKECFQLCVYLVH*DNDVFTYRLAPKAL
Trigger: AAGAGCCTTAGGGGCTAATCTGTAAGTGAATACATCATTGTCTCAGTGGACTAAGTAAACACAAAGCTGAAAACATTCCTTACAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS-3UTR CAA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAAGATATGCTAAAAGGTTaGAAGGAATCCAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: VNIVPCLSNSSENESMGKDMLKG*KESNPG
Trigger: CCCAGGATTGGATTCCTTCAAACCTTTTAGCATATC...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GTCCTTTTAAAGGTGGTACAGCACGTTTTTAAACTGACACTGACATCTCAAGAAAAGCAAAGGCGATCATaGGATGGAATGATTATGTGT +
Preference number: 5 (lower is better)
Translates to: VLLKVVQHVFKLTLTSQEKQRRS*DGMIMC
Trigger: ACACATAATCATTCCATCCAATGATCGCCTTTGCTT...TTCTTGAGATGTCAGTGTCAGTTTAAAAACGTGCTGTACCACCTTTAAAAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp ATCAAACACCTGCTGCTGTTCTTTAACGATGACTTGATATTCTATAGAATTGGATCTGGCAATCCAGGGTaGGAATATCCTAGATTCTAC +
Preference number: 5 (lower is better)
Translates to: IKHLLLFFNDDLIFYRIGSGNPG*EYPRFY
Trigger: GTAGAATCTAGGATATTCCAACCCTGGATTGCCAGA...TCCAATTCTATAGAATATCAAGTCATCGTTAAAGAACAGCAGCAGGTGTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATACAAAGCCAGATACATaGCCCTCCTCCAATACAACA +
Preference number: 5 (lower is better)
Translates to: DSAGMKISEYILLGNFLNTKPDT*PSSNTT
Trigger: TGTTGTATTGGAGGAGGGCAATGTATCTGGCTTTGT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATATCTCCTGGAACATTTaGGCAATTGGAATGGTGGAT +
Preference number: 5 (lower is better)
Translates to: DSAGMKISEYILLGNFLNISWNI*AIGMVD
Trigger: ATCCACCATTCCAATTGCCAAAATGTTCCAGGAGAT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GTTAATATAGTACCATGCCTTAGTAACTCCTCTGAAAATGAATCCATGGGGAAACTTTCTTTTATCCCTTaGAGTACAAGGAGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: VNIVPCLSNSSENESMGKLSFIP*STRSLE
Trigger: TTCCAAGCTCCTTGTACTCAAAGGGATAAAAGAAAG...TTTCCCCATGGATTCATTTTCAGAGGAGTTACTAAGGCATGGTACTATATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS-3UTR CAA 90 bp GATTCAGCAGGAATGAAGATCAGCGAATACATATTGTTGGGTAACTTCTTAAATATTATGCCAATCAAATaGCAAGGTTGGAGATATGCT +
Preference number: 5 (lower is better)
Translates to: DSAGMKISEYILLGNFLNIMPIK*QGWRYA
Trigger: AGCATATCTCCAACCTTGCAATTTGATTGGCATAAT...ATTTAAGAAGTTACCCAACAATATGTATTCGCTGATCTTCATTCCTGCTGAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS GCA 72 bp CCCATGTCCACCGAGGCCACACGGGCCCCCAGGCGCTaGAGCGTGTCCGCAGCCACGGCCATCATTCTGAAG +
Preference number: 6 (lower is better)
Translates to: PMSTEATRAPRR*SVSAATAIILK
Trigger: CTTCAGAATGATGGCCGTGGCTGCGGACACGCTGCAGCGCCTGGGGGCCCGTGTGGCCTCGGTGGACATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000585136.1
CDS TCA 72 bp GTTTCCCGTCTACCTCCGTCAGCACATAGGGGTCCGTaGGCCACCCATCGCCCCGGTCAGCAGGCTGCACGT +
Preference number: 6 (lower is better)
Translates to: VSRLPPSAHRGP*ATHRPGQQAAR
Trigger: ACGTGCAGCCTGCTGACCGGGGCGATGGGTGGCTCACGGACCCCTATGTGCTGACGGAGGTAGACGGGAAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS GCA 72 bp CAGGCTGCACGTCCAAGTGGCCGTAGAAGCACACGGTaGCTTTCGTGGGATCGCTCCCCAGTTCGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: QAARPSGRRSTR*LSWDRSPVRPG
Trigger: TCCTGGCCGAACTGGGGAGCGATCCCACGAAAGGCACCGTGTGCTTCTACGGCCACTTGGACGTGCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS GCA 72 bp GTCCTGGAGCCAGACTGTGGGAGGACTCTTCAGGGTTaGAGCAGGCCTCTTGACTGTCTGGGTCCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: VLEPDCGRTLQG*SRPLDCLGPRG
Trigger: GCCACGGGGACCCAGACAGTCAAGAGGCCTGCTGCAACCCTGAAGAGTCCTCCCACAGTCTGGCTCCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 90 bp TGGAGCCAGACTGTGGGAGGACTCTTCAGGGTTGCAGCAGGCCTCTaGACTGTCTGGGTCCCCGTGGCCAAAGCCATTGGCAGCAACTCC +
Preference number: 6 (lower is better)
Translates to: WSQTVGGLFRVAAGL*TVWVPVAKAIGSNS
Trigger: GGAGTTGCTGCCAATGGCTTTGGCCACGGGGACCCAGACAGTCAAGAGGCCTGCTGCAACCCTGAAGAGTCCTCCCACAGTCTGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS TCA 72 bp CTGTGGGAGGACTCTTCAGGGTTGCAGCAGGCCTCTTaGCTGTCTGGGTCCCCGTGGCCAAAGCCATTGGCA +
Preference number: 6 (lower is better)
Translates to: LWEDSSGLQQAS*LSGSPWPKPLA
Trigger: TGCCAATGGCTTTGGCCACGGGGACCCAGACAGTCAAGAGGCCTGCTGCAACCCTGAAGAGTCCTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp ATCGCTCCCCAGTTCGGCCAGGATGACGGGAGGTATTaGAAGACTCTGACCATCGGGCAGCTGCTGAGGACC +
Preference number: 6 (lower is better)
Translates to: IAPQFGQDDGRY*KTLTIGQLLRT
Trigger: GGTCCTCAGCAGCTGCCCGATGGTCAGAGTCTTCCAATACCTCCCGTCATCCTGGCCGAACTGGGGAGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS CCA 72 bp GGACTCTTCAGGGTTGCAGCAGGCCTCTTGACTGTCTaGGTCCCCGTGGCCAAAGCCATTGGCAGCAACTCC +
Preference number: 6 (lower is better)
Translates to: GLFRVAAGLLTV*VPVAKAIGSNS
Trigger: GGAGTTGCTGCCAATGGCTTTGGCCACGGGGACCCAGACAGTCAAGAGGCCTGCTGCAACCCTGAAGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 72 bp ACTGTGGGAGGACTCTTCAGGGTTGCAGCAGGCCTCTaGACTGTCTGGGTCCCCGTGGCCAAAGCCATTGGC +
Preference number: 6 (lower is better)
Translates to: TVGGLFRVAAGL*TVWVPVAKAIG
Trigger: GCCAATGGCTTTGGCCACGGGGACCCAGACAGTCAAGAGGCCTGCTGCAACCCTGAAGAGTCCTCCCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS TCA 72 bp TGCCTTTCGTGGGATCGCTCCCCAGTTCGGCCAGGATaGCGGGAGGTATTGGAAGACTCTGACCATCGGGCA +
Preference number: 6 (lower is better)
Translates to: CLSWDRSPVRPG*REVLEDSDHRA
Trigger: TGCCCGATGGTCAGAGTCTTCCAATACCTCCCGTCATCCTGGCCGAACTGGGGAGCGATCCCACGAAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000582365.1
CDS CAA 72 bp CGTGTCCGCAGCCACGGCCATCATTCTGAAGAGCTCTaGTCTGAAGCGAGGCACAGGCTGGACAGAGTCGCT +
Preference number: 6 (lower is better)
Translates to: RVRSHGHHSEEL*SEARHRLDRVA
Trigger: AGCGACTCTGTCCAGCCTGTGCCTCGCTTCAGACAAGAGCTCTTCAGAATGATGGCCGTGGCTGCGGACACG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000585136.1
CDS CCA 72 bp GCACAGCCAGCAGGGACGCAGCCATTCTCCCGAGTTTaGGATCCATTAGGCTGGAGTTCTGAAGCCTCTAGC +
Preference number: 6 (lower is better)
Translates to: AQPAGTQPFSRV*DPLGWSSEASS
Trigger: GCTAGAGGCTTCAGAACTCCAGCCTAATGGATCCCAAACTCGGGAGAATGGCTGCGTCCCTGCTGGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000585136.1
CDS TCA 72 bp CCCCAAGAGGGTGACATTAAATATCTCTCTGTGCCCTaGCCCACGTTGTCCCCCGGAAGGAAGACGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PQEGDIKYLSVP*PTLSPGRKTRL
Trigger: CAGCCTCGTCTTCCTTCCGGGGGACAACGTGGGTCAGGGCACAGAGAGATATTTAATGTCACCCTCTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000585136.1
CDS CCA 72 bp ATTCTGAAGAGCTCTTGTCTGAAGCGAGGCACAGGCTaGACAGAGTCGCTCTCGATGGCCACCCACTCCTTC +
Preference number: 6 (lower is better)
Translates to: ILKSSCLKRGTG*TESLSMATHSF
Trigger: GAAGGAGTGGGTGGCCATCGAGAGCGACTCTGTCCAGCCTGTGCCTCGCTTCAGACAAGAGCTCTTCAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000585136.1
CDS CAA 90 bp TTCACAGGAAGATCTTGCTCCAGGGCTCTGAAGGCGCTCACAGCATaGATCCAAGCCAAGACAGGGCCTTTGTTGTCGGTCGCTCCTCGT +
Preference number: 6 (lower is better)
Translates to: FTGRSCSRALKALTA*IQAKTGPLLSVAPR
Trigger: ACGAGGAGCGACCGACAACAAAGGCCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCTTCAGAGCCCTGGAGCAAGATCTTCCTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000584316.5
ENST00000585136.1
CDS CCA 72 bp TGGCCACCCACTCCTTCAGCGTCATTCTCCCGAGTTTaGGATCCATTAGGCTGGAGTTCTGAAGCCTCTAGC +
Preference number: 6 (lower is better)
Translates to: WPPTPSASFSRV*DPLGWSSEASS
Trigger: GCTAGAGGCTTCAGAACTCCAGCCTAATGGATCCCAAACTCGGGAGAATGACGCTGAAGGAGTGGGTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582365.1
CDS CCA 72 bp AGCCAGGTAGAAAGGAGTGTGCCAATGTTGTGGTCCTaGAGCCAGACTGTGGGAGGACTCTTCAGGGTTGCA +
Preference number: 6 (lower is better)
Translates to: SQVERSVPMLWS*SQTVGGLFRVA
Trigger: TGCAACCCTGAAGAGTCCTCCCACAGTCTGGCTCCAGGACCACAACATTGGCACACTCCTTTCTACCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 72 bp AGATCTTGCTCCAGGGCTCTGAAGGCGCTCACAGCATaGATCCAAGCCAAGACAGGGCCTTTGTTGTCGGTC +
Preference number: 6 (lower is better)
Translates to: RSCSRALKALTA*IQAKTGPLLSV
Trigger: GACCGACAACAAAGGCCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCTTCAGAGCCCTGGAGCAAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000584316.5
ENST00000585136.1
CDS CAA 90 bp CACCAGGATCACGCAGCTGGAGTCCGCCCTGCTTTAGTGTTCACCTaGTCAAAGGTGTGGCTGAAAACACCTGGGCCTGCAACAAATGAG +
Preference number: 6 (lower is better)
Translates to: HQDHAAGVRPALVFT*SKVWLKTPGPATNE
Trigger: CTCATTTGTTGCAGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGACTCCAGCTGCGTGATCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 72 bp GAAAGCCCCAAGAGGGTGACATTAAATATCTCTCTGTaGCCTGACCCACGTTGTCCCCCGGAAGGAAGACGA +
Preference number: 6 (lower is better)
Translates to: ESPKRVTLNISL*PDPRCPPEGRR
Trigger: TCGTCTTCCTTCCGGGGGACAACGTGGGTCAGGGCACAGAGAGATATTTAATGTCACCCTCTTGGGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000585136.1
CDS CCA 72 bp ACGCAGCCATTCTCCCGAGTTTGGGATCCATTAGGCTaGAGTTCTGAAGCCTCTAGCAACTTTCCCAACCTC +
Preference number: 6 (lower is better)
Translates to: TQPFSRVWDPLG*SSEASSNFPNL
Trigger: GAGGTTGGGAAAGTTGCTAGAGGCTTCAGAACTCCAGCCTAATGGATCCCAAACTCGGGAGAATGGCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358821.8
ENST00000585136.1
CDS CCA 72 bp GTCCGCCCTGCTTTAGTGTTCACCTTGTCAAAGGTGTaGCTGAAAACACCTGGGCCTGCAACAAATGAGGTC +
Preference number: 6 (lower is better)
Translates to: VRPALVFTLSKV*LKTPGPATNEV
Trigger: GACCTCATTTGTTGCAGGCCCAGGTGTTTTCAGCCACACCTTTGACAAGGTGAACACTAAAGCAGGGCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS TCA 72 bp CTCCCAGTCTGGACGATTTTCCATTCTCACATAAATTaGACAGGAGCTCACCCACGTGTAGACCCGGGTGTG +
Preference number: 6 (lower is better)
Translates to: LPVWTIFHSHIN*TGAHPRVDPGV
Trigger: CACACCCGGGTCTACACGTGGGTGAGCTCCTGTTCAATTTATGTGAGAATGGAAAATCGTCCAGACTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp TCAGCGTCATTCTCCCGAGTTTGGGATCCATTAGGCTaGAGTTCTGAAGCCTCTAGCAACTTTCCCAACCTC +
Preference number: 6 (lower is better)
Translates to: SASFSRVWDPLG*SSEASSNFPNL
Trigger: GAGGTTGGGAAAGTTGCTAGAGGCTTCAGAACTCCAGCCTAATGGATCCCAAACTCGGGAGAATGACGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582365.1
CDS CAA 72 bp CTACCAGGCTACCGAGAAGAGCAACCAGATCAGCCATaGGTTCATGAAGGATGCCACCAAAGGTTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: LPGYREEQPDQP*VHEGCHQRFLS
Trigger: ACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGTAGCCTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000584004.5
CDS CAA 72 bp AGAAAACAAAGCCAGGTAGAAAGGAGTGTGCCAATGTaGTGGTCCTGGAGCCAGACTGTGGGAGGACTCTTC +
Preference number: 6 (lower is better)
Translates to: RKQSQVERSVPM*WSWSQTVGGLF
Trigger: GAAGAGTCCTCCCACAGTCTGGCTCCAGGACCACAACATTGGCACACTCCTTTCTACCTGGCTTTGTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 90 bp CAGACGAGTCTACCAGGCTACCGAGAAGAGCAACCAGATCAGCCATaGGTTCATGAAGGATGCCACCAAAGGTTCCTGAGTGAAAATCCT +
Preference number: 6 (lower is better)
Translates to: QTSLPGYREEQPDQP*VHEGCHQRFLSENP
Trigger: AGGATTTTCACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTCGGTAGCCTGGTAGACTCGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000584004.5
CDS TCA 72 bp AAAGGTGTGGCTGAAAACACCTGGGCCTGCAACAAATaGGGTCGGAGTGAGTTACCTGCATCATGTTCACGT +
Preference number: 6 (lower is better)
Translates to: KGVAENTWACNK*GRSELPASCSR
Trigger: ACGTGAACATGATGCAGGTAACTCACTCCGACCTCATTTGTTGCAGGCCCAGGTGTTTTCAGCCACACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS TCA 72 bp AAGGACTGGTTGATCCAGCCCACGGGGAAGTGGCTGTaGATGTCAAAAATATGCCTGGGAATTCACATCTGC +
Preference number: 6 (lower is better)
Translates to: KDWLIQPTGKWL*MSKICLGIHIC
Trigger: GCAGATGTGAATTCCCAGGCATATTTTTGACATTCACAGCCACTTCCCCGTGGGCTGGATCAACCAGTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp GCACCACGCTCTTGTGGACGATCTCCTGGAACATTTTaGCAATTGGAATGGTGGATCCATCCCGGATCATAT +
Preference number: 6 (lower is better)
Translates to: APRSCGRSPGTF*QLEWWIHPGSY
Trigger: ATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CCA 72 bp AGCGGAATTAGCACCACGCTCTTGTGGACGATCTCCTaGAACATTTTGGCAATTGGAATGGTGGATCCATCC +
Preference number: 6 (lower is better)
Translates to: SGISTTLLWTIS*NILAIGMVDPS
Trigger: GGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAATTCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CCA 72 bp TCAACAGCTCCCAGCGGAATTAGCACCACGCTCTTGTaGACGATCTCCTGGAACATTTTGGCAATTGGAATG +
Preference number: 6 (lower is better)
Translates to: STAPSGISTTLL*TISWNILAIGM
Trigger: CATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAATTCCGCTGGGAGCTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 72 bp AGCACCACGCTCTTGTGGACGATCTCCTGGAACATTTaGGCAATTGGAATGGTGGATCCATCCCGGATCATA +
Preference number: 6 (lower is better)
Translates to: STTLLWTISWNI*AIGMVDPSRII
Trigger: TATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 72 bp TCATCAACAGCTCCCAGCGGAATTAGCACCACGCTCTaGTGGACGATCTCCTGGAACATTTTGGCAATTGGA +
Preference number: 6 (lower is better)
Translates to: SSTAPSGISTTL*WTISWNILAIG
Trigger: TCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAATTCCGCTGGGAGCTGTTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 90 bp AGCGGAATTAGCACCACGCTCTTGTGGACGATCTCCTGGAACATTTaGGCAATTGGAATGGTGGATCCATCCCGGATCATATCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: SGISTTLLWTISWNI*AIGMVDPSRIISGS
Trigger: AGAACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAATTCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 90 bp TGTTCTCCATCATCAACAGCTCCCAGCGGAATTAGCACCACGCTCTaGTGGACGATCTCCTGGAACATTTTGGCAATTGGAATGGTGGAT +
Preference number: 6 (lower is better)
Translates to: CSPSSTAPSGISTTL*WTISWNILAIGMVD
Trigger: ATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAATTCCGCTGGGAGCTGTTGATGATGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS GCA 72 bp CACTACCCATCACTACCAATGCTCCCCATTGATGAGTaGCCCTCTTTGCCCAAGATCTGCAGTTTTCAGTTA +
Preference number: 6 (lower is better)
Translates to: HYPSLPMLPIDE*PSLPKICSFQL
Trigger: TAACTGAAAACTGCAGATCTTGGGCAAAGAGGGGCACTCATCAATGGGGAGCATTGGTAGTGATGGGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 72 bp CATTCAGGACACGTTAACTGTCACCTTACTCAGCTGTaGCTCACGCAAGGACTTTTTCCTCAGGACACAAAC +
Preference number: 6 (lower is better)
Translates to: HSGHVNCHLTQL*LTQGLFPQDTN
Trigger: GTTTGTGTCCTGAGGAAAAAGTCCTTGCGTGAGGCACAGCTGAGTAAGGTGACAGTTAACGTGTCCTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp GCTCTTGTGGACGATCTCCTGGAACATTTTGGCAATTaGAATGGTGGATCCATCCCGGATCATATCTGGTTC +
Preference number: 6 (lower is better)
Translates to: ALVDDLLEHFGN*NGGSIPDHIWF
Trigger: GAACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CCA 72 bp TTTGGAAAACATGGCTGGGAAATGGGTAACTGCTTGTaGTTAAGTGCCAGAAGCCAGTGCCAATTAGACGCC +
Preference number: 6 (lower is better)
Translates to: FGKHGWEMGNCL*LSARSQCQLDA
Trigger: GGCGTCTAATTGGCACTGGCTTCTGGCACTTAACCACAAGCAGTTACCCATTTCCCAGCCATGTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp TTATCCAAAGGATGCTTAATTAGAACCCAGTGGACCTaGGTTGCTTGTGTTACCACCCTCTGCCTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: LSKGCLIRTQWT*VACVTTLCLSE
Trigger: CTCAGAGAGGCAGAGGGTGGTAACACAAGCAACCCAGGTCCACTGGGTTCTAATTAAGCATCCTTTGGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 72 bp CGCTCTTGTGGACGATCTCCTGGAACATTTTGGCAATaGGAATGGTGGATCCATCCCGGATCATATCTGGTT +
Preference number: 6 (lower is better)
Translates to: RSCGRSPGTFWQ*EWWIHPGSYLV
Trigger: AACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 90 bp TTAGCACCACGCTCTTGTGGACGATCTCCTGGAACATTTTGGCAATaGGAATGGTGGATCCATCCCGGATCATATCTGGTTCTGTTCCAA +
Preference number: 6 (lower is better)
Translates to: LAPRSCGRSPGTFWQ*EWWIHPGSYLVLFQ
Trigger: TTGGAACAGAACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS TCA 72 bp AGGAAGAAGAGAGAGGCACATTGCACAGGCATCAGCTaGCCTGTTGATTTTCTCATTCTGCGAATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: RKKREAHCTGIS*PVDFLILRMFS
Trigger: GGAGAACATTCGCAGAATGAGAAAATCAACAGGTCAGCTGATGCCTGTGCAATGTGCCTCTCTCTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 72 bp TCTGGCCATCCTGGAGCTGGTCTGCAAGAAGATGCCTaGTTCATAATAATTCACTCTACCGCTTCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: SGHPGAGLQEDA*FIIIHSTASFQ
Trigger: CTGAAAAGAAGCGGTAGAGTGAATTATTATGAAGCAGGCATCTTCTTGCAGACCAGCTCCAGGATGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp GGACGATCTCCTGGAACATTTTGGCAATTGGAATGGTaGATCCATCCCGGATCATATCTGGTTCTGTTCCAA +
Preference number: 6 (lower is better)
Translates to: GRSPGTFWQLEW*IHPGSYLVLFQ
Trigger: TTGGAACAGAACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CCA 72 bp TGTGGACGATCTCCTGGAACATTTTGGCAATTGGAATaGTGGATCCATCCCGGATCATATCTGGTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: CGRSPGTFWQLE*WIHPGSYLVLF
Trigger: GAACAGAACCAGATATGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 72 bp AGCTTTGGAAAACATGGCTGGGAAATGGGTAACTGCTaGTGGTTAAGTGCCAGAAGCCAGTGCCAATTAGAC +
Preference number: 6 (lower is better)
Translates to: SFGKHGWEMGNC*WLSARSQCQLD
Trigger: GTCTAATTGGCACTGGCTTCTGGCACTTAACCACAAGCAGTTACCCATTTCCCAGCCATGTTTTCCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS TCA 72 bp GAGAGAGGCACATTGCACAGGCATCAGCTGACCTGTTaGTTTTCTCATTCTGCGAATGTTCTCCATCATCAA +
Preference number: 6 (lower is better)
Translates to: ERGTLHRHQLTC*FSHSANVLHHQ
Trigger: TTGATGATGGAGAACATTCGCAGAATGAGAAAATCAACAGGTCAGCTGATGCCTGTGCAATGTGCCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 72 bp AACAGCTTTGGAAAACATGGCTGGGAAATGGGTAACTaGTTGTGGTTAAGTGCCAGAAGCCAGTGCCAATTA +
Preference number: 6 (lower is better)
Translates to: NSFGKHGWEMGN*LWLSARSQCQL
Trigger: TAATTGGCACTGGCTTCTGGCACTTAACCACAAGCAGTTACCCATTTCCCAGCCATGTTTTCCAAAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 72 bp TTCTTCTGGCCATCCTGGAGCTGGTCTGCAAGAAGATaGCTGCTTCATAATAATTCACTCTACCGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: FFWPSWSWSARR*LLHNNSLYRFF
Trigger: AAAGAAGCGGTAGAGTGAATTATTATGAAGCAGGCATCTTCTTGCAGACCAGCTCCAGGATGGCCAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp CCACGGGGAAGTGGCTGTGAATGTCAAAAATATGCCTaGGAATTCACATCTGCTTTGGATTCTAAGATACGG +
Preference number: 6 (lower is better)
Translates to: PRGSGCECQKYA*EFTSALDSKIR
Trigger: CCGTATCTTAGAATCCAAAGCAGATGTGAATTCCCAGGCATATTTTTGACATTCACAGCCACTTCCCCGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 72 bp AGAGAGAGGCACATTGCACAGGCATCAGCTGACCTGTaGATTTTCTCATTCTGCGAATGTTCTCCATCATCA +
Preference number: 6 (lower is better)
Translates to: RERHIAQASADL*IFSFCECSPSS
Trigger: TGATGATGGAGAACATTCGCAGAATGAGAAAATCAACAGGTCAGCTGATGCCTGTGCAATGTGCCTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 90 bp TTAATGAACAGCTTTGGAAAACATGGCTGGGAAATGGGTAACTGCTaGTGGTTAAGTGCCAGAAGCCAGTGCCAATTAGACGCCATTGAA +
Preference number: 6 (lower is better)
Translates to: LMNSFGKHGWEMGNC*WLSARSQCQLDAIE
Trigger: TTCAATGGCGTCTAATTGGCACTGGCTTCTGGCACTTAACCACAAGCAGTTACCCATTTCCCAGCCATGTTTTCCAAAGCTGTTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp AACACTGTTCTGATCGCTCTTTTTGCTGCGAGATACTaGGTGTCATCAATATTTGCAATCCACGGGTGTAGT +
Preference number: 6 (lower is better)
Translates to: NTVLIALFAARY*VSSIFAIHGCS
Trigger: ACTACACCCGTGGATTGCAAATATTGATGACACCCAGTATCTCGCAGCAAAAAGAGCGATCAGAACAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CCA 72 bp TTCTTGGTCTTTGAAAAGGTAAGAAGTCCAGCTCACTaGCTGAAGGCTGACGTGGGATTTAGGTTAATGAAC +
Preference number: 6 (lower is better)
Translates to: FLVFEKVRSPAH*LKADVGFRLMN
Trigger: GTTCATTAACCTAAATCCCACGTCAGCCTTCAGCCAGTGAGCTGGACTTCTTACCTTTTCAAAGACCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 72 bp CTCTTTTTGCTGCGAGATACTGGGTGTCATCAATATTaGCAATCCACGGGTGTAGTCCTAGAGTCATGGAAA +
Preference number: 6 (lower is better)
Translates to: LFLLRDTGCHQY*QSTGVVLESWK
Trigger: TTTCCATGACTCTAGGACTACACCCGTGGATTGCAAATATTGATGACACCCAGTATCTCGCAGCAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS TCA 72 bp TTAGCACCAGACAATGACTTAGACAGAGGGCAAATATaGTATACTAGCCTCATGCCTCTTCCAGCTTATCCA +
Preference number: 6 (lower is better)
Translates to: LAPDNDLDRGQI*YTSLMPLPAYP
Trigger: TGGATAAGCTGGAAGAGGCATGAGGCTAGTATATCATATTTGCCCTCTGTCTAAGTCATTGTCTGGTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CCA 72 bp GGATTTAGGTTAATGAACAGCTTTGGAAAACATGGCTaGGAAATGGGTAACTGCTTGTGGTTAAGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: GFRLMNSFGKHG*EMGNCLWLSAR
Trigger: TCTGGCACTTAACCACAAGCAGTTACCCATTTCCCAGCCATGTTTTCCAAAGCTGTTCATTAACCTAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS GCA 72 bp TTCTGTTCCAAACACTGTTCTGATCGCTCTTTTTGCTaGGAGATACTGGGTGTCATCAATATTTGCAATCCA +
Preference number: 6 (lower is better)
Translates to: FCSKHCSDRSFC*EILGVINICNP
Trigger: TGGATTGCAAATATTGATGACACCCAGTATCTCGCAGCAAAAAGAGCGATCAGAACAGTGTTTGGAACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 72 bp CACGGGTGTAGTCCTAGAGTCATGGAAACAACCATCTaGTTGGAACTATTTCTTTTGGAGAACACATCTTCA +
Preference number: 6 (lower is better)
Translates to: HGCSPRVMETTI*LELFLLENTSS
Trigger: TGAAGATGTGTTCTCCAAAAGAAATAGTTCCAACAAGATGGTTGTTTCCATGACTCTAGGACTACACCCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 90 bp AGTCCTAGAGTCATGGAAACAACCATCTTGTTGGAACTATTTCTTTaGGAGAACACATCTTCAAGATGTCGTGTCACCTGTTTTTCCACC +
Preference number: 6 (lower is better)
Translates to: SPRVMETTILLELFL*ENTSSRCRVTCFST
Trigger: GGTGGAAAAACAGGTGACACGACATCTTGAAGATGTGTTCTCCAAAAGAAATAGTTCCAACAAGATGGTTGTTTCCATGACTCTAGGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 90 bp TTTGCAATCCACGGGTGTAGTCCTAGAGTCATGGAAACAACCATCTaGTTGGAACTATTTCTTTTGGAGAACACATCTTCAAGATGTCGT +
Preference number: 6 (lower is better)
Translates to: FAIHGCSPRVMETTI*LELFLLENTSSRCR
Trigger: ACGACATCTTGAAGATGTGTTCTCCAAAAGAAATAGTTCCAACAAGATGGTTGTTTCCATGACTCTAGGACTACACCCGTGGATTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 90 bp AGTGGCTGTGAATGTCAAAAATATGCCTGGGAATTCACATCTGCTTaGGATTCTAAGATACGGAGATTAGCACCAGACAATGACTTAGAC +
Preference number: 6 (lower is better)
Translates to: SGCECQKYAWEFTSA*DSKIRRLAPDNDLD
Trigger: GTCTAAGTCATTGTCTGGTGCTAATCTCCGTATCTTAGAATCCAAAGCAGATGTGAATTCCCAGGCATATTTTTGACATTCACAGCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 72 bp GTCATGGAAACAACCATCTTGTTGGAACTATTTCTTTaGGAGAACACATCTTCAAGATGTCGTGTCACCTGT +
Preference number: 6 (lower is better)
Translates to: VMETTILLELFL*ENTSSRCRVTC
Trigger: ACAGGTGACACGACATCTTGAAGATGTGTTCTCCAAAAGAAATAGTTCCAACAAGATGGTTGTTTCCATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CCA 72 bp GGTGTAGTCCTAGAGTCATGGAAACAACCATCTTGTTaGAACTATTTCTTTTGGAGAACACATCTTCAAGAT +
Preference number: 6 (lower is better)
Translates to: GVVLESWKQPSC*NYFFWRTHLQD
Trigger: ATCTTGAAGATGTGTTCTCCAAAAGAAATAGTTCCAACAAGATGGTTGTTTCCATGACTCTAGGACTACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358821.8
ENST00000582365.1
ENST00000582461.1
ENST00000584004.5
CDS CAA 72 bp GAATGTCAAAAATATGCCTGGGAATTCACATCTGCTTaGGATTCTAAGATACGGAGATTAGCACCAGACAAT +
Preference number: 6 (lower is better)
Translates to: ECQKYAWEFTSA*DSKIRRLAPDN
Trigger: ATTGTCTGGTGCTAATCTCCGTATCTTAGAATCCAAAGCAGATGTGAATTCCCAGGCATATTTTTGACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS TCA 72 bp AAGGAATGTTTTCAGCTTTGTGTTTACTTAGTCCACTaGGACAATGATGTATTCACTTACAGATTAGCCCCT +
Preference number: 6 (lower is better)
Translates to: KECFQLCVYLVH*DNDVFTYRLAP
Trigger: AGGGGCTAATCTGTAAGTGAATACATCATTGTCTCAGTGGACTAAGTAAACACAAAGCTGAAAACATTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 72 bp TTATCACTGATATGGATATCAGGGTCAAACAATTTCTaGTTTCTCAGTAGTCTGGGATGCTTAGGAGATCTT +
Preference number: 6 (lower is better)
Translates to: LSLIWISGSNNF*FLSSLGCLGDL
Trigger: AAGATCTCCTAAGCATCCCAGACTACTGAGAAACAAGAAATTGTTTGACCCTGATATCCATATCAGTGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582461.1
CDS CAA 90 bp CTTGATTTCTTATCACTGATATGGATATCAGGGTCAAACAATTTCTaGTTTCTCAGTAGTCTGGGATGCTTAGGAGATCTTGTAGTATCT +
Preference number: 6 (lower is better)
Translates to: LDFLSLIWISGSNNF*FLSSLGCLGDLVVS
Trigger: AGATACTACAAGATCTCCTAAGCATCCCAGACTACTGAGAAACAAGAAATTGTTTGACCCTGATATCCATATCAGTGATAAGAAATCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582461.1