RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNBP (Homo sapiens)

Ensembl gene IDs: ENSG00000169714

Ensembl transcript IDs: ENST00000422453.7, ENST00000441626.6, ENST00000446936.6, ENST00000451728.6, ENST00000500450.6, ENST00000502372.1, ENST00000502976.5, ENST00000504813.5, ENST00000507573.1, ENST00000512338.1

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTATGTTATTACCTCTTTTTCTTGCTTGCTCAGGACTATTAATTTaGCAAGGTTGGAATGTGCACAGCACAGCTGAGACACCACCATTT +
Preference number: 1 (lower is better)
Translates to: GMLLPLFLACSGLLI*QGWNVHSTAETPPF
Trigger: AAATGGTGGTGTCTCAGCTGTGCTGTGCACATTCCAACCTTGTCAAATTAATAGTCCTGAGCAAGCAAGAAAAAGAGGTAATAACATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422453.7
3UTR-3UTR GCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCCACTGGCCTGGGAGTTaGCTCTATCTGCCAACCTTT +
Preference number: 2 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIHWPGS*LYLPTF
Trigger: AAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTG...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG +
Preference number: 2 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPLSANL*PVKRIQ
Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR GCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTGGAGTTGCCTCTATCTaGCAACCTTTGGCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: FTSGTERGFFNKALYITPGVASI*QPLASE
Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCC...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG +
Preference number: 2 (lower is better)
Translates to: IHQSLFTSGTERGFFNKALSANL*PVKRIQ
Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR GCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGGAGTTGCCTCTATCTaGCAACCTTTGGCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHGVASI*QPLASE
Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCC...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR GCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCGGAGTTGCCTCTATCTaGCAACCTTTGGCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAGVASI*QPLASE
Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCC...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATACTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG +
Preference number: 2 (lower is better)
Translates to: SLFTSGTERGFFNKALYILSANL*PVKRIQ
Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAIPIHQ*HGKGVL
Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCCAGGACGGGCTTACTaGTCTGACTCAACTCTTCCC +
Preference number: 2 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLPGRAY*SDSTLP
Trigger: GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGG...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: FTSGTERGFFNKALYITPPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR GCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCACTGGCCTGGGAGTTaGCTCTATCTGCCAACCTTT +
Preference number: 2 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLHWPGS*LYLPTF
Trigger: AAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTG...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTACGGGCTTACTGGTCTaGCTCAACTCTTCCCATTCA +
Preference number: 2 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLTGLLV*LNSSHS
Trigger: TGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGT...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
3UTR-3UTR TCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGACGGGCTTACTGGTCTaGCTCAACTCTTCCCATTCA +
Preference number: 2 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLTGLLV*LNSSHS
Trigger: TGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGT...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR CAA 90 bp TTTGCCATCACCATCTATGTGTCCAACATCAACACTGTGATGAAGTaGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCAT +
Preference number: 2 (lower is better)
Translates to: FAITIYVSNINTVMK*FLFRLLFRFLSNSH
Trigger: ATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACAACTTCATCACAGTGTTGATGTTGGACACATAGATGGTGATGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGCTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG +
Preference number: 2 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRLSANL*PVKRIQ
Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTATTTAATAGCTACTaGGGTCAGACAATCCAAGAC +
Preference number: 2 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRALFNSY*GQTIQD
Trigger: GTCTTGGATTGTCTGACCTCAGTAGCTATTAAATAA...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGGTTCTATGTAGGGCCTaGTACAGATGTTACTTGATG +
Preference number: 2 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLVLCRA*YRCYLM
Trigger: CATCAAGTAACATCTGTATCAGGCCCTACATAGAAC...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR TCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTTATTTAATAGCTACTaGGGTCAGACAATCCAAGAC +
Preference number: 2 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPLFNSY*GQTIQD
Trigger: GTCTTGGATTGTCTGACCTCAGTAGCTATTAAATAA...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCTCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPSLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATTCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHSLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCTCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 3 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFISICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATTCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 3 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHSICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATATCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: SLFTSGTERGFFNKALYISLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR TCA 72 bp AACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTaGCTCAACTCTTCCCATTCATCAATCCCTATTCAC +
Preference number: 3 (lower is better)
Translates to: NMFKEPRTGLLV*LNSSHSSIPIH
Trigger: GTGAATAGGGATTGATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPSLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTTCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 3 (lower is better)
Translates to: FTSGTERGFFNKALYITPSICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 3 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRASICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
3UTR-3UTR CAA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGTCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 3 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLSICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGACTCGGACGCAGGCCTaGGGAAGACGGCTCGCAAGG +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQTRTQA*GRRLAR
Trigger: CCTTGCGAGCCGTCTTCCCCAGGCCTGCGTCCGAGT...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCCGTGCAAGGTGCCCTaGCTCGCCACAGCGGTAACA +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQPCKVP*LATAVT
Trigger: TGTTACCGCTGTGGCGAGTCAGGGCACCTTGCACGG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCCGCCACACGCGGGTCTaGACACGGCCCCACATACGC +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIRHTRV*TRPHIR
Trigger: GCGTATGTGGGGCCGTGTGCAGACCCGCGTGTGGCG...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504813.5
CDS-3UTR CCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAACTCGGACGCAGGCCTaGGGAAGACGGCTCGCAAGG +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSTRTQA*GRRLAR
Trigger: CCTTGCGAGCCGTCTTCCCCAGGCCTGCGTCCGAGT...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCCCGTGCAAGGTGCCCTaGCTCGCCACAGCGGTAACA +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPPCKVP*LATAVT
Trigger: TGTTACCGCTGTGGCGAGTCAGGGCACCTTGCACGG...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCATTGAGGGTCCTTGCCTaGGCCACACGCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSLRVLA*ATRGSA
Trigger: TGCAGACCCGCGTGTGGCGCAGGCAAGGACCCTCAA...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCCATTCCCGTGCAAGGTaGCCTGACTCGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPHSRAR*PDSPQR
Trigger: CCGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATG...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCCCGTGCAAGGTGCCCTaGCTCGCCACAGCGGTAACA +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIPCKVP*LATAVT
Trigger: TGTTACCGCTGTGGCGAGTCAGGGCACCTTGCACGG...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTGAGGGTCCTTGCCTaGGCCACACGCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPLRVLA*ATRGSA
Trigger: TGCAGACCCGCGTGTGGCGCAGGCAAGGACCCTCAA...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCGCAGTGAGCCAAGCCTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIAVSQA*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGGCTTGGCTCACTGC...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR CCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAACTCGGACGCAGGCCTaGGGAAGACGGCTCGCAAGG +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKTRTQA*GRRLAR
Trigger: CCTTGCGAGCCGTCTTCCCCAGGCCTGCGTCCGAGT...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCACATTCCCGGGCCCAGTaGCCAGATCGTCCACACTTG +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSHSRAQ*PDRPHL
Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATG...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGACATTCCCGGGCCCAGTaGCCAGATCGTCCACACTTG +
Preference number: 4 (lower is better)
Translates to: AWELPLSANLWPVKRIQRHSRAQ*PDRPHL
Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATG...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAAGGTGGAGGTTGCAGTaGGCCAAGCCTGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPRWRLQ*AKPALQ
Trigger: CTGGAGTGCAGGCTTGGCTCACTGCAACCTCCACCT...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR GCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCATATTTTGAGGGTCCTTaGCTGCGCCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSYFEGP*LRHTRV
Trigger: GACCCGCGTGTGGCGCAGGCAAGGACCCTCAAAATA...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCTATTTTGAGGGTCCTTaGCTGCGCCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPYFEGP*LRHTRV
Trigger: GACCCGCGTGTGGCGCAGGCAAGGACCCTCAAAATA...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCCAGGACGGGCTTACTaGTCTGACTCAACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQPGRAY*SDSTLP
Trigger: GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATATTTTGAGGGTCCTTaGCTGCGCCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPYFEGP*LRHTRV
Trigger: GACCCGCGTGTGGCGCAGGCAAGGACCCTCAAAATA...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCTATTTTGAGGGTCCTTaGCTGCGCCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIYFEGP*LRHTRV
Trigger: GACCCGCGTGTGGCGCAGGCAAGGACCCTCAAAATA...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPLSWAP*SPWQCG
Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGGCATTTCTGCTCATCTaGATGGTCGCAGTCACGAGC +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQAFLLI*MVAVTS
Trigger: GCTCGTGACTGCGACCATGCAGATGAGCAGAAATGC...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCACTGGCCTGGGAGTTaGCTCTATCTGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQHWPGS*LYLPTF
Trigger: AAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSAPCSP*QCGHLY
Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPALALS*APCSPW
Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIALALS*APCSPW
Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAGAGGCTGTTTATTTTaGGGGTCCTTGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: AWELPLSANLWPVKRIQRRGCLF*GSLPAP
Trigger: TGGCGCAGGCAAGGACCCTCAAAATAAACAGCCTCT...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAGAGGCTGTTTATTTTaGGGGTCCTTGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPRGCLF*GSLPAP
Trigger: TGGCGCAGGCAAGGACCCTCAAAATAAACAGCCTCT...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCCAATCCTTGGCAAGATaGCCAGACTCACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPQSLAR*PDSPQR
Trigger: TCGCTGTGGTGAGTCTGGTCATCTTGCCAAGGATTG...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCACAATCCTTGGCAAGATaGCCAGACTCACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSQSLAR*PDSPQR
Trigger: TCGCTGTGGTGAGTCTGGTCATCTTGCCAAGGATTG...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQHSGNS*LHLSCC
Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGACGGGCTTACTGGTCTaGCTCAACTCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQTGLLV*LNSSHS
Trigger: TGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGT...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCAGGCTTCATCCTCCTaGAGATCACAATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQQASSS*RSQSLA
Trigger: TGCCAAGGATTGTGATCTTCAGGAGGATGAAGCCTG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451728.6
CDS-3UTR GCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAATTGCTGCTCATGGCTaGAGTCAGATCTTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSIAAHG*SQIFRV
Trigger: GACGCGGAAGATCTGACTGCAGCCATGAGCAGCAAT...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPLSWAP*SPWQCG
Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCCAGATGGCCTGGTTTaGCACAGTTGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQPDGLV*HSCSSI
Trigger: AATGCTGCTACAACTGTGGCAAACCAGGCCATCTGG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCGCATTTCTGCTCATCTaGATGGTCGCAGTCACGAGC +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPAFLLI*MVAVTS
Trigger: GCTCGTGACTGCGACCATGCAGATGAGCAGAAATGC...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCAACTCGGACGCAGGCCTaGGGAAGACGGCTCGCAAGG +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKATRTQA*GRRLAR
Trigger: CCTTGCGAGCCGTCTTCCCCAGGCCTGCGTCCGAGT...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCACAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSQSLAM*PPLPQL
Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCTTCTGCTCATCTGCATaGTCGCAGTCACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPFCSSA*SQSRAR
Trigger: TCTGGCTCGTGACTGCGACCATGCAGATGAGCAGAA...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACCAGGACGGGCTTACTaGTCTGACTCAACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPPGRAY*SDSTLP
Trigger: GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGG...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACAATCCTTGGCAAGATaGCCAGACTCACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPQSLAR*PDSPQR
Trigger: TCGCTGTGGTGAGTCTGGTCATCTTGCCAAGGATTG...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACCGTGCAAGGTGCCCTaGCTCGCCACAGCGGTAACA +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAPCKVP*LATAVT
Trigger: TGTTACCGCTGTGGCGAGTCAGGGCACCTTGCACGG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACGGGCTTACTGGTCTaGCTCAACTCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPTGLLV*LNSSHS
Trigger: TGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGT...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGGCTTCAACATCCTCCTaGAGATCACAATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQASTSS*RSQSLA
Trigger: TGCCAAGGATTGTGATCTTCAGGAGGATGTTGAAGC...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441626.6
ENST00000446936.6
CDS-3UTR GCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCCCAGATGGCCTGGTTTaGCACAGTTGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPPDGLV*HSCSSI
Trigger: AATGCTGCTACAACTGTGGCAAACCAGGCCATCTGG...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACATTCCCGTGCAAGGTaGCCTGACTCGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAHSRAR*PDSPQR
Trigger: CCGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACACTGGCCTGGGAGTTaGCTCTATCTGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPHWPGS*LYLPTF
Trigger: AAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTG...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKAPCSP*QCGHLY
Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPIPIHQ*HGKGVL
Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAAAACCCAGGAAAAGGTaGGGCACAGTGGCTCACCTG +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKKPRKR*GTVAHL
Trigger: CAGGTGAGCCACTGTGCCCCACCTTTTCCTGGGTTT...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR TCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAAGAGGCTGTTTATTTTaGGGGTCCTTGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKRGCLF*GSLPAP
Trigger: TGGCGCAGGCAAGGACCCTCAAAATAAACAGCCTCT...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACAGATCGTCCACACTTaGAGCACTCATTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPQIVHT*STHCCS
Trigger: TGAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTG...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCCAGTTGATGGCTACATaGCCAGTTTCACCACACCTA +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPQLMAT*PVSPHL
Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAACTG...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGACAGTTGATGGCTACATaGCCAGTTTCACCACACCTA +
Preference number: 4 (lower is better)
Translates to: AWELPLSANLWPVKRIQRQLMAT*PVSPHL
Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAACTG...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPHSGNS*LHLSCC
Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCCGTGCAAGGTGCCCTaGCTCGCCACAGCGGTAACA +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPPCKVP*LATAVT
Trigger: TGTTACCGCTGTGGCGAGTCAGGGCACCTTGCACGG...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAACGGGCTTACTGGTCTaGCTCAACTCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPTGLLV*LNSSHS
Trigger: TGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGT...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCACGGGCTTACTGGTCTaGCTCAACTCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFITGLLV*LNSSHS
Trigger: TGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGT...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCAGCACAGTGGCTCACCTaGGGGCAACAGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAAQWLT*GQQLET
Trigger: GGTCTCCAACTGTTGCCCTCAGGTGAGCCACTGTGC...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR TCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAACAGGGCATGGGGAGTaGATAATGGTTGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSTGHGE*IMVEVP
Trigger: TGGAACTTCAACCATTATTCACTCCCCATGCCCTGT...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR GCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTTTGAGGGTCCTTGCCTaGGCCACACGCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPLRVLA*ATRGSA
Trigger: TGCAGACCCGCGTGTGGCGCAGGCAAGGACCCTCAA...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATACATTCCCGTGCAAGGTaGCCTGACTCGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIHSRAR*PDSPQR
Trigger: CCGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATG...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATCATTCCCGTGCAAGGTaGCCTGACTCGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYHSRAR*PDSPQR
Trigger: CCGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATG...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAGGAGTTGCCTCTATCTaGCAACCTTTGGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPGVASI*QPLASE
Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCC...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATACTCGGACGCAGGCCTaGGGAAGACGGCTCGCAAGG +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHTRTQA*GRRLAR
Trigger: CCTTGCGAGCCGTCTTCCCCAGGCCTGCGTCCGAGT...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGGAAGATCACAATCCTTaGCAAGATGACCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQEDHNP*QDDQTH
Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTC...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHQSLAM*PPLPQL
Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPIPIHQ*HGKGVL
Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCGACGAGGAAACAAACTaGAAACCTCTGCCACGGCTT +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIDEETN*KPLPRL
Trigger: AAGCCGTGGCAGAGGTTTCCAGTTTGTTTCCTCGTC...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446936.6
ENST00000502976.5
CDS-3UTR TCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTTGGTGCAGTCTTTTTaGATGTGTCCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQLVQSF*MCPNSP
Trigger: TGGAGAATTCGGACACATTCAAAAAGACTGCACCAA...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHHSGNS*LHLSCC
Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKHSGNS*LHLSCC
Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAAAACCTGTTCAGACTaGACACAGAACTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPKTCSD*TQNSRA
Trigger: TGCCCTTGAGTTCTGTGTTCAGTCTGAACAGGTTTT...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR GCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATTTGAGGGTCCTTGCCTaGGCCACACGCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHLRVLA*ATRGSA
Trigger: TGCAGACCCGCGTGTGGCGCAGGCAAGGACCCTCAA...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATATTTTGAGGGTCCTTaGCTGCGCCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAYFEGP*LRHTRV
Trigger: GACCCGCGTGTGGCGCAGGCAAGGACCCTCAAAATA...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCCAGATGGCCTGGTTTaGCACAGTTGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHPDGLV*HSCSSI
Trigger: AATGCTGCTACAACTGTGGCAAACCAGGCCATCTGG...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATCATTCCCGTGCAAGGTaGCCTGACTCGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHHSRAR*PDSPQR
Trigger: CCGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATG...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAGGAGTTGCCTCTATCTaGCAACCTTTGGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKGVASI*QPLASE
Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCC...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCATTCCCGGGCCCAGTaGCCAGATCGTCCACACTTG +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPHSRAQ*PDRPHL
Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATG...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATCATTCCCGGGCCCAGTaGCCAGATCGTCCACACTTG +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYHSRAQ*PDRPHL
Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATG...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAAGATCACAATCCTTaGCAAGATGACCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSEDHNP*QDDQTH
Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTC...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCCTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFILSANL*PVKRIQ
Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCTTGGTGCAGTCTTTTTaGATGTGTCCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPLVQSF*MCPNSP
Trigger: TGGAGAATTCGGACACATTCAAAAAGACTGCACCAA...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCAGTTGATGGCTACATaGCCAGTTTCACCACACCTA +
Preference number: 4 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHQLMAT*PVSPHL
Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAACTG...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTTCTATGTAGGGCCTaGTACAGATGTTACTTGATG +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSVLCRA*YRCYLM
Trigger: CATCAAGTAACATCTGTATCAGGCCCTACATAGAAC...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAACCCTGCATGAAGGATaGAAAACTCATACCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AWELPLSANLWPVKRIQRTLHEG*KTHTQS
Trigger: ACTTTGGGTATGAGTTTTTCATCCTTCATGCAGGGT...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR TCA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATTGTGCACAGCACAGCTaGGACACCACCATTTTAACA +
Preference number: 4 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHCAQHS*DTTILT
Trigger: TGTTAAAATGGTGGTGTCTCAGCTGTGCTGTGCACA...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR CCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAGACGAGGAAACAAACTaGAAACCTCTATCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPDEETN*KPLSEV
Trigger: TACCTCGGATAGAGGTTTCCAGTTTGTTTCCTCGTC...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000451728.6
CDS-3UTR CCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCGAAGATCACAATCCTTaGCAAGATGACCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIEDHNP*QDDQTH
Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTC...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCAGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAAPCSP*QCGHLY
Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYALALS*APCSPW
Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKLSANL*PVKRIQ
Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTTTTACCTCCTACATaGGAACATGTTCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSVLPPT*EHVQGT
Trigger: GGTTCCTTGAACATGTTCCCATGTAGGAGGTAAAAC...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAGTTTTACCTCCTACATaGGAACATGTTCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: AWELPLSANLWPVKRIQRVLPPT*EHVQGT
Trigger: GGTTCCTTGAACATGTTCCCATGTAGGAGGTAAAAC...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACAATCCTTGGCAAGATaGCCAGACTCACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAQSLAR*PDSPQR
Trigger: TCGCTGTGGTGAGTCTGGTCATCTTGCCAAGGATTG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCTTGGTGCAGTCTTTTTaGATGTGTCCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFILVQSF*MCPNSP
Trigger: TGGAGAATTCGGACACATTCAAAAAGACTGCACCAA...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATTTGTCTTGCTGCAGTTaGTGGCTACATGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHLSCCS*WLHDQF
Trigger: AAACTGGTCATGTAGCCATCAACTGCAGCAAGACAA...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCCGTGCAAGGTGCCCTaGCTCGCCACAGCGGTAACA +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLPCKVP*LATAVT
Trigger: TGTTACCGCTGTGGCGAGTCAGGGCACCTTGCACGG...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTTATTTAATAGCTACTaGGGTCAGACAATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LAWELPLSANLWPVKRIQLFNSY*GQTIQD
Trigger: GTCTTGGATTGTCTGACCTCAGTAGCTATTAAATAA...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATAGCTACTCAGGAGGCTaGGGCAGGAGAATGGCACGA +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHSYSGG*GRRMAR
Trigger: TCGTGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCT...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR GCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGTTGAGGGTCCTTGCCTaGGCCACACGCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRLRVLA*ATRGSA
Trigger: TGCAGACCCGCGTGTGGCGCAGGCAAGGACCCTCAA...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTATTTTGAGGGTCCTTaGCTGCGCCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAYFEGP*LRHTRV
Trigger: GACCCGCGTGTGGCGCAGGCAAGGACCCTCAAAATA...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCAATTGCTGCTCATGGCTaGAGTCAGATCTTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAIAAHG*SQIFRV
Trigger: GACGCGGAAGATCTGACTGCAGCCATGAGCAGCAAT...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTCATTCCCGTGCAAGGTaGCCTGACTCGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFHSRAR*PDSPQR
Trigger: CCGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATG...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTCATTCCCGTGCAAGGTaGCCTGACTCGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLHSRAR*PDSPQR
Trigger: CCGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATG...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
CDS-3UTR GCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACACTGGCCTGGGAGTTaGCTCTATCTGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAHWPGS*LYLPTF
Trigger: AAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCTGTGTTCTAAACCTTTaGCATCACCATCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPCVLNL*HHHLCV
Trigger: GACACATAGATGGTGATGGCAAAGGTTTAGAACACA...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTCCGGGAGGTGGAGGTTaGAGTGAGCCAAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLPGGGG*SEPSLH
Trigger: GTGCAGGCTTGGCTCACTGCAACCTCCACCTCCCGG...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR GCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAGATAACAAATGTCTCTaGCACGGCTTCTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKDNKCL*HGFSFH
Trigger: GTGGAATGAGAAGCCGTGGCAGAGACATTTGTTATC...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500450.6
CDS-3UTR CCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAGAAGATCACAATCCTTaGCAAGATGACCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKEDHNP*QDDQTH
Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTC...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAQSLAM*PPLPQL
Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIAPCSP*QCGHLY
Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHALALS*APCSPW
Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAALALS*APCSPW
Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATCCAGGACGGGCTTACTaGTCTGACTCAACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYPGRAY*SDSTLP
Trigger: GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGG...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATACCAGGACGGGCTTACTaGTCTGACTCAACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIPGRAY*SDSTLP
Trigger: GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGG...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTAGAGGCTGTTTATTTTaGGGGTCCTTGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPRGCLF*GSLPAP
Trigger: TGGCGCAGGCAAGGACCCTCAAAATAAACAGCCTCT...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACAGATCGTCCACACTTaGAGCACTCATTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAQIVHT*STHCCS
Trigger: TGAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCAATCCTTGGCAAGATaGCCAGACTCACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPQSLAR*PDSPQR
Trigger: TCGCTGTGGTGAGTCTGGTCATCTTGCCAAGGATTG...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAATTGGTGCAGTCTTTTTaGATGTGTCCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGVASICQPLASEEDSEKLVQSF*MCPNSP
Trigger: TGGAGAATTCGGACACATTCAAAAAGACTGCACCAA...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAHSGNS*LHLSCC
Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCAACGGGCTTACTGGTCTaGCTCAACTCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKATGLLV*LNSSHS
Trigger: TGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGT...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGATTATTTAATAGCTACTaGGGTCAGACAATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: AWELPLSANLWPVKRIQRLFNSY*GQTIQD
Trigger: GTCTTGGATTGTCTGACCTCAGTAGCTATTAAATAA...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATGTTCTATGTAGGGCCTaGTACAGATGTTACTTGATG +
Preference number: 4 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHVLCRA*YRCYLM
Trigger: CATCAAGTAACATCTGTATCAGGCCCTACATAGAAC...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCATTTCTCTGCAATTCCTaGATAGCTCCAAATTATGCT +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSFLCNS*IAPNYA
Trigger: AGCATAATTTGGAGCTATTCAGGAATTGCAGAGAAA...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAATTGCTGCTCATGGCTaGAGTCAGATCTTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIIAAHG*SQIFRV
Trigger: GACGCGGAAGATCTGACTGCAGCCATGAGCAGCAAT...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACCAGATGGCCTGGTTTaGCACAGTTGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAPDGLV*HSCSSI
Trigger: AATGCTGCTACAACTGTGGCAAACCAGGCCATCTGG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATGCATTTCTGCTCATCTaGATGGTCGCAGTCACGAGC +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYAFLLI*MVAVTS
Trigger: GCTCGTGACTGCGACCATGCAGATGAGCAGAAATGC...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCACTGGCCTGGGAGTTaGCTCTATCTGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPHWPGS*LYLPTF
Trigger: AAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTG...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTCATTCCCGGGCCCAGTaGCCAGATCGTCCACACTTG +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFHSRAQ*PDRPHL
Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATG...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTCATTCCCGGGCCCAGTaGCCAGATCGTCCACACTTG +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLHSRAQ*PDRPHL
Trigger: CAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATG...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
CDS-3UTR CCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATCAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYQSLAM*PPLPQL
Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATACAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIQSLAM*PPLPQL
Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATTTCTGCTCATCTGCATaGTCGCAGTCACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYFCSSA*SQSRAR
Trigger: TCTGGCTCGTGACTGCGACCATGCAGATGAGCAGAA...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATCCAGGACGGGCTTACTaGTCTGACTCAACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHPGRAY*SDSTLP
Trigger: GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGG...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATCAGATCGTCCACACTTaGAGCACTCATTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYQIVHT*STHCCS
Trigger: TGAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTG...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCAGATCGTCCACACTTaGAGCACTCATTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPQIVHT*STHCCS
Trigger: TGAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTG...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCACAGTTGATGGCTACATaGCCAGTTTCACCACACCTA +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKAQLMAT*PVSPHL
Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAACTG...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTATTTAATAGCTACTaGGGTCAGACAATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPLFNSY*GQTIQD
Trigger: GTCTTGGATTGTCTGACCTCAGTAGCTATTAAATAA...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPLSWAP*SPWQCG
Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGCATTTCTGCTCATCTaGATGGTCGCAGTCACGAGC +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHAFLLI*MVAVTS
Trigger: GCTCGTGACTGCGACCATGCAGATGAGCAGAAATGC...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAGGAGTTGCCTCTATCTaGCAACCTTTGGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIGVASI*QPLASE
Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCC...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATCAAACTGGAAACCTCTaGCACGGCTTCTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYQTGNL*HGFSFH
Trigger: GTGGAATGAGAAGCCGTGGCAGAGGTTTCCAGTTTG...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446936.6
ENST00000502976.5
CDS-3UTR CCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATCAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHQSLAM*PPLPQL
Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFALALS*APCSPW
Trigger: CCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGC...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTCTGCTCATCTGCATaGTCGCAGTCACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAFCSSA*SQSRAR
Trigger: TCTGGCTCGTGACTGCGACCATGCAGATGAGCAGAA...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATTTCTGCTCATCTGCATaGTCGCAGTCACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHFCSSA*SQSRAR
Trigger: TCTGGCTCGTGACTGCGACCATGCAGATGAGCAGAA...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCTATAGCACTTCACTTTaGTGCAGTCTTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPYSTSL*CSLFEC
Trigger: ACATTCAAAAAGACTGCACCAAAGTGAAGTGCTATA...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCATATAGCACTTCACTTTaGTGCAGTCTTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: TGLGVASICQPLASEEDSYSTSL*CSLFEC
Trigger: ACATTCAAAAAGACTGCACCAAAGTGAAGTGCTATA...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIIPIHQ*HGKGVL
Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTAGAGGCTGTTTATTTTaGGGGTCCTTGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPRGCLF*GSLPAP
Trigger: TGGCGCAGGCAAGGACCCTCAAAATAAACAGCCTCT...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATACAGTTGATGGCTACATaGCCAGTTTCACCACACCTA +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIQLMAT*PVSPHL
Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAACTG...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLLSWAP*SPWQCG
Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
CDS-3UTR GCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLLSWAP*SPWQCG
Trigger: GCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAG...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATCCAGATGGCCTGGTTTaGCACAGTTGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHPDGLV*HSCSSI
Trigger: AATGCTGCTACAACTGTGGCAAACCAGGCCATCTGG...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTCACTGGCCTGGGAGTTaGCTCTATCTGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPHWPGS*LYLPTF
Trigger: AAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTG...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFAPCSP*QCGHLY
Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLAPCSP*QCGHLY
Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTAC +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLAPCSP*QCGHLY
Trigger: GTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGC...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
CDS-3UTR CCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTTCTGCTCATCTGCATaGTCGCAGTCACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPFCSSA*SQSRAR
Trigger: TCTGGCTCGTGACTGCGACCATGCAGATGAGCAGAA...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATATAGCACTTCACTTTaGTGCAGTCTTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPYSTSL*CSLFEC
Trigger: ACATTCAAAAAGACTGCACCAAAGTGAAGTGCTATA...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGACGAGGAAACAAACTaGAAACCTCTGCCACGGCTT +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHDEETN*KPLPRL
Trigger: AAGCCGTGGCAGAGGTTTCCAGTTTGTTTCCTCGTC...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446936.6
ENST00000502976.5
CDS-3UTR TCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCCAGTTGATGGCTACATaGCCAGTTTCACCACACCTA +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAQLMAT*PVSPHL
Trigger: TAGGTGTGGTGAAACTGGTCATGTAGCCATCAACTG...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATTTGTCTTGCTGCAGTTaGTGGCTACATGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYLSCCS*WLHDQF
Trigger: AAACTGGTCATGTAGCCATCAACTGCAGCAAGACAA...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTTTGTCTTGCTGCAGTTaGTGGCTACATGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPLSCCS*WLHDQF
Trigger: AAACTGGTCATGTAGCCATCAACTGCAGCAAGACAA...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATACCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGATTGCTGCTCATGGCTaGAGTCAGATCTTCCGCGTC +
Preference number: 4 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRIAAHG*SQIFRV
Trigger: GACGCGGAAGATCTGACTGCAGCCATGAGCAGCAAT...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTCCAGATGGCCTGGTTTaGCACAGTTGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPPDGLV*HSCSSI
Trigger: AATGCTGCTACAACTGTGGCAAACCAGGCCATCTGG...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGGCATTTCTGCTCATCTaGATGGTCGCAGTCACGAGC +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLAFLLI*MVAVTS
Trigger: GCTCGTGACTGCGACCATGCAGATGAGCAGAAATGC...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTGGAGTTGCCTCTATCTaGCAACCTTTGGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPGVASI*QPLASE
Trigger: TTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCC...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTCACTGGCCTGGGAGTTaGCTCTATCTGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFHWPGS*LYLPTF
Trigger: AAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTG...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTGACAAGGTTGGAATGTaGACAGCACAGCTGAGACAC +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPDKVGM*TAQLRH
Trigger: GTGTCTCAGCTGTGCTGTGCACATTCCAACCTTGTC...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR CCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAGACGAGGAAACAAACTaGAAACCTCTATCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIDEETN*KPLSEV
Trigger: TACCTCGGATAGAGGTTTCCAGTTTGTTTCCTCGTC...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000451728.6
CDS-3UTR CCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAGAAGATCACAATCCTTaGCAAGATGACCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYIEDHNP*QDDQTH
Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTC...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTCAGTCCTTGGCAATGTaGCCACCTCTACCGCAGTTA +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLQSLAM*PPLPQL
Trigger: TAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTG...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
CDS-3UTR CCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGTTCTGCTCATCTGCATaGTCGCAGTCACGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLFCSSA*SQSRAR
Trigger: TCTGGCTCGTGACTGCGACCATGCAGATGAGCAGAA...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATTATAGCACTTCACTTTaGTGCAGTCTTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHYSTSL*CSLFEC
Trigger: ACATTCAAAAAGACTGCACCAAAGTGAAGTGCTATA...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATCTATCTGCCAACCTTTaGCCAGTGAAGAGGATTCAG +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHLSANL*PVKRIQ
Trigger: CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAG...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPIPIHQ*HGKGVL
Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTCAGATCGTCCACACTTaGAGCACTCATTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFQIVHT*STHCCS
Trigger: TGAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTG...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGCAGATCGTCCACACTTaGAGCACTCATTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRQIVHT*STHCCS
Trigger: TGAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTG...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTCACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLHSGNS*LHLSCC
Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
CDS-3UTR TCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTCACAGCGGTAACAGTTaGCTTCACTTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFHSGNS*LHLSCC
Trigger: GCAGCAAGACAAGTGAAGTCAACTGTTACCGCTGTG...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCCAGATGGCCTGGTTTaGCACAGTTGTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLPDGLV*HSCSSI
Trigger: AATGCTGCTACAACTGTGGCAAACCAGGCCATCTGG...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATGTGTTCTAAACCTTTaGCATCACCATCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: IHQSLFTSGTERGFFNKACVLNL*HHHLCV
Trigger: GACACATAGATGGTGATGGCAAAGGTTTAGAACACA...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGCAAACTGGAAACCTCTaGCACGGCTTCTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRQTGNL*HGFSFH
Trigger: GTGGAATGAGAAGCCGTGGCAGAGGTTTCCAGTTTG...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446936.6
ENST00000502976.5
CDS-3UTR CCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCGAAGATCACAATCCTTaGCAAGATGACCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAEDHNP*QDDQTH
Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTC...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLIPIHQ*HGKGVL
Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGATCCCTATTCACCAGTaGCACGGAAAGGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRIPIHQ*HGKGVL
Trigger: AAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGAT...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTGTTTTACCTCCTACATaGGAACATGTTCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPVLPPT*EHVQGT
Trigger: GGTTCCTTGAACATGTTCCCATGTAGGAGGTAAAAC...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTTGTCTTGCTGCAGTTaGTGGCTACATGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPLSCCS*WLHDQF
Trigger: AAACTGGTCATGTAGCCATCAACTGCAGCAAGACAA...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTCCAACCTTTGGCCAGTaGAGAGGATTCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPPTFGQ*RGFREN
Trigger: ATTTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGG...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCGTTCTATGTAGGGCCTaGTACAGATGTTACTTGATG +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAVLCRA*YRCYLM
Trigger: CATCAAGTAACATCTGTATCAGGCCCTACATAGAAC...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCTTCAACATCCTCCTaGAGATCACAATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFASTSS*RSQSLA
Trigger: TGCCAAGGATTGTGATCTTCAGGAGGATGTTGAAGC...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446936.6
CDS-3UTR GCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATATGTGTTCTAAACCTTTaGCATCACCATCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYICVLNL*HHHLCV
Trigger: GACACATAGATGGTGATGGCAAAGGTTTAGAACACA...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTGAAGATCACAATCCTTaGCAAGATGACCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPEDHNP*QDDQTH
Trigger: GTGAGTCTGGTCATCTTGCCAAGGATTGTGATCTTC...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTTACCTCCTACATaGGAACATGTTCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHVLPPT*EHVQGT
Trigger: GGTTCCTTGAACATGTTCCCATGTAGGAGGTAAAAC...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGCATTTAATTTCGAAGTaGGGGGAAACAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRHLISK*GETGHG
Trigger: CCCATGCCCTGTTTCCCCCCACTTCGAAATTAAATG...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR TCA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTTGGTGCAGTCTTTTTaGATGTGTCCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPLVQSF*MCPNSP
Trigger: TGGAGAATTCGGACACATTCAAAAAGACTGCACCAA...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTTTGTCTTGCTGCAGTTaGTGGCTACATGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFLSCCS*WLHDQF
Trigger: AAACTGGTCATGTAGCCATCAACTGCAGCAAGACAA...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGTTGTCTTGCTGCAGTTaGTGGCTACATGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLLSCCS*WLHDQF
Trigger: AAACTGGTCATGTAGCCATCAACTGCAGCAAGACAA...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTTTATTTAATAGCTACTaGGGTCAGACAATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPLFNSY*GQTIQD
Trigger: GTCTTGGATTGTCTGACCTCAGTAGCTATTAAATAA...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATATTATTTAATAGCTACTaGGGTCAGACAATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SLFTSGTERGFFNKALYILFNSY*GQTIQD
Trigger: GTCTTGGATTGTCTGACCTCAGTAGCTATTAAATAA...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATTCAGGACTATTAATTTaGCAAGGTTGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHSGLLI*QGWNVH
Trigger: GTGCACATTCCAACCTTGTCAAATTAATAGTCCTGA...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS-3UTR GCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTGTGTTCTAAACCTTTaGCATCACCATCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRACVLNL*HHHLCV
Trigger: GACACATAGATGGTGATGGCAAAGGTTTAGAACACA...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR GCA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATTGTGTTCTAAACCTTTaGCATCACCATCTATGTGTC +
Preference number: 4 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHCVLNL*HHHLCV
Trigger: GACACATAGATGGTGATGGCAAAGGTTTAGAACACA...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGACGAGGAAACAAACTaGAAACCTCTATCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRDEETN*KPLSEV
Trigger: TACCTCGGATAGAGGTTTCCAGTTTGTTTCCTCGTC...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422453.7
ENST00000451728.6
3UTR CAA 72 bp ACCATCTATGTGTCCAACATCAACACTGTGATGAAGTaGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: TIYVSNINTVMK*FLFRLLFRFLS
Trigger: CGAGAGAAATCGGAATAAAAGCCTAAACAGGAACAACTTCATCACAGTGTTGATGTTGGACACATAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGTTGGTGCAGTCTTTTTaGATGTGTCCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLLVQSF*MCPNSP
Trigger: TGGAGAATTCGGACACATTCAAAAAGACTGCACCAA...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGTTCTATGTAGGGCCTaGTACAGATGTTACTTGATG +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFVLCRA*YRCYLM
Trigger: CATCAAGTAACATCTGTATCAGGCCCTACATAGAAC...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTTCTCTGCAATTCCTaGATAGCTCCAAATTATGCT +
Preference number: 4 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAFLCNS*IAPNYA
Trigger: AGCATAATTTGGAGCTATTCAGGAATTGCAGAGAAA...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATTATAGCACTTCACTTTaGTGCAGTCTTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: INPYSPVARKGGSLTKHYYSTSL*CSLFEC
Trigger: ACATTCAAAAAGACTGCACCAAAGTGAAGTGCTATA...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTTATAGCACTTCACTTTaGTGCAGTCTTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: FTSGTERGFFNKALYITPYSTSL*CSLFEC
Trigger: ACATTCAAAAAGACTGCACCAAAGTGAAGTGCTATA...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTGTTTTACCTCCTACATaGGAACATGTTCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLVLPPT*EHVQGT
Trigger: GGTTCCTTGAACATGTTCCCATGTAGGAGGTAAAAC...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
3UTR CAA 72 bp TCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTaGTTTACTCCCACTCAACTGTATGTTCTATGTAGG +
Preference number: 4 (lower is better)
Translates to: SLEQPLTRMFIF*FTPTQLYVLCR
Trigger: CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTTTATTTAATAGCTACTaGGGTCAGACAATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFLFNSY*GQTIQD
Trigger: GTCTTGGATTGTCTGACCTCAGTAGCTATTAAATAA...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTTTTCTCTGCAATTCCTaGATAGCTCCAAATTATGCT +
Preference number: 4 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFFLCNS*IAPNYA
Trigger: AGCATAATTTGGAGCTATTCAGGAATTGCAGAGAAA...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGTTTCTCTGCAATTCCTaGATAGCTCCAAATTATGCT +
Preference number: 4 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRFLCNS*IAPNYA
Trigger: AGCATAATTTGGAGCTATTCAGGAATTGCAGAGAAA...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR TCA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTTTTCTCTGCAATTCCTaGATAGCTCCAAATTATGCT +
Preference number: 4 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLFLCNS*IAPNYA
Trigger: AGCATAATTTGGAGCTATTCAGGAATTGCAGAGAAA...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
CDS-3UTR TCA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCATCTCAACTCTAAATaGGACACTAGCAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLHLNSK*DTSKNK
Trigger: CTTGTTTTTGCTAGTGTCTCATTTAGAGTTGAGATG...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS GCA 90 bp GGGAAGACGGCTCGCAAGGTAGAGGCTGTTTATTTTGAGGGTCCTTaGCTGCGCCACACGCGGGTCTGCACACGGCCCCACATACGCCGC +
Preference number: 5 (lower is better)
Translates to: GKTARKVEAVYFEGP*LRHTRVCTRPHIRR
Trigger: GCGGCGTATGTGGGGCCGTGTGCAGACCCGCGTGTGGCGCAGGCAAGGACCCTCAAAATAAACAGCCTCTACCTTGCGAGCCGTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504813.5
ENST00000512338.1
CDS CCA 90 bp GGCCTGGTTTGCCACAGTTGTAGCAGCATTGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGGCAATGTGGCCACCTCTACCGCAGT +
Preference number: 5 (lower is better)
Translates to: GLVCHSCSSIALALS*APCSPWQCGHLYRS
Trigger: ACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGTGGCAAACCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
ENST00000512338.1
CDS-3UTR CAA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA +
Preference number: 5 (lower is better)
Translates to: LAWELPLSANLWPVKRIQGSLQS*AMWPPL
Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS GCA 90 bp TGCCACAGTTGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGCCACCTCTACCGCAGTTATAGCAGG +
Preference number: 5 (lower is better)
Translates to: CHSCSSIALALSWAP*SPWQCGHLYRSYSR
Trigger: CCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
ENST00000512338.1
CDS CCA 90 bp TGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTACCGCAGTTATAGCAGGCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: CSSIALALSWAPCSP*QCGHLYRSYSRHPP
Trigger: AGGAGGATGCCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA +
Preference number: 5 (lower is better)
Translates to: TGLGVASICQPLASEEDSGSLQS*AMWPPL
Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: LAWELPLSANLWPVKRIQSLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA +
Preference number: 5 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIGSLQS*AMWPPL
Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGATCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: AWELPLSANLWPVKRIQRSLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS CCA 90 bp TGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTACCGCAGTTATAGCAGGCTTCAACAT +
Preference number: 5 (lower is better)
Translates to: CSSIALALSWAPCSP*QCGHLYRSYSRLQH
Trigger: ATGTTGAAGCCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441626.6
ENST00000446936.6
CDS-3UTR CAA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCACACTTGAAGCACTCATaGCTGCTCATGGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: TGLGVASICQPLASEEDSHLKHS*LLMAAV
Trigger: GACTGCAGCCATGAGCAGCAATGAGTGCTTCAAGTG...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCTCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFISLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCCACTTGAAGCACTCATaGCTGCTCATGGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFIHLKHS*LLMAAV
Trigger: GACTGCAGCCATGAGCAGCAATGAGTGCTTCAAGTG...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCACACTTGAAGCACTCATaGCTGCTCATGGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPHLKHS*LLMAAV
Trigger: GACTGCAGCCATGAGCAGCAATGAGTGCTTCAAGTG...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 5 (lower is better)
Translates to: LAWELPLSANLWPVKRIQSICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCCAGATCGTCCACACTaGAAGCACTCATTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHPDRPH*KHSLLL
Trigger: GAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTGG...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAAACAGTTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LGVASICQPLASEEDSEKTVVAA*LSLSLG
Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGT...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATACAGTTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHTVVAA*LSLSLG
Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGT...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCATCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 5 (lower is better)
Translates to: TGLGVASICQPLASEEDSSICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCTCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 5 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPSICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGATCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 5 (lower is better)
Translates to: AWELPLSANLWPVKRIQRSICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGTTTGGTGCAGTCTTTTaGAATGTGTCCGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: LAWELPLSANLWPVKRIQFGAVF*NVSEFS
Trigger: GGAGAATTCGGACACATTCAAAAAGACTGCACCAAA...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGATTGACTTCACTTGTCTaGCTGCAGTTGATGGCTACA +
Preference number: 5 (lower is better)
Translates to: AWELPLSANLWPVKRIQRLTSLV*LQLMAT
Trigger: TGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAA...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 5 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPSICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA +
Preference number: 5 (lower is better)
Translates to: SLFTSGTERGFFNKALYIGSLQS*AMWPPL
Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCTTTGGTGCAGTCTTTTaGAATGTGTCCGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPFGAVF*NVSEFS
Trigger: GGAGAATTCGGACACATTCAAAAAGACTGCACCAAA...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCATTTGGTGCAGTCTTTTaGAATGTGTCCGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: TGLGVASICQPLASEEDSFGAVF*NVSEFS
Trigger: GGAGAATTCGGACACATTCAAAAAGACTGCACCAAA...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCTTGACTTCACTTGTCTaGCTGCAGTTGATGGCTACA +
Preference number: 5 (lower is better)
Translates to: VQGTQDGLTGLTQLFPFILTSLV*LQLMAT
Trigger: TGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAA...GATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp CTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGCGCATGTTTATCTTTTaGTTTACTCCCACTCAACTG +
Preference number: 5 (lower is better)
Translates to: LAWELPLSANLWPVKRIQRMFIF*FTPTQL
Trigger: CAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG...CTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA +
Preference number: 5 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRAGSLQS*AMWPPL
Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCAACAGTTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: IHQSLFTSGTERGFFNKATVVAA*LSLSLG
Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGT...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTTGGTGCAGTCTTTTaGAATGTGTCCGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: EHVQGTQDGLTGLTQLFPFGAVF*NVSEFS
Trigger: GGAGAATTCGGACACATTCAAAAAGACTGCACCAAA...TGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp CTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAATTGACTTCACTTGTCTaGCTGCAGTTGATGGCTACA +
Preference number: 5 (lower is better)
Translates to: LGVASICQPLASEEDSEKLTSLV*LQLMAT
Trigger: TGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAA...TTTCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATTTGACTTCACTTGTCTaGCTGCAGTTGATGGCTACA +
Preference number: 5 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHLTSLV*LQLMAT
Trigger: TGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAA...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATACACTTGAAGCACTCATaGCTGCTCATGGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SLFTSGTERGFFNKALYIHLKHS*LLMAAV
Trigger: GACTGCAGCCATGAGCAGCAATGAGTGCTTCAAGTG...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATACCAGATCGTCCACACTaGAAGCACTCATTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SLFTSGTERGFFNKALYIPDRPH*KHSLLL
Trigger: GAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTGG...TATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATCCAGATCGTCCACACTaGAAGCACTCATTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: INPYSPVARKGGSLTKHYPDRPH*KHSLLL
Trigger: GAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTGG...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ACTGGCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAAACACTGTGATGAAGTaGTTCCTGTTTAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: TGLGVASICQPLASEEDSNTVMK*FLFRLL
Trigger: TAAAAGCCTAAACAGGAACAACTTCATCACAGTGTT...TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GGAACATGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCAACACTGTGATGAAGTaGTTCCTGTTTAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: GTCSRNPGRAYWSDSTLPNTVMK*FLFRLL
Trigger: TAAAAGCCTAAACAGGAACAACTTCATCACAGTGTT...GGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCCTGGGAGTTGCCTCTATCTGCCAACCTTTGGCCAGTGAAGAGGATTCAGAGAAACACTGTGATGAAGTaGTTCCTGTTTAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: AWELPLSANLWPVKRIQRNTVMK*FLFRLL
Trigger: TAAAAGCCTAAACAGGAACAACTTCATCACAGTGTT...TCTCTGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGAGGCAACTCCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATCACTTGAAGCACTCATaGCTGCTCATGGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHHLKHS*LLMAAV
Trigger: GACTGCAGCCATGAGCAGCAATGAGTGCTTCAAGTG...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGGGCTCCTTGCAGTCCTaGGCAATGTGGCCACCTCTA +
Preference number: 5 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLGSLQS*AMWPPL
Trigger: TAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCC...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATCTATCTGCCAACCTTaGGCCAGTGAAGAGGATTCA +
Preference number: 5 (lower is better)
Translates to: IHQSLFTSGTERGFFNKASICQP*ASEEDS
Trigger: TGAATCCTCTTCACTGGCCAAAGGTTGGCAGATAGA...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TGTTCAAGGAACCCAGGACGGGCTTACTGGTCTGACTCAACTCTTCCCATTCATCGCATGTTTATCTTTTaGTTTACTCCCACTCAACTG +
Preference number: 5 (lower is better)
Translates to: CSRNPGRAYWSDSTLPIHRMFIF*FTPTQL
Trigger: CAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG...ATGAATGGGAAGAGTTGAGTCAGACCAGTAAGCCCGTCCTGGGTTCCTTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTACAGTTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPTVVAA*LSLSLG
Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGT...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGTCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRSLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGTCACTGGCCTGGGAGTaGCCTCTATCTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLSLAWE*PLSANL
Trigger: AAGGTTGGCAGATAGAGGCAACTCCCAGGCCAGTGA...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTCCAGATCGTCCACACTaGAAGCACTCATTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFPDRPH*KHSLLL
Trigger: GAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTGG...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp AATTTGAAACAAACAAAAAGAACTTTAGTCAAACTCCCCTTCCTCCTCCAGCTTCCAGATCGTCCACACTaGAAGCACTCATTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: NLKQTKRTLVKLPFLLQLPDRPH*KHSLLL
Trigger: GAGCAGCAATGAGTGCTTCAAGTGTGGACGATCTGG...AAGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000502976.5
CDS-3UTR CAA 90 bp GGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTACAGTTGTAGCAGCATaGCTCTCGCTCTCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GFYSDFSRTAINTHVYLFTVVAA*LSLSLG
Trigger: CCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGT...AAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTTTGACTTCACTTGTCTaGCTGCAGTTGATGGCTACA +
Preference number: 5 (lower is better)
Translates to: FTSGTERGFFNKALYITPLTSLV*LQLMAT
Trigger: TGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAA...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATTTTGGTGCAGTCTTTTaGAATGTGTCCGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: INPYSPVARKGGSLTKHYFGAVF*NVSEFS
Trigger: GGAGAATTCGGACACATTCAAAAAGACTGCACCAAA...ATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp CGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTGACTTCACTTGTCTaGCTGCAGTTGATGGCTACA +
Preference number: 5 (lower is better)
Translates to: RMFIFLFTPTQLYVLCRALTSLV*LQLMAT
Trigger: TGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAA...GGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGGCCTTTGACTTCACTTGTCTaGCTGCAGTTGATGGCTACA +
Preference number: 5 (lower is better)
Translates to: ACLSFCLLPLNCMFYVGPLTSLV*LQLMAT
Trigger: TGTAGCCATCAACTGCAGCAAGACAAGTGAAGTCAA...AGGCCCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCATTATACATAACACCTCGCATGTTTATCTTTTaGTTTACTCCCACTCAACTG +
Preference number: 5 (lower is better)
Translates to: FTSGTERGFFNKALYITPRMFIF*FTPTQL
Trigger: CAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG...AGGTGTTATGTATAATGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ATTCATCAATCCCTATTCACCAGTGGCACGGAAAGGGGGTTCTTTAACAAAGCAAACACTGTGATGAAGTaGTTCCTGTTTAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: IHQSLFTSGTERGFFNKANTVMK*FLFRLL
Trigger: TAAAAGCCTAAACAGGAACAACTTCATCACAGTGTT...TGCTTTGTTAAAGAACCCCCTTTCCGTGCCACTGGTGAATAGGGATTGATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp TGTTCCTGTTTAGGCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATATTAATTTGACAAGGTaGGAATGTGCACAGCACAGC +
Preference number: 5 (lower is better)
Translates to: CSCLGFYSDFSRTAINTHINLTR*ECAQHS
Trigger: GCTGTGCTGTGCACATTCCAACCTTGTCAAATTAAT...ATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGCCTAAACAGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422453.7
CDS TCA 90 bp AACAAATGTCTGGAAGAGACGAGGAAACAAACTGGAAACCTGTTTTaGGCAAAAACAAAGAATTCGGCTAGTCAGACCAGTCTTGATACT +
Preference number: 5 (lower is better)
Translates to: NKCLEETRKQTGNLF*AKTKNSASQTSLDT
Trigger: AGTATCAAGACTGGTCTGACTAGCCGAATTCTTTGTTTTTGCTCAAAACAGGTTTCCAGTTTGTTTCCTCGTCTCTTCCAGACATTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507573.1
CDS-3UTR CAA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGTTTGGTGCAGTCTTTTaGAATGTGTCCGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLFGAVF*NVSEFS
Trigger: GGAGAATTCGGACACATTCAAAAAGACTGCACCAAA...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp GCTTTTATTCCGATTTCTCTCGAACAGCCATTAACACGCATGTTTATCTTTTTGCGCATGTTTATCTTTTaGTTTACTCCCACTCAACTG +
Preference number: 5 (lower is better)
Translates to: AFIPISLEQPLTRMFIFLRMFIF*FTPTQL
Trigger: CAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCG...CAAAAAGATAAACATGCGTGTTAATGGCTGTTCGAGAGAAATCGGAATAAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS-3UTR CAA 90 bp ACACGCATGTTTATCTTTTTGTTTACTCCCACTCAACTGTATGTTCTATGTAGGAACACTGTGATGAAGTaGTTCCTGTTTAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: TRMFIFLFTPTQLYVLCRNTVMK*FLFRLL
Trigger: TAAAAGCCTAAACAGGAACAACTTCATCACAGTGTT...CCTACATAGAACATACAGTTGAGTGGGAGTAAACAAAAAGATAAACATGCGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000422453.7
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502976.5
ENST00000504813.5
CDS GCA 72 bp GCTCGCAAGGTAGAGGCTGTTTATTTTGAGGGTCCTTaGCTGCGCCACACGCGGGTCTGCACACGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: ARKVEAVYFEGP*LRHTRVCTRPH
Trigger: GTGGGGCCGTGTGCAGACCCGCGTGTGGCGCAGGCAAGGACCCTCAAAATAAACAGCCTCTACCTTGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441626.6
ENST00000500450.6
ENST00000504813.5
ENST00000512338.1
CDS CCA 72 bp CCACGGCCTCCACCAGTAGGACATTCCCGGGCCCAGTaGCCAGATCGTCCACACTTGAAGCACTCATTGCTG +
Preference number: 6 (lower is better)
Translates to: PRPPPVGHSRAQ*PDRPHLKHSLL
Trigger: CAGCAATGAGTGCTTCAAGTGTGGACGATCTGGCCACTGGGCCCGGGAATGTCCTACTGGTGGAGGCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
ENST00000507573.1
ENST00000512338.1
CDS GCA 72 bp TGTAGCAGCATTGCTCTCGCTCTCTCTTGGGCTCCTTaGAGTCCTTGGCAATGTGGCCACCTCTACCGCAGT +
Preference number: 6 (lower is better)
Translates to: CSSIALALSWAP*SPWQCGHLYRS
Trigger: ACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
ENST00000512338.1
CDS CCA 72 bp TGCCACAGTTGTAGCAGCATTGCTCTCGCTCTCTCTTaGGCTCCTTGCAGTCCTTGGCAATGTGGCCACCTC +
Preference number: 6 (lower is better)
Translates to: CHSCSSIALALS*APCSPWQCGHL
Trigger: GAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGTGGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
ENST00000512338.1
CDS CCA 72 bp ATTGCTCTCGCTCTCTCTTGGGCTCCTTGCAGTCCTTaGCAATGTGGCCACCTCTACCGCAGTTATAGCAGG +
Preference number: 6 (lower is better)
Translates to: IALALSWAPCSP*QCGHLYRSYSR
Trigger: CCTGCTATAACTGCGGTAGAGGTGGCCACATTGCCAAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
ENST00000512338.1
CDS CAA 72 bp AGCCAGATGGCCTGGTTTGCCACAGTTGTAGCAGCATaGCTCTCGCTCTCTCTTGGGCTCCTTGCAGTCCTT +
Preference number: 6 (lower is better)
Translates to: SQMAWFATVVAA*LSLSLGLLAVL
Trigger: AAGGACTGCAAGGAGCCCAAGAGAGAGCGAGAGCAATGCTGCTACAACTGTGGCAAACCAGGCCATCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
ENST00000512338.1
CDS TCA 72 bp TGTAGCCTCAATTGTGCATTCCCGTGCAAGGTGCCCTaGCTCGCCACAGCGGTAACAGTTGACTTCACTTGT +
Preference number: 6 (lower is better)
Translates to: CSLNCAFPCKVP*LATAVTVDFTC
Trigger: ACAAGTGAAGTCAACTGTTACCGCTGTGGCGAGTCAGGGCACCTTGCACGGGAATGCACAATTGAGGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
CDS GCA 72 bp AACCTCAAAGGTGGAAATGCTATACACAGTTGCATGTaGTCACCTCTCCAAGCTCTAGAGGGGTATGAAAAG +
Preference number: 6 (lower is better)
Translates to: NLKGGNAIHSCM*SPLQALEGYEK
Trigger: CTTTTCATACCCCTCTAGAGCTTGGAGAGGTGAGCACATGCAACTGTGTATAGCATTTCCACCTTTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502372.1
ENST00000507573.1
CDS GCA 72 bp ATACAAAACCTCAAAGGTGGAAATGCTATACACAGTTaGATGTGCTCACCTCTCCAAGCTCTAGAGGGGTAT +
Preference number: 6 (lower is better)
Translates to: IQNLKGGNAIHS*MCSPLQALEGY
Trigger: ATACCCCTCTAGAGCTTGGAGAGGTGAGCACATGCAACTGTGTATAGCATTTCCACCTTTGAGGTTTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502372.1
ENST00000507573.1
CDS CAA 72 bp AATACAAAACCTCAAAGGTGGAAATGCTATACACAGTaGCATGTGCTCACCTCTCCAAGCTCTAGAGGGGTA +
Preference number: 6 (lower is better)
Translates to: NTKPQRWKCYTQ*HVLTSPSSRGV
Trigger: TACCCCTCTAGAGCTTGGAGAGGTGAGCACATGCAACTGTGTATAGCATTTCCACCTTTGAGGTTTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502372.1
ENST00000507573.1
CDS CAA 72 bp ACCACACCTATAGCACTTCACTTTGGTGCAGTCTTTTaGAATGTGTCCGAATTCTCCACAAGAATAGCATTT +
Preference number: 6 (lower is better)
Translates to: TTPIALHFGAVF*NVSEFSTRIAF
Trigger: AAATGCTATTCTTGTGGAGAATTCGGACACATTCAAAAAGACTGCACCAAAGTGAAGTGCTATAGGTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000422453.7
ENST00000441626.6
ENST00000446936.6
ENST00000451728.6
ENST00000500450.6
ENST00000502372.1
ENST00000502976.5
ENST00000504813.5
CDS TCA 72 bp TCGGCTAGTCAGACCAGTCTTGATACTAACAAATACTaGAGTACTTCAAATTTTTCTATTCGACAAAATACC +
Preference number: 6 (lower is better)
Translates to: SASQTSLDTNKY*STSNFSIRQNT
Trigger: GGTATTTTGTCGAATAGAAAAATTTGAAGTACTTCAGTATTTGTTAGTATCAAGACTGGTCTGACTAGCCGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507573.1