Pregenerated sensors for CNBD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176571Ensembl transcript IDs: ENST00000517748.1, ENST00000518476.6, ENST00000521593.5, ENST00000522105.1, ENST00000522427.1, ENST00000523299.5, ENST00000620844.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CTGGAGGCTGGGAAGTCTGAAATCAAGTTGCCAGCATaGTCAGATTCTGGTGAGGGCTGTCTTCCTAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LEAGKSEIKLPA*SDSGEGCLPSL Trigger: CAAGCTAGGAAGACAGCCCTCACCAGAATCTGACCATGCTGGCAACTTGATTTCAGACTTCCCAGCCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR CCA 90 bp | TTTTTCTCGTTCTGGAGGCTGGGAAGTCTGAAATCAAGTTGCCAGCATGGTCAGATCAAGTTGCCAGCATaGTCAGATTCTGGTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FFSFWRLGSLKSSCQHGQIKLPA*SDSGEG Trigger: GCCCTCACCAGAATCTGACCATGCTGGCAACTTGAT...CTGACCATGCTGGCAACTTGATTTCAGACTTCCCAGCCTCCAGAACGAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR TCA 90 bp | TTTTTCTCGTTCTGGAGGCTGGGAAGTCTGAAATCAAGTTGCCAGCATGGTCAGCACGTGAAAGGAACTTaGAGAAGGACGCTAATCTCA | + |
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Preference number: 4 (lower is better) Translates to: FFSFWRLGSLKSSCQHGQHVKGT*RRTLIS Trigger: TGAGATTAGCGTCCTTCTTCAAGTTCCTTTCACGTG...CTGACCATGCTGGCAACTTGATTTCAGACTTCCCAGCCTCCAGAACGAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR GCA 90 bp | AGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATATTGCAACCACTGTGCTaGCTTTCAACCAGGTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: RQFESGTFLGNPGYVVTILQPLC*LSTRFR Trigger: CCGAAACCTGGTTGAAAGGCAGCACAGTGGTTGCAA...TATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | GAAATCAAGTTGCCAGCATGGTCAGATTCTGGTGAGGGCTGTCTTCCTAGCTTGCAGATGGCCAAAAGTTaGTTTAGCTGTTTGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EIKLPAWSDSGEGCLPSLQMAKS*FSCLEH Trigger: ATGCTCCAAACAGCTAAACCAACTTTTGGCCATCTG...CAAGCTAGGAAGACAGCCCTCACCAGAATCTGACCATGCTGGCAACTTGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR CCA 90 bp | GAAATCAAGTTGCCAGCATGGTCAGATTCTGGTGAGGGCTGTCTTCCTAGCTTGTCCTCATCTGTCAGATaGCCAAAAGTTGGTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIKLPAWSDSGEGCLPSLSSSVR*PKVGLA Trigger: AGCTAAACCAACTTTTGGCCATCTGACAGATGAGGA...CAAGCTAGGAAGACAGCCCTCACCAGAATCTGACCATGCTGGCAACTTGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTTGCTTGAGAGGCAAATaGTCACTCTTTGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESGTFLGNPGYVVTIDQICLRGK*SLFACR Trigger: CCTGCAGGCAAAGAGTGATCATTTGCCTCTCAAGCA...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | GAAAGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACATTATACACGTTTGTTTaGGGTCGAGCTAGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERQFESGTFLGNPGYVVTLYTFV*GRARPF Trigger: GAAAGGCCTAGCTCGACCTCAAACAAACGTGTATAA...TGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | GAAAGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAAAGCTGTGGAAACTCTaGGATATGAACGAGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERQFESGTFLGNPGYVVTKLWKL*DMNESG Trigger: ACCAGACTCGTTCATATCTCAGAGTTTCCACAGCTT...TGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | GAAATCAAGTTGCCAGCATGGTCAGATTCTGGTGAGGGCTGTCTTCCTAGCTTGCTTGCTCATTCCAAGTaGATAAGGATGCTGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: EIKLPAWSDSGEGCLPSLLAHSK*IRMLLF Trigger: GAATAACAGCATCCTTATTCACTTGGAATGAGCAAG...CAAGCTAGGAAGACAGCCCTCACCAGAATCTGACCATGCTGGCAACTTGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR GCA 90 bp | TTTTTCTCGTTCTGGAGGCTGGGAAGTCTGAAATCAAGTTGCCAGCATGGTCAGGTTTGGAGCATAAGTTaGTTGGTCACTGGGTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FFSFWRLGSLKSSCQHGQVWSIS*LVTGSN Trigger: ATTAGACCCAGTGACCAAGCAACTTATGCTCCAAAC...CTGACCATGCTGGCAACTTGATTTCAGACTTCCCAGCCTCCAGAACGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR CCA 90 bp | TTTTTCTCGTTCTGGAGGCTGGGAAGTCTGAAATCAAGTTGCCAGCATGGTCAGGTTGGTTTAGCTGTTTaGAGCATAAGTTGCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FFSFWRLGSLKSSCQHGQVGLAV*SISCLV Trigger: GACCAAGCAACTTATGCTCCAAACAGCTAAACCAAC...CTGACCATGCTGGCAACTTGATTTCAGACTTCCCAGCCTCCAGAACGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTAAGTTTGGTATACTGTaGAGTGGAGGAGGAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIKFGIL*SGGGGT Trigger: TGTGCCTCCTCCTCCACTTCACAGTATACCAAACTT...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | AGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATCCTCTTTGCCTTCATTaGGTTCCCTTTGTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGTFLGNPGYVVTIDQIHPLCLH*VPFVPP Trigger: AGGAGGAACAAAGGGAACTCAATGAAGGCAAAGAGG...ATGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | AGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATCCACCATGTGCTCTCTaGACATGGACAGCTATATTG | + |
|
Preference number: 4 (lower is better) Translates to: SGTFLGNPGYVVTIDQIHPPCAL*TWTAIL Trigger: CAATATAGCTGTCCATGTTCAGAGAGCACATGGTGG...ATGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAGAGCTGATAAGATATTaGTCATACTCCGGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ERQFESGTFLGNPGYVVTELIRY*SYSGCV Trigger: AACACAGCCGGAGTATGAGCAATATCTTATCAGCTC...TGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR GCA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTAATATGGCCACCATGTaGTCTCTGAACATGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESGTFLGNPGYVVTIDQINMATM*SLNMDS Trigger: GCTGTCCATGTTCAGAGAGCACATGGTGGCCATATT...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | GAAAGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAAGTTTTGTGTTCATATaGCGTCCTGTGAATGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERQFESGTFLGNPGYVVTSFVFI*RPVNGQ Trigger: TTGCCCATTCACAGGACGCCATATGAACACAAAACT...TGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTAAGGCAATTCGAAAGTaGGACTTTCCTGGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIKAIRK*DFPGES Trigger: GGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCTT...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTGTTTCCGATTCATTCTaGGGCATAACTTCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIVSDSF*GITSRV Trigger: GACTCTGGAAGTTATGCCTCAGAATGAATCGGAAAC...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCACACGTGAAAGGAACTTaGAGAAGGACGCTAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KWDFPGESRICSHNRPNSHVKGT*RRTLIS Trigger: TGAGATTAGCGTCCTTCTTCAAGTTCCTTTCACGTG...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR GCA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCAGTGAGACAAAATAGCTaGTGGAAGAGAAGACATCGG | + |
|
Preference number: 4 (lower is better) Translates to: KWDFPGESRICSHNRPNSVRQNS*WKRRHR Trigger: CCGATGTCTTCTCTTCCAGCAGCTATTTTGTCTCAC...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR GCA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCACATTTGCAACCACTGTaGTGCCTTTCAACCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KWDFPGESRICSHNRPNSHLQPL*CLSTRF Trigger: AAACCTGGTTGAAAGGCAGCACAGTGGTTGCAAATG...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | AGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAAGACAAAATAGCTGCTaGAAGAGAAGACATCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQFESGTFLGNPGYVVTIRQNSC*KRRHRH Trigger: ATGCCGATGTCTTCTCTTCCAGCAGCTATTTTGTCT...TATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTTGGTATACTGTGAAGTaGAGGAGGAGGCACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIWYTVK*RRRHIV Trigger: AACAATGTGCCTCCTCCTCCACTTCACAGTATACCA...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTTCATATGGCGTCCTGTaGATGGGCAATTTCTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: ESGTFLGNPGYVVTIDQISYGVL*MGNFFK Trigger: CTTAAAGAAATTGCCCATTCACAGGACGCCATATGA...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | AGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATTATGAACGAGTCTGGTaGATCACTTCCTTCAATCAG | + |
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Preference number: 4 (lower is better) Translates to: SGTFLGNPGYVVTIDQIHYERVW*ITSFNQ Trigger: CTGATTGAAGGAAGTGATTCACCAGACTCGTTCATA...ATGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTATTCTTCACTCCAAATaGAGCTGTGGAAACTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIILHSK*SCGNSE Trigger: CTCAGAGTTTCCACAGCTTCATTTGGAGTGAAGAAT...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | GAAAGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAAGACTTTTTCAAGTTTaGTATACTGTGAAGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ERQFESGTFLGNPGYVVTRLFQV*YTVKWR Trigger: CCTCCACTTCACAGTATACCAAACTTGAAAAAGTCT...TGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | AGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATGGAAGTCTGGGTTTTTaGTGCAGGAATACTTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SGTFLGNPGYVVTIDQIHGSLGF*CRNTLG Trigger: TCCTAAAGTATTCCTGCACCAAAAACCCAGACTTCC...ATGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATTAATAGCTGTCATGTaGGACAAAATAGCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KWDFPGESRICSHNRPNSLIAVM*DKIAAG Trigger: TCCAGCAGCTATTTTGTCTCACATGACAGCTATTAA...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATGTTGTCCTCTAATGTaGCATAATGCATTCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: KWDFPGESRICSHNRPNSCCPLM*HNAFNW Trigger: CCAGTTGAATGCATTATGCCACATTAGAGGACAACA...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR GCA 90 bp | AGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATCTTTGCATATCCCTTTaGTGGGATTTTAAGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: SGTFLGNPGYVVTIDQIHLCISL*WDFKNF Trigger: GAAATTCTTAAAATCCCAGCAAAGGGATATGCAAAG...ATGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CCA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATGCATATCCCTTTGCTaGGATTTTAAGAATTTCACA | + |
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Preference number: 4 (lower is better) Translates to: KWDFPGESRICSHNRPNSCISLC*DFKNFT Trigger: TGTGAAATTCTTAAAATCCCAGCAAAGGGATATGCA...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR TCA 90 bp | CTTGTAGATTTTTGTCTTCTTGCTGTATCCTCTTTTGTTACTAGACCAGTGAATTTGTTACTAGACCAGTaGATTTTCTTGCTCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: LVDFCLLAVSSFVTRPVNLLLDQ*IFLLIP Trigger: TGGAATGAGCAAGAAAATTCACTGGTCTAGTAACAA...ATTCACTGGTCTAGTAACAAAAGAGGATACAGCAAGAAGACAAAAATCTACAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR CAA 90 bp | GAAATCAAGTTGCCAGCATGGTCAGATTCTGGTGAGGGCTGTCTTCCTAGCTTGGCACGTGAAAGGAACTaGAAGAAGGACGCTAATCTC | + |
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Preference number: 5 (lower is better) Translates to: EIKLPAWSDSGEGCLPSLARERN*KKDANL Trigger: GAGATTAGCGTCCTTCTTCAAGTTCCTTTCACGTGC...CAAGCTAGGAAGACAGCCCTCACCAGAATCTGACCATGCTGGCAACTTGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR CAA 90 bp | TTTTTCTCGTTCTGGAGGCTGGGAAGTCTGAAATCAAGTTGCCAGCATGGTCAGTGGAGCATAAGTTGCTaGGTCACTGGGTCTAATTCA | + |
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Preference number: 5 (lower is better) Translates to: FFSFWRLGSLKSSCQHGQWSISC*VTGSNS Trigger: TGAATTAGACCCAGTGACCAAGCAACTTATGCTCCA...CTGACCATGCTGGCAACTTGATTTCAGACTTCCCAGCCTCCAGAACGAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS-3UTR CAA 90 bp | GAAATCAAGTTGCCAGCATGGTCAGATTCTGGTGAGGGCTGTCTTCCTAGCTTGAGTTGGTTTAGCTGTTaGGAGCATAAGTTGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: EIKLPAWSDSGEGCLPSLSWFSC*EHKLLG Trigger: ACCAAGCAACTTATGCTCCAAACAGCTAAACCAACT...CAAGCTAGGAAGACAGCCCTCACCAGAATCTGACCATGCTGGCAACTTGATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS GCA 90 bp | AGGAGGAGGCACATTGTTAATAGCTGTCATGTGAGACAAAATAGCTaGTGGAAGAGAAGACATCGGCATCTTGATGGCTCAAAGGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: RRRHIVNSCHVRQNS*WKRRHRHLDGSKAD Trigger: ATCTGCCTTTGAGCCATCAAGATGCCGATGTCTTCTCTTCCAGCAGCTATTTTGTCTCACATGACAGCTATTAACAATGTGCCTCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | GAAAGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAAGGAAGTCTGGGTTTTaGGTGCAGGAATACTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: ERQFESGTFLGNPGYVVTRKSGF*VQEYFR Trigger: CCTAAAGTATTCCTGCACCAAAAACCCAGACTTCCT...TGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | GAAATCAAGTTGCCAGCATGGTCAGATTCTGGTGAGGGCTGTCTTCCTAGCTTGCTAGCTTGTAGATTTTaGTCTTCTTGCTGTATCCTC | + |
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Preference number: 5 (lower is better) Translates to: EIKLPAWSDSGEGCLPSLLACRF*SSCCIL Trigger: GAGGATACAGCAAGAAGACAAAAATCTACAAGCTAG...CAAGCTAGGAAGACAGCCCTCACCAGAATCTGACCATGCTGGCAACTTGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS CCA 90 bp | AGGAGGCACATTGTTAATAGCTGTCATGTGAGACAAAATAGCTGCTaGAAGAGAAGACATCGGCATCTTGATGGCTCAAAGGCAGATAGA | + |
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Preference number: 5 (lower is better) Translates to: RRHIVNSCHVRQNSC*KRRHRHLDGSKADR Trigger: TCTATCTGCCTTTGAGCCATCAAGATGCCGATGTCTTCTCTTCCAGCAGCTATTTTGTCTCACATGACAGCTATTAACAATGTGCCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCAGAAGACATCGGCATCTaGATGGCTCAAAGGCAGATA | + |
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Preference number: 5 (lower is better) Translates to: KWDFPGESRICSHNRPNSEDIGI*MAQRQI Trigger: TATCTGCCTTTGAGCCATCAAGATGCCGATGTCTTC...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATCCTCTTTGCCTTCATaGAGTTCCCTTTGTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: KWDFPGESRICSHNRPNSSSLPS*SSLCSS Trigger: GGAGGAACAAAGGGAACTCAATGAAGGCAAAGAGGA...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | GAAAGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATCAGGTTGTTGATGTaGACTTTCCTCTTTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ERQFESGTFLGNPGYVVTIRLLM*TFLFAF Trigger: GAAGGCAAAGAGGAAAGTCAACATCAACAACCTGAT...TGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTGCACGTGAAAGGAACTaGAAGAAGGACGCTAATCTC | + |
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Preference number: 5 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIARERN*KKDANL Trigger: GAGATTAGCGTCCTTCTTCAAGTTCCTTTCACGTGC...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS CCA 90 bp | TTGACATCCTCATCTGTCAGATGGCCAAAAGTTGGTTTAGCTGTTTaGAGCATAAGTTGCTTGGTCACTGGGTCTAATTCAAATAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LTSSSVRWPKVGLAV*SISCLVTGSNSNRS Trigger: GGACCTATTTGAATTAGACCCAGTGACCAAGCAACTTATGCTCCAAACAGCTAAACCAACTTTTGGCCATCTGACAGATGAGGATGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000521593.5 ENST00000523299.5 |
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| CDS-3UTR CAA 90 bp | AAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCAAACTTCCACACAGTTTaGTGTTCATATGGCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: KWDFPGESRICSHNRPNSNFHTV*CSYGVL Trigger: CAGGACGCCATATGAACACAAAACTGTGTGGAAGTT...TGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | AGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGATTTTTATACACGTTaGTTTGAGGTCGAGCTAGGC | + |
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Preference number: 5 (lower is better) Translates to: RQFESGTFLGNPGYVVTIDFYTR*FEVELG Trigger: GCCTAGCTCGACCTCAAACAAACGTGTATAAAAATC...TATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS GCA 90 bp | TCTGTCAGATGGCCAAAAGTTGGTTTAGCTGTTTGGAGCATAAGTTaGTTGGTCACTGGGTCTAATTCAAATAGGTCCTTATCTTCAATG | + |
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Preference number: 5 (lower is better) Translates to: SVRWPKVGLAVWSIS*LVTGSNSNRSLSSM Trigger: CATTGAAGATAAGGACCTATTTGAATTAGACCCAGTGACCAAGCAACTTATGCTCCAAACAGCTAAACCAACTTTTGGCCATCTGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000521593.5 ENST00000523299.5 |
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| CDS-3UTR CAA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTTTCATTGAGTTCCCTTaGTTCCTCCTGTTTGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIFIEFP*FLLFEK Trigger: CTTTTCAAACAGGAGGAACAAAGGGAACTCAATGAA...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | AGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAAGAATCATCAGGTTGTaGATGTTGACTTTCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: RQFESGTFLGNPGYVVTIRIIRL*MLTFLF Trigger: AAAGAGGAAAGTCAACATCAACAACCTGATGATTCT...TATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTGTTAGAATCATCAGGTaGTTGATGTTGACTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIVRIIR*LMLTFL Trigger: GAGGAAAGTCAACATCAACAACCTGATGATTCTAAC...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | AGGCAATTCGAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAAGGTTAAATCTGGAATaGTTTTCAGGAACTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: RQFESGTFLGNPGYVVTIRLNLE*FSGTST Trigger: TGTGGAAGTTCCTGAAAACAATTCCAGATTTAACCT...TATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCGAATTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | AGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATCCAAAGGTACTCCATTaGCTAAGCATTGAGTCATAT | + |
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Preference number: 5 (lower is better) Translates to: SGTFLGNPGYVVTIDQIHPKVLH*LSIESY Trigger: ATATGACTCAATGCTTAGCAAATGGAGTACCTTTGG...ATGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | AGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTCATACATGGACAGCTATATaGTTAGAATCATCAGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: SGTFLGNPGYVVTIDQIHTWTAI*LESSGC Trigger: ACAACCTGATGATTCTAACAATATAGCTGTCCATGT...ATGAATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS-3UTR CAA 90 bp | GAAAGTGGGACTTTCCTGGGGAATCCAGGATATGTAGTCACAATAGACCAAATTATCTCAACTTCTTTTTaGGTAATGATTGTGCACGTG | + |
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Preference number: 5 (lower is better) Translates to: ESGTFLGNPGYVVTIDQIISTSF*VMIVHV Trigger: CACGTGCACAATCATTACCAAAAAAGAAGTTGAGAT...AATTTGGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518476.6 |
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| CDS TCA 90 bp | TTTTGGTGCAGGAATACTTTAGGATATTGCTTCATAAATGTATCGTaGGCTGATAAGATATTGCTCATACTCCGGCTGTGTTGTCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: FWCRNTLGYCFINVS*ADKILLILRLCCPL Trigger: TAGAGGACAACACAGCCGGAGTATGAGCAATATCTTATCAGCTCACGATACATTTATGAAGCAATATCCTAAAGTATTCCTGCACCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS TCA 90 bp | ACTCCAAATGAAGCTGTGGAAACTCTGAGATATGAACGAGTCTGGTaGATCACTTCCTTCAATCAGATTTTTATACACGTTTGTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TPNEAVETLRYERVW*ITSFNQIFIHVCLR Trigger: CCTCAAACAAACGTGTATAAAAATCTGATTGAAGGAAGTGATTCACCAGACTCGTTCATATCTCAGAGTTTCCACAGCTTCATTTGGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000518476.6 ENST00000522105.1 ENST00000522427.1 ENST00000620844.1 |
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| CDS TCA 90 bp | GTAGAGTTTTTGAATTCTTCACTCCAAATGAAGCTGTGGAAACTCTaGGATATGAACGAGTCTGGTGAATCACTTCCTTCAATCAGATTT | + |
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Preference number: 5 (lower is better) Translates to: VEFLNSSLQMKLWKL*DMNESGESLPSIRF Trigger: AAATCTGATTGAAGGAAGTGATTCACCAGACTCGTTCATATCTCAGAGTTTCCACAGCTTCATTTGGAGTGAAGAATTCAAAAACTCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000518476.6 ENST00000522105.1 ENST00000522427.1 ENST00000620844.1 |
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| CDS-3UTR CAA 90 bp | CTTGTAGATTTTTGTCTTCTTGCTGTATCCTCTTTTGTTACTAGACCAGTGAATATCTCAACTTCTTTTTaGGTAATGATTGTGCACGTG | + |
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Preference number: 5 (lower is better) Translates to: LVDFCLLAVSSFVTRPVNISTSF*VMIVHV Trigger: CACGTGCACAATCATTACCAAAAAAGAAGTTGAGAT...ATTCACTGGTCTAGTAACAAAAGAGGATACAGCAAGAAGACAAAAATCTACAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000521593.5 |
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| CDS TCA 72 bp | AGTGGAGGAGGAGGCACATTGTTAATAGCTGTCATGTaGGACAAAATAGCTGCTGGAAGAGAAGACATCGGC | + |
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Preference number: 6 (lower is better) Translates to: SGGGGTLLIAVM*DKIAAGREDIG Trigger: GCCGATGTCTTCTCTTCCAGCAGCTATTTTGTCTCACATGACAGCTATTAACAATGTGCCTCCTCCTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS TCA 72 bp | GTCACCACCGAGAACATCTGTGTTTCCGATTCATTCTaGGGCATAACTTCCAGAGTCCCAAAGGTACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VTTENICVSDSF*GITSRVPKVLH Trigger: ATGGAGTACCTTTGGGACTCTGGAAGTTATGCCTCAGAATGAATCGGAAACACAGATGTTCTCGGTGGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518476.6 ENST00000620844.1 |
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| CDS TCA 72 bp | AACTTCCACACAGTTTTGTGTTCATATGGCGTCCTGTaGATGGGCCTAGAGACATCCCACAGCTGTAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: NFHTVLCSYGVL*MGLETSHSCKD Trigger: ATCTTTACAGCTGTGGGATGTCTCTAGGCCCATTCACAGGACGCCATATGAACACAAAACTGTGTGGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522427.1 |
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| CDS CCA 72 bp | TCATCTGTCAGATGGCCAAAAGTTGGTTTAGCTGTTTaGAGCATAAGTTGCTTGGTCACTGGGTCTAATTCA | + |
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Preference number: 6 (lower is better) Translates to: SSVRWPKVGLAV*SISCLVTGSNS Trigger: TGAATTAGACCCAGTGACCAAGCAACTTATGCTCCAAACAGCTAAACCAACTTTTGGCCATCTGACAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000521593.5 ENST00000523299.5 |
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| CDS GCA 72 bp | TGGCCAAAAGTTGGTTTAGCTGTTTGGAGCATAAGTTaGTTGGTCACTGGGTCTAATTCAAATAGGTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: WPKVGLAVWSIS*LVTGSNSNRSL Trigger: TAAGGACCTATTTGAATTAGACCCAGTGACCAAGCAACTTATGCTCCAAACAGCTAAACCAACTTTTGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000521593.5 ENST00000523299.5 |
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| CDS CCA 72 bp | GTGCTTAGACTTTTTCAAGTTTGGTATACTGTGAAGTaGAGGAGGAGGCACATTGTTAATAGCTGTCATGTG | + |
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Preference number: 6 (lower is better) Translates to: VLRLFQVWYTVK*RRRHIVNSCHV Trigger: CACATGACAGCTATTAACAATGTGCCTCCTCCTCCACTTCACAGTATACCAAACTTGAAAAAGTCTAAGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS CAA 90 bp | CTGAACATGGACAGCTATATTGTTAGAATCATCAGGTTGTTGATGTaGACTTTCCTCTTTGCCTTCATTGAGTTCCCTTTGTTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LNMDSYIVRIIRLLM*TFLFAFIEFPLFLL Trigger: CAGGAGGAACAAAGGGAACTCAATGAAGGCAAAGAGGAAAGTCAACATCAACAACCTGATGATTCTAACAATATAGCTGTCCATGTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS CAA 90 bp | TGCTCTCTGAACATGGACAGCTATATTGTTAGAATCATCAGGTTGTaGATGTTGACTTTCCTCTTTGCCTTCATTGAGTTCCCTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: CSLNMDSYIVRIIRL*MLTFLFAFIEFPLF Trigger: GAACAAAGGGAACTCAATGAAGGCAAAGAGGAAAGTCAACATCAACAACCTGATGATTCTAACAATATAGCTGTCCATGTTCAGAGAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS CAA 90 bp | ATGTGCTCTCTGAACATGGACAGCTATATTGTTAGAATCATCAGGTaGTTGATGTTGACTTTCCTCTTTGCCTTCATTGAGTTCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MCSLNMDSYIVRIIR*LMLTFLFAFIEFPL Trigger: CAAAGGGAACTCAATGAAGGCAAAGAGGAAAGTCAACATCAACAACCTGATGATTCTAACAATATAGCTGTCCATGTTCAGAGAGCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS TCA 72 bp | TTGAATTCTTCACTCCAAATGAAGCTGTGGAAACTCTaGGATATGAACGAGTCTGGTGAATCACTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LNSSLQMKLWKL*DMNESGESLPS Trigger: TGAAGGAAGTGATTCACCAGACTCGTTCATATCTCAGAGTTTCCACAGCTTCATTTGGAGTGAAGAATTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000518476.6 ENST00000522105.1 ENST00000522427.1 ENST00000620844.1 |
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| CDS TCA 72 bp | GAAGCTGTGGAAACTCTGAGATATGAACGAGTCTGGTaGATCACTTCCTTCAATCAGATTTTTATACACGTT | + |
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Preference number: 6 (lower is better) Translates to: EAVETLRYERVW*ITSFNQIFIHV Trigger: AACGTGTATAAAAATCTGATTGAAGGAAGTGATTCACCAGACTCGTTCATATCTCAGAGTTTCCACAGCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000518476.6 ENST00000522105.1 ENST00000522427.1 ENST00000620844.1 |
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| CDS CAA 90 bp | TTCCCTTTGTTCCTCCTGTTTGAAAAGTTTAGGAAGTCTGGGTTTTaGGTGCAGGAATACTTTAGGATATTGCTTCATAAATGTATCGTG | + |
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Preference number: 6 (lower is better) Translates to: FPLFLLFEKFRKSGF*VQEYFRILLHKCIV Trigger: CACGATACATTTATGAAGCAATATCCTAAAGTATTCCTGCACCAAAAACCCAGACTTCCTAAACTTTTCAAACAGGAGGAACAAAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS CAA 90 bp | ACGAGTCTGGTGAATCACTTCCTTCAATCAGATTTTTATACACGTTaGTTTGAGGTCGAGCTAGGCCTTTCAGTATTACATAAAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: TSLVNHFLQSDFYTR*FEVELGLSVLHKIH Trigger: ATGGATTTTATGTAATACTGAAAGGCCTAGCTCGACCTCAAACAAACGTGTATAAAAATCTGATTGAAGGAAGTGATTCACCAGACTCGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000518476.6 ENST00000522105.1 ENST00000522427.1 ENST00000620844.1 |
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| CDS TCA 72 bp | AGGAATACTTTAGGATATTGCTTCATAAATGTATCGTaGGCTGATAAGATATTGCTCATACTCCGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RNTLGYCFINVS*ADKILLILRLC Trigger: ACACAGCCGGAGTATGAGCAATATCTTATCAGCTCACGATACATTTATGAAGCAATATCCTAAAGTATTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS TCA 72 bp | TTTGGTCTATATAAAATATGGCCACCATGTGCTCTCTaGACATGGACAGCTATATTGTTAGAATCATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: FGLYKIWPPCAL*TWTAILLESSG Trigger: ACCTGATGATTCTAACAATATAGCTGTCCATGTTCAGAGAGCACATGGTGGCCATATTTTATATAGACCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS CAA 72 bp | GTGAATCACTTCCTTCAATCAGATTTTTATACACGTTaGTTTGAGGTCGAGCTAGGCCTTTCAGTATTACAT | + |
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Preference number: 6 (lower is better) Translates to: VNHFLQSDFYTR*FEVELGLSVLH Trigger: ATGTAATACTGAAAGGCCTAGCTCGACCTCAAACAAACGTGTATAAAAATCTGATTGAAGGAAGTGATTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000518476.6 ENST00000522105.1 ENST00000522427.1 ENST00000620844.1 |
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| CDS CCA 72 bp | TCCTCCTGTTTGAAAAGTTTAGGAAGTCTGGGTTTTTaGTGCAGGAATACTTTAGGATATTGCTTCATAAAT | + |
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Preference number: 6 (lower is better) Translates to: SSCLKSLGSLGF*CRNTLGYCFIN Trigger: ATTTATGAAGCAATATCCTAAAGTATTCCTGCACCAAAAACCCAGACTTCCTAAACTTTTCAAACAGGAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS CAA 72 bp | TTCCTCCTGTTTGAAAAGTTTAGGAAGTCTGGGTTTTaGGTGCAGGAATACTTTAGGATATTGCTTCATAAA | + |
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Preference number: 6 (lower is better) Translates to: FLLFEKFRKSGF*VQEYFRILLHK Trigger: TTTATGAAGCAATATCCTAAAGTATTCCTGCACCAAAAACCCAGACTTCCTAAACTTTTCAAACAGGAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517748.1 ENST00000518476.6 |
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| CDS CAA 72 bp | GATGCTTATCATTTAGCTGAAAGGTTAAATCTGGAATaGTTTTCAGGAACTTCCACACAGTTTTGTGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: DAYHLAERLNLE*FSGTSTQFCVH Trigger: ATGAACACAAAACTGTGTGGAAGTTCCTGAAAACAATTCCAGATTTAACCTTTCAGCTAAATGATAAGCATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000518476.6 ENST00000522427.1 ENST00000620844.1 |
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