RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CMTM4 (Homo sapiens)

Ensembl gene IDs: ENSG00000183723

Ensembl transcript IDs: ENST00000330687.8, ENST00000394106.7, ENST00000561680.5, ENST00000563952.1

Found 607 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTaGCCTCACATCTGCCAGCCCTCAGGCCGGCCAGGTCTCCCTTCA +
Preference number: 1 (lower is better)
Translates to: PPLGLGQPTSPSQVS*PHICQPSGRPGLPS
Trigger: TGAAGGGAGACCTGGCCGGCCTGAGGGCTGGCAGATGTGAGGGCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR GCA 90 bp GAGGTCCCCCAGGAAGCTTCCCACTCTGCAGTGGCAGGAAGGCCATaGCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: EVPQEASHSAVAGRP*LCRTLALILEGAQA
Trigger: GGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGCAGAGTGGGAAGCTTCCTGGGGGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR GCA 90 bp CCCCAGGAAGCTTCCCACTCTGCAGTGGCAGGAAGGCCATGCCTCTaGAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAA +
Preference number: 1 (lower is better)
Translates to: PQEASHSAVAGRPCL*RTLALILEGAQARE
Trigger: TTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGCAGAGTGGGAAGCTTCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR CCA 90 bp TCCAGGCCACTGCTTCCTCCCTTATCTCCCAGACCTGGCCGTGTGTaGACCTCACCAGCCTACCAAGCTGTTGGGCCTGGACGTGGGTGC +
Preference number: 1 (lower is better)
Translates to: SRPLLPPLSPRPGRV*TSPAYQAVGPGRGC
Trigger: GCACCCACGTCCAGGCCCAACAGCTTGGTAGGCTGGTGAGGTCCACACACGGCCAGGTCTGGGAGATAAGGGAGGAAGCAGTGGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 90 bp CTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCCCTCACATCTaGCAGCCCTCAGGCCGGCCAGGTCTCCCTTCAAACCCTGAGTAT +
Preference number: 1 (lower is better)
Translates to: LGQPTSPSQVSCPHI*QPSGRPGLPSNPEY
Trigger: ATACTCAGGGTTTGAAGGGAGACCTGGCCGGCCTGAGGGCTGGCAGATGTGAGGGCAGGACACCTGGGATGGACTCGTAGGCTGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR TCA 90 bp ACTCTGCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTaGTTCTGGAAGGGGCCCAGGCCAGAGAATACACTTGGGCTCAGT +
Preference number: 1 (lower is better)
Translates to: TLQWQEGHASAGRSH*FWKGPRPENTLGLS
Trigger: ACTGAGCCCAAGTGTATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR GCA 90 bp TGGCTTCCCAGGGCCAAGCGCTCAGAGCTGGGCCGGACTTGCCCATaGTGGCTTCAGCTCACATTGCCAAGGAAGATGTGTATTGGGGCT +
Preference number: 1 (lower is better)
Translates to: WLPRAKRSELGRTCP*WLQLTLPRKMCIGA
Trigger: AGCCCCAATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTCTGAGCGCTTGGCCCTGGGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 90 bp TGCCGCTGGCTTCCCAGGGCCAAGCGCTCAGAGCTGGGCCGGACTTaGCCATGCTGGCTTCAGCTCACATTGCCAAGGAAGATGTGTATT +
Preference number: 1 (lower is better)
Translates to: CRWLPRAKRSELGRT*PCWLQLTLPRKMCI
Trigger: AATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTCTGAGCGCTTGGCCCTGGGAAGCCAGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 90 bp ACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATACACTTaGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGAGCCGGACA +
Preference number: 1 (lower is better)
Translates to: TLALILEGAQAREYT*AQFTSPNHRGRSRT
Trigger: TGTCCGGCTCCTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR CCA 90 bp TGGGCTGGATCCCAGCACGCAGACTCAACACTGACTTGGAGCAGGTaGTGCCTAAGGCTGCCTGAGAACCACTGCCGACTGACCGTTCCA +
Preference number: 1 (lower is better)
Translates to: WAGSQHADSTLTWSR*CLRLPENHCRLTVP
Trigger: TGGAACGGTCAGTCGGCAGTGGTTCTCAGGCAGCCTTAGGCACCACCTGCTCCAAGTCAGTGTTGAGTCTGCGTGCTGGGATCCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 90 bp GATGAGGAGTGGGCTGGATCCCAGCACGCAGACTCAACACTGACTTaGAGCAGGTGGTGCCTAAGGCTGCCTGAGAACCACTGCCGACTG +
Preference number: 1 (lower is better)
Translates to: DEEWAGSQHADSTLT*SRWCLRLPENHCRL
Trigger: CAGTCGGCAGTGGTTCTCAGGCAGCCTTAGGCACCACCTGCTCCAAGTCAGTGTTGAGTCTGCGTGCTGGGATCCAGCCCACTCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 90 bp GCAGGGTCAGCCCCTGAGGCAGACGTGGTGCTCAGCCACATAGCCTaGGACACTGCTCCCAACTCAGATCGTACTGAAGGTGTTGGTGCA +
Preference number: 1 (lower is better)
Translates to: AGSAPEADVVLSHIA*DTAPNSDRTEGVGA
Trigger: TGCACCAACACCTTCAGTACGATCTGAGTTGGGAGCAGTGTCCCAGGCTATGTGGCTGAGCACCACGTCTGCCTCAGGGGCTGACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 90 bp CTTCCCAGGGCCAAGCGCTCAGAGCTGGGCCGGACTTGCCCATGCTaGCTTCAGCTCACATTGCCAAGGAAGATGTGTATTGGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: LPRAKRSELGRTCPC*LQLTLPRKMCIGAV
Trigger: CACAGCCCCAATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTCTGAGCGCTTGGCCCTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 90 bp GCTCAGCCACATAGCCTGGGACACTGCTCCCAACTCAGATCGTACTaGAGGTGTTGGTGCAGGAAGCTAACCCCAACTCCGACCCCCAGC +
Preference number: 1 (lower is better)
Translates to: AQPHSLGHCSQLRSY*RCWCRKLTPTPTPS
Trigger: GCTGGGGGTCGGAGTTGGGGTTAGCTTCCTGCACCAACACCTTCAGTACGATCTGAGTTGGGAGCAGTGTCCCAGGCTATGTGGCTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 90 bp GCTCAGAGCTGGGCCGGACTTGCCCATGCTGGCTTCAGCTCACATTaGCAAGGAAGATGTGTATTGGGGCTGTGCAGGCTGCCACATTCT +
Preference number: 1 (lower is better)
Translates to: AQSWAGLAHAGFSSH*QGRCVLGLCRLPHS
Trigger: AGAATGTGGCAGCCTGCACAGCCCCAATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 90 bp AAAATGGGTTACAGAGTGAAAGAGTTGGGAACAGGCAGCCCCCTTTaGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCCCTC +
Preference number: 1 (lower is better)
Translates to: KMGYRVKELGTGSPL*AWVSLRVHPRCPAL
Trigger: GAGGGCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGTTCCCAACTCTTTCACTCTGTAACCCATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR TCA 90 bp CGCAGACTCAACACTGACTTGGAGCAGGTGGTGCCTAAGGCTGCCTaGGAACCACTGCCGACTGACCGTTCCAATGCTGTCCCTTCATTC +
Preference number: 1 (lower is better)
Translates to: RRLNTDLEQVVPKAA*EPLPTDRSNAVPSF
Trigger: GAATGAAGGGACAGCATTGGAACGGTCAGTCGGCAGTGGTTCTCAGGCAGCCTTAGGCACCACCTGCTCCAAGTCAGTGTTGAGTCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 90 bp TCACATCTGCCAGCCCTCAGGCCGGCCAGGTCTCCCTTCAAACCCTaGGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCT +
Preference number: 1 (lower is better)
Translates to: SHLPALRPARSPFKP*VFAFLTSAKRGTES
Trigger: AGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGGCCGGCCTGAGGGCTGGCAGATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
3UTR GCA 90 bp GCCAGCCCTCAGGCCGGCCAGGTCTCCCTTCAAACCCTGAGTATTTaGCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTT +
Preference number: 1 (lower is better)
Translates to: ASPQAGQVSLQTLSI*LPHFCEEGNRILKL
Trigger: AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGGCCGGCCTGAGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
3UTR TCA 90 bp TCCCCTCCTCACCATCCCTACGCGTCTCCTCACCATCCCTACGCGTaGCTGACTTTCCTGATAAAAATGGGATACTTCCTACTGGGTGTC +
Preference number: 1 (lower is better)
Translates to: SPPHHPYASPHHPYA*LTFLIKMGYFLLGV
Trigger: GACACCCAGTAGGAAGTATCCCATTTTTATCAGGAAAGTCAGTCACGCGTAGGGATGGTGAGGAGACGCGTAGGGATGGTGAGGAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR TCA 90 bp CAGTCCACCTCTCAGAGCACATGGATAGGTGACGGGTTTCTCATGTaGATCTACAAGAAAAGGTACGCCTGGGCCACACGCAGGACATGG +
Preference number: 1 (lower is better)
Translates to: QSTSQSTWIGDGFLM*IYKKRYAWATRRTW
Trigger: CCATGTCCTGCGTGTGGCCCAGGCGTACCTTTTCTTGTAGATTCACATGAGAAACCCGTCACCTATCCATGTGCTCTGAGAGGTGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 90 bp ACACTGACTTGGAGCAGGTGGTGCCTAAGGCTGCCTGAGAACCACTaGCGACTGACCGTTCCAATGCTGTCCCTTCATTCCTTCATATTT +
Preference number: 1 (lower is better)
Translates to: TLTWSRWCLRLPENH*RLTVPMLSLHSFIF
Trigger: AAATATGAAGGAATGAAGGGACAGCATTGGAACGGTCAGTCGGCAGTGGTTCTCAGGCAGCCTTAGGCACCACCTGCTCCAAGTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 90 bp GCACAAAGGTGTTGGAGCTTGGTCTCCTCAGGCTTAACCCAAGGCTaGCTCACTAGGACAGCTTCCAAGAACCACAGATGTAACTGCAAA +
Preference number: 1 (lower is better)
Translates to: AQRCWSLVSSGLTQG*LTRTASKNHRCNCK
Trigger: TTTGCAGTTACATCTGTGGTTCTTGGAAGCTGTCCTAGTGAGTCAGCCTTGGGTTAAGCCTGAGGAGACCAAGCTCCAACACCTTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTaGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTCAGG +
Preference number: 1 (lower is better)
Translates to: EGEAKGAGEEYVSVS*CHLAPHSKQPVLFR
Trigger: CCTGAACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR CCA 90 bp TTGCCCATGCTGGCTTCAGCTCACATTGCCAAGGAAGATGTGTATTaGGGCTGTGCAGGCTGCCACATTCTTGCTTTTTCTGTAGACAAA +
Preference number: 1 (lower is better)
Translates to: LPMLASAHIAKEDVY*GCAGCHILAFSVDK
Trigger: TTTGTCTACAGAAAAAGCAAGAATGTGGCAGCCTGCACAGCCCCAATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 90 bp CACAAGCTAATGGCAGTCCCTGGAGCAGGAAGCAACTTGTTATTCTaGTCAAGAGAATCCACCAGCAGCTCTTGGCCTAGAAACTTTTTC +
Preference number: 1 (lower is better)
Translates to: HKLMAVPGAGSNLLF*SRESTSSSWPRNFF
Trigger: GAAAAAGTTTCTAGGCCAAGAGCTGCTGGTGGATTCTCTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCATTAGCTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 90 bp TGCTCTATTCATCTCCTAGGTGCTAAGACCAACCCACAGAAAATCTaGCACAGAAAGGGATTAGACCTCAGTCCACCTCTCAGAGCACAT +
Preference number: 1 (lower is better)
Translates to: CSIHLLGAKTNPQKI*HRKGLDLSPPLRAH
Trigger: ATGTGCTCTGAGAGGTGGACTGAGGTCTAATCCCTTTCTGTGCCAGATTTTCTGTGGGTTGGTCTTAGCACCTAGGAGATGAATAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 90 bp CCCTCCAGAACTTTCGTCACCACGTGGTCTATACATGATGACATGTaGAACCACACATTACATCAACTAGAAAGCGTCCATAGCACCACT +
Preference number: 1 (lower is better)
Translates to: PSRTFVTTWSIHDDM*NHTLHQLESVHSTT
Trigger: AGTGGTGCTATGGACGCTTTCTAGTTGATGTAATGTGTGGTTGCACATGTCATCATGTATAGACCACGTGGTGACGAAAGTTCTGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 90 bp CCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTaGTGCTACTCTTCTGTTTGTAAAATATGGAACCACTTTCTTTGT +
Preference number: 1 (lower is better)
Translates to: PASHHFTPKDRRSGL*CYSSVCKIWNHFLC
Trigger: ACAAAGAAAGTGGTTCCATATTTTACAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR GCA 90 bp GACTGTAATCCCTCTTTAAGGCAGGGAAAACATATTTCCCTCCCATaGCTTCAGCAGTGTGAAAGAAGGATATCAAAGAGAATCAGAGGG +
Preference number: 1 (lower is better)
Translates to: DCNPSLRQGKHISLP*LQQCERRISKRIRG
Trigger: CCCTCTGATTCTCTTTGATATCCTTCTTTCACACTGCTGAAGGCATGGGAGGGAAATATGTTTTCCCTGCCTTAAAGAGGGATTACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 90 bp TTCACCTTGGATAACCCTATTCCCTCCAGAACTTTCGTCACCACGTaGTCTATACATGATGACATGTGCAACCACACATTACATCAACTA +
Preference number: 1 (lower is better)
Translates to: FTLDNPIPSRTFVTT*SIHDDMCNHTLHQL
Trigger: TAGTTGATGTAATGTGTGGTTGCACATGTCATCATGTATAGACCACGTGGTGACGAAAGTTCTGGAGGGAATAGGGTTATCCAAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 90 bp AAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCAAACTTCTCTaGCGAGATTTTAATCTGAAACTGCATCTGTTCTTCCCAGCTTTA +
Preference number: 1 (lower is better)
Translates to: KSPPSDGCLLQIKLL*RDFNLKLHLFFPAL
Trigger: TAAAGCTGGGAAGAACAGATGCAGTTTCAGATTAAAATCTCGTCAGAGAAGTTTGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 90 bp ATGGCTGTTTACTTCAAATCAAACTTCTCTGACGAGATTTTAATCTaGAACTGCATCTGTTCTTCCCAGCTTTATGTGGGGCCAACAAGT +
Preference number: 1 (lower is better)
Translates to: MAVYFKSNFSDEILI*NCICSSQLYVGPTS
Trigger: ACTTGTTGGCCCCACATAAAGCTGGGAAGAACAGATGCAGTTTCAGATTAAAATCTCGTCAGAGAAGTTTGATTTGAAGTAAACAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 90 bp AGCACTGTCATCCTAAGGCAACTCAGACGTGATAGTTTTAGACTATaGTCAAATCTCACACAAACCATTATCAGAATCTTGTTTCACACC +
Preference number: 1 (lower is better)
Translates to: STVILRQLRRDSFRL*SNLTQTIIRILFHT
Trigger: GGTGTGAAACAAGATTCTGATAATGGTTTGTGTGAGATTTGATCATAGTCTAAAACTATCACGTCTGAGTTGCCTTAGGATGACAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR GCA 90 bp GCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGTGGGCTGGTGCTGGCTaGCTGGGGGCCCTGGCATGG +
Preference number: 2 (lower is better)
Translates to: AGRPCLCRTLALILEGAQWAGAG*LGALAW
Trigger: CCATGCCAGGGCCCCCAGGCAGCCAGCACCAGCCCA...CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp CAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGGCTGGGGGTGCCGCTaGCTTCCCAGGGCCAAGCGC +
Preference number: 2 (lower is better)
Translates to: QGKEPDTGLSPFYTQRQEGWGCR*LPRAKR
Trigger: GCGCTTGGCCCTGGGAAGCCAGCGGCACCCCCAGCC...CTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp GCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGAGTCAGGCCTCACCCTaGTGCAAGGGCACCAGCAGG +
Preference number: 2 (lower is better)
Translates to: AGRPCLCRTLALILEGAQSQASP*CKGTSR
Trigger: CCTGCTGGTGCCCTTGCACCAGGGTGAGGCCTGACT...CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp AACAGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCACAGGCAGCCCCCTTTaGGCCTGGGTCAGCCTACGA +
Preference number: 2 (lower is better)
Translates to: NRQPPLGLGQPTSPSQVSTGSPL*AWVSLR
Trigger: TCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGT...GGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR GCA 90 bp GCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGCAGGCCTCACCCTGGTaGAAGGGCACCAGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: AVAGRPCLCRTLALILEGQASPW*KGTSRS
Trigger: AGACCTGCTGGTGCCCTTGCACCAGGGTGAGGCCTG...CCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGCAGGACGCTCGCACTaGTTCTGGAAGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: QGKEPDTGLSPFYTQRQEAGRSH*FWKGPR
Trigger: CCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGC...CTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGAGCCCCGGAGCTGGCTaGGGTCCCCCAGGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKSPGAG*GPPGSF
Trigger: GAAGCTTCCTGGGGGACCTCAGCCAGCTCCGGGGCT...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR CAA 90 bp GTGCCGCTGGCTTCCCAGGGCCAAGCGCTCAGAGCTGGGCCGGACTaGCCCATGCTGGCTTCAGCTCACATTGCCAAGGAAGATGTGTAT +
Preference number: 2 (lower is better)
Translates to: VPLASQGQALRAGPD*PMLASAHIAKEDVY
Trigger: ATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTCTGAGCGCTTGGCCCTGGGAAGCCAGCGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp GGCCCCAACCCACTCCATACATACAGACTTGAACCCAAAAGCCAGGCCAGCCAGGATCCGAGTGGAAGATaGGAGCCCCGGAGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: GPNPLHTYRLEPKSQASQDPSGR*EPRSWL
Trigger: CAGCCAGCTCCGGGGCTCTCATCTTCCACTCGGATC...CTGGCTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGAGTGGGTTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR CAA 90 bp CGCTCAGAGCTGGGCCGGACTTGCCCATGCTGGCTTCAGCTCACATaGCCAAGGAAGATGTGTATTGGGGCTGTGCAGGCTGCCACATTC +
Preference number: 2 (lower is better)
Translates to: RSELGRTCPCWLQLT*PRKMCIGAVQAATF
Trigger: GAATGTGGCAGCCTGCACAGCCCCAATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTCTGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp GCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGAAAGAAAACTTGACTaGGAGACAGGCACGAGGACG +
Preference number: 2 (lower is better)
Translates to: AGRPCLCRTLALILEGAQERKLD*ETGTRT
Trigger: CGTCCTCGTGCCTGTCTCTCAGTCAAGTTTTCTTTC...CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATACGCAGACTCAACACTaGCTTGGAGCAGGTGGTGCC +
Preference number: 2 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHTQTQH*LGAGGA
Trigger: GGCACCACCTGCTCCAAGTCAGTGTTGAGTCTGCGT...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGCCCTGGCATGGAAGATaGGGAGTGGGCTGGATCCCA +
Preference number: 2 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRPWHGR*GVGWIP
Trigger: TGGGATCCAGCCCACTCCTCATCTTCCATGCCAGGG...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp GCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGAGGAGGTCAGGGCTCTaGTGCTACTCTTCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: AVAGRPCLCRTLALILEGRRSGL*CYSSVC
Trigger: ACAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCT...CCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp AACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCCCAAAATGGAAAGAAAACTTGACTaGGAGACAGGCACGAGGACG +
Preference number: 2 (lower is better)
Translates to: NSTADPPTGPLGKPFPKMERKLD*ETGTRT
Trigger: CGTCCTCGTGCCTGTCTCTCAGTCAAGTTTTCTTTC...CATTTTGGGAAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
3UTR-3UTR TCA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGAGAACCACTGCCGACTaGCCGTTCCAATGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRRTTAD*PFQCCP
Trigger: GGGACAGCATTGGAACGGTCAGTCGGCAGTGGTTCT...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp CCGAGCCTAGCCAGAGCATCCACAACGAACCAATCTGAGATCCGAGTGGAAGATCCATCCCAGGTGTCCTaGCCTCACATCTGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: PSLARASTTNQSEIRVEDPSQVS*PHICQP
Trigger: GGGCTGGCAGATGTGAGGGCAGGACACCTGGGATGG...ATCTTCCACTCGGATCTCAGATTGGTTCGTTGTGGATGCTCTGGCTAGGCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCAAGCCAAAGGCTCCCTaGCCTTTGTGTATTATGCAT +
Preference number: 2 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCKPKAP*PLCIMH
Trigger: ATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTT...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATCTCAGCCACATAGCCTaGGACACTGCTCCCAACTCA +
Preference number: 2 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHLSHIA*DTAPNS
Trigger: TGAGTTGGGAGCAGTGTCCCAGGCTATGTGGCTGAG...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp GCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGTCCCATCAGCAAAGCTaGCTAAGGTGGTCTGAGATA +
Preference number: 2 (lower is better)
Translates to: AVAGRPCLCRTLALILEGSHQQS*LRWSEI
Trigger: TATCTCAGACCACCTTAGTCAGCTTTGCTGATGGGA...CCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp GCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGAAATGGGTTACAGAGTaGAAGAGTTGGGAACAGGCA +
Preference number: 2 (lower is better)
Translates to: AGRPCLCRTLALILEGAQKWVTE*KSWEQA
Trigger: TGCCTGTTCCCAACTCTTTCACTCTGTAACCCATTT...CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATAGCAAAAGGAGCCGGTaGAGAGTACGTGTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHSKRSR*RVRVCV
Trigger: GACACAGACACGTACTCTTCACCGGCTCCTTTTGCT...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp GCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGAATCACATGGAAATCTaGCAGGACAAGGGAAAGAAA +
Preference number: 2 (lower is better)
Translates to: AAPQPQTLRNVGLPTPPRNHMEI*QDKGKK
Trigger: TTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATT...CCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
3UTR-3UTR TCA 90 bp GGCGTCTTCATATTCACCTTGGATAACCCTATTCCCTCCAGAACTTTCGTCACCCAGCACACCCAGCTGTaGGCTGGCCTGGCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: GVFIFTLDNPIPSRTFVTQHTQL*AGLAAL
Trigger: GAGGGCAGCCAGGCCAGCTCACAGCTGGGTGTGCTG...GGTGACGAAAGTTCTGGAGGGAATAGGGTTATCCAAGGTGAATATGAAGACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp GCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGTTAGTGTTTCTGCCATaGGTTCCTGAACCCCTACAA +
Preference number: 2 (lower is better)
Translates to: AGRPCLCRTLALILEGAQLVFLP*VPEPLQ
Trigger: TTGTAGGGGTTCAGGAACCCATGGCAGAAACACTAA...CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATAAATCTGAGATCCGAGTaGAAGATGAGAGCCCCGGAG +
Preference number: 2 (lower is better)
Translates to: MPLQDARTDSGRGPGQRINLRSE*KMRAPE
Trigger: CTCCGGGGCTCTCATCTTCCACTCGGATCTCAGATT...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCTGGCCCCCATATTCCTaGAGAAGAATCTGGGGTTCA +
Preference number: 2 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPWPPYS*RRIWGS
Trigger: TGAACCCCAGATTCTTCTCCAGGAATATGGGGGCCA...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 90 bp TGCCAGCCCTCAGGCCGGCCAGGTCTCCCTTCAAACCCTGAGTATTaGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCT +
Preference number: 2 (lower is better)
Translates to: CQPSGRPGLPSNPEY*PSSLLRRGEQNLEA
Trigger: AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGGCCGGCCTGAGGGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
3UTR CAA 90 bp CTCCCAGACCTGGCCGTGTGTGGACCTCACCAGCCTACCAAGCTGTaGGGCCTGGACGTGGGTGCTGATAAAATAAGACAAACCTGGAAA +
Preference number: 2 (lower is better)
Translates to: LPDLAVCGPHQPTKL*GLDVGADKIRQTWK
Trigger: TTTCCAGGTTTGTCTTATTTTATCAGCACCCACGTCCAGGCCCAACAGCTTGGTAGGCTGGTGAGGTCCACACACGGCCAGGTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGTCCTGCCCTCACATCTaGCAGCCCTCAGGCCGGCCA +
Preference number: 2 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLSCPHI*QPSGRP
Trigger: TGGCCGGCCTGAGGGCTGGCAGATGTGAGGGCAGGA...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATAGTCAGGCCTCACCCTaGTGCAAGGGCACCAGCAGG +
Preference number: 2 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHSQASP*CKGTSR
Trigger: CCTGCTGGTGCCCTTGCACCAGGGTGAGGCCTGACT...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp CAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTGCCTTCTGAAACATaGGTGGAAGGGTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: QGKEPDTGLSPFYTQRQEVPSET*VEGCVL
Trigger: CAGAACACACCCTTCCACCCATGTTTCAGAAGGCAC...CTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 90 bp TCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTaGTTCAGGCCTGAAGCCTGGAAAAGGCCGCCGAGCCTAGCCAGA +
Preference number: 2 (lower is better)
Translates to: SVSWCHLAPHSKQPV*FRPEAWKRPPSLAR
Trigger: TCTGGCTAGGCTCGGCGGCCTTTTCCAGGCTTCAGGCCTGAACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGAGGAGGTCAGGGCTCTaGTGCTACTCTTCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: QAREYTWAQFTSPNHRGRRRSGL*CYSSVC
Trigger: ACAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCT...CCTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CACATAAACCTAAGTTTGCCCAACGGGCATCGCCTCAGAAAGCCCACAGTTGTGCACACTCAACAGACCTaGCAGGCAGCACACCCAGCT +
Preference number: 2 (lower is better)
Translates to: HINLSLPNGHRLRKPTVVHTQQT*QAAHPA
Trigger: AGCTGGGTGTGCTGCCTGTCAGGTCTGTTGAGTGTG...CACAACTGTGGGCTTTCTGAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCCATCCCAGGTGTCCTaGCCTCACATCTGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNPSQVS*PHICQP
Trigger: GGGCTGGCAGATGTGAGGGCAGGACACCTGGGATGG...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCTTAGTGTTTCTGCCATaGGTTCCTGAACCCCTACAA +
Preference number: 2 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPLVFLP*VPEPLQ
Trigger: TTGTAGGGGTTCAGGAACCCATGGCAGAAACACTAA...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGTCTGCCATGGGTTCCTaGACCCCTACAAATTTCAAC +
Preference number: 2 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRSAMGS*TPTNFN
Trigger: GTTGAAATTTGTAGGGGTTCAGGAACCCATGGCAGA...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGTCTGCCATGGGTTCCTaGACCCCTACAAATTTCAAC +
Preference number: 2 (lower is better)
Translates to: QAREYTWAQFTSPNHRGRSAMGS*TPTNFN
Trigger: GTTGAAATTTGTAGGGGTTCAGGAACCCATGGCAGA...CCTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACAGCCCCGGAGCTGGCTaGGGTCCCCCAGGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: FICNGSASLLKGFGTRHNSPGAG*GPPGSF
Trigger: GAAGCTTCCTGGGGGACCTCAGCCAGCTCCGGGGCT...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CACATAAACCTAAGTTTGCCCAACGGGCATCGCCTCAGAAAGCCCACAGTTGTGTGTTTTGTTCAGGCCTaGAGCCTGGAAAAGGCCGCC +
Preference number: 2 (lower is better)
Translates to: HINLSLPNGHRLRKPTVVCFVQA*SLEKAA
Trigger: GGCGGCCTTTTCCAGGCTTCAGGCCTGAACAAAACA...CACAACTGTGGGCTTTCTGAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGACAATTAGTGCCTTCTaGAACATGGGTGGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: QAREYTWAQFTSPNHRGRTISAF*NMGGRV
Trigger: CACCCTTCCACCCATGTTTCAGAAGGCACTAATTGT...CCTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp CACATAAACCTAAGTTTGCCCAACGGGCATCGCCTCAGAAAGCCCACAGTTGTGCTGCCTGAGAACCACTaGCGACTGACCGTTCCAATG +
Preference number: 2 (lower is better)
Translates to: HINLSLPNGHRLRKPTVVLPENH*RLTVPM
Trigger: CATTGGAACGGTCAGTCGGCAGTGGTTCTCAGGCAG...CACAACTGTGGGCTTTCTGAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 90 bp AAAAGGTACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTaGTTCAGGTCTCATTCACTGCAAGCAAGAATTCACGTACATGAG +
Preference number: 2 (lower is better)
Translates to: KRYAWATRRTWHPLG*FRSHSLQARIHVHE
Trigger: CTCATGTACGTGAATTCTTGCTTGCAGTGAATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp CAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGCTGACTAAGGTGGTCTaGGATATGTTCTTACTCCTA +
Preference number: 2 (lower is better)
Translates to: QGKEPDTGLSPFYTQRQELTKVV*DMFLLL
Trigger: TAGGAGTAAGAACATATCTCAGACCACCTTAGTCAG...CTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCAGCAGGACGCTCGCACTaGTTCTGGAAGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSAGRSH*FWKGPR
Trigger: CCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGC...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGAATCTGAGATCCGAGTaGAAGATGAGAGCCCCGGAG +
Preference number: 2 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGNLRSE*KMRAPE
Trigger: CTCCGGGGCTCTCATCTTCCACTCGGATCTCAGATT...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp GCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGTGGAAGGGTGTGTTCTaGTGCAAATTCAAGTATTTT +
Preference number: 2 (lower is better)
Translates to: AVAGRPCLCRTLALILEGWKGVF*CKFKYF
Trigger: AAAATACTTGAATTTGCACCAGAACACACCCTTCCA...CCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGAGACCTGGCCGTGTGTaGACCTCACCAGCCTACCAA +
Preference number: 2 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLRPGRV*TSPAYQ
Trigger: TTGGTAGGCTGGTGAGGTCCACACACGGCCAGGTCT...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 90 bp TCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGAAAACTaGACTGAGAGACAGGCACGAGGACGGGAGGGAGGAGGATCCAGG +
Preference number: 2 (lower is better)
Translates to: STESHGNLTGQGKEN*TERQARGREGGGSR
Trigger: CCTGGATCCTCCTCCCTCCCGTCCTCGTGCCTGTCTCTCAGTCAAGTTTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
3UTR-3UTR TCA 90 bp GGCCCCAACCCACTCCATACATACAGACTTGAACCCAAAAGCCAGGCCAGCCAGTTCCAATTCCATGATTaGCAAGAGTGCTTATGCGAC +
Preference number: 2 (lower is better)
Translates to: GPNPLHTYRLEPKSQASQFQFHD*QECLCD
Trigger: GTCGCATAAGCACTCTTGTCAATCATGGAATTGGAA...CTGGCTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGAGTGGGTTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR GCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAACAGGCCTCACCCTGGTaGAAGGGCACCAGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKQASPW*KGTSRS
Trigger: AGACCTGCTGGTGCCCTTGCACCAGGGTGAGGCCTG...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR GCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAAGTGGCAGGAAGGCCATaGCTCTGCAGGACGCTCGCA +
Preference number: 2 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKVAGRP*LCRTLA
Trigger: TGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCAC...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATGTTTCAATAGCTCCCTaGGGGTCCAAGCCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHVSIAP*GSKPKA
Trigger: AGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAAC...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp CACATAAACCTAAGTTTGCCCAACGGGCATCGCCTCAGAAAGCCCACAGTTGTGTGGGATACTTCCTACTaGGTGTCAGCACTGTCATCC +
Preference number: 2 (lower is better)
Translates to: HINLSLPNGHRLRKPTVVWDTSY*VSALSS
Trigger: GGATGACAGTGCTGACACCCAGTAGGAAGTATCCCA...CACAACTGTGGGCTTTCTGAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGGATGGTCCTTCCAAGTaGGCCCCATTTAATGCAAGG +
Preference number: 2 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGDGPSK*APFNAR
Trigger: CCTTGCATTAAATGGGGCCCACTTGGAAGGACCATC...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTGCACCCGACATAGGGTaGAGGTCAGACACATTCCCT +
Preference number: 2 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVAPDIG*RSDTFP
Trigger: AGGGAATGTGTCTGACCTCCACCCTATGTCGGGTGC...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGAACCCTTTCCCAAAATaGACTTTTACCAAAGAGGAC +
Preference number: 2 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKNPFPK*TFTKED
Trigger: GTCCTCTTTGGTAAAAGTTCATTTTGGGAAAGGGTT...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATATCTGTACCTTCATTTaGAATGGCTCAGCTAGTTTA +
Preference number: 2 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHICTFI*NGSASL
Trigger: TAAACTAGCTGAGCCATTGCAAATGAAGGTACAGAT...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGCCAGCCCAGCAGTGTTaGCTGATCAACACTGTGAGC +
Preference number: 2 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLRPAQQC*LINTVS
Trigger: GCTCACAGTGTTGATCAGGCAACACTGCTGGGCTGG...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTTGTGTATTGGGGCTGTaGAGGCTGCCACATTCTTGC +
Preference number: 2 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVCVLGL*RLPHSC
Trigger: GCAAGAATGTGGCAGCCTGCACAGCCCCAATACACA...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGGTTTCAATAGCTCCCTaGGGGTCCAAGCCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLVSIAP*GSKPKA
Trigger: AGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAAC...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp GGCCCCAACCCACTCCATACATACAGACTTGAACCCAAAAGCCAGGCCAGCCAGGCACCAGAGGTGAAGTaGTTATTTGCCTTAAAATAT +
Preference number: 2 (lower is better)
Translates to: GPNPLHTYRLEPKSQASQAPEVK*LFALKY
Trigger: ATATTTTAAGGCAAATAATCACTTCACCTCTGGTGC...CTGGCTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGAGTGGGTTGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CATCTGTTCTTCCCAGCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGCAACTCAGATCGTACTaGAGGTGTTGGTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: HLFFPALCGANKYLQPFMQLRSY*RCWCRK
Trigger: CTTCCTGCACCAACACCTTCAGTACGATCTGAGTTG...CATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGCTGGGAAGAACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGGCAATGTGAGGCTTTaGCTGCTGTCGGGGACAAAT +
Preference number: 2 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLGNVRL*LLSGTN
Trigger: ATTTGTCCCCGACAGCAGGCAAAGCCTCACATTGCC...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp GGCGTCTTCATATTCACCTTGGATAACCCTATTCCCTCCAGAACTTTCGTCACCTGGGATACTTCCTACTaGGTGTCAGCACTGTCATCC +
Preference number: 2 (lower is better)
Translates to: GVFIFTLDNPIPSRTFVTWDTSY*VSALSS
Trigger: GGATGACAGTGCTGACACCCAGTAGGAAGTATCCCA...GGTGACGAAAGTTCTGGAGGGAATAGGGTTATCCAAGGTGAATATGAAGACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGTGCTTATGCGACGCATaGAAGGCACCAGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLRCLCDA*KAPEVK
Trigger: CTTCACCTCTGGTGCCTTCCATGCGTCGCATAAGCA...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGTCTCCCTTCAAACCCTaGGTATTTGCCTTCCTCACT +
Preference number: 2 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLSPFKP*VFAFLT
Trigger: AGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGA...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAATGTTTTGTTCAGGCCTaGAGCCTGGAAAAGGCCGCC +
Preference number: 2 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKCFVQA*SLEKAA
Trigger: GGCGGCCTTTTCCAGGCTTCAGGCCTGAACAAAACA...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp GTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACCAAAGCAGGGCCCTATaGAATAGATACACAGTTCAA +
Preference number: 2 (lower is better)
Translates to: VSLQTLSICLPHFCEEGNQSRAL*NRYTVQ
Trigger: TTGAACTGTGTATCTATTTCATAGGGCCCTGCTTTG...GTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561680.5
3UTR-3UTR GCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGCAGAATCTTGAAGCTTaGAAAATCGATTCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKQNLEA*KIDSGK
Trigger: TTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACATGGAAGATGAGGAGTaGGCTGGATCCCAGCACGCA +
Preference number: 2 (lower is better)
Translates to: FICNGSASLLKGFGTRHNMEDEE*AGSQHA
Trigger: TGCGTGCTGGGATCCAGCCCACTCCTCATCTTCCAT...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGCCAAGTAGGTCAATTTaGGGCAAGATTCAAAAACTC +
Preference number: 2 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGPSRSI*GKIQKL
Trigger: GAGTTTTTGAATCTTGCCTCAAATTGACCTACTTGG...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGCATTTAATGCAAGGCTaGGCCTTTGTGGCCCTATTT +
Preference number: 2 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLHLMQG*AFVALF
Trigger: AAATAGGGCCACAAAGGCTCAGCCTTGCATTAAATG...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp GCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGACTGTAATCCCTCTTGGCAACAAGCCCACCTaGATGGTGTTCTTGTTTTCA +
Preference number: 2 (lower is better)
Translates to: ALCGANKYLQPFMTVIPLGNKPT*MVFLFS
Trigger: TGAAAACAAGAACACCATTCAGGTGGGCTTGTTGCC...AAGAGGGATTACAGTCATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTCAAGGACCCATCATCTaGACTTTTCTAGGCAAGTTG +
Preference number: 2 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVQGPII*TFLGKL
Trigger: CAACTTGCCTAGAAAAGTTCAGATGATGGGTCCTTG...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp GCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGACTGTAATCCCTCTTCACTGTGAGCTCAGATaGTGTCCTTTTCTGGGGAAT +
Preference number: 2 (lower is better)
Translates to: ALCGANKYLQPFMTVIPLHCELR*CPFLGN
Trigger: ATTCCCCAGAAAAGGACAGCATCTGAGCTCACAGTG...AAGAGGGATTACAGTCATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACGCCAGAGAATACACTTaGGCTCAGTTCACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: FICNGSASLLKGFGTRHNAREYT*AQFTSP
Trigger: TGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGC...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAAAGTGCACAAAGGTGTTaGAGCTTGGTCTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKSAQRC*SLVSSG
Trigger: GCCTGAGGAGACCAAGCTCCAACACCTTTGTGCACT...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTTTCAGGCAGTTATaGAAAGAAACTCTGACCTGG +
Preference number: 2 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNLFRQL*KETLTW
Trigger: CCAGGTCAGAGTTTCTTTTCATAACTGCCTGAAAAG...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CTAAGGTCGCTCAGCCTTCAAATGCCCCAAACCAAACTGATATTGGTCCCTATTTTTCTTTGTACTGTTTaGGGTGAGCAGTGGCTCCAA +
Preference number: 2 (lower is better)
Translates to: LRSLSLQMPQTKLILVPIFLCTV*GEQWLQ
Trigger: TTGGAGCCACTGCTCACCTCAAACAGTACAAAGAAA...AATAGGGACCAATATCAGTTTGGTTTGGGGCATTTGAAGGCTGAGCGACCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAAGTCCCCATAACAAGATaGCCCCCATATTCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKVPITR*PPYSWR
Trigger: TCTCCAGGAATATGGGGGCCATCTTGTTATGGGGAC...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CCA 90 bp TCACAAGCTAATGGCAGTCCCTGGAGCAGGAAGCAACTTGTTATTCTGCTCAAGAACCCACAGAAAATCTaGCACAGAAAGGGATTAGAC +
Preference number: 2 (lower is better)
Translates to: SQANGSPWSRKQLVILLKNPQKI*HRKGLD
Trigger: GTCTAATCCCTTTCTGTGCCAGATTTTCTGTGGGTT...CTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCATTAGCTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTAGGGGAACAGAATCTTaGAGCTTGCAAAATCGATTC +
Preference number: 2 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLRGTES*SLQNRF
Trigger: GAATCGATTTTGCAAGCTTCAAGATTCTGTTCCCCT...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
3UTR-3UTR TCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTAGCCATCTGACTTaGCTTCCTTGGTTATCAAAT +
Preference number: 2 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNLSHLT*LPWLSN
Trigger: ATTTGATAACCAAGGAAGTCAAGTCAGATGGCTAAG...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR GCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGGCCTTTGTGTATTATaGATCCCAAAGAAAACACGC +
Preference number: 2 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLGLCVL*IPKKTR
Trigger: GCGTGTTTTCTTTGGGATGCATAATACACAAAGGCC...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp TCACAAGCTAATGGCAGTCCCTGGAGCAGGAAGCAACTTGTTATTCTGCTCAAGAAAACTACTGCATCATaGGGACTCACTGAACTCATT +
Preference number: 2 (lower is better)
Translates to: SQANGSPWSRKQLVILLKKTTAS*GLTELI
Trigger: AATGAGTTCAGTGAGTCCCCATGATGCAGTAGTTTT...CTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCATTAGCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATAATAATTACATATTCTaGCCCTTCAGAAGGACACCA +
Preference number: 2 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNNNYIF*PFRRTP
Trigger: TGGTGTCCTTCTGAAGGGTCAGAATATGTAATTATT...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp CTATTCCCTCCAGAACTTTCGTCACCACGTGGTCTATACATGATGACATGTGCACTTAGCCATCTGACTTaGCTTCCTTGGTTATCAAAT +
Preference number: 2 (lower is better)
Translates to: LFPPELSSPRGLYMMTCALSHLT*LPWLSN
Trigger: ATTTGATAACCAAGGAAGTCAAGTCAGATGGCTAAG...TGCACATGTCATCATGTATAGACCACGTGGTGACGAAAGTTCTGGAGGGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTAATCACATGGAAATCTaGCAGGACAAGGGAAAGAAA +
Preference number: 2 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLNHMEI*QDKGKK
Trigger: TTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATT...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR TCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACTTCCAATTCCATGATTaGCAAGAGTGCTTATGCGAC +
Preference number: 2 (lower is better)
Translates to: FICNGSASLLKGFGTRHNFQFHD*QECLCD
Trigger: GTCGCATAAGCACTCTTGTCAATCATGGAATTGGAA...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR TCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAACCCTCTTTCACCAGATaGTCAAGTGGTTTTACTGAA +
Preference number: 2 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKPSFTR*SSGFTE
Trigger: TTCAGTAAAACCACTTGATCATCTGGTGAAAGAGGG...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR GCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAAGGCCTTTGTGTATTATaGATCCCAAAGAAAACACGC +
Preference number: 2 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKGLCVL*IPKKTR
Trigger: GCGTGTTTTCTTTGGGATGCATAATACACAAAGGCC...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CCA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCATCTTCATATTCACCTTaGATAACCCTATTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSSSYSP*ITLFPP
Trigger: TGGAGGGAATAGGGTTATCCAAGGTGAATATGAAGA...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 90 bp AAACTAAGGTCGCTCAGCCTTCAAATGCCCCAAACCAAACTGATATaGGTCCCTATTGAAACTATTAAACGCAAAAACGCTTCCTTCAAT +
Preference number: 2 (lower is better)
Translates to: KLRSLSLQMPQTKLI*VPIETIKRKNASFN
Trigger: ATTGAAGGAAGCGTTTTTGCGTTTAATAGTTTCAATAGGGACCAATATCAGTTTGGTTTGGGGCATTTGAAGGCTGAGCGACCTTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 90 bp GACCCACTCCGCTTCAAGCTAAAGAGTGTACAAAATGCCACTCACTaGCATGAAGAAGAATTAAACAGAACATTCACTTTCGGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: DPLRFKLKSVQNATH*HEEELNRTFTFGRK
Trigger: TTTTCTTCCGAAAGTGAATGTTCTGTTTAATTCTTCTTCATGCAAGTGAGTGGCATTTTGTACACTCTTTAGCTTGAAGCGGAGTGGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 90 bp AGATGCAAATTAACTCCTAAGTCACTCTCTGGCGTGTCATCCTTTTaGGTCATTCATCTGCATTTAGTTTCAGTGACTTCAGAACTATTT +
Preference number: 2 (lower is better)
Translates to: RCKLTPKSLSGVSSF*VIHLHLVSVTSELF
Trigger: AAATAGTTCTGAAGTCACTGAAACTAAATGCAGATGAATGACCAAAAAGGATGACACGCCAGAGAGTGACTTAGGAGTTAATTTGCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 72 bp GGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTaGCCTCACATCTGCCAGCCCTCAGGCCGGCCAGGT +
Preference number: 3 (lower is better)
Translates to: GLGQPTSPSQVS*PHICQPSGRPG
Trigger: ACCTGGCCGGCCTGAGGGCTGGCAGATGTGAGGGCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR GCA 72 bp GCTTCCCACTCTGCAGTGGCAGGAAGGCCATGCCTCTaGAGGACGCTCGCACTGATTCTGGAAGGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: ASHSAVAGRPCL*RTLALILEGAQ
Trigger: CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGCAGAGTGGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp GCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTCAAGGGAAAGAAAACTaGACTGAGAGACAGGCACGA +
Preference number: 3 (lower is better)
Translates to: APNAEERGPPNSTADPPTQGKEN*TERQAR
Trigger: TCGTGCCTGTCTCTCAGTCAAGTTTTCTTTCCCTTG...AGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
3UTR TCA 72 bp CCAGCTTCAGAGTCACCTGCTGGACCCACATGTTCCTaGGCCAGATGCCAGGAGCTCACCCACAGGACGGGA +
Preference number: 3 (lower is better)
Translates to: PASESPAGPTCS*ARCQELTHRTG
Trigger: TCCCGTCCTGTGGGTGAGCTCCTGGCATCTGGCTCAGGAACATGTGGGTCCAGCAGGTGACTCTGAAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp CTGCTTCCTCCCTTATCTCCCAGACCTGGCCGTGTGTaGACCTCACCAGCCTACCAAGCTGTTGGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: LLPPLSPRPGRV*TSPAYQAVGPG
Trigger: TCCAGGCCCAACAGCTTGGTAGGCTGGTGAGGTCCACACACGGCCAGGTCTGGGAGATAAGGGAGGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp AACAGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTACAGAGTGAAAGAGTaGGGAACAGGCAGCCCCCTT +
Preference number: 3 (lower is better)
Translates to: NRQPPLGLGQPTSPSQVSYRVKE*GTGSPL
Trigger: AAGGGGGCTGCCTGTTCCCAACTCTTTCACTCTGTA...GGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR TCA 72 bp TGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTaGTTCTGGAAGGGGCCCAGGCCAGAGAATACACTT +
Preference number: 3 (lower is better)
Translates to: WQEGHASAGRSH*FWKGPRPENTL
Trigger: AAGTGTATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR GCA 72 bp GTGCTGATAGCAGACAGGTGGGGTGTTCCAGGCCACTaGTTCCTCCCTTATCTCCCAGACCTGGCCGTGTGT +
Preference number: 3 (lower is better)
Translates to: VLIADRWGVPGH*FLPYLPDLAVC
Trigger: ACACACGGCCAGGTCTGGGAGATAAGGGAGGAAGCAGTGGCCTGGAACACCCCACCTGTCTGCTATCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp CCAGAGCATCCACAACGAACCAATCTGAGATCCGAGTaGAAGATGAGAGCCCCGGAGCTGGCTGAGGTCCCC +
Preference number: 3 (lower is better)
Translates to: PEHPQRTNLRSE*KMRAPELAEVP
Trigger: GGGGACCTCAGCCAGCTCCGGGGCTCTCATCTTCCACTCGGATCTCAGATTGGTTCGTTGTGGATGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR CCA 72 bp TCCCAGCACGCAGACTCAACACTGACTTGGAGCAGGTaGTGCCTAAGGCTGCCTGAGAACCACTGCCGACTG +
Preference number: 3 (lower is better)
Translates to: SQHADSTLTWSR*CLRLPENHCRL
Trigger: CAGTCGGCAGTGGTTCTCAGGCAGCCTTAGGCACCACCTGCTCCAAGTCAGTGTTGAGTCTGCGTGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp TGGGCTGGATCCCAGCACGCAGACTCAACACTGACTTaGAGCAGGTGGTGCCTAAGGCTGCCTGAGAACCAC +
Preference number: 3 (lower is better)
Translates to: WAGSQHADSTLT*SRWCLRLPENH
Trigger: GTGGTTCTCAGGCAGCCTTAGGCACCACCTGCTCCAAGTCAGTGTTGAGTCTGCGTGCTGGGATCCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp GCCCCTGAGGCAGACGTGGTGCTCAGCCACATAGCCTaGGACACTGCTCCCAACTCAGATCGTACTGAAGGT +
Preference number: 3 (lower is better)
Translates to: APEADVVLSHIA*DTAPNSDRTEG
Trigger: ACCTTCAGTACGATCTGAGTTGGGAGCAGTGTCCCAGGCTATGTGGCTGAGCACCACGTCTGCCTCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 72 bp TGGGCCGGACTTGCCCATGCTGGCTTCAGCTCACATTaGCAAGGAAGATGTGTATTGGGGCTGTGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: WAGLAHAGFSSH*QGRCVLGLCRL
Trigger: CAGCCTGCACAGCCCCAATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp CTGATTCTGGAAGGGGCCCAGGCCAGAGAATACACTTaGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: LILEGAQAREYT*AQFTSPNHRGR
Trigger: CCTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGGGCCCCTTCCAGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCGAGGGGAACAGAATCTaGAAGCTTGCAAAATCGATT +
Preference number: 3 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCEGNRI*KLAKSI
Trigger: AATCGATTTTGCAAGCTTCAAGATTCTGTTCCCCTC...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATAAATGGGCAAGTGCTTaGGCTGGTGGAGTAGGCTTG +
Preference number: 3 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHKWASA*AGGVGL
Trigger: CAAGCCTACTCCACCAGCCAAAGCACTTGCCCATTT...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 72 bp AACACTGACTTGGAGCAGGTGGTGCCTAAGGCTGCCTaGGAACCACTGCCGACTGACCGTTCCAATGCTGTC +
Preference number: 3 (lower is better)
Translates to: NTDLEQVVPKAA*EPLPTDRSNAV
Trigger: GACAGCATTGGAACGGTCAGTCGGCAGTGGTTCTCAGGCAGCCTTAGGCACCACCTGCTCCAAGTCAGTGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp GCCAAGCGCTCAGAGCTGGGCCGGACTTGCCCATGCTaGCTTCAGCTCACATTGCCAAGGAAGATGTGTATT +
Preference number: 3 (lower is better)
Translates to: AKRSELGRTCPC*LQLTLPRKMCI
Trigger: AATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTCTGAGCGCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 72 bp CAGGCCGGCCAGGTCTCCCTTCAAACCCTGAGTATTTaGCTTCCTCACTTCTGCGAAGAGGGGAACAGAATC +
Preference number: 3 (lower is better)
Translates to: QAGQVSLQTLSI*LPHFCEEGNRI
Trigger: GATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGGCCGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
3UTR-3UTR CAA 90 bp GCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGACTGTAATCCCTCTTAACAGGCAGCCCCCTTaGGGCCTGGGTCAGCCTACG +
Preference number: 3 (lower is better)
Translates to: ALCGANKYLQPFMTVIPLNRQPP*GLGQPT
Trigger: CGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGTT...AAGAGGGATTACAGTCATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp TACAAGAAAAGGTACGCCTGGGCCACACGCAGGACATaGCACCCACTAGGGTTGTTCAGGTCTCATTCACTG +
Preference number: 3 (lower is better)
Translates to: YKKRYAWATRRT*HPLGLFRSHSL
Trigger: CAGTGAATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTACCTTTTCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGTCAAACCCTGAGTATTaGCCTTCCTCACTTCTGCGA +
Preference number: 3 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKSNPEY*PSSLLR
Trigger: TCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR GCA 72 bp CCAGCAGTGTTGCCTGATCAACACTGTGAGCTCAGATaGTGTCCTTTTCTGGGGAATGAGACGCCACATGTC +
Preference number: 3 (lower is better)
Translates to: PAVLPDQHCELR*CPFLGNETPHV
Trigger: GACATGTGGCGTCTCATTCCCCAGAAAAGGACAGCATCTGAGCTCACAGTGTTGATCAGGCAACACTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTGGGCAATGTGAGGCTTaGCCTGCTGTCGGGGACAAA +
Preference number: 3 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVGQCEA*PAVGDK
Trigger: TTTGTCCCCGACAGCAGGCAAAGCCTCACATTGCCC...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATAAAGGTCACCCTTCCTaGAGTCAGAGGTCCCTGGGA +
Preference number: 3 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNKGHPS*SQRSLG
Trigger: TCCCAGGGACCTCTGACTCAAGGAAGGGTGACCTTT...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATGAGATAAGCCCAATTTaGACTTTGCAAACACACTCA +
Preference number: 3 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHEISPI*TLQTHS
Trigger: TGAGTGTGTTTGCAAAGTCAAAATTGGGCTTATCTC...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 72 bp TGTTGGAGCTTGGTCTCCTCAGGCTTAACCCAAGGCTaGCTCACTAGGACAGCTTCCAAGAACCACAGATGT +
Preference number: 3 (lower is better)
Translates to: CWSLVSSGLTQG*LTRTASKNHRC
Trigger: ACATCTGTGGTTCTTGGAAGCTGTCCTAGTGAGTCAGCCTTGGGTTAAGCCTGAGGAGACCAAGCTCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 72 bp TCTCAGAGCACATGGATAGGTGACGGGTTTCTCATGTaGATCTACAAGAAAAGGTACGCCTGGGCCACACGC +
Preference number: 3 (lower is better)
Translates to: SQSTWIGDGFLM*IYKKRYAWATR
Trigger: GCGTGTGGCCCAGGCGTACCTTTTCTTGTAGATTCACATGAGAAACCCGTCACCTATCCATGTGCTCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 72 bp ATGGCAGTCCCTGGAGCAGGAAGCAACTTGTTATTCTaGTCAAGAGAATCCACCAGCAGCTCTTGGCCTAGA +
Preference number: 3 (lower is better)
Translates to: MAVPGAGSNLLF*SRESTSSSWPR
Trigger: TCTAGGCCAAGAGCTGCTGGTGGATTCTCTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp GCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTaGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTT +
Preference number: 3 (lower is better)
Translates to: AKGAGEEYVSVS*CHLAPHSKQPV
Trigger: AACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATAACCATTATCAGAATCTaGTTTCACACCATCTCTCTT +
Preference number: 3 (lower is better)
Translates to: MPLQDARTDSGRGPGQRITIIRI*FHTISL
Trigger: AAGAGAGATGGTGTGAAACAAGATTCTGATAATGGT...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATAGCAAACAGCCTGTTTaGTTCAGGCCTGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNSKQPV*FRPEAW
Trigger: CCAGGCTTCAGGCCTGAACAAAACAGGCTGTTTGCT...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGCACATAAACCTAAGTTaGCCCAACGGGCATCGCCTC +
Preference number: 3 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLHINLS*PNGHRL
Trigger: GAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp TCACAAGCTAATGGCAGTCCCTGGAGCAGGAAGCAACTTGTTATTCTGCTCAAGAGACTCAACACTGACTaGGAGCAGGTGGTGCCTAAG +
Preference number: 3 (lower is better)
Translates to: SQANGSPWSRKQLVILLKRLNTD*EQVVPK
Trigger: CTTAGGCACCACCTGCTCCAAGTCAGTGTTGAGTCT...CTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCATTAGCTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATATCGTACTGAAGGTGTaGGTGCAGGAAGCTAACCCC +
Preference number: 3 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNIVLKV*VQEANP
Trigger: GGGGTTAGCTTCCTGCACCAACACCTTCAGTACGAT...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp GAGATTTCTGATAAAGCTCAGGATGGTCCTTCCAAGTaGGCCCCATTTAATGCAAGGCTGAGCCTTTGTGGC +
Preference number: 3 (lower is better)
Translates to: EISDKAQDGPSK*APFNARLSLCG
Trigger: GCCACAAAGGCTCAGCCTTGCATTAAATGGGGCCCACTTGGAAGGACCATCCTGAGCTTTATCAGAAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp CATCTCCTAGGTGCTAAGACCAACCCACAGAAAATCTaGCACAGAAAGGGATTAGACCTCAGTCCACCTCTC +
Preference number: 3 (lower is better)
Translates to: HLLGAKTNPQKI*HRKGLDLSPPL
Trigger: GAGAGGTGGACTGAGGTCTAATCCCTTTCTGTGCCAGATTTTCTGTGGGTTGGTCTTAGCACCTAGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGACCATTATCAGAATCTaGTTTCACACCATCTCTCTT +
Preference number: 3 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKTIIRI*FHTISL
Trigger: AAGAGAGATGGTGTGAAACAAGATTCTGATAATGGT...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR TCA 72 bp CAGGTCTCATTCACTGCAAGCAAGAATTCACGTACATaGGTGCACAAAGGTGTTGGAGCTTGGTCTCCTCAG +
Preference number: 3 (lower is better)
Translates to: QVSFTASKNSRT*VHKGVGAWSPQ
Trigger: CTGAGGAGACCAAGCTCCAACACCTTTGTGCACTCATGTACGTGAATTCTTGCTTGCAGTGAATGAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp AGGCGCCCAAAGCGACAATTAGTGCCTTCTGAAACATaGGTGGAAGGGTGTGTTCTGGTGCAAATTCAAGTA +
Preference number: 3 (lower is better)
Translates to: RRPKRQLVPSET*VEGCVLVQIQV
Trigger: TACTTGAATTTGCACCAGAACACACCCTTCCACCCATGTTTCAGAAGGCACTAATTGTCGCTTTGGGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp CATCTGTTCTTCCCAGCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGAAGGCTCCCTGGCCTTaGTGTATTATGCATCCCAAA +
Preference number: 3 (lower is better)
Translates to: HLFFPALCGANKYLQPFMKAPWP*CIMHPK
Trigger: TTTGGGATGCATAATACACAAAGGCCAGGGAGCCTT...CATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGCTGGGAAGAACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGGTTTACTCAAGGGTTTaGGGACCAGACATAACTCAC +
Preference number: 3 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLVYSRV*GPDITH
Trigger: GTGAGTTATGTCTGGTCCCAAAACCCTTGAGTAAAC...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR-3UTR CAA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTCAAGGGAAAGAAAACTaGACTGAGAGACAGGCACGA +
Preference number: 3 (lower is better)
Translates to: LSICLPHFCEEGNRILKLQGKEN*TERQAR
Trigger: TCGTGCCTGTCTCTCAGTCAAGTTTTCTTTCCCTTG...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 72 bp CCTCTTTCACCAGATGATCAAGTGGTTTTACTGAAGTaGGCTGGGAAAACTTGGGCAACAAGCCCACCTGAA +
Preference number: 3 (lower is better)
Translates to: PLSPDDQVVLLK*AGKTWATSPPE
Trigger: TTCAGGTGGGCTTGTTGCCCAAGTTTTCCCAGCTCACTTCAGTAAAACCACTTGATCATCTGGTGAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 72 bp TTTAGTTTCAGTGACTTCAGAACTATTTCTTGCAGCTaGCAACATATCCTCAGGAGGCCAACCACCTGCCCC +
Preference number: 3 (lower is better)
Translates to: FSFSDFRTISCS*QHILRRPTTCP
Trigger: GGGGCAGGTGGTTGGCCTCCTGAGGATATGTTGTCAGCTGCAAGAAATAGTTCTGAAGTCACTGAAACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGGCTGGTGGAGTAGGCTaGTTTCTTTCATGGCTTTTA +
Preference number: 3 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLRAGGVG*FLSWLL
Trigger: TAAAAGCCATGAAAGAAACAAGCCTACTCCACCAGC...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 72 bp TTGCATCCATCTAAAACCACCAGAGGTTCCACCAAATaGTTGAGGGTTTCAGCTGTACAGTGTCCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: LHPSKTTRGSTK*LRVSAVQCPGK
Trigger: TTTTCCTGGACACTGTACAGCTGAAACCCTCAAGCATTTGGTGGAACCTCTGGTGGTTTTAGATGGATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR-3UTR CAA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCATCCATACATACAGACTaGAACCCAAAAGCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSSIHTD*NPKARP
Trigger: TGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGA...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 72 bp GAAGTGAGCTGGGAAAACTTGGGCAACAAGCCCACCTaGATGGTGTTCTTGTTTTCAATCTCACTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: EVSWENLGNKPT*MVFLFSISLQR
Trigger: TCTTTGAAGTGAGATTGAAAACAAGAACACCATTCAGGTGGGCTTGTTGCCCAAGTTTTCCCAGCTCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 72 bp ACTTTCGTCACCACGTGGTCTATACATGATGACATGTaGAACCACACATTACATCAACTAGAAAGCGTCCAT +
Preference number: 3 (lower is better)
Translates to: TFVTTWSIHDDM*NHTLHQLESVH
Trigger: ATGGACGCTTTCTAGTTGATGTAATGTGTGGTTGCACATGTCATCATGTATAGACCACGTGGTGACGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CCA 72 bp TTGTTATTCTGCTCAAGAGAATCCACCAGCAGCTCTTaGCCTAGAAACTTTTTCCCCTTTCTGATACCTGTT +
Preference number: 3 (lower is better)
Translates to: LLFCSRESTSSS*PRNFFPFLIPV
Trigger: AACAGGTATCAGAAAGGGGAAAAAGTTTCTAGGCCAAGAGCTGCTGGTGGATTCTCTTGAGCAGAATAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR TCA 72 bp GTTTGTAAAATATGGAACCACTTTCTTTGTACTGTTTaGGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTT +
Preference number: 3 (lower is better)
Translates to: VCKIWNHFLCTV*GEQWLQTEQVV
Trigger: AACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAAAGTGGTTCCATATTTTACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR TCA 72 bp CCCTCGGATGGCTGTTTACTTCAAATCAAACTTCTCTaGCGAGATTTTAATCTGAAACTGCATCTGTTCTTC +
Preference number: 3 (lower is better)
Translates to: PSDGCLLQIKLL*RDFNLKLHLFF
Trigger: GAAGAACAGATGCAGTTTCAGATTAAAATCTCGTCAGAGAAGTTTGATTTGAAGTAAACAGCCATCCGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR GCA 72 bp TACAATTTTATGTTTCAATCCATCTGTACCTTCATTTaGAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGG +
Preference number: 3 (lower is better)
Translates to: YNFMFQSICTFI*NGSASLLKGFG
Trigger: CCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAAGGTACAGATGGATTGAAACATAAAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR TCA 72 bp ATCCTAAGGCAACTCAGACGTGATAGTTTTAGACTATaGTCAAATCTCACACAAACCATTATCAGAATCTTG +
Preference number: 3 (lower is better)
Translates to: ILRQLRRDSFRL*SNLTQTIIRIL
Trigger: CAAGATTCTGATAATGGTTTGTGTGAGATTTGATCATAGTCTAAAACTATCACGTCTGAGTTGCCTTAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR TCA 72 bp TTAAATTACTTTCTCAACCAGACAGTTCTTGTGACTTaGATGATATCTGCTGAGAAGAGAAGAAACACAAGA +
Preference number: 3 (lower is better)
Translates to: LNYFLNQTVLVT*MISAEKRRNTR
Trigger: TCTTGTGTTTCTTCTCTTCTCAGCAGATATCATTCAAGTCACAAGAACTGTCTGGTTGAGAAAGTAATTTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp ACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCAGGGCCCGAAGGGCTaGGGGTGCCGCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TWASQLHRGPAHWATRETQGPKG*GCRWLP
Trigger: GGGAAGCCAGCGGCACCCCCAGCCCTTCGGGCCCTG...GGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCGGCTCGGTGGTGGGCTaGTACGGGCTGCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRGSVVG*YGLLAP
Trigger: GGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCC...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp GCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGCTCGGTGGTGGGCTaGTACGGGCTGCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: APNAEERGPPNSTADPPTGSVVG*YGLLAP
Trigger: GGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCC...AGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCAGCACACCCAGCTGTaGGCTGGCCTGGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRQHTQL*AGLAAL
Trigger: GAGGGCAGCCAGGCCAGCTCACAGCTGGGTGTGCTG...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGTGGGCTGGTGCTGGCTaGCTGGGGGCCCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: AAPQPQTLRNVGLPTPPRWAGAG*LGALAW
Trigger: CCATGCCAGGGCCCCCAGGCAGCCAGCACCAGCCCA...CCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp ACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCTGGCGCCCGAGATCATaGAGGTGCTCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: TWASQLHRGPAHWATRETWRPRS*RCSRPR
Trigger: GCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCA...GGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp GGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTGCTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGG +
Preference number: 4 (lower is better)
Translates to: GPPNSTADPPTGPLGKPFAGTGC*RPRSWR
Trigger: CCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGC...AAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp ACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCACGTGTCCAGGCGCTaGATCTCAGGGCGACTGTCC +
Preference number: 4 (lower is better)
Translates to: TWASQLHRGPAHWATRETHVSRR*ISGRLS
Trigger: GGACAGTCGCCCTGAGATCCAGCGCCTGGACACGTG...GGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp GGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCACAGCCCCAAACGCTaGGGAACGTGGGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GPPNSTADPPTGPLGKPFHSPKR*GTWASQ
Trigger: TTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTG...AAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp GCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGGCTGCCCACAGGCGTaGGCCTTCCTGCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGRPCLCRTLALILEGAQGCPQA*AFLPGD
Trigger: GTCCCCTGGCAGGAAGGCTCACGCCTGTGGGCAGCC...CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGGCTCGGTGGTGGGCTaGTACGGGCTGCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: AVAGRPCLCRTLALILEGGSVVG*YGLLAP
Trigger: GGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCC...CCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCTCACTTGGGCGACCTTaGGGCGGCCGAGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPSLGRP*GGRARR
Trigger: GCGGCGCGCTCGGCCGCCTCAAGGTCGCCCAAGTGA...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AACAGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCAGCCCCGGAGCTGGCTaGGGTCCCCCAGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: NRQPPLGLGQPTSPSQVSSPGAG*GPPGSF
Trigger: GAAGCTTCCTGGGGGACCTCAGCCAGCTCCGGGGCT...GGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGACACACTCAACAGACCTaGCAGGCAGCACACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RNVGLPTPPRTRPLGHSGHTQQT*QAAHPA
Trigger: AGCTGGGTGTGCTGCCTGTCAGGTCTGTTGAGTGTG...TCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp AGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAGGAAGCTTCCCACTCTaGAGTGGCAGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: RNVGLPTPPRTRPLGHSGGSFPL*SGRKAM
Trigger: CATGGCCTTCCTGCCACTGCAGAGTGGGAAGCTTCC...TCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACAGATCGGCTCGGTGGTaGGCTGGTACGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSTAPNAEERGPPNSTADRSARW*AGTGCW
Trigger: CCAGCAGCCCGTACCAGCCCACCACCGAGCCGATCT...GTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563952.1
CDS-3UTR TCA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATTCACTTGGGCGACCTTaGGGCGGCCGAGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHSLGRP*GGRARR
Trigger: GCGGCGCGCTCGGCCGCCTCAAGGTCGCCCAAGTGA...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTTCTGCTGGCGGACGCTaGCTCTCCATTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GPPNSTADPPTGPLGKPFSAGGR*LSISAL
Trigger: CAGTGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGA...AAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp GCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCAGGACGCTCGCACTaGTTCTGGAAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGRPCLCRTLALILEGAQAGRSH*FWKGPR
Trigger: CCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGC...CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp TGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGAGATCATGGAGGTaGTCGAGGCCTCGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: CSTAPNAEERGPPNSTADPRSWR*SRPRPR
Trigger: TCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGG...GTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCTCGGATGTAGTCATTaGTGCTCTGCTGGCGGACGC +
Preference number: 4 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRLGCSH*CSAGGR
Trigger: GCGTCCGCCAGCAGAGCACCAATGACTACATCCGAG...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp GCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGGTCAGACACATTCCCTaGCTGCCCACAGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: AAPQPQTLRNVGLPTPPRVRHIP*LPTGVS
Trigger: GCTCACGCCTGTGGGCAGCCAGGGAATGTGTCTGAC...CCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GCAGTGACGCCGGCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAAGCCTACCAAGCTGTTaGGCCTGGACGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AVTPAAPQPQTLRNVGLPSLPSC*AWTWVL
Trigger: CAGCACCCACGTCCAGGCCCAACAGCTTGGTAGGCT...TGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGCCGGCGTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GCAGTGACGCCGGCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAAGGAGGCCAACCACCTaGCCCCCTCTTTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: AVTPAAPQPQTLRNVGLPRRPTT*PPLSPD
Trigger: ATCTGGTGAAAGAGGGGGGCAGGTGGTTGGCCTCCT...TGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGCCGGCGTCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGAGACCTGGCCGTGTGTaGACCTCACCAGCCTACCAA +
Preference number: 4 (lower is better)
Translates to: AAPQPQTLRNVGLPTPPRRPGRV*TSPAYQ
Trigger: TTGGTAGGCTGGTGAGGTCCACACACGGCCAGGTCT...CCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCCTGTGTTCACTGCATATaGCGCAGTCGCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ASQLHRGPAHWATRETLSCVHCI*RSRQEA
Trigger: GGCTTCTTGGCGACTGCGGCATATGCAGTGAACACA...GGAAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR GCA 90 bp TGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCATCCCTGGACTCCGTaGGGGCTCGGATGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: CSTAPNAEERGPPNSTADHPWTP*GLGCSH
Trigger: ATGACTACATCCGAGCCCGCACGGAGTCCAGGGATG...GTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp GGCCCCAACCCACTCCATACATACAGACTTGAACCCAAAAGCCAGGCCAGCCAGGGCTCACCGGCTCGGTaGTGGGCTGGTACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPNPLHTYRLEPKSQASQGSPAR*WAGTGC
Trigger: GCAGCCCGTACCAGCCCACCACCGAGCCGGTGAGCC...CTGGCTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGAGTGGGTTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACGAAAGAAAACTTGACTaGGAGACAGGCACGAGGACG +
Preference number: 4 (lower is better)
Translates to: NVGLPTPPRTRPLGHSGNERKLD*ETGTRT
Trigger: CGTCCTCGTGCCTGTCTCTCAGTCAAGTTTTCTTTC...GTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp AACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCACATGTCCATAAGGTaGCGCTTTCTTGCACAGACC +
Preference number: 4 (lower is better)
Translates to: NVGLPTPPRTRPLGHSGNHMSIR*RFLAQT
Trigger: GGTCTGTGCAAGAAAGCGTCACCTTATGGACATGTG...GTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCCTTCACACGGGGAGCATaGCATGATGGTCTCTATGCA +
Preference number: 4 (lower is better)
Translates to: ASQLHRGPAHWATRETLSFTRGA*HDGLYA
Trigger: TGCATAGAGACCATCATGGCATGCTCCCCGTGTGAA...GGAAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR GCA 90 bp GGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCAGGAATGTGTTCACTaGATATGCCGCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: GPPNSTADPPTGPLGKPFQECVH*ICRSRQ
Trigger: TTGGCGACTGCGGCATATGCAGTGAACACATTCCTG...AAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR GCA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCCCAGCCCAGCAGTGTTaGCTGATCAACACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCPAQQC*LINTVS
Trigger: GCTCACAGTGTTGATCAGGCAACACTGCTGGGCTGG...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATATGGCGCCCGAGATCATaGAGGTGCTCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRIWRPRS*RCSRPR
Trigger: GCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCA...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGCGCGGACCCGCCCACTaGGCCACTCGGGAAACCCTT +
Preference number: 4 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKRGPAH*ATRETL
Trigger: AAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCG...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGGCAGGACGCTCGCACTaGTTCTGGAAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRAGRSH*FWKGPR
Trigger: CCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGC...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATAGATCCGAGTGGAAGATaGGAGCCCCGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRIDPSGR*EPRSWL
Trigger: CAGCCAGCTCCGGGGCTCTCATCTTCCACTCGGATC...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCGTGGTTTTACTGAAGTaGGCTGGGAAAACTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRVVLLK*AGKTWA
Trigger: TGCCCAAGTTTTCCCAGCTCACTTCAGTAAAACCAC...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCTGTGTTCACTGCATATaGCGCAGTCGCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCCVHCI*RSRQEA
Trigger: GGCTTCTTGGCGACTGCGGCATATGCAGTGAACACA...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGCCTCACCCTGGTaGAAGGGCACCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGQASPW*KGTSRS
Trigger: AGACCTGCTGGTGCCCTTGCACCAGGGTGAGGCCTG...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp AGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAGAGGTTCCACCAAATaGTTGAGGGTTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: RNVGLPTPPRTRPLGHSGRGSTK*LRVSAV
Trigger: TACAGCTGAAACCCTCAAGCATTTGGTGGAACCTCT...TCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGCTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGG +
Preference number: 4 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKAGTGC*RPRSWR
Trigger: CCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGC...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GCAGTGACGCCGGCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAAGATTCCAGTTGATCTaGGGGATCCTCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AVTPAAPQPQTLRNVGLPRFQLI*GILMCR
Trigger: CCTGCACATGAGGATCCCCCAGATCAACTGGAATCT...TGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGCCGGCGTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp CAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGAGTCAGGCCTCACCCTaGTGCAAGGGCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGKEPDTGLSPFYTQRQESQASP*CKGTSR
Trigger: CCTGCTGGTGCCCTTGCACCAGGGTGAGGCCTGACT...CTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATACTGGGGGCCCTGGCATaGAAGATGAGGAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRILGALA*KMRSGL
Trigger: CAGCCCACTCCTCATCTTCCATGCCAGGGCCCCCAG...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTCTTCCCAGCTTTATGTaGGGCCAACAAGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: APNAEERGPPNSTADPPTLPSFM*GQQVSP
Trigger: TGGAGATACTTGTTGGCCCCACATAAAGCTGGGAAG...AGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATACCCTGGCATGGAAGATaGGGAGTGGGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRIPWHGR*GVGWIP
Trigger: TGGGATCCAGCCCACTCCTCATCTTCCATGCCAGGG...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCCCATTTAATGCAAGGCTaGGCCTTTGTGGCCCTATTT +
Preference number: 4 (lower is better)
Translates to: ASQLHRGPAHWATRETLSHLMQG*AFVALF
Trigger: AAATAGGGCCACAAAGGCTCAGCCTTGCATTAAATG...GGAAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp ACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCGACGGGTTTCTCATGTaGATCTACAAGAAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: TWASQLHRGPAHWATRETDGFLM*IYKKRY
Trigger: GTACCTTTTCTTGTAGATTCACATGAGAAACCCGTC...GGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGTCTCCATTTCTGCACTaGCAGGAATGTGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: AAPQPQTLRNVGLPTPPRSPFLH*QECVHC
Trigger: GCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGA...CCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR GCA 90 bp CAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGGTGGCAGGAAGGCCATaGCTCTGCAGGACGCTCGCA +
Preference number: 4 (lower is better)
Translates to: QAREYTWAQFTSPNHRGRVAGRP*LCRTLA
Trigger: TGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCAC...CCTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp GCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCCGTTCAGGTGTCTCCATaGTCTATTCATCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: ASQLHRGPAHWATRETLSVQVSP*SIHLLG
Trigger: ACCTAGGAGATGAATAGAGCATGGAGACACCTGAAC...GGAAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATAAGCCCCCTTTGGGCCTaGGTCAGCCTACGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRISPLWA*VSLRVH
Trigger: ATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCT...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGTGCTTATGCGACGCATaGAAGGCACCAGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGRPCLCRTLALILEGAQCLCDA*KAPEVK
Trigger: CTTCACCTCTGGTGCCTTCCATGCGTCGCATAAGCA...CTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCTGGCCCCCATATTCCTaGAGAAGAATCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCWPPYS*RRIWGS
Trigger: TGAACCCCAGATTCTTCTCCAGGAATATGGGGGCCA...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp TGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACTGGGGGATCCTCATGTaGAGGTTGAGACTGAACATA +
Preference number: 4 (lower is better)
Translates to: CSTAPNAEERGPPNSTADWGILM*RLRLNI
Trigger: TATGTTCAGTCTCAACCTGCACATGAGGATCCCCCA...GTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR GCA 90 bp CTCAGAGTCAAAGGAAGCCTGTGCTTCAGGGCAGGTAAGACCTCAAGTGGACCTTCCTGCCCTCACATCTaGCAGCCCTCAGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LRVKGSLCFRAGKTSSGPSCPHI*QPSGRP
Trigger: TGGCCGGCCTGAGGGCTGGCAGATGTGAGGGCAGGA...AGGTCCACTTGAGGTCTTACCTGCCCTGAAGCACAGGCTTCCTTTGACTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGTCCTGCCCTCACATCTaGCAGCCCTCAGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGSCPHI*QPSGRP
Trigger: TGGCCGGCCTGAGGGCTGGCAGATGTGAGGGCAGGA...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp CCGAGCCTAGCCAGAGCATCCACAACGAACCAATCTGAGATCCGAGTGGAAGATGGCAGTGACGCCGGCTaGTCCACAGCCCCAAACGCT +
Preference number: 4 (lower is better)
Translates to: PSLARASTTNQSEIRVEDGSDAG*STAPNA
Trigger: AGCGTTTGGGGCTGTGGAGCAGCCGGCGTCACTGCC...ATCTTCCACTCGGATCTCAGATTGGTTCGTTGTGGATGCTCTGGCTAGGCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTGAGGACATCAGTGTTTaGATCCATCTAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: GPPNSTADPPTGPLGKPFEDISV*IHLKPP
Trigger: TGGTGGTTTTAGATGGATGCAAACACTGATGTCCTC...AAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTAGCAACTTGTTATTCTaGTCAAGAGAATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GPPNSTADPPTGPLGKPFSNLLF*SRESTS
Trigger: GCTGGTGGATTCTCTTGAGCAGAATAACAAGTTGCT...AAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAGGCTCACCGGCTCGGTaGTGGGCTGGTACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLQTLSICLPHFCEEGNRGSPAR*WAGTGC
Trigger: GCAGCCCGTACCAGCCCACCACCGAGCCGGTGAGCC...TCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GGCGTCTTCATATTCACCTTGGATAACCCTATTCCCTCCAGAACTTTCGTCACCGGCTGGGGGTGCCGCTaGCTTCCCAGGGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GVFIFTLDNPIPSRTFVTGWGCR*LPRAKR
Trigger: GCGCTTGGCCCTGGGAAGCCAGCGGCACCCCCAGCC...GGTGACGAAAGTTCTGGAGGGAATAGGGTTATCCAAGGTGAATATGAAGACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCAACCCACAGAAAATCTaGCACAGAAAGGGATTAGAC +
Preference number: 4 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRNPQKI*HRKGLD
Trigger: GTCTAATCCCTTTCTGTGCCAGATTTTCTGTGGGTT...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCCAAGGACCCATCATCTaGACTTTTCTAGGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCQGPII*TFLGKL
Trigger: CAACTTGCCTAGAAAAGTTCAGATGATGGGTCCTTG...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCCAAGTAGGTCAATTTaGGGCAAGATTCAAAAACTC +
Preference number: 4 (lower is better)
Translates to: GPPNSTADPPTGPLGKPFPSRSI*GKIQKL
Trigger: GAGTTTTTGAATCTTGCCTCAAATTGACCTACTTGG...AAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATAGCCCCGGAGCTGGCTaGGGTCCCCCAGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHSPGAG*GPPGSF
Trigger: GAAGCTTCCTGGGGGACCTCAGCCAGCTCCGGGGCT...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCGGCTTCCACGTCAGCTaGAAAACCAAACACATAAAC +
Preference number: 4 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCGFHVS*KTKHIN
Trigger: GTTTATGTGTTTGGTTTTTCAGCTGACGTGGAAGCC...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTAATCACATGGAAATCTaGCAGGACAAGGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GPPNSTADPPTGPLGKPFNHMEI*QDKGKK
Trigger: TTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATT...AAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp AACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACAACCCTTTCCCAAAATaGACTTTTACCAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: NVGLPTPPRTRPLGHSGNNPFPK*TFTKED
Trigger: GTCCTCTTTGGTAAAAGTTCATTTTGGGAAAGGGTT...GTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp CCAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGCACAGCCCCAAACGCTaGGGAACGTGGGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PGLPSNPEYLPSSLLRRGHSPKR*GTWASQ
Trigger: TTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTG...CCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGAGAACCACTGCCGACTaGCCGTTCCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QAREYTWAQFTSPNHRGRRTTAD*PFQCCP
Trigger: GGGACAGCATTGGAACGGTCAGTCGGCAGTGGTTCT...CCTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTATCAAGTGGTTTTACTaGAGTGAGCTGGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: APNAEERGPPNSTADPPTIKWFY*SELGKL
Trigger: AAGTTTTCCCAGCTCACTTCAGTAAAACCACTTGAT...AGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CTCAGAGTCAAAGGAAGCCTGTGCTTCAGGGCAGGTAAGACCTCAAGTGGACCTCAGGCCTCACCCTGGTaGAAGGGCACCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRVKGSLCFRAGKTSSGPQASPW*KGTSRS
Trigger: AGACCTGCTGGTGCCCTTGCACCAGGGTGAGGCCTG...AGGTCCACTTGAGGTCTTACCTGCCCTGAAGCACAGGCTTCCTTTGACTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CTCAGAGTCAAAGGAAGCCTGTGCTTCAGGGCAGGTAAGACCTCAAGTGGACCTCCATCCCAGGTGTCCTaGCCTCACATCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LRVKGSLCFRAGKTSSGPPSQVS*PHICQP
Trigger: GGGCTGGCAGATGTGAGGGCAGGACACCTGGGATGG...AGGTCCACTTGAGGTCTTACCTGCCCTGAAGCACAGGCTTCCTTTGACTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGGAAGGCCATGCCTCTaGAGGACGCTCGCACTGATT +
Preference number: 4 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKGRPCL*RTLALI
Trigger: AATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCC...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAGGGCCAAGATCACTTaGGCGACCTTGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGRAKIT*ATLRRP
Trigger: CGGCCGCCTCAAGGTCGCCCAAGTGATCTTGGCCCT...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTTCATTGGTGCTCTGCTaGCGGACGCTGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGSLVLC*RTLTLH
Trigger: ATGGAGAGTCAGCGTCCGCCAGCAGAGCACCAATGA...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CCAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGACAGGCAGCCCCCTTTaGGCCTGGGTCAGCCTACGA +
Preference number: 4 (lower is better)
Translates to: PGLPSNPEYLPSSLLRRGTGSPL*AWVSLR
Trigger: TCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGT...CCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CCGAGCCTAGCCAGAGCATCCACAACGAACCAATCTGAGATCCGAGTGGAAGATACAGGCAGCCCCCTTTaGGCCTGGGTCAGCCTACGA +
Preference number: 4 (lower is better)
Translates to: PSLARASTTNQSEIRVEDTGSPL*AWVSLR
Trigger: TCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGT...ATCTTCCACTCGGATCTCAGATTGGTTCGTTGTGGATGCTCTGGCTAGGCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCGCCAGAGAATACACTTaGGCTCAGTTCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPAREYT*AQFTSP
Trigger: TGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGC...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGTGGCTGCCCTCTCTGTaGGAGCAGAGGGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGWLPSL*EQRGDE
Trigger: CTCGTCTCCCCTCTGCTCCCACAGAGAGGGCAGCCA...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp GGGACACTGCTCCCAACTCAGATCGTACTGAAGGTGTaGGTGCAGGAAGCTAACCCCAACTCCGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: GTLLPTQIVLKV*VQEANPNSDPQ
Trigger: CTGGGGGTCGGAGTTGGGGTTAGCTTCCTGCACCAACACCTTCAGTACGATCTGAGTTGGGAGCAGTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp CTGGGCCGGACTTGCCCATGCTGGCTTCAGCTCACATaGCCAAGGAAGATGTGTATTGGGGCTGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGRTCPCWLQLT*PRKMCIGAVQA
Trigger: AGCCTGCACAGCCCCAATACACATCTTCCTTGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCCCAAAATGTGGTCTCTATGCAGATaGATGCAATCAGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: NSTADPPTGPLGKPFPKMWSLCR*MQSGPR
Trigger: TCTTGGCCCTGATTGCATTCATCTGCATAGAGACCA...CATTTTGGGAAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp AACAGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCAAATGGGTTACAGAGTaGAAGAGTTGGGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: NRQPPLGLGQPTSPSQVSKWVTE*KSWEQA
Trigger: TGCCTGTTCCCAACTCTTTCACTCTGTAACCCATTT...GGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAGGAGGTCAGGGCTCTaGTGCTACTCTTCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPRRSGL*CYSSVC
Trigger: ACAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCT...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTAGTGGACCTGGGCAGTaGCGCCGGCTGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEASGPGQ*RRLLHS
Trigger: GCTGTGGAGCAGCCGGCGTCACTGCCCAGGTCCACT...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CCAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGTGCCTAAGGCTGCCTaGGAACCACTGCCGACTGAC +
Preference number: 4 (lower is better)
Translates to: PGLPSNPEYLPSSLLRRGVPKAA*EPLPTD
Trigger: GTCAGTCGGCAGTGGTTCTCAGGCAGCCTTAGGCAC...CCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCACATTTGTCAGCACTTaGTCTTGGGGATTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCTFVST*SWGFLH
Trigger: ATGGAGAAATCCCCAAGATCAAGTGCTGACAAATGT...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGGGCTTAACCCAAGGCTaGCTCACTAGGACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRGLTQG*LTRTAS
Trigger: GGAAGCTGTCCTAGTGAGTCAGCCTTGGGTTAAGCC...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCAAGAATTCACGTACATaGGTGCACAAAGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCKNSRT*VHKGVG
Trigger: TCCAACACCTTTGTGCACTCATGTACGTGAATTCTT...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATATGTGTATTGGGGCTGTaGAGGCTGCCACATTCTTGC +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRICVLGL*RLPHSC
Trigger: GCAAGAATGTGGCAGCCTGCACAGCCCCAATACACA...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GGCGTCTTCATATTCACCTTGGATAACCCTATTCCCTCCAGAACTTTCGTCACCTCACCGGCTCGGTGGTaGGCTGGTACGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GVFIFTLDNPIPSRTFVTSPARW*AGTGCW
Trigger: CCAGCAGCCCGTACCAGCCCACCACCGAGCCGGTGA...GGTGACGAAAGTTCTGGAGGGAATAGGGTTATCCAAGGTGAATATGAAGACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATGCCAGAGAATACACTTaGGCTCAGTTCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHAREYT*AQFTSP
Trigger: TGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGC...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGCACGTGTCCAGGCGCTaGATCTCAGGGCGACTGTCC +
Preference number: 4 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGHVSRR*ISGRLS
Trigger: GGACAGTCGCCCTGAGATCCAGCGCCTGGACACGTG...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCGGCAAGTGCTTTGGCTaGTGGAGTAGGCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPGKCFG*WSRLVS
Trigger: AGAAACAAGCCTACTCCACCAGCCAAAGCACTTGCC...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp AAGCTAACCCCAACTCCGACCCCCAGCCCAGCAGTGTaGCCTGATCAACACTGTGAGCTCAGATGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KLTPTPTPSPAV*PDQHCELRCCP
Trigger: AGGACAGCATCTGAGCTCACAGTGTTGATCAGGCAACACTGCTGGGCTGGGGGTCGGAGTTGGGGTTAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATACTGTCAGATTCCAGTTaGTCTGGGGGATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRILSDSS*SGGSSC
Trigger: ACATGAGGATCCCCCAGATCAACTGGAATCTGACAG...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCTCTCCCTTCAAACCCTaGGTATTTGCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPSPFKP*VFAFLT
Trigger: AGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGA...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGGCTTCCACGTCAGCTaGAAAACCAAACACATAAAC +
Preference number: 4 (lower is better)
Translates to: AVAGRPCLCRTLALILEGGFHVS*KTKHIN
Trigger: GTTTATGTGTTTGGTTTTTCAGCTGACGTGGAAGCC...CCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGCCATACATACAGACTTaGACCCAAAAGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QGKEPDTGLSPFYTQRQEPYIQT*TQKPGQ
Trigger: CTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGG...CTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTGGGCTGGTACGGGCTaGTGGCGCCCGAGATCATGG +
Preference number: 4 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEAWAGTG*WRPRSW
Trigger: CCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCA...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCAAATCATCACTGCCTTaGAGAATCACTAAATTGTTC +
Preference number: 4 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRKSSLP*RITKLF
Trigger: GAACAATTTAGTGATTCTGCAAGGCAGTGATGATTT...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAATCACCGGCTCGGTGGTaGGCTGGTACGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLESPARW*AGTGCW
Trigger: CCAGCAGCCCGTACCAGCCCACCACCGAGCCGGTGA...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTAGATTCCAGTTGATCTaGGGGATCCTCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGRFQLI*GILMCR
Trigger: CCTGCACATGAGGATCCCCCAGATCAACTGGAATCT...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGTCTGCTCCGGCTCTATaGTTTAAAGCAGCCAGTACG +
Preference number: 4 (lower is better)
Translates to: QGKEPDTGLSPFYTQRQESAPAL*FKAAST
Trigger: CGTACTGGCTGCTTTAAACCATAGAGCCGGAGCAGA...CTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGCTCGGATGTAGTCATTaGTGCTCTGCTGGCGGACGC +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGLGCSH*CSAGGR
Trigger: GCGTCCGCCAGCAGAGCACCAATGACTACATCCGAG...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CCA 90 bp AACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCTTTCCCAAAATGAAGCCAAAGGCTCCCTaGCCTTTGTGTATTATGCAT +
Preference number: 4 (lower is better)
Translates to: NSTADPPTGPLGKPFPKMKPKAP*PLCIMH
Trigger: ATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTT...CATTTTGGGAAAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTTGGGATACTTCCTACTaGGTGTCAGCACTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGWDTSY*VSALSS
Trigger: GGATGACAGTGCTGACACCCAGTAGGAAGTATCCCA...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGACTGTAATCCCTCTTCTGTGGCCTTTGGGCTaGTGCTGGCTGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALCGANKYLQPFMTVIPLLWPLG*CWLPGG
Trigger: GCCCCCAGGCAGCCAGCACCAGCCCAAAGGCCACAG...AAGAGGGATTACAGTCATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp TGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTaGTTCAGGCCTGAAGCCTGGAAAAGGCCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: WCHLAPHSKQPV*FRPEAWKRPPS
Trigger: GCTCGGCGGCCTTTTCCAGGCTTCAGGCCTGAACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
3UTR CAA 72 bp GCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTaGTTCAGGTCTCATTCACTGCAAGCAAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: AWATRRTWHPLG*FRSHSLQARIH
Trigger: GTGAATTCTTGCTTGCAGTGAATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp CTGGCCGTGTGTGGACCTCACCAGCCTACCAAGCTGTaGGGCCTGGACGTGGGTGCTGATAAAATAAGACAA +
Preference number: 4 (lower is better)
Translates to: LAVCGPHQPTKL*GLDVGADKIRQ
Trigger: TTGTCTTATTTTATCAGCACCCACGTCCAGGCCCAACAGCTTGGTAGGCTGGTGAGGTCCACACACGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTTGGTCTCTATGCAGATaGATGCAATCAGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGWSLCR*MQSGPR
Trigger: TCTTGGCCCTGATTGCATTCATCTGCATAGAGACCA...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCACCATCCCTACGCGTaGCTGACTTTCCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGHHPYA*LTFLIK
Trigger: TTTTATCAGGAAAGTCAGTCACGCGTAGGGATGGTG...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp TGGGGGTCCAAGCCAAAGGCTCCCTGGCCTTTGTGTATTATGCATCCCAAAGAAACGCAGACTCAACACTaGCTTGGAGCAGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WGSKPKAPWPLCIMHPKETQTQH*LGAGGA
Trigger: GGCACCACCTGCTCCAAGTCAGTGTTGAGTCTGCGT...TTCTTTGGGATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTTGGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGGCCTGCGTCCTGTCTaGGATGGCAGCCAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLEGLRPV*DGSQAS
Trigger: GCTGGCTTGGCTGCCATCTCAGACAGGACGCAGGCC...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTCCGAGATCATGGAGGTaGTCGAGGCCTCGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVPRSWR*SRPRPR
Trigger: TCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGG...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGCCGAGATCATGGAGGTaGTCGAGGCCTCGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLPRSWR*SRPRPR
Trigger: TCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGG...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp AACTCAAACTTTAAAAGTTTCAATAGCTCCCTGGGGGTCCAAGCCAAAGGCTCCTGGGCTGGTACGGGCTaGTGGCGCCCGAGATCATGG +
Preference number: 4 (lower is better)
Translates to: NSNFKSFNSSLGVQAKGSWAGTG*WRPRSW
Trigger: CCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCA...GGAGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAACTTTTAAAGTTTGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGTTCACACGGGGAGCATaGCATGATGGTCTCTATGCA +
Preference number: 4 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKFTRGA*HDGLYA
Trigger: TGCATAGAGACCATCATGGCATGCTCCCCGTGTGAA...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp GGCCCCAACCCACTCCATACATACAGACTTGAACCCAAAAGCCAGGCCAGCCAGTGCCTTCCTCACTTCTaGGAAGAGGGGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: GPNPLHTYRLEPKSQASQCLPHF*EEGNRI
Trigger: GATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCA...CTGGCTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGAGTGGGTTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp AAAAATGGGATACTTCCTACTGGGTGTCAGCACTGTCATCCTAAGGCAACTCAGTCCTGCCCTCACATCTaGCAGCCCTCAGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: KNGILPTGCQHCHPKATQSCPHI*QPSGRP
Trigger: TGGCCGGCCTGAGGGCTGGCAGATGTGAGGGCAGGA...CTGAGTTGCCTTAGGATGACAGTGCTGACACCCAGTAGGAAGTATCCCATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATGTGGCAGGAAGGCCATaGCTCTGCAGGACGCTCGCA +
Preference number: 4 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNVAGRP*LCRTLA
Trigger: TGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCAC...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTGACTGTCCACATCCCTaGACTCCGTGCGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVDCPHP*TPCGLG
Trigger: TCCGAGCCCGCACGGAGTCCAGGGATGTGGACAGTC...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGAAAGTGTCCAGGCGCTaGATCTCAGGGCGACTGTCC +
Preference number: 4 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGKVSRR*ISGRLS
Trigger: GGACAGTCGCCCTGAGATCCAGCGCCTGGACACTTT...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330687.8
CDS-3UTR CCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAGCCAAAGGCTCCCTaGCCTTTGTGTATTATGCAT +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPKPKAP*PLCIMH
Trigger: ATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTT...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GGCCCCAACCCACTCCATACATACAGACTTGAACCCAAAAGCCAGGCCAGCCAGGTGCCTTCTGAAACATaGGTGGAAGGGTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GPNPLHTYRLEPKSQASQVPSET*VEGCVL
Trigger: CAGAACACACCCTTCCACCCATGTTTCAGAAGGCAC...CTGGCTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGAGTGGGTTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGAGCTGTGAGCTGGCCTaGCTGCCCTCTCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLSCELA*LPSLWE
Trigger: CTCCCACAGAGAGGGCAGCCAGGCCAGCTCACAGCT...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CCAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGCGGACTTGCCCATGCTaGCTTCAGCTCACATTGCCA +
Preference number: 4 (lower is better)
Translates to: PGLPSNPEYLPSSLLRRGRTCPC*LQLTLP
Trigger: TGGCAATGTGAGCTGAAGCCAGCATGGGCAAGTCCG...CCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GGCCCCAACCCACTCCATACATACAGACTTGAACCCAAAAGCCAGGCCAGCCAGACCTCTCAGAGCACATaGATAGGTGACGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GPNPLHTYRLEPKSQASQTSQST*IGDGFL
Trigger: GAGAAACCCGTCACCTATCCATGTGCTCTGAGAGGT...CTGGCTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGAGTGGGTTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACCTGATAGCAGACAGGTaGGGTGTTCCAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VSLQTLSICLPHFCEEGNLIADR*GVPGHC
Trigger: GCAGTGGCCTGGAACACCCCACCTGTCTGCTATCAG...GTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGTCTCCCTTCAAACCCTaGGTATTTGCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKSPFKP*VFAFLT
Trigger: AGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGA...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGACTGTAATCCCTCTTGATCCGAGTGGAAGATaGGAGCCCCGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALCGANKYLQPFMTVIPLDPSGR*EPRSWL
Trigger: CAGCCAGCTCCGGGGCTCTCATCTTCCACTCGGATC...AAGAGGGATTACAGTCATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp TGGGGGTCCAAGCCAAAGGCTCCCTGGCCTTTGTGTATTATGCATCCCAAAGAATGTTTTGTTCAGGCCTaGAGCCTGGAAAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: WGSKPKAPWPLCIMHPKECFVQA*SLEKAA
Trigger: GGCGGCCTTTTCCAGGCTTCAGGCCTGAACAAAACA...TTCTTTGGGATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTTGGACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CCAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGAGCAAAAGGAGCCGGTaGAGAGTACGTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PGLPSNPEYLPSSLLRRGSKRSR*RVRVCV
Trigger: GACACAGACACGTACTCTTCACCGGCTCCTTTTGCT...CCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGAAAAGTGCCACCAGGTaGAGTACCACGGAGAAATCA +
Preference number: 4 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRKSATR*STTEKS
Trigger: TGATTTCTCCGTGGTACTTCACCTGGTGGCACTTTT...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGTACAAAGCTAAAAGCTaGGGGTGTCAGGCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGYKAKS*GCQACV
Trigger: GACGCAGGCCTGACACCCTCAGCTTTTAGCTTTGTA...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp TCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGACATCCCTGGACTCCGTaGGGGCTCGGATGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: SLQTLSICLPHFCEEGNRHPWTP*GLGCSH
Trigger: ATGACTACATCCGAGCCCGCACGGAGTCCAGGGATG...TCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTCCATCCCAGGTGTCCTaGCCTCACATCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLPSQVS*PHICQP
Trigger: GGGCTGGCAGATGTGAGGGCAGGACACCTGGGATGG...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp GTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACCTGCCTGAGAACCACTaGCGACTGACCGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: VSLQTLSICLPHFCEEGNLPENH*RLTVPM
Trigger: CATTGGAACGGTCAGTCGGCAGTGGTTCTCAGGCAG...GTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAAACTTGGAGCAGGTGGTaGCTAAGGCTGCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGETWSRW*LRLPEN
Trigger: GTTCTCAGGCAGCCTTAGGCACCACCTGCTCCAAGT...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGTGGCCTTTGGGCTGGTaGTGGCTGCCTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQWPLGW*WLPGGP
Trigger: AGGGCCCCCAGGCAGCCAGCACCAGCCCAAAGGCCA...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGAGCTGGGCCGGACTTaGCCATGCTGGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLEELGRT*PCWLQL
Trigger: GAGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTC...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp AACTCAAACTTTAAAAGTTTCAATAGCTCCCTGGGGGTCCAAGCCAAAGGCTCCGACTGTCCACATCCCTaGACTCCGTGCGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: NSNFKSFNSSLGVQAKGSDCPHP*TPCGLG
Trigger: TCCGAGCCCGCACGGAGTCCAGGGATGTGGACAGTC...GGAGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAACTTTTAAAGTTTGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGACTGTCCACATCCCTaGACTCCGTGCGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLDCPHP*TPCGLG
Trigger: TCCGAGCCCGCACGGAGTCCAGGGATGTGGACAGTC...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CCA 90 bp CCGAGCCTAGCCAGAGCATCCACAACGAACCAATCTGAGATCCGAGTGGAAGATGTTTCAATAGCTCCCTaGGGGTCCAAGCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PSLARASTTNQSEIRVEDVSIAP*GSKPKA
Trigger: AGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAAC...ATCTTCCACTCGGATCTCAGATTGGTTCGTTGTGGATGCTCTGGCTAGGCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAATCTGAGATCCGAGTaGAAGATGAGAGCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGNLRSE*KMRAPE
Trigger: CTCCGGGGCTCTCATCTTCCACTCGGATCTCAGATT...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATTTCAGGCCTGAAGCCTaGAAAAGGCCGCCGAGCCTA +
Preference number: 4 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHFRPEA*KRPPSL
Trigger: TAGGCTCGGCGGCCTTTTCCAGGCTTCAGGCCTGAA...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CCGAGCCTAGCCAGAGCATCCACAACGAACCAATCTGAGATCCGAGTGGAAGATGACTCAACACTGACTTaGAGCAGGTGGTGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: PSLARASTTNQSEIRVEDDSTLT*SRWCLR
Trigger: CCTTAGGCACCACCTGCTCCAAGTCAGTGTTGAGTC...ATCTTCCACTCGGATCTCAGATTGGTTCGTTGTGGATGCTCTGGCTAGGCTCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCACTTTCGTCACCACGTaGTCTATACATGATGACATG +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPTFVTT*SIHDDM
Trigger: CATGTCATCATGTATAGACCACGTGGTGACGAAAGT...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CCGAGCCTAGCCAGAGCATCCACAACGAACCAATCTGAGATCCGAGTGGAAGATCTGTCAGATTCCAGTTaGTCTGGGGGATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: PSLARASTTNQSEIRVEDLSDSS*SGGSSC
Trigger: ACATGAGGATCCCCCAGATCAACTGGAATCTGACAG...ATCTTCCACTCGGATCTCAGATTGGTTCGTTGTGGATGCTCTGGCTAGGCTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CTCAGAGTCAAAGGAAGCCTGTGCTTCAGGGCAGGTAAGACCTCAAGTGGACCTCTGTCAGATTCCAGTTaGTCTGGGGGATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: LRVKGSLCFRAGKTSSGPLSDSS*SGGSSC
Trigger: ACATGAGGATCCCCCAGATCAACTGGAATCTGACAG...AGGTCCACTTGAGGTCTTACCTGCCCTGAAGCACAGGCTTCCTTTGACTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp TCACAAGCTAATGGCAGTCCCTGGAGCAGGAAGCAACTTGTTATTCTGCTCAAGTCTGCTGGCGGACGCTaGCTCTCCATTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SQANGSPWSRKQLVILLKSAGGR*LSISAL
Trigger: CAGTGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGA...CTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCATTAGCTTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCTGACTAAGGTGGTCTaGGATATGTTCTTACTCCTA +
Preference number: 4 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGLTKVV*DMFLLL
Trigger: TAGGAGTAAGAACATATCTCAGACCACCTTAGTCAG...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CTCAGAGTCAAAGGAAGCCTGTGCTTCAGGGCAGGTAAGACCTCAAGTGGACCTGAAAGAAAACTTGACTaGGAGACAGGCACGAGGACG +
Preference number: 4 (lower is better)
Translates to: LRVKGSLCFRAGKTSSGPERKLD*ETGTRT
Trigger: CGTCCTCGTGCCTGTCTCTCAGTCAAGTTTTCTTTC...AGGTCCACTTGAGGTCTTACCTGCCCTGAAGCACAGGCTTCCTTTGACTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR GCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCACTGCAAAATCTTCCTaGCACAGTAAGTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPTAKSS*HSKCFL
Trigger: CAAAAAGCACTTACTGTGGCAGGAAGATTTTGCAGT...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAATGGCGCCCGAGATCATaGAGGTGCTCGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKWRPRS*RCSRPR
Trigger: GCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCA...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTCGGATGTAGTCATTaGTGCTCTGCTGGCGGACGC +
Preference number: 4 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNLGCSH*CSAGGR
Trigger: GCGTCCGCCAGCAGAGCACCAATGACTACATCCGAG...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CCA 90 bp TACCAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGCGCGGACCCGCCCACTaGGCCACTCGGGAAACCCTT +
Preference number: 4 (lower is better)
Translates to: YQRGQNSTESHGNLTGQGRGPAH*ATRETL
Trigger: AAGGGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCG...CCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp TGGGGGTCCAAGCCAAAGGCTCCCTGGCCTTTGTGTATTATGCATCCCAAAGAAAGTGCACAAAGGTGTTaGAGCTTGGTCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WGSKPKAPWPLCIMHPKESAQRC*SLVSSG
Trigger: GCCTGAGGAGACCAAGCTCCAACACCTTTGTGCACT...TTCTTTGGGATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTTGGACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TCACAAGCTAATGGCAGTCCCTGGAGCAGGAAGCAACTTGTTATTCTGCTCAAGCTTATCTCCCAGACCTaGCCGTGTGTGGACCTCACC +
Preference number: 4 (lower is better)
Translates to: SQANGSPWSRKQLVILLKLISQT*PCVDLT
Trigger: GGTGAGGTCCACACACGGCCAGGTCTGGGAGATAAG...CTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCATTAGCTTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AACTCAAACTTTAAAAGTTTCAATAGCTCCCTGGGGGTCCAAGCCAAAGGCTCCTCTGCTGGCGGACGCTaGCTCTCCATTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: NSNFKSFNSSLGVQAKGSSAGGR*LSISAL
Trigger: CAGTGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGA...GGAGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAACTTTTAAAGTTTGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAATCTGCTGGCGGACGCTaGCTCTCCATTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLESAGGR*LSISAL
Trigger: CAGTGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGA...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR TCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATACCAAGTAGGTCAATTTaGGGCAAGATTCAAAAACTC +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRIPSRSI*GKIQKL
Trigger: GAGTTTTTGAATCTTGCCTCAAATTGACCTACTTGG...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATTACTACTTAGCCATCTaGCTTGACTTCCTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHYYLAI*LDFLGY
Trigger: ATAACCAAGGAAGTCAAGTCAGATGGCTAAGTAGTA...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGAAAACAGTGGACCTGGGCAGTaGCGCCGGCTGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GQNSTESHGNLTGQGKENSGPGQ*RRLLHS
Trigger: GCTGTGGAGCAGCCGGCGTCACTGCCCAGGTCCACT...GTTTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR TCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGATCATGGGGACTCACTaGACTCATTCACCACACACA +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGIMGTH*THSPHT
Trigger: TGTGTGTGGTGAATGAGTTCAGTGAGTCCCCATGAT...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGCTCTTGCCCTCAAGCTaGCTGTGGAACGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLRLLPSS*LWNARQ
Trigger: CTGTCTCGCGTTCCACAGTCAGCTTGAGGGCAAGAG...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CTCAGAGTCAAAGGAAGCCTGTGCTTCAGGGCAGGTAAGACCTCAAGTGGACCTTGGGGGATCCTCATGTaGAGGTTGAGACTGAACATA +
Preference number: 4 (lower is better)
Translates to: LRVKGSLCFRAGKTSSGPWGILM*RLRLNI
Trigger: TATGTTCAGTCTCAACCTGCACATGAGGATCCCCCA...AGGTCCACTTGAGGTCTTACCTGCCCTGAAGCACAGGCTTCCTTTGACTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR GCA 90 bp TCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGATGTGTTCACTGCATATaGCGCAGTCGCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLQTLSICLPHFCEEGNRCVHCI*RSRQEA
Trigger: GGCTTCTTGGCGACTGCGGCATATGCAGTGAACACA...TCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGGAATGTGTTCACTaGATATGCCGCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGEQECVH*ICRSRQ
Trigger: TTGGCGACTGCGGCATATGCAGTGAACACATTCCTG...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp CACATAAACCTAAGTTTGCCCAACGGGCATCGCCTCAGAAAGCCCACAGTTGTGCAGGAATGTGTTCACTaGATATGCCGCAGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: HINLSLPNGHRLRKPTVVQECVH*ICRSRQ
Trigger: TTGGCGACTGCGGCATATGCAGTGAACACATTCCTG...CACAACTGTGGGCTTTCTGAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp CTAAGGTCGCTCAGCCTTCAAATGCCCCAAACCAAACTGATATTGGTCCCTATTCATCCCTGGACTCCGTaGGGGCTCGGATGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: LRSLSLQMPQTKLILVPIHPWTP*GLGCSH
Trigger: ATGACTACATCCGAGCCCGCACGGAGTCCAGGGATG...AATAGGGACCAATATCAGTTTGGTTTGGGGCATTTGAAGGCTGAGCGACCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGGCCTTTGTGTATTATaGATCCCAAAGAAAACACGC +
Preference number: 4 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKGLCVL*IPKKTR
Trigger: GCGTGTTTTCTTTGGGATGCATAATACACAAAGGCC...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp AGCCCAAACCACAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCGTTGTGTCTTTAAACTaGCGAAATGAAAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: SPNHRGRSRTPASHHFTPVVSLN*RNERDL
Trigger: CAAGTCTCTTTCATTTCGGCAGTTTAAAGACACAAC...GGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTGTGGTTTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATGGCAATGTGAGGCTTTaGCTGCTGTCGGGGACAAAT +
Preference number: 4 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHGNVRL*LLSGTN
Trigger: ATTTGTCCCCGACAGCAGGCAAAGCCTCACATTGCC...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp TACCAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGGGCAGTGACGCCGGCTaGTCCACAGCCCCAAACGCT +
Preference number: 4 (lower is better)
Translates to: YQRGQNSTESHGNLTGQGGSDAG*STAPNA
Trigger: AGCGTTTGGGGCTGTGGAGCAGCCGGCGTCACTGCC...CCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR GCA 90 bp TGGGGGTCCAAGCCAAAGGCTCCCTGGCCTTTGTGTATTATGCATCCCAAAGAATGGGGCTGTGCAGGCTaGCACATTCTTGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: WGSKPKAPWPLCIMHPKEWGCAG*HILAFS
Trigger: AGAAAAAGCAAGAATGTGGCAGCCTGCACAGCCCCA...TTCTTTGGGATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTTGGACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGTCTGCTCCGGCTCTATaGTTTAAAGCAGCCAGTACG +
Preference number: 4 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGSAPAL*FKAAST
Trigger: CGTACTGGCTGCTTTAAACCATAGAGCCGGAGCAGA...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATTCATTGGTGCTCTGCTaGCGGACGCTGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNSLVLC*RTLTLH
Trigger: ATGGAGAGTCAGCGTCCGCCAGCAGAGCACCAATGA...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CCA 90 bp AAGCAGGCAAGCAAAGCAGGGCCCTATGAAATAGATACACAGTTCAAGGACCCATCATTGGTGCTCTGCTaGCGGACGCTGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KQASKAGPYEIDTQFKDPSLVLC*RTLTLH
Trigger: ATGGAGAGTCAGCGTCCGCCAGCAGAGCACCAATGA...TGGGTCCTTGAACTGTGTATCTATTTCATAGGGCCCTGCTTTGCTTGCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR CCA 90 bp GCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCCTATGAAAAAAGTGTCCAGGCGCTaGATCTCAGGGCGACTGTCC +
Preference number: 4 (lower is better)
Translates to: ACKIDSGKSRQAKQGPMKKVSRR*ISGRLS
Trigger: GGACAGTCGCCCTGAGATCCAGCGCCTGGACACTTT...TTTCATAGGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR CCA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATTGCTTATGCGACGCATaGAAGGCACCAGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHCLCDA*KAPEVK
Trigger: CTTCACCTCTGGTGCCTTCCATGCGTCGCATAAGCA...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAACTGACTTGGAGCAGGTaGTGCCTAAGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLELTWSR*CLRLPE
Trigger: CTCAGGCAGCCTTAGGCACCACCTGCTCCAAGTCAG...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CATCTGTTCTTCCCAGCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGATGGAAGATGAGGAGTaGGCTGGATCCCAGCACGCA +
Preference number: 4 (lower is better)
Translates to: HLFFPALCGANKYLQPFMMEDEE*AGSQHA
Trigger: TGCGTGCTGGGATCCAGCCCACTCCTCATCTTCCAT...CATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGCTGGGAAGAACAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TGGGGGTCCAAGCCAAAGGCTCCCTGGCCTTTGTGTATTATGCATCCCAAAGAAGATGGTCCTTCCAAGTaGGCCCCATTTAATGCAAGG +
Preference number: 4 (lower is better)
Translates to: WGSKPKAPWPLCIMHPKEDGPSK*APFNAR
Trigger: CCTTGCATTAAATGGGGCCCACTTGGAAGGACCATC...TTCTTTGGGATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTTGGACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAACCAAGCGCTCAGAGCTaGGCCGGACTTGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKPSAQS*AGLAHA
Trigger: AGCATGGGCAAGTCCGGCCCAGCTCTGAGCGCTTGG...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTGCCACACGCAGGACATaGCACCCACTAGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSICLPHFCEEGNRILKLATRRT*HPLGLF
Trigger: GAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGC...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TACCAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGCCAAGATCGGCTCGGTaGTGGGCTGGTACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YQRGQNSTESHGNLTGQGPRSAR*WAGTGC
Trigger: GCAGCCCGTACCAGCCCACCACCGAGCCGATCTTGG...CCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563952.1
CDS-3UTR TCA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAATGGTCTCTATGCAGATaGATGCAATCAGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGEWSLCR*MQSGPR
Trigger: TCTTGGCCCTGATTGCATTCATCTGCATAGAGACCA...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGTTTCTTTGTACTGTTTaGGGTGAGCAGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGFLCTV*GEQWLQ
Trigger: TTGGAGCCACTGCTCACCTCAAACAGTACAAAGAAA...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAAAAGTGCCACCAGGTaGAGTACCACGGAGAAATCA +
Preference number: 4 (lower is better)
Translates to: VSLQTLSICLPHFCEEGNKSATR*STTEKS
Trigger: TGATTTCTCCGTGGTACTTCACCTGGTGGCACTTTT...GTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATTGTGTTCACTGCATATaGCGCAGTCGCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNCVHCI*RSRQEA
Trigger: GGCTTCTTGGCGACTGCGGCATATGCAGTGAACACA...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp GTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACTCTCCATTTCTGCACTaGCAGGAATGTGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: VSLQTLSICLPHFCEEGNSPFLH*QECVHC
Trigger: GCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGA...GTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATAATCTGTACCTTCATTTaGAATGGCTCAGCTAGTTTA +
Preference number: 4 (lower is better)
Translates to: MPLQDARTDSGRGPGQRIICTFI*NGSASL
Trigger: TAAACTAGCTGAGCCATTGCAAATGAAGGTACAGAT...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp TACCAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGGACTGTCCACATCCCTaGACTCCGTGCGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: YQRGQNSTESHGNLTGQGDCPHP*TPCGLG
Trigger: TCCGAGCCCGCACGGAGTCCAGGGATGTGGACAGTC...CCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp CATCTGTTCTTCCCAGCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGGTTTCAATAGCTCCCTaGGGGTCCAAGCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: HLFFPALCGANKYLQPFMVSIAP*GSKPKA
Trigger: AGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAAC...CATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGCTGGGAAGAACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGAGCCCCCTTTGGGCCTaGGTCAGCCTACGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQSPLWA*VSLRVH
Trigger: ATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCT...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGGGCTTGTTTCTTTCATaGCTTTTACCTGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QAREYTWAQFTSPNHRGRGLFLS*LLPEKV
Trigger: TACCTTCTCAGGTAAAAGCCATGAAAGAAACAAGCC...CCTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGACTGTAATCCCTCTTGCACCCGACATAGGGTaGAGGTCAGACACATTCCCT +
Preference number: 4 (lower is better)
Translates to: ALCGANKYLQPFMTVIPLAPDIG*RSDTFP
Trigger: AGGGAATGTGTCTGACCTCCACCCTATGTCGGGTGC...AAGAGGGATTACAGTCATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGAAGAAAAGGTACGCCTaGGCCACACGCAGGACATGG +
Preference number: 4 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLRKKRYA*ATRRTW
Trigger: CCATGTCCTGCGTGTGGCCCAGGCGTACCTTTTCTT...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp CAAGCAAGAATTCACGTACATGAGTGCACAAAGGTGTaGGAGCTTGGTCTCCTCAGGCTTAACCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QARIHVHECTKV*ELGLLRLNPRL
Trigger: CAGCCTTGGGTTAAGCCTGAGGAGACCAAGCTCCAACACCTTTGTGCACTCATGTACGTGAATTCTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp CACAAGCTAATGGCAGTCCCTGGAGCAGGAAGCAACTaGTTATTCTGCTCAAGAGAATCCACCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HKLMAVPGAGSN*LFCSRESTSSS
Trigger: AGAGCTGCTGGTGGATTCTCTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCATTAGCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCCTATGCTGTCAGATTCCAGTTaGTCTGGGGGATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: EACKIDSGKSRQAKQGPMLSDSS*SGGSSC
Trigger: ACATGAGGATCCCCCAGATCAACTGGAATCTGACAG...CATAGGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR TCA 90 bp TCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGATCCCATCAGCAAAGCTaGCTAAGGTGGTCTGAGATA +
Preference number: 4 (lower is better)
Translates to: SLQTLSICLPHFCEEGNRSHQQS*LRWSEI
Trigger: TATCTCAGACCACCTTAGTCAGCTTTGCTGATGGGA...TCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAGGGGAACAGAATCTTaGAGCTTGCAAAATCGATTC +
Preference number: 4 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGRGTES*SLQNRF
Trigger: GAATCGATTTTGCAAGCTTCAAGATTCTGTTCCCCT...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR TCA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAAGCAAAAGGAGCCGGTaGAGAGTACGTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLESKRSR*RVRVCV
Trigger: GACACAGACACGTACTCTTCACCGGCTCCTTTTGCT...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCCATACATACAGACTTaGACCCAAAAGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNPYIQT*TQKPGQ
Trigger: CTGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGG...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGTTCATGGCTTTTACCTaGGAAGGTAAAATGACTGAA +
Preference number: 4 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRFMAFT*EGKMTE
Trigger: TTCAGTCATTTTACCTTCTCAGGTAAAAGCCATGAA...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CTCAGAGTCAAAGGAAGCCTGTGCTTCAGGGCAGGTAAGACCTCAAGTGGACCTCCCTCTTTCACCAGATaGTCAAGTGGTTTTACTGAA +
Preference number: 4 (lower is better)
Translates to: LRVKGSLCFRAGKTSSGPPSFTR*SSGFTE
Trigger: TTCAGTAAAACCACTTGATCATCTGGTGAAAGAGGG...AGGTCCACTTGAGGTCTTACCTGCCCTGAAGCACAGGCTTCCTTTGACTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp TCACAAGCTAATGGCAGTCCCTGGAGCAGGAAGCAACTTGTTATTCTGCTCAAGGTCCCACCAGAACACTaGGAAAAACTAAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: SQANGSPWSRKQLVILLKVPPEH*EKLRSL
Trigger: GAGCGACCTTAGTTTTTCTCAGTGTTCTGGTGGGAC...CTTGAGCAGAATAACAAGTTGCTTCCTGCTCCAGGGACTGCCATTAGCTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTAAGATCTGGAGAAGATaGCAGTCAGGCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEAKIWRR*QSGSGT
Trigger: TGTGCCACTGCCTGACTGTCATCTTCTCCAGATCTT...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGCATCCCTGGACTCCGTaGGGGCTCGGATGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQHPWTP*GLGCSH
Trigger: ATGACTACATCCGAGCCCGCACGGAGTCCAGGGATG...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGCAAACCCTGAGTATTTaGCTTCCTCACTTCTGCGAA +
Preference number: 4 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGQTLSI*LPHFCE
Trigger: TTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTG...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCAGGAAGGCCATGCCTCTaGAGGACGCTCGCACTGATT +
Preference number: 4 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSGRPCL*RTLALI
Trigger: AATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCC...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGGAAGCTTCCCACTCTaGAGTGGCAGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: RILKLAKSILEKAGKQSRGSFPL*SGRKAM
Trigger: CATGGCCTTCCTGCCACTGCAGAGTGGGAAGCTTCC...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGGGCAATGTGAGGCTTTaGCTGCTGTCGGGGACAAAT +
Preference number: 4 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLRGNVRL*LLSGTN
Trigger: ATTTGTCCCCGACAGCAGGCAAAGCCTCACATTGCC...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CACATAAACCTAAGTTTGCCCAACGGGCATCGCCTCAGAAAGCCCACAGTTGTGTCCTGCCACAGTAAGTaGTTTTTGGTGAGGGCTAAA +
Preference number: 4 (lower is better)
Translates to: HINLSLPNGHRLRKPTVVSCHSK*FLVRAK
Trigger: TTTAGCCCTCACCAAAAAGCACTTACTGTGGCAGGA...CACAACTGTGGGCTTTCTGAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CTAAGGTCGCTCAGCCTTCAAATGCCCCAAACCAAACTGATATTGGTCCCTATTCATAGCCTGGGACACTaGTCCCAACTCAGATCGTAC +
Preference number: 4 (lower is better)
Translates to: LRSLSLQMPQTKLILVPIHSLGH*SQLRSY
Trigger: GTACGATCTGAGTTGGGAGCAGTGTCCCAGGCTATG...AATAGGGACCAATATCAGTTTGGTTTGGGGCATTTGAAGGCTGAGCGACCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCGGACTTGCCCATaGTGGCTTCAGCTCACATTG +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQGRTCP*WLQLTL
Trigger: CAATGTGAGCTGAAGCCAGCATGGGCAAGTCCGGCC...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAAGGGCCAAGATCACTTaGGCGACCTTGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: QRGQNSTESHGNLTGQGKRAKIT*ATLRRP
Trigger: CGGCCGCCTCAAGGTCGCCCAAGTGATCTTGGCCCT...TTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCCTTCTGCTCCGGCTCTATaGTTTAAAGCAGCCAGTACG +
Preference number: 4 (lower is better)
Translates to: LEACKIDSGKSRQAKQGPSAPAL*FKAAST
Trigger: CGTACTGGCTGCTTTAAACCATAGAGCCGGAGCAGA...AGGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR CCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACCTCGGATGTAGTCATTaGTGCTCTGCTGGCGGACGC +
Preference number: 4 (lower is better)
Translates to: FICNGSASLLKGFGTRHNLGCSH*CSAGGR
Trigger: GCGTCCGCCAGCAGAGCACCAATGACTACATCCGAG...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACTTCAGGCCTGAAGCCTaGAAAAGGCCGCCGAGCCTA +
Preference number: 4 (lower is better)
Translates to: FICNGSASLLKGFGTRHNFRPEA*KRPPSL
Trigger: TAGGCTCGGCGGCCTTTTCCAGGCTTCAGGCCTGAA...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAACCAAGCTGTTGGGCCTaGACGTGGGTGCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLEPSCWA*TWVLIK
Trigger: TTTTATCAGCACCCACGTCCAGGCCCAACAGCTTGG...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGCTGACTAAGGTGGTCTaGGATATGTTCTTACTCCTA +
Preference number: 4 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGLTKVV*DMFLLL
Trigger: TAGGAGTAAGAACATATCTCAGACCACCTTAGTCAG...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CATCTGTTCTTCCCAGCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGCACCATCCCTACGCGTaGCTGACTTTCCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: HLFFPALCGANKYLQPFMHHPYA*LTFLIK
Trigger: TTTTATCAGGAAAGTCAGTCACGCGTAGGGATGGTG...CATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGCTGGGAAGAACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCTGTGGGGTTCCAATTCCATGATTaGCAAGAGTGCTTATGCGAC +
Preference number: 4 (lower is better)
Translates to: SLQNRFWKKQASKAGPVGFQFHD*QECLCD
Trigger: GTCGCATAAGCACTCTTGTCAATCATGGAATTGGAA...CCCCACAGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGTGTTTTGTTCAGGCCTaGAGCCTGGAAAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQCFVQA*SLEKAA
Trigger: GGCGGCCTTTTCCAGGCTTCAGGCCTGAACAAAACA...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATACAATTAGTGCCTTCTaGAACATGGGTGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNTISAF*NMGGRV
Trigger: CACCCTTCCACCCATGTTTCAGAAGGCACTAATTGT...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AACTCAAACTTTAAAAGTTTCAATAGCTCCCTGGGGGTCCAAGCCAAAGGCTCCCAACTCAGATCGTACTaGAGGTGTTGGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NSNFKSFNSSLGVQAKGSQLRSY*RCWCRK
Trigger: CTTCCTGCACCAACACCTTCAGTACGATCTGAGTTG...GGAGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAACTTTTAAAGTTTGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGGACCCACATGTTCCTaGGCCAGATGCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: QRGQNSTESHGNLTGQGKGPTCS*ARCQEL
Trigger: GAGCTCCTGGCATCTGGCTCAGGAACATGTGGGTCC...TTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTTCTCCATTTCTGCACTaGCAGGAATGTGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVSPFLH*QECVHC
Trigger: GCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGA...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGTGCCTTCCTCACTTCTaGGAAGAGGGGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLRCLPHF*EEGNRI
Trigger: GATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCA...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAATCAGGTCTCATTCACTaGAAGCAAGAATTCACGTAC +
Preference number: 4 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGESGLIH*KQEFTY
Trigger: GTACGTGAATTCTTGCTTGCAGTGAATGAGACCTGA...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTAGATTCCAGTTGATCTaGGGGATCCTCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLRFQLI*GILMCR
Trigger: CCTGCACATGAGGATCCCCCAGATCAACTGGAATCT...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CCA 90 bp AAAAATGGGATACTTCCTACTGGGTGTCAGCACTGTCATCCTAAGGCAACTCAGTGGGATACTTCCTACTaGGTGTCAGCACTGTCATCC +
Preference number: 4 (lower is better)
Translates to: KNGILPTGCQHCHPKATQWDTSY*VSALSS
Trigger: GGATGACAGTGCTGACACCCAGTAGGAAGTATCCCA...CTGAGTTGCCTTAGGATGACAGTGCTGACACCCAGTAGGAAGTATCCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CTAAGGTCGCTCAGCCTTCAAATGCCCCAAACCAAACTGATATTGGTCCCTATTTCCACCAGCAGCTCTTaGCCTAGAAACTTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LRSLSLQMPQTKLILVPISTSSS*PRNFFP
Trigger: GGGGAAAAAGTTTCTAGGCCAAGAGCTGCTGGTGGA...AATAGGGACCAATATCAGTTTGGTTTGGGGCATTTGAAGGCTGAGCGACCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCAAGGACCCATCATCTaGACTTTTCTAGGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNQGPII*TFLGKL
Trigger: CAACTTGCCTAGAAAAGTTCAGATGATGGGTCCTTG...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR TCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTTCCCATCAGCAAAGCTaGCTAAGGTGGTCTGAGATA +
Preference number: 4 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLSHQQS*LRWSEI
Trigger: TATCTCAGACCACCTTAGTCAGCTTTGCTGATGGGA...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCCTATGAAATCTCCCTTCAAACCCTaGGTATTTGCCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: ACKIDSGKSRQAKQGPMKSPFKP*VFAFLT
Trigger: AGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGA...TTTCATAGGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR TCA 90 bp CATCTGTTCTTCCCAGCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGAAATGGGTTACAGAGTaGAAGAGTTGGGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: HLFFPALCGANKYLQPFMKWVTE*KSWEQA
Trigger: TGCCTGTTCCCAACTCTTTCACTCTGTAACCCATTT...CATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGCTGGGAAGAACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTTTCTTTGTACTGTTTaGGGTGAGCAGTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEAFLCTV*GEQWLQ
Trigger: TTGGAGCCACTGCTCACCTCAAACAGTACAAAGAAA...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GGCGTCTTCATATTCACCTTGGATAACCCTATTCCCTCCAGAACTTTCGTCACCACTATTTCTTGCAGCTaGCAACATATCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GVFIFTLDNPIPSRTFVTTISCS*QHILRR
Trigger: CCTCCTGAGGATATGTTGTCAGCTGCAAGAAATAGT...GGTGACGAAAGTTCTGGAGGGAATAGGGTTATCCAAGGTGAATATGAAGACGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTGTTCCACCAAATGCTTaGGGGTTTCAGCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: LSICLPHFCEEGNRILKLVPPNA*GFQLYS
Trigger: ACTGTACAGCTGAAACCCTCAAGCATTTGGTGGAAC...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGGAGCACATGGATAGGTaGCGGGTTTCTCATGTGAAT +
Preference number: 4 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLREHMDR*RVSHVN
Trigger: ATTCACATGAGAAACCCGTCACCTATCCATGTGCTC...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GCAAGCAAAGCAGGGCCCTATGAAATAGATACACAGTTCAAGGACCCATCATCTTGGGGGATCCTCATGTaGAGGTTGAGACTGAACATA +
Preference number: 4 (lower is better)
Translates to: ASKAGPYEIDTQFKDPSSWGILM*RLRLNI
Trigger: TATGTTCAGTCTCAACCTGCACATGAGGATCCCCCA...AGATGATGGGTCCTTGAACTGTGTATCTATTTCATAGGGCCCTGCTTTGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR GCA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTTCTCCATTTCTGCACTaGCAGGAATGTGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: LSICLPHFCEEGNRILKLSPFLH*QECVHC
Trigger: GCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGA...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGCAGCAAATGGGCAAGTaGTTTGGCTGGTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQQQMGK*FGWWSR
Trigger: CCTACTCCACCAGCCAAAGCACTTGCCCATTTGCTG...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTGGCTTCAGCTCACATTaGCAAGGAAGATGTGTATTG +
Preference number: 4 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVGFSSH*QGRCVL
Trigger: CAATACACATCTTCCTTGGCAATGTGAGCTGAAGCC...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CAACAAGCCCACCTGAATGGTGTTCTTGTTTTCAATCTCACTTCAAAGATGGCCGTCCCCATAACAAGATaGCCCCCATATTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QQAHLNGVLVFNLTSKMAVPITR*PPYSWR
Trigger: TCTCCAGGAATATGGGGGCCATCTTGTTATGGGGAC...GGCCATCTTTGAAGTGAGATTGAAAACAAGAACACCATTCAGGTGGGCTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAATTCAGAGTCACCTGCTaGACCCACATGTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKFRVTC*THMFLS
Trigger: GCTCAGGAACATGTGGGTCCAGCAGGTGACTCTGAA...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGAAAACGCGTCCTGTCTGAGATaGCAGCCAAGCCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GQNSTESHGNLTGQGKENASCLR*QPSQLQ
Trigger: CTGAAGCTGGCTTGGCTGCCATCTCAGACAGGACGC...GTTTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp TCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTaGGGACCAGACATAACTCACGTCCTGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SFAMAQLVYSRV*GPDITHVLQEG
Trigger: TCCTTCCTGCAGGACGTGAGTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTCAAGGACCCATCATCTaGACTTTTCTAGGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSICLPHFCEEGNRILKLQGPII*TFLGKL
Trigger: CAACTTGCCTAGAAAAGTTCAGATGATGGGTCCTTG...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR TCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGCTTTTCAGGCAGTTATaGAAAGAAACTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLLFRQL*KETLTW
Trigger: CCAGGTCAGAGTTTCTTTTCATAACTGCCTGAAAAG...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGAGGGGAACAGAATCTTaGAGCTTGCAAAATCGATTC +
Preference number: 4 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLRGTES*SLQNRF
Trigger: GAATCGATTTTGCAAGCTTCAAGATTCTGTTCCCCT...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACAGGAGGTCAGGGCTCTaGTGCTACTCTTCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: FICNGSASLLKGFGTRHNRRSGL*CYSSVC
Trigger: ACAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCT...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTCAAAGCAGGGCCCTATaGAATAGATACACAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEAQSRAL*NRYTVQ
Trigger: TTGAACTGTGTATCTATTTCATAGGGCCCTGCTTTG...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR GCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACTTCACACGGGGAGCATaGCATGATGGTCTCTATGCA +
Preference number: 4 (lower is better)
Translates to: FICNGSASLLKGFGTRHNFTRGA*HDGLYA
Trigger: TGCATAGAGACCATCATGGCATGCTCCCCGTGTGAA...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp CCAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGCAGAATCTTGAAGCTTaGAAAATCGATTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PGLPSNPEYLPSSLLRRGQNLEA*KIDSGK
Trigger: TTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG...CCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGTGCCTTCCTCACTTCTaGGAAGAGGGGAACAGAATC +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQCLPHF*EEGNRI
Trigger: GATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCA...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp GCAAGCAAAGCAGGGCCCTATGAAATAGATACACAGTTCAAGGACCCATCATCTCAAACCCTGAGTATTTaGCTTCCTCACTTCTGCGAA +
Preference number: 4 (lower is better)
Translates to: ASKAGPYEIDTQFKDPSSQTLSI*LPHFCE
Trigger: TTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTG...AGATGATGGGTCCTTGAACTGTGTATCTATTTCATAGGGCCCTGCTTTGCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR GCA 90 bp TGGGGGTCCAAGCCAAAGGCTCCCTGGCCTTTGTGTATTATGCATCCCAAAGAAATCTGTACCTTCATTTaGAATGGCTCAGCTAGTTTA +
Preference number: 4 (lower is better)
Translates to: WGSKPKAPWPLCIMHPKEICTFI*NGSASL
Trigger: TAAACTAGCTGAGCCATTGCAAATGAAGGTACAGAT...TTCTTTGGGATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTTGGACCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR GCA 90 bp AACTCAAACTTTAAAAGTTTCAATAGCTCCCTGGGGGTCCAAGCCAAAGGCTCCCATATTTCCCTCCCATaGCTTCAGCAGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: NSNFKSFNSSLGVQAKGSHISLP*LQQCER
Trigger: TCTTTCACACTGCTGAAGGCATGGGAGGGAAATATG...GGAGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAACTTTTAAAGTTTGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAATCATTGGTGCTCTGCTaGCGGACGCTGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QRGQNSTESHGNLTGQGKSLVLC*RTLTLH
Trigger: ATGGAGAGTCAGCGTCCGCCAGCAGAGCACCAATGA...TTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAATTACTGTTACGTTTGTaGAGTAGGAAAAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGELLLRL*SRKKCP
Trigger: TGGACACTTTTTCCTACTCCACAAACGTAACAGTAA...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000561680.5
CDS-3UTR CCA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAATGGAAGGGTGTGTTCTaGTGCAAATTCAAGTATTTT +
Preference number: 4 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGEWKGVF*CKFKYF
Trigger: AAAATACTTGAATTTGCACCAGAACACACCCTTCCA...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGATGCTGTCCTTTTCTaGGGAATGAGACGCCACATG +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQDAVLF*GMRRHM
Trigger: CATGTGGCGTCTCATTCCCCAGAAAAGGACAGCATC...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TTTTGGGGGCCAAGTAACATGATTCCCAGCAGGAGATTTCTGATAAAGCTCAGGGTCACCTCCCTCGGATaGCTGTTTACTTCAAATCAA +
Preference number: 4 (lower is better)
Translates to: FWGPSNMIPSRRFLIKLRVTSLG*LFTSNQ
Trigger: TTGATTTGAAGTAAACAGCCATCCGAGGGAGGTGAC...CCTGAGCTTTATCAGAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TACCAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAGGAAGATGTGTATTaGGGCTGTGCAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YQRGQNSTESHGNLTGQGKEDVY*GCAGCH
Trigger: GTGGCAGCCTGCACAGCCCCAATACACATCTTCCTT...CCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CTATTCCCTCCAGAACTTTCGTCACCACGTGGTCTATACATGATGACATGTGCAATGACAGTCAGGCAGTaGCACAAAGACTTCATGACT +
Preference number: 4 (lower is better)
Translates to: LFPPELSSPRGLYMMTCAMTVRQ*HKDFMT
Trigger: AGTCATGAAGTCTTTGTGCCACTGCCTGACTGTCAT...TGCACATGTCATCATGTATAGACCACGTGGTGACGAAAGTTCTGGAGGGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGTCTGCCATGGGTTCCTaGACCCCTACAAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: RILKLAKSILEKAGKQSRSAMGS*TPTNFN
Trigger: GTTGAAATTTGTAGGGGTTCAGGAACCCATGGCAGA...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTTACTACTTAGCCATCTaGCTTGACTTCCTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVYYLAI*LDFLGY
Trigger: ATAACCAAGGAAGTCAAGTCAGATGGCTAAGTAGTA...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTAACCCTTTCCCAAAATaGACTTTTACCAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEANPFPK*TFTKED
Trigger: GTCCTCTTTGGTAAAAGTTCATTTTGGGAAAGGGTT...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGAAAACGGGGGCCAAGTAACATaGTTCCCAGCAGGAGATTTC +
Preference number: 4 (lower is better)
Translates to: GQNSTESHGNLTGQGKENGGQVT*FPAGDF
Trigger: GAAATCTCCTGCTGGGAATCATGTTACTTGGCCCCC...GTTTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTTGCCCCAAACCAAACTaGTATTGGTCCCTATTGAAA +
Preference number: 4 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLCPKPN*YWSLLK
Trigger: TTTCAATAGGGACCAATATCAGTTTGGTTTGGGGCA...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCACAGAATGTTTTCAACTaGGTCACGAAGCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSQNVFN*VTKLSQ
Trigger: CTGGGACAGCTTCGTGACTCAGTTGAAAACATTCTG...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATACAGTTCTTGTGACTTaGATGATATCTGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSNPEYLPSSLLRRGEQNTVLVT*MISAEK
Trigger: CTTCTCAGCAGATATCATTCAAGTCACAAGAACTGT...ATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGTGGGGGATCCTCATGTaGAGGTTGAGACTGAACATA +
Preference number: 4 (lower is better)
Translates to: RILKLAKSILEKAGKQSRWGILM*RLRLNI
Trigger: TATGTTCAGTCTCAACCTGCACATGAGGATCCCCCA...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAACACTGTGAGCTCAGATaGTGTCCTTTTCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKHCELR*CPFLGN
Trigger: ATTCCCCAGAAAAGGACAGCATCTGAGCTCACAGTG...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAAGCTTCAGAGTCACCTaGTGGACCCACATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QRGQNSTESHGNLTGQGKSFRVT*WTHMFL
Trigger: CAGGAACATGTGGGTCCAGCAGGTGACTCTGAAGCT...TTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TACCAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGCTTCTGAAACATGGGTaGAAGGGTGTGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: YQRGQNSTESHGNLTGQGLLKHG*KGVFWC
Trigger: GCACCAGAACACACCCTTCCACCCATGTTTCAGAAG...CCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp GGCGTCTTCATATTCACCTTGGATAACCCTATTCCCTCCAGAACTTTCGTCACCTCTTCATATTCACCTTaGATAACCCTATTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVFIFTLDNPIPSRTFVTSSYSP*ITLFPP
Trigger: TGGAGGGAATAGGGTTATCCAAGGTGAATATGAAGA...GGTGACGAAAGTTCTGGAGGGAATAGGGTTATCCAAGGTGAATATGAAGACGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp AGCAAATGGGCAAGTGCTTTGGCTGGTGGAGTAGGCTaGTTTCTTTCATGGCTTTTACCTGAGAAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SKWASALAGGVG*FLSWLLPEKVK
Trigger: TTTTACCTTCTCAGGTAAAAGCCATGAAAGAAACAAGCCTACTCCACCAGCCAAAGCACTTGCCCATTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTGCACCAGAGGTGAAGTaGTTATTTGCCTTAAAATAT +
Preference number: 4 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVAPEVK*LFALKY
Trigger: ATATTTTAAGGCAAATAATCACTTCACCTCTGGTGC...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTCTTAGCCATCTGACTTaGCTTCCTTGGTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: LSICLPHFCEEGNRILKLLSHLT*LPWLSN
Trigger: ATTTGATAACCAAGGAAGTCAAGTCAGATGGCTAAG...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp CAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAAGATTCCAGTTGATCTaGGGGATCCTCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRGQNSTESHGNLTGQGKRFQLI*GILMCR
Trigger: CCTGCACATGAGGATCCCCCAGATCAACTGGAATCT...TTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp GGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGAAAACTCTGCTCCGGCTCTATaGTTTAAAGCAGCCAGTACG +
Preference number: 4 (lower is better)
Translates to: GQNSTESHGNLTGQGKENSAPAL*FKAAST
Trigger: CGTACTGGCTGCTTTAAACCATAGAGCCGGAGCAGA...GTTTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CCA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGTTAGTGTTTCTGCCATaGGTTCCTGAACCCCTACAA +
Preference number: 4 (lower is better)
Translates to: RILKLAKSILEKAGKQSRLVFLP*VPEPLQ
Trigger: TTGTAGGGGTTCAGGAACCCATGGCAGAAACACTAA...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CCA 90 bp GCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGACTGTAATCCCTCTTAAAACTACTGCATCATaGGGACTCACTGAACTCATT +
Preference number: 4 (lower is better)
Translates to: ALCGANKYLQPFMTVIPLKTTAS*GLTELI
Trigger: AATGAGTTCAGTGAGTCCCCATGATGCAGTAGTTTT...AAGAGGGATTACAGTCATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CAACAAGCCCACCTGAATGGTGTTCTTGTTTTCAATCTCACTTCAAAGATGGCCAAGGCTGAGCCTTTGTaGCCCTATTTTAAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: QQAHLNGVLVFNLTSKMAKAEPL*PYFKRN
Trigger: GTTCCTTTTAAAATAGGGCCACAAAGGCTCAGCCTT...GGCCATCTTTGAAGTGAGATTGAAAACAAGAACACCATTCAGGTGGGCTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp CAGTACGCTGCTAAAGCTGTCAACATTTGTCAGCACTaGATCTTGGGGATTTCTCCATGTTACTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: QYAAKAVNICQH*ILGISPCYCKI
Trigger: GATTTTGCAGTAACATGGAGAAATCCCCAAGATCAAGTGCTGACAAATGTTGACAGCTTTAGCAGCGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGCTTTTCAGGCAGTTATaGAAAGAAACTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: RILKLAKSILEKAGKQSRLFRQL*KETLTW
Trigger: CCAGGTCAGAGTTTCTTTTCATAACTGCCTGAAAAG...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGAAAACTCTGCCATGGGTTCCTaGACCCCTACAAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: GQNSTESHGNLTGQGKENSAMGS*TPTNFN
Trigger: GTTGAAATTTGTAGGGGTTCAGGAACCCATGGCAGA...GTTTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTGCACCAGAGGTGAAGTaGTTATTTGCCTTAAAATAT +
Preference number: 4 (lower is better)
Translates to: LSICLPHFCEEGNRILKLAPEVK*LFALKY
Trigger: ATATTTTAAGGCAAATAATCACTTCACCTCTGGTGC...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp AAAAATGGGATACTTCCTACTGGGTGTCAGCACTGTCATCCTAAGGCAACTCAGAATAATTACATATTCTaGCCCTTCAGAAGGACACCA +
Preference number: 4 (lower is better)
Translates to: KNGILPTGCQHCHPKATQNNYIF*PFRRTP
Trigger: TGGTGTCCTTCTGAAGGGTCAGAATATGTAATTATT...CTGAGTTGCCTTAGGATGACAGTGCTGACACCCAGTAGGAAGTATCCCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp CAACAAGCCCACCTGAATGGTGTTCTTGTTTTCAATCTCACTTCAAAGATGGCCCTTAGCCATCTGACTTaGCTTCCTTGGTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: QQAHLNGVLVFNLTSKMALSHLT*LPWLSN
Trigger: ATTTGATAACCAAGGAAGTCAAGTCAGATGGCTAAG...GGCCATCTTTGAAGTGAGATTGAAAACAAGAACACCATTCAGGTGGGCTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp GGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGAAAACGGCAACAAGCCCACCTaGATGGTGTTCTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GQNSTESHGNLTGQGKENGNKPT*MVFLFS
Trigger: TGAAAACAAGAACACCATTCAGGTGGGCTTGTTGCC...GTTTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAACTTTTTCCCCTTTCTaGTACCTGTTTAACGTCATT +
Preference number: 4 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLETFSPF*YLFNVI
Trigger: AATGACGTTAAACAGGTATCAGAAAGGGGAAAAAGT...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTTTGAATGATATCTGCTaGGAAGAGAAGAAACACAAG +
Preference number: 4 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLLNDIC*EEKKHK
Trigger: CTTGTGTTTCTTCTCTTCTCAGCAGATATCATTCAA...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTCAGAATCTTGAAGCTTaGAAAATCGATTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEAQNLEA*KIDSGK
Trigger: TTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCAATTCACGTACATGAGTaGACAAAGGTGTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSIHVHE*TKVLEL
Trigger: AAGCTCCAACACCTTTGTGCACTCATGTACGTGAAT...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTTTACTGTTACGTTTGTaGAGTAGGAAAAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLLLLRL*SRKKCP
Trigger: TGGACACTTTTTCCTACTCCACAAACGTAACAGTAA...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000561680.5
3UTR CAA 72 bp TCGCTCAGCCTTCAAATGCCCCAAACCAAACTGATATaGGTCCCTATTGAAACTATTAAACGCAAAAACGCT +
Preference number: 4 (lower is better)
Translates to: SLSLQMPQTKLI*VPIETIKRKNA
Trigger: AGCGTTTTTGCGTTTAATAGTTTCAATAGGGACCAATATCAGTTTGGTTTGGGGCATTTGAAGGCTGAGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGAATCACATGGAAATCTaGCAGGACAAGGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQNHMEI*QDKGKK
Trigger: TTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATT...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp CTATTCCCTCCAGAACTTTCGTCACCACGTGGTCTATACATGATGACATGTGCAAGTCTATCACGAAGATaGAAATTAACTCCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: LFPPELSSPRGLYMMTCASLSRR*KLTPKS
Trigger: TGACTTAGGAGTTAATTTGCATCTTCGTGATAGACT...TGCACATGTCATCATGTATAGACCACGTGGTGACGAAAGTTCTGGAGGGAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CCA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGACAAGCCCACCTGAATaGTGTTCTTGTTTTCAATCT +
Preference number: 4 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQTSPPE*CSCFQS
Trigger: AGATTGAAAACAAGAACACCATTCAGGTGGGCTTGT...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACAATAATTACATATTCTaGCCCTTCAGAAGGACACCA +
Preference number: 4 (lower is better)
Translates to: FICNGSASLLKGFGTRHNNNYIF*PFRRTP
Trigger: TGGTGTCCTTCTGAAGGGTCAGAATATGTAATTATT...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR TCA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCAAGGACAAAATTCAACTaGATCACATGGAAATCTGAC +
Preference number: 4 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSRTKFN*ITWKSD
Trigger: GTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCT...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp TACCAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGTGCCACTCACTTGCATaGAGAAGAATTAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: YQRGQNSTESHGNLTGQGCHSLA*RRIKQN
Trigger: GTTCTGTTTAATTCTTCTTCATGCAAGTGAGTGGCA...CCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCAGTTGTGTCTTTAAACTaGCGAAATGAAAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSVVSLN*RNERDL
Trigger: CAAGTCTCTTTCATTTCGGCAGTTTAAAGACACAAC...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp TTTAAAAGGAACTCTCAAAGAGAGATAAGCCCAATTTaGACTTTGCAAACACACTCAACAGACCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: FKRNSQREISPI*TLQTHSTDLTG
Trigger: GCCTGTCAGGTCTGTTGAGTGTGTTTGCAAAGTCAAAATTGGGCTTATCTCTCTTTGAGAGTTCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp TTAACTCCTAAGTCACTCTCTGGCGTGTCATCCTTTTaGGTCATTCATCTGCATTTAGTTTCAGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: LTPKSLSGVSSF*VIHLHLVSVTS
Trigger: TGAAGTCACTGAAACTAAATGCAGATGAATGACCAAAAAGGATGACACGCCAGAGAGTGACTTAGGAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
3UTR CAA 72 bp CAGGCAGTGGCACAAAGACTTCATGACTGTTTTGTTTaGAACACAGATGAGACAATAGGAACCCTTAAATCA +
Preference number: 4 (lower is better)
Translates to: QAVAQRLHDCFV*NTDETIGTLKS
Trigger: TGATTTAAGGGTTCCTATTGTCTCATCTGTGTTCAAAACAAAACAGTCATGAAGTCTTTGTGCCACTGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGCAGAATCTTGAAGCTTaGAAAATCGATTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RILKLAKSILEKAGKQSRQNLEA*KIDSGK
Trigger: TTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR GCA 90 bp CAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAATTTCTCCATGTTACTaGAAAATCTTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: QRGQNSTESHGNLTGQGKISPCY*KIFLPQ
Trigger: CTGTGGCAGGAAGATTTTGCAGTAACATGGAGAAAT...TTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR GCA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAAATACATGATGACATGTaGAACCACACATTACATCAA +
Preference number: 4 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKIHDDM*NHTLHQ
Trigger: TTGATGTAATGTGTGGTTGCACATGTCATCATGTAT...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR TCA 90 bp CAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAAGGACAAAATTCAACTaGATCACATGGAAATCTGAC +
Preference number: 4 (lower is better)
Translates to: QRGQNSTESHGNLTGQGKRTKFN*ITWKSD
Trigger: GTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCT...TTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS CCA 90 bp AGGCCGGCCAGCCCGCGGCGCTGGCTCACCGGCTCGGTGGTGGGCTaGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTGCTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: RPASPRRWLTGSVVG*YGLLAPEIMEVLEA
Trigger: GGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGGTGAGCCAGCGCCGCGGGCTGGCCGGCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS GCA 90 bp GCCCGCGGCGCTGGCTCACCGGCTCGGTGGTGGGCTGGTACGGGCTaGTGGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: ARGAGSPARWWAGTG*WRPRSWRCSRPRPR
Trigger: TCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGGTGAGCCAGCGCCGCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS CCA 90 bp CGCGGCGCTGGCTCACCGGCTCGGTGGTGGGCTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGCCCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: RGAGSPARWWAGTGC*RPRSWRCSRPRPRS
Trigger: GCTTCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGGTGAGCCAGCGCCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS GCA 90 bp CGGTGGTGGGCTGGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTaGTCGAGGCCTCGCCCTCGAAGCCGTCCAGCTCCTCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RWWAGTGCWRPRSWR*SRPRPRSRPAPRRS
Trigger: GGAGCGGCGAGGAGCTGGACGGCTTCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000563952.1
CDS CCA 90 bp CAATCAGGGCCAAGATCGGCTCGGTGGTGGGCTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGCCCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: QSGPRSARWWAGTGC*RPRSWRCSRPRPRS
Trigger: GCTTCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGATCTTGGCCCTGATTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563952.1
CDS GCA 90 bp ATGCAATCAGGGCCAAGATCGGCTCGGTGGTGGGCTGGTACGGGCTaGTGGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: MQSGPRSARWWAGTG*WRPRSWRCSRPRPR
Trigger: TCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGATCTTGGCCCTGATTGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563952.1
CDS-3UTR CAA 90 bp CAGGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGATCACTTGGGCGACCTaGAGGCGGCCGAGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: QGKEPDTGLSPFYTQRQEITWAT*RRPSAP
Trigger: CGGCGCGCTCGGCCGCCTCAAGGTCGCCCAAGTGAT...CTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp GCAGTGACGCCGGCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAGGGCAATGTGAGGCTTaGCCTGCTGTCGGGGACAAA +
Preference number: 5 (lower is better)
Translates to: AVTPAAPQPQTLRNVGLPGQCEA*PAVGDK
Trigger: TTTGTCCCCGACAGCAGGCAAAGCCTCACATTGCCC...TGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGCCGGCGTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp ACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCTCTGTCAGATTCCAGTaGATCTGGGGGATCCTCATG +
Preference number: 5 (lower is better)
Translates to: TWASQLHRGPAHWATRETSVRFQ*IWGILM
Trigger: CATGAGGATCCCCCAGATCAACTGGAATCTGACAGA...GGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CAA 90 bp AGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAGCGCTGAGTCCAGTGTaGACCAAATCTGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: RNVGLPTPPRTRPLGHSGALSPV*TKSVRF
Trigger: GAATCTGACAGATTTGGTCAACACTGGACTCAGCGC...TCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CAA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCTACAGAGTGAAAGAGTaGGGAACAGGCAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRYRVKE*GTGSPL
Trigger: AAGGGGGCTGCCTGTTCCCAACTCTTTCACTCTGTA...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCATCGTACTGAAGGTGTaGGTGCAGGAAGCTAACCCC +
Preference number: 5 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRIVLKV*VQEANP
Trigger: GGGGTTAGCTTCCTGCACCAACACCTTCAGTACGAT...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp AGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAGGTTCCACCAAATGCTaGAGGGTTTCAGCTGTACAG +
Preference number: 5 (lower is better)
Translates to: RNVGLPTPPRTRPLGHSGGSTKC*RVSAVQ
Trigger: CTGTACAGCTGAAACCCTCAAGCATTTGGTGGAACC...TCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp GCAGTGACGCCGGCTGCTCCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCACACATAAACCTAAGTTaGCCCAACGGGCATCGCCTC +
Preference number: 5 (lower is better)
Translates to: AVTPAAPQPQTLRNVGLPHINLS*PNGHRL
Trigger: GAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG...TGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGGAGCAGCCGGCGTCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp ACGTGGGCCTCCCAACTCCACCGCGGACCCGCCCACTGGGCCACTCGGGAAACCCAAGGGAAAGAAAACTaGACTGAGAGACAGGCACGA +
Preference number: 5 (lower is better)
Translates to: TWASQLHRGPAHWATRETQGKEN*TERQAR
Trigger: TCGTGCCTGTCTCTCAGTCAAGTTTTCTTTCCCTTG...GGTTTCCCGAGTGGCCCAGTGGGCGGGTCCGCGGTGGAGTTGGGAGGCCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CAA 90 bp CCACAGCCCCAAACGCTGAGGAACGTGGGCCTCCCAACTCCACCGCGGACCCGCTCAAACCCTGAGTATTaGCCTTCCTCACTTCTGCGA +
Preference number: 5 (lower is better)
Translates to: PQPQTLRNVGLPTPPRTRSNPEY*PSSLLR
Trigger: TCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA...GCGGGTCCGCGGTGGAGTTGGGAGGCCCACGTTCCTCAGCGTTTGGGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp AGGCAGCCCCCTTTGGGCCTGGGTCAGCCTACGAGTCCATCCCAGGTGTCCTGCTGGCACCCACTAGGGTaGTTCAGGTCTCATTCACTG +
Preference number: 5 (lower is better)
Translates to: RQPPLGLGQPTSPSQVSCWHPLG*FRSHSL
Trigger: CAGTGAATGAGACCTGAACAACCCTAGTGGGTGCCA...GCAGGACACCTGGGATGGACTCGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGGCAGCCCCCTTaGGGCCTGGGTCAGCCTACG +
Preference number: 5 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGNRQPP*GLGQPT
Trigger: CGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGTT...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp CATCTGTTCTTCCCAGCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGATCACTTGGGCGACCTaGAGGCGGCCGAGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: HLFFPALCGANKYLQPFMITWAT*RRPSAP
Trigger: CGGCGCGCTCGGCCGCCTCAAGGTCGCCCAAGTGAT...CATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGCTGGGAAGAACAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp GCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGTACGTGTCTGTGTCTaGGTGTCATCTAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AVAGRPCLCRTLALILEGVRVCV*VSSSSS
Trigger: TGAGGAGCTAGATGACACCAAGACACAGACACGTAC...CCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS TCA 90 bp CCGTGCGGGCTCGGATGTAGTCATTGGTGCTCTGCTGGCGGACGCTaGCTCTCCATTTCTGCACTGCCAGGAATGTGTTCACTGCATATG +
Preference number: 5 (lower is better)
Translates to: PCGLGCSHWCSAGGR*LSISALPGMCSLHM
Trigger: CATATGCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGAGCACCAATGACTACATCCGAGCCCGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS GCA 90 bp GTCATTGGTGCTCTGCTGGCGGACGCTGACTCTCCATTTCTGCACTaGCAGGAATGTGTTCACTGCATATGCCGCAGTCGCCAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: VIGALLADADSPFLH*QECVHCICRSRQEA
Trigger: GGCTTCTTGGCGACTGCGGCATATGCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGAGCACCAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS-3UTR CAA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATCAGGGCCAAGATCACTaGGGCGACCTTGAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHQGQDH*GDLEAA
Trigger: GGCCGCCTCAAGGTCGCCCAAGTGATCTTGGCCCTG...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp ATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGGCCCAGGCCAGAGAATACACATAAACCTAAGTTaGCCCAACGGGCATCGCCTC +
Preference number: 5 (lower is better)
Translates to: MPLQDARTDSGRGPGQRIHINLS*PNGHRL
Trigger: GAGGCGATGCCCGTTGGGCAAACTTAGGTTTATGTG...TATTCTCTGGCCTGGGCCCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTAAATGGGCAAGTGCTTaGGCTGGTGGAGTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGKWASA*AGGVGL
Trigger: CAAGCCTACTCCACCAGCCAAAGCACTTGCCCATTT...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAAAGAGCTGGGCCGGACTaGCCCATGCTGGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGERAGPD*PMLASA
Trigger: AGCTGAAGCCAGCATGGGCAAGTCCGGCCCAGCTCT...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTCAGGGCCAAGATCACTaGGGCGACCTTGAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEAQGQDH*GDLEAA
Trigger: GGCCGCCTCAAGGTCGCCCAAGTGATCTTGGCCCTG...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGTACAGAGTGAAAGAGTaGGGAACAGGCAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRYRVKE*GTGSPL
Trigger: AAGGGGGCTGCCTGTTCCCAACTCTTTCACTCTGTA...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp CCAGGCCAGAGAATACACTTGGGCTCAGTTCACCAGCCCAAACCACAGGGGAAGGCGCTGAGTCCAGTGTaGACCAAATCTGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: PGQRIHLGSVHQPKPQGKALSPV*TKSVRF
Trigger: GAATCTGACAGATTTGGTCAACACTGGACTCAGCGC...CTTCCCCTGTGGTTTGGGCTGGTGAACTGAGCCCAAGTGTATTCTCTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTAAGGCTCCCTGGCCTTaGTGTATTATGCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGKAPWP*CIMHPK
Trigger: TTTGGGATGCATAATACACAAAGGCCAGGGAGCCTT...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTAACAGGCAGCCCCCTTaGGGCCTGGGTCAGCCTACG +
Preference number: 5 (lower is better)
Translates to: LSICLPHFCEEGNRILKLNRQPP*GLGQPT
Trigger: CGTAGGCTGACCCAGGCCCAAAGGGGGCTGCCTGTT...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGGTACGTGTCTGTGTCTaGGTGTCATCTAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRVRVCV*VSSSSS
Trigger: TGAGGAGCTAGATGACACCAAGACACAGACACGTAC...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTTCCATACATACAGACTaGAACCCAAAAGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGSIHTD*NPKARP
Trigger: TGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGA...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp GCAGTGGCAGGAAGGCCATGCCTCTGCAGGACGCTCGCACTGATTCTGGAAGGGAGCCCAATTTTGACTTaGCAAACACACTCAACAGAC +
Preference number: 5 (lower is better)
Translates to: AVAGRPCLCRTLALILEGSPILT*QTHSTD
Trigger: GTCTGTTGAGTGTGTTTGCAAAGTCAAAATTGGGCT...CCCTTCCAGAATCAGTGCGAGCGTCCTGCAGAGGCATGGCCTTCCTGCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS GCA 90 bp GCGGACGCTGACTCTCCATTTCTGCACTGCCAGGAATGTGTTCACTaGATATGCCGCAGTCGCCAAGAAGCCAAATATCACGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: ADADSPFLHCQECVH*ICRSRQEAKYHGSN
Trigger: ATTGCTGCCGTGATATTTGGCTTCTTGGCGACTGCGGCATATGCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGAGTCAGCGTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS-3UTR CAA 90 bp GGGGAAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTATCCTCATGTGCAGGTaGAGACTGAACATAATCAGC +
Preference number: 5 (lower is better)
Translates to: GEGAGHRPLTILHPKTGGILMCR*RLNIIS
Trigger: GCTGATTATGTTCAGTCTCAACCTGCACATGAGGAT...ACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp GTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGCAAACAGCCTGTTTaGTTCAGGCCTGAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: VSLQTLSICLPHFCEEGNSKQPV*FRPEAW
Trigger: CCAGGCTTCAGGCCTGAACAAAACAGGCTGTTTGCT...GTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp AAGGAGCCGGACACCGGCCTCTCACCATTTTACACCCAAAGACAGGAGGTCAGGGCTGGTGGAGTAGGCTaGTTTCTTTCATGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: KEPDTGLSPFYTQRQEVRAGGVG*FLSWLL
Trigger: TAAAAGCCATGAAAGAAACAAGCCTACTCCACCAGC...CCTGACCTCCTGTCTTTGGGTGTAAAATGGTGAGAGGCCGGTGTCCGGCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp TACGCCTGGGCCACACGCAGGACATGGCACCCACTAGGGTTGTTCAGGTCTCATCACAGTAAGTGCTTTTaGGTGAGGGCTAAACACAAA +
Preference number: 5 (lower is better)
Translates to: YAWATRRTWHPLGLFRSHHSKCF*VRAKHK
Trigger: TTTGTGTTTAGCCCTCACCAAAAAGCACTTACTGTG...ATGAGACCTGAACAACCCTAGTGGGTGCCATGTCCTGCGTGTGGCCCAGGCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS GCA 90 bp GCTGACTCTCCATTTCTGCACTGCCAGGAATGTGTTCACTGCATATaGCGCAGTCGCCAAGAAGCCAAATATCACGGCAGCAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: ADSPFLHCQECVHCI*RSRQEAKYHGSNFC
Trigger: GCAGAAATTGCTGCCGTGATATTTGGCTTCTTGGCGACTGCGGCATATGCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGAGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS-3UTR CAA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATAGCAAACAGCCTGTTTaGTTCAGGCCTGAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHSKQPV*FRPEAW
Trigger: CCAGGCTTCAGGCCTGAACAAAACAGGCTGTTTGCT...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp CTCAGAGTCAAAGGAAGCCTGTGCTTCAGGGCAGGTAAGACCTCAAGTGGACCTCAAGGGAAAGAAAACTaGACTGAGAGACAGGCACGA +
Preference number: 5 (lower is better)
Translates to: LRVKGSLCFRAGKTSSGPQGKEN*TERQAR
Trigger: TCGTGCCTGTCTCTCAGTCAAGTTTTCTTTCCCTTG...AGGTCCACTTGAGGTCTTACCTGCCCTGAAGCACAGGCTTCCTTTGACTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CAA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGCAGCCTACCAAGCTGTaGGGCCTGGACGTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQQPTKL*GLDVGA
Trigger: AGCACCCACGTCCAGGCCCAACAGCTTGGTAGGCTG...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp TCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAGCGCTGAGTCCAGTGTaGACCAAATCTGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: SLQTLSICLPHFCEEGNRALSPV*TKSVRF
Trigger: GAATCTGACAGATTTGGTCAACACTGGACTCAGCGC...TCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CAA 90 bp CTAAGGTCGCTCAGCCTTCAAATGCCCCAAACCAAACTGATATTGGTCCCTATTAAAGGTCACCCTTCCTaGAGTCAGAGGTCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LRSLSLQMPQTKLILVPIKGHPS*SQRSLG
Trigger: TCCCAGGGACCTCTGACTCAAGGAAGGGTGACCTTT...AATAGGGACCAATATCAGTTTGGTTTGGGGCATTTGAAGGCTGAGCGACCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp CCAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGTCTTCATATTCACCTaGGATAACCCTATTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PGLPSNPEYLPSSLLRRGVFIFT*DNPIPS
Trigger: GGAGGGAATAGGGTTATCCAAGGTGAATATGAAGAC...CCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp GAAGGAGAAGCAAAAGGAGCCGGTGAAGAGTACGTGTCTGTGTCTTGGTGTCATTCAAACCCTGAGTATTaGCCTTCCTCACTTCTGCGA +
Preference number: 5 (lower is better)
Translates to: EGEAKGAGEEYVSVSWCHSNPEY*PSSLLR
Trigger: TCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA...ATGACACCAAGACACAGACACGTACTCTTCACCGGCTCCTTTTGCTTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGGGGCAATGTGAGGCTTaGCCTGCTGTCGGGGACAAA +
Preference number: 5 (lower is better)
Translates to: RILKLAKSILEKAGKQSRGQCEA*PAVGDK
Trigger: TTTGTCCCCGACAGCAGGCAAAGCCTCACATTGCCC...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp CAGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGCCCAGCCCAGCAGTGTaGCCTGATCAACACTGTGAG +
Preference number: 5 (lower is better)
Translates to: QNLEACKIDSGKSRQAKQPSPAV*PDQHCE
Trigger: CTCACAGTGTTGATCAGGCAACACTGCTGGGCTGGG...CTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS GCA 90 bp TTGACCAAATCTGTCAGATTCCAGTTGATCTGGGGGATCCTCATGTaGAGGTTGAGACTGAACATAATCAGCAAGACGCCAGTCACCACA +
Preference number: 5 (lower is better)
Translates to: LTKSVRFQLIWGILM*RLRLNIISKTPVTT
Trigger: TGTGGTGACTGGCGTCTTGCTGATTATGTTCAGTCTCAACCTGCACATGAGGATCCCCCAGATCAACTGGAATCTGACAGATTTGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS-3UTR CAA 90 bp AACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAATCTGTCAGATTCCAGTaGATCTGGGGGATCCTCATG +
Preference number: 5 (lower is better)
Translates to: NPEYLPSSLLRRGEQNLESVRFQ*IWGILM
Trigger: CATGAGGATCCCCCAGATCAACTGGAATCTGACAGA...TTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CAA 90 bp CCAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGTCCTTACTGTTACGTTaGTGGAGTAGGAAAAAGTGT +
Preference number: 5 (lower is better)
Translates to: PGLPSNPEYLPSSLLRRGSLLLR*WSRKKC
Trigger: ACACTTTTTCCTACTCCACAAACGTAACAGTAAGGA...CCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000561680.5
CDS-3UTR CAA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAAACTTTTCTAGGCAAGTaGCCAGTGATTCAAACTCAG +
Preference number: 5 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGETFLGK*PVIQTQ
Trigger: CTGAGTTTGAATCACTGGCAACTTGCCTAGAAAAGT...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CAA 90 bp AAGCAGGCAAGCAAAGCAGGGCCCTATGAAATAGATACACAGTTCAAGGACCCATCAAACCCTGAGTATTaGCCTTCCTCACTTCTGCGA +
Preference number: 5 (lower is better)
Translates to: KQASKAGPYEIDTQFKDPSNPEY*PSSLLR
Trigger: TCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA...TGGGTCCTTGAACTGTGTATCTATTTCATAGGGCCCTGCTTTGCTTGCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR CAA 90 bp TCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGATGTCAGCACTTGATCTaGGGGATTTCTCCATGTTAC +
Preference number: 5 (lower is better)
Translates to: SLQTLSICLPHFCEEGNRCQHLI*GISPCY
Trigger: GTAACATGGAGAAATCCCCAAGATCAAGTGCTGACA...TCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp TGGGGGTCCAAGCCAAAGGCTCCCTGGCCTTTGTGTATTATGCATCCCAAAGAAAACATTTGTCAGCACTaGATCTTGGGGATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: WGSKPKAPWPLCIMHPKENICQH*ILGISP
Trigger: TGGAGAAATCCCCAAGATCAAGTGCTGACAAATGTT...TTCTTTGGGATGCATAATACACAAAGGCCAGGGAGCCTTTGGCTTGGACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp CCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTGCAAGGCTGAGCCTTaGTGGCCCTATTTTAAAAGG +
Preference number: 5 (lower is better)
Translates to: PEYLPSSLLRRGEQNLEACKAEP*WPYFKR
Trigger: CCTTTTAAAATAGGGCCACAAAGGCTCAGCCTTGCA...AGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCAGAGTGCACAAAGGTGTaGGAGCTTGGTCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSECTKV*ELGLLR
Trigger: CCTGAGGAGACCAAGCTCCAACACCTTTGTGCACTC...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp TTCTGGAAAAAGCAGGCAAGCAAAGCAGGGCCCTATGAAATAGATACACAGTTCGCGCTGAGTCCAGTGTaGACCAAATCTGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: FWKKQASKAGPYEIDTQFALSPV*TKSVRF
Trigger: GAATCTGACAGATTTGGTCAACACTGGACTCAGCGC...GAACTGTGTATCTATTTCATAGGGCCCTGCTTTGCTTGCCTGCTTTTTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR CAA 90 bp TCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAACTTTTCTAGGCAAGTaGCCAGTGATTCAAACTCAG +
Preference number: 5 (lower is better)
Translates to: SLQTLSICLPHFCEEGNRTFLGK*PVIQTQ
Trigger: CTGAGTTTGAATCACTGGCAACTTGCCTAGAAAAGT...TCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CAA 90 bp TCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTAAGGCTCCCTGGCCTTaGTGTATTATGCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: SNPEYLPSSLLRRGEQNLKAPWP*CIMHPK
Trigger: TTTGGGATGCATAATACACAAAGGCCAGGGAGCCTT...AAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp CAGGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGACCATTATCAGAATCTaGTTTCACACCATCTCTCTT +
Preference number: 5 (lower is better)
Translates to: QVSLQTLSICLPHFCEEGTIIRI*FHTISL
Trigger: AAGAGAGATGGTGTGAAACAAGATTCTGATAATGGT...CCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGAGACTCAACACTGACTaGGAGCAGGTGGTGCCTAAG +
Preference number: 5 (lower is better)
Translates to: RILKLAKSILEKAGKQSRRLNTD*EQVVPK
Trigger: CTTAGGCACCACCTGCTCCAAGTCAGTGTTGAGTCT...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp TACCAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGCAAGGAAGATGTGTATaGGGGCTGTGCAGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: YQRGQNSTESHGNLTGQGQGRCV*GLCRLP
Trigger: TGGCAGCCTGCACAGCCCCAATACACATCTTCCTTG...CCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACCAAAGGTGTTGGAGCTaGGTCTCCTCAGGCTTAACC +
Preference number: 5 (lower is better)
Translates to: FICNGSASLLKGFGTRHNQRCWS*VSSGLT
Trigger: GGTTAAGCCTGAGGAGACCAAGCTCCAACACCTTTG...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGTCTGTCAGATTCCAGTaGATCTGGGGGATCCTCATG +
Preference number: 5 (lower is better)
Translates to: RILKLAKSILEKAGKQSRSVRFQ*IWGILM
Trigger: CATGAGGATCCCCCAGATCAACTGGAATCTGACAGA...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
CDS-3UTR CAA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGGAGGGGAACAGAATCTaGAAGCTTGCAAAATCGATT +
Preference number: 5 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLEGNRI*KLAKSI
Trigger: AATCGATTTTGCAAGCTTCAAGATTCTGTTCCCCTC...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp AAGCAGGCAAGCAAAGCAGGGCCCTATGAAATAGATACACAGTTCAAGGACCCAGAGGGGAACAGAATCTaGAAGCTTGCAAAATCGATT +
Preference number: 5 (lower is better)
Translates to: KQASKAGPYEIDTQFKDPEGNRI*KLAKSI
Trigger: AATCGATTTTGCAAGCTTCAAGATTCTGTTCCCCTC...TGGGTCCTTGAACTGTGTATCTATTTCATAGGGCCCTGCTTTGCTTGCCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561680.5
CDS-3UTR CAA 90 bp AAAAATGGGATACTTCCTACTGGGTGTCAGCACTGTCATCCTAAGGCAACTCAGTGGCTTCAGCTCACATaGCCAAGGAAGATGTGTATT +
Preference number: 5 (lower is better)
Translates to: KNGILPTGCQHCHPKATQWLQLT*PRKMCI
Trigger: AATACACATCTTCCTTGGCAATGTGAGCTGAAGCCA...CTGAGTTGCCTTAGGATGACAGTGCTGACACCCAGTAGGAAGTATCCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp GGTCTCCCTTCAAACCCTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAAGATGTAACTGCAAACTaGAAGAGAGTCAGAATGTTT +
Preference number: 5 (lower is better)
Translates to: GLPSNPEYLPSSLLRRGEDVTAN*KRVRMF
Trigger: AAACATTCTGACTCTCTTCAAGTTTGCAGTTACATC...TTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAGGGTTTGAAGGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp CCATTTTACACCCAAAGACAGGAGGTCAGGGCTCTGATGCTACTCTTCTGTTTGTGCAGAATCACTAAATaGTTCAGGTGTCTCCATGCT +
Preference number: 5 (lower is better)
Translates to: PFYTQRQEVRALMLLFCLCRITK*FRCLHA
Trigger: AGCATGGAGACACCTGAACAATTTAGTGATTCTGCA...CAAACAGAAGAGTAGCATCAGAGCCCTGACCTCCTGTCTTTGGGTGTAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp CTGAGTATTTGCCTTCCTCACTTCTGCGAAGAGGGGAACAGAATCTTGAAGCTTGGAGCAGGAAGCAACTaGTTATTCTGCTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LSICLPHFCEEGNRILKLGAGSN*LFCSRE
Trigger: TTCTCTTGAGCAGAATAACAAGTTGCTTCCTGCTCC...AAGCTTCAAGATTCTGTTCCCCTCTTCGCAGAAGTGAGGAAGGCAAATACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp AACTCAAACTTTAAAAGTTTCAATAGCTCCCTGGGGGTCCAAGCCAAAGGCTCCACTTTTCTAGGCAAGTaGCCAGTGATTCAAACTCAG +
Preference number: 5 (lower is better)
Translates to: NSNFKSFNSSLGVQAKGSTFLGK*PVIQTQ
Trigger: CTGAGTTTGAATCACTGGCAACTTGCCTAGAAAAGT...GGAGCCTTTGGCTTGGACCCCCAGGGAGCTATTGAAACTTTTAAAGTTTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp CAAAGAGGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAATCTGTCAGATTCCAGTaGATCTGGGGGATCCTCATG +
Preference number: 5 (lower is better)
Translates to: QRGQNSTESHGNLTGQGKSVRFQ*IWGILM
Trigger: CATGAGGATCCCCCAGATCAACTGGAATCTGACAGA...TTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCCTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394106.7
ENST00000563952.1
CDS-3UTR CAA 90 bp CGTGTCTGTGTCTTGGTGTCATCTAGCTCCTCACAGCAAACAGCCTGTTTTGTTACCATTATCAGAATCTaGTTTCACACCATCTCTCTT +
Preference number: 5 (lower is better)
Translates to: RVCVLVSSSSSQQTACFVTIIRI*FHTISL
Trigger: AAGAGAGATGGTGTGAAACAAGATTCTGATAATGGT...AACAAAACAGGCTGTTTGCTGTGAGGAGCTAGATGACACCAAGACACAGACACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp TTCTTTGTACTGTTTGAGGTGAGCAGTGGCTCCAAACTGAGCAAGTGGTTAAAAGTTTACTCAAGGGTTTaGGGACCAGACATAACTCAC +
Preference number: 5 (lower is better)
Translates to: FFVLFEVSSGSKLSKWLKVYSRV*GPDITH
Trigger: GTGAGTTATGTCTGGTCCCAAAACCCTTGAGTAAAC...TTTTAACCACTTGCTCAGTTTGGAGCCACTGCTCACCTCAAACAGTACAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp GCTTTATGTGGGGCCAACAAGTATCTCCAGCCTTTCATGACTGTAATCCCTCTTGAGATAAGCCCAATTTaGACTTTGCAAACACACTCA +
Preference number: 5 (lower is better)
Translates to: ALCGANKYLQPFMTVIPLEISPI*TLQTHS
Trigger: TGAGTGTGTTTGCAAAGTCAAAATTGGGCTTATCTC...AAGAGGGATTACAGTCATGAAAGGCTGGAGATACTTGTTGGCCCCACATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp TTCATTTGCAATGGCTCAGCTAGTTTACTCAAGGGTTTTGGGACCAGACATAACGAGGGGAACAGAATCTaGAAGCTTGCAAAATCGATT +
Preference number: 5 (lower is better)
Translates to: FICNGSASLLKGFGTRHNEGNRI*KLAKSI
Trigger: AATCGATTTTGCAAGCTTCAAGATTCTGTTCCCCTC...GTTATGTCTGGTCCCAAAACCCTTGAGTAAACTAGCTGAGCCATTGCAAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS-3UTR CAA 90 bp GGACAAAATTCAACTGAATCACATGGAAATCTGACAGGACAAGGGAAAGAAAACTCCATACATACAGACTaGAACCCAAAAGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: GQNSTESHGNLTGQGKENSIHTD*NPKARP
Trigger: TGGCCTGGCTTTTGGGTTCAAGTCTGTATGTATGGA...GTTTTCTTTCCCTTGTCCTGTCAGATTTCCATGTGATTCAGTTGAATTTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp GCTTTTTCTGTAGACAAAAGTCACCTCCCTCGGATGGCTGTTTACTTCAAATCAGGCGTGTCATCCTTTTaGGTCATTCATCTGCATTTA +
Preference number: 5 (lower is better)
Translates to: AFSVDKSHLPRMAVYFKSGVSSF*VIHLHL
Trigger: TAAATGCAGATGAATGACCAAAAAGGATGACACGCC...TGATTTGAAGTAAACAGCCATCCGAGGGAGGTGACTTTTGTCTACAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394106.7
CDS-3UTR CAA 90 bp AGAATCTTGAAGCTTGCAAAATCGATTCTGGAAAAAGCAGGCAAGCAAAGCAGGTCCTTACTGTTACGTTaGTGGAGTAGGAAAAAGTGT +
Preference number: 5 (lower is better)
Translates to: RILKLAKSILEKAGKQSRSLLLR*WSRKKC
Trigger: ACACTTTTTCCTACTCCACAAACGTAACAGTAAGGA...CCTGCTTTGCTTGCCTGCTTTTTCCAGAATCGATTTTGCAAGCTTCAAGATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000561680.5
CDS CCA 72 bp AGCCCGCGGCGCTGGCTCACCGGCTCGGTGGTGGGCTaGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTG +
Preference number: 6 (lower is better)
Translates to: SPRRWLTGSVVG*YGLLAPEIMEV
Trigger: CACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGGTGAGCCAGCGCCGCGGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS CCA 72 bp GGCTCACCGGCTCGGTGGTGGGCTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGC +
Preference number: 6 (lower is better)
Translates to: GSPARWWAGTGC*RPRSWRCSRPR
Trigger: GCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGGTGAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS GCA 72 bp GCTGGCTCACCGGCTCGGTGGTGGGCTGGTACGGGCTaGTGGCGCCCGAGATCATGGAGGTGCTCGAGGCCT +
Preference number: 6 (lower is better)
Translates to: AGSPARWWAGTG*WRPRSWRCSRP
Trigger: AGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGGTGAGCCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS GCA 72 bp GCTGGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTaGTCGAGGCCTCGCCCTCGAAGCCGTCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: AGTGCWRPRSWR*SRPRPRSRPAP
Trigger: AGGAGCTGGACGGCTTCGAGGGCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000563952.1
CDS GCA 72 bp GGGCCAAGATCGGCTCGGTGGTGGGCTGGTACGGGCTaGTGGCGCCCGAGATCATGGAGGTGCTCGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GPRSARWWAGTG*WRPRSWRCSRP
Trigger: AGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGATCTTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563952.1
CDS CCA 72 bp CCAAGATCGGCTCGGTGGTGGGCTGGTACGGGCTGCTaGCGCCCGAGATCATGGAGGTGCTCGAGGCCTCGC +
Preference number: 6 (lower is better)
Translates to: PRSARWWAGTGC*RPRSWRCSRPR
Trigger: GCGAGGCCTCGAGCACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGATCTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563952.1
CDS CCA 72 bp AATGCAATCAGGGCCAAGATCGGCTCGGTGGTGGGCTaGTACGGGCTGCTGGCGCCCGAGATCATGGAGGTG +
Preference number: 6 (lower is better)
Translates to: NAIRAKIGSVVG*YGLLAPEIMEV
Trigger: CACCTCCATGATCTCGGGCGCCAGCAGCCCGTACCAGCCCACCACCGAGCCGATCTTGGCCCTGATTGCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563952.1
CDS GCA 72 bp GCTCTGCTGGCGGACGCTGACTCTCCATTTCTGCACTaGCAGGAATGTGTTCACTGCATATGCCGCAGTCGC +
Preference number: 6 (lower is better)
Translates to: ALLADADSPFLH*QECVHCICRSR
Trigger: GCGACTGCGGCATATGCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS GCA 72 bp CGGGGAGCATGCCATGATGGTCTCTATGCAGATGAATaGAATCAGGGCCAAGATCGGCTCGGTGGTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RGACHDGLYADE*NQGQDRLGGGL
Trigger: CAGCCCACCACCGAGCCGATCTTGGCCCTGATTGCATTCATCTGCATAGAGACCATCATGGCATGCTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563952.1
CDS TCA 72 bp CTCGGATGTAGTCATTGGTGCTCTGCTGGCGGACGCTaGCTCTCCATTTCTGCACTGCCAGGAATGTGTTCA +
Preference number: 6 (lower is better)
Translates to: LGCSHWCSAGGR*LSISALPGMCS
Trigger: TGAACACATTCCTGGCAGTGCAGAAATGGAGAGTCAGCGTCCGCCAGCAGAGCACCAATGACTACATCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS GCA 72 bp CGGGGAGCATGCCATGATGGTCTCTATGCAGATGAATaGAATCAGGGCCAAGATCACTTGGGCGACCTTGAG +
Preference number: 6 (lower is better)
Translates to: RGACHDGLYADE*NQGQDHLGDLE
Trigger: CTCAAGGTCGCCCAAGTGATCTTGGCCCTGATTGCATTCATCTGCATAGAGACCATCATGGCATGCTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330687.8
ENST00000394106.7
CDS GCA 72 bp CCATTTCTGCACTGCCAGGAATGTGTTCACTGCATATaGCGCAGTCGCCAAGAAGCCAAATATCACGGCAGC +
Preference number: 6 (lower is better)
Translates to: PFLHCQECVHCI*RSRQEAKYHGS
Trigger: GCTGCCGTGATATTTGGCTTCTTGGCGACTGCGGCATATGCAGTGAACACATTCCTGGCAGTGCAGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS GCA 72 bp GACTCTCCATTTCTGCACTGCCAGGAATGTGTTCACTaGATATGCCGCAGTCGCCAAGAAGCCAAATATCAC +
Preference number: 6 (lower is better)
Translates to: DSPFLHCQECVH*ICRSRQEAKYH
Trigger: GTGATATTTGGCTTCTTGGCGACTGCGGCATATGCAGTGAACACATTCCTGGCAGTGCAGAAATGGAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS CAA 72 bp AGATTCCAGTTGATCTGGGGGATCCTCATGTGCAGGTaGAGACTGAACATAATCAGCAAGACGCCAGTCACC +
Preference number: 6 (lower is better)
Translates to: RFQLIWGILMCR*RLNIISKTPVT
Trigger: GGTGACTGGCGTCTTGCTGATTATGTTCAGTCTCAACCTGCACATGAGGATCCCCCAGATCAACTGGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS CAA 72 bp CTGAGTCCAGTGTTGACCAAATCTGTCAGATTCCAGTaGATCTGGGGGATCCTCATGTGCAGGTTGAGACTG +
Preference number: 6 (lower is better)
Translates to: LSPVLTKSVRFQ*IWGILMCRLRL
Trigger: CAGTCTCAACCTGCACATGAGGATCCCCCAGATCAACTGGAATCTGACAGATTTGGTCAACACTGGACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS CAA 90 bp AAATCTGTCAGATTCCAGTTGATCTGGGGGATCCTCATGTGCAGGTaGAGACTGAACATAATCAGCAAGACGCCAGTCACCACAAACGCA +
Preference number: 6 (lower is better)
Translates to: KSVRFQLIWGILMCR*RLNIISKTPVTTNA
Trigger: TGCGTTTGTGGTGACTGGCGTCTTGCTGATTATGTTCAGTCTCAACCTGCACATGAGGATCCCCCAGATCAACTGGAATCTGACAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000563952.1
CDS CCA 72 bp CCAGTGTTGACCAAATCTGTCAGATTCCAGTTGATCTaGGGGATCCTCATGTGCAGGTTGAGACTGAACATA +
Preference number: 6 (lower is better)
Translates to: PVLTKSVRFQLI*GILMCRLRLNI
Trigger: TATGTTCAGTCTCAACCTGCACATGAGGATCCCCCAGATCAACTGGAATCTGACAGATTTGGTCAACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1
CDS CCA 72 bp CCAAATATCACGGCAGCAATTTCTGCTCCGGCTCTATaGTTTAAAGCAGCCAGTACGATTGAAGCAATAAAG +
Preference number: 6 (lower is better)
Translates to: PNITAAISAPAL*FKAASTIEAIK
Trigger: CTTTATTGCTTCAATCGTACTGGCTGCTTTAAACCATAGAGCCGGAGCAGAAATTGCTGCCGTGATATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330687.8
ENST00000394106.7
ENST00000561680.5
ENST00000563952.1