RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CMTM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000140931

Ensembl transcript IDs: ENST00000361909.8, ENST00000424011.6, ENST00000460097.5, ENST00000562357.5, ENST00000562707.5, ENST00000563672.5, ENST00000564060.5, ENST00000564247.1, ENST00000565003.5, ENST00000565666.5, ENST00000565922.1, ENST00000566121.1, ENST00000566756.5, ENST00000567572.6, ENST00000568477.5

Found 655 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGTCATTGTCACCAAAGTGGCTGGTGTGGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGT +
Preference number: 1 (lower is better)
Translates to: RVIVTKVAGVGRSTK*RQTHRGLAGQPCHG
Trigger: ACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACAATGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR TCA 90 bp ATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTaGGGGGCAAGCCTGGTAGGCTGGGCTCAGGCAGAACCTGAGGCT +
Preference number: 1 (lower is better)
Translates to: IPKMPSYAAWSTVLS*GASLVGWAQAEPEA
Trigger: AGCCTCAGGTTCTGCCTGAGCCCAGCCTACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 90 bp CTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTaGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTCCTGTTAGT +
Preference number: 1 (lower is better)
Translates to: LVWAGAPSADKPTGA*RGSPVMVSVFVPVS
Trigger: ACTAACAGGAACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR GCA 90 bp CAGAAGACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTaGCCAGATACAGACAAGGCTCTGCTTTGTCTCCTTGTGCTGGTT +
Preference number: 1 (lower is better)
Translates to: QKTPDPRHLAAWNTC*PDTDKALLCLLVLV
Trigger: AACCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTCTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR GCA 90 bp AAACAGAAGACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTaGTGCCCAGATACAGACAAGGCTCTGCTTTGTCTCCTTGTGCTG +
Preference number: 1 (lower is better)
Translates to: KQKTPDPRHLAAWNT*CPDTDKALLCLLVL
Trigger: CAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTCTTCTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 90 bp AACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGG +
Preference number: 1 (lower is better)
Translates to: NQRFLEGSLSPKWLV*AGAPSADKPTGAWR
Trigger: CCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGAC +
Preference number: 1 (lower is better)
Translates to: TQNGHLTPRRHGFQG*EVLVMGAEPHFLGD
Trigger: GTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR CCA 90 bp CTGTTAGTGAAACAGAAGACCCCCGACCCCCGCCACCTAGCAGCATaGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTCTC +
Preference number: 1 (lower is better)
Translates to: LLVKQKTPDPRHLAA*NTCCPDTDKALLCL
Trigger: GAGACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTCTTCTGTTTCACTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 90 bp CAGCACTGCTGGGGTGATCAGGGCAGCCGCTTACCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTG +
Preference number: 1 (lower is better)
Translates to: QHCWGDQGSRLPSVL*AVVSSAESPCLRNL
Trigger: CAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCCTGATCACCCCAGCAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565666.5
3UTR CCA 90 bp TGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTaGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGG +
Preference number: 1 (lower is better)
Translates to: CSLNQRFLEGSLSPK*LVWAGAPSADKPTG
Trigger: CCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 90 bp GAAACAGTCTTAGACCCAGAATGGTCATCTCACCCCCAGAAGACATaGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCA +
Preference number: 1 (lower is better)
Translates to: ETVLDPEWSSHPQKT*FPRVGGVSYGCRAP
Trigger: TGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGTCTAAGACTGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR GCA 90 bp TCAGGGCAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGAT +
Preference number: 1 (lower is better)
Translates to: SGQPLTFCLVGCGLI*RVPLFEEFGHVVKD
Trigger: ATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
3UTR TCA 90 bp TTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTTCAAGAATaGAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGG +
Preference number: 1 (lower is better)
Translates to: FLGDKAKVNFSLLQE*RGNWCSLNQRFLEG
Trigger: CCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR GCA 90 bp CGAGTCGGAATTCTCTTCTTCTGTCTTGTGGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGAT +
Preference number: 1 (lower is better)
Translates to: RVGILFFCLVGCGLI*RVPLFEEFGHVVKD
Trigger: ATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGAAGAGAATTCCGACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
3UTR TCA 90 bp TCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGG +
Preference number: 1 (lower is better)
Translates to: SISPCFKNEEGTGAP*TKDSWKGHCHQSGW
Trigger: CCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR GCA 90 bp TTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAAGAAGCCAAACACCTGTGGACAGGG +
Preference number: 1 (lower is better)
Translates to: FEEFGHVVKDQVEIS*KHDGSKEAKHLWTG
Trigger: CCCTGTCCACAGGTGTTTGGCTTCTTTGCTACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
3UTR CCA 90 bp AAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATaGGTCCAGAACTCTGGCTCTTTTGTGAGGCCTAGAGTCACAGAA +
Preference number: 1 (lower is better)
Translates to: KRFTRKRIRLQMLQT*VQNSGSFVRPRVTE
Trigger: TTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGTTCTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 90 bp TTCACGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTaGTGTTACCAGTTTGTACTGAAGCCTGATACAATACCCAACAGT +
Preference number: 1 (lower is better)
Translates to: FTCIFAKTESCQDPH*CYQFVLKPDTIPNS
Trigger: ACTGTTGGGTATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp AGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: SPGLRSNASDPCEAQGWRLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...CCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
3UTR-3UTR GCA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: RSPLCNSEVQASAPTPATLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
3UTR-3UTR GCA 90 bp CAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: QPPLQLRSPGLRSNASDPLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...GGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
3UTR-3UTR TCA 90 bp GCTCAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCGTGGTCAACAGTGCTaGGCTGAGGGGCAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: AQAEPEAVGGLLCPQPPLRGQQC*AEGQAW
Trigger: CCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACG...CAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLAGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp GTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: VSAAPSATQKSRPPLQRQVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...CTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
3UTR-3UTR CCA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGAAACCCACCGGGGCCTaGCGGGGCAGCCCTGTCATG +
Preference number: 2 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLKPTGA*RGSPVM
Trigger: CATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTT...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp GGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 2 (lower is better)
Translates to: GGLLCPQPPLQLRSPGLRVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...GCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGCCAGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: GGFGWARPAPHDTVTVMPGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...TGGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: PLQLRSPGLRSNASDPCEGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...CTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
3UTR-3UTR CCA 90 bp GAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGGGAAGAAGGAGGGTTTaGCTGGGCCCGCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: EEGGFGWARPAPHDTVTVGRRRV*LGPPSS
Trigger: GGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCC...CACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 2 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLAVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp GAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 2 (lower is better)
Translates to: EEGGFGWARPAPHDTVTVGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...CACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp GAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGGCATGGAACACCTGCTaGCCAGATACAGACAAGGCT +
Preference number: 2 (lower is better)
Translates to: EHQVQTNPPGPGGAALSWAWNTC*PDTDKA
Trigger: AGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGC...CCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGCAGCATGGAACACCTaGTGCCCAGATACAGACAAG +
Preference number: 2 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLAAAWNT*CPDTDK
Trigger: CTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGC...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp ACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: TQDALIRSVVNSAELRGKVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...CTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp TCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGTGTGGCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: SLNQRFLEGSLSPKWLVWRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...CCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp TGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: WDTQDALIRSVVNSAELRVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...CCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGAAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 2 (lower is better)
Translates to: DPRPPPPSSMEHLLPRYRNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...TCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLRAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: EEGGFGWARPAPHDTVTVRAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...CACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAACGCCACCTAGCAGCATaGAACACCTGCTGCCCAGAT +
Preference number: 2 (lower is better)
Translates to: PRVGGVSYGCRAPLPGRQRHLAA*NTCCPD
Trigger: ATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCG...TTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTTGTCACCAAAGTGGCTaGTGTGGGCAGGAGCACCAA +
Preference number: 2 (lower is better)
Translates to: ADKPTGAWRGSPVMVSVFCHQSG*CGQEHQ
Trigger: TTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACA...AAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp GACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTCCGCCCAGCTCCCCATaGCACTGTCACTGTGATGCC +
Preference number: 2 (lower is better)
Translates to: DPEWSSHPQKTWFPRVGGPPSSP*HCHCDA
Trigger: GGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGG...ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 2 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566756.5
3UTR-3UTR CCA 90 bp ATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: MGRRSGIPKMPSYAAWSTGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...TGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGGGGGCAGCCCTGTCATaGTTTCTGTCTTTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLGAALS*FLSLFL
Trigger: CAGGAACAAAGACAGAAACCATGACAGGGCTGCCCC...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp TGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATACCCCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: CQDPHWCYQFVLKPDTIPRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...GGGTATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp CACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTCGTGGTCAACAGTGCTaGGCTGAGGGGCAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: HLAAWNTCCPDTDKALLCRGQQC*AEGQAW
Trigger: CCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACG...ACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp GCTGGTTGTCTGGGATCACTTGCTGCGGGCAACTGGGAGCAGGTTGCAGAGCCTAGGGACGGGATGGGATaGGTGGCATTCATTTTCAGC +
Preference number: 2 (lower is better)
Translates to: AGCLGSLAAGNWEQVAEPRDGMG*VAFIFS
Trigger: GCTGAAAATGAATGCCACTCATCCCATCCCGTCCCT...AGGCTCTGCAACCTGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
3UTR-3UTR CCA 90 bp AAATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAAGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: KWGEGVGYPRCPHTQRGQGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...TTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGTTTGTCTCCTTGTGCTaGTTTTTGGCAGAGACGTTA +
Preference number: 2 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLAFVSLC*FLAETL
Trigger: TAACGTCTCTGCCAAAAACCAGCACAAGGAGACAAA...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGCCGAGCCCCACTTCCTaGGCGACAAGGCAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: TQNGHLTPRRHGFQGWEVPSPTS*ATRQRS
Trigger: TGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGG...CACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 2 (lower is better)
Translates to: EGGFGWARPAPHDTVTVMVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...CATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR CAA 90 bp GGGCTGGTTGTCTGGGATCACTTGCTGCGGGCAACTGGGAGCAGGTaGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTT +
Preference number: 2 (lower is better)
Translates to: GLVVWDHLLRATGSR*QSLRKPPGSSNLIF
Trigger: AAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCTGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
3UTR-3UTR TCA 90 bp AGCTGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATACGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: SCQDPHWCYQFVLKPDTIRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...TATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp CCCTGTTGCAGCACTGCTGGGGTGATCAGGGCAGCCGCTTACCTTCTGTCTTGTCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 2 (lower is better)
Translates to: PCCSTAGVIRAAAYLLSCQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...ACAAGACAGAAGGTAAGCGGCTGCCCTGATCACCCCAGCAGTGCTGCAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565666.5
3UTR-3UTR GCA 90 bp TGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: WSSHPQKTWFPRVGGVSYLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...ATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp AAGACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACAATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: KTPDPRHLAAWNTCCPDTIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...TGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp AGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: SYGCRAPLPGRQGKGQFLPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...GAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTTCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 2 (lower is better)
Translates to: ADKPTGAWRGSPVMVSVFSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...AAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566756.5
3UTR-3UTR GCA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 2 (lower is better)
Translates to: TQNGHLTPRRHGFQGWEVVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...CACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp TTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: FQGWEVLVMGAEPHFLGDIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...GTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTCGCCACCTAGCAGCATaGAACACCTGCTGCCCAGAT +
Preference number: 2 (lower is better)
Translates to: HLAAWNTCCPDTDKALLCRHLAA*NTCCPD
Trigger: ATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCG...ACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp AAGTTTCCACTGACGTTTACTAATTGGTCCCTGGGCTGGTTGTCTGGGATCACTGCAGGTTGCAGAGCCTaGGGAAACCGCCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: KFPLTFTNWSLGWLSGITAGCRA*GNRLGA
Trigger: AGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCTGC...AGTGATCCCAGACAACCAGCCCAGGGACCAATTAGTAAACGTCAGTGGAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
3UTR-3UTR GCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 2 (lower is better)
Translates to: LVLLEPKILGRVIVTKVAGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp GAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: EEGGFGWARPAPHDTVTVRSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...CACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR CAA 90 bp AGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATaGTCACCAAAGTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: RGNWCSLNQRFLEGS*SPKWLVWAGAPSAD
Trigger: GTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp AGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 2 (lower is better)
Translates to: RELVLLEPKILGRVIVTKGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...TTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: HLTPRRHGFQGWEVLVMGRAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...ACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTTTTGTCTCCTTGTGCTaGTTTTTGGCAGAGACGTTA +
Preference number: 2 (lower is better)
Translates to: DKPTGAWRGSPVMVSVFVFVSLC*FLAETL
Trigger: TAACGTCTCTGCCAAAAACCAGCACAAGGAGACAAA...AACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp AATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTCCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: NGHLTPRRHGFQGWEVLVPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...AACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: TQNGHLTPRRHGFQGWEVGTGAP*TKDSWK
Trigger: CTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCC...CACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTCGCCACCTAGCAGCATaGAACACCTGCTGCCCAGAT +
Preference number: 2 (lower is better)
Translates to: LVLLEPKILGRVIVTKVARHLAA*NTCCPD
Trigger: ATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCG...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGCCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: GNWCSLNQRFLEGSLSPKPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...CTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp TGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: WSSHPQKTWFPRVGGVSYLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...ATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566756.5
3UTR-3UTR GCA 90 bp TGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGCAGCATGGAACACCTaGTGCCCAGATACAGACAAG +
Preference number: 2 (lower is better)
Translates to: WSSHPQKTWFPRVGGVSYAAWNT*CPDTDK
Trigger: CTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGC...ATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp AGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: RGNWCSLNQRFLEGSLSPRAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...TGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: LVLLEPKILGRVIVTKVARAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGTCACCAAAGTGGCTaGTGTGGGCAGGAGCACCAA +
Preference number: 2 (lower is better)
Translates to: GNWCSLNQRFLEGSLSPKCHQSG*CGQEHQ
Trigger: TTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACA...CTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp AGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: SYGCRAPLPGRQGKGQFLRSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...GAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTGGGGCAGCCCTGTCATaGTTTCTGTCTTTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: GKGQFLPASRMKRELVLLGAALS*FLSLFL
Trigger: CAGGAACAAAGACAGAAACCATGACAGGGCTGCCCC...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTCATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGT +
Preference number: 2 (lower is better)
Translates to: HLTPRRHGFQGWEVLVMGHGFQG*EVLVMG
Trigger: ACCCATAACTAACACCTCCCACCCTTGGAAACCATG...ACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp AATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTGTCTTAGACCCAGAATaGTCATCTCACCCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: NGHLTPRRHGFQGWEVLVVLDPE*SSHPQK
Trigger: CTTCTGGGGGTGAGATGACCATTCTGGGTCTAAGAC...AACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp AATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 2 (lower is better)
Translates to: NGHLTPRRHGFQGWEVLVVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...AACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp AGCTGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATACTCCTGCCTGCTGGCTaGGCTCTAGGAAGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: SCQDPHWCYQFVLKPDTILLPAG*ALGRRR
Trigger: CCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAGGAG...TATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp AGCTGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATAGGAAGTTCACTGTCCTaGGGGTCCAGGAACTCCTGC +
Preference number: 2 (lower is better)
Translates to: SCQDPHWCYQFVLKPDTIGSSLS*GSRNSC
Trigger: GCAGGAGTTCCTGGACCCTCAGGACAGTGAACTTCC...TATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTCCAGGAACTCCTGCCTaGTGGCTGGGCTCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSPGTPA*WLGSRK
Trigger: CTTCCTAGAGCCCAGCCAGCAGGCAGGAGTTCCTGG...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR CAA 90 bp CTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATC +
Preference number: 2 (lower is better)
Translates to: LTFCLVGCGLICRVP*FEEFGHVVKDQVEI
Trigger: GATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
3UTR CAA 90 bp CTCTTCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATC +
Preference number: 2 (lower is better)
Translates to: LFFCLVGCGLICRVP*FEEFGHVVKDQVEI
Trigger: GATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
3UTR-3UTR TCA 90 bp CAAACATGGGTCCAGAACTCTGGCTCTTTTGTGAGGCCTAGAGTCACAGAAAATATGACACTGTCACTGTaGTGCCACTGTTGTACCCTC +
Preference number: 2 (lower is better)
Translates to: QTWVQNSGSFVRPRVTENMTLSL*CHCCTL
Trigger: GAGGGTACAACAGTGGCATCACAGTGACAGTGTCAT...ATTTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGTTCTGGACCCATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTTGCTTTGTCTCCTTGTaGTGGTTTTTGGCAGAGACG +
Preference number: 2 (lower is better)
Translates to: LVLLEPKILGRVIVTKVACFVSL*WFLAET
Trigger: CGTCTCTGCCAAAAACCAGCACAAGGAGACAAAGCA...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LVLLEPKILGRVIVTKVAIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp TTCACGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCCAGGAACTCCTGCCTaGTGGCTGGGCTCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: FTCIFAKTESCQDPHWCYPGTPA*WLGSRK
Trigger: CTTCCTAGAGCCCAGCCAGCAGGCAGGAGTTCCTGG...GTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp AAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATGGGTCCAGGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: KRFTRKRIRLQMLQTWVQGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...CTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
3UTR-3UTR CCA 90 bp TTTCAGGGTAAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACACCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: FQGKRFTRKRIRLQMLQTPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...TGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTTACCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp GGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGCATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGT +
Preference number: 2 (lower is better)
Translates to: GNWCSLNQRFLEGSLSPKHGFQG*EVLVMG
Trigger: ACCCATAACTAACACCTCCCACCCTTGGAAACCATG...CTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp TTTCAGGGTAAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACAGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 2 (lower is better)
Translates to: FQGKRFTRKRIRLQMLQTVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...TGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTTACCCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp CAAACATGGGTCCAGAACTCTGGCTCTTTTGTGAGGCCTAGAGTCACAGAAAATATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: QTWVQNSGSFVRPRVTENIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...ATTTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGTTCTGGACCCATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp TTTCAGGGTAAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACAAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 2 (lower is better)
Translates to: FQGKRFTRKRIRLQMLQTNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...TGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTTACCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp TTCACGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 2 (lower is better)
Translates to: FTCIFAKTESCQDPHWCYNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...GTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp TTTCAGGGTAAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACAGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 2 (lower is better)
Translates to: FQGKRFTRKRIRLQMLQTVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...TGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTTACCCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTACTCTGGCTCTTTTGTaGGGCCTAGAGTCACAGAAA +
Preference number: 2 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSTLALL*GLESQK
Trigger: TTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGT...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR-3UTR TCA 90 bp TTTCAGGGTAAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACAACTCTGGCTCTTTTGTaGGGCCTAGAGTCACAGAAA +
Preference number: 2 (lower is better)
Translates to: FQGKRFTRKRIRLQMLQTTLALL*GLESQK
Trigger: TTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGT...TGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTTACCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTCATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGT +
Preference number: 2 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSHGFQG*EVLVMG
Trigger: ACCCATAACTAACACCTCCCACCCTTGGAAACCATG...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR-3UTR GCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSRSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 3 (lower is better)
Translates to: RSPLCNSEVQASAPTPATPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
3UTR-3UTR CAA 90 bp CTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LQLRSPGLRSNASDPCEAPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...CGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
3UTR-3UTR CAA 90 bp TGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 3 (lower is better)
Translates to: CNSEVQASAPTPATPVRRPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...GCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
3UTR GCA 72 bp GTCACCAAAGTGGCTGGTGTGGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGCCTGGCGGGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: VTKVAGVGRSTK*RQTHRGLAGQP
Trigger: GGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp TGGGCTGGTTGTCTGGGATCACTTGCTGCGGGCAACTaGGAGCAGGTTGCAGAGCCTGAGGAAACCGCCTGG +
Preference number: 3 (lower is better)
Translates to: WAGCLGSLAAGN*EQVAEPEETAW
Trigger: CCAGGCGGTTTCCTCAGGCTCTGCAACCTGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
3UTR-3UTR CAA 90 bp AGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 3 (lower is better)
Translates to: SYGCRAPLPGRQGKGQFLPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...GAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR GCA 72 bp ACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTaGTGCCCAGATACAGACAAGGCTCTGCTTTGTCTC +
Preference number: 3 (lower is better)
Translates to: TPDPRHLAAWNT*CPDTDKALLCL
Trigger: GAGACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp GCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTaGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTT +
Preference number: 3 (lower is better)
Translates to: AGAPSADKPTGA*RGSPVMVSVFV
Trigger: AACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR GCA 72 bp CCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTaGCCAGATACAGACAAGGCTCTGCTTTGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: PDPRHLAAWNTC*PDTDKALLCLL
Trigger: AAGGAGACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp CATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 3 (lower is better)
Translates to: HLTPRRHGFQGWEVLVMGPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...ACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp GAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGAGACAAGGCTCTGCTTaGTCTCCTTGTGCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: EGGFGWARPAPHDTVTVMRQGSA*SPCAGF
Trigger: AAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCT...CATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp TTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCAGACAAACCCACCGGG +
Preference number: 3 (lower is better)
Translates to: FLEGSLSPKWLV*AGAPSADKPTG
Trigger: CCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp TGGGGTGATCAGGGCAGCCGCTTACCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTG +
Preference number: 3 (lower is better)
Translates to: WGDQGSRLPSVL*AVVSSAESPCL
Trigger: CAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCCTGATCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565666.5
3UTR GCA 72 bp CATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGGTTTTTGGCAGAGACG +
Preference number: 3 (lower is better)
Translates to: HGTPAAQIQTRL*FVSLCWFLAET
Trigger: CGTCTCTGCCAAAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp AAGTTTCCACTGACGTTTACTAATTGGTCCCTGGGCTaGTTGTCTGGGATCACTTGCTGCGGGCAACTGGGA +
Preference number: 3 (lower is better)
Translates to: KFPLTFTNWSLG*LSGITCCGQLG
Trigger: TCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGCCCAGGGACCAATTAGTAAACGTCAGTGGAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
3UTR-3UTR CAA 90 bp CATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTACTGTGATGCCACTGTaGTACCCTCTGTCTTCTGGA +
Preference number: 3 (lower is better)
Translates to: HLTPRRHGFQGWEVLVMGTVMPL*YPLSSG
Trigger: TCCAGAAGACAGAGGGTACAACAGTGGCATCACAGT...ACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 3 (lower is better)
Translates to: TQNGHLTPRRHGFQGWEVPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...CACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566756.5
3UTR CCA 72 bp AAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTaGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCA +
Preference number: 3 (lower is better)
Translates to: KDSWKGHCHQSG*CGQEHQVQTNP
Trigger: TGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp TTAGACCCAGAATGGTCATCTCACCCCCAGAAGACATaGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGC +
Preference number: 3 (lower is better)
Translates to: LDPEWSSHPQKT*FPRVGGVSYGC
Trigger: GCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp AATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTTTCTTGGAAGGGTCATaGTCACCAAAGTGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: NGHLTPRRHGFQGWEVLVFLEGS*SPKWLV
Trigger: CACCAGCCACTTTGGTGACAATGACCCTTCCAAGAA...AACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp AACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTaGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAA +
Preference number: 3 (lower is better)
Translates to: NQRFLEGSLSPK*LVWAGAPSADK
Trigger: TTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTTCCTTGTGCTGGTTTTaGGCAGAGACGTTAAAGGGC +
Preference number: 3 (lower is better)
Translates to: LVLLEPKILGRVIVTKVASLCWF*AETLKG
Trigger: GCCCTTTAACGTCTCTGCCAAAAACCAGCACAAGGA...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTTCCTTGTGCTGGTTTTaGGCAGAGACGTTAAAGGGC +
Preference number: 3 (lower is better)
Translates to: GKGQFLPASRMKRELVLLSLCWF*AETLKG
Trigger: GCCCTTTAACGTCTCTGCCAAAAACCAGCACAAGGA...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR TCA 72 bp CCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAGGGTCATTGTCACCAA +
Preference number: 3 (lower is better)
Translates to: PCFKNEEGTGAP*TKDSWKGHCHQ
Trigger: TTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp TGTCACTGTGATGCCACTGTTGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGCTCTTCTTTGAAACAG +
Preference number: 3 (lower is better)
Translates to: CHCDATVVPSVF*TSQSMSSSLKQ
Trigger: CTGTTTCAAAGAAGAGCTCATAGACTGACTGGTCCAGAAGACAGAGGGTACAACAGTGGCATCACAGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
3UTR CCA 72 bp ACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATaGGTCCAGAACTCTGGCTCTTTTGTGAGGCCTAGA +
Preference number: 3 (lower is better)
Translates to: TRKRIRLQMLQT*VQNSGSFVRPR
Trigger: TCTAGGCCTCACAAAAGAGCCAGAGTTCTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp AAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATGGGTCCAGGGGAACTGGTGCTCCTaGAACCAAAGATTCTTGGAA +
Preference number: 3 (lower is better)
Translates to: KRFTRKRIRLQMLQTWVQGNWCS*NQRFLE
Trigger: TTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC...CTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR TCA 72 bp GCTGTCAGGATCCACATTGGTGTTACCAGTTTGTACTaGAGCCTGATACAATACCCAACAGTATTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: AVRIHIGVTSLY*SLIQYPTVLLW
Trigger: CCAGAGCAATACTGTTGGGTATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTAGACAAGGCTCTGCTTaGTCTCCTTGTGCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSRQGSA*SPCAGF
Trigger: AAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCT...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR-3UTR CAA 90 bp TTCACGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACAGACAAGGCTCTGCTTaGTCTCCTTGTGCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: FTCIFAKTESCQDPHWCYRQGSA*SPCAGF
Trigger: AAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCT...GTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
3UTR CCA 72 bp ATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTaGTGTTACCAGTTTGTACTGAAGCCTGATACAATA +
Preference number: 3 (lower is better)
Translates to: IFAKTESCQDPH*CYQFVLKPDTI
Trigger: TATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp CCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PQPPLQLRSPGLRSNASDRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...GTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCAAACCCACCGGGGCCTaGCGGGGCAGCCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: VQASAPTPATPVRRRGGGKPTGA*RGSPVM
Trigger: CATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTT...GCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CNSEVQASAPTPATPVRRRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...GCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp CAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QLRSPGLRSNASDPCEAQRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...CTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp CAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QASAPTPATPVRRRGGGLLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...CAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp CCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACGAAAGCGGACCCCGCTaGGGCCCGGGAGTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PQPPLQLRSPGLRSNASDESGPR*GPGVPE
Trigger: CTCCGGGACTCCCGGGCCGCAGCGGGGTCCGCTTTC...GTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568477.5
CDS-3UTR TCA 90 bp GACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DPRPPPPSSMEHLLPRYRRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...TCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGTGCGTGGTCAACAGTGCTaGGCTGAGGGGCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLRSNASDPCEAQGWRPVRGQQC*AEGQAW
Trigger: CCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACG...CACAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGLRSNASDPCEAQGWRPVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...AGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGCCCGTGCGCGTGTCTaGGATCCGGGAACCCAGGCG +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRARARV*DPGTQA
Trigger: CGCCTGGGTTCCCGGATCCCAGACACGCGCACGGGC...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR CCA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCGCCCGTGCGCGTGTCTaGGATCCGGGAACCCAGGCG +
Preference number: 4 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLARARV*DPGTQA
Trigger: CGCCTGGGTTCCCGGATCCCAGACACGCGCACGGGC...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR CCA 90 bp CAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGCCGAGCCCCACTTCCTaGGCGACAAGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QASAPTPATPVRRRGGGLPSPTS*ATRQRS
Trigger: TGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGG...CAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FQGWEVLVMGAEPHFLGDRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...GTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGTGGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLRSNASDPCEAQGWRPVGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...CACAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GGLLCPQPPLQLRSPGLRGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...GCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGTGCGCCACCTAGCAGCATaGAACACCTGCTGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GLRSNASDPCEAQGWRPVRHLAA*NTCCPD
Trigger: ATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCG...CACAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGTGAGCCAAACACCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GLRSNASDPCEAQGWRPVSQTPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGTGTTTGGCT...CACAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564060.5
CDS-3UTR TCA 90 bp TGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WFPRVGGVSYGCRAPLPGRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCCGTGGTCAACAGTGCTaGGCTGAGGGGCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLLCPQPPLQLRSPGLRSRGQQC*AEGQAW
Trigger: CCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACG...GGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RSPLCNSEVQASAPTPATVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp GTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: VQASAPTPATPVRRRGGGVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...GCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 4 (lower is better)
Translates to: LPAGWALGRRRVWLGPPSGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...GCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 4 (lower is better)
Translates to: EHQVQTNPPGPGGAALSWGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...CCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PGLRSNASDPCEAQGWRPLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...AGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp CCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PQPPLQLRSPGLRSNASDGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...GTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp GGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGCCACAAAGACCCCGGCCGTaGTGTCGGCTCCGCAACCCA +
Preference number: 4 (lower is better)
Translates to: GGFGWARPAPHDTVTVMPQRPRP*CRLRNP
Trigger: TGGGTTGCGGAGCCGACATCACGGCCGGGGTCTTTG...TGGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR TCA 90 bp CAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: QASAPTPATPVRRRGGGLQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...CAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp GTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: VQASAPTPATPVRRRGGGQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...GCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp AGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTCCGCCCAGCTCCCCATaGCACTGTCACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SPLCNSEVQASAPTPATPPPSSP*HCHCDA
Trigger: GGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGG...AGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGATGCATCACAGGGCTaGCTCCCTGCTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLCPQPPLQLRSPGLRSNDASQG*LPAPGG
Trigger: GCCTCCCGGAGCAGGGAGTCAGCCCTGTGATGCATC...GTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGCTAACTTCCTGCCCGTaGGCGTGTCTGGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRLTSCP*ACLGSG
Trigger: CCCGGATCCCAGACACGCGCACGGGCAGGAAGTTAG...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR GCA 90 bp CTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCGGTCTAACTTCCTaGCCGTGCGCGTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPAGWALGRRRVWLGPPSSGLTS*PCACLG
Trigger: TCCCAGACACGCGCACGGGCAGGAAGTTAGACCGGA...GCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR GCA 90 bp CTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRSPGLRSNASDPCEAQGGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...CCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp CCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLQLRSPGLRSNASDPCELCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...CTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp AGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPLCNSEVQASAPTPATPVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...AGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp CTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 4 (lower is better)
Translates to: LQLRSPGLRSNASDPCEAGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...CGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGAGGACTCTCAGACCTaGAAGCGCAGCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGEDSQT*KRSSRH
Trigger: GTGCCTGGAGCTGCGCTTGCAGGTCTGAGAGTCCTC...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424011.6
CDS-3UTR GCA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTCGGAAACCCGGGCTGTaGGGAAGGAGGGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLRKPGL*GRRAGD
Trigger: GTCGCCTGCCCTCCTTCCGCACAGCCCGGGTTTCCG...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567572.6
CDS-3UTR CCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGCAGGAAGTCCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGAGSPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGC...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGGCAGGAAGTCCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: APSATQKSRPPLQRQRPLAGSPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGC...CAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VSAAPSATQKSRPPLQRQGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...CTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCGGGGCAGCCCTGTCATaGTTTCTGTCTTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VQASAPTPATPVRRRGGGGAALS*FLSLFL
Trigger: CAGGAACAAAGACAGAAACCATGACAGGGCTGCCCC...GCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CACCAAAGTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGAAACCCACCGGGGCCTaGCGGGGCAGCCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: HQSGWCGQEHQVQTNPPGKPTGA*RGSPVM
Trigger: CATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTT...CCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCCCGAGCCCCACTTCCTaGGCGACAAGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPAGWALGRRRVWLGPPSPSPTS*ATRQRS
Trigger: TGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGG...GCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCTCAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCCGAGCCCCACTTCCTaGGCGACAAGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: AQAEPEAVGGLLCPQPPLPSPTS*ATRQRS
Trigger: TGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGG...CAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCCCGAGCCCCACTTCCTaGGCGACAAGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPPSPTS*ATRQRS
Trigger: TGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGG...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGGGAAGAAGGAGGGTTTaGCTGGGCCCGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LCNSEVQASAPTPATPVRGRRRV*LGPPSS
Trigger: GGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCC...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGCTCCTGCCTGCTGGCTaGGCTCTAGGAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLALLPAG*ALGRRR
Trigger: CCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAGGAG...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTCCTGCCTGCTGGCTaGGCTCTAGGAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: AAPSATQKSRPPLQRQRPLLPAG*ALGRRR
Trigger: CCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAGGAG...GGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTCTCCTGCCTGCTGGCTaGGCTCTAGGAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGLLPAG*ALGRRR
Trigger: CCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAGGAG...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTCCAGGGCCTCTTTGTTaGCTGTTCCAGGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGPGPLC*LFQASV
Trigger: GACCGAGGCCTGGAACAGCCAACAAAGAGGCCCTGG...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424011.6
3UTR CAA 72 bp CCTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTaGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: PACWLGSRKKEG*AGPAQLPMTLS
Trigger: TGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTCCCAAAGACCCCGGCCGTaGTGTCGGCTCCGCAACCCA +
Preference number: 4 (lower is better)
Translates to: QTHRGLAGQPCHGFCLCSQRPRP*CRLRNP
Trigger: TGGGTTGCGGAGCCGACATCACGGCCGGGGTCTTTG...GGAACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR TCA 90 bp CTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LRSPGLRSNASDPCEAQGEEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...CCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp GGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGCCACGTGGTCAACAGTGCTaGGCTGAGGGGCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGFGWARPAPHDTVTVMPRGQQC*AEGQAW
Trigger: CCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACG...TGGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACCCGCCCAGCTCCCCATaGCACTGTCACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LLCPQPPLQLRSPGLRSNPPSSP*HCHCDA
Trigger: GGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGG...GTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRSPLCNSEVQASAPTPAGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...CGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp GAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EEGGFGWARPAPHDTVTVLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...CACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ADKPTGAWRGSPVMVSVFLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...AAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCGGTGTTAGTTATGGGTaGCGAGCCCCACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLLCPQPPLQLRSPGLRSGVSYG*RAPLPG
Trigger: CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACC...GGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGGTGTTAGTTATGGGTaGCGAGCCCCACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLAGVSYG*RAPLPG
Trigger: CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACC...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGCAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCCCTGGTTCGGGCCGCTaGAGACCTCCCGATCACCGC +
Preference number: 4 (lower is better)
Translates to: GQPLTFCLVGCGLICRVPPGSGR*RPPDHR
Trigger: GCGGTGATCGGGAGGTCTCCAGCGGCCCGAACCAGG...GGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR CCA 90 bp AGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGCAGGAAGTCCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPLCNSEVQASAPTPATPAGSPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGC...AGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp TCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGAGCAGGAAGTCCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SAAPSATQKSRPPLQRQRAGSPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGC...TCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGCCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: APSATQKSRPPLQRQRPLPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...CAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AAGACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGGAAGAAGGAGGGTTTaGCTGGGCCCGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KTPDPRHLAAWNTCCPDTGRRRV*LGPPSS
Trigger: GGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCC...TGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGGGAAGAAGGAGGGTTTaGCTGGGCCCGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLGRRRV*LGPPSS
Trigger: GGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCC...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPEEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp AAGACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACACGTGGTCAACAGTGCTaGGCTGAGGGGCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KTPDPRHLAAWNTCCPDTRGQQC*AEGQAW
Trigger: CCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACG...TGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: VQASAPTPATPVRRRGGGGTGAP*TKDSWK
Trigger: CTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCC...GCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QASAPTPATPVRRRGGGLGTGAP*TKDSWK
Trigger: CTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCC...CAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTCCGCCCAGCTCCCCATaGCACTGTCACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLPPSSP*HCHCDA
Trigger: GGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGG...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGAAGTTCACTGTCCTaGGGGTCCAGGAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRGSSLS*GSRNSC
Trigger: GCAGGAGTTCCTGGACCCTCAGGACAGTGAACTTCC...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGCCGGAGTTTTCTTaGGACTTTCTTGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: QLRSPGLRSNASDPCEAQGPEFS*DFLGHP
Trigger: GGGGTGGCCAAGAAAGTCGCAAGAAAACTCCGGCCC...CTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361909.8
ENST00000424011.6
CDS-3UTR GCA 90 bp AGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGGGCCGGAGTTTTCTTaGGACTTTCTTGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: SPLCNSEVQASAPTPATPGPEFS*DFLGHP
Trigger: GGGGTGGCCAAGAAAGTCGCAAGAAAACTCCGGCCC...AGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361909.8
ENST00000424011.6
CDS-3UTR GCA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGCTAACTTCCTGCCCGTaGGCGTGTCTGGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLLTSCP*ACLGSG
Trigger: CCCGGATCCCAGACACGCGCACGGGCAGGAAGTTAG...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR GCA 90 bp CTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LRSPGLRSNASDPCEAQGGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...CCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp GATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTGGTCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DALIRSVVNSAELRGKPGLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...ACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGGFGWARPAPHDTVTVMVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...CATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: EHQVQTNPPGPGGAALSWVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...CCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGTGTTAGTTATGGGTaGCGAGCCCCACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLRSPGLRSNASDPCEAQGVSYG*RAPLPG
Trigger: CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACC...CTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCACAGGGTGGATGGGATaGATCACAGGGCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLTGWMG*ITGLTP
Trigger: GGGAGTCAGCCCTGTGATGCATCCCATCCACCCTGT...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR CCA 90 bp TGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCCTGGTTCGGGCCGCTaGAGACCTCCCGATCACCGC +
Preference number: 4 (lower is better)
Translates to: WFPRVGGVSYGCRAPLPGPGSGR*RPPDHR
Trigger: GCGGTGATCGGGAGGTCTCCAGCGGCCCGAACCAGG...CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361909.8
CDS-3UTR CCA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGGCAGGAAGTCCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCNSEVQASAPTPATPVRAGSPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGC...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp TCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGAACACCCCAGCGGCTTTaGAAGCCCCATCCGAGTACT +
Preference number: 4 (lower is better)
Translates to: SAAPSATQKSRPPLQRQRTPQRL*KPHPST
Trigger: AGTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGT...TCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: AAPSATQKSRPPLQRQRPLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...GGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCTCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: VQASAPTPATPVRRRGGGSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...GCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp CAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGTCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: QASAPTPATPVRRRGGGLSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...CAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: EEGGFGWARPAPHDTVTVGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...CACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRSPGLRSNASDPCEAQGNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...CCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLARAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGCCACCTAGCAGCATaGAACACCTGCTGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: VSAAPSATQKSRPPLQRQRHLAA*NTCCPD
Trigger: ATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCG...CTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGT +
Preference number: 4 (lower is better)
Translates to: VQASAPTPATPVRRRGGGHGFQG*EVLVMG
Trigger: ACCCATAACTAACACCTCCCACCCTTGGAAACCATG...GCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCCACCCCCAGAAGACATaGTTTCCAAGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPAGWALGRRRVWLGPPSHPQKT*FPRVGG
Trigger: ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTG...GCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGCACCCCCAGAAGACATaGTTTCCAAGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: APSATQKSRPPLQRQRPLHPQKT*FPRVGG
Trigger: ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTG...CAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTGCAGGAGGCGGCCTTTaGGAGAGCAGAGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPAAGGGL*ESRGKP
Trigger: GGGCTTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGC...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: CNSEVQASAPTPATPVRREEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...GCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp TCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGAGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SAAPSATQKSRPPLQRQREEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...TCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: RSPLCNSEVQASAPTPATQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp CAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: QPPLQLRSPGLRSNASDPQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...GGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp GTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: VRSPLCNSEVQASAPTPAQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...CGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR TCA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCCCATAGACCTGCCCTaGGGTCTGGAAGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLPIDLP*GLEVHC
Trigger: ACAGTGAACTTCCAGACCTCAGGGCAGGTCTATGGG...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AAPSATQKSRPPLQRQRPGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...GGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp CCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PRVGGVSYGCRAPLPGRQVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...TTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTGGTAGGCTGGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LIRSVVNSAELRGKPGRLVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...CAGCCTACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 4 (lower is better)
Translates to: GFQGWEVLVMGAEPHFLGGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...GCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGGGTGTTAGTTATGGGTaGCGAGCCCCACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LCNSEVQASAPTPATPVRGVSYG*RAPLPG
Trigger: CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACC...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CACTGCTGGGGTGATCAGGGCAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCAGGGCAGGCCCCTGTTaGAGCACTGCTGGGGTGATC +
Preference number: 4 (lower is better)
Translates to: HCWGDQGSRLPSVLWAVVRAGPC*STAGVI
Trigger: GATCACCCCAGCAGTGCTGCAACAGGGGCCTGCCCT...GACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCCTGATCACCCCAGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR CCA 90 bp GAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGGCTTCTTCTTCACCCTaGTTCGGGCCGCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: EEGGFGWARPAPHDTVTVASSSP*FGPLET
Trigger: GGTCTCCAGCGGCCCGAACCAGGGTGAAGAAGAAGC...CACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361909.8
CDS-3UTR CCA 90 bp TGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGACACCCCAGCGGCTTTaGAAGCCCCATCCGAGTACT +
Preference number: 4 (lower is better)
Translates to: CCVRSPLCNSEVQASAPTTPQRL*KPHPST
Trigger: AGTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGT...CGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGACACCCCAGCGGCTTTaGAAGCCCCATCCGAGTACT +
Preference number: 4 (lower is better)
Translates to: LCNSEVQASAPTPATPVRTPQRL*KPHPST
Trigger: AGTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGT...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp CTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTGGTAGGCTGGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LIRSVVNSAELRGKPGRLGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...CAGCCTACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSPLCNSEVQASAPTPATNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCGGGGCAGCCCTGTCATaGTTTCTGTCTTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPAGWALGRRRVWLGPPSGAALS*FLSLFL
Trigger: CAGGAACAAAGACAGAAACCATGACAGGGCTGCCCC...GCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCGGGGCAGCCCTGTCATaGTTTCTGTCTTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AAPSATQKSRPPLQRQRPGAALS*FLSLFL
Trigger: CAGGAACAAAGACAGAAACCATGACAGGGCTGCCCC...GGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGTGTCACCAAAGTGGCTaGTGTGGGCAGGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRCHQSG*CGQEHQ
Trigger: TTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACA...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCTCAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGTCATTGTCACCAAAGTaGCTGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: AQAEPEAVGGLLCPQPPLSLSPK*LVWAGA
Trigger: TGCTCCTGCCCACACCAGCCACTTTGGTGACAATGA...CAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCTCATTGTCACCAAAGTaGCTGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLLCPQPPLQLRSPGLRSSLSPK*LVWAGA
Trigger: TGCTCCTGCCCACACCAGCCACTTTGGTGACAATGA...GGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCTCATTGTCACCAAAGTaGCTGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPSLSPK*LVWAGA
Trigger: TGCTCCTGCCCACACCAGCCACTTTGGTGACAATGA...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCACCTGTGGACAGGGTaGATGGGATGCATCACAGGG +
Preference number: 4 (lower is better)
Translates to: LCNSEVQASAPTPATPVRHLWTG*MGCITG
Trigger: CCCTGTGATGCATCCCATCCACCCTGTCCACAGGTG...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR TCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGATAAAAGTGATGAATaGGAGACCCGACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGDKSDE*ETRLGQ
Trigger: CTGGCCGAGTCGGGTCTCTCATTCATCACTTTTATC...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACGATAAAAGTGATGAATaGGAGACCCGACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQPPLQLRSPGLRSNASDDKSDE*ETRLGQ
Trigger: CTGGCCGAGTCGGGTCTCTCATTCATCACTTTTATC...GTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACATGACACTGTCACTGTaGTGCCACTGTTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: PQPPLQLRSPGLRSNASDMTLSL*CHCCTL
Trigger: GAGGGTACAACAGTGGCATCACAGTGACAGTGTCAT...GTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCATGACACTGTCACTGTaGTGCCACTGTTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: RSPLCNSEVQASAPTPATMTLSL*CHCCTL
Trigger: GAGGGTACAACAGTGGCATCACAGTGACAGTGTCAT...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACCGCCCAGCTCCCCATaGCACTGTCACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: FPRVGGVSYGCRAPLPGRPPSSP*HCHCDA
Trigger: GGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGG...TCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTCCGGAAGTTCACTGTCCTaGGGGTCCAGGAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: QTHRGLAGQPCHGFCLCSGSSLS*GSRNSC
Trigger: GCAGGAGTTCCTGGACCCTCAGGACAGTGAACTTCC...GGAACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTGGAAGTTCACTGTCCTaGGGGTCCAGGAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLGSSLS*GSRNSC
Trigger: GCAGGAGTTCCTGGACCCTCAGGACAGTGAACTTCC...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGATAAAAGTGATGAATaGGAGACCCCAGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QLRSPGLRSNASDPCEAQDKSDE*ETPVPG
Trigger: CCCCGGGACTGGGGTCTCTCATTCATCACTTTTATC...CTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568477.5
CDS-3UTR GCA 90 bp GACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTTCCGGTCTAACTTCCTaGCCGTGCGCGTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: DKPTGAWRGSPVMVSVFVSGLTS*PCACLG
Trigger: TCCCAGACACGCGCACGGGCAGGAAGTTAGACCGGA...AACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR GCA 90 bp GGGGTGATCAGGGCAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGGAGCTCCCACCCGTCTaGCCCTATCCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GVIRAAAYLLSCGLWSHLELPPV*PYPEGL
Trigger: CAGCCCTTCTGGATAGGGGCAGACGGGTGGGAGCTC...CAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCCTGATCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR GCA 90 bp CCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAAGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PAVSAAPSATQKSRPPLQVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...TTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTGCTTTGTCTCCTTGTaGTGGTTTTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: GGLLCPQPPLQLRSPGLRCFVSL*WFLAET
Trigger: CGTCTCTGCCAAAAACCAGCACAAGGAGACAAAGCA...GCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTTCTTGCGACTTTCTTaGCCACCCCTCCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLFLRLS*PPLLSP
Trigger: CGGGGACAGGAGGGGTGGCCAAGAAAGTCGCAAGAA...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000361909.8
ENST00000424011.6
CDS-3UTR CCA 90 bp GACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTGCAGGAAGTCCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DKPTGAWRGSPVMVSVFVAGSPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGC...AACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGCAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCGCAGGAAGTCCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GQPLTFCLVGCGLICRVPAGSPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGC...GGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR CCA 90 bp TGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: CNSEVQASAPTPATPVRRNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...GCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGGCAGCCCTGTCATaGTTTCTGTCTTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLRSPGLRSNASDPCEAQGAALS*FLSLFL
Trigger: CAGGAACAAAGACAGAAACCATGACAGGGCTGCCCC...CTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCTCATTGTCACCAAAGTaGCTGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLSLSPK*LVWAGA
Trigger: TGCTCCTGCCCACACCAGCCACTTTGGTGACAATGA...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGTCTTAGACCCAGAATaGTCATCTCACCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLAVLDPE*SSHPQK
Trigger: CTTCTGGGGGTGAGATGACCATTCTGGGTCTAAGAC...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CAA 72 bp GTCTGGGATCACTTGCTGCGGGCAACTGGGAGCAGGTaGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: VWDHLLRATGSR*QSLRKPPGSSN
Trigger: GTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCTGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR TCA 90 bp CCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCGTGGTCAACAGTGCTaGGCTGAGGGGCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRRHGFQGWEVLVMGAEPRGQQC*AEGQAW
Trigger: CCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACG...GGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPGTGAP*TKDSWK
Trigger: CTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCC...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAAATGACACTGTCACTGTaGTGCCACTGTTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: QAEPEAVGGLLCPQPPLQMTLSL*CHCCTL
Trigger: GAGGGTACAACAGTGGCATCACAGTGACAGTGTCAT...TTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGGAAGTTCACTGTCCTaGGGGTCCAGGAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GFQGWEVLVMGAEPHFLGGSSLS*GSRNSC
Trigger: GCAGGAGTTCCTGGACCCTCAGGACAGTGAACTTCC...GCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGCCCATAGACCTGCCCTaGGGTCTGGAAGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLPIDLP*GLEVHC
Trigger: ACAGTGAACTTCCAGACCTCAGGGCAGGTCTATGGG...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCACTCTGGCTCTTTTGTaGGGCCTAGAGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: GLLCPQPPLQLRSPGLRSTLALL*GLESQK
Trigger: TTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGT...GGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGGATAAAAGTGATGAATaGGAGACCTCGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: VRSPLCNSEVQASAPTPADKSDE*ETSLSP
Trigger: CGGAGACAGCGAGGTCTCTCATTCATCACTTTTATC...CGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460097.5
CDS-3UTR TCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGATAAAAGTGATGAATaGGAGACCCCCACAGCGGAC +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRDKSDE*ETPTAD
Trigger: GTCCGCTGTGGGGGTCTCTCATTCATCACTTTTATC...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566121.1
CDS-3UTR GCA 90 bp CCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCGAGCTCCCACCCGTCTaGCCCTATCCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRRHGFQGWEVLVMGAEPELPPV*PYPEGL
Trigger: CAGCCCTTCTGGATAGGGGCAGACGGGTGGGAGCTC...GGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361909.8
CDS-3UTR GCA 90 bp GACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DKPTGAWRGSPVMVSVFVGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...AACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAAGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: PAVSAAPSATQKSRPPLQGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...TTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp CAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGCTTTGTCTCCTTGTaGTGGTTTTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: QPPLQLRSPGLRSNASDPCFVSL*WFLAET
Trigger: CGTCTCTGCCAAAAACCAGCACAAGGAGACAAAGCA...GGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCTGCTTTGTCTCCTTGTaGTGGTTTTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPCFVSL*WFLAET
Trigger: CGTCTCTGCCAAAAACCAGCACAAGGAGACAAAGCA...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AAPSATQKSRPPLQRQRPIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...GGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPAGWALGRRRVWLGPPSIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...GCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGGCAGCATGGAACACCTaGTGCCCAGATACAGACAAG +
Preference number: 4 (lower is better)
Translates to: CCVRSPLCNSEVQASAPTAAWNT*CPDTDK
Trigger: CTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGC...CGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCCAGGAACTCCTGCCTaGTGGCTGGGCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: WFPRVGGVSYGCRAPLPGPGTPA*WLGSRK
Trigger: CTTCCTAGAGCCCAGCCAGCAGGCAGGAGTTCCTGG...CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTACACCCCAGCGGCTTTaGAAGCCCCATCCGAGTACT +
Preference number: 4 (lower is better)
Translates to: DKPTGAWRGSPVMVSVFVTPQRL*KPHPST
Trigger: AGTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGT...AACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCCCGAGCCCCACTTCCTaGGCGACAAGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: DTQDALIRSVVNSAELRGPSPTS*ATRQRS
Trigger: TGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGG...GCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCCATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGT +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPHGFQG*EVLVMG
Trigger: ACCCATAACTAACACCTCCCACCCTTGGAAACCATG...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAAGTCTTAGACCCAGAATaGTCATCTCACCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QAEPEAVGGLLCPQPPLQVLDPE*SSHPQK
Trigger: CTTCTGGGGGTGAGATGACCATTCTGGGTCTAAGAC...TTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCGGAAGAAGGAGGGTTTaGCTGGGCCCGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SYGCRAPLPGRQGKGQFLGRRRV*LGPPSS
Trigger: GGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCC...GAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTACCTGCCCTGAGGTCTaGAAGTTCACTGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ADKPTGAWRGSPVMVSVFTCPEV*KFTVLR
Trigger: CCTCAGGACAGTGAACTTCCAGACCTCAGGGCAGGT...AAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCAAATGCTCCAAACATaGGTCCAGAACTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAPSATQKSRPPLQRQRPQMLQT*VQNSGS
Trigger: AGAGCCAGAGTTCTGGACCCATGTTTGGAGCATTTG...GGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGCAAATGCTCCAAACATaGGTCCAGAACTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VRSPLCNSEVQASAPTPAQMLQT*VQNSGS
Trigger: AGAGCCAGAGTTCTGGACCCATGTTTGGAGCATTTG...CGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCCACACTCCAAGCAAGTaGTCAGTCTGGCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: GGLLCPQPPLQLRSPGLRHTPSK*SVWLNS
Trigger: TGAATTAAGCCAGACTGACCACTTGCTTGGAGTGTG...GCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CACTGCTGGGGTGATCAGGGCAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: HCWGDQGSRLPSVLWAVVEEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...GACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCCTGATCACCCCAGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR TCA 90 bp GCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: ADKPTGAWRGSPVMVSVFQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...AAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: EGGFGWARPAPHDTVTVMQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...CATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTCGCCAGCGACCCCTGTaGGGCGCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPASRMKRELVLLEPKILRQRPL*GAGVEA
Trigger: GGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCG...AAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGAGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SAAPSATQKSRPPLQRQRGTGAP*TKDSWK
Trigger: CTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCC...TCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DPEWSSHPQKTWFPRVGGVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AAGACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGCATGGAACACCTGCTaGCCAGATACAGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: KTPDPRHLAAWNTCCPDTAWNTC*PDTDKA
Trigger: AGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGC...TGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 4 (lower is better)
Translates to: TQNGHLTPRRHGFQGWEVGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...CACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp ACTAATTGGTCCCTGGGCTGGTTGTCTGGGATCACTTGCTGCGGGCAACTGGGAGCAGGAAGTCCATCATaGGCCAGCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TNWSLGWLSGITCCGQLGAGSPS*ASTSPA
Trigger: GGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGC...TCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGCCCAGGGACCAATTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CCA 90 bp GATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTGGTCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DALIRSVVNSAELRGKPGLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...ACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPALSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGTCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp GATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTGGTAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DALIRSVVNSAELRGKPGRAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...ACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGCCACCTAGCAGCATaGAACACCTGCTGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: WFPRVGGVSYGCRAPLPGRHLAA*NTCCPD
Trigger: ATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCG...CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAATGTCACCAAAGTGGCTaGTGTGGGCAGGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: PRVGGVSYGCRAPLPGRQCHQSG*CGQEHQ
Trigger: TTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACA...TTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGCATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGT +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRHGFQG*EVLVMG
Trigger: ACCCATAACTAACACCTCCCACCCTTGGAAACCATG...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGCATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGT +
Preference number: 4 (lower is better)
Translates to: QLRSPGLRSNASDPCEAQHGFQG*EVLVMG
Trigger: ACCCATAACTAACACCTCCCACCCTTGGAAACCATG...CTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGAGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: DPRPPPPSSMEHLLPRYRVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...TCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAACCTGCCCTGAGGTCTaGAAGTTCACTGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PRVGGVSYGCRAPLPGRQTCPEV*KFTVLR
Trigger: CCTCAGGACAGTGAACTTCCAGACCTCAGGGCAGGT...TTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCAAATGCTCCAAACATaGGTCCAGAACTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLQMLQT*VQNSGS
Trigger: AGAGCCAGAGTTCTGGACCCATGTTTGGAGCATTTG...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCCACACTCCAAGCAAGTaGTCAGTCTGGCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPHTPSK*SVWLNS
Trigger: TGAATTAAGCCAGACTGACCACTTGCTTGGAGTGTG...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTCTGTTGCAGCACTGCTaGGGTGATCAGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SRLPSVLWAVVSSAESPCLLQHC*GDQGSR
Trigger: GCGGCTGCCCTGATCACCCCAGCAGTGCTGCAACAG...ACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR TCA 90 bp GACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGAGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: DPRPPPPSSMEHLLPRYRGTGAP*TKDSWK
Trigger: CTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCC...TCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTATGACACTGTCACTGTaGTGCCACTGTTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLMTLSL*CHCCTL
Trigger: GAGGGTACAACAGTGGCATCACAGTGACAGTGTCAT...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGACTCTGGCTCTTTTGTaGGGCCTAGAGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: PLQLRSPGLRSNASDPCETLALL*GLESQK
Trigger: TTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGT...CTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCGTTACCAGTTTGTACTaGAGCCTGATACAATACCCA +
Preference number: 4 (lower is better)
Translates to: RSPLCNSEVQASAPTPATVTSLY*SLIQYP
Trigger: TGGGTATTGTATCAGGCTTCAGTACAAACTGGTAAC...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AAATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACTAACTTCCTGCCCGTaGGCGTGTCTGGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: KWGEGVGYPRCPHTQRGQLTSCP*ACLGSG
Trigger: CCCGGATCCCAGACACGCGCACGGGCAGGAAGTTAG...TTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR GCA 90 bp ACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTTCCGGTCTAACTTCCTaGCCGTGCGCGTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TWFPRVGGVSYGCRAPLPSGLTS*PCACLG
Trigger: TCCCAGACACGCGCACGGGCAGGAAGTTAGACCGGA...AGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR GCA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPAGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CACTGCTGGGGTGATCAGGGCAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: HCWGDQGSRLPSVLWAVVGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...GACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCCTGATCACCCCAGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR GCA 90 bp GTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCCGTCCGCAGCCCCCTCTaGAACTCAGAAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLWAVVSSAESPCLRNLAVRSPL*NSEVQA
Trigger: GGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC...GGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLARSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VRSPLCNSEVQASAPTPARSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...CGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTCCAGGAACTCCTGCCTaGTGGCTGGGCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: DPEWSSHPQKTWFPRVGGPGTPA*WLGSRK
Trigger: CTTCCTAGAGCCCAGCCAGCAGGCAGGAGTTCCTGG...ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAGCCCGTGCGCGTGTCTaGGATCCGGGAACCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RGNWCSLNQRFLEGSLSPARARV*DPGTQA
Trigger: CGCCTGGGTTCCCGGATCCCAGACACGCGCACGGGC...TGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR CCA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGTCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LCNSEVQASAPTPATPVRSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CCA 90 bp CTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTGGTAGGCTGAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: LIRSVVNSAELRGKPGRLNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...CAGCCTACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCTCAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGTTTGTCTCCTTGTGCTaGTTTTTGGCAGAGACGTTA +
Preference number: 4 (lower is better)
Translates to: AQAEPEAVGGLLCPQPPLFVSLC*FLAETL
Trigger: TAACGTCTCTGCCAAAAACCAGCACAAGGAGACAAA...CAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTTTTGTCTCCTTGTGCTaGTTTTTGGCAGAGACGTTA +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGFVSLC*FLAETL
Trigger: TAACGTCTCTGCCAAAAACCAGCACAAGGAGACAAA...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GATGCCACTGTTGTACCCTCTGTCTTCTGGACCAGTCAGTCTATGAGCTCTTCTAAACCCACCGGGGCCTaGCGGGGCAGCCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: DATVVPSVFWTSQSMSSSKPTGA*RGSPVM
Trigger: CATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTT...AGAAGAGCTCATAGACTGACTGGTCCAGAAGACAGAGGGTACAACAGTGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTTCATTGTCACCAAAGTaGCTGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPASLSPK*LVWAGA
Trigger: TGCTCCTGCCCACACCAGCCACTTTGGTGACAATGA...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp ACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTCCGAGCCCCACTTCCTaGGCGACAAGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TWFPRVGGVSYGCRAPLPPSPTS*ATRQRS
Trigger: TGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGG...AGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTCCGTCTTAGACCCAGAATaGTCATCTCACCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QTHRGLAGQPCHGFCLCSVLDPE*SSHPQK
Trigger: CTTCTGGGGGTGAGATGACCATTCTGGGTCTAAGAC...GGAACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AAGACCCCCGACCCCCGCCACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: KTPDPRHLAAWNTCCPDTVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...TGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCGGGGGTCGGGGGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCAGCAAGTGGTCAGTCTaGCTTAATTCATTATGGCTT +
Preference number: 4 (lower is better)
Translates to: GGLLCPQPPLQLRSPGLRSKWSV*LNSLWL
Trigger: AAGCCATAATGAATTAAGCCAGACTGACCACTTGCT...GCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGCACCTGTGGACAGGGTaGATGGGATGCATCACAGGG +
Preference number: 4 (lower is better)
Translates to: QPLTFCLVGCGLICRVPLHLWTG*MGCITG
Trigger: CCCTGTGATGCATCCCATCCACCCTGTCCACAGGTG...CAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR TCA 90 bp TGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: WGEGVGYPRCPHTQRGQQEEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...CTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp ACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: TQDALIRSVVNSAELRGKQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...CTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAATGACACTGTCACTGTaGTGCCACTGTTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: PRVGGVSYGCRAPLPGRQMTLSL*CHCCTL
Trigger: GAGGGTACAACAGTGGCATCACAGTGACAGTGTCAT...TTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTCCGCCCAGCTCCCCATaGCACTGTCACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: HLTPRRHGFQGWEVLVMGPPSSP*HCHCDA
Trigger: GGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGG...ACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp ATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGGAAGTTCACTGTCCTaGGGGTCCAGGAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: MGRRSGIPKMPSYAAWSTGSSLS*GSRNSC
Trigger: GCAGGAGTTCCTGGACCCTCAGGACAGTGAACTTCC...TGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTACTCTGGCTCTTTTGTaGGGCCTAGAGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: ADKPTGAWRGSPVMVSVFTLALL*GLESQK
Trigger: TTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGT...AAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTACCCACCGGGGCCTTTaGGAGAGCAGAGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HLTPRRHGFQGWEVLVMGTHRGL*ESRGKP
Trigger: GGGCTTTCCTCTGCTCTCTCAAAGGCCCCGGTGGGT...ACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565922.1
CDS-3UTR GCA 90 bp GCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: AAPSATQKSRPPLQRQRPQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...GGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp ACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGGCAGCATGGAACACCTaGTGCCCAGATACAGACAAG +
Preference number: 4 (lower is better)
Translates to: TQDALIRSVVNSAELRGKAAWNT*CPDTDK
Trigger: CTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGC...CTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: NSEVQASAPTPATPVRRRRSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGAAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SAAPSATQKSRPPLQRQRRSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...TCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGGGCCCATTTCAGATCTaGTTGGACAAACAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: WFPRVGGVSYGCRAPLPGGPFQI*LDKQPE
Trigger: CTCGGGCTGTTTGTCCAAGCAGATCTGAAATGGGCC...CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp AGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGCTCCGGGAGGCTGCTaGCCCAGCCTCACGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RELVLLEPKILGRVIVTKAPGGC*PSLTAH
Trigger: ATGGGCCGTGAGGCTGGGGCAGCAGCCTCCCGGAGC...TTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp TGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGACAGGGTGGATGGGATaGATCACAGGGCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: WAVVSSAESPCLRNLATSTGWMG*ITGLTP
Trigger: GGGAGTCAGCCCTGTGATGCATCCCATCCACCCTGT...CGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR GCA 90 bp CAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGGGACGGTCTGGGATCACTTGCTaGGGGCAACTGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QSLRKPPGSSNLIFAKGRSGITC*GQLGAG
Trigger: ACCTGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGA...CCGTCCCTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTAAACCCACCGGGGCCTaGCGGGGCAGCCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: GKGQFLPASRMKRELVLLKPTGA*RGSPVM
Trigger: CATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTT...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACCCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: NGEKEWDTQDALIRSVVNPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...GTTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCTGTCACCAAAGTGGCTaGTGTGGGCAGGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: PRRHGFQGWEVLVMGAEPCHQSG*CGQEHQ
Trigger: TTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACA...GGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCAGCAAGTGGTCAGTCTaGCTTAATTCATTATGGCTT +
Preference number: 4 (lower is better)
Translates to: QPPLQLRSPGLRSNASDPSKWSV*LNSLWL
Trigger: AAGCCATAATGAATTAAGCCAGACTGACCACTTGCT...GGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTAGCAAGTGGTCAGTCTaGCTTAATTCATTATGGCTT +
Preference number: 4 (lower is better)
Translates to: SEVQASAPTPATPVRRRGSKWSV*LNSLWL
Trigger: AAGCCATAATGAATTAAGCCAGACTGACCACTTGCT...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCTGTCAGGATCCACATTaGTGTTACCAGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLCQDPH*CYQFVL
Trigger: CAGTACAAACTGGTAACACCAATGTGGATCCTGACA...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGTGTCAGGATCCACATTaGTGTTACCAGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: QLRSPGLRSNASDPCEAQCQDPH*CYQFVL
Trigger: CAGTACAAACTGGTAACACCAATGTGGATCCTGACA...CTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGTTGTCTGGGATCACTTGCTGCGGGCAACTGGGAGCAGGTTGCAGAGCCTGAGTGCCAAGGGACGGGATaGGATGAGTGGCATTCATTT +
Preference number: 4 (lower is better)
Translates to: GCLGSLAAGNWEQVAEPECQGTG*DEWHSF
Trigger: AAATGAATGCCACTCATCCCATCCCGTCCCTTGGCA...CTCAGGCTCTGCAACCTGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CCA 90 bp AGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGGGACGGGATGGGATGCCTGGGCTGGTTGTCTaGGATCACTTGCTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RKPPGSSNLIFAKGRDGMPGLVV*DHLLRA
Trigger: TGCCCGCAGCAAGTGATCCCAGACAACCAGCCCAGG...CATCCCATCCCGTCCCTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CCA 90 bp GTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCCCCTTCTTCTTCACCCTaGTTCGGGCCGCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: VLWAVVSSAESPCLRNLAPSSSP*FGPLET
Trigger: GGTCTCCAGCGGCCCGAACCAGGGTGAAGAAGAAGG...GGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR TCA 90 bp GTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGATCCAAAGACCCCGGCCGTaGTGTCGGCTCCGCAACCCA +
Preference number: 4 (lower is better)
Translates to: VSSAESPCLRNLATSLKIQRPRP*CRLRNP
Trigger: TGGGTTGCGGAGCCGACATCACGGCCGGGGTCTTTG...GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR TCA 90 bp GATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCGATAAAAGTGATGAATaGGAGACCCGACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: DTQDALIRSVVNSAELRGDKSDE*ETRLGQ
Trigger: CTGGCCGAGTCGGGTCTCTCATTCATCACTTTTATC...GCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp ACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGGATAAAAGTGATGAATaGGAGACCCGACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TQDALIRSVVNSAELRGKDKSDE*ETRLGQ
Trigger: CTGGCCGAGTCGGGTCTCTCATTCATCACTTTTATC...CTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp ACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATCCGGTCTAACTTCCTaGCCGTGCGCGTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TFCLVGCGLICRVPLFEESGLTS*PCACLG
Trigger: TCCCAGACACGCGCACGGGCAGGAAGTTAGACCGGA...TTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR GCA 90 bp TCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SAAPSATQKSRPPLQRQRQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...TCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR GCA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: WDTQDALIRSVVNSAELRGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...CCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GNWCSLNQRFLEGSLSPKLCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...CTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTCTGTGTGGCTCAGGTTaGCAAGGCACCCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LVLLEPKILGRVIVTKVALCGSG*QGTRQA
Trigger: GGCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAG...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCCCAGGAACTCCTGCCTaGTGGCTGGGCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: CLVGCGLICRVPLFEEFGPGTPA*WLGSRK
Trigger: CTTCCTAGAGCCCAGCCAGCAGGCAGGAGTTCCTGG...GCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp CAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGGGCCCATTTCAGATCTaGTTGGACAAACAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: QPLTFCLVGCGLICRVPLGPFQI*LDKQPE
Trigger: CTCGGGCTGTTTGTCCAAGCAGATCTGAAATGGGCC...CAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR GCA 90 bp CAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGGGACGGTTGTCTGGGATCACTTaGTGCGGGCAACTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QSLRKPPGSSNLIFAKGRLSGIT*CGQLGA
Trigger: TGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGACAA...CCGTCCCTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CCA 90 bp AGCAGGTTGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCACACCCCAGCGGCTTTaGAAGCCCCATCCGAGTACT +
Preference number: 4 (lower is better)
Translates to: SRLQSLRKPPGSSNLIFATPQRL*KPHPST
Trigger: AGTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGT...GGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CCA 90 bp TGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGGAGGCCTGTGTaGCTCAGGTTGCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: WSSHPQKTWFPRVGGVSYGWRPV*LRLPRH
Trigger: GTGCCTTGGCAACCTGAGCCACACAGGCCTCCACCC...ATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SHPQKTWFPRVGGVSYGCPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...GCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp ACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: TQDALIRSVVNSAELRGKVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...CTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGAAGAAGGAGGGTTTaGCTGGGCCCGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVLLEPKILGRVIVTKVAGRRRV*LGPPSS
Trigger: GGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCC...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCACCTGCCCTGAGGTCTaGAAGTTCACTGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SYGCRAPLPGRQGKGQFLTCPEV*KFTVLR
Trigger: CCTCAGGACAGTGAACTTCCAGACCTCAGGGCAGGT...GAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAATGTCAGGATCCACATTaGTGTTACCAGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: PAVSAAPSATQKSRPPLQCQDPH*CYQFVL
Trigger: CAGTACAAACTGGTAACACCAATGTGGATCCTGACA...TTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GCTGGTTGTCTGGGATCACTTGCTGCGGGCAACTGGGAGCAGGTTGCAGAGCCTCAGAAGGACGGTTTCTaGGATTCACAAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: AGCLGSLAAGNWEQVAEPQKDGF*DSQIPM
Trigger: CATGGGGATTTGTGAATCCCAGAAACCGTCCTTCTG...AGGCTCTGCAACCTGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CCA 90 bp AGGTTGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGCTTGCTGCGGGCAACTaGGAGCAGGTTGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RLQSLRKPPGSSNLIFAKLAAGN*EQVAEP
Trigger: AGGCTCTGCAACCTGCTCCCAGTTGCCCGCAGCAAG...CTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR TCA 90 bp ACTAATTGGTCCCTGGGCTGGTTGTCTGGGATCACTTGCTGCGGGCAACTGGGAGATAAAAGTGATGAATaGGAGACCCGACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TNWSLGWLSGITCCGQLGDKSDE*ETRLGQ
Trigger: CTGGCCGAGTCGGGTCTCTCATTCATCACTTTTATC...TCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGCCCAGGGACCAATTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR TCA 90 bp AGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGGGACGGGATGGGATGGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RKPPGSSNLIFAKGRDGMEEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...CATCCCATCCCGTCCCTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR TCA 90 bp AAATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAAGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: KWGEGVGYPRCPHTQRGQEEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...TTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGGGACGGCAGAGTCCCCTTGTTTaGGGAATTTGGCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: QSLRKPPGSSNLIFAKGRQSPLV*GIWPRR
Trigger: ACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG...CCGTCCCTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR TCA 90 bp TGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGATGACACTGTCACTGTaGTGCCACTGTTGTACCCTC +
Preference number: 4 (lower is better)
Translates to: WGEGVGYPRCPHTQRGQQMTLSL*CHCCTL
Trigger: GAGGGTACAACAGTGGCATCACAGTGACAGTGTCAT...CTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp AAATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACCCATAGACCTGCCCTaGGGTCTGGAAGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: KWGEGVGYPRCPHTQRGQPIDLP*GLEVHC
Trigger: ACAGTGAACTTCCAGACCTCAGGGCAGGTCTATGGG...TTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCCCATAGACCTGCCCTaGGGTCTGGAAGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: SHPQKTWFPRVGGVSYGCPIDLP*GLEVHC
Trigger: ACAGTGAACTTCCAGACCTCAGGGCAGGTCTATGGG...GCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGAACTCTGGCTCTTTTGTaGGGCCTAGAGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: FPRVGGVSYGCRAPLPGRTLALL*GLESQK
Trigger: TTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGT...TCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AGGTTGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RLQSLRKPPGSSNLIFAKGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...CTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR GCA 90 bp GGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGCCACAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: GGFGWARPAPHDTVTVMPQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...TGGCATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCTGCTTTGTCTCCTTGTaGTGGTTTTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: DTQDALIRSVVNSAELRGCFVSL*WFLAET
Trigger: CGTCTCTGCCAAAAACCAGCACAAGGAGACAAAGCA...GCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GCCAGGCCTTCAGTCAGAGTCCGAGTCGGAATTCTCTTCTTCTGTCTTGTGGGCGCATGGAACACCTGCTaGCCAGATACAGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: ARPSVRVRVGILFFCLVGAWNTC*PDTDKA
Trigger: AGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGC...GCCCACAAGACAGAAGAAGAGAATTCCGACTCGGACTCTGACTGAAGGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp ACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGCAGCATGGAACACCTaGTGCCCAGATACAGACAAG +
Preference number: 4 (lower is better)
Translates to: TWFPRVGGVSYGCRAPLPAAWNT*CPDTDK
Trigger: CTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGC...AGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGGCAGCATGGAACACCTaGTGCCCAGATACAGACAAG +
Preference number: 4 (lower is better)
Translates to: TQNGHLTPRRHGFQGWEVAAWNT*CPDTDK
Trigger: CTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGC...CACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AGCTGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATATCCAGGCCTCGGTCCTaGACCCGCCTCCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: SCQDPHWCYQFVLKPDTISRPRS*TRLPQP
Trigger: GGGTTGGGGGAGGCGGGTGCAGGACCGAGGCCTGGA...TATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424011.6
CDS-3UTR CCA 90 bp CGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RLPSVLWAVVSSAESPCLLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...CAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR CCA 90 bp CACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HLAAWNTCCPDTDKALLCRAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...ACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTCCTTTGTCTCCTTGTGCTaGTTTTTGGCAGAGACGTTA +
Preference number: 4 (lower is better)
Translates to: QTHRGLAGQPCHGFCLCSFVSLC*FLAETL
Trigger: TAACGTCTCTGCCAAAAACCAGCACAAGGAGACAAA...GGAACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTAAACCCACCGGGGCCTaGCGGGGCAGCCCTGTCATG +
Preference number: 4 (lower is better)
Translates to: RMKRELVLLEPKILGRVIKPTGA*RGSPVM
Trigger: CATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTT...AATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCTGTCACCAAAGTGGCTaGTGTGGGCAGGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: SHPQKTWFPRVGGVSYGCCHQSG*CGQEHQ
Trigger: TTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACA...GCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTTGTCACCAAAGTGGCTaGTGTGGGCAGGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: HLAAWNTCCPDTDKALLCCHQSG*CGQEHQ
Trigger: TTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACA...ACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GATACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCCATGGTTTCCAAGGGTaGGAGGTGTTAGTTATGGGT +
Preference number: 4 (lower is better)
Translates to: DTQDALIRSVVNSAELRGHGFQG*EVLVMG
Trigger: ACCCATAACTAACACCTCCCACCCTTGGAAACCATG...GCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTCACCCCCAGAAGACATaGTTTCCAAGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HLAAWNTCCPDTDKALLCHPQKT*FPRVGG
Trigger: ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTG...ACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATCTCCTGCCTGCTGGCTaGGCTCTAGGAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: WSSHPQKTWFPRVGGVSYLLPAG*ALGRRR
Trigger: CCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAGGAG...ATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGGTGATCAGGGCAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCATTTCAGATCTGCTTaGACAAACAGCCCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GVIRAAAYLLSCGLWSHLHFRSA*TNSPSV
Trigger: GACACTCGGGCTGTTTGTCCAAGCAGATCTGAAATG...CAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTGCCCTGATCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565666.5
3UTR CAA 72 bp TTTCCACTGACGTTTACTAATTGGTCCCTGGGCTGGTaGTCTGGGATCACTTGCTGCGGGCAACTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: FPLTFTNWSLGW*SGITCCGQLGA
Trigger: TGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGCCCAGGGACCAATTAGTAAACGTCAGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR TCA 90 bp GAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGGTTTGTACTGAAGCCTaGTACAATACCCAACAGTAT +
Preference number: 4 (lower is better)
Translates to: EGGFGWARPAPHDTVTVMVCTEA*YNTQQY
Trigger: ATACTGTTGGGTATTGTATCAGGCTTCAGTACAAAC...CATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACGTTACCAGTTTGTACTaGAGCCTGATACAATACCCA +
Preference number: 4 (lower is better)
Translates to: FQGWEVLVMGAEPHFLGDVTSLY*SLIQYP
Trigger: TGGGTATTGTATCAGGCTTCAGTACAAACTGGTAAC...GTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: EGGFGWARPAPHDTVTVMQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...CATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPARSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTCCAGGAACTCCTGCCTaGTGGCTGGGCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LVLLEPKILGRVIVTKVAPGTPA*WLGSRK
Trigger: CTTCCTAGAGCCCAGCCAGCAGGCAGGAGTTCCTGG...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCACCAGGAACTCCTGCCTaGTGGCTGGGCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGNWCSLNQRFLEGSLSPPGTPA*WLGSRK
Trigger: CTTCCTAGAGCCCAGCCAGCAGGCAGGAGTTCCTGG...TGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCTCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: PRRHGFQGWEVLVMGAEPSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...GGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTTTTGTCTCCTTGTGCTaGTTTTTGGCAGAGACGTTA +
Preference number: 4 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPAFVSLC*FLAETL
Trigger: TAACGTCTCTGCCAAAAACCAGCACAAGGAGACAAA...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATCGCCACCTAGCAGCATaGAACACCTGCTGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: WSSHPQKTWFPRVGGVSYRHLAA*NTCCPD
Trigger: ATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTGGCG...ATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp ACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGGTCTTAGACCCAGAATaGTCATCTCACCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TPRRHGFQGWEVLVMGAEVLDPE*SSHPQK
Trigger: CTTCTGGGGGTGAGATGACCATTCTGGGTCTAAGAC...CTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGGTCTTAGACCCAGAATaGTCATCTCACCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TQNGHLTPRRHGFQGWEVVLDPE*SSHPQK
Trigger: CTTCTGGGGGTGAGATGACCATTCTGGGTCTAAGAC...CACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp ACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGGTACCCTCTGTCTTCTaGACCAGTCAGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: TQNGHLTPRRHGFQGWEVVPSVF*TSQSMS
Trigger: GCTCATAGACTGACTGGTCCAGAAGACAGAGGGTAC...CACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGGAAGAAGGAGGGTTTaGCTGGGCCCGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RMKRELVLLEPKILGRVIGRRRV*LGPPSS
Trigger: GGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCC...AATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTCTCCTGCCTGCTGGCTaGGCTCTAGGAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GKGQFLPASRMKRELVLLLLPAG*ALGRRR
Trigger: CCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAGGAG...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTTGTCAGGATCCACATTaGTGTTACCAGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPACQDPH*CYQFVL
Trigger: CAGTACAAACTGGTAACACCAATGTGGATCCTGACA...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGCAGGTTGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAATTGGTCCCTGGGCTaGTTGTCTGGGATCACTTGC +
Preference number: 4 (lower is better)
Translates to: SRLQSLRKPPGSSNLIFANWSLG*LSGITC
Trigger: GCAAGTGATCCCAGACAACCAGCCCAGGGACCAATT...GGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR TCA 90 bp TGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: WSSHPQKTWFPRVGGVSYEEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...ATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTGTTTGTACTGAAGCCTaGTACAATACCCAACAGTAT +
Preference number: 4 (lower is better)
Translates to: DKPTGAWRGSPVMVSVFVVCTEA*YNTQQY
Trigger: ATACTGTTGGGTATTGTATCAGGCTTCAGTACAAAC...AACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAGTTTGTACTGAAGCCTaGTACAATACCCAACAGTAT +
Preference number: 4 (lower is better)
Translates to: PRVGGVSYGCRAPLPGRQVCTEA*YNTQQY
Trigger: ATACTGTTGGGTATTGTATCAGGCTTCAGTACAAAC...TTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAACACGATGGTGATGCATCACAGGGCTaGCTCCCTGCTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EFGHVVKDQVEISCKHDGDASQG*LPAPGG
Trigger: GCCTCCCGGAGCAGGGAGTCAGCCCTGTGATGCATC...ACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR TCA 90 bp AGGTTGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGAGGGACGGGATGGGATaGGTGGCATTCATTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RLQSLRKPPGSSNLIFAKRDGMG*VAFIFS
Trigger: GCTGAAAATGAATGCCACTCATCCCATCCCGTCCCT...CTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR GCA 90 bp GATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTGGTCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: DALIRSVVNSAELRGKPGQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...ACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: GFQGWEVLVMGAEPHFLGQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...GCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCGCAGCATGGAACACCTaGTGCCCAGATACAGACAAG +
Preference number: 4 (lower is better)
Translates to: CLVGCGLICRVPLFEEFGAAWNT*CPDTDK
Trigger: CTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGC...GCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp AAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATGGGTCCAGGGCAGGAGCACCAAGTaGAGACAAACCCACCGGGGC +
Preference number: 4 (lower is better)
Translates to: KRFTRKRIRLQMLQTWVQGRSTK*RQTHRG
Trigger: GCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCC...CTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTGGTGTTAGTTATGGGTaGCGAGCCCCACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GKGQFLPASRMKRELVLLGVSYG*RAPLPG
Trigger: CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACC...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TTGTTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAAGCTCCGGGAGGCTGCTaGCCCAGCCTCACGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LFEEFGHVVKDQVEISCKAPGGC*PSLTAH
Trigger: ATGGGCCGTGAGGCTGGGGCAGCAGCCTCCCGGAGC...TTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR GCA 90 bp GGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAACACGATGGTAGCAAACCCCTGTTGCAGCACTaGTGGGGTGATCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHVVKDQVEISCKHDGSKPLLQH*WGDQGS
Trigger: GCTGCCCTGATCACCCCAGCAGTGCTGCAACAGGGG...TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR CCA 90 bp TCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGTGTGGCCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLNQRFLEGSLSPKWLVWPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...CCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTCCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: GKGQFLPASRMKRELVLLPKWLV*AGAPSA
Trigger: TGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGG...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTTCATTGTCACCAAAGTaGCTGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HLTPRRHGFQGWEVLVMGSLSPK*LVWAGA
Trigger: TGCTCCTGCCCACACCAGCCACTTTGGTGACAATGA...ACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GATGCCACTGTTGTACCCTCTGTCTTCTGGACCAGTCAGTCTATGAGCTCTTCTCACCCCCAGAAGACATaGTTTCCAAGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: DATVVPSVFWTSQSMSSSHPQKT*FPRVGG
Trigger: ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTG...AGAAGAGCTCATAGACTGACTGGTCCAGAAGACAGAGGGTACAACAGTGGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCCAAATGCTCCAAACATaGGTCCAGAACTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LTPRRHGFQGWEVLVMGAQMLQT*VQNSGS
Trigger: AGAGCCAGAGTTCTGGACCCATGTTTGGAGCATTTG...GGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTAGCAAGTGGTCAGTCTaGCTTAATTCATTATGGCTT +
Preference number: 4 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPASKWSV*LNSLWL
Trigger: AAGCCATAATGAATTAAGCCAGACTGACCACTTGCT...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTGGTAGGCTGAGCAAGTGGTCAGTCTaGCTTAATTCATTATGGCTT +
Preference number: 4 (lower is better)
Translates to: LIRSVVNSAELRGKPGRLSKWSV*LNSLWL
Trigger: AAGCCATAATGAATTAAGCCAGACTGACCACTTGCT...CAGCCTACCAGGCTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGATGTCAGGATCCACATTaGTGTTACCAGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: FPRVGGVSYGCRAPLPGRCQDPH*CYQFVL
Trigger: CAGTACAAACTGGTAACACCAATGTGGATCCTGACA...TCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTCAAAGACCCCGGCCGTaGTGTCGGCTCCGCAACCCA +
Preference number: 4 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSQRPRP*CRLRNP
Trigger: TGGGTTGCGGAGCCGACATCACGGCCGGGGTCTTTG...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
CDS-3UTR GCA 90 bp CACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLAAWNTCCPDTDKALLCIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...ACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATGGGTCCAGCCAGGAACTCCTGCCTaGTGGCTGGGCTCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRFTRKRIRLQMLQTWVQPGTPA*WLGSRK
Trigger: CTTCCTAGAGCCCAGCCAGCAGGCAGGAGTTCCTGG...CTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAACACCCCAGCGGCTTTaGAAGCCCCATCCGAGTACT +
Preference number: 4 (lower is better)
Translates to: RELVLLEPKILGRVIVTKTPQRL*KPHPST
Trigger: AGTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGT...TTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTTCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: HLAAWNTCCPDTDKALLCSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...ACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AAATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAATCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: KWGEGVGYPRCPHTQRGQSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...TTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCTTTGTCTCCTTGTGCTaGTTTTTGGCAGAGACGTTA +
Preference number: 4 (lower is better)
Translates to: PRRHGFQGWEVLVMGAEPFVSLC*FLAETL
Trigger: TAACGTCTCTGCCAAAAACCAGCACAAGGAGACAAA...GGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTCACCCCCAGAAGACATaGTTTCCAAGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKGQFLPASRMKRELVLLHPQKT*FPRVGG
Trigger: ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTG...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGATCCACCCCCAGAAGACATaGTTTCCAAGGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VSSAESPCLRNLATSLKIHPQKT*FPRVGG
Trigger: ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTG...GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR CCA 90 bp GACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTCACACTCCAAGCAAGTaGTCAGTCTGGCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: DPEWSSHPQKTWFPRVGGHTPSK*SVWLNS
Trigger: TGAATTAAGCCAGACTGACCACTTGCTTGGAGTGTG...ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGGGACGGGATGGGATGTTACTAATTGGTCCCTaGGCTGGTTGTCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: RKPPGSSNLIFAKGRDGMLLIGP*AGCLGS
Trigger: TGATCCCAGACAACCAGCCCAGGGACCAATTAGTAA...CATCCCATCCCGTCCCTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR GCA 90 bp AGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RMKRELVLLEPKILGRVIGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...AATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPLFEEFGHVVKDQVEISGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...ACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR GCA 90 bp TCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGTGTGGGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SLNQRFLEGSLSPKWLVWGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...CCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGATCGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VSSAESPCLRNLATSLKIGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR GCA 90 bp CTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGTGGGATACCCAAGATaGCCTCATACGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LPASRMKRELVLLEPKILVGYPR*PHTQRG
Trigger: ACCACGCTGCGTATGAGGGCATCTTGGGTATCCCAC...AAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATACCCGGTGTTAGTTATGGGTaGCGAGCCCCACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CQDPHWCYQFVLKPDTIPGVSYG*RAPLPG
Trigger: CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACC...GGGTATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATACCCTTCTTGCGACTTTCTTaGCCACCCCTCCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: CQDPHWCYQFVLKPDTIPFLRLS*PPLLSP
Trigger: CGGGGACAGGAGGGGTGGCCAAGAAAGTCGCAAGAA...GGGTATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361909.8
ENST00000424011.6
CDS-3UTR CCA 90 bp AGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTACACCCCAGCGGCTTTaGAAGCCCCATCCGAGTACT +
Preference number: 4 (lower is better)
Translates to: RMKRELVLLEPKILGRVITPQRL*KPHPST
Trigger: AGTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGT...AATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TGCCACTGTTGTACCCTCTGTCTTCTGGACCAGTCAGTCTATGAGCTCTTCTTTAATGGGGAGAAGGAGTaGGATACCCAAGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: CHCCTLCLLDQSVYELFFNGEKE*DTQDAL
Trigger: GAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT...AAAGAAGAGCTCATAGACTGACTGGTCCAGAAGACAGAGGGTACAACAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPASRMKRELVLLEPKILRAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...AAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAACCTGCCCTGAGGTCTaGAAGTTCACTGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RELVLLEPKILGRVIVTKTCPEV*KFTVLR
Trigger: CCTCAGGACAGTGAACTTCCAGACCTCAGGGCAGGT...TTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
3UTR CAA 72 bp TGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCACGTCGTTAAAGATCAG +
Preference number: 4 (lower is better)
Translates to: CLVGCGLICRVP*FEEFGHVVKDQ
Trigger: CTGATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR TCA 90 bp AGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGAGGAAGGCAGATGCTaGGGACGCCACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RMKRELVLLEPKILGRVIEEGRC*GRHIAD
Trigger: ATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTC...AATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp AAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATGGGTCCAGCCCATAGACCTGCCCTaGGGTCTGGAAGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: KRFTRKRIRLQMLQTWVQPIDLP*GLEVHC
Trigger: ACAGTGAACTTCCAGACCTCAGGGCAGGTCTATGGG...CTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAACACGATGGTGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EFGHVVKDQVEISCKHDGGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...ACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR CCA 90 bp TCTAACCTAATATTTGCCAAGGGACGGGATGGGATGAGTGGCATTCATTTTCAGCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SNLIFAKGRDGMSGIHFQLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...CTGAAAATGAATGCCACTCATCCCATCCCGTCCCTTGGCAAATATTAGGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CCA 90 bp AATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTTCTTCTTCTGTCTTGTaGGCTGTGGTCTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: NGHLTPRRHGFQGWEVLVSSSVL*AVVSSA
Trigger: TGCAGATGAGACCACAGCCCACAAGACAGAAGAAGA...AACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp CTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGGGCAGCCCTGTCATaGTTTCTGTCTTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPASRMKRELVLLEPKILGAALS*FLSLFL
Trigger: CAGGAACAAAGACAGAAACCATGACAGGGCTGCCCC...AAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TTTCAGGGTAAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACACTCCTGCCTGCTGGCTaGGCTCTAGGAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FQGKRFTRKRIRLQMLQTLLPAG*ALGRRR
Trigger: CCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAGGAG...TGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTTACCCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GATGCCACTGTTGTACCCTCTGTCTTCTGGACCAGTCAGTCTATGAGCTCTTCTCATTTCAGATCTGCTTaGACAAACAGCCCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: DATVVPSVFWTSQSMSSSHFRSA*TNSPSV
Trigger: GACACTCGGGCTGTTTGTCCAAGCAGATCTGAAATG...AGAAGAGCTCATAGACTGACTGGTCCAGAAGACAGAGGGTACAACAGTGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR TCA 90 bp CAAACATGGGTCCAGAACTCTGGCTCTTTTGTGAGGCCTAGAGTCACAGAAAATGATAAAAGTGATGAATaGGAGACCCGACTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QTWVQNSGSFVRPRVTENDKSDE*ETRLGQ
Trigger: CTGGCCGAGTCGGGTCTCTCATTCATCACTTTTATC...ATTTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGTTCTGGACCCATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTGGAACTGGTGCTCCTTaGACCAAAGATTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GKGQFLPASRMKRELVLLGTGAP*TKDSWK
Trigger: CTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCC...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TCTAACCTAATATTTGCCAAGGGACGGGATGGGATGAGTGGCATTCATTTTCAGGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SNLIFAKGRDGMSGIHFQGCGLI*RVPLFE
Trigger: CTCAAACAAGGGGACTCTGCAGATGAGACCACAGCC...CTGAAAATGAATGCCACTCATCCCATCCCGTCCCTTGGCAAATATTAGGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR GCA 90 bp TTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FCLVGCGLICRVPLFEEFIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...AAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp AAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATGGGTCCAGGCATGGAACACCTGCTaGCCAGATACAGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: KRFTRKRIRLQMLQTWVQAWNTC*PDTDKA
Trigger: AGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGC...CTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAACACGATGGTCTGTCTTGTGGGCTGTaGTCTCATCTGCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: EFGHVVKDQVEISCKHDGLSCGL*SHLQSP
Trigger: GGGACTCTGCAGATGAGACCACAGCCCACAAGACAG...ACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR CCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTCAAATGCTCCAAACATaGGTCCAGAACTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GKGQFLPASRMKRELVLLQMLQT*VQNSGS
Trigger: AGAGCCAGAGTTCTGGACCCATGTTTGGAGCATTTG...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp AAGTTTCCACTGACGTTTACTAATTGGTCCCTGGGCTGGTTGTCTGGGATCACTCTGACGTTTACTAATTaGTCCCTGGGCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KFPLTFTNWSLGWLSGITLTFTN*SLGWLS
Trigger: AGACAACCAGCCCAGGGACCAATTAGTAAACGTCAG...AGTGATCCCAGACAACCAGCCCAGGGACCAATTAGTAAACGTCAGTGGAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR GCA 90 bp TTCACGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FTCIFAKTESCQDPHWCYGQHKP*HLSFSC
Trigger: GCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCC...GTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AGGTTGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: RLQSLRKPPGSSNLIFAKQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...CTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR GCA 90 bp AGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAATGCTTTGTCTCCTTGTaGTGGTTTTTGGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: RELVLLEPKILGRVIVTKCFVSL*WFLAET
Trigger: CGTCTCTGCCAAAAACCAGCACAAGGAGACAAAGCA...TTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp AGCTGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATAGCATGGAACACCTGCTaGCCAGATACAGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: SCQDPHWCYQFVLKPDTIAWNTC*PDTDKA
Trigger: AGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGC...TATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CCA 90 bp TTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAACACAGGGCTGAAGGCCTGTaGGACAGAAATGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FEEFGHVVKDQVEISCKHRAEGL*DRNGEK
Trigger: CTTCTCCCCATTTCTGTCCCACAGGCCTTCAGCCCT...GTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR CCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTACCTGCCCTGAGGTCTaGAAGTTCACTGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSTCPEV*KFTVLR
Trigger: CCTCAGGACAGTGAACTTCCAGACCTCAGGGCAGGT...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR CCA 90 bp GGCAAAGGTCAATTTCTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTCACACTCCAAGCAAGTaGTCAGTCTGGCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: GKGQFLPASRMKRELVLLHTPSK*SVWLNS
Trigger: TGAATTAAGCCAGACTGACCACTTGCTTGGAGTGTG...AAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCTTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAACACGATGGTAGCAAAACTCTGGCTCTTTTGTaGGGCCTAGAGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: GHVVKDQVEISCKHDGSKTLALL*GLESQK
Trigger: TTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGT...TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR TCA 90 bp TCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGTGTGGGTTACCAGTTTGTACTaGAGCCTGATACAATACCCA +
Preference number: 4 (lower is better)
Translates to: SLNQRFLEGSLSPKWLVWVTSLY*SLIQYP
Trigger: TGGGTATTGTATCAGGCTTCAGTACAAACTGGTAAC...CCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGGTTACCAGTTTGTACTaGAGCCTGATACAATACCCA +
Preference number: 4 (lower is better)
Translates to: GNWCSLNQRFLEGSLSPKVTSLY*SLIQYP
Trigger: TGGGTATTGTATCAGGCTTCAGTACAAACTGGTAAC...CTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp TGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATACCCATACAGACAAGGCTCTaGTTTGTCTCCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CQDPHWCYQFVLKPDTIPIQTRL*FVSLCW
Trigger: CCAGCACAAGGAGACAAAGCAGAGCCTTGTCTGTAT...GGGTATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTGCATGGAACACCTGCTaGCCAGATACAGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSAWNTC*PDTDKA
Trigger: AGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGC...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR TCA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGTTTGTACTGAAGCCTaGTACAATACCCAACAGTAT +
Preference number: 4 (lower is better)
Translates to: LVLLEPKILGRVIVTKVAVCTEA*YNTQQY
Trigger: ATACTGTTGGGTATTGTATCAGGCTTCAGTACAAAC...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR GCA 90 bp GAAATCAGTTGCAAACACGATGGTAGCAAAGAAGCCAAACACCTGTGGACAGGGCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: EISCKHDGSKEAKHLWTGQVEIS*KHDGSK
Trigger: TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTG...CCCTGTCCACAGGTGTTTGGCTTCTTTGCTACCATCGTGTTTGCAACTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR CCA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTGTCTTAGACCCAGAATaGTCATCTCACCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSVLDPE*SSHPQK
Trigger: CTTCTGGGGGTGAGATGACCATTCTGGGTCTAAGAC...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR TCA 90 bp TGTCAGGATCCACATTGGTGTTACCAGTTTGTACTGAAGCCTGATACAATACCCGTTACCAGTTTGTACTaGAGCCTGATACAATACCCA +
Preference number: 4 (lower is better)
Translates to: CQDPHWCYQFVLKPDTIPVTSLY*SLIQYP
Trigger: TGGGTATTGTATCAGGCTTCAGTACAAACTGGTAAC...GGGTATTGTATCAGGCTTCAGTACAAACTGGTAACACCAATGTGGATCCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR TCA 90 bp GGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAACACGATGGTAGCAAAGTTTGTACTGAAGCCTaGTACAATACCCAACAGTAT +
Preference number: 4 (lower is better)
Translates to: GHVVKDQVEISCKHDGSKVCTEA*YNTQQY
Trigger: ATACTGTTGGGTATTGTATCAGGCTTCAGTACAAAC...TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR GCA 90 bp TTCACGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACAGGTCAATTTCTCCCTaGTTCAAGAATGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FTCIFAKTESCQDPHWCYRSISP*FKNEEG
Trigger: TCCCTCTTCATTCTTGAAGCAGGGAGAAATTGACCT...GTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: VQASAPTPATPVRRRGGGPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...GCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGCCCCATCCGAGTACTaGGCGATGGCCGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: PGLRSNASDPCEAQGWRPAPSEY*AMAVME
Trigger: CTCCATCACGGCCATCGCCAAGTACTCGGATGGGGC...AGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp GGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GGLLCPQPPLQLRSPGLRPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...GCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS CCA 90 bp GGGAAGCGGAAACCCGGGCTTCTTCTTCACCCTGGTTCGGGCCGCTaGAGACCTCCCGATCACCGCCCCGGCACCCCTTCGGAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GKRKPGLLLHPGSGR*RPPDHRPGTPSELP
Trigger: TGGGAGCTCCGAAGGGGTGCCGGGGCGGTGATCGGGAGGTCTCCAGCGGCCCGAACCAGGGTGAAGAAGAAGCCCGGGTTTCCGCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361909.8
CDS-3UTR CAA 90 bp TGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: CWLGSRKKEGLAGPAQLPPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...GGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGTCCAGGGCCTCTTTGTaGGCTGTTCCAGGCCTCGGT +
Preference number: 5 (lower is better)
Translates to: QASAPTPATPVRRRGGGLSRASL*AVPGLG
Trigger: ACCGAGGCCTGGAACAGCCAACAAAGAGGCCCTGGA...CAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424011.6
CDS-3UTR CAA 90 bp AGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: SPLCNSEVQASAPTPATPPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...AGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGAACACCCCAGCGGCTTaGGAAGCCCCATCCGAGTAC +
Preference number: 5 (lower is better)
Translates to: LRSPGLRSNASDPCEAQGNTPAA*EAPSEY
Trigger: GTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGTT...CCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LCNSEVQASAPTPATPVRPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS GCA 90 bp CCTCCCGATCACCGCCCCGGCACCCCTTCGGAGCTCCCACCCGTCTaGCCCTATCCAGAAGGGCTGTCTATACTCGCTGTCTCCGGTCTA +
Preference number: 5 (lower is better)
Translates to: PPDHRPGTPSELPPV*PYPEGLSILAVSGL
Trigger: TAGACCGGAGACAGCGAGTATAGACAGCCCTTCTGGATAGGGGCAGACGGGTGGGAGCTCCGAAGGGGTGCCGGGGCGGTGATCGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361909.8
ENST00000565666.5
CDS-3UTR CAA 90 bp CAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGCCCCATCCGAGTACTaGGCGATGGCCGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: QLRSPGLRSNASDPCEAQAPSEY*AMAVME
Trigger: CTCCATCACGGCCATCGCCAAGTACTCGGATGGGGC...CTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCAACACCCCAGCGGCTTaGGAAGCCCCATCCGAGTAC +
Preference number: 5 (lower is better)
Translates to: RSPLCNSEVQASAPTPATNTPAA*EAPSEY
Trigger: GTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGTT...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp GAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: EGGFGWARPAPHDTVTVMPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...CATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS GCA 90 bp CTCCCCTCTTCTCGCGCCCGGAGGGAAGCGGAAACCCGGGCCGTCTaGCCCTATCCAGAAGGGCTGTCTATACTCGCTGTCTCCGGTCTA +
Preference number: 5 (lower is better)
Translates to: LPSSRARREAETRAV*PYPEGLSILAVSGL
Trigger: TAGACCGGAGACAGCGAGTATAGACAGCCCTTCTGGATAGGGGCAGACGGCCCGGGTTTCCGCTTCCCTCCGGGCGCGAGAAGAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424011.6
CDS-3UTR CAA 90 bp AGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTAGCAGGAGGCGGCCTTaGAGAGAGCAGAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: SPLCNSEVQASAPTPATPSRRRP*REQRKA
Trigger: GGCTTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCT...AGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp TCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGAAACACCCCAGCGGCTTaGGAAGCCCCATCCGAGTAC +
Preference number: 5 (lower is better)
Translates to: SAAPSATQKSRPPLQRQRNTPAA*EAPSEY
Trigger: GTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGTT...TCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGACTGTGATGCCACTGTaGTACCCTCTGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: QASAPTPATPVRRRGGGLTVMPL*YPLSSG
Trigger: TCCAGAAGACAGAGGGTACAACAGTGGCATCACAGT...CAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS GCA 90 bp CCTGCACCCGCCTCCCCCAACCCATTCTCAGAGGACTCTCAGACCTaGAAGCGCAGCTCCAGGCACACACACAGACACACACACACGCGC +
Preference number: 5 (lower is better)
Translates to: PAPASPNPFSEDSQT*KRSSRHTHRHTHTR
Trigger: GCGCGTGTGTGTGTGTCTGTGTGTGTGCCTGGAGCTGCGCTTGCAGGTCTGAGAGTCCTCTGAGAATGGGTTGGGGGAGGCGGGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424011.6
ENST00000562357.5
CDS GCA 90 bp ACCCTCCTCCAGGGCCTCTTTGTTGGCTGTTCCAGGCCTCGGTCCTaGACCCGCCTCCCCCAACCCATTCTCAGAGGACTCTCAGACCTG +
Preference number: 5 (lower is better)
Translates to: TLLQGLFVGCSRPRS*TRLPQPILRGLSDL
Trigger: CAGGTCTGAGAGTCCTCTGAGAATGGGTTGGGGGAGGCGGGTGCAGGACCGAGGCCTGGAACAGCCAACAAAGAGGCCCTGGAGGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424011.6
ENST00000562357.5
CDS-3UTR CAA 90 bp CCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAAAGCAGGAGGCGGCCTTaGAGAGAGCAGAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: PAVSAAPSATQKSRPPLQSRRRP*REQRKA
Trigger: GGCTTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCT...TTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGGCCCCATCCGAGTACTaGGCGATGGCCGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLAPSEY*AMAVME
Trigger: CTCCATCACGGCCATCGCCAAGTACTCGGATGGGGC...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGAACACCCCAGCGGCTTaGGAAGCCCCATCCGAGTAC +
Preference number: 5 (lower is better)
Translates to: LCNSEVQASAPTPATPVRNTPAA*EAPSEY
Trigger: GTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGTT...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566121.1
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: QASAPTPATPVRRRGGGLPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...CAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: PGLRSNASDPCEAQGWRPPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...AGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp GGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTGGAGGCCTGTGCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: GLRSNASDPCEAQGWRPVPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...CACAGGCCTCCACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp TGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGGCCCCATCCGAGTACTaGGCGATGGCCGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: WFPRVGGVSYGCRAPLPGAPSEY*AMAVME
Trigger: CTCCATCACGGCCATCGCCAAGTACTCGGATGGGGC...CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCCCTGCTAACACCCCAGCGGCTTaGGAAGCCCCATCCGAGTAC +
Preference number: 5 (lower is better)
Translates to: GCRAPLPGRQGKGQFLPANTPAA*EAPSEY
Trigger: GTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGTT...AGCAGGGAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR CAA 90 bp TCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGGGTATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SEVQASAPTPATPVRRRGICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...ACCCCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp GGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GLLCPQPPLQLRSPGLRSICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...GGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp GAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTCCTTGTGCTGGTTTTaGGCAGAGACGTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: EHQVQTNPPGPGGAALSWSLCWF*AETLKG
Trigger: GCCCTTTAACGTCTCTGCCAAAAACCAGCACAAGGA...CCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GCTCAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGTCCTTGTGCTGGTTTTaGGCAGAGACGTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: AQAEPEAVGGLLCPQPPLSLCWF*AETLKG
Trigger: GCCCTTTAACGTCTCTGCCAAAAACCAGCACAAGGA...CAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCAGACAAGGCTCTGCTTaGTCTCCTTGTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: GGLLCPQPPLQLRSPGLRRQGSA*SPCAGF
Trigger: AAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCT...GCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCTTCTTGGAAGGGTCATaGTCACCAAAGTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LPAGWALGRRRVWLGPPSFLEGS*SPKWLV
Trigger: CACCAGCCACTTTGGTGACAATGACCCTTCCAAGAA...GCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAATCCTCCAGGGCCTCTTaGTTGGCTGTTCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PRVGGVSYGCRAPLPGRQSSRAS*LAVPGL
Trigger: GAGGCCTGGAACAGCCAACAAAGAGGCCCTGGAGGA...TTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424011.6
CDS-3UTR CAA 90 bp GCTGGTTGTCTGGGATCACTTGCTGCGGGCAACTGGGAGCAGGTTGCAGAGCCTGCAACTGGGAGCAGGTaGCAGAGCCTGAGGAAACCG +
Preference number: 5 (lower is better)
Translates to: AGCLGSLAAGNWEQVAEPATGSR*QSLRKP
Trigger: CGGTTTCCTCAGGCTCTGCAACCTGCTCCCAGTTGC...AGGCTCTGCAACCTGCTCCCAGTTGCCCGCAGCAAGTGATCCCAGACAACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CAA 90 bp CAGCCGCTTACCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGGAGGGCAGGCCCCTGTaGCAGCACTGCTGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: QPLTFCLVGCGLICRVPLEGRPL*QHCWGD
Trigger: ATCACCCCAGCAGTGCTGCAACAGGGGCCTGCCCTC...CAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGGTAAGCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565666.5
CDS-3UTR CAA 90 bp TGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGGGGGCCGGAGTTTTCTaGCGACTTTCTTGGCCACCC +
Preference number: 5 (lower is better)
Translates to: WFPRVGGVSYGCRAPLPGGAGVF*RLSWPP
Trigger: GGGTGGCCAAGAAAGTCGCAAGAAAACTCCGGCCCC...CCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361909.8
ENST00000424011.6
CDS-3UTR CAA 90 bp CAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAAATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: QAEPEAVGGLLCPQPPLQICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...TTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: VGGLLCPQPPLQLRSPGLICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...GAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTGGCGTTCTCTTCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: VAGVGRSTKCRQTHRGLAFSSSV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGAAGAGAA...CGCCAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCTTCTCTTCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: RSPLCNSEVQASAPTPATFSSSV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGAAGAGAA...GGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp GCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCTTCTCTTCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: AAPSATQKSRPPLQRQRPFSSSV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGAAGAGAA...GGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp GTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGTCCTTGTGCTGGTTTTaGGCAGAGACGTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: VSAAPSATQKSRPPLQRQSLCWF*AETLKG
Trigger: GCCCTTTAACGTCTCTGCCAAAAACCAGCACAAGGA...CTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GCTCAGGCAGAACCTGAGGCTGTAGGGGGCCTGCTGTGTCCGCAGCCCCCTCTGAGACAAGGCTCTGCTTaGTCTCCTTGTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: AQAEPEAVGGLLCPQPPLRQGSA*SPCAGF
Trigger: AAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCT...CAGAGGGGGCTGCGGACACAGCAGGCCCCCTACAGCCTCAGGTTCTGCCTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp AACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCAGGTTCTTGGAAGGGTCATaGTCACCAAAGTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: NSEVQASAPTPATPVRRRFLEGS*SPKWLV
Trigger: CACCAGCCACTTTGGTGACAATGACCCTTCCAAGAA...CCTGCGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTGCCTGCTGGCTGGGCTCTAGGAAGAAGGAGGGTTTGGCTGGGCCCGCCCAGCGGGAACTGGTGCTCCTaGAACCAAAGATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: LPAGWALGRRRVWLGPPSGNWCS*NQRFLE
Trigger: TTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC...GCTGGGCGGGCCCAGCCAAACCCTCCTTCTTCCTAGAGCCCAGCCAGCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GGCCTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCGGGAACTGGTGCTCCTaGAACCAAAGATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: GLLCPQPPLQLRSPGLRSGNWCS*NQRFLE
Trigger: TTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC...GGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LCNSEVQASAPTPATPVRICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LLCPQPPLQLRSPGLRSNICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...GTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp TCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGATTCTCTTCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: SAAPSATQKSRPPLQRQRFSSSV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGAAGAGAA...TCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp AGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTAGACAAGGCTCTGCTTaGTCTCCTTGTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SPLCNSEVQASAPTPATPRQGSA*SPCAGF
Trigger: AAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCT...AGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp AGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACAAGGCAAAGGTCAATTTCTCGGGGCCGGAGTTTTCTaGCGACTTTCTTGGCCACCC +
Preference number: 5 (lower is better)
Translates to: SYGCRAPLPGRQGKGQFLGAGVF*RLSWPP
Trigger: GGGTGGCCAAGAAAGTCGCAAGAAAACTCCGGCCCC...GAGAAATTGACCTTTGCCTTGTCGCCCAGGAAGTGGGGCTCGGCACCCATAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361909.8
ENST00000424011.6
CDS-3UTR CAA 90 bp CTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCAGCAGGAGGCGGCCTTaGAGAGAGCAGAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: LTPRRHGFQGWEVLVMGASRRRP*REQRKA
Trigger: GGCTTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCT...GGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGGGACGGAACACCCCAGCGGCTTaGGAAGCCCCATCCGAGTAC +
Preference number: 5 (lower is better)
Translates to: QSLRKPPGSSNLIFAKGRNTPAA*EAPSEY
Trigger: GTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGTT...CCGTCCCTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CAA 90 bp CTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGCGCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: LQLRSPGLRSNASDPCEAPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...CGCCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: QTNPPGPGGAALSWFLSLICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...CAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACTTCTCTTCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: LLCPQPPLQLRSPGLRSNFSSSV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGAAGAGAA...GTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACGCCAGCGACCCCTGTGAGGAGACAAGGCTCTGCTTaGTCTCCTTGTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: LCNSEVQASAPTPATPVRRQGSA*SPCAGF
Trigger: AAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCT...CCTCACAGGGGTCGCTGGCGTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp TGCAGACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTTCTTGGAAGGGTCATaGTCACCAAAGTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: CRQTHRGLAGQPCHGFCLFLEGS*SPKWLV
Trigger: CACCAGCCACTTTGGTGACAATGACCCTTCCAAGAA...AAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS GCA 90 bp GCGGTGACACAGCGCAGGAAGTCCATCATGGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGCATGGCATCAGCAAAGAGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: AVTQRRKSIMGQHKP*HLSFSCMASAKRKY
Trigger: GTACTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGCGCTGTGTCACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000562357.5
ENST00000562707.5
ENST00000563672.5
ENST00000565003.5
ENST00000565666.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp CTGCTGTGTCCGCAGCCCCCTCTGCAACTCAGAAGTCCAGGCCTCCGCTCCAACCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: LLCPQPPLQLRSPGLRSNPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...GTTGGAGCGGAGGCCTGGACTTCTGAGTTGCAGAGGGGGCTGCGGACACAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp GGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GNWCSLNQRFLEGSLSPKPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...CTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp AGTTGCAAACACGATGGTAGCAAAGAAGCCAAACACCTGTGGACAGGGTGGATGGCCCCATCCGAGTACTaGGCGATGGCCGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: SCKHDGSKEAKHLWTGWMAPSEY*AMAVME
Trigger: CTCCATCACGGCCATCGCCAAGTACTCGGATGGGGC...CATCCACCCTGTCCACAGGTGTTTGGCTTCTTTGCTACCATCGTGTTTGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR CAA 90 bp CAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTCCCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: QTHRGLAGQPCHGFCLCSPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...GGAACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GACAAACCCACCGGGGCCTGGCGGGGCAGCCCTGTCATGGTTTCTGTCTTTGTTTTCTCTTCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: DKPTGAWRGSPVMVSVFVFSSSV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGAAGAGAA...AACAAAGACAGAAACCATGACAGGGCTGCCCCGCCAGGCCCCGGTGGGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp TTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGCGACTTCTCTTCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: FQGWEVLVMGAEPHFLGDFSSSV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGAAGAGAA...GTCGCCCAGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CACCAAAGTGGCTGGTGTGGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCTGTCAGGATCCACATaGGTGTTACCAGTTTGTACT +
Preference number: 5 (lower is better)
Translates to: HQSGWCGQEHQVQTNPPGLSGST*VLPVCT
Trigger: AGTACAAACTGGTAACACCAATGTGGATCCTGACAG...CCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GAAGGAGGGTTTGGCTGGGCCCGCCCAGCTCCCCATGACACTGTCACTGTGATGCTGTCAGGATCCACATaGGTGTTACCAGTTTGTACT +
Preference number: 5 (lower is better)
Translates to: EGGFGWARPAPHDTVTVMLSGST*VLPVCT
Trigger: AGTACAAACTGGTAACACCAATGTGGATCCTGACAG...CATCACAGTGACAGTGTCATGGGGAGCTGGGCGGGCCCAGCCAAACCCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS CCA 90 bp AACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTGGTGTaGGCAGGAGCACCAAGTGCAGACAAACCCACCGGGGCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: NQRFLEGSLSPKWLV*AGAPSADKPTGAFE
Trigger: CTCAAAGGCCCCGGTGGGTTTGTCTGCACTTGGTGCTCCTGCCCACACCAGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565922.1
CDS-3UTR CAA 90 bp AAGTTTCCACTGACGTTTACTAATTGGTCCCTGGGCTGGTTGTCTGGGATCACTGCCCCATCCGAGTACTaGGCGATGGCCGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: KFPLTFTNWSLGWLSGITAPSEY*AMAVME
Trigger: CTCCATCACGGCCATCGCCAAGTACTCGGATGGGGC...AGTGATCCCAGACAACCAGCCCAGGGACCAATTAGTAAACGTCAGTGGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CAA 90 bp GATGCCACTGTTGTACCCTCTGTCTTCTGGACCAGTCAGTCTATGAGCTCTTCTAACACCCCAGCGGCTTaGGAAGCCCCATCCGAGTAC +
Preference number: 5 (lower is better)
Translates to: DATVVPSVFWTSQSMSSSNTPAA*EAPSEY
Trigger: GTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGTT...AGAAGAGCTCATAGACTGACTGGTCCAGAAGACAGAGGGTACAACAGTGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS-3UTR CAA 90 bp AAGAGATTCACACGCAAGAGAATAAGGCTACAAATGCTCCAAACATGGGTCCAGCCTGTGTGGCTCAGGTaGCCAAGGCACCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KRFTRKRIRLQMLQTWVQPVWLR*PRHPPG
Trigger: GCCTGGCGGGTGCCTTGGCAACCTGAGCCACACAGG...CTGGACCCATGTTTGGAGCATTTGTAGCCTTATTCTCTTGCGTGTGAATCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS GCA 90 bp ATGGCCCCAGCACCTGGCTTCTGTCTTGTGGGCTGTGGTCTCATCTaGAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGAT +
Preference number: 5 (lower is better)
Translates to: MAPAPGFCLVGCGLI*RVPLFEEFGHVVKD
Trigger: ATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGCCAGGTGCTGGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS CCA 90 bp GAAATCAGTTGCAAACACGATGGTAGCAAAGAAGCCAAACACCTGTaGACAGGGTGGATGGGATGCATCACAGGGCTGACTCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: EISCKHDGSKEAKHL*TGWMGCITGLTPCS
Trigger: GGAGCAGGGAGTCAGCCCTGTGATGCATCCCATCCACCCTGTCCACAGGTGTTTGGCTTCTTTGCTACCATCGTGTTTGCAACTGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR CAA 90 bp CTCCCTGCTTCAAGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGCCCCATCCGAGTACTaGGCGATGGCCGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: LPASRMKRELVLLEPKILAPSEY*AMAVME
Trigger: CTCCATCACGGCCATCGCCAAGTACTCGGATGGGGC...AAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCTTGAAGCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp ACCCAAGATGCCCTCATACGCAGCGTGGTCAACAGTGCTGAGCTGAGGGGCAAGCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: TQDALIRSVVNSAELRGKPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...CTTGCCCCTCAGCTCAGCACTGTTGACCACGCTGCGTATGAGGGCATCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GACCCAGAATGGTCATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTTCCTTGTGCTGGTTTTaGGCAGAGACGTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: DPEWSSHPQKTWFPRVGGSLCWF*AETLKG
Trigger: GCCCTTTAACGTCTCTGCCAAAAACCAGCACAAGGA...ACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATGACCATTCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCTTCTTGGAAGGGTCATaGTCACCAAAGTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LTPRRHGFQGWEVLVMGAFLEGS*SPKWLV
Trigger: CACCAGCCACTTTGGTGACAATGACCCTTCCAAGAA...GGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp ACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTACTGTGATGCCACTGTaGTACCCTCTGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: TWFPRVGGVSYGCRAPLPTVMPL*YPLSSG
Trigger: TCCAGAAGACAGAGGGTACAACAGTGGCATCACAGT...AGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp ACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGACTGTGATGCCACTGTaGTACCCTCTGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: TPRRHGFQGWEVLVMGAETVMPL*YPLSSG
Trigger: TCCAGAAGACAGAGGGTACAACAGTGGCATCACAGT...CTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCACTGTGATGCCACTGTaGTACCCTCTGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: LTPRRHGFQGWEVLVMGATVMPL*YPLSSG
Trigger: TCCAGAAGACAGAGGGTACAACAGTGGCATCACAGT...GGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp ACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTCCATTTCAGATCTGCTaGGACAAACAGCCCGAGTGT +
Preference number: 5 (lower is better)
Translates to: TWFPRVGGVSYGCRAPLPPFQIC*DKQPEC
Trigger: ACACTCGGGCTGTTTGTCCAAGCAGATCTGAAATGG...AGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR CAA 90 bp AAGTTTCCACTGACGTTTACTAATTGGTCCCTGGGCTGGTTGTCTGGGATCACTTGGTCCCTGGGCTGGTaGTCTGGGATCACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: KFPLTFTNWSLGWLSGITWSLGW*SGITCC
Trigger: GCAGCAAGTGATCCCAGACAACCAGCCCAGGGACCA...AGTGATCCCAGACAACCAGCCCAGGGACCAATTAGTAAACGTCAGTGGAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CAA 90 bp GTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTGCCCCATCCGAGTACTaGGCGATGGCCGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: VPLFEEFGHVVKDQVEISAPSEY*AMAVME
Trigger: CTCCATCACGGCCATCGCCAAGTACTCGGATGGGGC...ACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR CAA 90 bp AGCAGGTTGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SRLQSLRKPPGSSNLIFAICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...GGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CAA 90 bp AATGGGGAGAAGGAGTGGGATACCCAAGATGCCCTCATACGCAGCGTGGTCAACTTCTCTTCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: NGEKEWDTQDALIRSVVNFSSSV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGAAGAGAA...GTTGACCACGCTGCGTATGAGGGCATCTTGGGTATCCCACTCCTTCTCCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp TGGGCTGTGGTCTCATCTGCAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGAGACAAGGCTCTGCTTaGTCTCCTTGTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: WAVVSSAESPCLRNLATSRQGSA*SPCAGF
Trigger: AAAACCAGCACAAGGAGACAAAGCAGAGCCTTGTCT...CGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566756.5
CDS-3UTR CAA 90 bp ACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTGGGAACTGGTGCTCCTaGAACCAAAGATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: TWFPRVGGVSYGCRAPLPGNWCS*NQRFLE
Trigger: TTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC...AGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGGGAACTGGTGCTCCTaGAACCAAAGATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: LTPRRHGFQGWEVLVMGAGNWCS*NQRFLE
Trigger: TTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC...GGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CACCTAGCAGCATGGAACACCTGCTGCCCAGATACAGACAAGGCTCTGCTTTGTACTGTGATGCCACTGTaGTACCCTCTGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: HLAAWNTCCPDTDKALLCTVMPL*YPLSSG
Trigger: TCCAGAAGACAGAGGGTACAACAGTGGCATCACAGT...ACAAAGCAGAGCCTTGTCTGTATCTGGGCAGCAGGTGTTCCATGCTGCTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS GCA 90 bp ATGGTAGCAAAGAAGCCAAACACCATCATGGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGCATGGCATCAGCAAAGAGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: MVAKKPNTIMGQHKP*HLSFSCMASAKRKY
Trigger: GTACTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGTGTTTGGCTTCTTTGCTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564060.5
CDS-3UTR CAA 90 bp CATCTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTTTCTTGGAAGGGTCATaGTCACCAAAGTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HLTPRRHGFQGWEVLVMGFLEGS*SPKWLV
Trigger: CACCAGCCACTTTGGTGACAATGACCCTTCCAAGAA...ACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp ACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCGAGCCCCACTTCCTCTGTCAGGATCCACATaGGTGTTACCAGTTTGTACT +
Preference number: 5 (lower is better)
Translates to: TWFPRVGGVSYGCRAPLPLSGST*VLPVCT
Trigger: AGTACAAACTGGTAACACCAATGTGGATCCTGACAG...AGGAAGTGGGGCTCGGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTCACCCCCAGAAGACATGGTTTCCAAGGGTGGGAGGTGTTAGTTATGGGTGCCCTGTCAGGATCCACATaGGTGTTACCAGTTTGTACT +
Preference number: 5 (lower is better)
Translates to: LTPRRHGFQGWEVLVMGALSGST*VLPVCT
Trigger: AGTACAAACTGGTAACACCAATGTGGATCCTGACAG...GGCACCCATAACTAACACCTCCCACCCTTGGAAACCATGTCTTCTGGGGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp AGGTTGCAGAGCCTGAGGAAACCGCCTGGGAGCTCTAACCTAATATTTGCCAAGCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: RLQSLRKPPGSSNLIFAKPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...CTTGGCAAATATTAGGTTAGAGCTCCCAGGCGGTTTCCTCAGGCTCTGCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CAA 90 bp GAAATCAGTTGCAAACACGATGGTAGCAAAGAAGCCAAACACCTGTGGACAGGGATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: EISCKHDGSKEAKHLWTGICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...CCCTGTCCACAGGTGTTTGGCTTCTTTGCTACCATCGTGTTTGCAACTGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR CAA 90 bp AGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: RGNWCSLNQRFLEGSLSPICRVP*FEEFGH
Trigger: GTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGAT...TGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp TCTAACCTAATATTTGCCAAGGGACGGGATGGGATGAGTGGCATTCATTTTCAGCACCTGGCTTCTGTCTaGTGGGCTGTGGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: SNLIFAKGRDGMSGIHFQHLASV*WAVVSS
Trigger: AGATGAGACCACAGCCCACAAGACAGAAGCCAGGTG...CTGAAAATGAATGCCACTCATCCCATCCCGTCCCTTGGCAAATATTAGGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5
CDS-3UTR CAA 90 bp TGCCACTGTTGTACCCTCTGTCTTCTGGACCAGTCAGTCTATGAGCTCTTCTTTGGGAACTGGTGCTCCTaGAACCAAAGATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: CHCCTLCLLDQSVYELFFGNWCS*NQRFLE
Trigger: TTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC...AAAGAAGAGCTCATAGACTGACTGGTCCAGAAGACAGAGGGTACAACAGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGTCACCAAAGTGGCTCCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: LVLLEPKILGRVIVTKVAPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...AGCCACTTTGGTGACAATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp AGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTACTGTGATGCCACTGTaGTACCCTCTGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RMKRELVLLEPKILGRVITVMPL*YPLSSG
Trigger: TCCAGAAGACAGAGGGTACAACAGTGGCATCACAGT...AATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp GGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTGCAAACACGATGGTAGCAAACCATTTCAGATCTGCTaGGACAAACAGCCCGAGTGT +
Preference number: 5 (lower is better)
Translates to: GHVVKDQVEISCKHDGSKPFQIC*DKQPEC
Trigger: ACACTCGGGCTGTTTGTCCAAGCAGATCTGAAATGG...TTTGCTACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS GCA 90 bp TTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAAGAAGCCAAACACCCCAGCGGCTTT +
Preference number: 5 (lower is better)
Translates to: FEEFGHVVKDQVEIS*KHDGSKEAKHPSGF
Trigger: AAAGCCGCTGGGGTGTTTGGCTTCTTTGCTACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000562707.5
ENST00000564247.1
ENST00000565003.5
ENST00000566121.1
ENST00000567572.6
ENST00000568477.5
CDS-3UTR CAA 90 bp TGCAGAGTCCCCTTGTTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAACCTTGTTTGAGGAATTaGGCCACGTCGTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: CRVPLFEEFGHVVKDQVEPCLRN*ATSLKI
Trigger: GATCTTTAACGACGTGGCCAAATTCCTCAAACAAGG...TTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS-3UTR CAA 90 bp AGAATGAAGAGGGAACTGGTGCTCCTTGAACCAAAGATTCTTGGAAGGGTCATTGGGAACTGGTGCTCCTaGAACCAAAGATTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: RMKRELVLLEPKILGRVIGNWCS*NQRFLE
Trigger: TTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCC...AATGACCCTTCCAAGAATCTTTGGTTCAAGGAGCACCAGTTCCCTCTTCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000565922.1
ENST00000566756.5
ENST00000567572.6
CDS-3UTR CAA 90 bp CAAACATGGGTCCAGAACTCTGGCTCTTTTGTGAGGCCTAGAGTCACAGAAAATCTGTCAGGATCCACATaGGTGTTACCAGTTTGTACT +
Preference number: 5 (lower is better)
Translates to: QTWVQNSGSFVRPRVTENLSGST*VLPVCT
Trigger: AGTACAAACTGGTAACACCAATGTGGATCCTGACAG...ATTTTCTGTGACTCTAGGCCTCACAAAAGAGCCAGAGTTCTGGACCCATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000566756.5
ENST00000567572.6
CDS GCA 90 bp TTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATCAGTTaGAAACACGATGGTAGCAAAGAAGCCAAACACCATCATGGGCCA +
Preference number: 5 (lower is better)
Translates to: FEEFGHVVKDQVEIS*KHDGSKEAKHHHGP
Trigger: TGGCCCATGATGGTGTTTGGCTTCTTTGCTACCATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564060.5
CDS-3UTR CAA 90 bp CGTGTATTTTTGCTAAAACTGAAAGCTGTCAGGATCCACATTGGTGTTACCAGTTTCTTGGAAGGGTCATaGTCACCAAAGTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RVFLLKLKAVRIHIGVTSFLEGS*SPKWLV
Trigger: CACCAGCCACTTTGGTGACAATGACCCTTCCAAGAA...ACTGGTAACACCAATGTGGATCCTGACAGCTTTCAGTTTTAGCAAAAATACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000567572.6
CDS GCA 72 bp GCCCGCACTACCCGCTCGCAGGAAAGCGGACCCCGCTaGGGCCCGGGAGTCCCGGAGGTCCGAGTTGCCCGA +
Preference number: 6 (lower is better)
Translates to: ARTTRSQESGPR*GPGVPEVRVAR
Trigger: TCGGGCAACTCGGACCTCCGGGACTCCCGGGCCGCAGCGGGGTCCGCTTTCCTGCGAGCGGGTAGTGCGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568477.5
CDS TCA 72 bp ATGAGAGACCCGACTCGGCCAGCAGGAGGCGGCCTTTaGGAGAGCAGAGGAAAGCCCGCGCCGGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: MRDPTRPAGGGL*ESRGKPAPAAG
Trigger: CCCTGCTGCCGGCGCGGGCTTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCTGGCCGAGTCGGGTCTCTCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000562357.5
ENST00000562707.5
ENST00000563672.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS GCA 72 bp GCGGAAACCCGGGTCGCTGTCTCCGGTCTAACTTCCTaGCCGTGCGCGTGTCTGGGATCCGGGAACCCAGGC +
Preference number: 6 (lower is better)
Translates to: AETRVAVSGLTS*PCACLGSGNPG
Trigger: GCCTGGGTTCCCGGATCCCAGACACGCGCACGGGCAGGAAGTTAGACCGGAGACAGCGACCCGGGTTTCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562357.5
CDS CCA 72 bp AAACCCGGGCTTCTTCTTCACCCTGGTTCGGGCCGCTaGAGACCTCCCGATCACCGCCCCGGCACCCCTTCG +
Preference number: 6 (lower is better)
Translates to: KPGLLLHPGSGR*RPPDHRPGTPS
Trigger: CGAAGGGGTGCCGGGGCGGTGATCGGGAGGTCTCCAGCGGCCCGAACCAGGGTGAAGAAGAAGCCCGGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361909.8
CDS CCA 72 bp CGGAGGGAAGCGGAAACCCGGGCTTCTTCTTCACCCTaGTTCGGGCCGCTGGAGACCTCCCGATCACCGCCC +
Preference number: 6 (lower is better)
Translates to: RREAETRASSSP*FGPLETSRSPP
Trigger: GGGCGGTGATCGGGAGGTCTCCAGCGGCCCGAACCAGGGTGAAGAAGAAGCCCGGGTTTCCGCTTCCCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361909.8
CDS GCA 72 bp CACCGCCCCGGCACCCCTTCGGAGCTCCCACCCGTCTaGCCCTATCCAGAAGGGCTGTCTATACTCGCTGTC +
Preference number: 6 (lower is better)
Translates to: HRPGTPSELPPV*PYPEGLSILAV
Trigger: GACAGCGAGTATAGACAGCCCTTCTGGATAGGGGCAGACGGGTGGGAGCTCCGAAGGGGTGCCGGGGCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361909.8
ENST00000565666.5
CDS CAA 72 bp AATGAGAGACCCGACTCGGCCAGCAGGAGGCGGCCTTaGAGAGAGCAGAGGAAAGCCCGCGCCGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: NERPDSASRRRP*REQRKARAGSR
Trigger: CCTGCTGCCGGCGCGGGCTTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCTGGCCGAGTCGGGTCTCTCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000562357.5
ENST00000562707.5
ENST00000563672.5
ENST00000564060.5
ENST00000566756.5
ENST00000567572.6
CDS GCA 72 bp TCTCGCGCCCGGAGGGAAGCGGAAACCCGGGCCGTCTaGCCCTATCCAGAAGGGCTGTCTATACTCGCTGTC +
Preference number: 6 (lower is better)
Translates to: SRARREAETRAV*PYPEGLSILAV
Trigger: GACAGCGAGTATAGACAGCCCTTCTGGATAGGGGCAGACGGCCCGGGTTTCCGCTTCCCTCCGGGCGCGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424011.6
CDS GCA 72 bp GGGCTGTCTATACTCGCTGTCTCCGGTCTAACTTCCTaGCCGTGCGCGTGTCTGGGATCCGGGAACCCAGGC +
Preference number: 6 (lower is better)
Translates to: GLSILAVSGLTS*PCACLGSGNPG
Trigger: GCCTGGGTTCCCGGATCCCAGACACGCGCACGGGCAGGAAGTTAGACCGGAGACAGCGAGTATAGACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000565666.5
CDS GCA 72 bp CAGGGCCTCTTTGTTGGCTGTTCCAGGCCTCGGTCCTaGACCCGCCTCCCCCAACCCATTCTCAGAGGACTC +
Preference number: 6 (lower is better)
Translates to: QGLFVGCSRPRS*TRLPQPILRGL
Trigger: GAGTCCTCTGAGAATGGGTTGGGGGAGGCGGGTGCAGGACCGAGGCCTGGAACAGCCAACAAAGAGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424011.6
ENST00000562357.5
CDS CAA 72 bp CTGCTGCCCCAGCCTCACGGCCCATTTCAGATCTGCTaGGACAAACAGCCCGAGTGTCAGGCACAGACCCCC +
Preference number: 6 (lower is better)
Translates to: LLPQPHGPFQIC*DKQPECQAQTP
Trigger: GGGGGTCTGTGCCTGACACTCGGGCTGTTTGTCCAAGCAGATCTGAAATGGGCCGTGAGGCTGGGGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS TCA 72 bp GGAACCCAGGCGTCTAAACAGCAAAGACCCCGGCCGTaGTGTCGGCTCCGCAACCCATGCCCTCTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: GTQASKQQRPRP*CRLRNPCPLFF
Trigger: GAAAAAGAGAGGGCATGGGTTGCGGAGCCGACATCACGGCCGGGGTCTTTGCTGTTTAGACGCCTGGGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000562357.5
CDS GCA 72 bp GCCTCCCCCAACCCATTCTCAGAGGACTCTCAGACCTaGAAGCGCAGCTCCAGGCACACACACAGACACACA +
Preference number: 6 (lower is better)
Translates to: ASPNPFSEDSQT*KRSSRHTHRHT
Trigger: TGTGTGTCTGTGTGTGTGCCTGGAGCTGCGCTTGCAGGTCTGAGAGTCCTCTGAGAATGGGTTGGGGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424011.6
ENST00000562357.5
CDS TCA 72 bp AGTACAAGGCCAGCAGGAACTCCAGCAGAGGCGCTGTaGGGAAGGCAGATGCTGAGGACGCCACATAGCAGA +
Preference number: 6 (lower is better)
Translates to: STRPAGTPAEAL*GRQMLRTPHSR
Trigger: TCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTCACAGCGCCTCTGCTGGAGTTCCTGCTGGCCTTGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000562357.5
ENST00000562707.5
ENST00000563672.5
ENST00000564060.5
ENST00000565003.5
ENST00000565666.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS GCA 72 bp CAGCGCAGGAAGTCCATCATGGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGCATGGCATCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: QRRKSIMGQHKP*HLSFSCMASAK
Trigger: CTTTGCTGATGCCATGCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000562357.5
ENST00000562707.5
ENST00000563672.5
ENST00000565003.5
ENST00000565666.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS CCA 72 bp GATGGTAGCAAAGAAGCCAAACACCTGTGGACAGGGTaGATGGGATGCATCACAGGGCTGACTCCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: DGSKEAKHLWTG*MGCITGLTPCS
Trigger: GGAGCAGGGAGTCAGCCCTGTGATGCATCCCATCCACCCTGTCCACAGGTGTTTGGCTTCTTTGCTACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565666.5
ENST00000566756.5
CDS CAA 90 bp ACACAGCGCAGGAAGTCCATCATGGGCCAGCACAAGCCCTGCCACTaGTCATTCAGCTGCATGGCATCAGCAAAGAGGAAGTACAAGGCC +
Preference number: 6 (lower is better)
Translates to: TQRRKSIMGQHKPCH*SFSCMASAKRKYKA
Trigger: GGCCTTGTACTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGACTTCCTGCGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000562357.5
ENST00000562707.5
ENST00000563672.5
ENST00000565003.5
ENST00000565666.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS CAA 72 bp AGGAAGTCCATCATGGGCCAGCACAAGCCCTGCCACTaGTCATTCAGCTGCATGGCATCAGCAAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: RKSIMGQHKPCH*SFSCMASAKRK
Trigger: CTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000361909.8
ENST00000424011.6
ENST00000460097.5
ENST00000562357.5
ENST00000562707.5
ENST00000563672.5
ENST00000565003.5
ENST00000565666.5
ENST00000566121.1
ENST00000566756.5
ENST00000567572.6
ENST00000568477.5
CDS CAA 72 bp CCAAACACCATCATGGGCCAGCACAAGCCCTGCCACTaGTCATTCAGCTGCATGGCATCAGCAAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: PNTIMGQHKPCH*SFSCMASAKRK
Trigger: CTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGTGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564060.5
CDS CAA 90 bp GCAAAGAAGCCAAACACCATCATGGGCCAGCACAAGCCCTGCCACTaGTCATTCAGCTGCATGGCATCAGCAAAGAGGAAGTACAAGGCC +
Preference number: 6 (lower is better)
Translates to: AKKPNTIMGQHKPCH*SFSCMASAKRKYKA
Trigger: GGCCTTGTACTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGTGTTTGGCTTCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564060.5
CDS GCA 72 bp AAGAAGCCAAACACCATCATGGGCCAGCACAAGCCCTaGCACTTGTCATTCAGCTGCATGGCATCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: KKPNTIMGQHKP*HLSFSCMASAK
Trigger: CTTTGCTGATGCCATGCAGCTGAATGACAAGTGGCAGGGCTTGTGCTGGCCCATGATGGTGTTTGGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564060.5
CDS CAA 90 bp CCTGGCTTCTGTCTTGTGGGCTGTGGTCTCATCTGCAGAGTCCCCTaGTTTGAGGAATTTGGCCACGTCGTTAAAGATCAGGTAGAAATC +
Preference number: 6 (lower is better)
Translates to: PGFCLVGCGLICRVP*FEEFGHVVKDQVEI
Trigger: GATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTGCAGATGAGACCACAGCCCACAAGACAGAAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565003.5