RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CMSS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184220

Ensembl transcript IDs: ENST00000421999.8, ENST00000463526.1, ENST00000479555.1, ENST00000489081.5, ENST00000491299.5, ENST00000496116.1, ENST00000497345.1

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATaGGTGTGCAGAAGGCAAGAGCTGAGGTTTGGGAGCCTCTGCCTC +
Preference number: 1 (lower is better)
Translates to: VQAPSLGSFHVLLGL*VCRRQELRFGSLCL
Trigger: GAGGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 90 bp GCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGGTGTaGAGAAGGCAAGAGCTGAGGTTTGGGAGCCTCTGCCTCAATTTC +
Preference number: 1 (lower is better)
Translates to: APSLGSFHVLLGLWV*RRQELRFGSLCLNF
Trigger: GAAATTGAGGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 90 bp GGCTTATGGGTGTGCAGAAGGCAAGAGCTGAGGTTTGGGAGCCTCTaGCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: GLWVCRRQELRFGSL*LNFRGCMETPGCPG
Trigger: GCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCATAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 90 bp GGGCTCAGAGAGGCAAGACCTTACGCTTGCCTAAGGTCACCCAGCTaGTCTTTCCTTTCTCCTGCACAGTTACATCAGAAGCCAGTTGGT +
Preference number: 1 (lower is better)
Translates to: GLREARPYACLRSPS*SFLSPAQLHQKPVG
Trigger: ACCAACTGGCTTCTGATGTAACTGTGCAGGAGAAAGGAAAGAGCAGCTGGGTGACCTTAGGCAAGCGTAAGGTCTTGCCTCTCTGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR TCA 90 bp GCTTCCACGTGCTGTTGGGCTTATGGGTGTGCAGAAGGCAAGAGCTaGGGTTTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAA +
Preference number: 1 (lower is better)
Translates to: ASTCCWAYGCAEGKS*GLGASASISEDVWK
Trigger: TTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCATAAGCCCAACAGCACGTGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 90 bp CCTGCCACCCTTTTTGCTGGGACCATGCCTCAGAGTTTACAAATCTaGTCCCCATGTACTATCTCCTGGAATCCTCAACAATGCTGTGAG +
Preference number: 1 (lower is better)
Translates to: PATLFAGTMPQSLQI*SPCTISWNPQQCCE
Trigger: CTCACAGCATTGTTGAGGATTCCAGGAGATAGTACATGGGGAGCAGATTTGTAAACTCTGAGGCATGGTCCCAGCAAAAAGGGTGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 90 bp TGCTCTCTTGTTGCCACAAGATGTGGTTGCATCCCTTTCATCTTCTaGCATGATTGTAAATTTCCTGAGGCCTCCCCAGCCATCCTCCTG +
Preference number: 1 (lower is better)
Translates to: CSLVATRCGCIPFIF*HDCKFPEASPAILL
Trigger: CAGGAGGATGGCTGGGGAGGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTGTGGCAACAAGAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR TCA 90 bp CTGCTCTTTCCTTTCTCCTGCACAGTTACATCAGAAGCCAGTTGGTaGCAGAAAAACACGGTCCGCTCAACAAGGATCATACACAAGCCG +
Preference number: 1 (lower is better)
Translates to: LLFPFSCTVTSEASW*QKNTVRSTRIIHKP
Trigger: CGGCTTGTGTATGATCCTTGTTGAGCGGACCGTGTTTTTCTGTCACCAACTGGCTTCTGATGTAACTGTGCAGGAGAAAGGAAAGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 90 bp AACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTCTCCCACTTaGAATGGGAGCATTTACCCAATGCCTGTACCTCCATTGTATCTT +
Preference number: 1 (lower is better)
Translates to: NWHEAFSSFGPVSPT*NGSIYPMPVPPLYL
Trigger: AAGATACAATGGAGGTACAGGCATTGGGTAAATGCTCCCATTCCAAGTGGGAGAAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 90 bp CAGGAACTGGAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTaGTGGCATTGTGCCCCTGCTTTAGGGATCTGTGTAACTTTGAAC +
Preference number: 1 (lower is better)
Translates to: QELEQRSLLLCFSRD*WHCAPALGICVTLN
Trigger: GTTCAAAGTTACACAGATCCCTAAAGCAGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTCCAGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 90 bp CTTCCCCCTTCACTCTCTTGCTCTCTTGTTGCCACAAGATGTGGTTaGATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCC +
Preference number: 1 (lower is better)
Translates to: LPPSLSCSLVATRCG*IPFIFCHDCKFPEA
Trigger: GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTGTGGCAACAAGAGAGCAAGAGAGTGAAGGGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 90 bp CTTGGGAGCCCACTCCTTGCATCAGAGTGGCCTGGATGTGAGACATaGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCC +
Preference number: 1 (lower is better)
Translates to: LGSPLLASEWPGCET*SQRLFWSFKIQRVP
Trigger: GGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCACATCCAGGCCACTCTGATGCAAGGAGTGGGCTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 90 bp GAACTGGAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTGGTaGCATTGTGCCCCTGCTTTAGGGATCTGTGTAACTTTGAACTTG +
Preference number: 1 (lower is better)
Translates to: ELEQRSLLLCFSRDW*HCAPALGICVTLNL
Trigger: CAAGTTCAAAGTTACACAGATCCCTAAAGCAGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 90 bp TGTGAGAATGGATTAATATACCTGCCACCCTTTTTGCTGGGACCATaGCTCAGAGTTTACAAATCTGCTCCCCATGTACTATCTCCTGGA +
Preference number: 1 (lower is better)
Translates to: CENGLIYLPPFLLGP*LRVYKSAPHVLSPG
Trigger: TCCAGGAGATAGTACATGGGGAGCAGATTTGTAAACTCTGAGGCATGGTCCCAGCAAAAAGGGTGGCAGGTATATTAATCCATTCTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 90 bp GCATCAGAGTGGCCTGGATGTGAGACATGGAGTCAAAGATTATTTTaGAGCTTTAAGATTCAAAGAGTGCCCTGCTGGGTTTCAAACTGG +
Preference number: 1 (lower is better)
Translates to: ASEWPGCETWSQRLF*SFKIQRVPCWVSNW
Trigger: CCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCACATCCAGGCCACTCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 90 bp AGTCTGGCAGGTTCAGTTCTTCTAATTCAATCACCAAGCGTCTGCTaGTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGGTAACC +
Preference number: 1 (lower is better)
Translates to: SLAGSVLLIQSPSVC*YNSPSSASVGLQVT
Trigger: GGTTACCTGAAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGCCAGACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR GCA 90 bp AGGAGTCTGGCAGGTTCAGTTCTTCTAATTCAATCACCAAGCGTCTaGTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGGTA +
Preference number: 1 (lower is better)
Translates to: RSLAGSVLLIQSPSV*CYNSPSSASVGLQV
Trigger: TACCTGAAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGCCAGACTCCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR CCA 90 bp AGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTGCTaGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTT +
Preference number: 1 (lower is better)
Translates to: SQRLFWSFKIQRVPC*VSNWHEAFSSFGPV
Trigger: AACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 90 bp ACCAAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTaGTCTCAAATGGAGATGAGGAACTTATCAGGAACTGGAGCAAAG +
Preference number: 1 (lower is better)
Translates to: TKMLIVIWTMKSRLR*SQMEMRNLSGTGAK
Trigger: CTTTGCTCCAGTTCCTGATAAGTTCCTCATCTCCATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 90 bp GCCGAGCTGCAGATGATCAGCATCAGGACCGATTTCTTCTCACTGTaGTTCTTCCTAAGTTTTACCCACTTAGGACAAATTTCTTTTAGG +
Preference number: 1 (lower is better)
Translates to: AELQMISIRTDFFSL*FFLSFTHLGQISFR
Trigger: CCTAAAAGAAATTTGTCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGATGCTGATCATCTGCAGCTCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR TCA 90 bp TTTACCCACTTAGGACAAATTTCTTTTAGGTATGAGGAAAGACTGTaGGTCAAATCATTGGCCTTGAGGAAACAGGAGTCTGGCAGGTTC +
Preference number: 1 (lower is better)
Translates to: FTHLGQISFRYEERL*VKSLALRKQESGRF
Trigger: GAACCTGCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGACTCACAGTCTTTCCTCATACCTAAAAGAAATTTGTCCTAAGTGGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR TCA 90 bp GAAGACAGGAATATGAGGGATGTTTGGAACCTCCTAGAGACTTGTTaGACAGTTTTGACCAAAATGCTGATAGTGATATGGACAATGAAG +
Preference number: 1 (lower is better)
Translates to: EDRNMRDVWNLLETC*TVLTKMLIVIWTMK
Trigger: CTTCATTGTCCATATCACTATCAGCATTTTGGTCAAAACTGTTCAACAAGTCTCTAGGAGGTTCCAAACATCCCTCATATTCCTGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR TCA 90 bp TTATATTGTTGTCTTTTTATACGTTTACAAAGGGCCAAATTCACTTaGTGCTCTTTCTACCACTACCCTGCTGATGTGGTTTGGCTGTGT +
Preference number: 1 (lower is better)
Translates to: LYCCLFIRLQRAKFT*CSFYHYPADVVWLC
Trigger: ACACAGCCAAACCACATCAGCAGGGTAGTGGTAGAAAGAGCATCAAGTGAATTTGGCCCTTTGTAAACGTATAAAAAGACAACAATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 90 bp TTATACAGTACCAGTGATGACTTCTTAGTTTTGATAACTCTATTATaGTTATACAAGAATTTAACACAGGGAAAGCTCAGGGAAGGGGAT +
Preference number: 1 (lower is better)
Translates to: LYSTSDDFLVLITLL*LYKNLTQGKLREGD
Trigger: ATCCCCTTCCCTGAGCTTTCCCTGTGTTAAATTCTTGTATAACCATAATAGAGTTATCAAAACTAAGAAGTCATCACTGGTACTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 90 bp GGGACTGTACCCTGCAGAGCCACAGGGGCAGAGCTGCCTAAGGCCTaGGGAGCCCACTCCTTGCATCAGAGTGGCCTGGATGTGAGACAT +
Preference number: 2 (lower is better)
Translates to: GTVPCRATGAELPKA*GAHSLHQSGLDVRH
Trigger: ATGTCTCACATCCAGGCCACTCTGATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTCTGCCCCTGTGGCTCTGCAGGGTACAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 90 bp CTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTaGGGCTTATGGGTGTGCAGAAGGCAAGAGCTGAGGTTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: LQRVQAPSLGSFHVL*GLWVCRRQELRFGS
Trigger: GCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp CAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGAGGCCGGGGTGGAATTaGCATGGTTTGGCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: QRVQAPSLGSFHVLLGLWRPGWN*HGLALC
Trigger: ACACAGAGCCAAACCATGTCAATTCCACCCCGGCCT...CCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGTTCTGCCAAGTTTCCTaGGGCCTCTCAGCCATGCCT +
Preference number: 2 (lower is better)
Translates to: QHQPVKATMGTVPCRATGFCQVS*GLSAMP
Trigger: AGGCATGGCTGAGAGGCCTCAGGAAACTTGGCAGAA...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp TGGGCCCAGCTGCTCTGTGCAGCCTTAGGACATGGCAGCCTAATTCCCAGCTGCGGAATTGACATGGTTTaGCTCTGTGTCTCCACCCGA +
Preference number: 2 (lower is better)
Translates to: WAQLLCAALGHGSLIPSCGIDMV*LCVSTR
Trigger: TCGGGTGGAGACACAGAGCCAAACCATGTCAATTCC...GCAGCTGGGAATTAGGCTGCCATGTCCTAAGGCTGCACAGAGCAGCTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 90 bp AGAGCCACAGGGGCAGAGCTGCCTAAGGCCTTGGGAGCCCACTCCTaGCATCAGAGTGGCCTGGATGTGAGACATGGAGTCAAAGATTAT +
Preference number: 2 (lower is better)
Translates to: RATGAELPKALGAHS*HQSGLDVRHGVKDY
Trigger: ATAATCTTTGACTCCATGTCTCACATCCAGGCCACTCTGATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTCTGCCCCTGTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR GCA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCATGGGGACTGTACCCTaGAGAGCCACAGGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSMGTVP*RATGAE
Trigger: CTCTGCCCCTGTGGCTCTGCAGGGTACAGTCCCCAT...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGCAAAGAGTGCCCTGCTaGGTTTCAAACTGGCATGAG +
Preference number: 2 (lower is better)
Translates to: QHQPVKATMGTVPCRATGQRVPC*VSNWHE
Trigger: CTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTG...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp GCAGAGCTGCCTAAGGCCTTGGGAGCCCACTCCTTGCATCAGAGTGGCCTGGATCAGTTAATGCTGGAATaGGTTAAGACTTTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: AELPKALGAHSLHQSGLDQLMLE*VKTLGD
Trigger: GTCCCCCAAAGTCTTAACTCATTCCAGCATTAACTG...ATCCAGGCCACTCTGATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCGTTGGGGGAGGGACCTaGTGGAAGGTGACTGGATCA +
Preference number: 2 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSVGGGT*WKVTGS
Trigger: TGATCCAGTCACCTTCCACCAGGTCCCTCCCCCAAC...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp GCTGTCATCGACCTAATGAGCTCCAGGGCTCGGACGGCCGAGCTGCAGATGATCTATGAGGAAAGACTGTaGGTCAAATCATTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: AVIDLMSSRARTAELQMIYEERL*VKSLAL
Trigger: CAAGGCCAATGATTTGACTCACAGTCTTTCCTCATA...GATCATCTGCAGCTCGGCCGTCCGAGCCCTGGAGCTCATTAGGTCGATGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR-3UTR CCA 90 bp CTGTGTCCCCACCCAAGTTTCATGTCGAATTGTAATTCCCAGTGTTGGGGGAGGTGCTTTAGCAGAGACTaGTGGCATTGTGCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LCPHPSFMSNCNSQCWGRCFSRD*WHCAPA
Trigger: AGCAGGGGCACAATGCCACCAGTCTCTGCTAAAGCA...CCTCCCCCAACACTGGGAATTACAATTCGACATGAAACTTGGGTGGGGACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR GCA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGTTAAGATTCAAAGAGTaGCCTGCTGGGTTTCAAACT +
Preference number: 2 (lower is better)
Translates to: QHQPVKATMGTVPCRATGLRFKE*PAGFQT
Trigger: AGTTTGAAACCCAGCAGGGCACTCTTTGAATCTTAA...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp GAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTGGTGGCATTGTGCCCCTTGCCACCCTTTTTGCTaGGACCATGCCTCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: EQRSLLLCFSRDWWHCAPCHPFC*DHASEF
Trigger: AAACTCTGAGGCATGGTCCCAGCAAAAAGGGTGGCA...AGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp TGGGTGTGCAGAAGGCAAGAGCTGAGGTTTGGGAGCCTCTGCCTCAATTTCAGATTCTCCCACTTGGAATaGGAGCATTTACCCAATGCC +
Preference number: 2 (lower is better)
Translates to: WVCRRQELRFGSLCLNFRFSHLE*EHLPNA
Trigger: GGCATTGGGTAAATGCTCCCATTCCAAGTGGGAGAA...TCTGAAATTGAGGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGCTTCAGAGACCTTCGTaGCAGCCCTCCCCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMLQRPS*QPSPAP
Trigger: TGGGGCTGGGGAGGGCTGCCACGAAGGTCTCTGAAG...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR GCA 90 bp TGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTCTCTTTCCTTTCTCCTaGACAGTTACATCAGAAGCC +
Preference number: 2 (lower is better)
Translates to: CPAGFQTGMRPLAPLGQFLFPFS*TVTSEA
Trigger: GGCTTCTGATGTAACTGTGCAGGAGAAAGGAAAGAG...AAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR GCA 90 bp ATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGCGCCATGTGAAGATGTaGTTGCTTCCCCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: ISEDVWKRLDVQAEVCYRRHVKM*LLPLHL
Trigger: AAGGTGAAGGGGAAGCAAGCACATCTTCACATGGCG...CCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp TGGGTGTGCAGAAGGCAAGAGCTGAGGTTTGGGAGCCTCTGCCTCAATTTCAGATTTGAGTTGATAAGATaGGGCTCAGAGAGGCAAGAC +
Preference number: 2 (lower is better)
Translates to: WVCRRQELRFGSLCLNFRFELIR*GSERQD
Trigger: GTCTTGCCTCTCTGAGCCCCATCTTATCAACTCAAA...TCTGAAATTGAGGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp ATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGGGTGGAATTGACATaGTTTGGCTCTGTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: ISEDVWKRLDVQAEVCYRGVELT*FGSVSP
Trigger: TGGAGACACAGAGCCAAACCATGTCAATTCCACCCC...CCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp GAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTGGTGGCATTGTGCCCCTAATGTGAGAAGAACATaGAATTTGGAAGAGGCCGGG +
Preference number: 2 (lower is better)
Translates to: EQRSLLLCFSRDWWHCAPNVRRT*NLEEAG
Trigger: CCCGGCCTCTTCCAAATTTCATGTTCTTCTCACATT...AGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR GCA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCATTCAAAGAGTGCCCTaGTGGGTTTCAAACTGGCAT +
Preference number: 2 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSIQRVP*WVSNWH
Trigger: ATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAAT...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR GCA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAAAGCCTAATTCCCAGCTaGCCCAGCTCCAGCTGTGAC +
Preference number: 2 (lower is better)
Translates to: FELGRDDLGYPAEISKQQSLIPS*PSSSCD
Trigger: GTCACAGCTGGAGCTGGGGCAGCTGGGAATTAGGCT...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp TTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGTTACAGGCTCATAGGTaGAAGGAAGTTGCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: LGASASISEDVWKRLDVQLQAHR*KEVALS
Trigger: AGACAAGGCAACTTCCTTCCACCTATGAGCCTGTAA...CTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp ATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGACTTTGGGGGACTGTTaGGAAGGCATGATTGTGTTT +
Preference number: 2 (lower is better)
Translates to: ISEDVWKRLDVQAEVCYRTLGDC*EGMIVF
Trigger: AAACACAATCATGCCTTCTCAACAGTCCCCCAAAGT...CCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp GCTGTTTGGTTTTCTCTGAAGGTACAGGAACTGGAACTGTCTCCTGCTGCATCATTCTCCTTCACCATCTaGTGCTTCTCAATCCCTACC +
Preference number: 2 (lower is better)
Translates to: AVWFSLKVQELELSPAASFSFTI*CFSIPT
Trigger: GGTAGGGATTGAGAAGCATCAGATGGTGAAGGAGAA...TGATGCAGCAGGAGACAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR-3UTR GCA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAAACCTGCCACCCTTTTTaGTGGGACCATGCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: FELGRDDLGYPAEISKQQTCHPF*WDHASE
Trigger: CTCTGAGGCATGGTCCCAGCAAAAAGGGTGGCAGGT...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGATCAGACTTTGGAGTTaGACTTTTCAGTTAATGCTG +
Preference number: 2 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVIRLWS*TFQLML
Trigger: CAGCATTAACTGAAAAGTCCAACTCCAAAGTCTGAT...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCCTCCTTGCATCAGAGTaGCCTGGATGTGAGACATGG +
Preference number: 2 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEALLASE*PGCETW
Trigger: CCATGTCTCACATCCAGGCCACTCTGATGCAAGGAG...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp CAAGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGTGCCTAGTGGAGCTGTaGGAAGAGAGCCATCATCCT +
Preference number: 2 (lower is better)
Translates to: QDVVASLSSSAMIVNFLRCLVEL*EESHHP
Trigger: AGGATGATGGCTCTCTTCTCACAGCTCCACTAGGCA...CCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR GCA 90 bp AAGATTCAAAGAGTGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCCAGAGTTTACAAATCTaGTCCCCATGTACTATCTCC +
Preference number: 2 (lower is better)
Translates to: KIQRVPCWVSNWHEAFSSQSLQI*SPCTIS
Trigger: GGAGATAGTACATGGGGAGCAGATTTGTAAACTCTG...GGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGTGCAGCCTTAGGACATaGCAGCCTAATTCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMCSLRT*QPNSQL
Trigger: CAGCTGGGAATTAGGCTGCCATGTCCTAAGGCTGCA...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp CTGTGTCCCCACCCAAGTTTCATGTCGAATTGTAATTCCCAGTGTTGGGGGAGGAGAAAAGCCATTTTCTaGGGAGAAATTCAAGCTCAC +
Preference number: 2 (lower is better)
Translates to: LCPHPSFMSNCNSQCWGRRKAIF*GEIQAH
Trigger: GTGAGCTTGAATTTCTCCCCAGAAAATGGCTTTTCT...CCTCCCCCAACACTGGGAATTACAATTCGACATGAAACTTGGGTGGGGACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCAAGAAGACAGGAATATaGGGGATGTTTGGAACCTCC +
Preference number: 2 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEAKKTGI*GMFGTS
Trigger: GGAGGTTCCAAACATCCCTCATATTCCTGTCTTCTT...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR TCA 90 bp ATCAGGACCGATTTCTTCTCACTGTGGTTCTTCCTAAGTTTTACCCACTTAGGATCAAATCATTGGCCTTaGGGAAACAGGAGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: IRTDFFSLWFFLSFTHLGSNHWP*GNRSLA
Trigger: TGCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGA...TCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR-3UTR GCA 90 bp ATCAGGACCGATTTCTTCTCACTGTGGTTCTTCCTAAGTTTTACCCACTTAGGAACTGGAACTGTCTCCTaGTGCATCACTTCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: IRTDFFSLWFFLSFTHLGTGTVS*CITSVS
Trigger: AGACACAGAAGTGATGCAGCAGGAGACAGTTCCAGT...TCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR-3UTR TCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACTGACTTGCACAGACTaGGCACTCCCATTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTLTCTD*ALPFPE
Trigger: TTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497345.1
3UTR-3UTR GCA 90 bp GCTCTGTGTCTCCACCCGAATCTTATGTTGAATTATAATTCCCAATGTTGGGGGTGGAATCCTCAACAATaGTGTGAGACATTCCCACTT +
Preference number: 2 (lower is better)
Translates to: ALCLHPNLMLNYNSQCWGWNPQQ*CETFPL
Trigger: AAGTGGGAATGTCTCACAGCATTGTTGAGGATTCCA...CCCCCAACATTGGGAATTATAATTCAACATAAGATTCGGGTGGAGACACAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGGAAGAACATGAAATTTaGAAGAGGCCGGGGTGGAAT +
Preference number: 2 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMEEHEI*KRPGWN
Trigger: ATTCCACCCCGGCCTCTTCCAAATTTCATGTTCTTC...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR GCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCTTTTTGCTGGGACCATaGCTCAGAGTTTACAAATCT +
Preference number: 2 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEAFLLGP*LRVYKS
Trigger: AGATTTGTAAACTCTGAGGCATGGTCCCAGCAAAAA...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp GTGAGACATGGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTTATAATTCCCAATGTTaGGGGAGGGACCTGGTGGAA +
Preference number: 2 (lower is better)
Translates to: VRHGVKDYFGALRFKECPYNSQC*GRDLVE
Trigger: TTCCACCAGGTCCCTCCCCCAACATTGGGAATTATA...AGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp CAAGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGAATGAGTTAAGACTTTaGGGGACTGTTGAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: QDVVASLSSSAMIVNFLRNELRL*GTVEKA
Trigger: TGCCTTCTCAACAGTCCCCCAAAGTCTTAACTCATT...CCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp TCACCAAGCGTCTGCTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGTCTTTCTTCTTTTCCTaGTCTTGGTGGTATTCTCTT +
Preference number: 2 (lower is better)
Translates to: SPSVCCYNSPSSASVGLQSFFFS*SWWYSL
Trigger: AAGAGAATACCACCAAGACCAGGAAAAGAAGAAAGA...CTGAAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR-3UTR TCA 90 bp AATAATTTTATAACTTTGCCGTCTCCTCTGAATGCTGTCATCGACCTAATGAGCCTGTTTGGTTTTCTCTaGAGGTACAGGAACTGGAAC +
Preference number: 2 (lower is better)
Translates to: NNFITLPSPLNAVIDLMSLFGFL*RYRNWN
Trigger: GTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAG...GCTCATTAGGTCGATGACAGCATTCAGAGGAGACGGCAAAGTTATAAAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR CAA 90 bp AGAAGACAGGAATATGAGGGATGTTTGGAACCTCCTAGAGACTTGTaGAACAGTTTTGACCAAAATGCTGATAGTGATATGGACAATGAA +
Preference number: 2 (lower is better)
Translates to: RRQEYEGCLEPPRDL*NSFDQNADSDMDNE
Trigger: TTCATTGTCCATATCACTATCAGCATTTTGGTCAAAACTGTTCAACAAGTCTCTAGGAGGTTCCAAACATCCCTCATATTCCTGTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 90 bp AGAAGAAGACAGGAATATGAGGGATGTTTGGAACCTCCTAGAGACTaGTTGAACAGTTTTGACCAAAATGCTGATAGTGATATGGACAAT +
Preference number: 2 (lower is better)
Translates to: RRRQEYEGCLEPPRD*LNSFDQNADSDMDN
Trigger: ATTGTCCATATCACTATCAGCATTTTGGTCAAAACTGTTCAACAAGTCTCTAGGAGGTTCCAAACATCCCTCATATTCCTGTCTTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CCA 90 bp ATCAGCTTCTGTAGGTCTTCAGGTAACCCTGGTTTTGGTTCTGATTTTGCAAGATTCTTTTCCTGGTCTTaGTGGTATTCTCTTTTCTTT +
Preference number: 2 (lower is better)
Translates to: ISFCRSSGNPGFGSDFARFFSWS*WYSLFF
Trigger: AAAGAAAAGAGAATACCACCAAGACCAGGAAAAGAA...TCTTGCAAAATCAGAACCAAAACCAGGGTTACCTGAAGACCTACAGAAGCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR GCA 72 bp CACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTaGAGAGCCACAGGGGCAGAGCTGCCTAAGGCCTTG +
Preference number: 3 (lower is better)
Translates to: HQPVKATMGTVP*RATGAELPKAL
Trigger: CAAGGCCTTAGGCAGCTCTGCCCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR TCA 72 bp ACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTaGAGCCCTCATGGAGAGCCTCTACTAGGGCAGTGC +
Preference number: 3 (lower is better)
Translates to: TPGCPGRSLLQG*SPHGEPLLGQC
Trigger: GCACTGCCCTAGTAGAGGCTCTCCATGAGGGCTTCACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp AGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTaGTGTTGGGCTTATGGGTGTGCAGAAGGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: RGCKPQALAAST*CWAYGCAEGKS
Trigger: GCTCTTGCCTTCTGCACACCCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp GGGGCCAAGGTACAGCTGAACCATTGCTTCAGAGGGTaGAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGT +
Preference number: 3 (lower is better)
Translates to: GAKVQLNHCFRG*KPQALAASTCC
Trigger: ACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTGAAGCAATGGTTCAGCTGTACCTTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp CTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGGTGTaGAGAAGGCAAGAGCTGAGGTTTGGGAGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: LGSFHVLLGLWV*RRQELRFGSLC
Trigger: GCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCATAAGCCCAACAGCACGTGGAAGCTGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp CCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATaGGTGTGCAGAAGGCAAGAGCTGAGGTTTGGGAGC +
Preference number: 3 (lower is better)
Translates to: PSLGSFHVLLGL*VCRRQELRFGS
Trigger: GCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGAGGCCTTTAGCTCCTTaGGGCCAGTTTCTCCCACTT +
Preference number: 3 (lower is better)
Translates to: QHQPVKATMGTVPCRATGRPLAP*GQFLPL
Trigger: AAGTGGGAGAAACTGGCCCAAAGGAGCTAAAGGCCT...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCGAGCTGCCTAAGGCCTaGGGAGCCCACTCCTTGCAT +
Preference number: 3 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSELPKA*GAHSLH
Trigger: ATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTC...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGTACATCAGAAGCCAGTaGGTGACAGAAAAACACGGT +
Preference number: 3 (lower is better)
Translates to: QHQPVKATMGTVPCRATGYIRSQ*VTEKHG
Trigger: ACCGTGTTTTTCTGTCACCAACTGGCTTCTGATGTA...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp TTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGTACCTGCCACCCTTTTaGCTGGGACCATGCCTCAGA +
Preference number: 3 (lower is better)
Translates to: LGASASISEDVWKRLDVQYLPPF*LGPCLR
Trigger: TCTGAGGCATGGTCCCAGCAAAAAGGGTGGCAGGTA...CTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp GATAAGATGGGGCTCAGAGAGGCAAGACCTTACGCTTaGCTAAGGTCACCCAGCTGCTCTTTCCTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: DKMGLREARPYA*LRSPSCSFLSP
Trigger: AGGAGAAAGGAAAGAGCAGCTGGGTGACCTTAGGCAAGCGTAAGGTCTTGCCTCTCTGAGCCCCATCTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp GTGTGCAGAAGGCAAGAGCTGAGGTTTGGGAGCCTCTaGCTCAATTTCAGAGGATGTATGGAAACGCCTGGA +
Preference number: 3 (lower is better)
Translates to: VCRRQELRFGSL*LNFRGCMETPG
Trigger: TCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp CCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTaGATGTCCAGGCAGAAGTCTGCTACAGGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: PLPQFQRMYGNA*MSRQKSATGVK
Trigger: CTTCACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp GGTTTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATaGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTAC +
Preference number: 3 (lower is better)
Translates to: GLGASASISEDV*KRLDVQAEVCY
Trigger: GTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGTGGAAGGAAGTTGCCTaGTCTCAGATCAGACTTTGG +
Preference number: 3 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVWKEVA*SQIRLW
Trigger: CCAAAGTCTGATCTGAGACAAGGCAACTTCCTTCCA...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGATAGGTGGAAGGAAGTaGCCTTGTCTCAGATCAGAC +
Preference number: 3 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVIGGRK*PCLRSD
Trigger: GTCTGATCTGAGACAAGGCAACTTCCTTCCACCTAT...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp TGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTGGACAGATTTTCCCCTaGCTGTTCTGCTGTTCTCAT +
Preference number: 3 (lower is better)
Translates to: CPAGFQTGMRPLAPLGQFGQIFP*LFCCSH
Trigger: ATGAGAACAGCAGAACAGCAAGGGGAAAATCTGTCC...AAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp GAGGCAAGACCTTACGCTTGCCTAAGGTCACCCAGCTaGTCTTTCCTTTCTCCTGCACAGTTACATCAGAAG +
Preference number: 3 (lower is better)
Translates to: EARPYACLRSPS*SFLSPAQLHQK
Trigger: CTTCTGATGTAACTGTGCAGGAGAAAGGAAAGAGCAGCTGGGTGACCTTAGGCAAGCGTAAGGTCTTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp AAGATTCAAAGAGTGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCCATGTGAAGATGTGCTaGCTTCCCCTTCACCTTCTG +
Preference number: 3 (lower is better)
Translates to: KIQRVPCWVSNWHEAFSSHVKMC*LPLHLL
Trigger: CAGAAGGTGAAGGGGAAGCAAGCACATCTTCACATG...GGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp ACTTATCAGGAACTGGAGCAAAGGTCACTCTTGCTATaGTTTAGCAGAGACTGGTGGCATTGTGCCCCTGCT +
Preference number: 3 (lower is better)
Translates to: TYQELEQRSLLL*FSRDWWHCAPA
Trigger: AGCAGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTCCAGTTCCTGATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp GAGGAACTTATCAGGAACTGGAGCAAAGGTCACTCTTaGTATGCTTTAGCAGAGACTGGTGGCATTGTGCCC +
Preference number: 3 (lower is better)
Translates to: EELIRNWSKGHS*YALAETGGIVP
Trigger: GGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTCCAGTTCCTGATAAGTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp GAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTaGTGGCATTGTGCCCCTGCTTTAGGGATCTGTGTA +
Preference number: 3 (lower is better)
Translates to: EQRSLLLCFSRD*WHCAPALGICV
Trigger: TACACAGATCCCTAAAGCAGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR TCA 72 bp TGGAATCCTCAACAATGCTGTGAGACATTCCCACTTTaGGTTGATAAGATGGGGCTCAGAGAGGCAAGACCT +
Preference number: 3 (lower is better)
Translates to: WNPQQCCETFPL*VDKMGLREARP
Trigger: AGGTCTTGCCTCTCTGAGCCCCATCTTATCAACTCAAAGTGGGAATGTCTCACAGCATTGTTGAGGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp TTTAAGATTCAAAGAGTGCCCTGCTGGGTTTCAAACTaGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTCT +
Preference number: 3 (lower is better)
Translates to: FKIQRVPCWVSN*HEAFSSFGPVS
Trigger: AGAAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR TCA 72 bp GGTATGAGGAAAGACTGTGAGTCAAATCATTGGCCTTaGGGAAACAGGAGTCTGGCAGGTTCAGTTCTTCTA +
Preference number: 3 (lower is better)
Translates to: GMRKDCESNHWP*GNRSLAGSVLL
Trigger: TAGAAGAACTGAACCTGCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGACTCACAGTCTTTCCTCATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR GCA 72 bp CTTTTTGCTGGGACCATGCCTCAGAGTTTACAAATCTaGTCCCCATGTACTATCTCCTGGAATCCTCAACAA +
Preference number: 3 (lower is better)
Translates to: LFAGTMPQSLQI*SPCTISWNPQQ
Trigger: TTGTTGAGGATTCCAGGAGATAGTACATGGGGAGCAGATTTGTAAACTCTGAGGCATGGTCCCAGCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp GGATTAATATACCTGCCACCCTTTTTGCTGGGACCATaGCTCAGAGTTTACAAATCTGCTCCCCATGTACTA +
Preference number: 3 (lower is better)
Translates to: GLIYLPPFLLGP*LRVYKSAPHVL
Trigger: TAGTACATGGGGAGCAGATTTGTAAACTCTGAGGCATGGTCCCAGCAAAAAGGGTGGCAGGTATATTAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp CAAGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCATTCCCACTTTGAGTaGATAAGATGGGGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: QDVVASLSSSAMIVNFLRHSHFE*IRWGSE
Trigger: CTCTGAGCCCCATCTTATCAACTCAAAGTGGGAATG...CCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp GTGAGACATGGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTGCCAGTTTCTCCCACTaGGAATGGGAGCATTTACCC +
Preference number: 3 (lower is better)
Translates to: VRHGVKDYFGALRFKECPASFSH*EWEHLP
Trigger: GGGTAAATGCTCCCATTCCAAGTGGGAGAAACTGGC...AGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp AGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTaGTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCC +
Preference number: 3 (lower is better)
Translates to: RLFWSFKIQRVP*WVSNWHEAFSS
Trigger: GGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp TGGCCTGGATGTGAGACATGGAGTCAAAGATTATTTTaGAGCTTTAAGATTCAAAGAGTGCCCTGCTGGGTT +
Preference number: 3 (lower is better)
Translates to: WPGCETWSQRLF*SFKIQRVPCWV
Trigger: AACCCAGCAGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCACATCCAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp GCAGGTTCAGTTCTTCTAATTCAATCACCAAGCGTCTaGTGCTATAATAGTCCTTCATCAGCTTCTGTAGGT +
Preference number: 3 (lower is better)
Translates to: AGSVLLIQSPSV*CYNSPSSASVG
Trigger: ACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR CCA 72 bp TTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTGCTaGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTT +
Preference number: 3 (lower is better)
Translates to: LFWSFKIQRVPC*VSNWHEAFSSF
Trigger: AAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTTAAAGCTCCAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp CCACTCCTTGCATCAGAGTGGCCTGGATGTGAGACATaGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAA +
Preference number: 3 (lower is better)
Translates to: PLLASEWPGCET*SQRLFWSFKIQ
Trigger: TTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCACATCCAGGCCACTCTGATGCAAGGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR-3UTR CAA 90 bp AATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGGTAACCCTGGTTTTGGTTCTGCATTCTTTAGGCTGTTaGGTTTTCTCTGAAGGTACA +
Preference number: 3 (lower is better)
Translates to: NSPSSASVGLQVTLVLVLHSLGC*VFSEGT
Trigger: TGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATG...CAGAACCAAAACCAGGGTTACCTGAAGACCTACAGAAGCTGATGAAGGACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR GCA 72 bp GTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTaGCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTA +
Preference number: 3 (lower is better)
Translates to: VKDYFGALRFKE*PAGFQTGMRPL
Trigger: TAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp GGTTCAGTTCTTCTAATTCAATCACCAAGCGTCTGCTaGTATAATAGTCCTTCATCAGCTTCTGTAGGTCTT +
Preference number: 3 (lower is better)
Translates to: GSVLLIQSPSVC*YNSPSSASVGL
Trigger: AAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR CCA 72 bp GAAATTTCTAAGCAGCAAAGTGTTCAAGAGGTGGCCTaGTTGCTTCTAAAAGCCTATGCTCATTTGCATAAG +
Preference number: 3 (lower is better)
Translates to: EISKQQSVQEVA*LLLKAYAHLHK
Trigger: CTTATGCAAATGAGCATAGGCTTTTAGAAGCAACCAGGCCACCTCTTGAACACTTTGCTGCTTAGAAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp CTAAGTAAGTGCAATGTGGGATCCTGCAGTGAATCCTaGAATAGAACAAGGACATTAGTGGAAAAATTGGAG +
Preference number: 3 (lower is better)
Translates to: LSKCNVGSCSES*NRTRTLVEKLE
Trigger: CTCCAATTTTTCCACTAATGTCCTTGTTCTATTCCAGGATTCACTGCAGGATCCCACATTGCACTTACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp CAGATGATCAGCATCAGGACCGATTTCTTCTCACTGTaGTTCTTCCTAAGTTTTACCCACTTAGGACAAATT +
Preference number: 3 (lower is better)
Translates to: QMISIRTDFFSL*FFLSFTHLGQI
Trigger: AATTTGTCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGATGCTGATCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
3UTR TCA 72 bp TGTCTTTTTATACGTTTACAAAGGGCCAAATTCACTTaGTGCTCTTTCTACCACTACCCTGCTGATGTGGTT +
Preference number: 3 (lower is better)
Translates to: CLFIRLQRAKFT*CSFYHYPADVV
Trigger: AACCACATCAGCAGGGTAGTGGTAGAAAGAGCATCAAGTGAATTTGGCCCTTTGTAAACGTATAAAAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR GCA 72 bp AAGATACAACAACTAAGTAAGTGCAATGTGGGATCCTaGAGTGAATCCTGGAATAGAACAAGGACATTAGTG +
Preference number: 3 (lower is better)
Translates to: KIQQLSKCNVGS*SESWNRTRTLV
Trigger: CACTAATGTCCTTGTTCTATTCCAGGATTCACTGCAGGATCCCACATTGCACTTACTTAGTTGTTGTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR TCA 72 bp AATATGAGGGATGTTTGGAACCTCCTAGAGACTTGTTaGACAGTTTTGACCAAAATGCTGATAGTGATATGG +
Preference number: 3 (lower is better)
Translates to: NMRDVWNLLETC*TVLTKMLIVIW
Trigger: CCATATCACTATCAGCATTTTGGTCAAAACTGTTCAACAAGTCTCTAGGAGGTTCCAAACATCCCTCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp GTCATGAAAGACAGGGAAATACTGAGGAACTGTCACTaGTCTGAAGAAACCAAAAAGATACAACAACTAAGT +
Preference number: 3 (lower is better)
Translates to: VMKDREILRNCH*SEETKKIQQLS
Trigger: ACTTAGTTGTTGTATCTTTTTGGTTTCTTCAGACCAGTGACAGTTCCTCAGTATTTCCCTGTCTTTCATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp ACCAGTGATGACTTCTTAGTTTTGATAACTCTATTATaGTTATACAAGAATTTAACACAGGGAAAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: TSDDFLVLITLL*LYKNLTQGKLR
Trigger: CCTGAGCTTTCCCTGTGTTAAATTCTTGTATAACCATAATAGAGTTATCAAAACTAAGAAGTCATCACTGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CCA 72 bp AAATCCAAATTGAAGGACATTCTACAAAATACACGATaGATACTGTTCAAAAGTGTGAAGGTCATGAAAGAC +
Preference number: 3 (lower is better)
Translates to: KSKLKDILQNTR*ILFKSVKVMKD
Trigger: GTCTTTCATGACCTTCACACTTTTGAACAGTATCCATCGTGTATTTTGTAGAATGTCCTTCAATTTGGATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp CAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGCCACAGGGGCAGAGCTaGCTAAGGCCTTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QRVQAPSLGSFHVLLGLWPQGQS*LRPWEP
Trigger: GGGCTCCCAAGGCCTTAGGCAGCTCTGCCCCTGTGG...CCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp GGGGCAGAGCTGCCTAAGGCCTTGGGAGCCCACTCCTaGCATCAGAGTGGCCTGGATGTGAGACATGGAGTC +
Preference number: 4 (lower is better)
Translates to: GAELPKALGAHS*HQSGLDVRHGV
Trigger: GACTCCATGTCTCACATCCAGGCCACTCTGATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp GTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTaGGGCTTATGGGTGTGCAGAAGGCAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VQAPSLGSFHVL*GLWVCRRQELR
Trigger: CCTCAGCTCTTGCCTTCTGCACACCCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGCGGCCGAGCTGCAGATaGTCAGCATCAGGACCGATT +
Preference number: 4 (lower is better)
Translates to: QHQPVKATMGTVPCRATGRPSCR*SASGPI
Trigger: AATCGGTCCTGATGCTGATCATCTGCAGCTCGGCCG...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGGTTGGGGGAGGGACCTaGTGGAAGGTGACTGGATCA +
Preference number: 4 (lower is better)
Translates to: QHQPVKATMGTVPCRATGVGGGT*WKVTGS
Trigger: TGATCCAGTCACCTTCCACCAGGTCCCTCCCCCAAC...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGGCAGAAGGCAAGAGCTaGGGTTTGGGAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVAEGKS*GLGASA
Trigger: GGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGC...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGCTACCACTACCCTGCTaGTGTGGTTTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QHQPVKATMGTVPCRATGLPLPC*CGLAVS
Trigger: GGACACAGCCAAACCACATCAGCAGGGTAGTGGTAG...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TTGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCGTACAGCTGAACCATTaGTTCAGAGGGTGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LLQRVQAPSLGSFHVLLGVQLNH*FRGCKP
Trigger: GGGCTTGCACCCTCTGAAGCAATGGTTCAGCTGTAC...GCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTGAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp CAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGAGACTGGTGGCATTGTaGCCCTGCTTTAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: QRVQAPSLGSFHVLLGLWRLVAL*PCFRDL
Trigger: CAGATCCCTAAAGCAGGGGCACAATGCCACCAGTCT...CCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGCCTGCTCCAGTCGGCTaGTTCTCCCACCACTCGTCT +
Preference number: 4 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVPAPVG*FSHHSS
Trigger: AGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGG...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp TGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTCTTCAGAGACCTTCGTaGCAGCCCTCCCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CPAGFQTGMRPLAPLGQFLQRPS*QPSPAP
Trigger: TGGGGCTGGGGAGGGCTGCCACGAAGGTCTCTGAAG...AAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp GCAGAGCTGCCTAAGGCCTTGGGAGCCCACTCCTTGCATCAGAGTGGCCTGGATCTGACTTGCACAGACTaGGCACTCCCATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AELPKALGAHSLHQSGLDLTCTD*ALPFPE
Trigger: TTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAG...ATCCAGGCCACTCTGATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp CAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGTCCAGCAACTTTACCTaGGCCTGGACCTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: QRVQAPSLGSFHVLLGLWSSNFT*AWTFMC
Trigger: GCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGA...CCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp AAGATTCAAAGAGTGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTCGTGGGCTAGGCCCTaGGCCCAGCTGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KIQRVPCWVSNWHEAFSSSWARP*AQLLCA
Trigger: TGCACAGAGCAGCTGGGCCCAGGGCCTAGCCCACGA...GGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp TGGGCCCAGCTGCTCTGTGCAGCCTTAGGACATGGCAGCCTAATTCCCAGCTGCAAGTCCAGGCTGAGGTaGTCTCAAATGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: WAQLLCAALGHGSLIPSCKSRLR*SQMEMR
Trigger: CCTCATCTCCATTTGAGACCACCTCAGCCTGGACTT...GCAGCTGGGAATTAGGCTGCCATGTCCTAAGGCTGCACAGAGCAGCTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp GCAGAGCTGCCTAAGGCCTTGGGAGCCCACTCCTTGCATCAGAGTGGCCTGGATTCAAATCATTGGCCTTaGGGAAACAGGAGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AELPKALGAHSLHQSGLDSNHWP*GNRSLA
Trigger: TGCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGA...ATCCAGGCCACTCTGATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGGGATCTGGTGGGAGGTaGTTAGATCATGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVGSGGR*LDHGGR
Trigger: TCTGCCCCCATGATCTAATCACCTCCCACCAGATCC...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCTTCTGGGCTGCTGCCTaGTCCAGTCGGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSFWAAA*SSRLVL
Trigger: GAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGAA...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGGCCCAGCTGCTCTGTaGAGCCTTAGGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: LGASASISEDVWKRLDVQGPAAL*SLRTWQ
Trigger: CTGCCATGTCCTAAGGCTGCACAGAGCAGCTGGGCC...CTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGGGGGAAATGTGGGGTTaGAGACCCTACACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVGEMWG*RPYTES
Trigger: GGACTCTGTGTAGGGTCTCCAACCCCACATTTCCCC...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGCTGTTTGGTTTTCTCTaGAGGTACAGGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: QRVQAPSLGSFHVLLGLWLFGFL*RYRNWN
Trigger: GTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAG...CCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TGCTGTCATCGACCTAATGAGCTCCAGGGCTCGGACGGCCGAGCTGCAGATGATTCAAATCATTGGCCTTaGGGAAACAGGAGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CCHRPNELQGSDGRAADDSNHWP*GNRSLA
Trigger: TGCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGA...ATCATCTGCAGCTCGGCCGTCCGAGCCCTGGAGCTCATTAGGTCGATGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR TCA 90 bp GCAGAGCTGCCTAAGGCCTTGGGAGCCCACTCCTTGCATCAGAGTGGCCTGGATACTTTGGGGGACTGTTaGGAAGGCATGATTGTGTTT +
Preference number: 4 (lower is better)
Translates to: AELPKALGAHSLHQSGLDTLGDC*EGMIVF
Trigger: AAACACAATCATGCCTTCTCAACAGTCCCCCAAAGT...ATCCAGGCCACTCTGATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TTGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCCAGTTAATGCTGGAATaGGTTAAGACTTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLQRVQAPSLGSFHVLLGQLMLE*VKTLGD
Trigger: GTCCCCCAAAGTCTTAACTCATTCCAGCATTAACTG...GCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTGAAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGACTGGAACTGTCTCCTaGTGCATCACTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: QHQPVKATMGTVPCRATGTGTVS*CITSVS
Trigger: AGACACAGAAGTGATGCAGCAGGAGACAGTTCCAGT...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp ATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGATGGGGACTGTACCCTaGAGAGCCACAGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ISEDVWKRLDVQAEVCYRMGTVP*RATGAE
Trigger: CTCTGCCCCTGTGGCTCTGCAGGGTACAGTCCCCAT...CCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGAGCCTAATTCCCAGCTaGCCCAGCTCCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LGASASISEDVWKRLDVQSLIPS*PSSSCD
Trigger: GTCACAGCTGGAGCTGGGGCAGCTGGGAATTAGGCT...CTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp CAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGCTCACTGCAGAAGTTTaGACAAGAGGAGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: QRVQAPSLGSFHVLLGLWLTAEV*TRGAKC
Trigger: ACATTTGGCTCCTCTTGTGCAAACTTCTGCAGTGAG...CCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp CCAAGCGTCTGCTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGGTACCCTGGGCTGCTGCCTaGTCCAGTCGGCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PSVCCYNSPSSASVGLQVPWAAA*SSRLVL
Trigger: GAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGGG...TACCTGAAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CCA 90 bp TTGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCAACTTTACCTGCGCCTaGACCTTTATGTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLQRVQAPSLGSFHVLLGNFTCA*TFMCFA
Trigger: TGCAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTT...GCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TGGGCCCAGCTGCTCTGTGCAGCCTTAGGACATGGCAGCCTAATTCCCAGCTGCTATGAGGAAAGACTGTaGGTCAAATCATTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WAQLLCAALGHGSLIPSCYEERL*VKSLAL
Trigger: CAAGGCCAATGATTTGACTCACAGTCTTTCCTCATA...GCAGCTGGGAATTAGGCTGCCATGTCCTAAGGCTGCACAGAGCAGCTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTTGCCTAGTGGAGCTGTaGGAAGAGAGCCATCATCCT +
Preference number: 4 (lower is better)
Translates to: CPAGFQTGMRPLAPLGQFCLVEL*EESHHP
Trigger: AGGATGATGGCTCTCTTCTCACAGCTCCACTAGGCA...AAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCACCTGCCACCCTTTTTaGTGGGACCATGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSTCHPF*WDHASE
Trigger: CTCTGAGGCATGGTCCCAGCAAAAAGGGTGGCAGGT...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp ATGATCAGCATCAGGACCGATTTCTTCTCACTGTGGTTCTTCCTAAGTTTTACCCACTGGGAGGGGCCCTaGGCTGCTGCCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: MISIRTDFFSLWFFLSFTHWEGP*AAACSS
Trigger: ACTGGAGCAGGCAGCAGCCCAGGGCCCCTCCCAGTG...GGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGATGCTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR GCA 90 bp CTGTGTCCCCACCCAAGTTTCATGTCGAATTGTAATTCCCAGTGTTGGGGGAGGGTCTCCGAGATCGTCTaGCATTTCAGCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LCPHPSFMSNCNSQCWGRVSEIV*HFSSGL
Trigger: GAGACCTGAGCTGAAATGGCAGACGATCTCGGAGAC...CCTCCCCCAACACTGGGAATTACAATTCGACATGAAACTTGGGTGGGGACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp CTGTGTCCCCACCCAAGTTTCATGTCGAATTGTAATTCCCAGTGTTGGGGGAGGGTTGGGGGAGGGATCTaGTGGGAGGTGATTAGATCA +
Preference number: 4 (lower is better)
Translates to: LCPHPSFMSNCNSQCWGRVGGGI*WEVIRS
Trigger: TGATCTAATCACCTCCCACCAGATCCCTCCCCCAAC...CCTCCCCCAACACTGGGAATTACAATTCGACATGAAACTTGGGTGGGGACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp ATTTCTCCCTTCACTCTCTTGCTCTCTTGTCGCCATGTGAAGATGTGCTTGCTTAGTCTGCTACAGGGGTaGAGCCCTCATGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ISPFTLLLSCRHVKMCLLSLLQG*SPHGEP
Trigger: AGGCTCTCCATGAGGGCTTCACCCCTGTAGCAGACT...AAGCAAGCACATCTTCACATGGCGACAAGAGAGCAAGAGAGTGAAGGGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCATGCTTCTGGGCTGCTaGCTGCTCCAGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEAMLLGC*LLQSAG
Trigger: ACCAGCCGACTGGAGCAGGCAGCAGCCCAGAAGCAT...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp CAGAAAAACACGGTCCGCTCAACAAGGATCATACACAAGCCGGTGATACTTTATCTGATGCTTCTGGGCTaGTGCCTGCTCCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: QKNTVRSTRIIHKPVILYLMLLG*CLLQSA
Trigger: AGCCGACTGGAGCAGGCAGCAGCCCAGAAGCATCAG...ATAAAGTATCACCGGCTTGTGTATGATCCTTGTTGAGCGGACCGTGTTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp GAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTGGTGGCATTGTGCCCCTCGCCATGTGAAGATGTaGTTGCTTCCCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: EQRSLLLCFSRDWWHCAPRHVKM*LLPLHL
Trigger: AAGGTGAAGGGGAAGCAAGCACATCTTCACATGGCG...AGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp TTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGGAATTGACATGGTTTaGCTCTGTGTCTCCACCCGA +
Preference number: 4 (lower is better)
Translates to: LGASASISEDVWKRLDVQGIDMV*LCVSTR
Trigger: TCGGGTGGAGACACAGAGCCAAACCATGTCAATTCC...CTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCCAAAGAGTGCCCTGCTaGGTTTCAAACTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSQRVPC*VSNWHE
Trigger: CTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTG...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp AAGATTCAAAGAGTGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCCTCCTTGCATCAGAGTaGCCTGGATGTGAGACATGG +
Preference number: 4 (lower is better)
Translates to: KIQRVPCWVSNWHEAFSSLLASE*PGCETW
Trigger: CCATGTCTCACATCCAGGCCACTCTGATGCAAGGAG...GGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp ATTTCTCCCTTCACTCTCTTGCTCTCTTGTCGCCATGTGAAGATGTGCTTGCTTAGCTGCCTAAGGCCTTaGGAGCCCACTCCTTGCATC +
Preference number: 4 (lower is better)
Translates to: ISPFTLLLSCRHVKMCLLSCLRP*EPTPCI
Trigger: GATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCT...AAGCAAGCACATCTTCACATGGCGACAAGAGAGCAAGAGAGTGAAGGGAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp GCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTaGGGCCAGTTTCTCCCACTTGGAATGGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: AGFQTGMRPLAP*GQFLPLGMGAF
Trigger: AAATGCTCCCATTCCAAGTGGGAGAAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGCCCTGGTTTTGGTTCTaGTTTTGCAAGAACATCAGT +
Preference number: 4 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVPWFWF*FCKNIS
Trigger: ACTGATGTTCTTGCAAAATCAGAACCAAAACCAGGG...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAATCACCAAGCGTCTGCTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTCGGCCGAGCTGCAGATaGTCAGCATCAGGACCGATT +
Preference number: 4 (lower is better)
Translates to: QSPSVCCYNSPSSASVGLRPSCR*SASGPI
Trigger: AATCGGTCCTGATGCTGATCATCTGCAGCTCGGCCG...AAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CCA 90 bp ATGATCAGCATCAGGACCGATTTCTTCTCACTGTGGTTCTTCCTAAGTTTTACCCCTGCTCCAGTCGGCTaGTTCTCCCACCACTCGTCT +
Preference number: 4 (lower is better)
Translates to: MISIRTDFFSLWFFLSFTPAPVG*FSHHSS
Trigger: AGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGG...GGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGATGCTGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CCA 90 bp TTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGATGTATGGAAACGCCTaGATGTCCAGGCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGASASISEDVWKRLDVQMYGNA*MSRQKS
Trigger: AGACTTCTGCCTGGACATCCAGGCGTTTCCATACAT...CTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCAGGCCGGGGTGGAATTaGCATGGTTTGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEARPGWN*HGLALC
Trigger: ACACAGAGCCAAACCATGTCAATTCCACCCCGGCCT...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCCTCAACACCAGCCTGTaGAAGCAACCATGGGGACTG +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEALNTSL*KQPWGL
Trigger: CAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTGAG...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp ATTTCTCCCTTCACTCTCTTGCTCTCTTGTCGCCATGTGAAGATGTGCTTGCTTTTGGGCTTATGGGTGTaGAGAAGGCAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ISPFTLLLSCRHVKMCLLLGLWV*RRQELR
Trigger: CCTCAGCTCTTGCCTTCTGCACACCCATAAGCCCAA...AAGCAAGCACATCTTCACATGGCGACAAGAGAGCAAGAGAGTGAAGGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTAAACAATGGATAAAATaGCTCCAGGGCACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPAGFQTGMRPLAPLGQFKQWIK*LQGTSE
Trigger: CTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTT...AAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp TTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGTTTGAGTTGATAAGATaGGGCTCAGAGAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: LGASASISEDVWKRLDVQFELIR*GSERQD
Trigger: GTCTTGCCTCTCTGAGCCCCATCTTATCAACTCAAA...CTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp CTGTGTCCCCACCCAAGTTTCATGTCGAATTGTAATTCCCAGTGTTGGGGGAGGGAAGAACATGAAATTTaGAAGAGGCCGGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LCPHPSFMSNCNSQCWGREEHEI*KRPGWN
Trigger: ATTCCACCCCGGCCTCTTCCAAATTTCATGTTCTTC...CCTCCCCCAACACTGGGAATTACAATTCGACATGAAACTTGGGTGGGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCTTACAGGCTCATAGGTaGAAGGAAGTTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSLQAHR*KEVALS
Trigger: AGACAAGGCAACTTCCTTCCACCTATGAGCCTGTAA...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTGAACTGTCACTGGTCTaGAGAAACCAAAAAGATACA +
Preference number: 4 (lower is better)
Translates to: CPAGFQTGMRPLAPLGQFELSLV*RNQKDT
Trigger: TGTATCTTTTTGGTTTCTTCAGACCAGTGACAGTTC...AAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TCACCAAGCGTCTGCTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGGCCGTCTCCTCTGAATaGTGTCATCGACCTAATGAG +
Preference number: 4 (lower is better)
Translates to: SPSVCCYNSPSSASVGLQAVSSE*CHRPNE
Trigger: CTCATTAGGTCGATGACAGCATTCAGAGGAGACGGC...CTGAAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR GCA 90 bp GAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTGGTGGCATTGTGCCCCTTGGAATCCTCAACAATaGTGTGAGACATTCCCACTT +
Preference number: 4 (lower is better)
Translates to: EQRSLLLCFSRDWWHCAPWNPQQ*CETFPL
Trigger: AAGTGGGAATGTCTCACAGCATTGTTGAGGATTCCA...AGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp ATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGATTCAAAGAGTGCCCTaGTGGGTTTCAAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: ISEDVWKRLDVQAEVCYRIQRVP*WVSNWH
Trigger: ATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAAT...CCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGCCTCTACTAGGGCAGTaGAGAGGGGAAATGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMPLLGQ*RGEMWG
Trigger: ACCCCACATTTCCCCTCTGCACTGCCCTAGTAGAGG...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp CTGTGTCCCCACCCAAGTTTCATGTCGAATTGTAATTCCCAGTGTTGGGGGAGGAATGAGTTAAGACTTTaGGGGACTGTTGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LCPHPSFMSNCNSQCWGRNELRL*GTVEKA
Trigger: TGCCTTCTCAACAGTCCCCCAAAGTCTTAACTCATT...CCTCCCCCAACACTGGGAATTACAATTCGACATGAAACTTGGGTGGGGACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCTGCAGCCTTAGGACATaGCAGCCTAATTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEACSLRT*QPNSQL
Trigger: CAGCTGGGAATTAGGCTGCCATGTCCTAAGGCTGCA...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp GAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTGGTGGCATTGTGCCCCTATGCTGATAGTGATATaGACAATGAAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EQRSLLLCFSRDWWHCAPMLIVI*TMKSRL
Trigger: CAGCCTGGACTTCATTGTCCATATCACTATCAGCAT...AGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp GAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTGGTGGCATTGTGCCCCTTGTTGCCACAAGATGTaGTTGCATCCCTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: EQRSLLLCFSRDWWHCAPCCHKM*LHPFHL
Trigger: AAGATGAAAGGGATGCAACCACATCTTGTGGCAACA...AGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAAGGGGGAGGGATCTGGTaGGAGGTGATTAGATCATGG +
Preference number: 4 (lower is better)
Translates to: FELGRDDLGYPAEISKQQGGGIW*EVIRSW
Trigger: CCATGATCTAATCACCTCCCACCAGATCCCTCCCCC...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACGGCCGAGCTGCAGATaGTCAGCATCAGGACCGATT +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTRPSCR*SASGPI
Trigger: AATCGGTCCTGATGCTGATCATCTGCAGCTCGGCCG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421999.8
ENST00000489081.5
ENST00000497345.1
CDS-3UTR GCA 90 bp ATCAGCTTCTGTAGGTCTTCAGGTAACCCTGGTTTTGGTTCTGATTTTGCAAGAGTCTCCGAGATCGTCTaGCATTTCAGCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ISFCRSSGNPGFGSDFARVSEIV*HFSSGL
Trigger: GAGACCTGAGCTGAAATGGCAGACGATCTCGGAGAC...TCTTGCAAAATCAGAACCAAAACCAGGGTTACCTGAAGACCTACAGAAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR GCA 90 bp ATTTCTCCCTTCACTCTCTTGCTCTCTTGTCGCCATGTGAAGATGTGCTTGCTTAGGTTTGGGAGCCTCTaGCTCAATTTCAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: ISPFTLLLSCRHVKMCLLRFGSL*LNFRGC
Trigger: ACATCCTCTGAAATTGAGGCAGAGGCTCCCAAACCT...AAGCAAGCACATCTTCACATGGCGACAAGAGAGCAAGAGAGTGAAGGGAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp ATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGAAATTCAAGCTCACTaGAGAAGTTTGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: ISEDVWKRLDVQAEVCYREIQAH*RSLHKR
Trigger: CCTCTTGTGCAAACTTCTGCAGTGAGCTTGAATTTC...CCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp GCTCTGTGTCTCCACCCGAATCTTATGTTGAATTATAATTCCCAATGTTGGGGGGGGGTGGAATTGACATaGTTTGGCTCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALCLHPNLMLNYNSQCWGGVELT*FGSVSP
Trigger: TGGAGACACAGAGCCAAACCATGTCAATTCCACCCC...CCCCCAACATTGGGAATTATAATTCAACATAAGATTCGGGTGGAGACACAGAGC
47% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp TTGGGAGCCTCTGCCTCAATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGCCTGGATGTGAGACATaGAGTCAAAGATTATTTTGG +
Preference number: 4 (lower is better)
Translates to: LGASASISEDVWKRLDVQPGCET*SQRLFW
Trigger: CCAAAATAATCTTTGACTCCATGTCTCACATCCAGG...CTGGACATCCAGGCGTTTCCATACATCCTCTGAAATTGAGGCAGAGGCTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp ATCCTCAACAATGCTGTGAGACATTCCCACTTTGAGTaGATAAGATGGGGCTCAGAGAGGCAAGACCTTACG +
Preference number: 4 (lower is better)
Translates to: ILNNAVRHSHFE*IRWGSERQDLT
Trigger: CGTAAGGTCTTGCCTCTCTGAGCCCCATCTTATCAACTCAAAGTGGGAATGTCTCACAGCATTGTTGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp GTGAGACATGGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTTTCTGCCAAGTTTCCTaGGGCCTCTCAGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: VRHGVKDYFGALRFKECPFCQVS*GLSAMP
Trigger: AGGCATGGCTGAGAGGCCTCAGGAAACTTGGCAGAA...AGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAGAAAAACACGGTCCGCTCAACAAGGATCATACACAAGCCGGTGATACTTTATAAGACAGGGAAATACTaGGGAACTGTCACTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QKNTVRSTRIIHKPVILYKTGKY*GTVTGL
Trigger: CAGACCAGTGACAGTTCCTCAGTATTTCCCTGTCTT...ATAAAGTATCACCGGCTTGTGTATGATCCTTGTTGAGCGGACCGTGTTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp CAATCACCAAGCGTCTGCTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTTTCTCCTTCACCATCTaGTGCTTCTCAATCCCTACC +
Preference number: 4 (lower is better)
Translates to: QSPSVCCYNSPSSASVGLFSFTI*CFSIPT
Trigger: GGTAGGGATTGAGAAGCATCAGATGGTGAAGGAGAA...AAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR GCA 90 bp CAAGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGGCCGTCTCCTCTGAATaGTGTCATCGACCTAATGAG +
Preference number: 4 (lower is better)
Translates to: QDVVASLSSSAMIVNFLRAVSSE*CHRPNE
Trigger: CTCATTAGGTCGATGACAGCATTCAGAGGAGACGGC...CCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TCATCAGCTTCTGTAGGTCTTCAGGTAACCCTGGTTTTGGTTCTGATTTTGCAATCCAGCAACTTTACCTaGGCCTGGACCTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: SSASVGLQVTLVLVLILQSSNFT*AWTFMC
Trigger: GCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGA...TTGCAAAATCAGAACCAAAACCAGGGTTACCTGAAGACCTACAGAAGCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR GCA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGGTGGCATTGTGCCCCTaGTTTAGGGATCTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMVALCP*FRDLCN
Trigger: GTTACACAGATCCCTAAAGCAGGGGCACAATGCCAC...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCAGGTCACTCTTGCTATaGTTTAGCAGAGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEARSLLL*FSRDWW
Trigger: CCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCT...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp GCTCTGTGTCTCCACCCGAATCTTATGTTGAATTATAATTCCCAATGTTGGGGGGCCACAAGATGTGGTTaGATCCCTTTCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ALCLHPNLMLNYNSQCWGATRCG*IPFIFC
Trigger: GCAGAAGATGAAAGGGATGCAACCACATCTTGTGGC...CCCCCAACATTGGGAATTATAATTCAACATAAGATTCGGGTGGAGACACAGAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp GTGTCTCCTTCTCCTTCACCATCTGATGCTTCTCAATCCCTACCTTCATCTTCTAACTTTACCTGCGCCTaGACCTTTATGTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VSPSPSPSDASQSLPSSSNFTCA*TFMCFA
Trigger: TGCAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTT...AGAAGATGAAGGTAGGGATTGAGAAGCATCAGATGGTGAAGGAGAAGGAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CCA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAATGCCACCCTTTTTGCTaGGACCATGCCTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: FELGRDDLGYPAEISKQQCHPFC*DHASEF
Trigger: AAACTCTGAGGCATGGTCCCAGCAAAAAGGGTGGCA...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp CGTTTAAAAGTGTGTGGCATTTCTCCCTTCACTCTCTaGCTCTCTTGTCGCCATGTGAAGATGTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RLKVCGISPFTL*LSCRHVKMCLL
Trigger: AAGCAAGCACATCTTCACATGGCGACAAGAGAGCAAGAGAGTGAAGGGAGAAATGCCACACACTTTTAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp GTGGAAGCAACTTTGAAACTGGGTAACGGGGAGAAGTaGCAACAGTTTGGAAGGATCAGAAGAAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: VEATLKLGNGEK*QQFGRIRRRQE
Trigger: TTCCTGTCTTCTTCTGATCCTTCCAAACTGTTGCAACTTCTCCCCGTTACCCAGTTTCAAAGTTGCTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TCTTTAGGCTGTTTGGTTTTCTCTGAAGGTACAGGAACTGGAACTGTCTCCTGCTATGAGGAAAGACTGTaGGTCAAATCATTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLGCLVFSEGTGTGTVSCYEERL*VKSLAL
Trigger: CAAGGCCAATGATTTGACTCACAGTCTTTCCTCATA...GCAGGAGACAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGCCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR TCA 90 bp CAGAAAAACACGGTCCGCTCAACAAGGATCATACACAAGCCGGTGATACTTTATAATGTGAGAAGAACATaGAATTTGGAAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QKNTVRSTRIIHKPVILYNVRRT*NLEEAG
Trigger: CCCGGCCTCTTCCAAATTTCATGTTCTTCTCACATT...ATAAAGTATCACCGGCTTGTGTATGATCCTTGTTGAGCGGACCGTGTTTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp GCTCTGTGTCTCCACCCGAATCTTATGTTGAATTATAATTCCCAATGTTGGGGGGGTCTCAAATGGAGATaGGGAACTTATCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: ALCLHPNLMLNYNSQCWGGLKWR*GTYQEL
Trigger: CAGTTCCTGATAAGTTCCTCATCTCCATTTGAGACC...CCCCCAACATTGGGAATTATAATTCAACATAAGATTCGGGTGGAGACACAGAGC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp ATGATCAGCATCAGGACCGATTTCTTCTCACTGTGGTTCTTCCTAAGTTTTACCACTGGAACTGTCTCCTaGTGCATCACTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: MISIRTDFFSLWFFLSFTTGTVS*CITSVS
Trigger: AGACACAGAAGTGATGCAGCAGGAGACAGTTCCAGT...GGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGATGCTGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR GCA 90 bp GTGTCTCCTTCTCCTTCACCATCTGATGCTTCTCAATCCCTACCTTCATCTTCTCAATCACCAAGCGTCTaGTGCTATAATAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VSPSPSPSDASQSLPSSSQSPSV*CYNSPS
Trigger: TGAAGGACTATTATAGCAGCAGACGCTTGGTGATTG...AGAAGATGAAGGTAGGGATTGAGAAGCATCAGATGGTGAAGGAGAAGGAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR GCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCGTAACGGGGAGAAGTTaGAACAGTTTGGAAGGATCA +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEAVTGRS*NSLEGS
Trigger: TGATCCTTCCAAACTGTTGCAACTTCTCCCCGTTAC...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACAGTTTCCTCAGCACTTTaGCCTCGTGTCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTVSSAL*PRVSCD
Trigger: GTCACAGGAGACACGAGGGCAAAGTGCTGAGGAAAC...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489081.5
CDS-3UTR CCA 90 bp ATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGATCAGACTTTGGAGTTaGACTTTTCAGTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: ISEDVWKRLDVQAEVCYRIRLWS*TFQLML
Trigger: CAGCATTAACTGAAAAGTCCAACTCCAAAGTCTGAT...CCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp CAAGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGTTCTCCCACTTGGAATaGGAGCATTTACCCAATGCC +
Preference number: 4 (lower is better)
Translates to: QDVVASLSSSAMIVNFLRFSHLE*EHLPNA
Trigger: GGCATTGGGTAAATGCTCCCATTCCAAGTGGGAGAA...CCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp AAGATTCAAAGAGTGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTACAGTCTGTGGAACTaGAAGTCAATTAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: KIQRVPCWVSNWHEAFSSYSLWN*KSIKPL
Trigger: AAGAGGTTTAATTGACTTCCAGTTCCACAGACTGTA...GGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp ATGATCAGCATCAGGACCGATTTCTTCTCACTGTGGTTCTTCCTAAGTTTTACCCTGTTTGGTTTTCTCTaGAGGTACAGGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: MISIRTDFFSLWFFLSFTLFGFL*RYRNWN
Trigger: GTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAG...GGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGATGCTGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR TCA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAAAAGAAGACAGGAATATaGGGGATGTTTGGAACCTCC +
Preference number: 4 (lower is better)
Translates to: FELGRDDLGYPAEISKQQKKTGI*GMFGTS
Trigger: GGAGGTTCCAAACATCCCTCATATTCCTGTCTTCTT...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACAGCCGTCTCCTCTGAATaGTGTCATCGACCTAATGAG +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTAVSSE*CHRPNE
Trigger: CTCATTAGGTCGATGACAGCATTCAGAGGAGACGGC...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATCCAGCAACTTTACCTaGGCCTGGACCTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTSSNFT*AWTFMC
Trigger: GCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR GCA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGCTCTTTCCTTTCTCCTaGACAGTTACATCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMLFPFS*TVTSEA
Trigger: GGCTTCTGATGTAACTGTGCAGGAGAAAGGAAAGAG...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp ATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGTTCTTTTCCTGGTCTTaGTGGTATTCTCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ISEDVWKRLDVQAEVCYRFFSWS*WYSLFF
Trigger: AAAGAAAAGAGAATACCACCAAGACCAGGAAAAGAA...CCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp GCTGTTTGGTTTTCTCTGAAGGTACAGGAACTGGAACTGTCTCCTGCTGCATCATCTTTCTTCTTTTCCTaGTCTTGGTGGTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: AVWFSLKVQELELSPAASSFFFS*SWWYSL
Trigger: AAGAGAATACCACCAAGACCAGGAAAAGAAGAAAGA...TGATGCAGCAGGAGACAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CCA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAACTTACACTGTGTACCTaGATATGCTGTAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: FELGRDDLGYPAEISKQQLTLCT*ICCRHS
Trigger: TGAGTGCCTACAGCATATCCAGGTACACAGTGTAAG...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp CAATGTGAGAATGGATTAATATACCTGCCACCCTTTTaGCTGGGACCATGCCTCAGAGTTTACAAATCTGCT +
Preference number: 4 (lower is better)
Translates to: QCENGLIYLPPF*LGPCLRVYKSA
Trigger: AGCAGATTTGTAAACTCTGAGGCATGGTCCCAGCAAAAAGGGTGGCAGGTATATTAATCCATTCTCACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp ATTTCTAAGCAGCAAAGTGTTCAAGAGGTGGCCTGGTaGCTTCTAAAAGCCTATGCTCATTTGCATAAGCAG +
Preference number: 4 (lower is better)
Translates to: ISKQQSVQEVAW*LLKAYAHLHKQ
Trigger: CTGCTTATGCAAATGAGCATAGGCTTTTAGAAGCAACCAGGCCACCTCTTGAACACTTTGCTGCTTAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATCAAATCATTGGCCTTaGGGAAACAGGAGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTSNHWP*GNRSLA
Trigger: TGCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421999.8
ENST00000489081.5
ENST00000497345.1
CDS-3UTR TCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATTCTCCTTCACCATCTaGTGCTTCACCATGCATTCC +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTFSFTI*CFTMHS
Trigger: GGAATGCATGGTGAAGCATCAGATGGTGAAGGAGAA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489081.5
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACAACTGGAACTGTCTCCTaGTGCATCACTTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTTGTVS*CITSVS
Trigger: AGACACAGAAGTGATGCAGCAGGAGACAGTTCCAGT...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR GCA 90 bp CAAGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGTCACCAAGCGTCTGCTaGTATAATAGTCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: QDVVASLSSSAMIVNFLRSPSVC*YNSPSS
Trigger: TGATGAAGGACTATTATAGCAGCAGACGCTTGGTGA...CCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TCATCAGCTTCTGTAGGTCTTCAGGTAACCCTGGTTTTGGTTCTGATTTTGCAATCACCAAGCGTCTGCTaGTATAATAGTCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SSASVGLQVTLVLVLILQSPSVC*YNSPSS
Trigger: TGATGAAGGACTATTATAGCAGCAGACGCTTGGTGA...TTGCAAAATCAGAACCAAAACCAGGGTTACCTGAAGACCTACAGAAGCTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR GCA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAACAATCACCAAGCGTCTaGTGCTATAATAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FELGRDDLGYPAEISKQQQSPSV*CYNSPS
Trigger: TGAAGGACTATTATAGCAGCAGACGCTTGGTGATTG...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATATAATTCCCAATGTTaGGGGAGGGACCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTYNSQC*GRDLVE
Trigger: TTCCACCAGGTCCCTCCCCCAACATTGGGAATTATA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCAGAAAAGCCATTTTCTaGGGAGAAATTCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEARKAIF*GEIQAH
Trigger: GTGAGCTTGAATTTCTCCCCAGAAAATGGCTTTTCT...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp TTTATTTTACAGGCTCATAGGTGGAAGGAAGTTGCCTaGTCTCAGATCAGACTTTGGAGTTGGACTTTTCAG +
Preference number: 4 (lower is better)
Translates to: FILQAHRWKEVA*SQIRLWSWTFQ
Trigger: CTGAAAAGTCCAACTCCAAAGTCTGATCTGAGACAAGGCAACTTCCTTCCACCTATGAGCCTGTAAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACTGTTTGGTTTTCTCTaGAGGTACAGGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTLFGFL*RYRNWN
Trigger: GTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR TCA 90 bp CAAGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCTCCTAGAGACTTGTTaGACAGTTTTGACCAAAATG +
Preference number: 4 (lower is better)
Translates to: QDVVASLSSSAMIVNFLRLLETC*TVLTKM
Trigger: CATTTTGGTCAAAACTGTTCAACAAGTCTCTAGGAG...CCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR TCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACAAGGGCCAAATTCACTTaGTGCTCTTTCTACCACTAC +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTRAKFT*CSFYHY
Trigger: GTAGTGGTAGAAAGAGCATCAAGTGAATTTGGCCCT...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATGCAATGTGGGATCCTaGAGTGAATCCTGGAATAGA +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTCNVGS*SESWNR
Trigger: TCTATTCCAGGATTCACTGCAGGATCCCACATTGCA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACATGCATTCCGATGTTaGTCTAGAGTTTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTHAFRC*SRVSSA
Trigger: TGCTGAGGAAACTCTAGAGCAACATCGGAATGCATG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489081.5
CDS-3UTR GCA 90 bp CAATCACCAAGCGTCTGCTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTAGGTTTTCAGGTATTTaGTTGCACAAACTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QSPSVCCYNSPSSASVGLRFSGI*LHKLLK
Trigger: CTTCAAGAGTTTGTGCAAGCAAATACCTGAAAACCT...AAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACAAACTTTACCTGCGCCTaGACCTTTATGTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTNFTCA*TFMCFA
Trigger: TGCAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTT...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR TCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACCCTGGTTTTGGTTCTaGTTTTGCAAGAACATCAGT +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTPWFWF*FCKNIS
Trigger: ACTGATGTTCTTGCAAAATCAGAACCAAAACCAGGG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR TCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATATGAGGAAAGACTGTaGGTCAAATCATTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTYEERL*VKSLAL
Trigger: CAAGGCCAATGATTTGACTCACAGTCTTTCCTCATA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421999.8
ENST00000489081.5
ENST00000497345.1
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATCACCAAGCGTCTGCTaGTATAATAGTCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTSPSVC*YNSPSS
Trigger: TGATGAAGGACTATTATAGCAGCAGACGCTTGGTGA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421999.8
ENST00000489081.5
ENST00000497345.1
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACAATCACCAAGCGTCTaGTGCTATAATAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTQSPSV*CYNSPS
Trigger: TGAAGGACTATTATAGCAGCAGACGCTTGGTGATTG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421999.8
ENST00000489081.5
ENST00000497345.1
CDS-3UTR GCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACAGAGTTTACAAATCTaGTCCCCATGTACTATCTCC +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTQSLQI*SPCTIS
Trigger: GGAGATAGTACATGGGGAGCAGATTTGTAAACTCTG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCAAGCCTATGCTCATTTaGATAAGCAGAGATAACTTA +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEAKPMLI*ISRDNL
Trigger: TAAGTTATCTCTGCTTATGCAAATGAGCATAGGCTT...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp AATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGGTAACCCTGGTTTTGGTTCTGTTCTTTTCCTGGTCTTaGTGGTATTCTCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: NSPSSASVGLQVTLVLVLFFSWS*WYSLFF
Trigger: AAAGAAAAGAGAATACCACCAAGACCAGGAAAAGAA...CAGAACCAAAACCAGGGTTACCTGAAGACCTACAGAAGCTGATGAAGGACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CCA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAATCTTTCTTCTTTTCCTaGTCTTGGTGGTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: FELGRDDLGYPAEISKQQSFFFS*SWWYSL
Trigger: AAGAGAATACCACCAAGACCAGGAAAAGAAGAAAGA...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCTTGGTACCAGAGAAGTaGGACATTTCTATAAAGATA +
Preference number: 4 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEALVPEK*DISIKI
Trigger: TATCTTTATAGAAATGTCCCACTTCTCTGGTACCAA...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp CAGGAATATGAGGGATGTTTGGAACCTCCTAGAGACTaGTTGAACAGTTTTGACCAAAATGCTGATAGTGAT +
Preference number: 4 (lower is better)
Translates to: QEYEGCLEPPRD*LNSFDQNADSD
Trigger: ATCACTATCAGCATTTTGGTCAAAACTGTTCAACAAGTCTCTAGGAGGTTCCAAACATCCCTCATATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR GCA 90 bp GTGAGACATGGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTTTTTTGCTGGGACCATaGCTCAGAGTTTACAAATCT +
Preference number: 4 (lower is better)
Translates to: VRHGVKDYFGALRFKECPFLLGP*LRVYKS
Trigger: AGATTTGTAAACTCTGAGGCATGGTCCCAGCAAAAA...AGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp GTGAGACATGGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTTCCTGCAGTGAATCCTaGAATAGAACAAGGACATTA +
Preference number: 4 (lower is better)
Translates to: VRHGVKDYFGALRFKECPSCSES*NRTRTL
Trigger: TAATGTCCTTGTTCTATTCCAGGATTCACTGCAGGA...AGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
3UTR CAA 72 bp GAATATGAGGGATGTTTGGAACCTCCTAGAGACTTGTaGAACAGTTTTGACCAAAATGCTGATAGTGATATG +
Preference number: 4 (lower is better)
Translates to: EYEGCLEPPRDL*NSFDQNADSDM
Trigger: CATATCACTATCAGCATTTTGGTCAAAACTGTTCAACAAGTCTCTAGGAGGTTCCAAACATCCCTCATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATCTTTCTTCTTTTCCTaGTCTTGGTGGTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTSFFFS*SWWYSL
Trigger: AAGAGAATACCACCAAGACCAGGAAAAGAAGAAAGA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR CCA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATTCTTTTCCTGGTCTTaGTGGTATTCTCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTFFSWS*WYSLFF
Trigger: AAAGAAAAGAGAATACCACCAAGACCAGGAAAAGAA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS GCA 90 bp TGCTTGCACAAACTCTTGAAGACACTGGGAGGGGCCCTGGGCTGCTaGCTGCTCCAGTCGGCTGGTTCTCCCACCACTCGTCTCCGAGAT +
Preference number: 5 (lower is better)
Translates to: CLHKLLKTLGGALGC*LLQSAGSPTTRLRD
Trigger: ATCTCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGGGCCCCTCCCAGTGTCTTCAAGAGTTTGTGCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS GCA 90 bp GTGGAGCCTATGGGTAGAGATGGGACAGTCTTCTGGGCTGCTGCCTaGTCCAGTCGGCTGGTTCTCCCACCACTCGTCTCCGAGATCGTC +
Preference number: 5 (lower is better)
Translates to: VEPMGRDGTVFWAAA*SSRLVLPPLVSEIV
Trigger: GACGATCTCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGAAGACTGTCCCATCTCTACCCATAGGCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS-3UTR CAA 90 bp CAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCTTATGGGAGCTGCCTAAGGCCTaGGGAGCCCACTCCTTGCAT +
Preference number: 5 (lower is better)
Translates to: QRVQAPSLGSFHVLLGLWELPKA*GAHSLH
Trigger: ATGCAAGGAGTGGGCTCCCAAGGCCTTAGGCAGCTC...CCATAAGCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS GCA 90 bp ATTTGCTTGCACAAACTCTTGAAGACACTGGGAGGGGCCCTGGGCTaGTGCCTGCTCCAGTCGGCTGGTTCTCCCACCACTCGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: ICLHKLLKTLGGALG*CLLQSAGSPTTRLR
Trigger: TCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGGGCCCCTCCCAGTGTCTTCAAGAGTTTGTGCAAGCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS GCA 90 bp TGCTCCAGTCGGCTGGTTCTCCCACCACTCGTCTCCGAGATCGTCTaGCATTTCAGCTCAGGTCTCGACGTGGGCAGAACATCACGGGTA +
Preference number: 5 (lower is better)
Translates to: CSSRLVLPPLVSEIV*HFSSGLDVGRTSRV
Trigger: TACCCGTGATGTTCTGCCCACGTCGAGACCTGAGCTGAAATGGCAGACGATCTCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421999.8
ENST00000463526.1
ENST00000491299.5
ENST00000496116.1
CDS CCA 90 bp CCTTCACCATCTGATGCTTCTGGGCTGCTGCCTGCTCCAGTCGGCTaGTTCTCCCACCACTCGTCTCCGAGATCGTCTGCCATTTCAGCT +
Preference number: 5 (lower is better)
Translates to: PSPSDASGLLPAPVG*FSHHSSPRSSAISA
Trigger: AGCTGAAATGGCAGACGATCTCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGAAGCATCAGATGGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp CAACACCAGCCTGTGAAAGCAACCATGGGGACTGTACCCTGCAGAGCCACAGGGGCCAGTTTCTCCCACTaGGAATGGGAGCATTTACCC +
Preference number: 5 (lower is better)
Translates to: QHQPVKATMGTVPCRATGASFSH*EWEHLP
Trigger: GGGTAAATGCTCCCATTCCAAGTGGGAGAAACTGGC...CCCTGTGGCTCTGCAGGGTACAGTCCCCATGGTTGCTTTCACAGGCTGGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp TGGGCCCAGCTGCTCTGTGCAGCCTTAGGACATGGCAGCCTAATTCCCAGCTGCGACTTTGGGGGACTGTaGAGAAGGCATGATTGTGTT +
Preference number: 5 (lower is better)
Translates to: WAQLLCAALGHGSLIPSCDFGGL*RRHDCV
Trigger: AACACAATCATGCCTTCTCAACAGTCCCCCAAAGTC...GCAGCTGGGAATTAGGCTGCCATGTCCTAAGGCTGCACAGAGCAGCTGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp TTGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGCTGTTGGGCATAGGTGGAAGGAAGTaGCCTTGTCTCAGATCAGAC +
Preference number: 5 (lower is better)
Translates to: LLQRVQAPSLGSFHVLLGIGGRK*PCLRSD
Trigger: GTCTGATCTGAGACAAGGCAACTTCCTTCCACCTAT...GCCCAACAGCACGTGGAAGCTGCCAAGGCTTGGGGCTTGCACCCTCTGAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp TGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTAGGGGAAATGTGGGGTaGGAGACCCTACACAGAGTC +
Preference number: 5 (lower is better)
Translates to: CPAGFQTGMRPLAPLGQFRGNVG*ETLHRV
Trigger: GACTCTGTGTAGGGTCTCCAACCCCACATTTCCCCT...AAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS GCA 90 bp GCATATATTGAGGTGGGTGTCCAAATGAGTTTTAAAAACCTGGGCTaGTGCCTGCTCCAGTCGGCTGGTTCTCCCACCACTCGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: AYIEVGVQMSFKNLG*CLLQSAGSPTTRLR
Trigger: TCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGGTTTTTAAAACTCATTTGGACACCCACCTCAATATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463526.1
CDS-3UTR CAA 90 bp TGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTTTGGGCCAGTTTTCCCCCTTCACTCTCTaGCTCTCTTGTTGCCACAAG +
Preference number: 5 (lower is better)
Translates to: CPAGFQTGMRPLAPLGQFSPFTL*LSCCHK
Trigger: CTTGTGGCAACAAGAGAGCAAGAGAGTGAAGGGGGA...AAACTGGCCCAAAGGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS GCA 90 bp TATATTGAGGTGGGTGTCCAAATGAGTTTTAAAAACCTGGGCTGCTaGCTGCTCCAGTCGGCTGGTTCTCCCACCACTCGTCTCCGAGAT +
Preference number: 5 (lower is better)
Translates to: YIEVGVQMSFKNLGC*LLQSAGSPTTRLRD
Trigger: ATCTCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGGTTTTTAAAACTCATTTGGACACCCACCTCAATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463526.1
CDS-3UTR CAA 90 bp TCACCAAGCGTCTGCTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGCTGCGGAGAATCACGTaGTCTCAAAGCCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: SPSVCCYNSPSSASVGLQLRRIT*SQSQAA
Trigger: GGCCGCCTGGCTTTGAGACAACGTGATTCTCCGCAG...CTGAAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CAA 90 bp TGGGTGTGCAGAAGGCAAGAGCTGAGGTTTGGGAGCCTCTGCCTCAATTTCAGACATGTGAAGATGTGCTaGCTTCCCCTTCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: WVCRRQELRFGSLCLNFRHVKMC*LPLHLL
Trigger: CAGAAGGTGAAGGGGAAGCAAGCACATCTTCACATG...TCTGAAATTGAGGCAGAGGCTCCCAAACCTCAGCTCTTGCCTTCTGCACACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp CAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTCTGCTACAGGGGTGGGACAGATTTTCCCCTaGCTGTTCTGCTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: QRMYGNAWMSRQKSATGVGQIFP*LFCCSH
Trigger: ATGAGAACAGCAGAACAGCAAGGGGAAAATCTGTCC...CACCCCTGTAGCAGACTTCTGCCTGGACATCCAGGCGTTTCCATACATCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS TCA 90 bp GCAGCCCTAATGATCCTACAACCTGAGAAAATGTCAACTTGGCTGTaGTGGGAAAAGAGTCCCACATGGCTCCCAGCACCACCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: AALMILQPEKMSTWL*WEKSPTWLPAPPSQ
Trigger: TTGAGAGGGTGGTGCTGGGAGCCATGTGGGACTCTTTTCCCATCACAGCCAAGTTGACATTTTCTCAGGTTGTAGGATCATTAGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS GCA 90 bp CTCCTTCTCCTTCACCATCTGATGCTTCACCATGCATTCCGATGTTaGTCTAGAGTTTCCTCAGCACTTTGCCCTCGTGTCTCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: LLLLHHLMLHHAFRC*SRVSSALCPRVSCD
Trigger: GTCACAGGAGACACGAGGGCAAAGTGCTGAGGAAACTCTAGAGCAACATCGGAATGCATGGTGAAGCATCAGATGGTGAAGGAGAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489081.5
CDS-3UTR CAA 90 bp CCAAGCGTCTGCTGCTATAATAGTCCTTCATCAGCTTCTGTAGGTCTTCAGGTATGCTTGCACAAACTCTaGAAGACACTGGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: PSVCCYNSPSSASVGLQVCLHKL*KTLGGA
Trigger: GGCCCCTCCCAGTGTCTTCAAGAGTTTGTGCAAGCA...TACCTGAAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CAA 90 bp AAGATTCAAAGAGTGCCCTGCTGGGTTTCAAACTGGCATGAGGCCTTTAGCTCCTGGAAGGAAGTTGCCTaGTCTCAGATCAGACTTTGG +
Preference number: 5 (lower is better)
Translates to: KIQRVPCWVSNWHEAFSSWKEVA*SQIRLW
Trigger: CCAAAGTCTGATCTGAGACAAGGCAACTTCCTTCCA...GGAGCTAAAGGCCTCATGCCAGTTTGAAACCCAGCAGGGCACTCTTTGAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS CCA 90 bp CCCACATGGCTCCCAGCACCACCCTCTCAAAATGTCACAACCTCTTaGCATAGGACATCCTGTTCAGCCTGTAATAGTCATTCAAATGAA +
Preference number: 5 (lower is better)
Translates to: PTWLPAPPSQNVTTS*HRTSCSACNSHSNE
Trigger: TTCATTTGAATGACTATTACAGGCTGAACAGGATGTCCTATGCCAAGAGGTTGTGACATTTTGAGAGGGTGGTGCTGGGAGCCATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS-3UTR CAA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACTGCGGAGAATCACGTaGTCTCAAAGCCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTLRRIT*SQSQAA
Trigger: GGCCGCCTGGCTTTGAGACAACGTGATTCTCCGCAG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp GAGCAAAGGTCACTCTTGCTATGCTTTAGCAGAGACTGGTGGCATTGTGCCCCTGCAGAGTATAAAAGCTaGAAAATTTGCAGCCTGACC +
Preference number: 5 (lower is better)
Translates to: EQRSLLLCFSRDWWHCAPAEYKS*KICSLT
Trigger: GGTCAGGCTGCAAATTTTCAAGCTTTTATACTCTGC...AGGGGCACAATGCCACCAGTCTCTGCTAAAGCATAGCAAGAGTGACCTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGCAGAGACTGGTGGCATaGTGCCCCTGCTTTAGGGAT +
Preference number: 5 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMQRLVA*CPCFRD
Trigger: ATCCCTAAAGCAGGGGCACAATGCCACCAGTCTCTG...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp GCCAAAACAATGGATAAAATGCCTCCAGGGCACTTCAGAGACCTTCGTGGCAGCCATTCTTTAGGCTGTTaGGTTTTCTCTGAAGGTACA +
Preference number: 5 (lower is better)
Translates to: AKTMDKMPPGHFRDLRGSHSLGC*VFSEGT
Trigger: TGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATG...GCTGCCACGAAGGTCTCTGAAGTGCCCTGGAGGCATTTTATCCATTGTTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp CAAGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGAGGCCTTTAGCTCCTTaGGGCCAGTTTCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: QDVVASLSSSAMIVNFLRRPLAP*GQFLPL
Trigger: AAGTGGGAGAAACTGGCCCAAAGGAGCTAAAGGCCT...CCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS TCA 90 bp TGGATTATTCTAATTGCACAGCATATATTGAGGTGGGTGTCCAAATaGGTTTTAAAAACCTGGGCTGCTGCCTGCTCCAGTCGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: WIILIAQHILRWVSK*VLKTWAAACSSRLV
Trigger: AACCAGCCGACTGGAGCAGGCAGCAGCCCAGGTTTTTAAAACTCATTTGGACACCCACCTCAATATATGCTGTGCAATTAGAATAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463526.1
CDS GCA 90 bp GTTCATCCAACGAGAAAACAATCTGTGGTTTCTGACTCCTTTGTGTaGCAATGGCTGCCATCCATGTTTGACTTTCAGACACACTGTCTC +
Preference number: 5 (lower is better)
Translates to: VHPTRKQSVVSDSFV*QWLPSMFDFQTHCL
Trigger: GAGACAGTGTGTCTGAAAGTCAAACATGGATGGCAGCCATTGGCACACAAAGGAGTCAGAAACCACAGATTGTTTTCTCGTTGGATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CCA 90 bp CCAACGAGAAAACAATCTGTGGTTTCTGACTCCTTTGTGTGCCAATaGCTGCCATCCATGTTTGACTTTCAGACACACTGTCTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: PTRKQSVVSDSFVCQ*LPSMFDFQTHCLLR
Trigger: TCTCAAGAGACAGTGTGTCTGAAAGTCAAACATGGATGGCAGCCATTGGCACACAAAGGAGTCAGAAACCACAGATTGTTTTCTCGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS-3UTR CAA 90 bp ATCAGGACCGATTTCTTCTCACTGTGGTTCTTCCTAAGTTTTACCCACTTAGGAGTCAAATCATTGGCCTaGAGGAAACAGGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: IRTDFFSLWFFLSFTHLGVKSLA*RKQESG
Trigger: GCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGAC...TCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CAA 90 bp GTGAGACATGGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTTACCTGCCACCCTTTTaGCTGGGACCATGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: VRHGVKDYFGALRFKECPYLPPF*LGPCLR
Trigger: TCTGAGGCATGGTCCCAGCAAAAAGGGTGGCAGGTA...AGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACAGGTACAGCTGAACCATaGCTTCAGAGGGTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTGTAEP*LQRVQA
Trigger: GGCTTGCACCCTCTGAAGCAATGGTTCAGCTGTACC...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp AGATGTGGTTGCATCCCTTTCATCTTCTGCCATGATTGTAAATTTCCTGAGGCCTACATCAGAAGCCAGTaGGTGACAGAAAAACACGGT +
Preference number: 5 (lower is better)
Translates to: RCGCIPFIFCHDCKFPEAYIRSQ*VTEKHG
Trigger: ACCGTGTTTTTCTGTCACCAACTGGCTTCTGATGTA...GGCCTCAGGAAATTTACAATCATGGCAGAAGATGAAAGGGATGCAACCACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGCATTCCCACTTTGAGTaGATAAGATGGGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMHSHFE*IRWGSE
Trigger: CTCTGAGCCCCATCTTATCAACTCAAAGTGGGAATG...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS CCA 90 bp ACTTTACGTTGCTTTAAGCTGTTCATCCAACGAGAAAACAATCTGTaGTTTCTGACTCCTTTGTGTGCCAATGGCTGCCATCCATGTTTG +
Preference number: 5 (lower is better)
Translates to: TLRCFKLFIQRENNL*FLTPLCANGCHPCL
Trigger: CAAACATGGATGGCAGCCATTGGCACACAAAGGAGTCAGAAACCACAGATTGTTTTCTCGTTGGATGAACAGCTTAAAGCAACGTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS-3UTR CAA 90 bp GTGAGACATGGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTGTCAAATCATTGGCCTaGAGGAAACAGGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VRHGVKDYFGALRFKECPVKSLA*RKQESG
Trigger: GCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGAC...AGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACAGTCAAATCATTGGCCTaGAGGAAACAGGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTVKSLA*RKQESG
Trigger: GCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGAC...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421999.8
ENST00000489081.5
ENST00000497345.1
CDS-3UTR CAA 90 bp GTGAGACATGGAGTCAAAGATTATTTTGGAGCTTTAAGATTCAAAGAGTGCCCTGCTCACTGCAGAAGTTaGCACAAGAGGAGCCAAATG +
Preference number: 5 (lower is better)
Translates to: VRHGVKDYFGALRFKECPAHCRS*HKRSQM
Trigger: CATTTGGCTCCTCTTGTGCAAACTTCTGCAGTGAGC...AGGGCACTCTTTGAATCTTAAAGCTCCAAAATAATCTTTGACTCCATGTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp TTTGAACTTGGGAGAGATGACTTAGGGTATCCGGCAGAAATTTCTAAGCAGCAAGGGATCTGTGTAACTTaGAACTTGGGAGAGATGACT +
Preference number: 5 (lower is better)
Translates to: FELGRDDLGYPAEISKQQGICVT*NLGEMT
Trigger: AGTCATCTCTCCCAAGTTCAAAGTTACACAGATCCC...TTGCTGCTTAGAAATTTCTGCCGGATACCCTAAGTCATCTCTCCCAAGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGCAGGTAACCCTGGTTTaGGTTCTGATTTTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMQVTLV*VLILQE
Trigger: TTCTTGCAAAATCAGAACCAAAACCAGGGTTACCTG...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACATGCCACAAGATGTGGTaGCATCCCTTTCATCTTCTG +
Preference number: 5 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTCHKMW*HPFHLL
Trigger: CAGAAGATGAAAGGGATGCAACCACATCTTGTGGCA...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS-3UTR CAA 90 bp AAAATGCTGATAGTGATATGGACAATGAAGTCCAGGCTGAGGTGGTCTCAAATGAAGGGCCAAATTCACTaGATGCTCTTTCTACCACTA +
Preference number: 5 (lower is better)
Translates to: KMLIVIWTMKSRLRWSQMKGQIH*MLFLPL
Trigger: TAGTGGTAGAAAGAGCATCAAGTGAATTTGGCCCTT...CATTTGAGACCACCTCAGCCTGGACTTCATTGTCCATATCACTATCAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS CCA 90 bp CAGGTCATACAGAGTCAACTTTGGTTAACTGTAAAGCGTGGGATTTaGCAGCAAAGACATACTTCAGGACAGATTTTTCAGCAAAATTCA +
Preference number: 5 (lower is better)
Translates to: QVIQSQLWLTVKRGI*QQRHTSGQIFQQNS
Trigger: TGAATTTTGCTGAAAAATCTGTCCTGAAGTATGTCTTTGCTGCCAAATCCCACGCTTTACAGTTAACCAAAGTTGACTCTGTATGACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS-3UTR CAA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACAGGTAACCCTGGTTTaGGTTCTGATTTTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTQVTLV*VLILQE
Trigger: TTCTTGCAAAATCAGAACCAAAACCAGGGTTACCTG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR CAA 90 bp AATAATTTTATAACTTTGCCGTCTCCTCTGAATGCTGTCATCGACCTAATGAGCCAGGTAACCCTGGTTTaGGTTCTGATTTTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: NNFITLPSPLNAVIDLMSQVTLV*VLILQE
Trigger: TTCTTGCAAAATCAGAACCAAAACCAGGGTTACCTG...GCTCATTAGGTCGATGACAGCATTCAGAGGAGACGGCAAAGTTATAAAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CAA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACATTCTTTAGGCTGTTaGGTTTTCTCTGAAGGTACA +
Preference number: 5 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTHSLGC*VFSEGT
Trigger: TGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000489081.5
CDS-3UTR CAA 90 bp AATAATTTTATAACTTTGCCGTCTCCTCTGAATGCTGTCATCGACCTAATGAGCCATTCTTTAGGCTGTTaGGTTTTCTCTGAAGGTACA +
Preference number: 5 (lower is better)
Translates to: NNFITLPSPLNAVIDLMSHSLGC*VFSEGT
Trigger: TGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATG...GCTCATTAGGTCGATGACAGCATTCAGAGGAGACGGCAAAGTTATAAAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491299.5
CDS-3UTR CAA 90 bp TTTCTGTTTCAGAATCCCCACATTCCAGTGATCCATCTGTTGACACAATTAACACCTCCTAGAGACTTGTaGAACAGTTTTGACCAAAAT +
Preference number: 5 (lower is better)
Translates to: FLFQNPHIPVIHLLTQLTPPRDL*NSFDQN
Trigger: ATTTTGGTCAAAACTGTTCAACAAGTCTCTAGGAGG...TGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS GCA 90 bp CACCATCTGATGCTTTACTCTTTCAGTCTTCTGGATTATTCTAATTaGACAGCATATATTGAGGTGGGTGTCCAAATGAGTTTTAAAAAC +
Preference number: 5 (lower is better)
Translates to: HHLMLYSFSLLDYSN*TAYIEVGVQMSFKN
Trigger: GTTTTTAAAACTCATTTGGACACCCACCTCAATATATGCTGTGCAATTAGAATAATCCAGAAGACTGAAAGAGTAAAGCATCAGATGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463526.1
CDS CAA 90 bp GTGGGCAGAACATCACGGGTAGGCGACCAGCTGCGGAGAATCACGTaGTCTCAAAGCCAGGCGGCCGGCGTAGCTACACGCGGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: VGRTSRVGDQLRRIT*SQSQAAGVATRGAP
Trigger: GGGAGCTCCGCGTGTAGCTACGCCGGCCGCCTGGCTTTGAGACAACGTGATTCTCCGCAGCTGGTCGCCTACCCGTGATGTTCTGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000463526.1
CDS CCA 72 bp GGACAGTCTTCTGGGCTGCTGCCTGCTCCAGTCGGCTaGTTCTCCCACCACTCGTCTCCGAGATCGTCTGCC +
Preference number: 6 (lower is better)
Translates to: GQSSGLLPAPVG*FSHHSSPRSSA
Trigger: GGCAGACGATCTCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGAAGACTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CCA 72 bp TCTGATGCTTCTGGGCTGCTGCCTGCTCCAGTCGGCTaGTTCTCCCACCACTCGTCTCCGAGATCGTCTGCC +
Preference number: 6 (lower is better)
Translates to: SDASGLLPAPVG*FSHHSSPRSSA
Trigger: GGCAGACGATCTCGGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGAAGCATCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421999.8
CDS CAA 72 bp ACATCACGGGTAGGCGACCAGCTGCGGAGAATCACGTaGTCTCAAAGCCAGGCGGCCGGCGTAGCTACACGC +
Preference number: 6 (lower is better)
Translates to: TSRVGDQLRRIT*SQSQAAGVATR
Trigger: GCGTGTAGCTACGCCGGCCGCCTGGCTTTGAGACAACGTGATTCTCCGCAGCTGGTCGCCTACCCGTGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421999.8
ENST00000463526.1
CDS GCA 72 bp ATGGGTAGAGATGGGACAGTCTTCTGGGCTGCTGCCTaGTCCAGTCGGCTGGTTCTCCCACCACTCGTCTCC +
Preference number: 6 (lower is better)
Translates to: MGRDGTVFWAAA*SSRLVLPPLVS
Trigger: GGAGACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGAAGACTGTCCCATCTCTACCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CCA 72 bp GAAGTGGAGCCTATGGGTAGAGATGGGACAGTCTTCTaGGCTGCTGCCTGCTCCAGTCGGCTGGTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: EVEPMGRDGTVF*AAACSSRLVLP
Trigger: TGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGAAGACTGTCCCATCTCTACCCATAGGCTCCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS GCA 72 bp GTGGGTGTCCAAATGAGTTTTAAAAACCTGGGCTGCTaGCTGCTCCAGTCGGCTGGTTCTCCCACCACTCGT +
Preference number: 6 (lower is better)
Translates to: VGVQMSFKNLGC*LLQSAGSPTTR
Trigger: ACGAGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGGTTTTTAAAACTCATTTGGACACCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463526.1
CDS GCA 72 bp GAGGTGGGTGTCCAAATGAGTTTTAAAAACCTGGGCTaGTGCCTGCTCCAGTCGGCTGGTTCTCCCACCACT +
Preference number: 6 (lower is better)
Translates to: EVGVQMSFKNLG*CLLQSAGSPTT
Trigger: AGTGGTGGGAGAACCAGCCGACTGGAGCAGGCAGCAGCCCAGGTTTTTAAAACTCATTTGGACACCCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463526.1
CDS GCA 72 bp AGGTTCTATACAGGGACAGAGCATGGCAGTAGCGACTaGCATACTGGGGAGGTAGGTATGCAGAAGCATAGA +
Preference number: 6 (lower is better)
Translates to: RFYTGTEHGSSD*HTGEVGMQKHR
Trigger: TCTATGCTTCTGCATACCTACCTCCCCAGTATGGCAGTCGCTACTGCCATGCTCTGTCCCTGTATAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479555.1
CDS GCA 72 bp CTTCACCATCTGATGCTTCACCATGCATTCCGATGTTaGTCTAGAGTTTCCTCAGCACTTTGCCCTCGTGTC +
Preference number: 6 (lower is better)
Translates to: LHHLMLHHAFRC*SRVSSALCPRV
Trigger: GACACGAGGGCAAAGTGCTGAGGAAACTCTAGAGCAACATCGGAATGCATGGTGAAGCATCAGATGGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489081.5
CDS CCA 72 bp CTCCCAGCACCACCCTCTCAAAATGTCACAACCTCTTaGCATAGGACATCCTGTTCAGCCTGTAATAGTCAT +
Preference number: 6 (lower is better)
Translates to: LPAPPSQNVTTS*HRTSCSACNSH
Trigger: ATGACTATTACAGGCTGAACAGGATGTCCTATGCCAAGAGGTTGTGACATTTTGAGAGGGTGGTGCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS TCA 72 bp CTAATTGCACAGCATATATTGAGGTGGGTGTCCAAATaGGTTTTAAAAACCTGGGCTGCTGCCTGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: LIAQHILRWVSK*VLKTWAAACSS
Trigger: ACTGGAGCAGGCAGCAGCCCAGGTTTTTAAAACTCATTTGGACACCCACCTCAATATATGCTGTGCAATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463526.1
CDS GCA 72 bp AATCTGTGGTTTCTGACTCCTTTGTGTGCCAATGGCTaGCATCCATGTTTGACTTTCAGACACACTGTCTCT +
Preference number: 6 (lower is better)
Translates to: NLWFLTPLCANG*HPCLTFRHTVS
Trigger: AGAGACAGTGTGTCTGAAAGTCAAACATGGATGGCAGCCATTGGCACACAAAGGAGTCAGAAACCACAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CAA 90 bp AAGCTGTTCATCCAACGAGAAAACAATCTGTGGTTTCTGACTCCTTaGTGTGCCAATGGCTGCCATCCATGTTTGACTTTCAGACACACT +
Preference number: 6 (lower is better)
Translates to: KLFIQRENNLWFLTP*CANGCHPCLTFRHT
Trigger: AGTGTGTCTGAAAGTCAAACATGGATGGCAGCCATTGGCACACAAAGGAGTCAGAAACCACAGATTGTTTTCTCGTTGGATGAACAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CAA 90 bp TCACTACTAGTTACTCAGGCTGCTGGGAAAATGTGCAGATGTTTCTaGATGCTACCTAAACTGTTTCTAAAACCACGGTCACATCTGTGT +
Preference number: 6 (lower is better)
Translates to: SLLVTQAAGKMCRCF*MLPKLFLKPRSHLC
Trigger: ACACAGATGTGACCGTGGTTTTAGAAACAGTTTAGGTAGCATCAAGAAACATCTGCACATTTTCCCAGCAGCCTGAGTAACTAGTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CCA 72 bp CAGAGTCAACTTTGGTTAACTGTAAAGCGTGGGATTTaGCAGCAAAGACATACTTCAGGACAGATTTTTCAG +
Preference number: 6 (lower is better)
Translates to: QSQLWLTVKRGI*QQRHTSGQIFQ
Trigger: CTGAAAAATCTGTCCTGAAGTATGTCTTTGCTGCCAAATCCCACGCTTTACAGTTAACCAAAGTTGACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CAA 90 bp ACAGGTCATACAGAGTCAACTTTGGTTAACTGTAAAGCGTGGGATTaGGCAGCAAAGACATACTTCAGGACAGATTTTTCAGCAAAATTC +
Preference number: 6 (lower is better)
Translates to: TGHTESTLVNCKAWD*AAKTYFRTDFSAKF
Trigger: GAATTTTGCTGAAAAATCTGTCCTGAAGTATGTCTTTGCTGCCAAATCCCACGCTTTACAGTTAACCAAAGTTGACTCTGTATGACCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CAA 90 bp ATCCAACTGTCTAAGGAAAATGTAACAGGTCATACAGAGTCAACTTaGGTTAACTGTAAAGCGTGGGATTTGGCAGCAAAGACATACTTC +
Preference number: 6 (lower is better)
Translates to: IQLSKENVTGHTEST*VNCKAWDLAAKTYF
Trigger: GAAGTATGTCTTTGCTGCCAAATCCCACGCTTTACAGTTAACCAAAGTTGACTCTGTATGACCTGTTACATTTTCCTTAGACAGTTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CAA 72 bp ACAGAGTCAACTTTGGTTAACTGTAAAGCGTGGGATTaGGCAGCAAAGACATACTTCAGGACAGATTTTTCA +
Preference number: 6 (lower is better)
Translates to: TESTLVNCKAWD*AAKTYFRTDFS
Trigger: TGAAAAATCTGTCCTGAAGTATGTCTTTGCTGCCAAATCCCACGCTTTACAGTTAACCAAAGTTGACTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496116.1
CDS CAA 72 bp TCTAAGGAAAATGTAACAGGTCATACAGAGTCAACTTaGGTTAACTGTAAAGCGTGGGATTTGGCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: SKENVTGHTEST*VNCKAWDLAAK
Trigger: CTTTGCTGCCAAATCCCACGCTTTACAGTTAACCAAAGTTGACTCTGTATGACCTGTTACATTTTCCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496116.1