Pregenerated sensors for CMPK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000162368Ensembl transcript IDs: ENST00000371873.9, ENST00000471289.2
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCATGCGTAATCTCAGCACTTTaGAAGGTCAAGACGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: NLLKNKLLKTGTTHCGSCVISAL*KVKTRG Trigger: CCCTCTCGTCTTGACCTTCCAAAGTGCTGAGATTAC...GCATGAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| 3UTR-3UTR GCA 90 bp | GATTCCTATCTGACAGATTTCTTCACTTATGTGAGTAGGAATGCTCTCGAAACCAACCACCTCTGTATTTaGTGGCCTGCAACACTAGAT | + |
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Preference number: 2 (lower is better) Translates to: DSYLTDFFTYVSRNALETNHLCI*WPATLD Trigger: ATCTAGTGTTGCAGGCCAGCAAATACAGAGGTGGTT...GGTTTCGAGAGCATTCCTACTCACATAAGTGAAGAAATCTGTCAGATAGGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371873.9 |
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| 3UTR-3UTR CCA 90 bp | GATTCCTATCTGACAGATTTCTTCACTTATGTGAGTAGGAATGCTCTCGAAACCCACCTCTGTATTTGCTaGCCTGCAACACTAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: DSYLTDFFTYVSRNALETHLCIC*PATLDK Trigger: CTTATCTAGTGTTGCAGGCCAGCAAATACAGAGGTG...GGTTTCGAGAGCATTCCTACTCACATAAGTGAAGAAATCTGTCAGATAGGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371873.9 |
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| 3UTR-3UTR TCA 90 bp | GATTCCTATCTGACAGATTTCTTCACTTATGTGAGTAGGAATGCTCTCGAAACCATTATTTGCCCTATTTaGCCCTGTGTACCAAATGAT | + |
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Preference number: 2 (lower is better) Translates to: DSYLTDFFTYVSRNALETIICPI*PCVPND Trigger: ATCATTTGGTACACAGGGTCAAATAGGGCAAATAAT...GGTTTCGAGAGCATTCCTACTCACATAAGTGAAGAAATCTGTCAGATAGGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371873.9 |
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| 3UTR-3UTR TCA 90 bp | GATTCCTATCTGACAGATTTCTTCACTTATGTGAGTAGGAATGCTCTCGAAACCCATACTAGAGCTGTTTaGTTAAACCACCTCTGTATT | + |
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Preference number: 2 (lower is better) Translates to: DSYLTDFFTYVSRNALETHTRAV*LNHLCI Trigger: AATACAGAGGTGGTTTAATCAAACAGCTCTAGTATG...GGTTTCGAGAGCATTCCTACTCACATAAGTGAAGAAATCTGTCAGATAGGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371873.9 |
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| 3UTR-3UTR CAA 90 bp | GAAGAATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCCTCGAGGCCAGGAGTTaGAGATCAGCCTATGCACCA | + |
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Preference number: 3 (lower is better) Translates to: EESLEEQTSKNRDYALWLLEARS*RSAYAP Trigger: TGGTGCATAGGCTGATCTCAAACTCCTGGCCTCGAG...GAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| 3UTR-3UTR CAA 90 bp | GATTCCTATCTGACAGATTTCTTCACTTATGTGAGTAGGAATGCTCTCGAAACCAAACCACCTCTGTATTaGCTGGCCTGCAACACTAGA | + |
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Preference number: 3 (lower is better) Translates to: DSYLTDFFTYVSRNALETKPPLY*LACNTR Trigger: TCTAGTGTTGCAGGCCAGCAAATACAGAGGTGGTTT...GGTTTCGAGAGCATTCCTACTCACATAAGTGAAGAAATCTGTCAGATAGGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371873.9 |
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| 3UTR-3UTR CAA 90 bp | ATAAATTTGGAGAAACACAAAGAACTCAGCAAAGATCACAAGAACCTGAACCTTTGTAATCTCAGCACTTaGGAAGGTCAAGACGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: INLEKHKELSKDHKNLNLCNLST*EGQDER Trigger: CCTCTCGTCTTGACCTTCCAAAGTGCTGAGATTACA...AAGGTTCAGGTTCTTGTGATCTTTGCTGAGTTCTTTGTGTTTCTCCAAATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| 3UTR-3UTR CAA 90 bp | GATTCCTATCTGACAGATTTCTTCACTTATGTGAGTAGGAATGCTCTCGAAACCCAAAGACAAAATTATTaGCCCTATTTGACCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: DSYLTDFFTYVSRNALETQRQNY*PYLTLC Trigger: ACACAGGGTCAAATAGGGCAAATAATTTTGTCTTTG...GGTTTCGAGAGCATTCCTACTCACATAAGTGAAGAAATCTGTCAGATAGGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371873.9 |
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| CDS-3UTR GCA 90 bp | CCTGTAATCTCAGCACTTTGGAAGGTCAAGACGAGAGGGTTGCTCGAGGCCAGGCGTGGAGCAGCCCGCTaGGGCAGCGGCTCAGCATAC | + |
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Preference number: 4 (lower is better) Translates to: PVISALWKVKTRGLLEARRGAAR*GSGSAY Trigger: GTATGCTGAGCCGCTGCCGCAGCGGGCTGCTCCACG...CCTGGCCTCGAGCAACCCTCTCGTCTTGACCTTCCAAAGTGCTGAGATTACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR CCA 90 bp | GAAGAATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCACGATGCGGGCGCACTaGGTCCCCTTGCCGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: EESLEEQTSKNRDYALWLTMRAH*VPLPAP Trigger: CGGCGCCGGCAAGGGGACCCAGTGCGCCCGCATCGT...GAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR CCA 90 bp | GAAGAATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCCTAAGGCCCAGGACGTaGAGCAGCCCGCTGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EESLEEQTSKNRDYALWLLRPRT*SSPLRQ Trigger: CTGCCGCAGCGGGCTGCTCCACGTCCTGGGCCTTAG...GAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR GCA 90 bp | GAAGAATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCGTCATCCCTCGACGATaGGGGCGCACTGGGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: EESLEEQTSKNRDYALWLVIPRR*GRTGSP Trigger: AGGGGACCCAGTGCGCCCGCATCGTCGAGGGATGAC...GAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| 3UTR CAA 72 bp | GTAATCTCAGCACTTTGGAAGGTCAAGACGAGAGGGTaGCTCGAGGCCAGGAGTTTGAGATCAGCCTATGCA | + |
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Preference number: 4 (lower is better) Translates to: VISALWKVKTRG*LEARSLRSAYA Trigger: TGCATAGGCTGATCTCAAACTCCTGGCCTCGAGCAACCCTCTCGTCTTGACCTTCCAAAGTGCTGAGATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR GCA 90 bp | CCTGTAATCTCAGCACTTTGGAAGGTCAAGACGAGAGGGTTGCTCGAGGCCAGGTTTGAGATCAGCCTATaGACCATAGCAAGATGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PVISALWKVKTRGLLEARFEISL*TIARCH Trigger: ATGACATCTTGCTATGGTGCATAGGCTGATCTCAAA...CCTGGCCTCGAGCAACCCTCTCGTCTTGACCTTCCAAAGTGCTGAGATTACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR TCA 90 bp | AATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCATGCTGTCACAACCCAGTGTaGCAGTGGGTAATTTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: NLLKNKLLKTGTTHCGSCCHNPV*QWVICL Trigger: TAAACAAATTACCCACTGTCACACTGGGTTGTGACA...GCATGAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR TCA 90 bp | GAAGAATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCACACACTCAGAACACTaGACTAGAGTGCTTAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: EESLEEQTSKNRDYALWLTHSEH*TRVLKV Trigger: AACCTTAAGCACTCTAGTTCAGTGTTCTGAGTGTGT...GAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR TCA 90 bp | GAAGAATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCAACCTGAACCTTACATaGAATCACACACTCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: EESLEEQTSKNRDYALWLNLNLT*NHTLRT Trigger: TGTTCTGAGTGTGTGATTTCATGTAAGGTTCAGGTT...GAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR TCA 90 bp | AATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCATGCAAGATCACAAGAACCTaGACCTTACATGAAATCACA | + |
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Preference number: 4 (lower is better) Translates to: NLLKNKLLKTGTTHCGSCKITRT*TLHEIT Trigger: TGTGATTTCATGTAAGGTTCAGGTTCTTGTGATCTT...GCATGAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR CCA 90 bp | ATAAATTTGGAGAAACACAAAGAACTCAGCAAAGATCACAAGAACCTGAACCTTGTAATCTCAGCACTTTaGAAGGTCAAGACGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: INLEKHKELSKDHKNLNLVISAL*KVKTRG Trigger: CCCTCTCGTCTTGACCTTCCAAAGTGCTGAGATTAC...AAGGTTCAGGTTCTTGTGATCTTTGCTGAGTTCTTTGTGTTTCTCCAAATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS TCA 90 bp | CACTTTGGAAGGTCAAGACGAGAGGGTTGCTCGAGGCCAGGAGTTTaGGATCAGCCTATGCACCATAGCAAGATGTCATCCCTCGACGAT | + |
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Preference number: 5 (lower is better) Translates to: HFGRSRREGCSRPGV*DQPMHHSKMSSLDD Trigger: ATCGTCGAGGGATGACATCTTGCTATGGTGCATAGGCTGATCTCAAACTCCTGGCCTCGAGCAACCCTCTCGTCTTGACCTTCCAAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR CAA 90 bp | CCTGTAATCTCAGCACTTTGGAAGGTCAAGACGAGAGGGTTGCTCGAGGCCAGGTGTAATCTCAGCACTTaGGAAGGTCAAGACGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PVISALWKVKTRGLLEARCNLST*EGQDER Trigger: CCTCTCGTCTTGACCTTCCAAAGTGCTGAGATTACA...CCTGGCCTCGAGCAACCCTCTCGTCTTGACCTTCCAAAGTGCTGAGATTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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| CDS-3UTR CAA 90 bp | AATCTCTTGAAGAACAAACTTCTAAAAACAGGGACTACGCACTGTGGCTCATGCCTCGAGGCCAGGAGTTaGAGATCAGCCTATGCACCA | + |
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Preference number: 5 (lower is better) Translates to: NLLKNKLLKTGTTHCGSCLEARS*RSAYAP Trigger: TGGTGCATAGGCTGATCTCAAACTCCTGGCCTCGAG...GCATGAGCCACAGTGCGTAGTCCCTGTTTTTAGAAGTTTGTTCTTCAAGAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471289.2 |
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