RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CMKLR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000174600

Ensembl transcript IDs: ENST00000312143.11, ENST00000412676.5, ENST00000549466.1, ENST00000550402.6, ENST00000550573.5, ENST00000552995.5

Found 845 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAAAGCAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTaGTGCTGTGACCCGGGACAGGTCCCATCCCATCTCGTGCCTCAG +
Preference number: 1 (lower is better)
Translates to: EKQHPTSQEGQGADD*CCDPGQVPSHLVPQ
Trigger: CTGAGGCACGAGATGGGATGGGACCTGTCCCGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp AGTCCTGGGCCCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTaGCTGTGCAGCAGTGCAGGTGAGCACACTTTGCACACTGCAGGG +
Preference number: 1 (lower is better)
Translates to: SPGPREKALGTKYVG*LCSSAGEHTLHTAG
Trigger: CCCTGCAGTGTGCAAAGTGTGCTCACCTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGGGCCCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp GGGCCCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTaGAGCAGTGCAGGTGAGCACACTTTGCACACTGCAGGGACGATA +
Preference number: 1 (lower is better)
Translates to: GPREKALGTKYVGCL*SSAGEHTLHTAGTI
Trigger: TATCGTCCCTGCAGTGTGCAAAGTGTGCTCACCTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 90 bp AGCCAATCCCCTCCCTTTGTCAGTGCCCAGTTTCCTCACCCCTTCTaGACCTTGCTGCCAGAATCTCTGTGCCTCTTCTCTGGAGAAGGA +
Preference number: 1 (lower is better)
Translates to: SQSPPFVSAQFPHPF*TLLPESLCLFSGEG
Trigger: TCCTTCTCCAGAGAAGAGGCACAGAGATTCTGGCAGCAAGGTTCAGAAGGGGTGAGGAAACTGGGCACTGACAAAGGGAGGGGATTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 90 bp TGGGGCTATGACACTCTGTGGCCACAGGGACGTGTCAGTATTAGATaGGAAAAGCCATGCCAGGCACCTGTATCCAGGAGGTATTTGGTG +
Preference number: 1 (lower is better)
Translates to: WGYDTLWPQGRVSIR*EKPCQAPVSRRYLV
Trigger: CACCAAATACCTCCTGGATACAGGTGCCTGGCATGGCTTTTCTCATCTAATACTGACACGTCCCTGTGGCCACAGAGTGTCATAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 90 bp TTAAGGCACAATAAGGGAAGGAACAGTTTGTCTCTTAATGAAGTGTaGTTCCAAACAGCCCATGGCCTCGGGAACTCGCCCAGCGCGGGG +
Preference number: 1 (lower is better)
Translates to: LRHNKGRNSLSLNEV*FQTAHGLGNSPSAG
Trigger: CCCCGCGCTGGGCGAGTTCCCGAGGCCATGGGCTGTTTGGAATCACACTTCATTAAGAGACAAACTGTTCCTTCCCTTATTGTGCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 90 bp CTTCTCCCTGTCCTTGCTGGCTCAAGGGTCAGCTGGAGATGGTTCTaGAATCAAATTCCTCCCACTCTTTGGACTTCCATTCCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: LLPVLAGSRVSWRWF*NQIPPTLWTSIPLP
Trigger: GGGGAGAGGAATGGAAGTCCAAAGAGTGGGAGGAATTTGATTTCAGAACCATCTCCAGCTGACCCTTGAGCCAGCAAGGACAGGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp TTTCTTTGCCAAATCTCAAGTCCTCGTTGCATCCCTCACTTGTCTTaGCCTTGCAAAGAGCCCACAGGACCTCTCAGGACCAGTTCTCTG +
Preference number: 1 (lower is better)
Translates to: FLCQISSPRCIPHLS*PCKEPTGPLRTSSL
Trigger: CAGAGAACTGGTCCTGAGAGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATGCAACGAGGACTTGAGATTTGGCAAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp AGAAAAGCCATGCCAGGCACCTGTATCCAGGAGGTATTTGGTGTCTaGAGCTCAGAAACACAGTTCAAGGAGTCCAGCTCCAGACTCTGT +
Preference number: 1 (lower is better)
Translates to: RKAMPGTCIQEVFGV*SSETQFKESSSRLC
Trigger: ACAGAGTCTGGAGCTGGACTCCTTGAACTGTGTTTCTGAGCTGCAGACACCAAATACCTCCTGGATACAGGTGCCTGGCATGGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp CCTCGGGAACTCGCCCAGCGCGGGGTAGACATTGCATCTGTTCATTaGATCTTGTTGGAGAATCAGCTTAACAATGAAGGGACTTGGAAG +
Preference number: 1 (lower is better)
Translates to: PRELAQRGVDIASVH*ILLENQLNNEGTWK
Trigger: CTTCCAAGTCCCTTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTACCCCGCGCTGGGCGAGTTCCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp CATCTGGGCAAGATGAGTTTGAAGGTCCCTTATGGTTTTCACGATTaGATTCTATCTTCTCCCACCCATCCAGGCTCCCAACCCCACCAG +
Preference number: 1 (lower is better)
Translates to: HLGKMSLKVPYGFHD*ILSSPTHPGSQPHQ
Trigger: CTGGTGGGGTTGGGAGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAACTCATCTTGCCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp CATACTCTTCTTCCCAGGGGACTCTCCGGAGTTGCTTCCCAAAGCTaGATTTTGGACCTGTCTCCAAAGGCGTTGAGGAAATTAACCAGA +
Preference number: 1 (lower is better)
Translates to: HTLLPRGLSGVASQS*ILDLSPKALRKLTR
Trigger: TCTGGTTAATTTCCTCAACGCCTTTGGAGACAGGTCCAAAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCCCTGGGAAGAAGAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp CTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGTGAGCACACTTTaGACACTGCAGGGACGATATATGCATGACCCATGGAGATGTTCA +
Preference number: 1 (lower is better)
Translates to: LSMLVACAAVQVSTL*TLQGRYMHDPWRCS
Trigger: TGAACATCTCCATGGGTCATGCATATATCGTCCCTGCAGTGTGCAAAGTGTGCTCACCTGCACTGCTGCACAGGCAACCAACATACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp TTAGATGAGAAAAGCCATGCCAGGCACCTGTATCCAGGAGGTATTTaGTGTCTGCAGCTCAGAAACACAGTTCAAGGAGTCCAGCTCCAG +
Preference number: 1 (lower is better)
Translates to: LDEKSHARHLYPGGI*CLQLRNTVQGVQLQ
Trigger: CTGGAGCTGGACTCCTTGAACTGTGTTTCTGAGCTGCAGACACCAAATACCTCCTGGATACAGGTGCCTGGCATGGCTTTTCTCATCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp GTGAGCACACTTTGCACACTGCAGGGACGATATATGCATGACCCATaGAGATGTTCACATGAAGCTGTGGGGACAAGACTGTATGGGATG +
Preference number: 1 (lower is better)
Translates to: VSTLCTLQGRYMHDP*RCSHEAVGTRLYGM
Trigger: CATCCCATACAGTCTTGTCCCCACAGCTTCATGTGAACATCTCCATGGGTCATGCATATATCGTCCCTGCAGTGTGCAAAGTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 90 bp GTGGGGACAAGACTGTATGGGATGTTAAGGCTGCATTTAAGTACTTaGCAGGAACCTAAGTCAGAACAGGAAGACCCACAGAGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: VGTRLYGMLRLHLST*QEPKSEQEDPQSSQ
Trigger: CTGGCTGCTCTGTGGGTCTTCCTGTTCTGACTTAGGTTCCTGTCAAGTACTTAAATGCAGCCTTAACATCCCATACAGTCTTGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 90 bp CAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTaGAATGGGAGACATCTGGGCAAGATGAGTTTGAAGGTCCCTTAT +
Preference number: 1 (lower is better)
Translates to: QSPQGKLSKPQFPHL*NGRHLGKMSLKVPY
Trigger: ATAAGGGACCTTCAAACTCATCTTGCCCAGATGTCTCCCATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp GCAAGTTACTTTCCCCATCTGGGCCTCAGCTATGTCATTTGTAAATaGGGCTATGACACTCTGTGGCCACAGGGACGTGTCAGTATTAGA +
Preference number: 1 (lower is better)
Translates to: ASYFPHLGLSYVICK*GYDTLWPQGRVSIR
Trigger: TCTAATACTGACACGTCCCTGTGGCCACAGAGTGTCATAGCCCCATTTACAAATGACATAGCTGAGGCCCAGATGGGGAAAGTAACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp GCCAGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTaGGTACCTTTGGGCAAGTTACTTAACCTCTCTAAGCCTCAGATT +
Preference number: 1 (lower is better)
Translates to: ARQTEVQIQAPAETS*VPLGKLLNLSKPQI
Trigger: AATCTGAGGCTTAGAGAGGTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp AGGGCCAATTTGAGGTTTCAGTGTTTGTGCCTGAACCATCGTAGGTaGTTCATGAATGCCAGATCCCTTTCCTTCATCATCATGCTCTGG +
Preference number: 1 (lower is better)
Translates to: RANLRFQCLCLNHRR*FMNARSLSFIIMLW
Trigger: CCAGAGCATGATGATGAAGGAAAGGGATCTGGCATTCATGAAGCACCTACGATGGTTCAGGCACAAACACTGAAACCTCAAATTGGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp GTGAAATGGGAGACATCTGGGCAAGATGAGTTTGAAGGTCCCTTATaGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: VKWETSGQDEFEGPL*FSRLDSIFSHPSRL
Trigger: GAGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAACTCATCTTGCCCAGATGTCTCCCATTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp TCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATaGGAGACATCTGGGCAAGATGAGTTTGAAGGTCCCTTATGGTTT +
Preference number: 1 (lower is better)
Translates to: SSGEALKTSVPSSVK*ETSGQDEFEGPLWF
Trigger: AAACCATAAGGGACCTTCAAACTCATCTTGCCCAGATGTCTCCCATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 90 bp CATTTCTGGGGCACACACAATAGGCAGCTTAATCCCACCGCCCTATaGCAATCCCAGTTCATGGCAATGCTTTTGAGAATTCTTCCTTTT +
Preference number: 1 (lower is better)
Translates to: HFWGTHNRQLNPTAL*QSQFMAMLLRILPF
Trigger: AAAAGGAAGAATTCTCAAAAGCATTGCCATGAACTGGGATTGGCATAGGGCGGTGGGATTAAGCTGCCTATTGTGTGTGCCCCAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 90 bp AAATCTCCAAACTTTTTAAGTCCTTCCCAACTCTGCAGCCTCATTTaGGCCAGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACT +
Preference number: 1 (lower is better)
Translates to: KSPNFLSPSQLCSLI*ARQTEVQIQAPAET
Trigger: AGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCTGGCTCAAATGAGGCTGCAGAGTTGGGAAGGACTTAAAAAGTTTGGAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp GTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAGGGACTTaGAAGAGAACAGAATGTGGACACTTAGGAGCCAAAGGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: VHCILLENQLNNEGT*KRTECGHLGAKGPQ
Trigger: CTGAGGCCCTTTGGCTCCTAAGTGTCCACATTCTGTTCTCTTCCAAGTCCCTTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 90 bp AGAATAATCTCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTaGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGAT +
Preference number: 1 (lower is better)
Translates to: RIISTDKFQIEEQSF*SQTEPGSDLNSATD
Trigger: ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGAGATTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 90 bp CTCCCAGATCACCTATGCATTTCCACATACTTTAACACAGAGCAGTaGCTTGAAGGTAGGGTTTTCTGGCCAGCTACTGATAATATATAT +
Preference number: 1 (lower is better)
Translates to: LPDHLCISTYFNTEQ*LEGRVFWPATDNIY
Trigger: ATATATATTATCAGTAGCTGGCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAAGTATGTGGAAATGCATAGGTGATCTGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGAGGCCCACAAGGGACTaGCTCCTGCCAGCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPRPTRD*LLPAFP
Trigger: AGGGAAAGCTGGCAGGAGGCAGTCCCTTGTGGGCCT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp GGCCCACAAGGGACTGCCTCCTGCCAGCTTTCCCTCCCCATTGCCTaGATCTCTGGAGACATAGGAGGTGGGAGCCACGGTAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GPQGTASCQLSLPIA*ISGDIGGGSHGRRL
Trigger: CAGCCTCCTACCGTGGCTCCCACCTCCTATGTCTCCAGAGATCAAGGCAATGGGGAGGGAAAGCTGGCAGGAGGCAGTCCCTTGTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGGTGAGGGCTGCTGGTaGAGATGCCTGCCACAACCC +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSGEGCW*RCLPQP
Trigger: GGGTTGTGGCAGGCATCTTCACCAGCAGCCCTCACC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGGCATCACACTGGGTTTaGTCTGACCCCCTCACTGCT +
Preference number: 2 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPASHWV*SDPLTA
Trigger: AGCAGTGAGGGGGTCAGAGCAAACCCAGTGTGATGC...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGGTGAGATCAGGGGCTaGCACCACCCTGACGCCCCA +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQGEIRG*HHPDAP
Trigger: TGGGGCGTCAGGGTGGTGCCAGCCCCTGATCTCACC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp CTAAGGCTGGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTaGCTCTTCCCTTCTCCCTGTCCTTGCTGGCTCAAGGGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: LRLAKASRCLRPFVF*LFPSPCPCWLKGQL
Trigger: CAGCTGACCCTTGAGCCAGCAAGGACAGGGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCCAGCCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCACACTGGGTTTGCTCTaGCCCCCTCACTGCTCACAC +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSTLGLL*PPHCSH
Trigger: GTGTGAGCAGTGAGGGGGTCAGAGCAAACCCAGTGT...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCATCCCTGTGATGGGGTaGGGGCTGCTGGTGAAGATG +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSIPVMG*GLLVKM
Trigger: CATCTTCACCAGCAGCCCTCACCCCATCACAGGGAT...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCAAGGGACTGCCTCCTaGCAGCTTTCCCTCCCCATT +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSQGTAS*QLSLPI
Trigger: AATGGGGAGGGAAAGCTGGCAGGAGGCAGTCCCTTG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCATCCTGGCCTGGACTaGCAGAAGCCCAGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSHPGLD*QKPRKS
Trigger: GCTTTTCCTGGGCTTCTGGCAGTCCAGGCCAGGATG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGGGCCTATGGAGTTCATaGGCTGATATGTCACCTTCC +
Preference number: 2 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPGLWSS*ADMSPS
Trigger: GGAAGGTGACATATCAGCCCATGAACTCCATAGGCC...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGCTGGCTCCCCCATCCTaGCCTGGACTGCCAGAAGCC +
Preference number: 2 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGLAPPS*PGLPEA
Trigger: GGCTTCTGGCAGTCCAGGCCAGGATGGGGGAGCCAG...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGGTTGCTTCCCAAAGCTaGATTTTGGACCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPVASQS*ILDLSP
Trigger: TGGAGACAGGTCCAAAATGCAGCTTTGGGAAGCAAC...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGACACTGGGTTTGCTCTaGCCCCCTCACTGCTCACAC +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQTLGLL*PPHCSH
Trigger: GTGTGAGCAGTGAGGGGGTCAGAGCAAACCCAGTGT...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCTTCAGGCAGCTGACCTaGTTCAAAGCCCAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSFRQLT*FKAQLH
Trigger: ATGGAGCTGGGCTTTGAATCAGGTCAGCTGCCTGAA...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCTCTCCTTCCAAGGGCTaGAGAAGTTGGGCATTCAGG +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSSPSKG*RSWAFR
Trigger: CCTGAATGCCCAACTTCTTCAGCCCTTGGAAGGAGA...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCAATCCCACCGCCCTATaGCAATCCCAGTTCATGGCA +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSNPTAL*QSQFMA
Trigger: TGCCATGAACTGGGATTGGCATAGGGCGGTGGGATT...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTGCTGGTGAAGATGCCTaGCACAACCCCACCCCCAGG +
Preference number: 2 (lower is better)
Translates to: TLSQVTESSDILFFPGDSAGEDA*HNPTPR
Trigger: CCTGGGGGTGGGGTTGTGGCAGGCATCTTCACCAGC...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGTATCCAGGAGGTATTTaGTGTCTGCAGCTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPYPGGI*CLQLRN
Trigger: GTTTCTGAGCTGCAGACACCAAATACCTCCTGGATA...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTGGTGAGGGCTGCTGGTaGAGATGCCTGCCACAACCC +
Preference number: 2 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSGEGCW*RCLPQP
Trigger: GGGTTGTGGCAGGCATCTTCACCAGCAGCCCTCACC...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGGGGCATTCAGGCAGCTaGCCTGATTCAAAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGGHSGS*PDSKPS
Trigger: GCTGGGCTTTGAATCAGGTCAGCTGCCTGAATGCCC...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGCTGTTAATGGCTGTTaGGGGAGCTGGAAGCCAAGT +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQAVNGC*GSWKPS
Trigger: ACTTGGCTTCCAGCTCCCTCAACAGCCATTAACAGC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGTTGCTTCCCAAAGCTaGATTTTGGACCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSVASQS*ILDLSP
Trigger: TGGAGACAGGTCCAAAATGCAGCTTTGGGAAGCAAC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGGGATCAATTCAGAGCTaGCTTGTCATAAGCATTAAG +
Preference number: 2 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPGSIQS*LVISIK
Trigger: CTTAATGCTTATGACAAGGCAGCTCTGAATTGATCC...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCACTAAGTATGTTGGTTaGCTGTGCAGCAGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSTKYVG*LCSSAG
Trigger: ACCTGCACTGCTGCACAGGCAACCAACATACTTAGT...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGATGGAGTTCATGGGCTaGTATGTCACCTTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQMEFMG*YVTFLS
Trigger: GGAGAGGAAGGTGACATATCAGCCCATGAACTCCAT...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATTGCGATGTTCTAGGGTaGGCTGCTCCATGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDCDVLG*AAPCLH
Trigger: ATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCA...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGATCCCTGTGATGGGGTaGGGGCTGCTGGTGAAGATG +
Preference number: 2 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLIPVMG*GLLVKM
Trigger: CATCTTCACCAGCAGCCCTCACCCCATCACAGGGAT...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACATCCCTGTGATGGGGTaGGGGCTGCTGGTGAAGATG +
Preference number: 2 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNIPVMG*GLLVKM
Trigger: CATCTTCACCAGCAGCCCTCACCCCATCACAGGGAT...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCTAGCTGTGCAACTCTaGACTAGTGAAGTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSLAVQL*TSEVCS
Trigger: AGAACAGACTTCACTAGTTCAGAGTTGCACAGCTAG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGTGTTCTAGGGTGAGCTaGTCCATGCCTGCATCCTTT +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQCSRVS*SMPASF
Trigger: AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACA...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCATCCTGGCCTGGACTaGCAGAAGCCCAGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMHPGLD*QKPRKS
Trigger: GCTTTTCCTGGGCTTCTGGCAGTCCAGGCCAGGATG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGGCAAAGGCATCCCGGTaGTTGAGGCCCTTCGTGTTC +
Preference number: 2 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMAKASR*LRPFVF
Trigger: GAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGC...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGGGGACAAGACTGTATaGGATGTTAAGGCTGCATTT +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSGDKTV*DVKAAF
Trigger: AAATGCAGCCTTAACATCCCATACAGTCTTGTCCCC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp TTGCCAAATCTCAAGTCCTCGTTGCATCCCTCACTTGTCTTGCCCTaGCAAAGAGCCCACAGGACCTCTCAGGACCAGTTCTCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: LPNLKSSLHPSLVLP*QRAHRTSQDQFSVF
Trigger: GAAGACAGAGAACTGGTCCTGAGAGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATGCAACGAGGACTTGAGATTTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTTTCCTCACCCCTTCTaGACCTTGCTGCCAGAATCT +
Preference number: 2 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGFPHPF*TLLPES
Trigger: AGATTCTGGCAGCAAGGTTCAGAAGGGGTGAGGAAA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGATCTCAAGTCCTCGTTaGATCCCTCACTTGTCTTGC +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQISSPR*IPHLSC
Trigger: GCAAGACAAGTGAGGGATGCAACGAGGACTTGAGAT...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGCACACTTTGCACACTaGAGGGACGATATATGCATG +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQAHFAH*RDDICM
Trigger: CATGCATATATCGTCCCTGCAGTGTGCAAAGTGTGC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTATTCCAAACAGCCCATaGCCTCGGGAACTCGCCCAG +
Preference number: 2 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAIPNSP*PRELAQ
Trigger: CTGGGCGAGTTCCCGAGGCCATGGGCTGTTTGGAAT...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTCCCCCATCCTGGCCTaGACTGCCAGAAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSSPILA*TARSPG
Trigger: TCCTGGGCTTCTGGCAGTCCAGGCCAGGATGGGGGA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTaGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCAT +
Preference number: 2 (lower is better)
Translates to: EESPTTFIQTRHHLV*QSPQGKLSKPQFPH
Trigger: ATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCTGCATTTAAGTACTTaGCAGGAACCTAAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSLHLST*QEPKSE
Trigger: TTCTGACTTAGGTTCCTGTCAAGTACTTAAATGCAG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGTTCAGGCAGCTGACCTaGTTCAAAGCCCAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMFRQLT*FKAQLH
Trigger: ATGGAGCTGGGCTTTGAATCAGGTCAGCTGCCTGAA...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATATCCCTCACTTGTCTTaGCCTTGCAAAGAGCCCACA +
Preference number: 2 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDIPHLS*PCKEPT
Trigger: TGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGAT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCCCACAAGGGACTaGCTCCTGCCAGCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSRPTRD*LLPAFP
Trigger: AGGGAAAGCTGGCAGGAGGCAGTCCCTTGTGGGCCT...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGGATCAATTCAGAGCTaGCTTGTCATAAGCATTAAG +
Preference number: 2 (lower is better)
Translates to: GKGIPVLEALRVLALPFSGSIQS*LVISIK
Trigger: CTTAATGCTTATGACAAGGCAGCTCTGAATTGATCC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp ATTTCTTTGCCAAATCTCAAGTCCTCGTTGCATCCCTCACTTGTCTaGCCCTTGCAAAGAGCCCACAGGACCTCTCAGGACCAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: ISLPNLKSSLHPSLV*PLQRAHRTSQDQFS
Trigger: AGAGAACTGGTCCTGAGAGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATGCAACGAGGACTTGAGATTTGGCAAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp TTCTCATTTCTTTGCCAAATCTCAAGTCCTCGTTGCATCCCTCACTaGTCTTGCCCTTGCAAAGAGCCCACAGGACCTCTCAGGACCAGT +
Preference number: 2 (lower is better)
Translates to: FSFLCQISSPRCIPH*SCPCKEPTGPLRTS
Trigger: ACTGGTCCTGAGAGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATGCAACGAGGACTTGAGATTTGGCAAAGAAATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp ACATCTGGGCAAGATGAGTTTGAAGGTCCCTTATGGTTTTCACGATaGGATTCTATCTTCTCCCACCCATCCAGGCTCCCAACCCCACCA +
Preference number: 2 (lower is better)
Translates to: TSGQDEFEGPLWFSR*DSIFSHPSRLPTPP
Trigger: TGGTGGGGTTGGGAGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAACTCATCTTGCCCAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGCTCTGTCTTCCTAGCTaGTCCGAAAGCCAAATTCAT +
Preference number: 2 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGLCLPS*SESQIH
Trigger: ATGAATTTGGCTTTCGGATCAGCTAGGAAGACAGAG...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTCTCTTAATGAAGTGTaGTTCCAAACAGCCCATGGC +
Preference number: 2 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGSLNEV*FQTAHG
Trigger: GCCATGGGCTGTTTGGAATCACACTTCATTAAGAGA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGGGAAAACAGCCGGTTTaGATTGTGCTCCTGTTTATC +
Preference number: 2 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGGKQPV*IVLLFI
Trigger: GATAAACAGGAGCACAATTCAAACCGGCTGTTTTCC...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACTGTTCTAGGGTGAGCTaGTCCATGCCTGCATCCTTT +
Preference number: 2 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNCSRVS*SMPASF
Trigger: AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACA...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGGACTCTCCGGAGTTaGTTCCCAAAGCTGCATTTT +
Preference number: 2 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLGTLRS*FPKLHF
Trigger: AAAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTGGGACTCTCCGGAGTTaGTTCCCAAAGCTGCATTTT +
Preference number: 2 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSGTLRS*FPKLHF
Trigger: AAAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCC...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCTGCCAGAATCTCTGTaGCTCTTCTCTGGAGAAGGA +
Preference number: 2 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMLPESL*LFSGEG
Trigger: TCCTTCTCCAGAGAAGAGGCACAGAGATTCTGGCAG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCCTTCTGAACCTTGCTaGCAGAATCTCTGTGCCTCT +
Preference number: 2 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMPSEPC*QNLCAS
Trigger: AGAGGCACAGAGATTCTGGCAGCAAGGTTCAGAAGG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACGGCCTATGGAGTTCATaGGCTGATATGTCACCTTCC +
Preference number: 2 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNGLWSS*ADMSPS
Trigger: GGAAGGTGACATATCAGCCCATGAACTCCATAGGCC...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATCGAAAGCCAAATTCATaGCCTATGGAGTTCATGGGC +
Preference number: 2 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDRKPNS*PMEFMG
Trigger: GCCCATGAACTCCATAGGCCATGAATTTGGCTTTCG...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATGCGATGTTCTAGGGTaGGCTGCTCCATGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPCDVLG*AAPCLH
Trigger: ATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGTCTGTCTCAAGTGACTaGGTCCTCGGACATACTCTT +
Preference number: 2 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLSVSSD*VLGHTL
Trigger: AAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGA...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTTTTCCAATGACAACATaGATTCCTGGCTCCCCCATC +
Preference number: 2 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSFPMTT*IPGSPI
Trigger: GATGGGGGAGCCAGGAATTCATGTTGTCATTGGAAA...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGCTCCCAGATCACCTATaGATTTCCACATACTTTAAC +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQLPDHL*ISTYFN
Trigger: GTTAAAGTATGTGGAAATGCATAGGTGATCTGGGAG...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGATCTCAAGTCCTCGTTaGATCCCTCACTTGTCTTGC +
Preference number: 2 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMISSPR*IPHLSC
Trigger: GCAAGACAAGTGAGGGATGCAACGAGGACTTGAGAT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTGCGCGGGGTAGACATTaGATCTGTTCATTGCATCTT +
Preference number: 2 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSARGRH*ICSLHL
Trigger: AAGATGCAATGAACAGATGCAATGTCTACCCCGCGC...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCTGAACCATCGTAGGTaGTTCATGAATGCCAGATCC +
Preference number: 2 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMLNHRR*FMNARS
Trigger: GGATCTGGCATTCATGAAGCACCTACGATGGTTCAG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp CTCGCCCAGCGCGGGGTAGACATTGCATCTGTTCATTGCATCTTGTaGGAGAATCAGCTTAACAATGAAGGGACTTGGAAGAGAACAGAA +
Preference number: 2 (lower is better)
Translates to: LAQRGVDIASVHCIL*ENQLNNEGTWKRTE
Trigger: TTCTGTTCTCTTCCAAGTCCCTTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTACCCCGCGCTGGGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp GAACTCGCCCAGCGCGGGGTAGACATTGCATCTGTTCATTGCATCTaGTTGGAGAATCAGCTTAACAATGAAGGGACTTGGAAGAGAACA +
Preference number: 2 (lower is better)
Translates to: ELAQRGVDIASVHCI*LENQLNNEGTWKRT
Trigger: TGTTCTCTTCCAAGTCCCTTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTACCCCGCGCTGGGCGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTTTGAGCCAGGCAAACTaGAGTTCAAATCCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQALSQAN*SSNPSS
Trigger: GGAGCTTGGATTTGAACTTCAGTTTGCCTGGCTCAA...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGTCTCTTAATGAAGTGTaGTTCCAAACAGCCCATGGC +
Preference number: 2 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMSLNEV*FQTAHG
Trigger: GCCATGGGCTGTTTGGAATCACACTTCATTAAGAGA...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCGGAGATGGGGGCCACTaGGCAATATTTAAAGCTCCC +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSGDGGH*AIFKAP
Trigger: GGGAGCTTTAAATATTGCTCAGTGGCCCCCATCTCC...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTATGGAGATGTTCACATaGAGCTGTGGGGACAAGACT +
Preference number: 2 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAMEMFT*SCGDKT
Trigger: AGTCTTGTCCCCACAGCTTCATGTGAACATCTCCAT...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTGGGACGATATATGCATaGCCCATGGAGATGTTCACA +
Preference number: 2 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAGTIYA*PMEMFT
Trigger: TGTGAACATCTCCATGGGTCATGCATATATCGTCCC...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCCACTTGTCTTGCCCTTaGAAAGAGCCCACAGGACCT +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSHLSCP*KEPTGP
Trigger: AGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTG...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTTTTCCTTCATCATCATaGTCTGGGACCTTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSFPSSS*SGTFLS
Trigger: GGACAGAAAGGTCCCAGAGCATGATGATGAAGGAAA...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTGCAGTGAAAATTGGTaGATGCTAAAGAGGTTCTTG +
Preference number: 2 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPCSENW*MLKRFL
Trigger: CAAGAACCTCTTTAGCATCCACCAATTTTCACTGCA...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
3UTR-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGTTACTTTCCCCATCTaGGCCTCAGCTATGTCATTT +
Preference number: 2 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLVTFPI*ASAMSF
Trigger: AAATGACATAGCTGAGGCCCAGATGGGGAAAGTAAC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGAACAATGAAGGGACTTaGAAGAGAACAGAATGTGGA +
Preference number: 2 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGNNEGT*KRTECG
Trigger: TCCACATTCTGTTCTCTTCCAAGTCCCTTCATTGTT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTGGGAAGAGGGGAGATaGGGGCCACTGAGCAATATT +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSWEEGR*GPLSNI
Trigger: AATATTGCTCAGTGGCCCCCATCTCCCCTCTTCCCA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACAAGAGGTTCTTGCCTTaGTCTTCAGAAGACATATCC +
Preference number: 2 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHKRFLP*SSEDIS
Trigger: GGATATGTCTTCTGAAGATCAAGGCAAGAACCTCTT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
3UTR-3UTR TCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTTTTAACACAGAGCAGTaGCTTGAAGGTAGGGTTTTC +
Preference number: 2 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSFNTEQ*LEGRVF
Trigger: GAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAA...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTCTAGCTGTGCAACTCTaGACTAGTGAAGTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQALAVQL*TSEVCS
Trigger: AGAACAGACTTCACTAGTTCAGAGTTGCACAGCTAG...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATGAAGGTAGGGTTTTCTaGCCAGCTACTGATAATATA +
Preference number: 2 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDEGRVF*PATDNI
Trigger: TATATTATCAGTAGCTGGCCAGAAAACCCTACCTTC...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTGAAGAGAACAGAATGTaGACACTTAGGAGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAEENRM*TLRSQR
Trigger: CCTTTGGCTCCTAAGTGTCCACATTCTGTTCTCTTC...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGTTCATTGCATCTTGTTaGAGAATCAGCTTAACAATG +
Preference number: 2 (lower is better)
Translates to: PERRLWALSMLVACAAVQFIASC*RISLTM
Trigger: CATTGTTAAGCTGATTCTCCAACAAGATGCAATGAA...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp AAGGGTCAGCTGGAGATGGTTCTGAAATCAAATTCCTCCCACTCTTaGGACTTCCATTCCTCTCCCCTTCTCTCTTCTTTCTTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: KGQLEMVLKSNSSHS*DFHSSPLLSSFFLP
Trigger: AGGAAGAAAGAAAGAAGAGAGAAGGGGAGAGGAATGGAAGTCCAAAGAGTGGGAGGAATTTGATTTCAGAACCATCTCCAGCTGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCGTTGCTTCCCAAAGCTaGATTTTGGACCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSVASQS*ILDLSP
Trigger: TGGAGACAGGTCCAAAATGCAGCTTTGGGAAGCAAC...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCCTGAACCATCGTAGGTaGTTCATGAATGCCAGATCC +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSLNHRR*FMNARS
Trigger: GGATCTGGCATTCATGAAGCACCTACGATGGTTCAG...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGAAGGTAGGGTTTTCTaGCCAGCTACTGATAATATA +
Preference number: 2 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLEGRVF*PATDNI
Trigger: TATATTATCAGTAGCTGGCCAGAAAACCCTACCTTC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCCGAAAGCCAAATTCATaGCCTATGGAGTTCATGGGC +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSRKPNS*PMEFMG
Trigger: GCCCATGAACTCCATAGGCCATGAATTTGGCTTTCG...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTTCATCATCATGCTCTaGGACCTTTCTGTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSFIIML*DLSVPS
Trigger: AGAGGGGACAGAAAGGTCCCAGAGCATGATGATGAA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCTCATCCCATGCAAAATaGAGTGAAAATTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFSSHAK*SENWWM
Trigger: CATCCACCAATTTTCACTGCATTTTGCATGGGATGA...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
3UTR-3UTR CCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACAAATGCAGTGAAAATTaGTGGATGCTAAAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNKCSEN*WMLKRF
Trigger: GAACCTCTTTAGCATCCACCAATTTTCACTGCATTT...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAAGAGGTTCTTGCCTTaGTCTTCAGAAGACATATCC +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSKRFLP*SSEDIS
Trigger: GGATATGTCTTCTGAAGATCAAGGCAAGAACCTCTT...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTTTAACACAGAGCAGTaGCTTGAAGGTAGGGTTTTC +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSFNTEQ*LEGRVF
Trigger: GAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACACTTGTCTTGCCCTTaGAAAGAGCCCACAGGACCT +
Preference number: 2 (lower is better)
Translates to: VDIASVHCILLENQLNNEHLSCP*KEPTGP
Trigger: AGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTAAATGCAGTGAAAATTaGTGGATGCTAAAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAKCSEN*WMLKRF
Trigger: GAACCTCTTTAGCATCCACCAATTTTCACTGCATTT...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAATGGAGTTCATGGGCTaGTATGTCACCTTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: VDIASVHCILLENQLNNEMEFMG*YVTFLS
Trigger: GGAGAGGAAGGTGACATATCAGCCCATGAACTCCAT...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTCATCCCATGCAAAATaGAGTGAAAATTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSSSHAK*SENWWM
Trigger: CATCCACCAATTTTCACTGCATTTTGCATGGGATGA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATGCAGTGAAAATTGGTaGATGCTAAAGAGGTTCTTG +
Preference number: 2 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPCSENW*MLKRFL
Trigger: CAAGAACCTCTTTAGCATCCACCAATTTTCACTGCA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTGCAGTGAAAATTGGTaGATGCTAAAGAGGTTCTTG +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSCSENW*MLKRFL
Trigger: CAAGAACCTCTTTAGCATCCACCAATTTTCACTGCA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATATGTCATTTGTAAATaGGGCTATGACACTCTGTGG +
Preference number: 2 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPYVICK*GYDTLW
Trigger: CCACAGAGTGTCATAGCCCCATTTACAAATGACATA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAACAATGAAGGGACTTaGAAGAGAACAGAATGTGGA +
Preference number: 2 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSNNEGT*KRTECG
Trigger: TCCACATTCTGTTCTCTTCCAAGTCCCTTCATTGTT...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTTTCATTGCATCTTGTTaGAGAATCAGCTTAACAATG +
Preference number: 2 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAFIASC*RISLTM
Trigger: CATTGTTAAGCTGATTCTCCAACAAGATGCAATGAA...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp AAACCGTCTATATTCAAACTCTTTAAAGCATTCAGAGGCTCCAGCTaGGGATCAATTCAGAGCTGCCTTGTCATAAGCATTAAGGCACAA +
Preference number: 2 (lower is better)
Translates to: KPSIFKLFKAFRGSS*GSIQSCLVISIKAQ
Trigger: TTGTGCCTTAATGCTTATGACAAGGCAGCTCTGAATTGATCCCAAGCTGGAGCCTCTGAATGCTTTAAAGAGTTTGAATATAGACGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 90 bp CAGATCACCTATGCATTTCCACATACTTTAACACAGAGCAGTGACTaGAAGGTAGGGTTTTCTGGCCAGCTACTGATAATATATATACAA +
Preference number: 2 (lower is better)
Translates to: QITYAFPHTLTQSSD*KVGFSGQLLIIYIQ
Trigger: TTGTATATATATTATCAGTAGCTGGCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAAGTATGTGGAAATGCATAGGTGATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR TCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACCATGCAAAATGCAGTaGAAATTGGTGGATGCTAAA +
Preference number: 2 (lower is better)
Translates to: VDIASVHCILLENQLNNEPCKMQ*KLVDAK
Trigger: TTTAGCATCCACCAATTTTCACTGCATTTTGCATGG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp CATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTaGTGCTGTGACCCGGGACAGGTCCCATCCCATCTC +
Preference number: 3 (lower is better)
Translates to: HPTSQEGQGADD*CCDPGQVPSHL
Trigger: GAGATGGGATGGGACCTGTCCCGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGTTGGGTGTCCCTGGGTaGAGAGAGTCCATTGAGGGG +
Preference number: 3 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPLGVPG*RESIEG
Trigger: CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAA...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGACACAGAGCAGTGACTaGAAGGTAGGGTTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPTQSSD*KVGFSG
Trigger: GCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCTCACTTGTCTTGCCCTaGCAAAGAGCCCACAGGACC +
Preference number: 3 (lower is better)
Translates to: GKGIPVLEALRVLALPFSSLVLP*QRAHRT
Trigger: GGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGA...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCTTCAGAGGCTCCAGCTaGGGATCAATTCAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: GKGIPVLEALRVLALPFSFRGSS*GSIQSC
Trigger: GCAGCTCTGAATTGATCCCAAGCTGGAGCCTCTGAA...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGGGGACTCTCCGGAGTaGCTTCCCAAAGCTGCATTT +
Preference number: 3 (lower is better)
Translates to: PERRLWALSMLVACAAVQGDSPE*LPKAAF
Trigger: AAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCCC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp CCCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTaGCTGTGCAGCAGTGCAGGTGAGCACACTTTGCAC +
Preference number: 3 (lower is better)
Translates to: PREKALGTKYVG*LCSSAGEHTLH
Trigger: GTGCAAAGTGTGCTCACCTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTCACCAGGAATGGACCTaGGAGAGTGTCATTTCTGGG +
Preference number: 3 (lower is better)
Translates to: STISLRCSRVSCSMPASFHQEWT*ESVISG
Trigger: CCCAGAAATGACACTCTCCAAGGTCCATTCCTGGTG...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTCACTTGTCTTGCCCTaGCAAAGAGCCCACAGGACC +
Preference number: 3 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGSLVLP*QRAHRT
Trigger: GGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 72 bp GACACTCTGTGGCCACAGGGACGTGTCAGTATTAGATaGGAAAAGCCATGCCAGGCACCTGTATCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: DTLWPQGRVSIR*EKPCQAPVSRR
Trigger: CCTCCTGGATACAGGTGCCTGGCATGGCTTTTCTCATCTAATACTGACACGTCCCTGTGGCCACAGAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp CTTCCCAGGGGACTCTCCGGAGTTGCTTCCCAAAGCTaGATTTTGGACCTGTCTCCAAAGGCGTTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: LPRGLSGVASQS*ILDLSPKALRK
Trigger: TTTCCTCAACGCCTTTGGAGACAGGTCCAAAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCCCTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp ATGGCCTCGGGAACTCGCCCAGCGCGGGGTAGACATTaGATCTGTTCATTGCATCTTGTTGGAGAATCAGCT +
Preference number: 3 (lower is better)
Translates to: MASGTRPARGRH*ICSLHLVGESA
Trigger: AGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTACCCCGCGCTGGGCGAGTTCCCGAGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp TTGGTTGCCTGTGCAGCAGTGCAGGTGAGCACACTTTaGACACTGCAGGGACGATATATGCATGACCCATGG +
Preference number: 3 (lower is better)
Translates to: LVACAAVQVSTL*TLQGRYMHDPW
Trigger: CCATGGGTCATGCATATATCGTCCCTGCAGTGTGCAAAGTGTGCTCACCTGCACTGCTGCACAGGCAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp GAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTaGAGCAGTGCAGGTGAGCACACTTTGCACACTGCA +
Preference number: 3 (lower is better)
Translates to: EKALGTKYVGCL*SSAGEHTLHTA
Trigger: TGCAGTGTGCAAAGTGTGCTCACCTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTCATCCCTCACTTGTCTaGCCCTTGCAAAGAGCCCAC +
Preference number: 3 (lower is better)
Translates to: TLSQVTESSDILFFPGDSHPSLV*PLQRAH
Trigger: GTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATG...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGTTTAAAGCTCCCTTTTaGCTCTCAAACCGTCTATAT +
Preference number: 3 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPFKAPF*LSNRLY
Trigger: ATATAGACGGTTTGAGAGCAAAAAGGGAGCTTTAAA...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGACTCTGGGGTCGAATTaGAGCCAATCCCCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGTLGSN*SQSPPF
Trigger: AAAGGGAGGGGATTGGCTCAAATTCGACCCCAGAGT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp TCTGGGAATTATCTAAGGCTGGCAAAGGCATCCCGGTaGTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: SGNYLRLAKASR*LRPFVFLLFPS
Trigger: AGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCCAGCCTTAGATAATTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 72 bp TTTCCCCATCTGGGCCTCAGCTATGTCATTTGTAAATaGGGCTATGACACTCTGTGGCCACAGGGACGTGTC +
Preference number: 3 (lower is better)
Translates to: FPHLGLSYVICK*GYDTLWPQGRV
Trigger: GACACGTCCCTGTGGCCACAGAGTGTCATAGCCCCATTTACAAATGACATAGCTGAGGCCCAGATGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTTTGGGTGTCCCTGGGTaGAGAGAGTCCATTGAGGGG +
Preference number: 3 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQALGVPG*RESIEG
Trigger: CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAA...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTCAGAAGACATATCCTaGGGTGTCCCTGGGTTGAGA +
Preference number: 3 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGSEDIS*GVPGLR
Trigger: TCTCAACCCAGGGACACCCAAGGATATGTCTTCTGA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGGGGGACTCTCCGGAGTaGCTTCCCAAAGCTGCATTT +
Preference number: 3 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMGDSPE*LPKAAF
Trigger: AAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCCC...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCAAGGGCTGAAGAAGTaGGGCATTCAGGCAGCTGAC +
Preference number: 3 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSQGLKK*GIQAAD
Trigger: GTCAGCTGCCTGAATGCCCAACTTCTTCAGCCCTTG...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGTTGGGTGTCCCTGGGTaGAGAGAGTCCATTGAGGGG +
Preference number: 3 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQLGVPG*RESIEG
Trigger: CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAA...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
3UTR-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTTCAGAAGACATATCCTaGGGTGTCCCTGGGTTGAGA +
Preference number: 3 (lower is better)
Translates to: TLSQVTESSDILFFPGDSSEDIS*GVPGLR
Trigger: TCTCAACCCAGGGACACCCAAGGATATGTCTTCTGA...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCACCAGGAATGGACCTaGGAGAGTGTCATTTCTGGG +
Preference number: 3 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNHQEWT*ESVISG
Trigger: CCCAGAAATGACACTCTCCAAGGTCCATTCCTGGTG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 72 bp CAGCCTAAAGCACCATCAGCCTGCGATGTTCTAGGGTaGGCTGCTCCATGCCTGCATCCTTTAAAGGTTCTT +
Preference number: 3 (lower is better)
Translates to: QPKAPSACDVLG*AAPCLHPLKVL
Trigger: AAGAACCTTTAAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCTTTAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATAATCTCAAGTCCTCGTaGCATCCCTCACTTGTCTTG +
Preference number: 3 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDNLKSS*HPSLVL
Trigger: CAAGACAAGTGAGGGATGCAACGAGGACTTGAGATT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTTCCTTTCTCATTTCTTaGCCAAATCTCAAGTCCTCG +
Preference number: 3 (lower is better)
Translates to: STISLRCSRVSCSMPASFSFLIS*PNLKSS
Trigger: CGAGGACTTGAGATTTGGCAAAGAAATGAGAAAGGA...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTTCTGCCAGGGCCAATTaGAGGTTTCAGTGTTTGTGC +
Preference number: 3 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSSARAN*RFQCLC
Trigger: GCACAAACACTGAAACCTCAAATTGGCCCTGGCAGA...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp CCTTCTGCCAGGGCCAATTTGAGGTTTCAGTGTTTGTaGCTGAACCATCGTAGGTGCTTCATGAATGCCAGA +
Preference number: 3 (lower is better)
Translates to: PSARANLRFQCL*LNHRRCFMNAR
Trigger: TCTGGCATTCATGAAGCACCTACGATGGTTCAGGCACAAACACTGAAACCTCAAATTGGCCCTGGCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 72 bp AAAAGCCATGCCAGGCACCTGTATCCAGGAGGTATTTaGTGTCTGCAGCTCAGAAACACAGTTCAAGGAGTC +
Preference number: 3 (lower is better)
Translates to: KSHARHLYPGGI*CLQLRNTVQGV
Trigger: GACTCCTTGAACTGTGTTTCTGAGCTGCAGACACCAAATACCTCCTGGATACAGGTGCCTGGCATGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 72 bp CTTTGCACACTGCAGGGACGATATATGCATGACCCATaGAGATGTTCACATGAAGCTGTGGGGACAAGACTG +
Preference number: 3 (lower is better)
Translates to: LCTLQGRYMHDP*RCSHEAVGTRL
Trigger: CAGTCTTGTCCCCACAGCTTCATGTGAACATCTCCATGGGTCATGCATATATCGTCCCTGCAGTGTGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTACACAGAGCAGTGACTaGAAGGTAGGGTTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQATQSSD*KVGFSG
Trigger: GCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGT...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 72 bp AATAAGGGAAGGAACAGTTTGTCTCTTAATGAAGTGTaGTTCCAAACAGCCCATGGCCTCGGGAACTCGCCC +
Preference number: 3 (lower is better)
Translates to: NKGRNSLSLNEV*FQTAHGLGNSP
Trigger: GGGCGAGTTCCCGAGGCCATGGGCTGTTTGGAATCACACTTCATTAAGAGACAAACTGTTCCTTCCCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR GCA 72 bp GGCACACACAATAGGCAGCTTAATCCCACCGCCCTATaGCAATCCCAGTTCATGGCAATGCTTTTGAGAATT +
Preference number: 3 (lower is better)
Translates to: GTHNRQLNPTAL*QSQFMAMLLRI
Trigger: AATTCTCAAAAGCATTGCCATGAACTGGGATTGGCATAGGGCGGTGGGATTAAGCTGCCTATTGTGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 72 bp GAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATaGGAGACATCTGGGCAAGATGAGTTTGAAGGTCCC +
Preference number: 3 (lower is better)
Translates to: EALKTSVPSSVK*ETSGQDEFEGP
Trigger: GGGACCTTCAAACTCATCTTGCCCAGATGTCTCCCATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGAAAGAGGTTCTTGCCTaGATCTTCAGAAGACATATC +
Preference number: 3 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGKEVLA*IFRRHI
Trigger: GATATGTCTTCTGAAGATCAAGGCAAGAACCTCTTT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTCCCAAAGCTGCATTTaGGACCTGTCTCCAAAGGCG +
Preference number: 3 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSSQSCI*DLSPKA
Trigger: CGCCTTTGGAGACAGGTCCAAAATGCAGCTTTGGGA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTCTGTTCATTGCATCTaGTTGGAGAATCAGCTTAAC +
Preference number: 3 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGSVHCI*LENQLN
Trigger: GTTAAGCTGATTCTCCAACAAGATGCAATGAACAGA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGAACAGCCGGTTTGAATaGTGCTCCTGTTTATCAGCT +
Preference number: 3 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMNSRFE*CSCLSA
Trigger: AGCTGATAAACAGGAGCACAATTCAAACCGGCTGTT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATAAAGAGGTTCTTGCCTaGATCTTCAGAAGACATATC +
Preference number: 3 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDKEVLA*IFRRHI
Trigger: GATATGTCTTCTGAAGATCAAGGCAAGAACCTCTTT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTAAAGAGGTTCTTGCCTaGATCTTCAGAAGACATATC +
Preference number: 3 (lower is better)
Translates to: TLSQVTESSDILFFPGDSKEVLA*IFRRHI
Trigger: GATATGTCTTCTGAAGATCAAGGCAAGAACCTCTTT...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTCTGTCTCCAAAGGCGTaGAGGAAATTAACCAGAATG +
Preference number: 3 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQALSPKA*RKLTRM
Trigger: CATTCTGGTTAATTTCCTCAACGCCTTTGGAGACAG...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 72 bp ACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTaGGTACCTTTGGGCAAGTTACTTAACCTCTCTAAG +
Preference number: 3 (lower is better)
Translates to: TEVQIQAPAETS*VPLGKLLNLSK
Trigger: CTTAGAGAGGTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACAAAGAGGTTCTTGCCTaGATCTTCAGAAGACATATC +
Preference number: 3 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHKEVLA*IFRRHI
Trigger: GATATGTCTTCTGAAGATCAAGGCAAGAACCTCTTT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
3UTR-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAAATCTCAAGTCCTCGTaGCATCCCTCACTTGTCTTG +
Preference number: 3 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPNLKSS*HPSLVL
Trigger: CAAGACAAGTGAGGGATGCAACGAGGACTTGAGATT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 72 bp AACTTTTTAAGTCCTTCCCAACTCTGCAGCCTCATTTaGGCCAGGCAAACTGAAGTTCAAATCCAAGCTCCG +
Preference number: 3 (lower is better)
Translates to: NFLSPSQLCSLI*ARQTEVQIQAP
Trigger: CGGAGCTTGGATTTGAACTTCAGTTTGCCTGGCTCAAATGAGGCTGCAGAGTTGGGAAGGACTTAAAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 72 bp GAGACATCTGGGCAAGATGAGTTTGAAGGTCCCTTATaGTTTTCACGATTGGATTCTATCTTCTCCCACCCA +
Preference number: 3 (lower is better)
Translates to: ETSGQDEFEGPL*FSRLDSIFSHP
Trigger: TGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAACTCATCTTGCCCAGATGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 72 bp CACCTATGCATTTCCACATACTTTAACACAGAGCAGTaGCTTGAAGGTAGGGTTTTCTGGCCAGCTACTGAT +
Preference number: 3 (lower is better)
Translates to: HLCISTYFNTEQ*LEGRVFWPATD
Trigger: ATCAGTAGCTGGCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAAGTATGTGGAAATGCATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR TCA 72 bp AGACTGTATGGGATGTTAAGGCTGCATTTAAGTACTTaGCAGGAACCTAAGTCAGAACAGGAAGACCCACAG +
Preference number: 3 (lower is better)
Translates to: RLYGMLRLHLST*QEPKSEQEDPQ
Trigger: CTGTGGGTCTTCCTGTTCTGACTTAGGTTCCTGTCAAGTACTTAAATGCAGCCTTAACATCCCATACAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTCCTTTCTCATTTCTTaGCCAAATCTCAAGTCCTCG +
Preference number: 3 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSSFLIS*PNLKSS
Trigger: CGAGGACTTGAGATTTGGCAAAGAAATGAGAAAGGA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CCA 72 bp ATCTTGTTGGAGAATCAGCTTAACAATGAAGGGACTTaGAAGAGAACAGAATGTGGACACTTAGGAGCCAAA +
Preference number: 3 (lower is better)
Translates to: ILLENQLNNEGT*KRTECGHLGAK
Trigger: TTTGGCTCCTAAGTGTCCACATTCTGTTCTCTTCCAAGTCCCTTCATTGTTAAGCTGATTCTCCAACAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACTGTCTCCAAAGGCGTaGAGGAAATTAACCAGAATG +
Preference number: 3 (lower is better)
Translates to: VDIASVHCILLENQLNNELSPKA*RKLTRM
Trigger: CATTCTGGTTAATTTCCTCAACGCCTTTGGAGACAG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGAGGCGAACGCTGCGGTaGTTCTGGGACCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPRRTLR*FWDQTG
Trigger: CCCTGTCTGGTCCCAGAACCACCGCAGCGTTCGCCT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGAGGCATCCCGGTGCTTaGGGCCCTTCGTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPRHPGA*GPSCSC
Trigger: GCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGCTGCCACTGCCAGGTTaGGGAACCAGACCATGTTCA +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPLPLPG*GTRPCS
Trigger: TGAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAG...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGGGGCAAACCCAGGCTaGAGACAGAGCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSGANPG*RQSQAW
Trigger: CCATGCCTGGCTCTGTCTTCAGCCTGGGTTTGCCCC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGCTGGTGAAGATGCCTaGCACAACCCCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSAGEDA*HNPTPR
Trigger: CCTGGGGGTGGGGTTGTGGCAGGCATCTTCACCAGC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGGGCATGGCAGTGTGGTaGAGCTCTAGGAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPGMAVW*SSRRLS
Trigger: ACTCAACCTCCTAGAGCTCCACCACACTGCCATGCC...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGTTCAGGCAGCTGACCTaGTTCAAAGCCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPFRQLT*FKAQLH
Trigger: ATGGAGCTGGGCTTTGAATCAGGTCAGCTGCCTGAA...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGCCAGGCGGTTGCGCTaGAGTTTGCACACGATGGTG +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSARRLR*SLHTMV
Trigger: CACCATCGTGTGCAAACTGCAGCGCAACCGCCTGGC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGACCCCTTCTGAACCTTaGTGCCAGAATCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPTPSEP*CQNLCA
Trigger: GGCACAGAGATTCTGGCAGCAAGGTTCAGAAGGGGT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTTTCAAGATCCCCCTCTaGACCCCCAGAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFFKIPL*TPRAPQ
Trigger: CTGCGGCGCTCTGGGGGTTCAGAGGGGGATCTTGAA...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCGGTGAGATCAGGGGCTaGCACCACCCTGACGCCCCA +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPGEIRG*HHPDAP
Trigger: TGGGGCGTCAGGGTGGTGCCAGCCCCTGATCTCACC...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGATTCCTCCCACTCTTTaGACTTCCATTCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPIPPTL*TSIPLP
Trigger: GGGGAGAGGAATGGAAGTCCAAAGAGTGGGAGGAAT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTTCAAGATCCCCCTCTaGACCCCCAGAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHFKIPL*TPRAPQ
Trigger: CTGCGGCGCTCTGGGGGTTCAGAGGGGGATCTTGAA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGGGTCCATTTGGGAGTaGGTGGGCCACGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQGSIWE*VGHEED
Trigger: GTCTTCCTCGTGGCCCACTCACTCCCAAATGGACCC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGGGGGCAAACCCAGGCTaGAGACAGAGCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGGANPG*RQSQAW
Trigger: CCATGCCTGGCTCTGTCTTCAGCCTGGGTTTGCCCC...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGTTTCCAATGACAACATaGATTCCTGGCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPFPMTT*IPGSPI
Trigger: GATGGGGGAGCCAGGAATTCATGTTGTCATTGGAAA...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGGGGACGATATATGCATaGCCCATGGAGATGTTCACA +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPGTIYA*PMEMFT
Trigger: TGTGAACATCTCCATGGGTCATGCATATATCGTCCC...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGGCTGGTGAAGATGCCTaGCACAACCCCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGAGEDA*HNPTPR
Trigger: CCTGGGGGTGGGGTTGTGGCAGGCATCTTCACCAGC...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGGGTGAGATCAGGGGCTaGCACCACCCTGACGCCCCA +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQGEIRG*HHPDAP
Trigger: TGGGGCGTCAGGGTGGTGCCAGCCCCTGATCTCACC...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTCCCCCATCCTGGCCTaGACTGCCAGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHSPILA*TARSPG
Trigger: TCCTGGGCTTCTGGCAGTCCAGGCCAGGATGGGGGA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGCTGGCTCCCCCATCCTaGCCTGGACTGCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGLAPPS*PGLPEA
Trigger: GGCTTCTGGCAGTCCAGGCCAGGATGGGGGAGCCAG...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCAAGATCCCCCTCTaGACCCCCAGAGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGFKIPL*TPRAPQ
Trigger: CTGCGGCGCTCTGGGGGTTCAGAGGGGGATCTTGAA...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCGGGTCCATTTGGGAGTaGGTGGGCCACGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPGSIWE*VGHEED
Trigger: GTCTTCCTCGTGGCCCACTCACTCCCAAATGGACCC...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCCACAGAGGAAGCGGGTaGCAGTCACCACCATGTGCC +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPHRGSG*QSPPCA
Trigger: GGCACATGGTGGTGACTGTCACCCGCTTCCTCTGTG...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACGGAGCTCTAGGAGGTTaGGTGTGTGGTAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHGALGG*VCGRGT
Trigger: GGTGCCCCTACCACACACTCAACCTCCTAGAGCTCC...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGGGAGCTCTAGGAGGTTaGGTGTGTGGTAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGGALGG*VCGRGT
Trigger: GGTGCCCCTACCACACACTCAACCTCCTAGAGCTCC...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTGGGGCAAACCCAGGCTaGAGACAGAGCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: TLSQVTESSDILFFPGDSGANPG*RQSQAW
Trigger: CCATGCCTGGCTCTGTCTTCAGCCTGGGTTTGCCCC...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATGGTGAGGGCTGCTGGTaGAGATGCCTGCCACAACCC +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDGEGCW*RCLPQP
Trigger: GGGTTGTGGCAGGCATCTTCACCAGCAGCCCTCACC...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGTCTTGGCCAGGCGGTTaGGCTGCAGTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQSWPGG*AAVCTR
Trigger: TCGTGTGCAAACTGCAGCGCAACCGCCTGGCCAAGA...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGTTTCCTTCATCATCATaGTCTGGGACCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPFPSSS*SGTFLS
Trigger: GGACAGAAAGGTCCCAGAGCATGATGATGAAGGAAA...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTCCTTCTCCCTGTCCTTaGTGGCTCAAGGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFPSPCP*WLKGQL
Trigger: CAGCTGACCCTTGAGCCAGCAAGGACAGGGAGAAGG...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTGCAAAGGCATCCCGGTaGTTGAGGCCCTTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFAKASR*LRPFVF
Trigger: GAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGC...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGAAGGACCCAGGAACCTaGAGGGCTCTGTGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGKDPGT*RALCAL
Trigger: CAGAGCGCACAGAGCCCTGCAGGTTCCTGGGTCCTT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTAGGCGAACGCTGCGGTaGTTCTGGGACCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: TLSQVTESSDILFFPGDSRRTLR*FWDQTG
Trigger: CCCTGTCTGGTCCCAGAACCACCGCAGCGTTCGCCT...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCTTTTCCCATGCAGGTTaGCTGTGTCCCGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSFSHAG*LCPGRR
Trigger: TCGTCTTCCGGGACACAGCCAACCTGCATGGGAAAA...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGAGGGCTTCTTGGTCTTaGCCAGGCGGTTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGRASWS*PGGCAA
Trigger: TGCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTGCAGCTGTTGGCAATaGCAAGGGCAGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGCSCWQ*QGQWPG
Trigger: CCCTGGCCACTGCCCTTGCCATTGCCAACAGCTGCA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACGGTGAGATCAGGGGCTaGCACCACCCTGACGCCCCA +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHGEIRG*HHPDAP
Trigger: TGGGGCGTCAGGGTGGTGCCAGCCCCTGATCTCACC...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGGTTACTTTCCCCATCTaGGCCTCAGCTATGTCATTT +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPVTFPI*ASAMSF
Trigger: AAATGACATAGCTGAGGCCCAGATGGGGAAAGTAAC...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCTGGCTCCCCCATCCTaGCCTGGACTGCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLLAPPS*PGLPEA
Trigger: GGCTTCTGGCAGTCCAGGCCAGGATGGGGGAGCCAG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 72 bp CTGGGCCCAGAGAGAAGGCTCTGGGCACTAAGTATGTaGGTTGCCTGTGCAGCAGTGCAGGTGAGCACACTT +
Preference number: 4 (lower is better)
Translates to: LGPERRLWALSM*VACAAVQVSTL
Trigger: AAGTGTGCTCACCTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCCCGGAAGGTCTTCCTaGGGGTTCCCTGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHPGRSS*GFPVTA
Trigger: TGCAGTCACAGGGAACCCTCAGGAAGACCTTCCGGG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGCACAGAGGAAGCGGGTaGCAGTCACCACCATGTGCC +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGHRGSG*QSPPCA
Trigger: GGCACATGGTGGTGACTGTCACCCGCTTCCTCTGTG...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGTGAGGGCTGCTGGTaGAGATGCCTGCCACAACCC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLGEGCW*RCLPQP
Trigger: GGGTTGTGGCAGGCATCTTCACCAGCAGCCCTCACC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACATCCCTGTGATGGGGTaGGGGCTGCTGGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHIPVMG*GLLVKM
Trigger: CATCTTCACCAGCAGCCCTCACCCCATCACAGGGAT...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGAGGCATCCCGGTGCTTaGGGCCCTTCGTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGRHPGA*GPSCSC
Trigger: GCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCT...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATGCCAGGCGGTTGCGCTaGAGTTTGCACACGATGGTG +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDARRLR*SLHTMV
Trigger: CACCATCGTGTGCAAACTGCAGCGCAACCGCCTGGC...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTCTTGGCCAGGCGGTTaGGCTGCAGTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHSWPGG*AAVCTR
Trigger: TCGTGTGCAAACTGCAGCGCAACCGCCTGGCCAAGA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGGCTGGTGAAGATGCCTaGCACAACCCCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMAGEDA*HNPTPR
Trigger: CCTGGGGGTGGGGTTGTGGCAGGCATCTTCACCAGC...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCAGGTGAGCACACTTTaGACACTGCAGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSQVSTL*TLQGRY
Trigger: ATATCGTCCCTGCAGTGTGCAAAGTGTGCTCACCTG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGCCCTCCCTTTGTCAGTaGCCAGTTTCCTCACCCCTT +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQPSLCQ*PVSSPL
Trigger: AAGGGGTGAGGAAACTGGGCACTGACAAAGGGAGGG...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATGCCACTCGAGGCTGTTaGGGAGACTTGCACACCCTG +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDATRGC*GDLHTL
Trigger: CAGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGC...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGATAGGTGATATGGATTaGGAGGAAGACGTTGAACAG +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPIGDMD*EEDVEQ
Trigger: CTGTTCAACGTCTTCCTCCCAATCCATATCACCTAT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGAGGGCTTCTTGGTCTTaGCCAGGCGGTTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQRASWS*PGGCAA
Trigger: TGCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCT...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTGCAGCTGTTGGCAATaGCAAGGGCAGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGCSCWQ*QGQWPG
Trigger: CCCTGGCCACTGCCCTTGCCATTGCCAACAGCTGCA...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCATTCCAAACAGCCCATaGCCTCGGGAACTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPIPNSP*PRELAQ
Trigger: CTGGGCGAGTTCCCGAGGCCATGGGCTGTTTGGAAT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGTCCCCCATCCTGGCCTaGACTGCCAGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMSPILA*TARSPG
Trigger: TCCTGGGCTTCTGGCAGTCCAGGCCAGGATGGGGGA...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTCTCCCTGTCCTTGCTaGCTCAAGGGTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGSPCPC*LKGQLE
Trigger: CTCCAGCTGACCCTTGAGCCAGCAAGGACAGGGAGA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCAGATGGGCTTCCCTCTaGTCTCTGCCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPRWASL*SLPGRS
Trigger: AGACCTTCCGGGCAGAGACCAGAGGGAAGCCCATCT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
3UTR CAA 72 bp GGGAATTATCTAAGGCTGGCAAAGGCATCCCGGTGCTaGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GNYLRLAKASRC*RPFVFLLFPSP
Trigger: GGGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCCAGCCTTAGATAATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCACAGAGGAAGCGGGTaGCAGTCACCACCATGTGCC +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHHRGSG*QSPPCA
Trigger: GGCACATGGTGGTGACTGTCACCCGCTTCCTCTGTG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACGGAGCTCTAGGAGGTTaGGTGTGTGGTAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNGALGG*VCGRGT
Trigger: GGTGCCCCTACCACACACTCAACCTCCTAGAGCTCC...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAGGTGAGGGCTGCTGGTaGAGATGCCTGCCACAACCC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEGEGCW*RCLPQP
Trigger: GGGTTGTGGCAGGCATCTTCACCAGCAGCCCTCACC...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTATCCCTGTGATGGGGTaGGGGCTGCTGGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: TLSQVTESSDILFFPGDSIPVMG*GLLVKM
Trigger: CATCTTCACCAGCAGCCCTCACCCCATCACAGGGAT...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGGAGATGGGGGCCACTaGGCAATATTTAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQGDGGH*AIFKAP
Trigger: GGGAGCTTTAAATATTGCTCAGTGGCCCCCATCTCC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCTTTCCAATGACAACATaGATTCCTGGCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSFPMTT*IPGSPI
Trigger: GATGGGGGAGCCAGGAATTCATGTTGTCATTGGAAA...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTTCTCCTTCCAAGGGCTaGAGAAGTTGGGCATTCAGG +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFSPSKG*RSWAFR
Trigger: CCTGAATGCCCAACTTCTTCAGCCCTTGGAAGGAGA...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCCTCTGGGGTCGAATTTaGGCCAATCCCCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPLWGRI*ANPLPL
Trigger: CAAAGGGAGGGGATTGGCTCAAATTCGACCCCAGAG...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACAGGCAGGGCAGGAGTTaGGGAATCACCGACCACTTT +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHRQGRS*GITDHF
Trigger: AAAGTGGTCGGTGATTCCTCAACTCCTGCCCTGCCT...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGCAGGATATTTTCCCATaGAGGTTGGCTGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQQDIFP*RLAVSR
Trigger: CCGGGACACAGCCAACCTGCATGGGAAAATATCCTG...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGACAGTCACCACCATGTaGCGGCTATACCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGTVTTM*RLYPTG
Trigger: CCCTGTGGGGTATAGCCGGCACATGGTGGTGACTGT...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCGCATCACACTGGGTTTaGTCTGACCCCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPASHWV*SDPLTA
Trigger: AGCAGTGAGGGGGTCAGAGCAAACCCAGTGTGATGC...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGCTCCCAGATCACCTATaGATTTCCACATACTTTAAC +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPLPDHL*ISTYFN
Trigger: GTTAAAGTATGTGGAAATGCATAGGTGATCTGGGAG...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGCACTTGTCTTGCCCTTaGAAAGAGCCCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQHLSCP*KEPTGP
Trigger: AGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTG...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTCAAGGGACTGCCTCCTaGCAGCTTTCCCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: TLSQVTESSDILFFPGDSQGTAS*QLSLPI
Trigger: AATGGGGAGGGAAAGCTGGCAGGAGGCAGTCCCTTG...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCATCCTGGCCTGGACTaGCAGAAGCCCAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHHPGLD*QKPRKS
Trigger: GCTTTTCCTGGGCTTCTGGCAGTCCAGGCCAGGATG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGAGCCGGTTTGAATTGTaGTCCTGTTTATCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPSRFEL*SCLSAF
Trigger: AAAAGCTGATAAACAGGAGCACAATTCAAACCGGCT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGAAGGACCCAGGAACCTaGAGGGCTCTGTGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMKDPGT*RALCAL
Trigger: CAGAGCGCACAGAGCCCTGCAGGTTCCTGGGTCCTT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTACCCCTTCTGAACCTTaGTGCCAGAATCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFTPSEP*CQNLCA
Trigger: GGCACAGAGATTCTGGCAGCAAGGTTCAGAAGGGGT...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGGCCACTCGAGGCTGTTaGGGAGACTTGCACACCCTG +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMATRGC*GDLHTL
Trigger: CAGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGC...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCCACCAGGAAGATCCTaGTCACCCTGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHPPGRS*SPWLPR
Trigger: CCTTGGAAGCCAGGGTGACCAGGATCTTCCTGGTGG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGCCACCAGGAAGATCCTaGTCACCCTGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGPPGRS*SPWLPR
Trigger: CCTTGGAAGCCAGGGTGACCAGGATCTTCCTGGTGG...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCCATTTGGGAGTGAGTaGGCCACGAGGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQPFGSE*ATRKTQ
Trigger: CTGGGTCTTCCTCGTGGCCCACTCACTCCCAAATGG...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATCCAGGCATGGCAGTGTaGTGGAGCTCTAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDPGMAV*WSSRRL
Trigger: CAACCTCCTAGAGCTCCACCACACTGCCATGCCTGG...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGATTCCAAACAGCCCATaGCCTCGGGAACTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQIPNSP*PRELAQ
Trigger: CTGGGCGAGTTCCCGAGGCCATGGGCTGTTTGGAAT...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACGACAACATGAATTCCTaGCTCCCCCATCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHDNMNS*LPHPGL
Trigger: CAGGCCAGGATGGGGGAGCCAGGAATTCATGTTGTC...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCCCTCATCTGTGAAATaGGAGACATCTGGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSPSSVK*ETSGQD
Trigger: ATCTTGCCCAGATGTCTCCCATTTCACAGATGAGGG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATAAGCCAGGACCCAGATaGCCATGCAGGCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDKPGPR*PCRPCK
Trigger: CTTACATGGCCTGCATGGTCATCTGGGTCCTGGCTT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGGGGCAAACCCAGGCTaGAGACAGAGCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQGANPG*RQSQAW
Trigger: CCATGCCTGGCTCTGTCTTCAGCCTGGGTTTGCCCC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATACACTGGGTTTGCTCTaGCCCCCTCACTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHTLGLL*PPHCSH
Trigger: GTGTGAGCAGTGAGGGGGTCAGAGCAAACCCAGTGT...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCTCTGTCTTCCTAGCTaGTCCGAAAGCCAAATTCAT +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSLCLPS*SESQIH
Trigger: ATGAATTTGGCTTTCGGATCAGCTAGGAAGACAGAG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGTGCGATGTTCTAGGGTaGGCTGCTCCATGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQCDVLG*AAPCLH
Trigger: ATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCA...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACCTGCCAGGGCCAATTTaGGGTTTCAGTGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHLPGPI*GFSVCA
Trigger: GGCACAAACACTGAAACCTCAAATTGGCCCTGGCAG...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTTCAGGCAGCTGACCTaGTTCAAAGCCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPFRQLT*FKAQLH
Trigger: ATGGAGCTGGGCTTTGAATCAGGTCAGCTGCCTGAA...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATGGGCATTCAGGCAGCTaGCCTGATTCAAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHGHSGS*PDSKPS
Trigger: GCTGGGCTTTGAATCAGGTCAGCTGCCTGAATGCCC...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTGGGCATTCAGGCAGCTaGCCTGATTCAAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSGHSGS*PDSKPS
Trigger: GCTGGGCTTTGAATCAGGTCAGCTGCCTGAATGCCC...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGCTCTGGGGTCGAATTTaGGCCAATCCCCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGLWGRI*ANPLPL
Trigger: CAAAGGGAGGGGATTGGCTCAAATTCGACCCCAGAG...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCTTCCCTCTGGTCTCTaGCCGGAAGGTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHLPSGL*PEGLPE
Trigger: CTCAGGAAGACCTTCCGGGCAGAGACCAGAGGGAAG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGCAGGAAATCTGCCACTaGCAGGTTGAGGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGQEICH*QVEEPD
Trigger: GTCTGGTTCCTCAACCTGGCAGTGGCAGATTTCCTG...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATACAGTCACCACCATGTaGCGGCTATACCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHTVTTM*RLYPTG
Trigger: CCCTGTGGGGTATAGCCGGCACATGGTGGTGACTGT...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTTCTTGGCCAGGCGGTTaGGCTGCAGTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSSWPGG*AAVCTR
Trigger: TCGTGTGCAAACTGCAGCGCAACCGCCTGGCCAAGA...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCAATCCCACCGCCCTATaGCAATCCCAGTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPNPTAL*QSQFMA
Trigger: TGCCATGAACTGGGATTGGCATAGGGCGGTGGGATT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGATCCCTCACTTGTCTTaGCCTTGCAAAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQIPHLS*PCKEPT
Trigger: TGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGAT...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTATCCCTCACTTGTCTTaGCCTTGCAAAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFIPHLS*PCKEPT
Trigger: TGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGAT...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTTGTTCTAGGGTGAGCTaGTCCATGCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFCSRVS*SMPASF
Trigger: AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACA...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTGGGACTCTCCGGAGTTaGTTCCCAAAGCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFGTLRS*FPKLHF
Trigger: AAAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCC...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCATCCTGGCCTGGACTaGCAGAAGCCCAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLHPGLD*QKPRKS
Trigger: GCTTTTCCTGGGCTTCTGGCAGTCCAGGCCAGGATG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCATCCTGGCCTGGACTaGCAGAAGCCCAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNHPGLD*QKPRKS
Trigger: GCTTTTCCTGGGCTTCTGGCAGTCCAGGCCAGGATG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTATGTTGGTTGCCTGTaGAGCAGTGCAGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGYVGCL*SSAGEH
Trigger: GTGCTCACCTGCACTGCTGCACAGGCAACCAACATA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCCTTCTCCCTGTCCTTaGTGGCTCAAGGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHPSPCP*WLKGQL
Trigger: CAGCTGACCCTTGAGCCAGCAAGGACAGGGAGAAGG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCCTTCTCCCTGTCCTTaGTGGCTCAAGGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMPSPCP*WLKGQL
Trigger: CAGCTGACCCTTGAGCCAGCAAGGACAGGGAGAAGG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGCAAAGGCATCCCGGTaGTTGAGGCCCTTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLAKASR*LRPFVF
Trigger: GAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATAATCACAGGCTCCTCTaGCTGTGGCTGTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDNHRLL*LWLFAQ
Trigger: CTGGGCAAACAGCCACAGCCAGAGGAGCCTGTGATT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAGCCACTCGAGGCTGTTaGGGAGACTTGCACACCCTG +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEATRGC*GDLHTL
Trigger: CAGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGC...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATGAAACACCTTCCCTCTaGTCTCTGCCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDETPSL*SLPGRS
Trigger: AGACCTTCCGGGCAGAGACCAGAGGGAAGGTGTTTC...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312143.11
CDS-3UTR CCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGAGATCCTGGTCACCCTaGCTTCCAAGGGGGATAAGT +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGRSWSP*LPRGIS
Trigger: ACTTATCCCCCTTGGAAGCCAGGGTGACCAGGATCT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCCACCAGGAAGATCCTaGTCACCCTGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHPPGRS*SPWLPR
Trigger: CCTTGGAAGCCAGGGTGACCAGGATCTTCCTGGTGG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCCATTTGGGAGTGAGTaGGCCACGAGGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLPFGSE*ATRKTQ
Trigger: CTGGGTCTTCCTCGTGGCCCACTCACTCCCAAATGG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACCCATTTGGGAGTGAGTaGGCCACGAGGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHPFGSE*ATRKTQ
Trigger: CTGGGTCTTCCTCGTGGCCCACTCACTCCCAAATGG...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATGGCATGGCAGTGTGGTaGAGCTCTAGGAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHGMAVW*SSRRLS
Trigger: ACTCAACCTCCTAGAGCTCCACCACACTGCCATGCC...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGGGCATGGCAGTGTGGTaGAGCTCTAGGAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQGMAVW*SSRRLS
Trigger: ACTCAACCTCCTAGAGCTCCACCACACTGCCATGCC...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCCAGGCATGGCAGTGTaGTGGAGCTCTAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHPGMAV*WSSRRL
Trigger: CAACCTCCTAGAGCTCCACCACACTGCCATGCCTGG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTAGACAGAGCCAGGCATaGCAGTGTGGTGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: TLSQVTESSDILFFPGDSRQSQA*QCGGAL
Trigger: TAGAGCTCCACCACACTGCCATGCCTGGCTCTGTCT...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAATGCAGCTGTTGGCAATaGCAAGGGCAGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMECSCWQ*QGQWPG
Trigger: CCCTGGCCACTGCCCTTGCCATTGCCAACAGCTGCA...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTCATTGCCTTGATCTCTaGAGACATAGGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFHCLDL*RHRRWE
Trigger: CTCCCACCTCCTATGTCTCCAGAGATCAAGGCAATG...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACATTCCAAACAGCCCATaGCCTCGGGAACTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNIPNSP*PRELAQ
Trigger: CTGGGCGAGTTCCCGAGGCCATGGGCTGTTTGGAAT...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTGGGAAGAGGGGAGATaGGGGCCACTGAGCAATATT +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHWEEGR*GPLSNI
Trigger: AATATTGCTCAGTGGCCCCCATCTCCCCTCTTCCCA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTGACAACATGAATTCCTaGCTCCCCCATCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLSQVTESSDILFFPGDSDNMNS*LPHPGL
Trigger: CAGGCCAGGATGGGGGAGCCAGGAATTCATGTTGTC...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 72 bp CTTTGCCAAATCTCAAGTCCTCGTTGCATCCCTCACTaGTCTTGCCCTTGCAAAGAGCCCACAGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LCQISSPRCIPH*SCPCKEPTGPL
Trigger: GAGAGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATGCAACGAGGACTTGAGATTTGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 72 bp CCGACCACTTTCATCCAAACCAGACACCACCTCGTTTaGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: PTTFIQTRHHLV*QSPQGKLSKPQ
Trigger: CTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 72 bp CCAGCAGCAATTTTCCAAACCCAGGATTTGGTAACCTaGGGCCTAGGGCATCCCAGCCCCAACAAGAGCATA +
Preference number: 4 (lower is better)
Translates to: PAAIFQTQDLVT*GLGHPSPNKSI
Trigger: TATGCTCTTGTTGGGGCTGGGATGCCCTAGGCCCAAGGTTACCAAATCCTGGGTTTGGAAAATTGCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGCCCGGAAGGTCTTCCTaGGGGTTCCCTGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERPGRSS*GFPVTA
Trigger: TGCAGTCACAGGGAACCCTCAGGAAGACCTTCCGGG...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATTGCAGCTCTCCAATGTaGGTCCTCAGCCAATCAGTC +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHCSSPM*VLSQSV
Trigger: GACTGATTGGCTGAGGACTCACATTGGAGAGCTGCA...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCTGCCACTGCCAGGTTaGGGAACCAGACCATGTTCA +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNLPLPG*GTRPCS
Trigger: TGAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCTGCCACTGCCAGGTTaGGGAACCAGACCATGTTCA +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHLPLPG*GTRPCS
Trigger: TGAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCCATGGCGGCATAGGTaGTATGGATTGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHPWRHR*YGLGGR
Trigger: TCTTCCTCCCAATCCATATCACCTATGCCGCCATGG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGAGCTCTAGGAGGTTaGGTGTGTGGTAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERGALGG*VCGRGT
Trigger: GGTGCCCCTACCACACACTCAACCTCCTAGAGCTCC...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGTGCGATGTTCTAGGGTaGGCTGCTCCATGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMCDVLG*AAPCLH
Trigger: ATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCA...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTTCTGTCTCAAGTGACTaGGTCCTCGGACATACTCTT +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFSVSSD*VLGHTL
Trigger: AAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGA...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGGCTGTTAATGGCTGTTaGGGGAGCTGGAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGAVNGC*GSWKPS
Trigger: ACTTGGCTTCCAGCTCCCTCAACAGCCATTAACAGC...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATTCTCCTTCCAAGGGCTaGAGAAGTTGGGCATTCAGG +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHSPSKG*RSWAFR
Trigger: CCTGAATGCCCAACTTCTTCAGCCCTTGGAAGGAGA...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTTTCCTCACCCCTTCTaGACCTTGCTGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHFPHPF*TLLPES
Trigger: AGATTCTGGCAGCAAGGTTCAGAAGGGGTGAGGAAA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACCTCTGGGGTCGAATTTaGGCCAATCCCCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHLWGRI*ANPLPL
Trigger: CAAAGGGAGGGGATTGGCTCAAATTCGACCCCAGAG...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGCAGTTCCCTCATCTGTaGAATGGGAGACATCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGQFPHL*NGRHLG
Trigger: GCCCAGATGTCTCCCATTTCACAGATGAGGGAACTG...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATAGGCAGGGCAGGAGTTaGGGAATCACCGACCACTTT +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHRQGRS*GITDHF
Trigger: AAAGTGGTCGGTGATTCCTCAACTCCTGCCCTGCCT...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGAGGCAGGGCAGGAGTTaGGGAATCACCGACCACTTT +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLRQGRS*GITDHF
Trigger: AAAGTGGTCGGTGATTCCTCAACTCCTGCCCTGCCT...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCAGGAAATCTGCCACTaGCAGGTTGAGGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHQEICH*QVEEPD
Trigger: GTCTGGTTCCTCAACCTGGCAGTGGCAGATTTCCTG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGCAGGATATTTTCCCATaGAGGTTGGCTGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGQDIFP*RLAVSR
Trigger: CCGGGACACAGCCAACCTGCATGGGAAAATATCCTG...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAACAGTCACCACCATGTaGCGGCTATACCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMETVTTM*RLYPTG
Trigger: CCCTGTGGGGTATAGCCGGCACATGGTGGTGACTGT...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGCCAGGCGGTTGCGCTaGAGTTTGCACACGATGGTG +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQARRLR*SLHTMV
Trigger: CACCATCGTGTGCAAACTGCAGCGCAACCGCCTGGC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCTCTTGGCCAGGCGGTTaGGCTGCAGTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFSWPGG*AAVCTR
Trigger: TCGTGTGCAAACTGCAGCGCAACCGCCTGGCCAAGA...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTGCATCACACTGGGTTTaGTCTGACCCCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSASHWV*SDPLTA
Trigger: AGCAGTGAGGGGGTCAGAGCAAACCCAGTGTGATGC...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTGGGCCAAGTGTGATCTaGATCACACTGGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TLSQVTESSDILFFPGDSGPSVI*ITLGLL
Trigger: GAGCAAACCCAGTGTGATGCAGATCACACTTGGCCC...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATCACTTGTCTTGCCCTTaGAAAGAGCCCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDHLSCP*KEPTGP
Trigger: AGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTG...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTGTTCTAGGGTGAGCTaGTCCATGCCTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPCSRVS*SMPASF
Trigger: AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACA...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACAAGGGACTGCCTCCTaGCAGCTTTCCCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEQGTAS*QLSLPI
Trigger: AATGGGGAGGGAAAGCTGGCAGGAGGCAGTCCCTTG...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACGGCCCTTCGTGTTCTTaGTCTTCCCTTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHGPSCS*SSLLPV
Trigger: GACAGGGAGAAGGGAAGAGCAAGAACACGAAGGGCC...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCCCTTCGTGTTCTTaGTCTTCCCTTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLGPSCS*SSLLPV
Trigger: GACAGGGAGAAGGGAAGAGCAAGAACACGAAGGGCC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGAAGGACCCAGGAACCTaGAGGGCTCTGTGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQKDPGT*RALCAL
Trigger: CAGAGCGCACAGAGCCCTGCAGGTTCCTGGGTCCTT...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATACCCCTTCTGAACCTTaGTGCCAGAATCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDTPSEP*CQNLCA
Trigger: GGCACAGAGATTCTGGCAGCAAGGTTCAGAAGGGGT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCCCTCCCTTTGTCAGTaGCCAGTTTCCTCACCCCTT +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNPSLCQ*PVSSPL
Trigger: AAGGGGTGAGGAAACTGGGCACTGACAAAGGGAGGG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACGACACCACCTCGTTTTaGAGAGTCCTCAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNDTTSF*RVLRGS
Trigger: GCTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTC...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACAGGCTCCTCTGGCTGTaGCTGTTTGCCCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHRLLWL*LFAQKA
Trigger: TGCTTTCTGGGCAAACAGCCACAGCCAGAGGAGCCT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACAATCACAGGCTCCTCTaGCTGTGGCTGTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNNHRLL*LWLFAQ
Trigger: CTGGGCAAACAGCCACAGCCAGAGGAGCCTGTGATT...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGAGATCCTGGTCACCCTaGCTTCCAAGGGGGATAAGT +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGRSWSP*LPRGIS
Trigger: ACTTATCCCCCTTGGAAGCCAGGGTGACCAGGATCT...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAGGCGAACGCTGCGGTaGTTCTGGGACCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKRRTLR*FWDQTG
Trigger: CCCTGTCTGGTCCCAGAACCACCGCAGCGTTCGCCT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGTGTGATGATGAGGACTaGGACCAGGAAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQCDDED*DQEATE
Trigger: CTCTGTGGCTTCCTGGTCCCAGTCCTCATCATCACA...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGAGGGCTTCTTGGTCTTaGCCAGGCGGTTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQRASWS*PGGCAA
Trigger: TGCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCT...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGAGACAGAGCCAGGCATaGCAGTGTGGTGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLRQSQA*QCGGAL
Trigger: TAGAGCTCCACCACACTGCCATGCCTGGCTCTGTCT...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATAGACAGAGCCAGGCATaGCAGTGTGGTGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHRQSQA*QCGGAL
Trigger: TAGAGCTCCACCACACTGCCATGCCTGGCTCTGTCT...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGCATTGCCTTGATCTCTaGAGACATAGGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGHCLDL*RHRRWE
Trigger: CTCCCACCTCCTATGTCTCCAGAGATCAAGGCAATG...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATCCCCCATCCTGGCCTaGACTGCCAGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPSPILA*TARSPG
Trigger: TCCTGGGCTTCTGGCAGTCCAGGCCAGGATGGGGGA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCATTCCTCCCACTCTTTaGACTTCCATTCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPIPPTL*TSIPLP
Trigger: GGGGAGAGGAATGGAAGTCCAAAGAGTGGGAGGAAT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTAGATGGGCTTCCCTCTaGTCTCTGCCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQARWASL*SLPGRS
Trigger: AGACCTTCCGGGCAGAGACCAGAGGGAAGCCCATCT...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACGTTCTGCTGGAGAGATaGGCTTCCCTCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNVLLER*ASLWSL
Trigger: CAGAGACCAGAGGGAAGCCCATCTCTCCAGCAGAAC...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATTCCAAGCAGTTCTGCTaGAGAGATGGGCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDSKQFC*RDGLPS
Trigger: AGAGGGAAGCCCATCTCTCCAGCAGAACTGCTTGGA...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550402.6
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGTGCAGCTCTCCAATGTaGGTCCTCAGCCAATCAGTC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLCSSPM*VLSQSV
Trigger: GACTGATTGGCTGAGGACTCACATTGGAGAGCTGCA...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCCATGGCGGCATAGGTaGTATGGATTGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMPWRHR*YGLGGR
Trigger: TCTTCCTCCCAATCCATATCACCTATGCCGCCATGG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCACACAGAGGAAGCGGGTaGCAGTCACCACCATGTGCC +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPHRGSG*QSPPCA
Trigger: GGCACATGGTGGTGACTGTCACCCGCTTCCTCTGTG...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTCTGTCTCAAGTGACTaGGTCCTCGGACATACTCTT +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHSVSSD*VLGHTL
Trigger: AAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACGCTGTTAATGGCTGTTaGGGGAGCTGGAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHAVNGC*GSWKPS
Trigger: ACTTGGCTTCCAGCTCCCTCAACAGCCATTAACAGC...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGAGATGGGGGCCACTaGGCAATATTTAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLGDGGH*AIFKAP
Trigger: GGGAGCTTTAAATATTGCTCAGTGGCCCCCATCTCC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACGGAGATGGGGGCCACTaGGCAATATTTAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHGDGGH*AIFKAP
Trigger: GGGAGCTTTAAATATTGCTCAGTGGCCCCCATCTCC...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTGGAAAACAGCCGGTTTaGATTGTGCTCCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFGKQPV*IVLLFI
Trigger: GATAAACAGGAGCACAATTCAAACCGGCTGTTTTCC...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCGGGACGATATATGCATaGCCCATGGAGATGTTCACA +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPGTIYA*PMEMFT
Trigger: TGTGAACATCTCCATGGGTCATGCATATATCGTCCC...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCTGCCAGGGCCAATTTaGGGTTTCAGTGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNLPGPI*GFSVCA
Trigger: GGCACAAACACTGAAACCTCAAATTGGCCCTGGCAG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGTTCAGGCAGCTGACCTaGTTCAAAGCCCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLFRQLT*FKAQLH
Trigger: ATGGAGCTGGGCTTTGAATCAGGTCAGCTGCCTGAA...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAGGCATCCCGGTGCTTaGGGCCCTTCGTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKRHPGA*GPSCSC
Trigger: GCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCAGTTCCCTCATCTGTaGAATGGGAGACATCTGGGC +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMQFPHL*NGRHLG
Trigger: GCCCAGATGTCTCCCATTTCACAGATGAGGGAACTG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACCAGGAAATCTGCCACTaGCAGGTTGAGGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHQEICH*QVEEPD
Trigger: GTCTGGTTCCTCAACCTGGCAGTGGCAGATTTCCTG...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCGTTGAACAGGAAATCTaGCACTGCCAGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPVEQEI*HCQVEE
Trigger: TTCCTCAACCTGGCAGTGGCAGATTTCCTGTTCAAC...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACGTTGAACAGGAAATCTaGCACTGCCAGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHVEQEI*HCQVEE
Trigger: TTCCTCAACCTGGCAGTGGCAGATTTCCTGTTCAAC...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCAGGATATTTTCCCATaGAGGTTGGCTGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLQDIFP*RLAVSR
Trigger: CCGGGACACAGCCAACCTGCATGGGAAAATATCCTG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGACAGTCACCACCATGTaGCGGCTATACCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQTVTTM*RLYPTG
Trigger: CCCTGTGGGGTATAGCCGGCACATGGTGGTGACTGT...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCGCCAGGCGGTTGCGCTaGAGTTTGCACACGATGGTG +
Preference number: 4 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSARRLR*SLHTMV
Trigger: CACCATCGTGTGCAAACTGCAGCGCAACCGCCTGGC...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGACAGAATGGGGTTCATaGAGCTGTTGGCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGTEWGS*SCWQWQ
Trigger: TTGCCATTGCCAACAGCTGCATGAACCCCATTCTGT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGAATCCCACCGCCCTATaGCAATCCCAGTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMNPTAL*QSQFMA
Trigger: TGCCATGAACTGGGATTGGCATAGGGCGGTGGGATT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCGCATCACACTGGGTTTaGTCTGACCCCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFASHWV*SDPLTA
Trigger: AGCAGTGAGGGGGTCAGAGCAAACCCAGTGTGATGC...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCTCCCAGATCACCTATaGATTTCCACATACTTTAAC +
Preference number: 4 (lower is better)
Translates to: GKGIPVLEALRVLALPFSLPDHL*ISTYFN
Trigger: GTTAAAGTATGTGGAAATGCATAGGTGATCTGGGAG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCACTTGTCTTGCCCTTaGAAAGAGCCCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLHLSCP*KEPTGP
Trigger: AGGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGATCTCAAGTCCTCGTTaGATCCCTCACTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGISSPR*IPHLSC
Trigger: GCAAGACAAGTGAGGGATGCAACGAGGACTTGAGAT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCGAGCTGGAAGCCAAGTaGATTTTCTCTGCCATGTTG +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPELEAK*IFSAML
Trigger: CAACATGGCAGAGAAAATGCACTTGGCTTCCAGCTC...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAAGGCCCACAAGGGACTaGCTCCTGCCAGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPRPTRD*LLPAFP
Trigger: AGGGAAAGCTGGCAGGAGGCAGTCCCTTGTGGGCCT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAGGCCCACAAGGGACTaGCTCCTGCCAGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKRPTRD*LLPAFP
Trigger: AGGGAAAGCTGGCAGGAGGCAGTCCCTTGTGGGCCT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTTGCAGGGACGATATATaGATGACCCATGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFCRDDI*MTHGDV
Trigger: AACATCTCCATGGGTCATGCATATATCGTCCCTGCA...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCGCACACTTTGCACACTaGAGGGACGATATATGCATG +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPAHFAH*RDDICM
Trigger: CATGCATATATCGTCCCTGCAGTGTGCAAAGTGTGC...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACGCACACTTTGCACACTaGAGGGACGATATATGCATG +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHAHFAH*RDDICM
Trigger: CATGCATATATCGTCCCTGCAGTGTGCAAAGTGTGC...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACACTAAGTATGTTGGTTaGCTGTGCAGCAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHTKYVG*LCSSAG
Trigger: ACCTGCACTGCTGCACAGGCAACCAACATACTTAGT...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGCTGAACCATCGTAGGTaGTTCATGAATGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGLNHRR*FMNARS
Trigger: GGATCTGGCATTCATGAAGCACCTACGATGGTTCAG...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCAGGTTTCAGTGTTTGTaGCTGAACCATCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPRFQCL*LNHRRC
Trigger: GCACCTACGATGGTTCAGGCACAAACACTGAAACCT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGATGATGGTCCCCTTCTaGCAGGGCCAATTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQMMVPF*QGQFEV
Trigger: AACCTCAAATTGGCCCTGGCAGAAGGGGACCATCAT...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAGGCCCTTCGTGTTCTTaGTCTTCCCTTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEGPSCS*SSLLPV
Trigger: GACAGGGAGAAGGGAAGAGCAAGAACACGAAGGGCC...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGCAAAGGCATCCCGGTaGTTGAGGCCCTTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQAKASR*LRPFVF
Trigger: GAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGCCTTCTGAACCTTGCTaGCAGAATCTCTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGPSEPC*QNLCAS
Trigger: AGAGGCACAGAGATTCTGGCAGCAAGGTTCAGAAGG...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCCTTCTGAACCTTGCTaGCAGAATCTCTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHPSEPC*QNLCAS
Trigger: AGAGGCACAGAGATTCTGGCAGCAAGGTTCAGAAGG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTGACACCACCTCGTTTTaGAGAGTCCTCAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQADTTSF*RVLRGS
Trigger: GCTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTC...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATAAATCCAAGCAGTTCTaGTGGAGAGATGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHKSKQF*WRDGLP
Trigger: GGGAAGCCCATCTCTCCAGCAGAACTGCTTGGATTT...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTAGGCTCCTCTGGCTGTaGCTGTTTGCCCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQARLLWL*LFAQKA
Trigger: TGCTTTCTGGGCAAACAGCCACAGCCAGAGGAGCCT...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATGAGACTTGCACACCCTaGCTTCTTTCTGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHETCTP*LLSANH
Trigger: GTGATTGGCAGAAAGAAGCCAGGGTGTGCAAGTCTC...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGCCACCAGGAAGATCCTaGTCACCCTGGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERPPGRS*SPWLPR
Trigger: CCTTGGAAGCCAGGGTGACCAGGATCTTCCTGGTGG...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTTTTTCCCATGCAGGTTaGCTGTGTCCCGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSFSHAG*LCPGRR
Trigger: TCGTCTTCCGGGACACAGCCAACCTGCATGGGAAAA...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGTGATGATGAGGACTaGGACCAGGAAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHCDDED*DQEATE
Trigger: CTCTGTGGCTTCCTGGTCCCAGTCCTCATCATCACA...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTGGCATGGCAGTGTGGTaGAGCTCTAGGAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAGMAVW*SSRRLS
Trigger: ACTCAACCTCCTAGAGCTCCACCACACTGCCATGCC...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCAGACAGAGCCAGGCATaGCAGTGTGGTGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFRQSQA*QCGGAL
Trigger: TAGAGCTCCACCACACTGCCATGCCTGGCTCTGTCT...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGACCAGGAATGGACCTTaGAGAGTGTCATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGTRNGP*RVSFLG
Trigger: CCCCAGAAATGACACTCTCCAAGGTCCATTCCTGGT...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACTGGGAAGAGGGGAGATaGGGGCCACTGAGCAATATT +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHWEEGR*GPLSNI
Trigger: AATATTGCTCAGTGGCCCCCATCTCCCCTCTTCCCA...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCTGGCTCCCCCATCCTaGCCTGGACTGCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRLAPPS*PGLPEA
Trigger: GGCTTCTGGCAGTCCAGGCCAGGATGGGGGAGCCAG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCCATGTCTCCTTCCGTaGGCAGAATCACAGACACCT +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLPCLLP*AESQTP
Trigger: AGGTGTCTGTGATTCTGCCCACGGAAGGAGACATGG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412676.5
3UTR CAA 72 bp TCCCCTTCTGCCAGGGCCAATTTGAGGTTTCAGTGTTaGTGCCTGAACCATCGTAGGTGCTTCATGAATGCC +
Preference number: 4 (lower is better)
Translates to: SPSARANLRFQC*CLNHRRCFMNA
Trigger: GGCATTCATGAAGCACCTACGATGGTTCAGGCACAAACACTGAAACCTCAAATTGGCCCTGGCAGAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAATGCAGCTCTCCAATGTaGGTCCTCAGCCAATCAGTC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMECSSPM*VLSQSV
Trigger: GACTGATTGGCTGAGGACTCACATTGGAGAGCTGCA...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGAAGCCAGGACCCAGATaGCCATGCAGGCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERKPGPR*PCRPCK
Trigger: CTTACATGGCCTGCATGGTCATCTGGGTCCTGGCTT...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAACACTGGGTTTGCTCTaGCCCCCTCACTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPTLGLL*PPHCSH
Trigger: GTGTGAGCAGTGAGGGGGTCAGAGCAAACCCAGTGT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGATGGAGTTCATGGGCTaGTATGTCACCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMMEFMG*YVTFLS
Trigger: GGAGAGGAAGGTGACATATCAGCCCATGAACTCCAT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATTCTGTCTCAAGTGACTaGGTCCTCGGACATACTCTT +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDSVSSD*VLGHTL
Trigger: AAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGA...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATTTTCCAATGACAACATaGATTCCTGGCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDFPMTT*IPGSPI
Trigger: GATGGGGGAGCCAGGAATTCATGTTGTCATTGGAAA...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATATGGAGATGTTCACATaGAGCTGTGGGGACAAGACT +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDMEMFT*SCGDKT
Trigger: AGTCTTGTCCCCACAGCTTCATGTGAACATCTCCAT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACTTTCCTCACCCCTTCTaGACCTTGCTGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHFPHPF*TLLPES
Trigger: AGATTCTGGCAGCAAGGTTCAGAAGGGGTGAGGAAA...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTCAGTTCCCTCATCTGTaGAATGGGAGACATCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAQFPHL*NGRHLG
Trigger: GCCCAGATGTCTCCCATTTCACAGATGAGGGAACTG...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAGGGTTCCCTGTGACTaGAGGCCACTCGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKRVPCD*RPLEAV
Trigger: AACAGCCTCGAGTGGCCTGCAGTCACAGGGAACCCT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGATATTTTCCCATaGAGGTTGGCTGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFQDIFP*RLAVSR
Trigger: CCGGGACACAGCCAACCTGCATGGGAAAATATCCTG...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGGTGAGGATCAAAGCATaGCGGTCTCCCTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMVRIKA*RSPSHS
Trigger: TGAATGAGAGGGAGACCGGCATGCTTTGATCCTCAC...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATATCTCAAGTCCTCGTTaGATCCCTCACTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDISSPR*IPHLSC
Trigger: GCAAGACAAGTGAGGGATGCAACGAGGACTTGAGAT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATGTTGCTTCCCAAAGCTaGATTTTGGACCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDVASQS*ILDLSP
Trigger: TGGAGACAGGTCCAAAATGCAGCTTTGGGAAGCAAC...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGGAGCTGGAAGCCAAGTaGATTTTCTCTGCCATGTTG +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQELEAK*IFSAML
Trigger: CAACATGGCAGAGAAAATGCACTTGGCTTCCAGCTC...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTGCAGGGACGATATATaGATGACCCATGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHCRDDI*MTHGDV
Trigger: AACATCTCCATGGGTCATGCATATATCGTCCCTGCA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCAGGTGAGCACACTTTaGACACTGCAGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSQVSTL*TLQGRY
Trigger: ATATCGTCCCTGCAGTGTGCAAAGTGTGCTCACCTG...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACCAGGTGAGCACACTTTaGACACTGCAGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHQVSTL*TLQGRY
Trigger: ATATCGTCCCTGCAGTGTGCAAAGTGTGCTCACCTG...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCTGAACCATCGTAGGTaGTTCATGAATGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHLNHRR*FMNARS
Trigger: GGATCTGGCATTCATGAAGCACCTACGATGGTTCAG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACATGATGGTCCCCTTCTaGCAGGGCCAATTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNMMVPF*QGQFEV
Trigger: AACCTCAAATTGGCCCTGGCAGAAGGGGACCATCAT...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACATGATGGTCCCCTTCTaGCAGGGCCAATTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHMMVPF*QGQFEV
Trigger: AACCTCAAATTGGCCCTGGCAGAAGGGGACCATCAT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGCCCTCCCTTTGTCAGTaGCCAGTTTCCTCACCCCTT +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQPSLCQ*PVSSPL
Trigger: AAGGGGTGAGGAAACTGGGCACTGACAAAGGGAGGG...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGACACCACCTCGTTTTaGAGAGTCCTCAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQDTTSF*RVLRGS
Trigger: GCTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGAGGCTCCTCTGGCTGTaGCTGTTTGCCCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERRLLWL*LFAQKA
Trigger: TGCTTTCTGGGCAAACAGCCACAGCCAGAGGAGCCT...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTGAGACTTGCACACCCTaGCTTCTTTCTGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSETCTP*LLSANH
Trigger: GTGATTGGCAGAAAGAAGCCAGGGTGTGCAAGTCTC...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCACCATTTGGGAGTGAGTaGGCCACGAGGAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPPFGSE*ATRKTQ
Trigger: CTGGGTCTTCCTCGTGGCCCACTCACTCCCAAATGG...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTTGTGATGATGAGGACTaGGACCAGGAAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQACDDED*DQEATE
Trigger: CTCTGTGGCTTCCTGGTCCCAGTCCTCATCATCACA...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGCCAGGCATGGCAGTGTaGTGGAGCTCTAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKPGMAV*WSSRRL
Trigger: CAACCTCCTAGAGCTCCACCACACTGCCATGCCTGG...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATGGCCTATGGAGTTCATaGGCTGATATGTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHGLWSS*ADMSPS
Trigger: GGAAGGTGACATATCAGCCCATGAACTCCATAGGCC...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACGGGGACAAGACTGTATaGGATGTTAAGGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHGDKTV*DVKAAF
Trigger: AAATGCAGCCTTAACATCCCATACAGTCTTGTCCCC...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCATCATCATGCTCTaGGACCTTTCTGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGFIIML*DLSVPS
Trigger: AGAGGGGACAGAAAGGTCCCAGAGCATGATGATGAA...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGATTCCTCCCACTCTTTaGACTTCCATTCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLIPPTL*TSIPLP
Trigger: GGGGAGAGGAATGGAAGTCCAAAGAGTGGGAGGAAT...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGTCTCCCTGTCCTTGCTaGCTCAAGGGTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKSPCPC*LKGQLE
Trigger: CTCCAGCTGACCCTTGAGCCAGCAAGGACAGGGAGA...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 72 bp GAAAAGCCATGCCAGGCACCTGTATCCAGGAGGTATTaGGTGTCTGCAGCTCAGAAACACAGTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: EKPCQAPVSRRY*VSAAQKHSSRS
Trigger: ACTCCTTGAACTGTGTTTCTGAGCTGCAGACACCAAATACCTCCTGGATACAGGTGCCTGGCATGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGCCATGGCGGCATAGGTaGTATGGATTGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERPWRHR*YGLGGR
Trigger: TCTTCCTCCCAATCCATATCACCTATGCCGCCATGG...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAAGCCAGGACCCAGATaGCCATGCAGGCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKKPGPR*PCRPCK
Trigger: CTTACATGGCCTGCATGGTCATCTGGGTCCTGGCTT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGGGGTCCATTTGGGAGTaGGTGGGCCACGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRGSIWE*VGHEED
Trigger: GTCTTCCTCGTGGCCCACTCACTCCCAAATGGACCC...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGCTTCACTTAGAGCATTaGCCAGGCGAGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQLHLEH*PGERRG
Trigger: CCCTCTTCTCTCGCCTGGTCAATGCTCTAAGTGAAG...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTTTAACACAGAGCAGTaGCTTGAAGGTAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGFNTEQ*LEGRVF
Trigger: GAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAATGGAGTTCATGGGCTaGTATGTCACCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEMEFMG*YVTFLS
Trigger: GGAGAGGAAGGTGACATATCAGCCCATGAACTCCAT...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCTCTGTCTTCCTAGCTaGTCCGAAAGCCAAATTCAT +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHLCLPS*SESQIH
Trigger: ATGAATTTGGCTTTCGGATCAGCTAGGAAGACAGAG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGTTGAGCCAGGCAAACTaGAGTTCAAATCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMLSQAN*SSNPSS
Trigger: GGAGCTTGGATTTGAACTTCAGTTTGCCTGGCTCAA...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACTTGAGCCAGGCAAACTaGAGTTCAAATCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHLSQAN*SSNPSS
Trigger: GGAGCTTGGATTTGAACTTCAGTTTGCCTGGCTCAA...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGGGAAAACAGCCGGTTTaGATTGTGCTCCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGGKQPV*IVLLFI
Trigger: GATAAACAGGAGCACAATTCAAACCGGCTGTTTTCC...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATGGAAAACAGCCGGTTTaGATTGTGCTCCTGTTTATC +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDGKQPV*IVLLFI
Trigger: GATAAACAGGAGCACAATTCAAACCGGCTGTTTTCC...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGATGGAGATGTTCACATaGAGCTGTGGGGACAAGACT +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMMEMFT*SCGDKT
Trigger: AGTCTTGTCCCCACAGCTTCATGTGAACATCTCCAT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGATGGAGATGTTCACATaGAGCTGTGGGGACAAGACT +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLMEMFT*SCGDKT
Trigger: AGTCTTGTCCCCACAGCTTCATGTGAACATCTCCAT...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACTTCAGTGTTTGTGCCTaGACCATCGTAGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHFSVCA*TIVGAS
Trigger: TGAAGCACCTACGATGGTTCAGGCACAAACACTGAA...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGTTCAGTGTTTGTGCCTaGACCATCGTAGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLFSVCA*TIVGAS
Trigger: TGAAGCACCTACGATGGTTCAGGCACAAACACTGAA...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGAGCTGGAGATGGTTCTaGAATCAAATTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQSWRWF*NQIPPT
Trigger: AGTGGGAGGAATTTGATTTCAGAACCATCTCCAGCT...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTACAGCTAGAAACACCTaGTTACCCAAAAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFTARNT*LPKSKD
Trigger: ATCTTTGCTTTTGGGTAATCAGGTGTTTCTAGCTGT...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412676.5
CDS-3UTR TCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTTATTTCTCCTCCCCTTaGATCTGCACTGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAYFSSP*ICTGMV
Trigger: CACCATGCCAGTGCAGATTCAAGGGGAGGAGAAATA...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550402.6
CDS-3UTR GCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATGTTGAACAGGAAATCTaGCACTGCCAGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHVEQEI*HCQVEE
Trigger: TTCCTCAACCTGGCAGTGGCAGATTTCCTGTTCAAC...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACGTTGAACAGGAAATCTaGCACTGCCAGGTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHVEQEI*HCQVEE
Trigger: TTCCTCAACCTGGCAGTGGCAGATTTCCTGTTCAAC...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACACAGAATGGGGTTCATaGAGCTGTTGGCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHTEWGS*SCWQWQ
Trigger: TTGCCATTGCCAACAGCTGCATGAACCCCATTCTGT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCGTGAGGATCAAAGCATaGCGGTCTCCCTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFVRIKA*RSPSHS
Trigger: TGAATGAGAGGGAGACCGGCATGCTTTGATCCTCAC...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAGTGAGGATCAAAGCATaGCGGTCTCCCTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEVRIKA*RSPSHS
Trigger: TGAATGAGAGGGAGACCGGCATGCTTTGATCCTCAC...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGGCGCGGGGTAGACATTaGATCTGTTCATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMARGRH*ICSLHL
Trigger: AAGATGCAATGAACAGATGCAATGTCTACCCCGCGC...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGCGCGGGGTAGACATTaGATCTGTTCATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLARGRH*ICSLHL
Trigger: AAGATGCAATGAACAGATGCAATGTCTACCCCGCGC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGGCACACTTTGCACACTaGAGGGACGATATATGCATG +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMAHFAH*RDDICM
Trigger: CATGCATATATCGTCCCTGCAGTGTGCAAAGTGTGC...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACACTAAGTATGTTGGTTaGCTGTGCAGCAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNTKYVG*LCSSAG
Trigger: ACCTGCACTGCTGCACAGGCAACCAACATACTTAGT...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCTGAACCATCGTAGGTaGTTCATGAATGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNLNHRR*FMNARS
Trigger: GGATCTGGCATTCATGAAGCACCTACGATGGTTCAG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGCCTCCAAAACCACAATaGAGTCTAAATAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQPPKPQ*SLNNQG
Trigger: ACCCTGATTATTTAGACTCCATTGTGGTTTTGGAGG...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGAGATCCTGGTCACCCTaGCTTCCAAGGGGGATAAGT +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERRSWSP*LPRGIS
Trigger: ACTTATCCCCCTTGGAAGCCAGGGTGACCAGGATCT...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACATAGGTGATATGGATTaGGAGGAAGACGTTGAACAG +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHIGDMD*EEDVEQ
Trigger: CTGTTCAACGTCTTCCTCCCAATCCATATCACCTAT...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATCTGGTGAACATGTTGTaGATGAGAAGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHLVNML*MRRKLL
Trigger: CAGCAACTTCCTTCTCATCCACAACATGTTCACCAG...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGTTTTCCCATGCAGGTTaGCTGTGTCCCGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERFSHAG*LCPGRR
Trigger: TCGTCTTCCGGGACACAGCCAACCTGCATGGGAAAA...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCGAAAGCCAAATTCATaGCCTATGGAGTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLRKPNS*PMEFMG
Trigger: GCCCATGAACTCCATAGGCCATGAATTTGGCTTTCG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCGAAAGCCAAATTCATaGCCTATGGAGTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNRKPNS*PMEFMG
Trigger: GCCCATGAACTCCATAGGCCATGAATTTGGCTTTCG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGGAAGAGAACAGAATGTaGACACTTAGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQEENRM*TLRSQR
Trigger: CCTTTGGCTCCTAAGTGTCCACATTCTGTTCTCTTC...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATGAAGAGAACAGAATGTaGACACTTAGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDEENRM*TLRSQR
Trigger: CCTTTGGCTCCTAAGTGTCCACATTCTGTTCTCTTC...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCGACAACATGAATTCCTaGCTCCCCCATCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSDNMNS*LPHPGL
Trigger: CAGGCCAGGATGGGGGAGCCAGGAATTCATGTTGTC...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCCTCATCTGTGAAATaGGAGACATCTGGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSPSSVK*ETSGQD
Trigger: ATCTTGCCCAGATGTCTCCCATTTCACAGATGAGGG...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGATTCATCACCGTAACTaGTGGAAGTGTTGTAATCTT +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQIHHRN*WKCCNL
Trigger: AAGATTACAACACTTCCATCAGTTACGGTGATGAAT...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCACCATGGCGGCATAGGTaGTATGGATTGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPPWRHR*YGLGGR
Trigger: TCTTCCTCCCAATCCATATCACCTATGCCGCCATGG...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCAACTTCTTGAAGTCCTaGCCCATGAAAACATACAGA +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPNFLKS*PMKTYR
Trigger: TCTGTATGTTTTCATGGGTCAGGACTTCAAGAAGTT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCACTTCACTTAGAGCATTaGCCAGGCGAGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPLHLEH*PGERRG
Trigger: CCCTCTTCTCTCGCCTGGTCAATGCTCTAAGTGAAG...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGCTTCACTTAGAGCATTaGCCAGGCGAGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKLHLEH*PGERRG
Trigger: CCCTCTTCTCTCGCCTGGTCAATGCTCTAAGTGAAG...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATAAGAGGTTCTTGCCTTaGTCTTCAGAAGACATATCC +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDKRFLP*SSEDIS
Trigger: GGATATGTCTTCTGAAGATCAAGGCAAGAACCTCTT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTTAACACAGAGCAGTaGCTTGAAGGTAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGFNTEQ*LEGRVF
Trigger: GAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAA...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCTCTGTCTTCCTAGCTaGTCCGAAAGCCAAATTCAT +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNLCLPS*SESQIH
Trigger: ATGAATTTGGCTTTCGGATCAGCTAGGAAGACAGAG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAATTGAGCCAGGCAAACTaGAGTTCAAATCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMELSQAN*SSNPSS
Trigger: GGAGCTTGGATTTGAACTTCAGTTTGCCTGGCTCAA...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTTCTCTTAATGAAGTGTaGTTCCAAACAGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSSLNEV*FQTAHG
Trigger: GCCATGGGCTGTTTGGAATCACACTTCATTAAGAGA...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGCTGCATTTAAGTACTTaGCAGGAACCTAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGLHLST*QEPKSE
Trigger: TTCTGACTTAGGTTCCTGTCAAGTACTTAAATGCAG...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGCTGCCAGGGCCAATTTaGGGTTTCAGTGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKLPGPI*GFSVCA
Trigger: GGCACAAACACTGAAACCTCAAATTGGCCCTGGCAG...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCTAGCTGTGCAACTCTaGACTAGTGAAGTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSLAVQL*TSEVCS
Trigger: AGAACAGACTTCACTAGTTCAGAGTTGCACAGCTAG...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGGGGCATTCAGGCAGCTaGCCTGATTCAAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRGHSGS*PDSKPS
Trigger: GCTGGGCTTTGAATCAGGTCAGCTGCCTGAATGCCC...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACAGCTGGAGATGGTTCTaGAATCAAATTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHSWRWF*NQIPPT
Trigger: AGTGGGAGGAATTTGATTTCAGAACCATCTCCAGCT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGTATTTCTCCTCCCCTTaGATCTGCACTGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQYFSSP*ICTGMV
Trigger: CACCATGCCAGTGCAGATTCAAGGGGAGGAGAAATA...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCTTCCCTCTGGTCTCTaGCCGGAAGGTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRLPSGL*PEGLPE
Trigger: CTCAGGAAGACCTTCCGGGCAGAGACCAGAGGGAAG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCACAGAATGGGGTTCATaGAGCTGTTGGCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFTEWGS*SCWQWQ
Trigger: TTGCCATTGCCAACAGCTGCATGAACCCCATTCTGT...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAACAGAATGGGGTTCATaGAGCTGTTGGCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMETEWGS*SCWQWQ
Trigger: TTGCCATTGCCAACAGCTGCATGAACCCCATTCTGT...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGTGAGGATCAAAGCATaGCGGTCTCCCTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQVRIKA*RSPSHS
Trigger: TGAATGAGAGGGAGACCGGCATGCTTTGATCCTCAC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTCATCCCATGCAAAATaGAGTGAAAATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHSSHAK*SENWWM
Trigger: CATCCACCAATTTTCACTGCATTTTGCATGGGATGA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGTTTCCTTCATCATCATaGTCTGGGACCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLFPSSS*SGTFLS
Trigger: GGACAGAAAGGTCCCAGAGCATGATGATGAAGGAAA...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAAGGTTTCAGTGTTTGTaGCTGAACCATCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMERFQCL*LNHRRC
Trigger: GCACCTACGATGGTTCAGGCACAAACACTGAAACCT...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCCCTCCAAAACCACAATaGAGTCTAAATAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPPPKPQ*SLNNQG
Trigger: ACCCTGATTATTTAGACTCCATTGTGGTTTTGGAGG...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAGATCCTGGTCACCCTaGCTTCCAAGGGGGATAAGT +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKRSWSP*LPRGIS
Trigger: ACTTATCCCCCTTGGAAGCCAGGGTGACCAGGATCT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCTGGTGAACATGTTGTaGATGAGAAGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMLVNML*MRRKLL
Trigger: CAGCAACTTCCTTCTCATCCACAACATGTTCACCAG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACCTGGTGAACATGTTGTaGATGAGAAGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHLVNML*MRRKLL
Trigger: CAGCAACTTCCTTCTCATCCACAACATGTTCACCAG...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCTGGTGAACATGTTGTaGATGAGAAGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHLVNML*MRRKLL
Trigger: CAGCAACTTCCTTCTCATCCACAACATGTTCACCAG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGTTTTCCCATGCAGGTTaGCTGTGTCCCGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKFSHAG*LCPGRR
Trigger: TCGTCTTCCGGGACACAGCCAACCTGCATGGGAAAA...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTAAATGCAGTGAAAATTaGTGGATGCTAAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFKCSEN*WMLKRF
Trigger: GAACCTCTTTAGCATCCACCAATTTTCACTGCATTT...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACGAAAGCCAAATTCATaGCCTATGGAGTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMERKPNS*PMEFMG
Trigger: GCCCATGAACTCCATAGGCCATGAATTTGGCTTTCG...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTGTTACTTTCCCCATCTaGGCCTCAGCTATGTCATTT +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSVTFPI*ASAMSF
Trigger: AAATGACATAGCTGAGGCCCAGATGGGGAAAGTAAC...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGAAGAGAACAGAATGTaGACACTTAGGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLEENRM*TLRSQR
Trigger: CCTTTGGCTCCTAAGTGTCCACATTCTGTTCTCTTC...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACAACAATGAAGGGACTTaGAAGAGAACAGAATGTGGA +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHNNEGT*KRTECG
Trigger: TCCACATTCTGTTCTCTTCCAAGTCCCTTCATTGTT...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTATATGCATGACCCATaGAGATGTTCACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: EDISLGVPGLRESIEGFHYMHDP*RCSHEA
Trigger: AGCTTCATGTGAACATCTCCATGGGTCATGCATATA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTCTCCCTGTCCTTGCTaGCTCAAGGGTCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRSPCPC*LKGQLE
Trigger: CTCCAGCTGACCCTTGAGCCAGCAAGGACAGGGAGA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGTTTGAAGGTCCCTTATaGTTTTCACGATTGGATTCT +
Preference number: 4 (lower is better)
Translates to: PERRLWALSMLVACAAVQFEGPL*FSRLDS
Trigger: AGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCATTCATCACCGTAACTaGTGGAAGTGTTGTAATCTT +
Preference number: 4 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPIHHRN*WKCCNL
Trigger: AAGATTACAACACTTCCATCAGTTACGGTGATGAAT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGATTCATCACCGTAACTaGTGGAAGTGTTGTAATCTT +
Preference number: 4 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGIHHRN*WKCCNL
Trigger: AAGATTACAACACTTCCATCAGTTACGGTGATGAAT...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCTGCCACTGCCAGGTTaGGGAACCAGACCATGTTCA +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRLPLPG*GTRPCS
Trigger: TGAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGAAGAGGTTCTTGCCTTaGTCTTCAGAAGACATATCC +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMKRFLP*SSEDIS
Trigger: GGATATGTCTTCTGAAGATCAAGGCAAGAACCTCTT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCCATGCAAAATGCAGTaGAAATTGGTGGATGCTAAA +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQPCKMQ*KLVDAK
Trigger: TTTAGCATCCACCAATTTTCACTGCATTTTGCATGG...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACTTTAACACAGAGCAGTaGCTTGAAGGTAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHFNTEQ*LEGRVF
Trigger: GAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAA...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTGCGATGTTCTAGGGTaGGCTGCTCCATGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRCDVLG*AAPCLH
Trigger: ATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCTGCATTTAAGTACTTaGCAGGAACCTAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQLHLST*QEPKSE
Trigger: TTCTGACTTAGGTTCCTGTCAAGTACTTAAATGCAG...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGTTTCCTCACCCCTTCTaGACCTTGCTGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKFPHPF*TLLPES
Trigger: AGATTCTGGCAGCAAGGTTCAGAAGGGGTGAGGAAA...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATTCATCCCATGCAAAATaGAGTGAAAATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHSSHAK*SENWWM
Trigger: CATCCACCAATTTTCACTGCATTTTGCATGGGATGA...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATGGATCAATTCAGAGCTaGCTTGTCATAAGCATTAAG +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHGSIQS*LVISIK
Trigger: CTTAATGCTTATGACAAGGCAGCTCTGAATTGATCC...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGAGCCGGTTTGAATTGTaGTCCTGTTTATCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGSRFEL*SCLSAF
Trigger: AAAAGCTGATAAACAGGAGCACAATTCAAACCGGCT...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCCTGCCAGAATCTCTGTaGCTCTTCTCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSLPESL*LFSGEG
Trigger: TCCTTCTCCAGAGAAGAGGCACAGAGATTCTGGCAG...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCACTGCCAGAATCTCTGTaGCTCTTCTCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPLPESL*LFSGEG
Trigger: TCCTTCTCCAGAGAAGAGGCACAGAGATTCTGGCAG...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAAATCCAAGCAGTTCTaGTGGAGAGATGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKKSKQF*WRDGLP
Trigger: GGGAAGCCCATCTCTCCAGCAGAACTGCTTGGATTT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGAGACTTGCACACCCTaGCTTCTTTCTGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKETCTP*LLSANH
Trigger: GTGATTGGCAGAAAGAAGCCAGGGTGTGCAAGTCTC...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAAGGGCTTCTTGGTCTTaGCCAGGCGGTTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNERASWS*PGGCAA
Trigger: TGCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCT...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGTGCAGTGAAAATTGGTaGATGCTAAAGAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQCSENW*MLKRFL
Trigger: CAAGAACCTCTTTAGCATCCACCAATTTTCACTGCA...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGACCAGGAATGGACCTTaGAGAGTGTCATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKTRNGP*RVSFLG
Trigger: CCCCAGAAATGACACTCTCCAAGGTCCATTCCTGGT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTGAAGGTAGGGTTTTCTaGCCAGCTACTGATAATATA +
Preference number: 4 (lower is better)
Translates to: TLSQVTESSDILFFPGDSEGRVF*PATDNI
Trigger: TATATTATCAGTAGCTGGCCAGAAAACCCTACCTTC...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAGGCCTATGGAGTTCATaGGCTGATATGTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPGLWSS*ADMSPS
Trigger: GGAAGGTGACATATCAGCCCATGAACTCCATAGGCC...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAATATCCAGGAGGTATTTaGTGTCTGCAGCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEYPGGI*CLQLRN
Trigger: GTTTCTGAGCTGCAGACACCAAATACCTCCTGGATA...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATTATGTCATTTGTAAATaGGGCTATGACACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHYVICK*GYDTLW
Trigger: CCACAGAGTGTCATAGCCCCATTTACAAATGACATA...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTTTCATTGCATCTTGTTaGAGAATCAGCTTAACAATG +
Preference number: 4 (lower is better)
Translates to: STISLRCSRVSCSMPASFFIASC*RISLTM
Trigger: CATTGTTAAGCTGATTCTCCAACAAGATGCAATGAA...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGTTCATCATCATGCTCTaGGACCTTTCTGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERFIIML*DLSVPS
Trigger: AGAGGGGACAGAAAGGTCCCAGAGCATGATGATGAA...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGTATGGTTTTCACGATTaGATTCTATCTTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQYGFHD*ILSSPT
Trigger: GGTGGGAGAAGATAGAATCCAATCGTGAAAACCATA...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGGTTCTGCTGGAGAGATaGGCTTCCCTCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRVLLER*ASLWSL
Trigger: CAGAGACCAGAGGGAAGCCCATCTCTCCAGCAGAAC...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
3UTR CAA 72 bp CAAGATGAGTTTGAAGGTCCCTTATGGTTTTCACGATaGGATTCTATCTTCTCCCACCCATCCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QDEFEGPLWFSR*DSIFSHPSRLP
Trigger: TGGGAGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAACTCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTAACTTCTTGAAGTCCTaGCCCATGAAAACATACAGA +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSNFLKS*PMKTYR
Trigger: TCTGTATGTTTTCATGGGTCAGGACTTCAAGAAGTT...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAAAGAGGTTCTTGCCTTaGTCTTCAGAAGACATATCC +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEKRFLP*SSEDIS
Trigger: GGATATGTCTTCTGAAGATCAAGGCAAGAACCTCTT...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCCATGCAAAATGCAGTaGAAATTGGTGGATGCTAAA +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLPCKMQ*KLVDAK
Trigger: TTTAGCATCCACCAATTTTCACTGCATTTTGCATGG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCCATGCAAAATGCAGTaGAAATTGGTGGATGCTAAA +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHPCKMQ*KLVDAK
Trigger: TTTAGCATCCACCAATTTTCACTGCATTTTGCATGG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAACACTGGGTTTGCTCTaGCCCCCTCACTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNETLGLL*PPHCSH
Trigger: GTGTGAGCAGTGAGGGGGTCAGAGCAAACCCAGTGT...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGGCTGTTAATGGCTGTTaGGGGAGCTGGAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRAVNGC*GSWKPS
Trigger: ACTTGGCTTCCAGCTCCCTCAACAGCCATTAACAGC...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGTCTCTTAATGAAGTGTaGTTCCAAACAGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQSLNEV*FQTAHG
Trigger: GCCATGGGCTGTTTGGAATCACACTTCATTAAGAGA...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCTGCATTTAAGTACTTaGCAGGAACCTAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLLHLST*QEPKSE
Trigger: TTCTGACTTAGGTTCCTGTCAAGTACTTAAATGCAG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGTTCAGTGTTTGTGCCTaGACCATCGTAGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKFSVCA*TIVGAS
Trigger: TGAAGCACCTACGATGGTTCAGGCACAAACACTGAA...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGCTAGCTGTGCAACTCTaGACTAGTGAAGTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQLAVQL*TSEVCS
Trigger: AGAACAGACTTCACTAGTTCAGAGTTGCACAGCTAG...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTCTCCTTCCAAGGGCTaGAGAAGTTGGGCATTCAGG +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRSPSKG*RSWAFR
Trigger: CCTGAATGCCCAACTTCTTCAGCCCTTGGAAGGAGA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAAGGGTTCCCTGTGACTaGAGGCCACTCGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNERVPCD*RPLEAV
Trigger: AACAGCCTCGAGTGGCCTGCAGTCACAGGGAACCCT...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR GCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACTTCCCTCTGGTCTCTaGCCGGAAGGTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNELPSGL*PEGLPE
Trigger: CTCAGGAAGACCTTCCGGGCAGAGACCAGAGGGAAG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCGAGCTGGAAGCCAAGTaGATTTTCTCTGCCATGTTG +
Preference number: 4 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSELEAK*IFSAML
Trigger: CAACATGGCAGAGAAAATGCACTTGGCTTCCAGCTC...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATATTGCATCTGTTCATTaGATCTTGTTGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDIASVH*ILLENQ
Trigger: CTGATTCTCCAACAAGATGCAATGAACAGATGCAAT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTAGCCGGTTTGAATTGTaGTCCTGTTTATCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSSRFEL*SCLSAF
Trigger: AAAAGCTGATAAACAGGAGCACAATTCAAACCGGCT...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCACTAAGTATGTTGGTTaGCTGTGCAGCAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSTKYVG*LCSSAG
Trigger: ACCTGCACTGCTGCACAGGCAACCAACATACTTAGT...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAAGGTTTCAGTGTTTGTaGCTGAACCATCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPRFQCL*LNHRRC
Trigger: GCACCTACGATGGTTCAGGCACAAACACTGAAACCT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTGTGATGATGAGGACTaGGACCAGGAAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRCDDED*DQEATE
Trigger: CTCTGTGGCTTCCTGGTCCCAGTCCTCATCATCACA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGTGCAGTGAAAATTGGTaGATGCTAAAGAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMCSENW*MLKRFL
Trigger: CAAGAACCTCTTTAGCATCCACCAATTTTCACTGCA...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTTGCAGTGAAAATTGGTaGATGCTAAAGAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSCSENW*MLKRFL
Trigger: CAAGAACCTCTTTAGCATCCACCAATTTTCACTGCA...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGAAATGCAGTGAAAATTaGTGGATGCTAAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQKCSEN*WMLKRF
Trigger: GAACCTCTTTAGCATCCACCAATTTTCACTGCATTT...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAAATTCATGGCCTATaGAGTTCATGGGCTGATATG +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFQIHGL*SSWADM
Trigger: CATATCAGCCCATGAACTCCATAGGCCATGAATTTG...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGAACAATGAAGGGACTTaGAAGAGAACAGAATGTGGA +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLNNEGT*KRTECG
Trigger: TCCACATTCTGTTCTCTTCCAAGTCCCTTCATTGTT...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTGGGAAGAGGGGAGATaGGGGCCACTGAGCAATATT +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRWEEGR*GPLSNI
Trigger: AATATTGCTCAGTGGCCCCCATCTCCCCTCTTCCCA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGGGGACAAGACTGTATaGGATGTTAAGGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQGDKTV*DVKAAF
Trigger: AAATGCAGCCTTAACATCCCATACAGTCTTGTCCCC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATTCATCATCATGCTCTaGGACCTTTCTGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPFIIML*DLSVPS
Trigger: AGAGGGGACAGAAAGGTCCCAGAGCATGATGATGAA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACTATGGTTTTCACGATTaGATTCTATCTTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNYGFHD*ILSSPT
Trigger: GGTGGGAGAAGATAGAATCCAATCGTGAAAACCATA...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTCCAAGCAGTTCTGCTaGAGAGATGGGCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRSKQFC*RDGLPS
Trigger: AGAGGGAAGCCCATCTCTCCAGCAGAACTGCTTGGA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
3UTR CAA 72 bp CGCGGGGTAGACATTGCATCTGTTCATTGCATCTTGTaGGAGAATCAGCTTAACAATGAAGGGACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGVDIASVHCIL*ENQLNNEGTWK
Trigger: CTTCCAAGTCCCTTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTACCCCGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAGCTGGAGATGGTTCTaGAATCAAATTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKSWRWF*NQIPPT
Trigger: AGTGGGAGGAATTTGATTTCAGAACCATCTCCAGCT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGATCCCTCACTTGTCTTaGCCTTGCAAAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRIPHLS*PCKEPT
Trigger: TGTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGAT...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATATTGCATCTGTTCATTaGATCTTGTTGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: ALIFRRHILGCPWVERVHIASVH*ILLENQ
Trigger: CTGATTCTCCAACAAGATGCAATGAACAGATGCAAT...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTGGATCAATTCAGAGCTaGCTTGTCATAAGCATTAAG +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAGSIQS*LVISIK
Trigger: CTTAATGCTTATGACAAGGCAGCTCTGAATTGATCC...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCTGCCAGAATCTCTGTaGCTCTTCTCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRLPESL*LFSGEG
Trigger: TCCTTCTCCAGAGAAGAGGCACAGAGATTCTGGCAG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGATAGGTGATATGGATTaGGAGGAAGACGTTGAACAG +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERIGDMD*EEDVEQ
Trigger: CTGTTCAACGTCTTCCTCCCAATCCATATCACCTAT...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGAAATGCAGTGAAAATTaGTGGATGCTAAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLKCSEN*WMLKRF
Trigger: GAACCTCTTTAGCATCCACCAATTTTCACTGCATTT...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGACCAGGAATGGACCTTaGAGAGTGTCATTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRTRNGP*RVSFLG
Trigger: CCCCAGAAATGACACTCTCCAAGGTCCATTCCTGGT...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATATCCAGGAGGTATTTaGTGTCTGCAGCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPYPGGI*CLQLRN
Trigger: GTTTCTGAGCTGCAGACACCAAATACCTCCTGGATA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTTATGTCATTTGTAAATaGGGCTATGACACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAYVICK*GYDTLW
Trigger: CCACAGAGTGTCATAGCCCCATTTACAAATGACATA...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAGTTACTTTCCCCATCTaGGCCTCAGCTATGTCATTT +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPVTFPI*ASAMSF
Trigger: AAATGACATAGCTGAGGCCCAGATGGGGAAAGTAAC...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCAACAATGAAGGGACTTaGAAGAGAACAGAATGTGGA +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFNNEGT*KRTECG
Trigger: TCCACATTCTGTTCTCTTCCAAGTCCCTTCATTGTT...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCATTGCATCTTGTTaGAGAATCAGCTTAACAATG +
Preference number: 4 (lower is better)
Translates to: SSEDISLGVPGLRESIEGFIASC*RISLTM
Trigger: CATTGTTAAGCTGATTCTCCAACAAGATGCAATGAA...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCTATATGCATGACCCATaGAGATGTTCACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFYMHDP*RCSHEA
Trigger: AGCTTCATGTGAACATCTCCATGGGTCATGCATATA...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAATATATGCATGACCCATaGAGATGTTCACATGAAGCT +
Preference number: 4 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEYMHDP*RCSHEA
Trigger: AGCTTCATGTGAACATCTCCATGGGTCATGCATATA...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCATTCATCACCGTAACTaGTGGAAGTGTTGTAATCTT +
Preference number: 4 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFIHHRN*WKCCNL
Trigger: AAGATTACAACACTTCCATCAGTTACGGTGATGAAT...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGAACTTCTTGAAGTCCTaGCCCATGAAAACATACAGA +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQNFLKS*PMKTYR
Trigger: TCTGTATGTTTTCATGGGTCAGGACTTCAAGAAGTT...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR TCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACTTCACTTAGAGCATTaGCCAGGCGAGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNELHLEH*PGERRG
Trigger: CCCTCTTCTCTCGCCTGGTCAATGCTCTAAGTGAAG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAAGAGGTTCTTGCCTTaGTCTTCAGAAGACATATCC +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKKRFLP*SSEDIS
Trigger: GGATATGTCTTCTGAAGATCAAGGCAAGAACCTCTT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACAGGAAATCTGCCACTaGCAGGTTGAGGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNEQEICH*QVEEPD
Trigger: GTCTGGTTCCTCAACCTGGCAGTGGCAGATTTCCTG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAGGGCCAAGTGTGATCTaGATCACACTGGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNEGPSVI*ITLGLL
Trigger: GAGCAAACCCAGTGTGATGCAGATCACACTTGGCCC...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGGTTGCTTCCCAAAGCTaGATTTTGGACCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRVASQS*ILDLSP
Trigger: TGGAGACAGGTCCAAAATGCAGCTTTGGGAAGCAAC...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGGCGCGGGGTAGACATTaGATCTGTTCATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRARGRH*ICSLHL
Trigger: AAGATGCAATGAACAGATGCAATGTCTACCCCGCGC...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAATATGTTGGTTGCCTGTaGAGCAGTGCAGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNEYVGCL*SSAGEH
Trigger: GTGCTCACCTGCACTGCTGCACAGGCAACCAACATA...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGCCTCCAAAACCACAATaGAGTCTAAATAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQPPKPQ*SLNNQG
Trigger: ACCCTGATTATTTAGACTCCATTGTGGTTTTGGAGG...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGAAGGTAGGGTTTTCTaGCCAGCTACTGATAATATA +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEEREGRVF*PATDNI
Trigger: TATATTATCAGTAGCTGGCCAGAAAACCCTACCTTC...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCACAAATTCATGGCCTATaGAGTTCATGGGCTGATATG +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPQIHGL*SSWADM
Trigger: CATATCAGCCCATGAACTCCATAGGCCATGAATTTG...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGTTCATTGCATCTTGTTaGAGAATCAGCTTAACAATG +
Preference number: 4 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLFIASC*RISLTM
Trigger: CATTGTTAAGCTGATTCTCCAACAAGATGCAATGAA...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCCCTCATCTGTGAAATaGGAGACATCTGGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRPSSVK*ETSGQD
Trigger: ATCTTGCCCAGATGTCTCCCATTTCACAGATGAGGG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTCTCTTAATGAAGTGTaGTTCCAAACAGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRSLNEV*FQTAHG
Trigger: GCCATGGGCTGTTTGGAATCACACTTCATTAAGAGA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCTAGCTGTGCAACTCTaGACTAGTGAAGTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRLAVQL*TSEVCS
Trigger: AGAACAGACTTCACTAGTTCAGAGTTGCACAGCTAG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGCTCCCAGATCACCTATaGATTTCCACATACTTTAAC +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKLPDHL*ISTYFN
Trigger: GTTAAAGTATGTGGAAATGCATAGGTGATCTGGGAG...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAGGGACTCTCCGGAGTTaGTTCCCAAAGCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNEGTLRS*FPKLHF
Trigger: AAAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCC...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCGGATCAATTCAGAGCTaGCTTGTCATAAGCATTAAG +
Preference number: 4 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSGSIQS*LVISIK
Trigger: CTTAATGCTTATGACAAGGCAGCTCTGAATTGATCC...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTTTCCTTCATCATCATaGTCTGGGACCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRFPSSS*SGTFLS
Trigger: GGACAGAAAGGTCCCAGAGCATGATGATGAAGGAAA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGCCTCCAAAACCACAATaGAGTCTAAATAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKPPKPQ*SLNNQG
Trigger: ACCCTGATTATTTAGACTCCATTGTGGTTTTGGAGG...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAGAAGGTAGGGTTTTCTaGCCAGCTACTGATAATATA +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPEGRVF*PATDNI
Trigger: TATATTATCAGTAGCTGGCCAGAAAACCCTACCTTC...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAGGCCTATGGAGTTCATaGGCTGATATGTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNEGLWSS*ADMSPS
Trigger: GGAAGGTGACATATCAGCCCATGAACTCCATAGGCC...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACATTGCCTTGATCTCTaGAGACATAGGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNEHCLDL*RHRRWE
Trigger: CTCCCACCTCCTATGTCTCCAGAGATCAAGGCAATG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGTTTGAAGGTCCCTTATaGTTTTCACGATTGGATTCT +
Preference number: 4 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERFEGPL*FSRLDS
Trigger: AGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAATTGCATCTGTTCATTaGATCTTGTTGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPIASVH*ILLENQ
Trigger: CTGATTCTCCAACAAGATGCAATGAACAGATGCAAT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAAATGCAGTGAAAATTaGTGGATGCTAAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSKCSEN*WMLKRF
Trigger: GAACCTCTTTAGCATCCACCAATTTTCACTGCATTT...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGTTTGAAGGTCCCTTATaGTTTTCACGATTGGATTCT +
Preference number: 4 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKFEGPL*FSRLDS
Trigger: AGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR GCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTCATCCCATGCAAAATaGAGTGAAAATTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRSSHAK*SENWWM
Trigger: CATCCACCAATTTTCACTGCATTTTGCATGGGATGA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR GCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAATGCAGGGACGATATATaGATGACCCATGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNECRDDI*MTHGDV
Trigger: AACATCTCCATGGGTCATGCATATATCGTCCCTGCA...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTATGGTTTTCACGATTaGATTCTATCTTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRYGFHD*ILSSPT
Trigger: GGTGGGAGAAGATAGAATCCAATCGTGAAAACCATA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 72 bp TATGCATTTCCACATACTTTAACACAGAGCAGTGACTaGAAGGTAGGGTTTTCTGGCCAGCTACTGATAATA +
Preference number: 4 (lower is better)
Translates to: YAFPHTLTQSSD*KVGFSGQLLII
Trigger: TATTATCAGTAGCTGGCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGTTAAAGTATGTGGAAATGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
3UTR CAA 72 bp ATATTCAAACTCTTTAAAGCATTCAGAGGCTCCAGCTaGGGATCAATTCAGAGCTGCCTTGTCATAAGCATT +
Preference number: 4 (lower is better)
Translates to: IFKLFKAFRGSS*GSIQSCLVISI
Trigger: AATGCTTATGACAAGGCAGCTCTGAATTGATCCCAAGCTGGAGCCTCTGAATGCTTTAAAGAGTTTGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACAAATTCATGGCCTATaGAGTTCATGGGCTGATATG +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNEQIHGL*SSWADM
Trigger: CATATCAGCCCATGAACTCCATAGGCCATGAATTTG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR TCA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAAACTTCTTGAAGTCCTaGCCCATGAAAACATACAGA +
Preference number: 4 (lower is better)
Translates to: VDIASVHCILLENQLNNENFLKS*PMKTYR
Trigger: TCTGTATGTTTTCATGGGTCAGGACTTCAAGAAGTT...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS TCA 90 bp CTTCCCTCTGGTCTCTGCCCGGAAGGTCTTCCTGAGGGTTCCCTGTaGCTGCAGGCCACTCGAGGCTGTTGGGGAGACTTGCACACCCTG +
Preference number: 5 (lower is better)
Translates to: LPSGLCPEGLPEGSL*LQATRGCWGDLHTL
Trigger: CAGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGCCTGCAGTCACAGGGAACCCTCAGGAAGACCTTCCGGGCAGAGACCAGAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGTCTGCCACTGCCAGGTaGAGGAACCAGACCATGTTC +
Preference number: 5 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPSATAR*RNQTMF
Trigger: GAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAGA...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGGGGGACTCTCCGGAGTaGCTTCCCAAAGCTGCATTT +
Preference number: 5 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPGDSPE*LPKAAF
Trigger: AAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCCC...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS TCA 90 bp GTCACCACCATGTGCCGGCTATACCCCACAGGGTCCATTTGGGAGTaGGTGGGCCACGAGGAAGACCCAGGTGTGGACAGGCTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VTTMCRLYPTGSIWE*VGHEEDPGVDRLKL
Trigger: CAACTTCAGCCTGTCCACACCTGGGTCTTCCTCGTGGCCCACTCACTCCCAAATGGACCCTGTGGGGTATAGCCGGCACATGGTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS GCA 90 bp AGGGTTCCCTGTGACTGCAGGCCACTCGAGGCTGTTGGGGAGACTTaGACACCCTGGCTTCTTTCTGCCAATCACAGGCTCCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RVPCDCRPLEAVGET*TPWLLSANHRLLWL
Trigger: CAGCCAGAGGAGCCTGTGATTGGCAGAAAGAAGCCAGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGCCTGCAGTCACAGGGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGTCCCTCCCCATTGCCTaGATCTCTGGAGACATAGGA +
Preference number: 5 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPSLPIA*ISGDIG
Trigger: TCCTATGTCTCCAGAGATCAAGGCAATGGGGAGGGA...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGGCCACTCGAGGCTGTaGGGGAGACTTGCACACCCT +
Preference number: 5 (lower is better)
Translates to: PERRLWALSMLVACAAVQGHSRL*GRLAHP
Trigger: AGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGCC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CAA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGTCTTGGCCAGGCGGTaGCGCTGCAGTTTGCACACG +
Preference number: 5 (lower is better)
Translates to: PERRLWALSMLVACAAVQVLARR*RCSLHT
Trigger: CGTGTGCAAACTGCAGCGCAACCGCCTGGCCAAGAC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGAAGGGCTTCTTGGTCTaGGCCAGGCGGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PERRLWALSMLVACAAVQKGFLV*ARRLRC
Trigger: GCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCTT...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGGGTTCATGCAGCTGTaGGCAATGGCAAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GKGIPVLEALRVLALPFSGFMQL*AMARAV
Trigger: CACTGCCCTTGCCATTGCCAACAGCTGCATGAACCC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS CCA 90 bp TGTGACTGCAGGCCACTCGAGGCTGTTGGGGAGACTTGCACACCCTaGCTTCTTTCTGCCAATCACAGGCTCCTCTGGCTGTGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: CDCRPLEAVGETCTP*LLSANHRLLWLWLF
Trigger: AAACAGCCACAGCCAGAGGAGCCTGTGATTGGCAGAAAGAAGCCAGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGCCTGCAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGCATCCTACAAGCCAGGAGGGCCAAGGCGCTGACGACTGCTGCTGTGACCCGATTGGGAGGAAGACGTaGAACAGGAAATCTGCCACT +
Preference number: 5 (lower is better)
Translates to: QHPTSQEGQGADDCCCDPIGRKT*NRKSAT
Trigger: AGTGGCAGATTTCCTGTTCAACGTCTTCCTCCCAAT...CGGGTCACAGCAGCAGTCGTCAGCGCCTTGGCCCTCCTGGCTTGTAGGATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACAAGGGCTTCTTGGTCTaGGCCAGGCGGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: EDISLGVPGLRESIEGFHKGFLV*ARRLRC
Trigger: GCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCTT...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCCATCCCTCACTTGTCTaGCCCTTGCAAAGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: GKGIPVLEALRVLALPFSHPSLV*PLQRAH
Trigger: GTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATG...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCGGGGACTCTCCGGAGTaGCTTCCCAAAGCTGCATTT +
Preference number: 5 (lower is better)
Translates to: GKGIPVLEALRVLALPFSGDSPE*LPKAAF
Trigger: AAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCCC...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATGGCCACTCGAGGCTGTaGGGGAGACTTGCACACCCT +
Preference number: 5 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHGHSRL*GRLAHP
Trigger: AGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGCC...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTCCCCACAGGGTCCATTaGGGAGTGAGTGGGCCACGA +
Preference number: 5 (lower is better)
Translates to: TLSQVTESSDILFFPGDSPHRVH*GVSGPR
Trigger: TCGTGGCCCACTCACTCCCAAATGGACCCTGTGGGG...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGGTCTTGGCCAGGCGGTaGCGCTGCAGTTTGCACACG +
Preference number: 5 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQVLARR*RCSLHT
Trigger: CGTGTGCAAACTGCAGCGCAACCGCCTGGCCAAGAC...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTAAGGCATCCCGGTGCTaGAGGCCCTTCGTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: STISLRCSRVSCSMPASFKASRC*RPFVFL
Trigger: CAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTT...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGGAGGCAGGGCAGGAGTaGAGGAATCACCGACCACTT +
Preference number: 5 (lower is better)
Translates to: PERRLWALSMLVACAAVQEAGQE*RNHRPL
Trigger: AAGTGGTCGGTGATTCCTCAACTCCTGCCCTGCCTC...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS CCA 90 bp TCCCGAGGAAGCAGACGATGCTGTAGACCACCACCAGGAAGATCCTaGTCACCCTGGCTTCCAAGGGGGATAAGTCCTCCAAAACCACAA +
Preference number: 5 (lower is better)
Translates to: SRGSRRCCRPPPGRS*SPWLPRGISPPKPQ
Trigger: TTGTGGTTTTGGAGGACTTATCCCCCTTGGAAGCCAGGGTGACCAGGATCTTCCTGGTGGTGGTCTACAGCATCGTCTGCTTCCTCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS-3UTR CAA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCCCCACAGGGTCCATTaGGGAGTGAGTGGGCCACGA +
Preference number: 5 (lower is better)
Translates to: ALIFRRHILGCPWVERVHPHRVH*GVSGPR
Trigger: TCGTGGCCCACTCACTCCCAAATGGACCCTGTGGGG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACAAGGGCTTCTTGGTCTaGGCCAGGCGGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNKGFLV*ARRLRC
Trigger: GCAGCGCAACCGCCTGGCCAAGACCAAGAAGCCCTT...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCTCAGAAGACATATCCTaGGGTGTCCCTGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: GKGIPVLEALRVLALPFSSEDIS*GVPGLR
Trigger: TCTCAACCCAGGGACACCCAAGGATATGTCTTCTGA...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTCAAGGGCTGAAGAAGTaGGGCATTCAGGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: STISLRCSRVSCSMPASFQGLKK*GIQAAD
Trigger: GTCAGCTGCCTGAATGCCCAACTTCTTCAGCCCTTG...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCCAGGATTTGGTAACCTaGGGCCTAGGGCATCCCAGC +
Preference number: 5 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPQDLVT*GLGHPS
Trigger: GCTGGGATGCCCTAGGCCCAAGGTTACCAAATCCTG...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTGGCTGTTGGGGAGACTaGCACACCCTGGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: TLSQVTESSDILFFPGDSGCWGD*HTLASF
Trigger: GAAAGAAGCCAGGGTGTGCAAGTCTCCCCAACAGCC...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CAA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATGGCTGTTGGGGAGACTaGCACACCCTGGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHGCWGD*HTLASF
Trigger: GAAAGAAGCCAGGGTGTGCAAGTCTCCCCAACAGCC...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACCCCACAGGGTCCATTaGGGAGTGAGTGGGCCACGA +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEPHRVH*GVSGPR
Trigger: TCGTGGCCCACTCACTCCCAAATGGACCCTGTGGGG...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTGTCTTGGCCAGGCGGTaGCGCTGCAGTTTGCACACG +
Preference number: 5 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAVLARR*RCSLHT
Trigger: CGTGTGCAAACTGCAGCGCAACCGCCTGGCCAAGAC...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAGTCTTGGCCAGGCGGTaGCGCTGCAGTTTGCACACG +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEVLARR*RCSLHT
Trigger: CGTGTGCAAACTGCAGCGCAACCGCCTGGCCAAGAC...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATGGGTTCATGCAGCTGTaGGCAATGGCAAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHGFMQL*AMARAV
Trigger: CACTGCCCTTGCCATTGCCAACAGCTGCATGAACCC...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATTTGGGTGTCCCTGGGTaGAGAGAGTCCATTGAGGGG +
Preference number: 5 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHLGVPG*RESIEG
Trigger: CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAA...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGCACCAGGAATGGACCTaGGAGAGTGTCATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PERRLWALSMLVACAAVQHQEWT*ESVISG
Trigger: CCCAGAAATGACACTCTCCAAGGTCCATTCCTGGTG...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTCGTTGCATCCCTCACTaGTCTTGCCCTTGCAAAGAG +
Preference number: 5 (lower is better)
Translates to: STISLRCSRVSCSMPASFRCIPH*SCPCKE
Trigger: CTCTTTGCAAGGGCAAGACAAGTGAGGGATGCAACG...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTTGGGCACTAAGTATGTaGGTTGCCTGTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: STISLRCSRVSCSMPASFWALSM*VACAAV
Trigger: CACTGCTGCACAGGCAACCAACATACTTAGTGCCCA...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGCAAGGGCTGAAGAAGTaGGGCATTCAGGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGQGLKK*GIQAAD
Trigger: GTCAGCTGCCTGAATGCCCAACTTCTTCAGCCCTTG...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGCCCTTCTCCCTGTCCTaGCTGGCTCAAGGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMPFSLS*LAQGSA
Trigger: AGCTGACCCTTGAGCCAGCAAGGACAGGGAGAAGGG...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGCCCTTCTCCCTGTCCTaGCTGGCTCAAGGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLPFSLS*LAQGSA
Trigger: AGCTGACCCTTGAGCCAGCAAGGACAGGGAGAAGGG...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACAGACACCACCTCGTTTaGCAGAGTCCTCAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: EDISLGVPGLRESIEGFHRHHLV*QSPQGK
Trigger: CTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTCT...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCAGACACCACCTCGTTTaGCAGAGTCCTCAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPRHHLV*QSPQGK
Trigger: CTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTCT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTCAGGATTTGGTAACCTaGGGCCTAGGGCATCCCAGC +
Preference number: 5 (lower is better)
Translates to: TLSQVTESSDILFFPGDSQDLVT*GLGHPS
Trigger: GCTGGGATGCCCTAGGCCCAAGGTTACCAAATCCTG...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS GCA 90 bp CCAGGTGTGGACAGGCTGAAGTTGTTGAAGCAGGATATTTTCCCATaGAGGTTGGCTGTGTCCCGGAAGACGAGAGATGGGGAACTCAAG +
Preference number: 5 (lower is better)
Translates to: PGVDRLKLLKQDIFP*RLAVSRKTRDGELK
Trigger: CTTGAGTTCCCCATCTCTCGTCTTCCGGGACACAGCCAACCTGCATGGGAAAATATCCTGCTTCAACAACTTCAGCCTGTCCACACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS CCA 90 bp AGCAGACGATGCTGTAGACCACCACCAGGAAGATCCTGGTCACCCTaGCTTCCAAGGGGGATAAGTCCTCCAAAACCACAATGGAGTCTA +
Preference number: 5 (lower is better)
Translates to: SRRCCRPPPGRSWSP*LPRGISPPKPQWSL
Trigger: TAGACTCCATTGTGGTTTTGGAGGACTTATCCCCCTTGGAAGCCAGGGTGACCAGGATCTTCCTGGTGGTGGTCTACAGCATCGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATATTTTCCCATGCAGGTaGGCTGTGTCCCGGAAGACG +
Preference number: 5 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDIFPCR*AVSRKT
Trigger: CGTCTTCCGGGACACAGCCAACCTGCATGGGAAAAT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATATCTTGAAGGGCTTCTaGGTCTTGGCCAGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDILKGF*VLARRL
Trigger: CAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGAT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATATCTTGAAGGGCTTCTaGGTCTTGGCCAGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHILKGF*VLARRL
Trigger: CAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGAT...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACTTGGGTGTCCCTGGGTaGAGAGAGTCCATTGAGGGG +
Preference number: 5 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNLGVPG*RESIEG
Trigger: CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAA...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CCAGAGAGAAGGCTCTGGGCACTAAGTATGTTGGTTGCCTGTGCAGCAGTGCAGACACAGAGCAGTGACTaGAAGGTAGGGTTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: PERRLWALSMLVACAAVQTQSSD*KVGFSG
Trigger: GCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGT...CTGCACTGCTGCACAGGCAACCAACATACTTAGTGCCCAGAGCCTTCTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTGCAGGTGAGCACACTTaGCACACTGCAGGGACGATA +
Preference number: 5 (lower is better)
Translates to: TLSQVTESSDILFFPGDSAGEHT*HTAGTI
Trigger: TATCGTCCCTGCAGTGTGCAAAGTGTGCTCACCTGC...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTGGGCACTAAGTATGTaGGTTGCCTGTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGWALSM*VACAAV
Trigger: CACTGCTGCACAGGCAACCAACATACTTAGTGCCCA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGCACCATCAGCCTGCGATGTTCTAGGGTGAGCTGCTCCATGCCTGCATCCTTTAATTCCTCCCACTCTTaGGACTTCCATTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: STISLRCSRVSCSMPASFNSSHS*DFHSSP
Trigger: GGGAGAGGAATGGAAGTCCAAAGAGTGGGAGGAATT...AAAGGATGCAGGCATGGAGCAGCTCACCCTAGAACATCGCAGGCTGATGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGAAGGCATCCCGGTGCTaGAGGCCCTTCGTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLKASRC*RPFVFL
Trigger: CAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTT...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACGCCAATCCCCTCCCTTaGTCAGTGCCCAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNANPLP*SVPSFL
Trigger: GAGGAAACTGGGCACTGACAAAGGGAGGGGATTGGC...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATGCCAATCCCCTCCCTTaGTCAGTGCCCAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALIFRRHILGCPWVERVHANPLP*SVPSFL
Trigger: GAGGAAACTGGGCACTGACAAAGGGAGGGGATTGGC...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACGAGGCAGGGCAGGAGTaGAGGAATCACCGACCACTT +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHEAGQE*RNHRPL
Trigger: AAGTGGTCGGTGATTCCTCAACTCCTGCCCTGCCTC...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGGAGGCAGGGCAGGAGTaGAGGAATCACCGACCACTT +
Preference number: 5 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMEAGQE*RNHRPL
Trigger: AAGTGGTCGGTGATTCCTCAACTCCTGCCCTGCCTC...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTTCCAAACCCAGGATTaGGTAACCTTGGGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPFQTQD*VTLGLG
Trigger: CCCTAGGCCCAAGGTTACCAAATCCTGGGTTTGGAA...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATATGATCACCAGACCATaGCCCAGAATCCCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHMITRP*PRIPRK
Trigger: CTTCCTCGGGATTCTGGGCAATGGTCTGGTGATCAT...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACATTTTCCCATGCAGGTaGGCTGTGTCCCGGAAGACG +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHIFPCR*AVSRKT
Trigger: CGTCTTCCGGGACACAGCCAACCTGCATGGGAAAAT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACATCTTGAAGGGCTTCTaGGTCTTGGCCAGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHILKGF*VLARRL
Trigger: CAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGAT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTCACCAGGAATGGACCTaGGAGAGTGTCATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TLSQVTESSDILFFPGDSHQEWT*ESVISG
Trigger: CCCAGAAATGACACTCTCCAAGGTCCATTCCTGGTG...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACTCACTTGTCTTGCCCTaGCAAAGAGCCCACAGGACC +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHSLVLP*QRAHRT
Trigger: GGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGA...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTCCCAAAGCTGCATTTaGGACCTGTCTCCAAAGGCG +
Preference number: 5 (lower is better)
Translates to: SSEDISLGVPGLRESIEGSQSCI*DLSPKA
Trigger: CGCCTTTGGAGACAGGTCCAAAATGCAGCTTTGGGA...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTTCCCAAAGCTGCATTTaGGACCTGTCTCCAAAGGCG +
Preference number: 5 (lower is better)
Translates to: TLSQVTESSDILFFPGDSSQSCI*DLSPKA
Trigger: CGCCTTTGGAGACAGGTCCAAAATGCAGCTTTGGGA...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCAAGGGCTGAAGAAGTaGGGCATTCAGGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: ALIFRRHILGCPWVERVHQGLKK*GIQAAD
Trigger: GTCAGCTGCCTGAATGCCCAACTTCTTCAGCCCTTG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGCCCTTCTCCCTGTCCTaGCTGGCTCAAGGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERPFSLS*LAQGSA
Trigger: AGCTGACCCTTGAGCCAGCAAGGACAGGGAGAAGGG...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACCTATTTCTCCTCCCCTaGAATCTGCACTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: EDISLGVPGLRESIEGFHLFLLP*NLHWHG
Trigger: ACCATGCCAGTGCAGATTCAAGGGGAGGAGAAATAG...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS TCA 90 bp CTATTTCTCCTCCCCTTGAATCTGCACTGGCATGGTGAGTTGCTGTaGCCAACAGAAAGTGGTAGAAGTGATGCTGTGCTAGTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LFLLPLNLHWHGELL*PTESGRSDAVLVPA
Trigger: GGCTGGGACTAGCACAGCATCACTTCTACCACTTTCTGTTGGTCACAGCAACTCACCATGCCAGTGCAGATTCAAGGGGAGGAGAAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATATGATCACCAGACCATaGCCCAGAATCCCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ALIFRRHILGCPWVERVHMITRP*PRIPRK
Trigger: CTTCCTCGGGATTCTGGGCAATGGTCTGGTGATCAT...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCATTTTCCCATGCAGGTaGGCTGTGTCCCGGAAGACG +
Preference number: 5 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFIFPCR*AVSRKT
Trigger: CGTCTTCCGGGACACAGCCAACCTGCATGGGAAAAT...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCATCTTGAAGGGCTTCTaGGTCTTGGCCAGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFILKGF*VLARRL
Trigger: CAACCGCCTGGCCAAGACCAAGAAGCCCTTCAAGAT...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGGGTTCATGCAGCTGTaGGCAATGGCAAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQGFMQL*AMARAV
Trigger: CACTGCCCTTGCCATTGCCAACAGCTGCATGAACCC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGTTGGGTGTCCCTGGGTaGAGAGAGTCCATTGAGGGG +
Preference number: 5 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERLGVPG*RESIEG
Trigger: CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAA...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTCAGAAGACATATCCTaGGGTGTCCCTGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: SSEDISLGVPGLRESIEGSEDIS*GVPGLR
Trigger: TCTCAACCCAGGGACACCCAAGGATATGTCTTCTGA...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATACACAGAGCAGTGACTaGAAGGTAGGGTTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHTQSSD*KVGFSG
Trigger: GCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGT...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCAATCTCAAGTCCTCGTaGCATCCCTCACTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPNLKSS*HPSLVL
Trigger: CAAGACAAGTGAGGGATGCAACGAGGACTTGAGATT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGTCCCAAAGCTGCATTTaGGACCTGTCTCCAAAGGCG +
Preference number: 5 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMSQSCI*DLSPKA
Trigger: CGCCTTTGGAGACAGGTCCAAAATGCAGCTTTGGGA...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCAAAGGCATCCCGGTGCTTGAGGCCCTTCGTGTTCTTGCTCTTCCCTTCTCCTCTGTTCATTGCATCTaGTTGGAGAATCAGCTTAAC +
Preference number: 5 (lower is better)
Translates to: GKGIPVLEALRVLALPFSSVHCI*LENQLN
Trigger: GTTAAGCTGATTCTCCAACAAGATGCAATGAACAGA...GGAGAAGGGAAGAGCAAGAACACGAAGGGCCTCAAGCACCGGGATGCCTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACTTCAGAGGCTCCAGCTaGGGATCAATTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHFRGSS*GSIQSC
Trigger: GCAGCTCTGAATTGATCCCAAGCTGGAGCCTCTGAA...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTTCTGCCAGGGCCAATTaGAGGTTTCAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: TLSQVTESSDILFFPGDSSARAN*RFQCLC
Trigger: GCACAAACACTGAAACCTCAAATTGGCCCTGGCAGA...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACTCTGTCTCAAGTGACTGAGTCCTCGGACATACTCTTCTTCCCAGGGGACTCTAATTCCTCCCACTCTTaGGACTTCCATTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: TLSQVTESSDILFFPGDSNSSHS*DFHSSP
Trigger: GGGAGAGGAATGGAAGTCCAAAGAGTGGGAGGAATT...AGAGTCCCCTGGGAAGAAGAGTATGTCCGAGGACTCAGTCACTTGAGACAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATACTCTGGGGTCGAATTaGAGCCAATCCCCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: ALIFRRHILGCPWVERVHTLGSN*SQSPPF
Trigger: AAAGGGAGGGGATTGGCTCAAATTCGACCCCAGAGT...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACACTCTGGGGTCGAATTaGAGCCAATCCCCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHTLGSN*SQSPPF
Trigger: AAAGGGAGGGGATTGGCTCAAATTCGACCCCAGAGT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS TCA 90 bp TCTTGCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTaGGAGAGTCCATTGAGGGGTTCCACAGTGAGGATCAAAGCATGC +
Preference number: 5 (lower is better)
Translates to: SCLDLQKTYPWVSLG*ESPLRGSTVRIKAC
Trigger: GCATGCTTTGATCCTCACTGTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGGGCCACTCGAGGCTGTaGGGGAGACTTGCACACCCT +
Preference number: 5 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRGHSRL*GRLAHP
Trigger: AGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGCC...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp ACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTCCTCAGGGTCATTCACCGTTATGTaGTCTGCAGCTCTCCAATGT +
Preference number: 5 (lower is better)
Translates to: TDHFHPNQTPPRFAESSGSFTVM*SAALQC
Trigger: ACATTGGAGAGCTGCAGACAACATAACGGTGAATGA...CCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGTCTGCCACTGCCAGGTaGAGGAACCAGACCATGTTC +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQSATAR*RNQTMF
Trigger: GAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAGA...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTAGGAAGTTGCTGATCTaGCACATGGCTGTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSRKLLI*HMAVPK
Trigger: TTTCGGGACAGCCATGTGCAAGATCAGCAACTTCCT...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACAGGAAGTTGCTGATCTaGCACATGGCTGTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHRKLLI*HMAVPK
Trigger: TTTCGGGACAGCCATGTGCAAGATCAGCAACTTCCT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGTGGATGAGAAGGAAGTaGCTGATCTTGCACATGGCT +
Preference number: 5 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQWMRRK*LILHMA
Trigger: AGCCATGTGCAAGATCAGCAACTTCCTTCTCATCCA...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATACGCTGGTGAACATGTaGTGGATGAGAAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDTLVNM*WMRRKL
Trigger: CAACTTCCTTCTCATCCACAACATGTTCACCAGCGT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGACGCTGGTGAACATGTaGTGGATGAGAAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SSEDISLGVPGLRESIEGTLVNM*WMRRKL
Trigger: CAACTTCCTTCTCATCCACAACATGTTCACCAGCGT...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGATTTTCCCATGCAGGTaGGCTGTGTCCCGGAAGACG +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQIFPCR*AVSRKT
Trigger: CGTCTTCCGGGACACAGCCAACCTGCATGGGAAAAT...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCATGCAGCTGTaGGCAATGGCAAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKGFMQL*AMARAV
Trigger: CACTGCCCTTGCCATTGCCAACAGCTGCATGAACCC...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGCATCCCTCACTTGTCTaGCCCTTGCAAAGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERHPSLV*PLQRAH
Trigger: GTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATG...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCTCCCTCCCCATTGCCTaGATCTCTGGAGACATAGGA +
Preference number: 5 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFSLPIA*ISGDIG
Trigger: TCCTATGTCTCCAGAGATCAAGGCAATGGGGAGGGA...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAATTCAGAGGCTCCAGCTaGGGATCAATTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEFRGSS*GSIQSC
Trigger: GCAGCTCTGAATTGATCCCAAGCTGGAGCCTCTGAA...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACAACAGCCGGTTTGAATaGTGCTCCTGTTTATCAGCT +
Preference number: 5 (lower is better)
Translates to: EDISLGVPGLRESIEGFHNSRFE*CSCLSA
Trigger: AGCTGATAAACAGGAGCACAATTCAAACCGGCTGTT...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCGCCAATCCCCTCCCTTaGTCAGTGCCCAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSANPLP*SVPSFL
Trigger: GAGGAAACTGGGCACTGACAAAGGGAGGGGATTGGC...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCACTCTGGGGTCGAATTaGAGCCAATCCCCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SPRLYGTQHVLSTRRKGFTLGSN*SQSPPF
Trigger: AAAGGGAGGGGATTGGCTCAAATTCGACCCCAGAGT...GAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTTTCCAAACCCAGGATTaGGTAACCTTGGGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAFQTQD*VTLGLG
Trigger: CCCTAGGCCCAAGGTTACCAAATCCTGGGTTTGGAA...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACTTCTGCTATCATTGTaGCAGAGCCCTGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMELLLSL*QSPEPP
Trigger: AGGAGGCTCAGGGCTCTGCAACAATGATAGCAGAAG...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACCTATTTCTCCTCCCCTaGAATCTGCACTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNLFLLP*NLHWHG
Trigger: ACCATGCCAGTGCAGATTCAAGGGGAGGAGAAATAG...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550402.6
CDS GCA 90 bp GGCATAGGTGATATGGATTGGGAGGAAGACGTTGAACAGGAAATCTaGCACTGCCAGGTTGAGGAACCAGACCATGTTCACTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GIGDMDWEEDVEQEI*HCQVEEPDHVHCLL
Trigger: AAGAAGACAGTGAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAGATTTCCTGTTCAACGTCTTCCTCCCAATCCATATCACCTATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATTCATTCACCGTTATGTaGTCTGCAGCTCTCCAATGT +
Preference number: 5 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDSFTVM*SAALQC
Trigger: ACATTGGAGAGCTGCAGACAACATAACGGTGAATGA...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGTCATTCACCGTTATGTaGTCTGCAGCTCTCCAATGT +
Preference number: 5 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQSFTVM*SAALQC
Trigger: ACATTGGAGAGCTGCAGACAACATAACGGTGAATGA...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCACTGTCTTCTTCATCTaGAAGGTGGCAATGATGATC +
Preference number: 5 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPTVFFI*KVAMMI
Trigger: GATCATCATTGCCACCTTCAAGATGAAGAAGACAGT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATCTGCCACTGCCAGGTaGAGGAACCAGACCATGTTC +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPSATAR*RNQTMF
Trigger: GAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAGA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GAGGAATCACCGACCACTTTCATCCAAACCAGACACCACCTCGTTTTGCAGAGTATTGGGAGGAAGACGTaGAACAGGAAATCTGCCACT +
Preference number: 5 (lower is better)
Translates to: EESPTTFIQTRHHLVLQSIGRKT*NRKSAT
Trigger: AGTGGCAGATTTCCTGTTCAACGTCTTCCTCCCAAT...ACTCTGCAAAACGAGGTGGTGTCTGGTTTGGATGAAAGTGGTCGGTGATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACATTGGGAGGAAGACGTaGAACAGGAAATCTGCCACT +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHIGRKT*NRKSAT
Trigger: AGTGGCAGATTTCCTGTTCAACGTCTTCCTCCCAAT...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAAGGAAGTTGCTGATCTaGCACATGGCTGTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMERKLLI*HMAVPK
Trigger: TTTCGGGACAGCCATGTGCAAGATCAGCAACTTCCT...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGGTGGACAGGCTGAAGTaGTTGAAGCAGGATATTTTC +
Preference number: 5 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQVDRLK*LKQDIF
Trigger: GAAAATATCCTGCTTCAACAACTTCAGCCTGTCCAC...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTCACTTGTCTTGCCCTaGCAAAGAGCCCACAGGACC +
Preference number: 5 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSSLVLP*QRAHRT
Trigger: GGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGTCACTTGTCTTGCCCTaGCAAAGAGCCCACAGGACC +
Preference number: 5 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKSLVLP*QRAHRT
Trigger: GGTCCTGTGGGCTCTTTGCAAGGGCAAGACAAGTGA...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGCGTTGCATCCCTCACTaGTCTTGCCCTTGCAAAGAG +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQRCIPH*SCPCKE
Trigger: CTCTTTGCAAGGGCAAGACAAGTGAGGGATGCAACG...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGAATCTCAAGTCCTCGTaGCATCCCTCACTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMNLKSS*HPSLVL
Trigger: CAAGACAAGTGAGGGATGCAACGAGGACTTGAGATT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATAATCTCAAGTCCTCGTaGCATCCCTCACTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: ALIFRRHILGCPWVERVHNLKSS*HPSLVL
Trigger: CAAGACAAGTGAGGGATGCAACGAGGACTTGAGATT...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCTGTCTCCAAAGGCGTaGAGGAAATTAACCAGAATG +
Preference number: 5 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQLSPKA*RKLTRM
Trigger: CATTCTGGTTAATTTCCTCAACGCCTTTGGAGACAG...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGCTGTCTCCAAAGGCGTaGAGGAAATTAACCAGAATG +
Preference number: 5 (lower is better)
Translates to: SSEDISLGVPGLRESIEGLSPKA*RKLTRM
Trigger: CATTCTGGTTAATTTCCTCAACGCCTTTGGAGACAG...CCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGTCCCTCCCCATTGCCTaGATCTCTGGAGACATAGGA +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQSLPIA*ISGDIG
Trigger: TCCTATGTCTCCAGAGATCAAGGCAATGGGGAGGGA...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCAGGAAAACAGCCGGTTaGAATTGTGCTCCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPRKTAG*NCAPVY
Trigger: ATAAACAGGAGCACAATTCAAACCGGCTGTTTTCCT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGTTGAGGTTTCAGTGTTaGTGCCTGAACCATCGTAGG +
Preference number: 5 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLLRFQC*CLNHRR
Trigger: CCTACGATGGTTCAGGCACAAACACTGAAACCTCAA...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACTTGAGGTTTCAGTGTTaGTGCCTGAACCATCGTAGG +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHLRFQC*CLNHRR
Trigger: CCTACGATGGTTCAGGCACAAACACTGAAACCTCAA...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACTTGAGGTTTCAGTGTTaGTGCCTGAACCATCGTAGG +
Preference number: 5 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNLRFQC*CLNHRR
Trigger: CCTACGATGGTTCAGGCACAAACACTGAAACCTCAA...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS CCA 90 bp TGTAATCTTCATCCTCCATTCTATGTCACGCCTCCCATCAAGAAGTaGACTCTATTTCTCCTCCCCTTGAATCTGCACTGGCATGGTGAG +
Preference number: 5 (lower is better)
Translates to: CNLHPPFYVTPPIKK*TLFLLPLNLHWHGE
Trigger: CTCACCATGCCAGTGCAGATTCAAGGGGAGGAGAAATAGAGTCCACTTCTTGATGGGAGGCGTGACATAGAATGGAGGATGAAGATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552995.5
CDS-3UTR CAA 90 bp GGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCAAGCAGTTCATTCATTaGTTCATTCAAGATCCCCCT +
Preference number: 5 (lower is better)
Translates to: GCMEHSMFCPLEERGSRPKQFIH*FIQDPP
Trigger: AGGGGGATCTTGAATGAACAAATGAATGAACTGCTT...GGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCATGATCACCAGACCATaGCCCAGAATCCCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSMITRP*PRIPRK
Trigger: CTTCCTCGGGATTCTGGGCAATGGTCTGGTGATCAT...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATACTGTCTTCTTCATCTaGAAGGTGGCAATGATGATC +
Preference number: 5 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDTVFFI*KVAMMI
Trigger: GATCATCATTGCCACCTTCAAGATGAAGAAGACAGT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAGGCTTGGATGAGAAGGAAGTaGCTGATCTTGCACATGGCT +
Preference number: 5 (lower is better)
Translates to: RSLMVFTIGFYLLPPIQAWMRRK*LILHMA
Trigger: AGCCATGTGCAAGATCAGCAACTTCCTTCTCATCCA...AGCCTGGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAACGCTGGTGAACATGTaGTGGATGAGAAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMETLVNM*WMRRKL
Trigger: CAACTTCCTTCTCATCCACAACATGTTCACCAGCGT...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAACACGTGGACAGGCTGAAGTaGTTGAAGCAGGATATTTTC +
Preference number: 5 (lower is better)
Translates to: QGWPPKKHKLLVQGCMEHVDRLK*LKQDIF
Trigger: GAAAATATCCTGCTTCAACAACTTCAGCCTGTCCAC...GTGTTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp CAGAGTTTCTGGAGCCAGACGGAGCCAGGTTCAGATCTTAACTCTGCCACTGATATGGTCACAATAATCTaGAAGGGCTTCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: QSFWSQTEPGSDLNSATDMVTII*KGFLVL
Trigger: CAAGACCAAGAAGCCCTTCAAGATTATTGTGACCAT...ATCAGTGGCAGAGTTAAGATCTGAACCTGGCTCCGTCTGGCTCCAGAAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGTCAGAAGACATATCCTaGGGTGTCCCTGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERSEDIS*GVPGLR
Trigger: TCTCAACCCAGGGACACCCAAGGATATGTCTTCTGA...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCACACCAGGAATGGACCTaGGAGAGTGTCATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPHQEWT*ESVISG
Trigger: CCCAGAAATGACACTCTCCAAGGTCCATTCCTGGTG...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGTCCTTTCTCATTTCTTaGCCAAATCTCAAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQSFLIS*PNLKSS
Trigger: CGAGGACTTGAGATTTGGCAAAGAAATGAGAAAGGA...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGCATTCCTTTCTCATTTCTTaGCCAAATCTCAAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: QHVLSTRRKGFQALDSQHSFLIS*PNLKSS
Trigger: CGAGGACTTGAGATTTGGCAAAGAAATGAGAAAGGA...ATGCTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GCCTTGATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATCTGTCTCCAAAGGCGTaGAGGAAATTAACCAGAATG +
Preference number: 5 (lower is better)
Translates to: ALIFRRHILGCPWVERVHLSPKA*RKLTRM
Trigger: CATTCTGGTTAATTTCCTCAACGCCTTTGGAGACAG...ATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAGTATCCAGGAGGTATTaGGTGTCTGCAGCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEVSRRY*VSAAQK
Trigger: TTTCTGAGCTGCAGACACCAAATACCTCCTGGATAC...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GAAGACATATCCTTGGGTGTCCCTGGGTTGAGAGAGTCCATTGAGGGGTTCCACTCTGTTCATTGCATCTaGTTGGAGAATCAGCTTAAC +
Preference number: 5 (lower is better)
Translates to: EDISLGVPGLRESIEGFHSVHCI*LENQLN
Trigger: GTTAAGCTGATTCTCCAACAAGATGCAATGAACAGA...GTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATTCAGAGGCTCCAGCTaGGGATCAATTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPFRGSS*GSIQSC
Trigger: GCAGCTCTGAATTGATCCCAAGCTGGAGCCTCTGAA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCAGGATTTGGTAACCTaGGGCCTAGGGCATCCCAGC +
Preference number: 5 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRQDLVT*GLGHPS
Trigger: GCTGGGATGCCCTAGGCCCAAGGTTACCAAATCCTG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCTTCCAAACCCAGGATTaGGTAACCTTGGGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSFQTQD*VTLGLG
Trigger: CCCTAGGCCCAAGGTTACCAAATCCTGGGTTTGGAA...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGAAGCAGTTCATTCATTaGTTCATTCAAGATCCCCCT +
Preference number: 5 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQKQFIH*FIQDPP
Trigger: AGGGGGATCTTGAATGAACAAATGAATGAACTGCTT...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGACTGTCTTCTTCATCTaGAAGGTGGCAATGATGATC +
Preference number: 5 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMTVFFI*KVAMMI
Trigger: GATCATCATTGCCACCTTCAAGATGAAGAAGACAGT...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGAGGAAGTTGCTGATCTaGCACATGGCTGTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKRKLLI*HMAVPK
Trigger: TTTCGGGACAGCCATGTGCAAGATCAGCAACTTCCT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAGTGGACAGGCTGAAGTaGTTGAAGCAGGATATTTTC +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEVDRLK*LKQDIF
Trigger: GAAAATATCCTGCTTCAACAACTTCAGCCTGTCCAC...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp ACACAGCATGTTCTGTCCACTAGAAGAAAGGGGTTCCAGGCCCTAGATTCCCAGAAAGAGGTTCTTGCCTaGATCTTCAGAAGACATATC +
Preference number: 5 (lower is better)
Translates to: TQHVLSTRRKGFQALDSQKEVLA*IFRRHI
Trigger: GATATGTCTTCTGAAGATCAAGGCAAGAACCTCTTT...CTGGGAATCTAGGGCCTGGAACCCCTTTCTTCTAGTGGACAGAACATGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGACACAGAGCAGTGACTaGAAGGTAGGGTTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKTQSSD*KVGFSG
Trigger: GCCAGAAAACCCTACCTTCAAGTCACTGCTCTGTGT...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCATCCCTCACTTGTCTaGCCCTTGCAAAGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRHPSLV*PLQRAH
Trigger: GTGGGCTCTTTGCAAGGGCAAGACAAGTGAGGGATG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp CAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGGGCAAGTTACTTAACTCCTTTCTCATTTCTTaGCCAAATCTCAAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: QIQAPAETSWVPLGKLLNSFLIS*PNLKSS
Trigger: CGAGGACTTGAGATTTGGCAAAGAAATGAGAAAGGA...GTTAAGTAACTTGCCCAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGTATCCAGGAGGTATTaGGTGTCTGCAGCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQVSRRY*VSAAQK
Trigger: TTTCTGAGCTGCAGACACCAAATACCTCCTGGATAC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGGCAGGTGAGCACACTTaGCACACTGCAGGGACGATA +
Preference number: 5 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRAGEHT*HTAGTI
Trigger: TATCGTCCCTGCAGTGTGCAAAGTGTGCTCACCTGC...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATCTGCCAGGGCCAATTaGAGGTTTCAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPSARAN*RFQCLC
Trigger: GCACAAACACTGAAACCTCAAATTGGCCCTGGCAGA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAATTGGGAGGAAGACGTaGAACAGGAAATCTGCCACT +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPIGRKT*NRKSAT
Trigger: AGTGGCAGATTTCCTGTTCAACGTCTTCCTCCCAAT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGTGGATGAGAAGGAAGTaGCTGATCTTGCACATGGCT +
Preference number: 5 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKWMRRK*LILHMA
Trigger: AGCCATGTGCAAGATCAGCAACTTCCTTCTCATCCA...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCACGCTGGTGAACATGTaGTGGATGAGAAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSTLVNM*WMRRKL
Trigger: CAACTTCCTTCTCATCCACAACATGTTCACCAGCGT...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGGTGGACAGGCTGAAGTaGTTGAAGCAGGATATTTTC +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQVDRLK*LKQDIF
Trigger: GAAAATATCCTGCTTCAACAACTTCAGCCTGTCCAC...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGTCAAGGCTGGCCTCCCAAGAAGCATAAATTGCTAGTCCAAGGCTGTATGGAAATGGTCACAATAATCTaGAAGGGCTTCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SQGWPPKKHKLLVQGCMEMVTII*KGFLVL
Trigger: CAAGACCAAGAAGCCCTTCAAGATTATTGTGACCAT...TTCCATACAGCCTTGGACTAGCAATTTATGCTTCTTGGGAGGCCAGCCTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp AGGCAAACTGAAGTTCAAATCCAAGCTCCGGCAGAGACTAGCTGGGTACCTTTGTTCATTGATGACATCTaGGTAAAGCTTCTATGGCTG +
Preference number: 5 (lower is better)
Translates to: RQTEVQIQAPAETSWVPLFIDDI*VKLLWL
Trigger: CAGCCATAGAAGCTTTACCAAGATGTCATCAATGAA...CAAAGGTACCCAGCTAGTCTCTGCCGGAGCTTGGATTTGAACTTCAGTTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGCGTTGCATCCCTCACTaGTCTTGCCCTTGCAAAGAG +
Preference number: 5 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRRCIPH*SCPCKE
Trigger: CTCTTTGCAAGGGCAAGACAAGTGAGGGATGCAACG...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TGCAGAGTCCTCAGGGGAAGCTCTCAAAACCTCAGTTCCCTCATCTGTGAAATGTCTGTTCATTGCATCTaGTTGGAGAATCAGCTTAAC +
Preference number: 5 (lower is better)
Translates to: CRVLRGSSQNLSSLICEMSVHCI*LENQLN
Trigger: GTTAAGCTGATTCTCCAACAAGATGCAATGAACAGA...CATTTCACAGATGAGGGAACTGAGGTTTTGAGAGCTTCCCCTGAGGACTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGAACAGCCGGTTTGAATaGTGCTCCTGTTTATCAGCT +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQNSRFE*CSCLSA
Trigger: AGCTGATAAACAGGAGCACAATTCAAACCGGCTGTT...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAATCTGCCACTGCCAGGTaGAGGAACCAGACCATGTTC +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNESATAR*RNQTMF
Trigger: GAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAGA...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAGGGGACTCTCCGGAGTaGCTTCCCAAAGCTGCATTT +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNEGDSPE*LPKAAF
Trigger: AAATGCAGCTTTGGGAAGCAACTCCGGAGAGTCCCC...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAAGACACCACCTCGTTTaGCAGAGTCCTCAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNERHHLV*QSPQGK
Trigger: CTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTCT...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAATGATCACCAGACCATaGCCCAGAATCCCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNEMITRP*PRIPRK
Trigger: CTTCCTCGGGATTCTGGGCAATGGTCTGGTGATCAT...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAACTGTCTTCTTCATCTaGAAGGTGGCAATGATGATC +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPTVFFI*KVAMMI
Trigger: GATCATCATTGCCACCTTCAAGATGAAGAAGACAGT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp TTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGGTTCATTGATGACATCTaGGTAAAGCTTCTATGGCTG +
Preference number: 5 (lower is better)
Translates to: LLVQGCMEHSMFCPLEERFIDDI*VKLLWL
Trigger: CAGCCATAGAAGCTTTACCAAGATGTCATCAATGAA...CCTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TTCCAGGCCCTAGATTCCCAGCATAAAACACTGTTCATCCCATGCAAAATGCAGAAAGAGGTTCTTGCCTaGATCTTCAGAAGACATATC +
Preference number: 5 (lower is better)
Translates to: FQALDSQHKTLFIPCKMQKEVLA*IFRRHI
Trigger: GATATGTCTTCTGAAGATCAAGGCAAGAACCTCTTT...CTGCATTTTGCATGGGATGAACAGTGTTTTATGCTGGGAATCTAGGGCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAAGGAAAACAGCCGGTTaGAATTGTGCTCCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPRKTAG*NCAPVY
Trigger: ATAAACAGGAGCACAATTCAAACCGGCTGTTTTCCT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAACTTCTGCTATCATTGTaGCAGAGCCCTGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNELLLSL*QSPEPP
Trigger: AGGAGGCTCAGGGCTCTGCAACAATGATAGCAGAAG...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550402.6
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCAAAGCAGTTCATTCATTaGTTCATTCAAGATCCCCCT +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPKQFIH*FIQDPP
Trigger: AGGGGGATCTTGAATGAACAAATGAATGAACTGCTT...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312143.11
ENST00000550402.6
CDS-3UTR CAA 90 bp TTTGAAGGTCCCTTATGGTTTTCACGATTGGATTCTATCTTCTCCCACCCATCCAAAGAGGTTCTTGCCTaGATCTTCAGAAGACATATC +
Preference number: 5 (lower is better)
Translates to: FEGPLWFSRLDSIFSHPSKEVLA*IFRRHI
Trigger: GATATGTCTTCTGAAGATCAAGGCAAGAACCTCTTT...GGATGGGTGGGAGAAGATAGAATCCAATCGTGAAAACCATAAGGGACCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAATCTGCCAGGGCCAATTaGAGGTTTCAGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNESARAN*RFQCLC
Trigger: GCACAAACACTGAAACCTCAAATTGGCCCTGGCAGA...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAATGGATGAGAAGGAAGTaGCTGATCTTGCACATGGCT +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNEWMRRK*LILHMA
Trigger: AGCCATGTGCAAGATCAGCAACTTCCTTCTCATCCA...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGATGGTCACAATAATCTaGAAGGGCTTCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRMVTII*KGFLVL
Trigger: CAAGACCAAGAAGCCCTTCAAGATTATTGTGACCAT...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS-3UTR CAA 90 bp TCCACAGATAAATTCCAAATAGAAGAACAGAGTTTCTGGAGCCAGACGGAGCCATTTAAAGCTCCCTTTTaGCTCTCAAACCGTCTATAT +
Preference number: 5 (lower is better)
Translates to: STDKFQIEEQSFWSQTEPFKAPF*LSNRLY
Trigger: ATATAGACGGTTTGAGAGCAAAAAGGGAGCTTTAAA...TGGCTCCGTCTGGCTCCAGAAACTCTGTTCTTCTATTTGGAATTTATCTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp ATTGCTAGTCCAAGGCTGTATGGAACACAGCATGTTCTGTCCACTAGAAGAAAGTTTAAAGCTCCCTTTTaGCTCTCAAACCGTCTATAT +
Preference number: 5 (lower is better)
Translates to: IASPRLYGTQHVLSTRRKFKAPF*LSNRLY
Trigger: ATATAGACGGTTTGAGAGCAAAAAGGGAGCTTTAAA...CTTTCTTCTAGTGGACAGAACATGCTGTGTTCCATACAGCCTTGGACTAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS TCA 90 bp AAACCACAATGGAGTCTAAATAATCAGGGTATTCATCACCGTAACTaGTGGAAGTGTTGTAATCTTCATCCTCCATTCTCATTCACCGTT +
Preference number: 5 (lower is better)
Translates to: KPQWSLNNQGIHHRN*WKCCNLHPPFSFTV
Trigger: AACGGTGAATGAGAATGGAGGATGAAGATTACAACACTTCCATCAGTTACGGTGATGAATACCCTGATTATTTAGACTCCATTGTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAAATGGTCACAATAATCTaGAAGGGCTTCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNEMVTII*KGFLVL
Trigger: CAAGACCAAGAAGCCCTTCAAGATTATTGTGACCAT...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp AAACACTGTTCATCCCATGCAAAATGCAGTGAAAATTGGTGGATGCTAAAGAGGTTTAAAGCTCCCTTTTaGCTCTCAAACCGTCTATAT +
Preference number: 5 (lower is better)
Translates to: KHCSSHAKCSENWWMLKRFKAPF*LSNRLY
Trigger: ATATAGACGGTTTGAGAGCAAAAAGGGAGCTTTAAA...CCTCTTTAGCATCCACCAATTTTCACTGCATTTTGCATGGGATGAACAGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS-3UTR CAA 90 bp GTAGACATTGCATCTGTTCATTGCATCTTGTTGGAGAATCAGCTTAACAATGAATTCATTGATGACATCTaGGTAAAGCTTCTATGGCTG +
Preference number: 5 (lower is better)
Translates to: VDIASVHCILLENQLNNEFIDDI*VKLLWL
Trigger: CAGCCATAGAAGCTTTACCAAGATGTCATCAATGAA...TTCATTGTTAAGCTGATTCTCCAACAAGATGCAATGAACAGATGCAATGTCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
CDS TCA 72 bp TGGGCTTCCCTCTGGTCTCTGCCCGGAAGGTCTTCCTaGGGGTTCCCTGTGACTGCAGGCCACTCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: WASLWSLPGRSS*GFPVTAGHSRL
Trigger: CAGCCTCGAGTGGCCTGCAGTCACAGGGAACCCTCAGGAAGACCTTCCGGGCAGAGACCAGAGGGAAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS CAA 90 bp GGTGACAGTCACCACCATGTGCCGGCTATACCCCACAGGGTCCATTaGGGAGTGAGTGGGCCACGAGGAAGACCCAGGTGTGGACAGGCT +
Preference number: 6 (lower is better)
Translates to: GDSHHHVPAIPHRVH*GVSGPRGRPRCGQA
Trigger: AGCCTGTCCACACCTGGGTCTTCCTCGTGGCCCACTCACTCCCAAATGGACCCTGTGGGGTATAGCCGGCACATGGTGGTGACTGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS TCA 72 bp ATGTGCCGGCTATACCCCACAGGGTCCATTTGGGAGTaGGTGGGCCACGAGGAAGACCCAGGTGTGGACAGG +
Preference number: 6 (lower is better)
Translates to: MCRLYPTGSIWE*VGHEEDPGVDR
Trigger: CCTGTCCACACCTGGGTCTTCCTCGTGGCCCACTCACTCCCAAATGGACCCTGTGGGGTATAGCCGGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS CAA 72 bp CACCACCATGTGCCGGCTATACCCCACAGGGTCCATTaGGGAGTGAGTGGGCCACGAGGAAGACCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: HHHVPAIPHRVH*GVSGPRGRPRC
Trigger: ACACCTGGGTCTTCCTCGTGGCCCACTCACTCCCAAATGGACCCTGTGGGGTATAGCCGGCACATGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS CCA 72 bp AGGCCACTCGAGGCTGTTGGGGAGACTTGCACACCCTaGCTTCTTTCTGCCAATCACAGGCTCCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RPLEAVGETCTP*LLSANHRLLWL
Trigger: CAGCCAGAGGAGCCTGTGATTGGCAGAAAGAAGCCAGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS GCA 72 bp TGTGACTGCAGGCCACTCGAGGCTGTTGGGGAGACTTaGACACCCTGGCTTCTTTCTGCCAATCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: CDCRPLEAVGET*TPWLLSANHRL
Trigger: GAGCCTGTGATTGGCAGAAAGAAGCCAGGGTGTGCAAGTCTCCCCAACAGCCTCGAGTGGCCTGCAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312143.11
ENST00000550402.6
ENST00000552995.5
CDS GCA 72 bp CCAGACCATTGCCCAGAATCCCGAGGAAGCAGACGATaGTGTAGACCACCACCAGGAAGATCCTGGTCACCC +
Preference number: 6 (lower is better)
Translates to: PDHCPESRGSRR*CRPPPGRSWSP
Trigger: GGGTGACCAGGATCTTCCTGGTGGTGGTCTACAGCATCGTCTGCTTCCTCGGGATTCTGGGCAATGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS GCA 72 bp GCCCTGAGCCTCCTGGTAGAAAAATCCAAGCAGTTCTaGTGGAGAGATGGGCTTCCCTCTGGTCTCTGCCCG +
Preference number: 6 (lower is better)
Translates to: ALSLLVEKSKQF*WRDGLPSGLCP
Trigger: CGGGCAGAGACCAGAGGGAAGCCCATCTCTCCAGCAGAACTGCTTGGATTTTTCTACCAGGAGGCTCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS CCA 72 bp AGCAGACGATGCTGTAGACCACCACCAGGAAGATCCTaGTCACCCTGGCTTCCAAGGGGGATAAGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SRRCCRPPPGRS*SPWLPRGISPP
Trigger: TGGAGGACTTATCCCCCTTGGAAGCCAGGGTGACCAGGATCTTCCTGGTGGTGGTCTACAGCATCGTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS CCA 72 bp CTGAGCCTCCTGGTAGAAAAATCCAAGCAGTTCTGCTaGAGAGATGGGCTTCCCTCTGGTCTCTGCCCGGAA +
Preference number: 6 (lower is better)
Translates to: LSLLVEKSKQFC*RDGLPSGLCPE
Trigger: TTCCGGGCAGAGACCAGAGGGAAGCCCATCTCTCCAGCAGAACTGCTTGGATTTTTCTACCAGGAGGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS CCA 72 bp TGCTGTAGACCACCACCAGGAAGATCCTGGTCACCCTaGCTTCCAAGGGGGATAAGTCCTCCAAAACCACAA +
Preference number: 6 (lower is better)
Translates to: CCRPPPGRSWSP*LPRGISPPKPQ
Trigger: TTGTGGTTTTGGAGGACTTATCCCCCTTGGAAGCCAGGGTGACCAGGATCTTCCTGGTGGTGGTCTACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS CAA 72 bp GGCCACGAGGAAGACCCAGGTGTGGACAGGCTGAAGTaGTTGAAGCAGGATATTTTCCCATGCAGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: GHEEDPGVDRLK*LKQDIFPCRLA
Trigger: AGCCAACCTGCATGGGAAAATATCCTGCTTCAACAACTTCAGCCTGTCCACACCTGGGTCTTCCTCGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS GCA 72 bp GACAGGCTGAAGTTGTTGAAGCAGGATATTTTCCCATaGAGGTTGGCTGTGTCCCGGAAGACGAGAGATGGG +
Preference number: 6 (lower is better)
Translates to: DRLKLLKQDIFP*RLAVSRKTRDG
Trigger: CCCATCTCTCGTCTTCCGGGACACAGCCAACCTGCATGGGAAAATATCCTGCTTCAACAACTTCAGCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS CCA 72 bp CCAGTGGTAGTCCATGGCGGCATAGGTGATATGGATTaGGAGGAAGACGTTGAACAGGAAATCTGCCACTGC +
Preference number: 6 (lower is better)
Translates to: PVVVHGGIGDMD*EEDVEQEICHC
Trigger: GCAGTGGCAGATTTCCTGTTCAACGTCTTCCTCCCAATCCATATCACCTATGCCGCCATGGACTACCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS TCA 72 bp GATCTTCAGAAGACATATCCTTGGGTGTCCCTGGGTTaGGAGAGTCCATTGAGGGGTTCCACAGTGAGGATC +
Preference number: 6 (lower is better)
Translates to: DLQKTYPWVSLG*ESPLRGSTVRI
Trigger: GATCCTCACTGTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAGGATATGTCTTCTGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS CAA 90 bp ACTGCCAGGTTGAGGAACCAGACCATGTTCACTGTCTTCTTCATCTaGAAGGTGGCAATGATGATCACCAGACCATTGCCCAGAATCCCG +
Preference number: 6 (lower is better)
Translates to: TARLRNQTMFTVFFI*KVAMMITRPLPRIP
Trigger: CGGGATTCTGGGCAATGGTCTGGTGATCATCATTGCCACCTTCAAGATGAAGAAGACAGTGAACATGGTCTGGTTCCTCAACCTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS CAA 90 bp GTGGACAGGCTGAAGTTGTTGAAGCAGGATATTTTCCCATGCAGGTaGGCTGTGTCCCGGAAGACGAGAGATGGGGAACTCAAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: VDRLKLLKQDIFPCR*AVSRKTRDGELKKK
Trigger: TTTCTTCTTGAGTTCCCCATCTCTCGTCTTCCGGGACACAGCCAACCTGCATGGGAAAATATCCTGCTTCAACAACTTCAGCCTGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000550402.6
ENST00000552995.5
CDS TCA 72 bp CTCCCCTTGAATCTGCACTGGCATGGTGAGTTGCTGTaGCCAACAGAAAGTGGTAGAAGTGATGCTGTGCTA +
Preference number: 6 (lower is better)
Translates to: LPLNLHWHGELL*PTESGRSDAVL
Trigger: TAGCACAGCATCACTTCTACCACTTTCTGTTGGTCACAGCAACTCACCATGCCAGTGCAGATTCAAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS TCA 72 bp CTCCCATCAAGAAGTGGACTCTATTTCTCCTCCCCTTaGATCTGCACTGGCATGGTGAGTTGCTGTGACCAA +
Preference number: 6 (lower is better)
Translates to: LPSRSGLYFSSP*ICTGMVSCCDQ
Trigger: TTGGTCACAGCAACTCACCATGCCAGTGCAGATTCAAGGGGAGGAGAAATAGAGTCCACTTCTTGATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS GCA 72 bp GATTGGGAGGAAGACGTTGAACAGGAAATCTGCCACTaGCAGGTTGAGGAACCAGACCATGTTCACTGTCTT +
Preference number: 6 (lower is better)
Translates to: DWEEDVEQEICH*QVEEPDHVHCL
Trigger: AAGACAGTGAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAGATTTCCTGTTCAACGTCTTCCTCCCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS GCA 72 bp GATATGGATTGGGAGGAAGACGTTGAACAGGAAATCTaGCACTGCCAGGTTGAGGAACCAGACCATGTTCAC +
Preference number: 6 (lower is better)
Translates to: DMDWEEDVEQEI*HCQVEEPDHVH
Trigger: GTGAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAGATTTCCTGTTCAACGTCTTCCTCCCAATCCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS CCA 72 bp CAGCTAGAAACACATGTCACGCCTCCCATCAAGAAGTaGACTCTATTTCTCCTCCCCTTGAATCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: QLETHVTPPIKK*TLFLLPLNLHW
Trigger: CCAGTGCAGATTCAAGGGGAGGAGAAATAGAGTCCACTTCTTGATGGGAGGCGTGACATGTGTTTCTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550402.6
CDS CCA 72 bp CATCCTCCATTCTATGTCACGCCTCCCATCAAGAAGTaGACTCTATTTCTCCTCCCCTTGAATCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: HPPFYVTPPIKK*TLFLLPLNLHW
Trigger: CCAGTGCAGATTCAAGGGGAGGAGAAATAGAGTCCACTTCTTGATGGGAGGCGTGACATAGAATGGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552995.5
CDS CAA 72 bp AGGAAGACGTTGAACAGGAAATCTGCCACTGCCAGGTaGAGGAACCAGACCATGTTCACTGTCTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: RKTLNRKSATAR*RNQTMFTVFFI
Trigger: GATGAAGAAGACAGTGAACATGGTCTGGTTCCTCAACCTGGCAGTGGCAGATTTCCTGTTCAACGTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS GCA 72 bp AGATCTCTAGATGCCATCAGCTTCTGCTATCATTGTTaGAGAGCCCTGAGCCTCCTGGTAGAAAAATCCAAG +
Preference number: 6 (lower is better)
Translates to: RSLDAISFCYHC*RALSLLVEKSK
Trigger: CTTGGATTTTTCTACCAGGAGGCTCAGGGCTCTGCAACAATGATAGCAGAAGCTGATGGCATCTAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000550402.6
ENST00000552995.5
CDS CAA 72 bp TTGAGGAACCAGACCATGTTCACTGTCTTCTTCATCTaGAAGGTGGCAATGATGATCACCAGACCATTGCCC +
Preference number: 6 (lower is better)
Translates to: LRNQTMFTVFFI*KVAMMITRPLP
Trigger: GGGCAATGGTCTGGTGATCATCATTGCCACCTTCAAGATGAAGAAGACAGTGAACATGGTCTGGTTCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5
CDS CCA 72 bp TGGCTTCCAAGGGGGATAAGTCCTCCAAAACCACAATaGAGTCTAAATAATCAGGGTATTCATCACCGTAAC +
Preference number: 6 (lower is better)
Translates to: WLPRGISPPKPQ*SLNNQGIHHRN
Trigger: GTTACGGTGATGAATACCCTGATTATTTAGACTCCATTGTGGTTTTGGAGGACTTATCCCCCTTGGAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312143.11
ENST00000412676.5
ENST00000549466.1
ENST00000550402.6
ENST00000550573.5
ENST00000552995.5