RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CMIP (Homo sapiens)

Ensembl gene IDs: ENSG00000153815

Ensembl transcript IDs: ENST00000398040.8, ENST00000537098.8, ENST00000539778.6, ENST00000561605.1, ENST00000564666.1, ENST00000565029.5, ENST00000565680.1, ENST00000566462.2, ENST00000566513.5, ENST00000569146.1, ENST00000621537.4, ENST00000623842.1

Found 1168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCTTAGCTCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTaGCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCCTATGC +
Preference number: 1 (lower is better)
Translates to: LLSSHQDHPQLLIRP*LSRPTSLGPRFLLC
Trigger: GCATAGGAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGAGCTAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp TACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTaGCGCCGCCGCTCATGGTGTGTAATTAGGAGGCGCCAAGAGCAA +
Preference number: 1 (lower is better)
Translates to: YTRGGSSSVLPAVLL*RRRSWCVIRRRQEQ
Trigger: TTGCTCTTGGCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 90 bp AACGTGGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTaGCCTCAGGCTGCCTGCTCCTTAGCTCCCACCAGGACCACCCAC +
Preference number: 1 (lower is better)
Translates to: NVVAGSVQHVIGNGP*PQAACSLAPTRTTH
Trigger: GTGGGTGGTCCTGGTGGGAGCTAAGGAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACCACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp TGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTaGCTGCTCCTTAGCTCCCACCAGGACCACCCACAGCTGCTCATC +
Preference number: 1 (lower is better)
Translates to: WLSTTCDWEWALASG*LLLSSHQDHPQLLI
Trigger: GATGAGCAGCTGTGGGTGGTCCTGGTGGGAGCTAAGGAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp ACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGGACCTCGCTGTaGGCAGCACACACTAAAGGAGTGCAAAGTCGCGCTCTGGGTCCT +
Preference number: 1 (lower is better)
Translates to: TPAPFHTVLSGRTSL*AAHTKGVQSRALGP
Trigger: AGGACCCAGAGCGCGACTTTGCACTCCTTTAGTGTGTGCTGCGCACAGCGAGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp TCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCTaGTCCTTAGCTCCCACCAGGACCACCCACAGCTGCTCATCAGAC +
Preference number: 1 (lower is better)
Translates to: SVQHVIGNGPWPQAA*SLAPTRTTHSCSSD
Trigger: GTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGAGCTAAGGAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 90 bp GCATCCCCAGACACCTGGGATCACTTAGGGGGTACTCGTTACAAGTaGGGCGAGGACTCATGGCTGAGGGTCCCTACTCTCTGCCAGACT +
Preference number: 1 (lower is better)
Translates to: ASPDTWDHLGGTRYK*GEDSWLRVPTLCQT
Trigger: AGTCTGGCAGAGAGTAGGGACCCTCAGCCATGAGTCCTCGCCTCACTTGTAACGAGTACCCCCTAAGTGATCCCAGGTGTCTGGGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp GACCTTGATCACCTGGCTGAGGCTGAGTGTGTCTGGTTTCTCCACTaGAAGGCTACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: DLDHLAEAECVWFLH*KATPAPFHTVLSGR
Trigger: CCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGAGAAACCAGACACACTCAGCCTCAGCCAGGTGATCAAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 90 bp TGCGCAGCACACACTAAAGGAGTGCAAAGTCGCGCTCTGGGTCCTTaGGGGCAGGGCATCTACAGACATTATTTGGGCCTATTCTTCCCG +
Preference number: 1 (lower is better)
Translates to: CAAHTKGVQSRALGP*GQGIYRHYLGLFFP
Trigger: CGGGAAGAATAGGCCCAAATAATGTCTGTAGATGCCCTGCCCTCAAGGACCCAGAGCGCGACTTTGCACTCCTTTAGTGTGTGCTGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 90 bp GTTGTCGATGTTGACCTTGATCACCTGGCTGAGGCTGAGTGTGTCTaGTTTCTCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTG +
Preference number: 1 (lower is better)
Translates to: VVDVDLDHLAEAECV*FLHCKATPAPFHTV
Trigger: CACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGAGAAACCAGACACACTCAGCCTCAGCCAGGTGATCAAGGTCAACATCGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 90 bp CGTGAAAGGGAGCACATAACATATTTGCAAGAGATGCACCCAGAATaGGGGAGCCCCCAAATCCCAGAACAGCACCGTGGCTACGTTCCC +
Preference number: 1 (lower is better)
Translates to: REREHITYLQEMHPE*GSPQIPEQHRGYVP
Trigger: GGGAACGTAGCCACGGTGCTGTTCTGGGATTTGGGGGCTCCCCCATTCTGGGTGCATCTCTTGCAAATATGTTATGTGCTCCCTTTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 90 bp GGAAGAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTaGCTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAAT +
Preference number: 1 (lower is better)
Translates to: GRKHPSSGPQWWHRS*LFPHDGIKHKGKEN
Trigger: ATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR GCA 90 bp AGCCTCAGTTTCCTCGTGACATACAGGGCAAATAATGGCATTTGCTaGTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACAGAT +
Preference number: 1 (lower is better)
Translates to: SLSFLVTYRANNGIC*CPWNDEGTPRGHTD
Trigger: ATCTGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATTATTTGCCCTGTATGTCACGAGGAAACTGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp CTAAGCCTCAGTTTCCTCGTGACATACAGGGCAAATAATGGCATTTaGTGCTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACA +
Preference number: 1 (lower is better)
Translates to: LSLSFLVTYRANNGI*CCPWNDEGTPRGHT
Trigger: TGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATTATTTGCCCTGTATGTCACGAGGAAACTGAGGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 90 bp TTCTGTCTAACTGGCTTGTTGTTGTCGATGTTGACCTTGATCACCTaGCTGAGGCTGAGTGTGTCTGGTTTCTCCACTGCAAGGCTACTC +
Preference number: 1 (lower is better)
Translates to: FCLTGLLLSMLTLIT*LRLSVSGFSTARLL
Trigger: GAGTAGCCTTGCAGTGGAGAAACCAGACACACTCAGCCTCAGCCAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGTTAGACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 90 bp CCTTGTTGGGATTTGTCTGATGTTTTTCTCATGATTGGAATGGGGTaGTGGGTTACTGGGAGGAAGACCATAGAGGTCAAGTGTCGTTTT +
Preference number: 1 (lower is better)
Translates to: PCWDLSDVFLMIGMG*WVTGRKTIEVKCRF
Trigger: AAAACGACACTTGACCTCTATGGTCTTCCTCCCAGTAACCCATCACCCCATTCCAATCATGAGAAAAACATCAGACAAATCCCAACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp ATTTGGGCCTATTCTTCCCGGGAGGCTTTCCTCTTCTCCTCCAGCTaGGGTATTTTTGTAATTCTTAGGAACTGCAAAAAGATTCTTCCT +
Preference number: 1 (lower is better)
Translates to: IWAYSSREAFLFSSS*GIFVILRNCKKILP
Trigger: AGGAAGAATCTTTTTGCAGTTCCTAAGAATTACAAAAATACCGCAGCTGGAGGAGAAGAGGAAAGCCTCCCGGGAAGAATAGGCCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp TTCCTCTTCTCCTCCAGCTGCGGTATTTTTGTAATTCTTAGGAACTaGAAAAAGATTCTTCCTGTTGCCGTAATGGAGGACAAGCTGTAC +
Preference number: 1 (lower is better)
Translates to: FLFSSSCGIFVILRN*KKILPVAVMEDKLY
Trigger: GTACAGCTTGTCCTCCATTACGGCAACAGGAAGAATCTTTTTGCAGTTCCTAAGAATTACAAAAATACCGCAGCTGGAGGAGAAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 90 bp AAGAGCACCACACTCTTGACTCCAAGAAAGTGTTCAATAAGCATCTaGAAAAAGATGTTATTCTTATTCCTACCTGTGGTCCCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: KSTTLLTPRKCSISI*KKMLFLFLPVVPVA
Trigger: GGCCACAGGGACCACAGGTAGGAATAAGAATAACATCTTTTTGCAGATGCTTATTGAACACTTTCTTGGAGTCAAGAGTGTGGTGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 90 bp AAAGAACATTCTTTGAGACTCTCAAAGCTTCAGTTTGCTCATCCGTaGAAGGGAGCACATAACATATTTGCAAGAGATGCACCCAGAATG +
Preference number: 1 (lower is better)
Translates to: KEHSLRLSKLQFAHP*KGAHNIFARDAPRM
Trigger: CATTCTGGGTGCATCTCTTGCAAATATGTTATGTGCTCCCTTTCACGGATGAGCAAACTGAAGCTTTGAGAGTCTCAAAGAATGTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp CTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGTGTGTAATTAGGAGGCGCCGCCCCATCCCCCAGTaGGGAGTCTCCTTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: LPAVLLCRRRSWCVIRRRRPIPQ*GVSLSW
Trigger: CCAGGACAAGGAGACTCCCCACTGGGGGATGGGGCG...GCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp GGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGTTGGTAGTGGTGGCCTaGAATGCAGGAGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: GGSSSVLPAVLLCRRRSWLVVVA*NAGGER
Trigger: TCTTTCCCCTCCTGCATTCCAGGCCACCACTACCAA...CCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR TCA 90 bp GGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCGCGCTCTGGGTCCTTaGGGGCAGGGCATCTACAGA +
Preference number: 2 (lower is better)
Translates to: GGWLSTTCDWEWALASGCRALGP*GQGIYR
Trigger: TCTGTAGATGCCCTGCCCTCAAGGACCCAGAGCGCG...GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTAGGACACAGGACGGGTaGAGTGATGTGACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSRTQDG*SDVTGS
Trigger: AGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATCCAGCAGTTCTCCTCTaGCGCCGCCGCTCATGGTGT +
Preference number: 2 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHPAVLL*RRRSWC
Trigger: ACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGG...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp TCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCCCACCGTCCCTTTTCTGTTCTaGGATCCCATGGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: SHQDHPQLLIRPCLSRPTVPFLF*DPMESP
Trigger: GGGGCTCTCCATGGGATCCCAGAACAGAAAAGGGAC...GGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCGCATCCCCAGACACCTaGGATCACTTAGGGGGTACT +
Preference number: 2 (lower is better)
Translates to: STREADPPRSSQQFSSAAASPDT*DHLGGT
Trigger: AGTACCCCCTAAGTGATCCCAGGTGTCTGGGGATGC...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAGACCCCAGGACCGGCTaGTCTGCGGCTGTTAGTCAA +
Preference number: 2 (lower is better)
Translates to: TALLPGWTGEGGLAASHSDPRTG*SAAVSQ
Trigger: TTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTC...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CCA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGAATTCGGCGGGGGCTaGGCGTGCTTGTGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: HLVRELETFGNQKRTVVGEFGGG*ACLWAP
Trigger: GGGGGCCCACAAGCACGCCCAGCCCCCGCCGAATTC...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGGACCCCAGGACCGGCTaGTCTGCGGCTGTTAGTCAA +
Preference number: 2 (lower is better)
Translates to: QSDWRRRHISLFPRDHAEDPRTG*SAAVSQ
Trigger: TTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTC...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCAGTACAACATGTGATTaGGAATGGGCCCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: STREADPPRSSQQFSSAASTTCD*EWALAS
Trigger: TGAGGCCAGGGCCCATTCCCAATCACATGTTGTACT...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp GGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCACACACTAAAGGAGTaGAAAGTCGCGCTCTGGGTC +
Preference number: 2 (lower is better)
Translates to: GGWLSTTCDWEWALASGCHTLKE*KVALWV
Trigger: GACCCAGAGCGCGACTTTGCACTCCTTTAGTGTGTG...GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGAATTCGGCGGGGGCTaGGCGTGCTTGTGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKEFGGG*ACLWAP
Trigger: GGGGGCCCACAAGCACGCCCAGCCCCCGCCGAATTC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGAATTCGGCGGGGGCTaGGCGTGCTTGTGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNEFGGG*ACLWAP
Trigger: GGGGGCCCACAAGCACGCCCAGCCCCCGCCGAATTC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CCA 90 bp TGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCTGCTCTACCTGTGGTCCCTGTaGCCACTTAGTGGACCTAGC +
Preference number: 2 (lower is better)
Translates to: WLSTTCDWEWALASGCLLYLWSL*PLSGPS
Trigger: GCTAGGTCCACTAAGTGGCCACAGGGACCACAGGTA...GAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR TCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGACGGGTGCAGTGATGTaGCTGGGTCTTCTTGTCCCA +
Preference number: 2 (lower is better)
Translates to: QSDWRRRHISLFPRDHAETGAVM*LGLLVP
Trigger: TGGGACAAGAAGACCCAGTCACATCACTGCACCCGT...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR TCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGACAGGACGGGTGCAGTaGTGTGACTGGGTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: WTGEGGLAASHSSLKGAETGRVQ*CDWVFL
Trigger: CAAGAAGACCCAGTCACATCACTGCACCCGTCCTGT...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTTATTTTGTCGCGGTTaGAAACGTCTTCCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTLFCRG*KRLPAL
Trigger: CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
3UTR-3UTR GCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCAAAGATTCTTCCTGTTaGCGTAATGGAGGACAAGCT +
Preference number: 2 (lower is better)
Translates to: STREADPPRSSQQFSSAAKDSSC*RNGGQA
Trigger: AGCTTGTCCTCCATTACGGCAACAGGAAGAATCTTT...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp CCTCTGCCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTGACAAGTTAAGGTCCGAGGCTGAGTGTGTCTaGTTTCTCCACTGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: PLPSMSRGCGSAIDKLRSEAECV*FLHCKA
Trigger: AGCCTTGCAGTGGAGAAACCAGACACACTCAGCCTC...GGACCTTAACTTGTCAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp CCTCTGCCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTGACAAGTTAAGGTCCGGAGTCTCCTTGTCCTaGAGAAAGAACTGCACAGGG +
Preference number: 2 (lower is better)
Translates to: PLPSMSRGCGSAIDKLRSGVSLS*RKNCTG
Trigger: CCCTGTGCAGTTCTTTCTCCAGGACAAGGAGACTCC...GGACCTTAACTTGTCAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR TCA 90 bp GTGACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCACGCACCAGAGTGCTGTaGAGTATGGGACCGGAGGGG +
Preference number: 2 (lower is better)
Translates to: VTVVLTIRKSNSARGKVARTRVL*SMGPEG
Trigger: CCCCTCCGGTCCCATACTTCACAGCACTCTGGTGCG...TGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
3UTR-3UTR TCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATGACTCCTCTGAGCTGTaGCAGTTTCTTAGAATCTCC +
Preference number: 2 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHDSSEL*QFLRIS
Trigger: GGAGATTCTAAGAAACTGTCACAGCTCAGAGGAGTC...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTCAACAAGAATCACTTTaGATAGCAATGGTGAGGACA +
Preference number: 2 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSQQESL*IAMVRT
Trigger: TGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTG...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCGCAAAAATGTTTATGTaGCTGAAGAGGCATTCCTCT +
Preference number: 2 (lower is better)
Translates to: STREADPPRSSQQFSSAAAKMFM*LKRHSS
Trigger: AGAGGAATGCCTCTTCAGGCACATAAACATTTTTGC...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCAGACTGTCCCCTTGTTaGGATTTGTCTGATGTTTTT +
Preference number: 2 (lower is better)
Translates to: STREADPPRSSQQFSSAARLSPC*DLSDVF
Trigger: AAAAACATCAGACAAATCCCAACAAGGGGACAGTCT...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR TCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGCCCTCCCCGACCCGCTaGTGCTCCTCTTGTTGCTAC +
Preference number: 2 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGPSPTR*CSSCCY
Trigger: GTAGCAACAAGAGGAGCATCAGCGGGTCGGGGAGGG...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR TCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATGTCATGGGAATGGCATaGGGGTTAATAACACAATAC +
Preference number: 2 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHVMGMA*GLITQY
Trigger: GTATTGTGTTATTAACCCTCATGCCATTCCCATGAC...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGTTATTTTGTCGCGGTTaGAAACGTCTTCCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: QSDWRRRHISLFPRDHAELFCRG*KRLPAL
Trigger: CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAA...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp TGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCTGCTCGCAAATAATGGCATTTaGTGCTGTCCCTGGAATGAT +
Preference number: 2 (lower is better)
Translates to: WLSTTCDWEWALASGCLLANNGI*CCPWND
Trigger: ATCATTCCAGGGACAGCAGCAAATGCCATTATTTGC...GAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CAA 90 bp AGGAAGAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTaGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: RKKASFVRPAMVASE*TFPTRRHQTQRQRK
Trigger: TTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACAGACCCCAGGACCGGCTaGTCTGCGGCTGTTAGTCAA +
Preference number: 2 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTDPRTG*SAAVSQ
Trigger: TTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTC...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR TCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATTTGTTGGGATTTGTCTaGTGTTTTTCTCATGATTGG +
Preference number: 2 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHLLGFV*CFSHDW
Trigger: CCAATCATGAGAAAAACATCAGACAAATCCCAACAA...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp TGGTGGCCTGGAATGCAGGAGGGGAAAGAGTGTGATGCTGTCTCTGGCTCTACATTGATTAATGATGTCTaGCATGAGCATGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: WWPGMQEGKECDAVSGSTLINDV*HEHGRG
Trigger: ACCCCTTCCATGCTCATGGCAGACATCATTAATCAA...TGTAGAGCCAGAGACAGCATCACACTCTTTCCCCTCCTGCATTCCAGGCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGAACCCGACAGCTGACTaGTTTATACAGTACTACACG +
Preference number: 2 (lower is better)
Translates to: RELETFGNQKRTVVGGGVNPTAD*FIQYYT
Trigger: CGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTT...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CCA 90 bp GGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCAATATTCTGTCTAACTaGCTTGTTGTTGTCGATGTT +
Preference number: 2 (lower is better)
Translates to: GGWLSTTCDWEWALASGCNILSN*LVVVDV
Trigger: AACATCGACAACAACAAGCCAGTTAGACAGAATATT...GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR TCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTATGCATGGGGCCACGTaGAGCACACGATGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: HEIKPGTENELRLEPSFFMHGAT*STRWQG
Trigger: CCCCTGCCATCGTGTGCTTCACGTGGCCCCATGCAT...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTAGAGGCGGGCATGCATaGGGCCACGTGAAGCACACG +
Preference number: 2 (lower is better)
Translates to: HEIKPGTENELRLEPSFFRGGHA*GHVKHT
Trigger: CGTGTGCTTCACGTGGCCCCATGCATGCCCGCCTCT...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR CAA 90 bp CCTATGAAGGGAATATTCTGTCTAACTGGCTTGTTGTTGTCGATGTaGACCTTGATCACCTGGCTGAGGCTGAGTGTGTCTGGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: PMKGIFCLTGLLLSM*TLITWLRLSVSGFS
Trigger: GGAGAAACCAGACACACTCAGCCTCAGCCAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR TCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAACGGGTGCAGTGATGTaGCTGGGTCTTCTTGTCCCA +
Preference number: 2 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPTGAVM*LGLLVP
Trigger: TGGGACAAGAAGACCCAGTCACATCACTGCACCCGT...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAAGGACACAGGACGGGTaGAGTGATGTGACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPRTQDG*SDVTGS
Trigger: AGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCCTCTTCTCCTCCAGCTaGGGTATTTTTGTAATTCTT +
Preference number: 2 (lower is better)
Translates to: GAVGDILFFRGMVWRQASLFSSS*GIFVIL
Trigger: AAGAATTACAAAAATACCGCAGCTGGAGGAGAAGAG...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp AGGTCTTCCTGTGCCTGGCATGGCCATAATCACTGTTTAATACAGTCTGTTCTTTCCTGGAGAAAGAACTaGACAGGGTGTCCCTATCCC +
Preference number: 2 (lower is better)
Translates to: RSSCAWHGHNHCLIQSVLSWRKN*TGCPYP
Trigger: GGGATAGGGACACCCTGTGCAGTTCTTTCTCCAGGA...AAGAACAGACTGTATTAAACAGTGATTATGGCCATGCCAGGCACAGGAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTAGAAACGCACAGTGGTaGGTGGGGGAGTGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: HEIKPGTENELRLEPSFFRNAQW*VGEWAD
Trigger: GTCTGCCCACTCCCCCACCCACCACTGTGCGTTTCT...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CCA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTAAAAAGAAACGGAGGTTaGTTTGTCTTCGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLKRNGG*FVFGAG
Trigger: ACCTGCTCCGAAGACAAACCAACCTCCGTTTCTTTT...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CCA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCTGTTTTTCTCATGATTaGAATGGGGTGATGGGTTAC +
Preference number: 2 (lower is better)
Translates to: GAVGDILFFRGMVWRQASCFSHD*NGVMGY
Trigger: GTAACCCATCACCCCATTCCAATCATGAGAAAAACA...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTACAACAAGAATCACTTTaGATAGCAATGGTGAGGACA +
Preference number: 2 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLQQESL*IAMVRT
Trigger: TGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTG...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR GCA 90 bp TTTATACGTCCTATGAAGGGAATATTCTGTCTAACTGGCTTGTTGTTGTCGATGGGAAGGACCTCGCTGTaGGCAGCACACACTAAAGGA +
Preference number: 2 (lower is better)
Translates to: FIRPMKGIFCLTGLLLSMGRTSL*AAHTKG
Trigger: TCCTTTAGTGTGTGCTGCGCACAGCGAGGTCCTTCC...CATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGGACGTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CAA 90 bp TTTATACGTCCTATGAAGGGAATATTCTGTCTAACTGGCTTGTTGTaGTCGATGTTGACCTTGATCACCTGGCTGAGGCTGAGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: FIRPMKGIFCLTGLL*SMLTLITWLRLSVS
Trigger: AGACACACTCAGCCTCAGCCAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGGACGTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCTGTTCTGGGATCCCATaGAGAGCCCCAAATGACATT +
Preference number: 2 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCCSGIP*RAPNDI
Trigger: AATGTCATTTGGGGCTCTCCATGGGATCCCAGAACA...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp CCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCAATCTATTCTTCAGGGGCATaGTGTGGAGACAGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: PNLGGAQKSATIHLQFAIYSSGA*CGDRQA
Trigger: AGCTTGCCTGTCTCCACACCATGCCCCTGAAGAATA...GATTGCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CCA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCTCTACAGACATTATTTaGGCCTATTCTTCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCSTDII*AYSSRE
Trigger: CTCCCGGGAAGAATAGGCCCAAATAATGTCTGTAGA...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR GCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTTTCAAGTCTAAAAGGTaGCGAGAGAAAGAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: HEIKPGTENELRLEPSFFFKSKR*REKELG
Trigger: CCCAAGCTCTTTCTCTCGGCACCTTTTAGACTTGAA...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR TCA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCACATCACAAGTGAAATaGTGTGTGGTTACCCTTTTT +
Preference number: 2 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCTSQVK*CVVTLF
Trigger: AAAAAGGGTAACCACACATCATTTCACTTGTGATGT...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CAA 90 bp GGCATGAGGGTTAATAACACAATACACTCAAAGAGCACCACACTCTaGACTCCAAGAAAGTGTTCAATAAGCATCTGCAAAAAGATGTTA +
Preference number: 2 (lower is better)
Translates to: GMRVNNTIHSKSTTL*TPRKCSISICKKML
Trigger: TAACATCTTTTTGCAGATGCTTATTGAACACTTTCTTGGAGTCAAGAGTGTGGTGCTCTTTGAGTGTATTGTGTTATTAACCCTCATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp GGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTaGCGCCGCCGCTCATGGTGTGTAATTAGGAGGCGC +
Preference number: 3 (lower is better)
Translates to: GGSSSVLPAVLL*RRRSWCVIRRR
Trigger: GCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp GGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGCAGTGGGGAGTCTCCTaGTCCTGGAGAAAGAACTGC +
Preference number: 3 (lower is better)
Translates to: GGSSSVLPAVLLCRRRSWQWGVS*SWRKNC
Trigger: GCAGTTCTTTCTCCAGGACAAGGAGACTCCCCACTG...CCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp GCCTGCTCCTTAGCTCCCACCAGGACCACCCACAGCTaGTCATCAGACCCTGCCTATCCCGTCCCACCTCTC +
Preference number: 3 (lower is better)
Translates to: ACSLAPTRTTHS*SSDPAYPVPPL
Trigger: GAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGAGCTAAGGAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 72 bp AGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTaGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGT +
Preference number: 3 (lower is better)
Translates to: RLPIYLTARAPG*DPRTGCSAAVS
Trigger: ACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
3UTR-3UTR CAA 90 bp GGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCTCGCGCTCTGGGTCCTaGAGGGCAGGGCATCTACAG +
Preference number: 3 (lower is better)
Translates to: GGWLSTTCDWEWALASGCSRSGS*RAGHLQ
Trigger: CTGTAGATGCCCTGCCCTCAAGGACCCAGAGCGCGA...GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp TCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTaGCTATCCCGTCCCACCTCTCTGGGTCCCAGATTC +
Preference number: 3 (lower is better)
Translates to: SHQDHPQLLIRP*LSRPTSLGPRF
Trigger: GAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 72 bp GTCCTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATaGTGTGTAATTAGGAGGCGCCAAGAGCAAGGTGGG +
Preference number: 3 (lower is better)
Translates to: VLPAVLLCRRRS*CVIRRRQEQGG
Trigger: CCCACCTTGCTCTTGGCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp CACCAGCTGAGAGCCCCAGCTCCACAACGGTGCTGCTaGCCCGTGCCACTCATTAAGCATCAGGGCGCATTC +
Preference number: 3 (lower is better)
Translates to: HQLRAPAPQRCC*PVPLIKHQGAF
Trigger: GAATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTGGGGCTCTCAGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp TCTCTTTTCCCAAGAGACCATGCAGAGAGGCGGGCATaGATGGGGCCACGTGAAGCACACGATGGCAGGGGG +
Preference number: 3 (lower is better)
Translates to: SLFPRDHAERRA*MGPREAHDGRG
Trigger: CCCCCTGCCATCGTGTGCTTCACGTGGCCCCATGCATGCCCGCCTCTCTGCATGGTCTCTTGGGAAAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR GCA 72 bp GAAGGACCTCGCTGTGCGCAGCACACACTAAAGGAGTaGAAAGTCGCGCTCTGGGTCCTTGAGGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: EGPRCAQHTLKE*KVALWVLEGRA
Trigger: TGCCCTGCCCTCAAGGACCCAGAGCGCGACTTTGCACTCCTTTAGTGTGTGCTGCGCACAGCGAGGTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp ACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTaGCTGCTCCTTAGCTCCCACCAGGACCACCCACAG +
Preference number: 3 (lower is better)
Translates to: TTCDWEWALASG*LLLSSHQDHPQ
Trigger: CTGTGGGTGGTCCTGGTGGGAGCTAAGGAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp TCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTaGTCTCTGGAAGGACCTCGCTGTGCGCAGCACACA +
Preference number: 3 (lower is better)
Translates to: STARLLLPPSIQ*SLEGPRCAQHT
Trigger: TGTGTGCTGCGCACAGCGAGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGTTATTTTGTCGCGGTaGCAAACGTCTTCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: PPERLPIYLTARAPGWDPVILSR*QTSSCL
Trigger: AAGGCAGGAAGACGTTTGCAACCGCGACAAAATAAC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
3UTR TCA 72 bp TTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTaGTGTGACTGGGTCTTCTTGTCCCAAGGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: LHSNGEDTGRVQ*CDWVFLSQGRG
Trigger: CCCCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR GCA 72 bp CACCTGGCTGAGGCTGAGTGTGTCTGGTTTCTCCACTaGAAGGCTACTCCTGCCCCCTTCCATACAGTGCTC +
Preference number: 3 (lower is better)
Translates to: HLAEAECVWFLH*KATPAPFHTVL
Trigger: GAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGAGAAACCAGACACACTCAGCCTCAGCCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCTGTCTAACTGGCTTGTaGTTGTCGATGTTGACCTTG +
Preference number: 3 (lower is better)
Translates to: STREADPPRSSQQFSSAACLTGL*LSMLTL
Trigger: CAAGGTCAACATCGACAACAACAAGCCAGTTAGACA...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp CATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTaGCTTTTCCCACACGACGGCATCAAACACAAAGGC +
Preference number: 3 (lower is better)
Translates to: HPSSGPQWWHRS*LFPHDGIKHKG
Trigger: GCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR TCA 72 bp GACACCTGGGATCACTTAGGGGGTACTCGTTACAAGTaGGGCGAGGACTCATGGCTGAGGGTCCCTACTCTC +
Preference number: 3 (lower is better)
Translates to: DTWDHLGGTRYK*GEDSWLRVPTL
Trigger: GAGAGTAGGGACCCTCAGCCATGAGTCCTCGCCTCACTTGTAACGAGTACCCCCTAAGTGATCCCAGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp CCCTTCCATACAGTGCTCTCTGGAAGGACCTCGCTGTaGGCAGCACACACTAAAGGAGTGCAAAGTCGCGCT +
Preference number: 3 (lower is better)
Translates to: PFHTVLSGRTSL*AAHTKGVQSRA
Trigger: AGCGCGACTTTGCACTCCTTTAGTGTGTGCTGCGCACAGCGAGGTCCTTCCAGAGAGCACTGTATGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp CCTCTGCCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTGACAAGTTAAGGTCCTTGTTTTTGATGACCTaGACCGTGGGGAGTACTGGC +
Preference number: 3 (lower is better)
Translates to: PLPSMSRGCGSAIDKLRSLFLMT*TVGSTG
Trigger: GCCAGTACTCCCCACGGTCAAGGTCATCAAAAACAA...GGACCTTAACTTGTCAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp TCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTaGAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: SLCIAMVRTQDG*SDVTGSSCPKG
Trigger: GCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR GCA 72 bp GGACTCATGGCTGAGGGTCCCTACTCTCTGCCAGACTaGCACAGATACTATAAATTCTGGGTCTGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: GLMAEGPYSLPD*HRYYKFWVCPE
Trigger: CTCTGGGCAGACCCAGAATTTATAGTATCTGTGGCAGTCTGGCAGAGAGTAGGGACCCTCAGCCATGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 72 bp TGGGTCCTTGAGGGCAGGGCATCTACAGACATTATTTaGGCCTATTCTTCCCGGGAGGCTTTCCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: WVLEGRASTDII*AYSSREAFLFS
Trigger: GGAGAAGAGGAAAGCCTCCCGGGAAGAATAGGCCCAAATAATGTCTGTAGATGCCCTGCCCTCAAGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp TGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCTGCTCATCTACAGACATTATTaGGGCCTATTCTTCCCGGGA +
Preference number: 3 (lower is better)
Translates to: WLSTTCDWEWALASGCLLIYRHY*GLFFPG
Trigger: TCCCGGGAAGAATAGGCCCAAATAATGTCTGTAGAT...GAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp CACACTAAAGGAGTGCAAAGTCGCGCTCTGGGTCCTTaGGGGCAGGGCATCTACAGACATTATTTGGGCCTA +
Preference number: 3 (lower is better)
Translates to: HTKGVQSRALGP*GQGIYRHYLGL
Trigger: TAGGCCCAAATAATGTCTGTAGATGCCCTGCCCTCAAGGACCCAGAGCGCGACTTTGCACTCCTTTAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTATGGTGGCATCGGAGTaGACTTTTCCCACACGACGG +
Preference number: 3 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTMVASE*TFPTRR
Trigger: CCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCAT...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CAA 90 bp GTGACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCAGAAACGGAGGTTGGTTaGTCTTCGGAGCAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: VTVVLTIRKSNSARGKVAETEVG*SSEQVG
Trigger: CCCCACCTGCTCCGAAGACAAACCAACCTCCGTTTC...TGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
3UTR-3UTR CAA 90 bp CCTCTGCCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTGACAAGTTAAGGTCCGTTACCCTTTTTCAGTaGTTTTCACGTGCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: PLPSMSRGCGSAIDKLRSVTLFQ*FSRAPG
Trigger: TCCTGGAGCACGTGAAAACAACTGAAAAAGGGTAAC...GGACCTTAACTTGTCAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGGTTATTTTGTCGCGGTaGCAAACGTCTTCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: RELETFGNQKRTVVGGGVVILSR*QTSSCL
Trigger: AAGGCAGGAAGACGTTTGCAACCGCGACAAAATAAC...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CAA 90 bp ACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCATGTGCCGAGAGAAAGAGCTaGGGCCTTAGTGGAGCAAGG +
Preference number: 3 (lower is better)
Translates to: TVVLTIRKSNSARGKVACAERKS*GLSGAR
Trigger: CCTTGCTCCACTAAGGCCCAAGCTCTTTCTCTCGGC...ACATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
3UTR-3UTR CAA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCTTTCTTAGAATCTCCTaGTTTTTGATGACCTTGACC +
Preference number: 3 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLFLRIS*FLMTLT
Trigger: GGTCAAGGTCATCAAAAACAAGGAGATTCTAAGAAA...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp GTAGTGGTGGCCTGGAATGCAGGAGGGGAAAGAGTGTaGTGCTGTCTCTGGCTCTACAGAAAGAGTGCTATA +
Preference number: 3 (lower is better)
Translates to: VVVAWNAGGERV*CCLWLYRKSAI
Trigger: TATAGCACTCTTTCTGTAGAGCCAGAGACAGCATCACACTCTTTCCCCTCCTGCATTCCAGGCCACCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp TTCCTCGTGACATACAGGGCAAATAATGGCATTTGCTaGTGTCCCTGGAATGATGAGGGAACACCAAGGGGC +
Preference number: 3 (lower is better)
Translates to: FLVTYRANNGIC*CPWNDEGTPRG
Trigger: GCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATTATTTGCCCTGTATGTCACGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp TGCAAAAATGTTTATGTGCCTGAAGAGGCATTCCTCTaGCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTG +
Preference number: 3 (lower is better)
Translates to: CKNVYVPEEAFL*QVCPGGVALPL
Trigger: CAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGGAATGCCTCTTCAGGCACATAAACATTTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 72 bp ACTGGCTTGTTGTTGTCGATGTTGACCTTGATCACCTaGCTGAGGCTGAGTGTGTCTGGTTTCTCCACTGCA +
Preference number: 3 (lower is better)
Translates to: TGLLLSMLTLIT*LRLSVSGFSTA
Trigger: TGCAGTGGAGAAACCAGACACACTCAGCCTCAGCCAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTACCGCTGATGCTCCTCTaGTTGCTACAAAGTCCACTT +
Preference number: 3 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLPLMLL*LLQSPL
Trigger: AAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGG...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR TCA 72 bp AGGTCCTTCGCAAGAAAACCTGAAGAACCTTTGCTCTaGACTCCAGCATGGCACAGCCCACTCCATACACTA +
Preference number: 3 (lower is better)
Translates to: RSFARKPEEPLL*TPAWHSPLHTL
Trigger: TAGTGTATGGAGTGGGCTGTGCCATGCTGGAGTTCAGAGCAAAGGTTCTTCAGGTTTTCTTGCGAAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 72 bp AATAACAATAATACTACCACTAACCCGACAGCTGACTaGTTTATACAGTACTACACGCCAGGTGGGGGCGGG +
Preference number: 3 (lower is better)
Translates to: NNNNTTTNPTAD*FIQYYTPGGGG
Trigger: CCCGCCCCCACCTGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATTGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR-3UTR CAA 90 bp GTGACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCAGTTATTTTGTCGCGGTaGCAAACGTCTTCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: VTVVLTIRKSNSARGKVAVILSR*QTSSCL
Trigger: AAGGCAGGAAGACGTTTGCAACCGCGACAAAATAAC...TGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
3UTR-3UTR CAA 90 bp ACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCATGTGGGAGTTGGAGACATTaGGAAATCAGAAACGCACAG +
Preference number: 3 (lower is better)
Translates to: TVVLTIRKSNSARGKVACGSWRH*EIRNAQ
Trigger: CTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCC...ACATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
3UTR-3UTR CAA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAGTTATTTTGTCGCGGTaGCAAACGTCTTCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPVILSR*QTSSCL
Trigger: AAGGCAGGAAGACGTTTGCAACCGCGACAAAATAAC...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR TCA 72 bp GATTTGTCTGATGTTTTTCTCATGATTGGAATGGGGTaGTGGGTTACTGGGAGGAAGACCATAGAGGTCAAG +
Preference number: 3 (lower is better)
Translates to: DLSDVFLMIGMG*WVTGRKTIEVK
Trigger: CTTGACCTCTATGGTCTTCCTCCCAGTAACCCATCACCCCATTCCAATCATGAGAAAAACATCAGACAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp AGATTCCTCCTATGCACAGGTGTCATGGGAATGGCATaGGGGTTAATAACACAATACACTCAAAGAGCACCA +
Preference number: 3 (lower is better)
Translates to: RFLLCTGVMGMA*GLITQYTQRAP
Trigger: TGGTGCTCTTTGAGTGTATTGTGTTATTAACCCTCATGCCATTCCCATGACACCTGTGCATAGGAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp GGGCATGGTGTGGAGACAGGCAAGCTACATCACAAGTaGAATGATGTGTGGTTACCCTTTTTCAGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: GHGVETGKLHHK*NDVWLPFFSCF
Trigger: AAAACAACTGAAAAAGGGTAACCACACATCATTTCACTTGTGATGTAGCTTGCCTGTCTCCACACCATGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR GCA 72 bp TCCTCCAGCTGCGGTATTTTTGTAATTCTTAGGAACTaGAAAAAGATTCTTCCTGTTGCCGTAATGGAGGAC +
Preference number: 3 (lower is better)
Translates to: SSSCGIFVILRN*KKILPVAVMED
Trigger: GTCCTCCATTACGGCAACAGGAAGAATCTTTTTGCAGTTCCTAAGAATTACAAAAATACCGCAGCTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 72 bp AGTACTGGCCAGGTACTTTGTAGACTGTCCCCTTGTTaGGATTTGTCTGATGTTTTTCTCATGATTGGAATG +
Preference number: 3 (lower is better)
Translates to: STGQVLCRLSPC*DLSDVFLMIGM
Trigger: CATTCCAATCATGAGAAAAACATCAGACAAATCCCAACAAGGGGACAGTCTACAAAGTACCTGGCCAGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR-3UTR CAA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTGGGAGTTGGAGACATTaGGAAATCAGAAACGCACAG +
Preference number: 3 (lower is better)
Translates to: HEIKPGTENELRLEPSFFGSWRH*EIRNAQ
Trigger: CTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCC...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR TCA 72 bp TCTTTGAGACTCTCAAAGCTTCAGTTTGCTCATCCGTaGAAGGGAGCACATAACATATTTGCAAGAGATGCA +
Preference number: 3 (lower is better)
Translates to: SLRLSKLQFAHP*KGAHNIFARDA
Trigger: TGCATCTCTTGCAAATATGTTATGTGCTCCCTTTCACGGATGAGCAAACTGAAGCTTTGAGAGTCTCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CCA 72 bp TTTTATACGTCCTATGAAGGGAATATTCTGTCTAACTaGCTTGTTGTTGTCGATGTTGACCTTGATCACCTG +
Preference number: 3 (lower is better)
Translates to: FYTSYEGNILSN*LVVVDVDLDHL
Trigger: CAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGGACGTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp CAGATGTCCTCAAAGAACCCTTATGAAACGGTTTATTaGCTAACATGGAGTATGCAAAAATGTTTATGTGCC +
Preference number: 3 (lower is better)
Translates to: QMSSKNPYETVY*LTWSMQKCLCA
Trigger: GGCACATAAACATTTTTGCATACTCCATGTTAGTCAATAAACCGTTTCATAAGGGTTCTTTGAGGACATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp TTCCCTTTGAAGTCAGATGTCCTCAAAGAACCCTTATaGAACGGTTTATTGACTAACATGGAGTATGCAAAA +
Preference number: 3 (lower is better)
Translates to: FPLKSDVLKEPL*NGLLTNMEYAK
Trigger: TTTTGCATACTCCATGTTAGTCAATAAACCGTTTCATAAGGGTTCTTTGAGGACATCTGACTTCAAAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR TCA 72 bp TCTAGTTTTTATTTCAGTCTAGTAAAGAACATTCTTTaGGACTCTCAAAGCTTCAGTTTGCTCATCCGTGAA +
Preference number: 3 (lower is better)
Translates to: SSFYFSLVKNIL*DSQSFSLLIRE
Trigger: TTCACGGATGAGCAAACTGAAGCTTTGAGAGTCTCAAAGAATGTTCTTTACTAGACTGAAATAAAAACTAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCGTAGCAGCCGAGCGTaGGGTCGGCCTGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDRSSRA*GRPGGP
Trigger: TGGGCCCCCAGGCCGACCGCACGCTCGGCTGCTACG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCTCGCTGTCGTTGCCTaGGCTGGCCGTCAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDLAVVA*AGRQRR
Trigger: CCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGCGTGCGGTCGGCCTaGGGGCCCAGCTCGATGCTC +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPSVRSA*GPSSML
Trigger: GAGCATCGAGCTGGGCCCCCAGGCCGACCGCACGCT...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGCCACGACCACCGACTTaGGCCGGGCCTCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVPRPPT*AGPQTA
Trigger: CGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGG...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCACGACCACCGACTTaGGCCGGGCCTCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDPRPPT*AGPQTA
Trigger: CGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGCAGGCCAGCGTCTGTaGCCGGGGTCTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPAGQRL*PGSRTG
Trigger: ACCTGTGCGAGACCCCGGTCACAGACGCTGGCCTGC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTGCTGCTCTGCTGCTaGCGCAGCCTCTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPLLLCC*RSLWGS
Trigger: CGAGCCCCAGAGGCTGCGGCAGCAGCAGAGCAGCAG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTGGGCTCGCTGTCGTTaGCTGCGCTGGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDWARCR*LRWPSA
Trigger: CGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTTGGGCTCGCTGTCGTTaGCTGCGCTGGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSWARCR*LRWPSA
Trigger: CGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCA...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGGGGGCCCAGCTCGATaGTCATGGTGCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDGGPAR*SWCCRR
Trigger: CCGCCTGCAGCACCATGAGCATCGAGCTGGGCCCCC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGGGGCCCAGCTCGATaGTCATGGTGCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVGGPAR*SWCCRR
Trigger: CCGCCTGCAGCACCATGAGCATCGAGCTGGGCCCCC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGTGCAGTGGTCACATGTaGGGGGTGGCGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVCSGHM*GVAGVG
Trigger: CCCCACCCCCGCCACCCCCCACATGTGACCACTGCA...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCCAGCAGCGGCTTaGTCTCCTCGATCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDPPAAA*SPRSAG
Trigger: CCCGGCAGATCGAGGAGACCAAGCCGCTGCTGGGGG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR TCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGACAGCGTGGCTTCCTaGGACACCAGGTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDDSVAS*DTRSGL
Trigger: CAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGCGCCGGCTTGGCAGTaGTGGTGCGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDAPAWQ*WCVPPP
Trigger: TGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGGGGGCAGTGCCCTGTaGGGCCGTGCATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPGGSAL*GRACSE
Trigger: TTCAGAGCATGCACGGCCCCACAGGGCACTGCCCCC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCGGTCGCACGGCTGCTaGCAGCCGTTCCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDRSHGC*QPFRIS
Trigger: GGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCACACCAGGTCCGGGCTaGGGTGCAGAAGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPTPGPG*GAEGAE
Trigger: CTCTGCGCCTTCTGCACCCCAGCCCGGACCTGGTGT...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCACACCAGGTCCGGGCTaGGGTGCAGAAGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPTPGPG*GAEGAE
Trigger: CTCTGCGCCTTCTGCACCCCAGCCCGGACCTGGTGT...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGTCAGCGCCGGCTTaGCAGTGCTGGTGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDPSAPA*QCWCVP
Trigger: TGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCAGCCTGGGTTCCCCTTaGGGGAAGGGTTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPSLGSP*GKGWEA
Trigger: GGCCTCCCAACCCTTCCCCCAAGGGGAACCCAGGCT...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR CCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCCGGAAGGCGGAGGTCTaGGCCAAGCACTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: STREADPPRSSQQFSSAARKAEV*AKHSLH
Trigger: GTGGAGGGAGTGCTTGGCCCAGACCTCCGCCTTCCG...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCAGTGGGGCCTGGTTaGTGGAGTCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPPVGPG*WSHPAG
Trigger: CCCTGCAGGATGACTCCATCAACCAGGCCCCACTGG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCACGCTCAGCAGGCATaGGTGGACCTCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPHAQQA*VDLLPG
Trigger: CCCAGGCAAGAGGTCCACTCATGCCTGCTGAGCGTG...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGCACCTGGAGCATGGTaGGGTGTTCCGACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVAPGAW*GVPTGA
Trigger: GGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGATGCATGGGGCCACGTaGAGCACACGATGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVMHGAT*STRWQG
Trigger: CCCCTGCCATCGTGTGCTTCACGTGGCCCCATGCAT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGTTCCGGTCGCACGGCTaGTGGCAGCCGTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVFRSHG*WQPFRI
Trigger: AATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAA...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTTCCGGTCGCACGGCTaGTGGCAGCCGTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPFRSHG*WQPFRI
Trigger: AATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAA...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCGCGCCGGCTTGGCAGTaGTGGTGCGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTAPAWQ*WCVPPP
Trigger: TGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGC...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGGAACCAGCCATCTTTaGCGGCCCGCACGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPGTSHL*RPARSA
Trigger: TGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGTCCTTCAGCTCCCGCTaGCGGTCACACAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVSFSSR*RSHSCS
Trigger: CGAGCAGCTGTGTGACCGGCAGCGGGAGCTGAAGGA...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTCCTTCAGCTCCCGCTaGCGGTCACACAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDSFSSR*RSHSCS
Trigger: CGAGCAGCTGTGTGACCGGCAGCGGGAGCTGAAGGA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGCAGAGAGGCGGGCATaGATGGGGCCACGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPAERRA*MGPREA
Trigger: TGCTTCACGTGGCCCCATGCATGCCCGCCTCTCTGC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGCTCCTGCCTCTGACTaGGCTGTCCACGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPAPASD*AVHGIR
Trigger: CCTGATCCCGTGGACAGCGCAGTCAGAGGCAGGAGC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCGGTCGCACGGCTGCTaGCAGCCGTTCCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTRSHGC*QPFRIS
Trigger: GGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGCCGGCTTGGCAGTGCTaGTGCGTTCCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVPAWQC*CVPPPR
Trigger: ACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGG...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGTGCTGGTCACATCCATaGCCGCGCCGGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTCWSHP*PRRGRG
Trigger: CCCCCTCCCCCGGCGCGGCCATGGATGTGACCAGCA...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR TCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCACGCTCAGCAGGCATaGGTGGACCTCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTHAQQA*VDLLPG
Trigger: CCCAGGCAAGAGGTCCACTCATGCCTGCTGAGCGTG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCGCACCTGGAGCATGGTaGGGTGTTCCGACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTAPGAW*GVPTGA
Trigger: GGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGC...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACCTCGCTGTCGTTGCCTaGGCTGGCCGTCAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHLAVVA*AGRQRR
Trigger: CCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAG...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGCTCGCTGTCGTTGCCTaGGCTGGCCGTCAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAELAVVA*AGRQRR
Trigger: CCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAG...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGGGGGCCCAGCTCGATaGTCATGGTGCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTGGPAR*SWCCRR
Trigger: CCGCCTGCAGCACCATGAGCATCGAGCTGGGCCCCC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCTGCCGGTCACACAGCTaGTCGTACATGCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPCRSHS*SYMRFP
Trigger: GGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCA...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGACCCCAGGACCGGCTaGTCTGCGGCTGTTAGTCAA +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPDPRTG*SAAVSQ
Trigger: TTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGGAGGCCGTGTCTGCTaGTCCCTCATTAGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPGGRVC*SLISSE
Trigger: CTCCGAGCTAATGAGGGAGCAGCAGACACGGCCTCC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR GCA 90 bp CTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGTGTGTAATTAGGAGGCGCCCAGCAGTTCTCCTCTaGCGCCGCCGCTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LPAVLLCRRRSWCVIRRRPAVLL*RRRSWC
Trigger: ACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGG...GCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGGGCCTCAGACAGCGTaGCTTCCTGAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPGPQTA*LPETPG
Trigger: ACCTGGTGTCTCAGGAAGCCACGCTGTCTGAGGCCC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGCCACGTGGATCTCACTaGAGGCCACGACCACCGACT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVPRGSH*RPRPPT
Trigger: AGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGG...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCACGTGGATCTCACTaGAGGCCACGACCACCGACT +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPPRGSH*RPRPPT
Trigger: AGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCCACGTGGATCTCACTaGAGGCCACGACCACCGACT +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPPRGSH*RPRPPT
Trigger: AGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGG...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGTTCCACCTCCACGTaGATCTCACTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPRSTST*ISLEAT
Trigger: CGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTCGTTCCACCTCCACGTaGATCTCACTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSRSTST*ISLEAT
Trigger: CGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACG...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGTGTCGTTGCCTGCGCTaGCCGTCAGCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTCRCLR*PSAPAW
Trigger: CCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACA...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTAGCGTGCGGTCGGCCTaGGGGCCCAGCTCGATGCTC +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSVRSA*GPSSML
Trigger: GAGCATCGAGCTGGGCCCCCAGGCCGACCGCACGCT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGAATTCGGCGGGGGCTaGGCGTGCTTGTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFEFGGG*ACLWAP
Trigger: GGGGGCCCACAAGCACGCCCAGCCCCCGCCGAATTC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGGAATTCGGCGGGGGCTaGGCGTGCTTGTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAEEFGGG*ACLWAP
Trigger: GGGGGCCCACAAGCACGCCCAGCCCCCGCCGAATTC...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACGTACTACACGCCAGGTaGGGGCGGGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHVLHAR*GREGGG
Trigger: CCCACCGCCCTCCCGCCCCCACCTGGCGTGTAGTAC...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGGTACTACACGCCAGGTaGGGGCGGGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEVLHAR*GREGGG
Trigger: CCCACCGCCCTCCCGCCCCCACCTGGCGTGTAGTAC...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGACAGCGTGGCTTCCTaGGACACCAGGTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTDSVAS*DTRSGL
Trigger: CAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TTAGCTCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCCGCGCTCTGGGTCCTTaGGGGCAGGGCATCTACAGA +
Preference number: 4 (lower is better)
Translates to: LAPTRTTHSCSSDPAYPVRALGP*GQGIYR
Trigger: TCTGTAGATGCCCTGCCCTCAAGGACCCAGAGCGCG...GACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGAGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGTGGGCTCGCTGTCGTTaGCTGCGCTGGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREWARCR*LRWPSA
Trigger: CGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCA...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGCATGAGTGGACCTCTTaGCTGGGGTCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVHEWTS*LGSSAN
Trigger: GTTCGCCGAAGACCCCAGGCAAGAGGTCCACTCATG...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACACAGCTGCTCGTACATaGGCTTCCCCACGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDTAART*ASPRLC
Trigger: GCACAGACGTGGGGAAGCGCATGTACGAGCAGCTGT...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGCAGTTTGATGAGGTaGTCGGCGCAGGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVGSLMR*SAQALV
Trigger: AACCAGTGCCTGCGCCGAGCACCTCATCAAACTGCC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGCGGCGCCCATCTTCGTaGCTTCGGGGGCCGACACGT +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAERRPSS*LRGPTR
Trigger: ACGTGTCGGCCCCCGAAGGCACGAAGATGGGCGCCG...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTGGATCTGAGGAGTTaGAAGCCGCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPLDLRS*KPPPPP
Trigger: AGGAGGAGGAGGCGGCTTGCAACTCCTCAGATCCAG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR CCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACGGGGGCAGTGCCCTGTaGGGCCGTGCATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNGGSAL*GRACSE
Trigger: TTCAGAGCATGCACGGCCCCACAGGGCACTGCCCCC...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCGTTCCACCTCCACGTaGATCTCACTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTRSTST*ISLEAT
Trigger: CGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGCCGGCTTGGCAGTGCTaGTGCGTTCCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGPAWQC*CVPPPR
Trigger: ACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGG...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTAGTGGACCTCTTGCCTaGGGTCTTCGGCGAACCTCT +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSSGPLA*GLRRTS
Trigger: AGAGGTTCGCCGAAGACCCCAGGCAAGAGGTCCACT...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTCTCAGCAGGCATGAGTaGACCTCTTGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSLSRHE*TSCLGS
Trigger: AGACCCCAGGCAAGAGGTCCACTCATGCCTGCTGAG...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCTCAGCAGGCATGAGTaGACCTCTTGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDLSRHE*TSCLGS
Trigger: AGACCCCAGGCAAGAGGTCCACTCATGCCTGCTGAG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGGATGTGCACCATGCTaGCGAACAGCTCCCCGTCAT +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPGCAPC*RTAPRH
Trigger: ATGACGGGGAGCTGTTCGCCAGCATGGTGCACATCC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGGATGTGCACCATGCTaGCGAACAGCTCCCCGTCAT +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDGCAPC*RTAPRH
Trigger: ATGACGGGGAGCTGTTCGCCAGCATGGTGCACATCC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGCAGTGTTAGCCTGGTaGGCCCGCCTTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPAVLAW*ARLSFA
Trigger: TGCAAAGGAAAGGCGGGCCCACCAGGCTAACACTGC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGCAGTGTTAGCCTGGTaGGCCCGCCTTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDAVLAW*ARLSFA
Trigger: TGCAAAGGAAAGGCGGGCCCACCAGGCTAACACTGC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGAGGGCAGTGTTAGCCTaGTGGGCCCGCCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVRAVLA*WARLSF
Trigger: AAAGGAAAGGCGGGCCCACCAGGCTAACACTGCCCT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGCGTCTGTGGACTTaGAGGGCAGTGTTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPQRLWT*RAVLAW
Trigger: CCAGGCTAACACTGCCCTCCAAGTCCACAGACGCTG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGTGCAGAGACTCTTCATaGAGCTCAGGGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVCRDSS*SSGPAG
Trigger: GCCTGCTGGCCCTGAGCTCCATGAAGAGTCTCTGCA...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCTTCCTGCCTTGAGCTaGGAGCTTCACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPLPALS*ELHQAS
Trigger: CGAAGCCTGGTGAAGCTCCCAGCTCAAGGCAGGAAG...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCTTCCTGCCTTGAGCTaGGAGCTTCACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDLPALS*ELHQAS
Trigger: CGAAGCCTGGTGAAGCTCCCAGCTCAAGGCAGGAAG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGCAGCCCGGCCGGCTTaGTTTGTTGTTCTCAAACGG +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPAARPA*FVVLKR
Trigger: CCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGGGGCAGTGAGCAAGTaGGATGCTGGAGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDGAVSK*DAGAAR
Trigger: TCTAGCTGCTCCAGCATCCCACTTGCTCACTGCCCC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR CCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATCGCCCCATCCCCCAGTaGGGAGTCTCCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHRPIPQ*GVSLSW
Trigger: CCAGGACAAGGAGACTCCCCACTGGGGGATGGGGCG...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGTGTGTAATTAGGAGGCGCTGCCGCCGCCGCTCATaGTGTGTAATTAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LPAVLLCRRRSWCVIRRRCRRRS*CVIRRR
Trigger: GCGCCTCCTAATTACACACCATGAGCGGCGGCGGCA...GCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGACAGCGTGGCTTCCTaGGACACCAGGTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFDSVAS*DTRSGL
Trigger: CAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGGACAGCGTGGCTTCCTaGGACACCAGGTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAEDSVAS*DTRSGL
Trigger: CAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTC...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTGTAACAGGAGCCCATaGGGATGTGCACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPCNRSP*GCAPCW
Trigger: CCAGCATGGTGCACATCCTCATGGGCTCCTGTTACA...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTGTAACAGGAGCCCATaGGGATGTGCACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDCNRSP*GCAPCW
Trigger: CCAGCATGGTGCACATCCTCATGGGCTCCTGTTACA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCACCTGGAGCATGGTaGGGTGTTCCGACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTAPGAW*GVPTGA
Trigger: GGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACACAGGACGGGTGCAGTaGTGTGACTGGGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDTGRVQ*CDWVFL
Trigger: CAAGAAGACCCAGTCACATCACTGCACCCGTCCTGT...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTCCCAGGACAGCAGCTaGACGTCTTCAATTGCGCTG +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPSQDSS*TSSIAL
Trigger: CAGCGCAATTGAAGACGTTCAGCTGCTGTCCTGGGA...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCAAAGGCGTTGTATGGTaGAGCCCCGAGAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: STREADPPRSSQQFSSAAKGVVW*SPESLS
Trigger: AGACAGGCTCTCGGGGCTTCACCATACAACGCCTTT...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGGCTTGGCAGTGCTGGTaGGTTCCACCTCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGAWQCW*VPPPRG
Trigger: TCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGC...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACGGAACCAGCCATCTTTaGCGGCCCGCACGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNGTSHL*RPARSA
Trigger: TGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCC...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCGGTTGGGACAGGGGCTaGTGCCTCCCTGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLGWDRG*CLPGFE
Trigger: CTCAAATCCAGGGAGGCAGCAGCCCCTGTCCCAACC...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCGGAAGGACCTCGCTGTaGGCAGCACACACTAAAGGA +
Preference number: 4 (lower is better)
Translates to: STREADPPRSSQQFSSAAGRTSL*AAHTKG
Trigger: TCCTTTAGTGTGTGCTGCGCACAGCGAGGTCCTTCC...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGAACCTGAAGAACCTTTaGTCTGAACTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: GGSSSVLPAVLLCRRRSWNLKNL*SELQHG
Trigger: GCCATGCTGGAGTTCAGAGCAAAGGTTCTTCAGGTT...CCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTCGAGACGATTTCCAGTaGGGCCTGGTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSRDDFQ*GLVDGV
Trigger: GACTCCATCAACCAGGCCCCACTGGAAATCGTCTCG...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCCGAGACGATTTCCAGTaGGGCCTGGTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: STREADPPRSSQQFSSAARDDFQ*GLVDGV
Trigger: GACTCCATCAACCAGGCCCCACTGGAAATCGTCTCG...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCGAGACGATTTCCAGTaGGGCCTGGTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDRDDFQ*GLVDGV
Trigger: GACTCCATCAACCAGGCCCCACTGGAAATCGTCTCG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGAGACGATTTCCAGTaGGGCCTGGTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPRDDFQ*GLVDGV
Trigger: GACTCCATCAACCAGGCCCCACTGGAAATCGTCTCG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGCCACGTGGATCTCACTaGAGGCCACGACCACCGACT +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGPRGSH*RPRPPT
Trigger: AGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGG...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCTCAGCAGGCATGAGTaGACCTCTTGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTLSRHE*TSCLGS
Trigger: AGACCCCAGGCAAGAGGTCCACTCATGCCTGCTGAG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCACAGGATCTCCACCATaGTCTGGTTCCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPTGSPP*SGSPSV
Trigger: CACTGAGGGGGAACCAGACCATGGTGGAGATCCTGT...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACACAGGATCTCCACCATaGTCTGGTTCCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDTGSPP*SGSPSV
Trigger: CACTGAGGGGGAACCAGACCATGGTGGAGATCCTGT...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCACAGGTTCAGCACCTaGAGCATGGTGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPHRFST*SMVRCS
Trigger: GGAACACCTCACCATGCTCCAGGTGCTGAACCTGTG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCACCCCAACAGGCTCATaGCTTAGGCAGGCTAGGTAC +
Preference number: 4 (lower is better)
Translates to: STREADPPRSSQQFSSAATPTGS*LRQARY
Trigger: GTACCTAGCCTGCCTAAGCCATGAGCCTGTTGGGGT...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGCCAGTGGGGCCTGGTTaGTGGAGTCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEPVGPG*WSHPAG
Trigger: CCCTGCAGGATGACTCCATCAACCAGGCCCCACTGG...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGCAAGGATGTACTCCTaGGTAAACAGCCTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVARMYS*VNSLSR
Trigger: GCGACTGAGGCTGTTTACTCAGGAGTACATCCTTGC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGGGCCGTGCATGCTCTaGATGAACTTCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDGPCML*MNFFTT
Trigger: AGTGGTGAAGAAGTTCATTCAGAGCATGCACGGCCC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGAGTCTGACAGCAGCTTaGGGATTTCCACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVSLTAA*GFPRSS
Trigger: GCTGCTACGTGGAAATCCTCAAGCTGCTGTCAGACT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGGAATGGAATGGGTTaGAGCAAACTGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVGNGMG*SKLARD
Trigger: GTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTCACGCTCAGCAGGCATaGGTGGACCTCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFHAQQA*VDLLPG
Trigger: CCCAGGCAAGAGGTCCACTCATGCCTGCTGAGCGTG...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTGTGCTCTCCAGGGTTaGGATGATCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDCALQG*DDLQLG
Trigger: ACCCAACTGCAGATCATCTCAACCCTGGAGAGCACA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGGCAGGCCAGCGTCTGTaGCCGGGGTCTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVAGQRL*PGSRTG
Trigger: ACCTGTGCGAGACCCCGGTCACAGACGCTGGCCTGC...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGCTGAGCCCCACCTCGTaGGGGAGTTGGAGACATTTG +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGLSPTS*GSWRHL
Trigger: CAAATGTCTCCAACTCCCTCACGAGGTGGGGCTCAG...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGATGCATGGGGCCACGTaGAGCACACGATGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREMHGAT*STRWQG
Trigger: CCCCTGCCATCGTGTGCTTCACGTGGCCCCATGCAT...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGATGCATGGGGCCACGTaGAGCACACGATGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEMHGAT*STRWQG
Trigger: CCCCTGCCATCGTGTGCTTCACGTGGCCCCATGCAT...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGTCCGCGGGTGCCGGATaGCACAGACCTGAATGTCGC +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAESAGAG*HRPECR
Trigger: GCGACATTCAGGTCTGTGTCATCCGGCACCCGCGGA...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR GCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTCAGTGCCAGGAGCATaGAGGGACCCAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPSVPGA*RDPACF
Trigger: AAAACAAGCTGGGTCCCTGCATGCTCCTGGCACTGA...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTCCTTCAGCTCCCGCTaGCGGTCACACAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSFSSR*RSHSCS
Trigger: CGAGCAGCTGTGTGACCGGCAGCGGGAGCTGAAGGA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGACCACAGGTTCAGCTaGTTGAGCGAAGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPDHRFS*LSEGSL
Trigger: CAAACTGCCTTCGCTCAAGCAGCTGAACCTGTGGTC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTAAGGAGTGTCTTCGTTaGAGTGGTCACATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSKECLR*SGHMWG
Trigger: CCCCCACATGTGACCACTGCAACGAAGACACTCCTT...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AATGGCATTTGCTGCTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACAGCCTTTGCAGCTGCCTaGCCCATGCACCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NGICCCPWNDEGTPRGHTAFAAA*PMHPAC
Trigger: GCAGGCCGGGTGCATGGGGCAGGCAGCTGCAAAGGC...TGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATTGGGACAGGGGCTGCTaGCTCCCTGGATTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHWDRGC*LPGFEA
Trigger: TGCCTCAAATCCAGGGAGGCAGCAGCCCCTGTCCCA...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCACTTGCCATCGCTCTaGCAACTGTCAGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTHLPSL*QLSAEA
Trigger: TGCCTCTGCTGACAGTTGCCAGAGCGATGGCAAGTG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR CCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGCATAGCAGGAGTAGATaGCAGCCAGGCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGHSRSR*QPGTRP
Trigger: TGGCCGTGTGCCTGGCTGCCATCTACTCCTGCTATG...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGGGCGCAGAGGTAAAGTaGGCTTCCGGTCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEGAEVK*ASGRTA
Trigger: AGCCGTGCGACCGGAAGCCCACTTTACCTCTGCGCC...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCAAGTCAGCGTCTGTaGACTTGGAGGGCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPPSQRL*TWRAVL
Trigger: TAACACTGCCCTCCAAGTCCACAGACGCTGACTTGG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCCAAGTCAGCGTCTGTaGACTTGGAGGGCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPPSQRL*TWRAVL
Trigger: TAACACTGCCCTCCAAGTCCACAGACGCTGACTTGG...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTCGTCTCCAAACTGAGTaGACCACAGGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSRLQTE*TTGSAA
Trigger: AGCAGCTGAACCTGTGGTCCACTCAGTTTGGAGACG...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGCGTCTCCAAACTGAGTaGACCACAGGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVRLQTE*TTGSAA
Trigger: AGCAGCTGAACCTGTGGTCCACTCAGTTTGGAGACG...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCGTCTCCAAACTGAGTaGACCACAGGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDRLQTE*TTGSAA
Trigger: AGCAGCTGAACCTGTGGTCCACTCAGTTTGGAGACG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCACAGGTTCAGCACCTaGAGCATGGTGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTHRFST*SMVRCS
Trigger: GGAACACCTCACCATGCTCCAGGTGCTGAACCTGTG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACAGAAACGCACAGTGGTaGGTGGGGGAGTGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNRNAQW*VGEWAD
Trigger: GTCTGCCCACTCCCCCACCCACCACTGTGCGTTTCT...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGATCAGAAACGCACAGTaGTGGGTGGGGGAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGIRNAQ*WVGEWA
Trigger: TGCCCACTCCCCCACCCACCACTGTGCGTTTCTGAT...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACAGAGGCGGGCATGCATaGGGCCACGTGAAGCACACG +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHRGGHA*GHVKHT
Trigger: CGTGTGCTTCACGTGGCCCCATGCATGCCCGCCTCT...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGGGAGGGCAGTCGGACTaGCGGAGGCGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREGGQSD*RRRHIS
Trigger: AGAGATGTGTCGCCTCCGCCAGTCCGACTGCCCTCC...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGGGAGGGCAGTCGGACTaGCGGAGGCGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAEGGQSD*RRRHIS
Trigger: AGAGATGTGTCGCCTCCGCCAGTCCGACTGCCCTCC...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGCTTCCATCCCCGCGTTaGGCTCGTTCAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTLPSPR*ARSRQG
Trigger: TCCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAG...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGTCTTCGGCGAACCTCTaGATCACGTACTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVSSANL*ITYFSS
Trigger: GGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGA...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTCTTCGGCGAACCTCTaGATCACGTACTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPSSANL*ITYFSS
Trigger: GGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGA...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTCTCCAGGGTTGAGATaGTCTGCAGTTGGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTSPGLR*SAVGCR
Trigger: ACGACACCCAACTGCAGATCATCTCAACCCTGGAGA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTGTGCTCTCCAGGGTTaGGATGATCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTCALQG*DDLQLG
Trigger: ACCCAACTGCAGATCATCTCAACCCTGGAGAGCACA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGTTCGTAGGTGTCAGCTaGGAGCTTGGTGCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVFVGVS*ELGAVH
Trigger: ATGAACAGCACCAAGCTCTCAGCTGACACCTACGAA...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTTCGTAGGTGTCAGCTaGGAGCTTGGTGCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPFVGVS*ELGAVH
Trigger: ATGAACAGCACCAAGCTCTCAGCTGACACCTACGAA...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTTCCCCCAGGAATCGTaGGCTGTAAACAGTACTTCG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDFPQES*AVNSTS
Trigger: CGAAGTACTGTTTACAGCTCACGATTCCTGGGGGAA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACCTGAGCCCCACCTCGTaGGGGAGTTGGAGACATTTG +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNLSPTS*GSWRHL
Trigger: CAAATGTCTCCAACTCCCTCACGAGGTGGGGCTCAG...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGCGGATGACACAGACCTaGATGTCGCCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAERMTQT*MSPSCS
Trigger: GCTGCAGGAGGGCGACATTCAGGTCTGTGTCATCCG...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR GCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGCTTGGCAGTGCTGGTaGGTTCCACCTCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFAWQCW*VPPPRG
Trigger: TCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCTCGCTGTCGTTGCCTaGGCTGGCCGTCAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALLAVVA*AGRQRR
Trigger: CCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTCAGTGCCAGGAGCATaGAGGGACCCAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTSVPGA*RDPACF
Trigger: AAAACAAGCTGGGTCCCTGCATGCTCCTGGCACTGA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGGCAGTTTGATGAGGTaGTCGGCGCAGGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTGSLMR*SAQALV
Trigger: AACCAGTGCCTGCGCCGAGCACCTCATCAAACTGCC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCGACCACAGGTTCAGCTaGTTGAGCGAAGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTDHRFS*LSEGSL
Trigger: CAAACTGCCTTCGCTCAAGCAGCTGAACCTGTGGTC...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGGCAAATAATGGCATTTaGTGCTGTCCCTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: GGSSSVLPAVLLCRRRSWANNGI*CCPWND
Trigger: ATCATTCCAGGGACAGCAGCAAATGCCATTATTTGC...CCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp TGGTGGCCTGGAATGCAGGAGGGGAAAGAGTGTGATGCTGTCTCTGGCTCTACATGGCCTCAGGCTGCCTaGTCCTTAGCTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: WWPGMQEGKECDAVSGSTWPQAA*SLAPTR
Trigger: CCTGGTGGGAGCTAAGGAGCAGGCAGCCTGAGGCCA...TGTAGAGCCAGAGACAGCATCACACTCTTTCCCCTCCTGCATTCCAGGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCGAAGAGGCATTCCTCTaGCAAGTATGTCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLEEAFL*QVCPGG
Trigger: ACCCCCGGGACATACTTGGCAGAGGAATGCCTCTTC...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCATTTCCAGTGGGGCCTaGTTGATGGAGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTISSGA*LMESSC
Trigger: GCAGGATGACTCCATCAACCAGGCCCCACTGGAAAT...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGATTTCCTTCAGGCTTaGGGAATTGTCGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPDFLQA*GIVAAV
Trigger: AACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTGGGTTGAAGCAAACTaGCCAGAGACGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTWVEAN*PETVSS
Trigger: ACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGGGCAGTGTTAGCCTaGTGGGCCCGCCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TALLPGWTGEGGLAASHSRAVLA*WARLSF
Trigger: AAAGGAAAGGCGGGCCCACCAGGCTAACACTGCCCT...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGCAGCGTCTGTGGACTTaGAGGGCAGTGTTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTQRLWT*RAVLAW
Trigger: CCAGGCTAACACTGCCCTCCAAGTCCACAGACGCTG...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCATGCAGAGACTCTTCATaGAGCTCAGGGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TALLPGWTGEGGLAASHSCRDSS*SSGPAG
Trigger: GCCTGCTGGCCCTGAGCTCCATGAAGAGTCTCTGCA...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGAATTCGGCGGGGGCTaGGCGTGCTTGTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALEFGGG*ACLWAP
Trigger: GGGGGCCCACAAGCACGCCCAGCCCCCGCCGAATTC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTAGAATTCGGCGGGGGCTaGGCGTGCTTGTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLEFGGG*ACLWAP
Trigger: GGGGGCCCACAAGCACGCCCAGCCCCCGCCGAATTC...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCTTCCATTGCAGAGAATaGAACCACTGGTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPFHCRE*NHWSRR
Trigger: CCTGCGAGACCAGTGGTTCCATTCTCTGCAATGGAA...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAATCAGAAACGCACAGTaGTGGGTGGGGGAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TALLPGWTGEGGLAASHSIRNAQ*WVGEWA
Trigger: TGCCCACTCCCCCACCCACCACTGTGCGTTTCTGAT...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGTTTACCGGGGTGGACTaGAGAGGGCGGGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREFTGVD*RGRVSS
Trigger: GCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAA...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCTCTTTTACCGGGGTaGACTGGAGAGGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTALLPG*TGEGGL
Trigger: TAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGGAGCTCCCTGGGGGTaGGGAACAGCTCTTTTACCG +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFGAPWG*GTALLP
Trigger: CGGTAAAAGAGCTGTTCCCCACCCCCAGGGAGCTCC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTGTACCCAGTTGGCGTaGCGGACGCCAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFCTQLA*RTPGCC
Trigger: ACAACAGCCTGGCGTCCGCCACGCCAACTGGGTACA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR CCA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCCGGGGCCTCATGTTCTaGGCGCTGGGGTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GAVGDILFFRGMVWRQASRGLMF*ALGSGC
Trigger: ACACCCAGACCCCAGCGCCCAGAACATGAGGCCCCG...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCTACCTGTGGTCCCTGTaGCCACTTAGTGGACCTAGC +
Preference number: 4 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLYLWSL*PLSGPS
Trigger: GCTAGGTCCACTAAGTGGCCACAGGGACCACAGGTA...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCTGCTCACATGTGATTGGGAATaGGCCCTGGCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WLSTTCDWEWALASGCLLTCDWE*ALASGC
Trigger: GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGT...GAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCCCACCAGTACAACATGTGATTaGGAATGGGCCCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SHQDHPQLLIRPCLSRPTSTTCD*EWALAS
Trigger: TGAGGCCAGGGCCCATTCCCAATCACATGTTGTACT...GGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGTGTGTAATTAGGAGGCGCGGAGTCTCCTTGTCCTaGAGAAAGAACTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LPAVLLCRRRSWCVIRRRGVSLS*RKNCTG
Trigger: CCCTGTGCAGTTCTTTCTCCAGGACAAGGAGACTCC...GCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGTGCATGCTCTGAATaGACTTCTTCACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPRACSE*TSSPLP
Trigger: TGGAAGTGGTGAAGAAGTTCATTCAGAGCATGCACG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCACTTCAGTTCCTTGGTaGACTTCTCATGTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPTSVPW*TSHVRE
Trigger: CTCTCGCACATGAGAAGTTCACCAAGGAACTGAAGT...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGACTTCAGTTCCTTGGTaGACTTCTCATGTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVTSVPW*TSHVRE
Trigger: CTCTCGCACATGAGAAGTTCACCAAGGAACTGAAGT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACTGTAACAGGAGCCCATaGGGATGTGCACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNCNRSP*GCAPCW
Trigger: CCAGCATGGTGCACATCCTCATGGGCTCCTGTTACA...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGCAGGCCAGCGTCTGTaGCCGGGGTCTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTAGQRL*PGSRTG
Trigger: ACCTGTGCGAGACCCCGGTCACAGACGCTGGCCTGC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCATCCCAGGACAGCAGCTaGACGTCTTCAATTGCGCTG +
Preference number: 4 (lower is better)
Translates to: TALLPGWTGEGGLAASHSSQDSS*TSSIAL
Trigger: CAGCGCAATTGAAGACGTTCAGCTGCTGTCCTGGGA...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACTCCCAGGACAGCAGCTaGACGTCTTCAATTGCGCTG +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNSQDSS*TSSIAL
Trigger: CAGCGCAATTGAAGACGTTCAGCTGCTGTCCTGGGA...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTTCCCCCAGGAATCGTaGGCTGTAAACAGTACTTCG +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTFPQES*AVNSTS
Trigger: CGAAGTACTGTTTACAGCTCACGATTCCTGGGGGAA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGACCTGGCACGGAAAATaGATTAAGACTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVTWHGK*IKTGTQ
Trigger: CTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGCGCACCAGAGTGCTGTaGAGTATGGGACCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVRTRVL*SMGPEG
Trigger: CCCCTCCGGTCCCATACTTCACAGCACTCTGGTGCG...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGCTCTGCTGCTCTGCTaGTGCCGCAGCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALALLLC*CRSLWG
Trigger: GCCCCAGAGGCTGCGGCAGCAGCAGAGCAGCAGAGC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp GTGACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCACTCGCTGTCGTTGCCTaGGCTGGCCGTCAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: VTVVLTIRKSNSARGKVALAVVA*AGRQRR
Trigger: CCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAG...TGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR GCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGGGGGCCCAGCTCGATaGTCATGGTGCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTGGPAR*SWCCRR
Trigger: CCGCCTGCAGCACCATGAGCATCGAGCTGGGCCCCC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGGTGAACTTCTCATGTaGGAGAGCTTCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPGELLM*ESFFGE
Trigger: TTCCCCAAAGAAGCTCTCGCACATGAGAAGTTCACC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACCATGAGTGGACCTCTTaGCTGGGGTCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHHEWTS*LGSSAN
Trigger: GTTCGCCGAAGACCCCAGGCAAGAGGTCCACTCATG...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCACCCAGCTTGTTTTCTaGCAGGGAGAGCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPTQLVF*QGEQEF
Trigger: AAATTCCTGCTCTCCCTGGCAGAAAACAAGCTGGGT...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTACCCAGCTTGTTTTCTaGCAGGGAGAGCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSTQLVF*QGEQEF
Trigger: AAATTCCTGCTCTCCCTGGCAGAAAACAAGCTGGGT...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGAGGGTTGAGATGATCTaGAGTTGGGTGTCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVRVEMI*SWVSLL
Trigger: CAACAACGACACCCAACTGCAGATCATCTCAACCCT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGCAAACGGTTATGCCATaGACGCCCAGCCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTQTVMP*TPSPSK
Trigger: CTTGGATGGGCTGGGCGTGCATGGCATAACCGTTTG...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS-3UTR GCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGCTTCCCGCACCAGAGTaGTGTGAAGTATGGGACCGG +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAELPAPE*CEVWDR
Trigger: CCGGTCCCATACTTCACAGCACTCTGGTGCGGGAAG...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GTGACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCAAGCTCGTCGGGTGCATaGTCGCGGCGGCTGACCGGG +
Preference number: 4 (lower is better)
Translates to: VTVVLTIRKSNSARGKVASSSGA*SRRLTG
Trigger: CCCGGTCAGCCGCCGCGAGCATGCACCCGACGAGCT...TGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTTGGTCTCCTCGATCTaGCGGGGGTCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSLVSSI*RGSPPP
Trigger: CGGCGGCGGCGACCCCCGGCAGATCGAGGAGACCAA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR GCA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCCACACACTAAAGGAGTaGAAAGTCGCGCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLHTLKE*KVALWV
Trigger: GACCCAGAGCGCGACTTTGCACTCCTTTAGTGTGTG...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCATTTCCAGTGGGGCCTaGTTGATGGAGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GGWLSTTCDWEWALASGCISSGA*LMESSC
Trigger: GCAGGATGACTCCATCAACCAGGCCCCACTGGAAAT...GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCAGATCTGGTGGTGGGTaGTTGTTTTCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: STREADPPRSSQQFSSAARSGGG*LFSSKG
Trigger: TCCTTTGCTGGAAAACAACCACCCACCACCAGATCT...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGCATAGCAGGAGTAGATaGCAGCCAGGCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEHSRSR*QPGTRP
Trigger: TGGCCGTGTGCCTGGCTGCCATCTACTCCTGCTATG...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCGATTTCCTTCAGGCTTaGGGAATTGTCGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTDFLQA*GIVAAV
Trigger: AACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATC...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTGTCGTTGCCTGCGCTaGCCGTCAGCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALCRCLR*PSAPAW
Trigger: CCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAAGCGTGCGGTCGGCCTaGGGGCCCAGCTCGATGCTC +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKSVRSA*GPSSML
Trigger: GAGCATCGAGCTGGGCCCCCAGGCCGACCGCACGCT...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACAGCGTGCGGTCGGCCTaGGGGCCCAGCTCGATGCTC +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNSVRSA*GPSSML
Trigger: GAGCATCGAGCTGGGCCCCCAGGCCGACCGCACGCT...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGTGCGAGAGCTTCTTTaGGGAATGGAATGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPVRELL*GMEWVE
Trigger: TTCAACCCATTCCATTCCCCAAAGAAGCTCTCGCAC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGTGCGAGAGCTTCTTTaGGGAATGGAATGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDVRELL*GMEWVE
Trigger: TTCAACCCATTCCATTCCCCAAAGAAGCTCTCGCAC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACAGTGGACCTCTTGCCTaGGGTCTTCGGCGAACCTCT +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHSGPLA*GLRRTS
Trigger: AGAGGTTCGCCGAAGACCCCAGGCAAGAGGTCCACT...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTAGTGGACCTCTTGCCTaGGGTCTTCGGCGAACCTCT +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSGPLA*GLRRTS
Trigger: AGAGGTTCGCCGAAGACCCCAGGCAAGAGGTCCACT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGCTCAGCAGGCATGAGTaGACCTCTTGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCRELSRHE*TSCLGS
Trigger: AGACCCCAGGCAAGAGGTCCACTCATGCCTGCTGAG...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGGGATGTGCACCATGCTaGCGAACAGCTCCCCGTCAT +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREGCAPC*RTAPRH
Trigger: ATGACGGGGAGCTGTTCGCCAGCATGGTGCACATCC...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGAGATGATCTGCAGTTaGGTGTCGTTGTTGTCGATG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDEMICS*VSLLSM
Trigger: CATCGACAACAACGACACCCAACTGCAGATCATCTC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGGCAGTGTTAGCCTGGTaGGCCCGCCTTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAEAVLAW*ARLSFA
Trigger: TGCAAAGGAAAGGCGGGCCCACCAGGCTAACACTGC...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGTACTACACGCCAGGTaGGGGCGGGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNVLHAR*GREGGG
Trigger: CCCACCGCCCTCCCGCCCCCACCTGGCGTGTAGTAC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGATCAGAAACGCACAGTaGTGGGTGGGGGAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEIRNAQ*WVGEWA
Trigger: TGCCCACTCCCCCACCCACCACTGTGCGTTTCTGAT...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGCCGAGAGAAAGAGCTTaGGCCTTAGTGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTPRERA*ALVEQG
Trigger: CCCTTGCTCCACTAAGGCCCAAGCTCTTTCTCTCGG...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCACCGAGAGAAAGAGCTTaGGCCTTAGTGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TALLPGWTGEGGLAASHSPRERA*ALVEQG
Trigger: CCCTTGCTCCACTAAGGCCCAAGCTCTTTCTCTCGG...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGGGAGGGCAGTCGGACTaGCGGAGGCGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVGGQSD*RRRHIS
Trigger: AGAGATGTGTCGCCTCCGCCAGTCCGACTGCCCTCC...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCAAGCCAGAGAGCGGTTaGGACAGGGGCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCKPESG*DRGCCL
Trigger: GAGGCAGCAGCCCCTGTCCCAACCGCTCTCTGGCTT...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TTAGCTCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCGGGGTGATGGGTTACTaGGAGGAAGACCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: LAPTRTTHSCSSDPAYPVGVMGY*EEDHRG
Trigger: ACCTCTATGGTCTTCCTCCCAGTAACCCATCACCCC...GACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGAGACTGTCCCCTTGTTaGGATTTGTCTGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: GGSSSVLPAVLLCRRRSWRLSPC*DLSDVF
Trigger: AAAAACATCAGACAAATCCCAACAAGGGGACAGTCT...CCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTTATTCCTACCTGTaGTCCCTGTGGCCACTTAGT +
Preference number: 4 (lower is better)
Translates to: SHQDHPQLLIRPCLSRPTSYSYL*SLWPLS
Trigger: ACTAAGTGGCCACAGGGACCACAGGTAGGAATAAGA...GGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCTTGGTAGTGGTGGCCTaGAATGCAGGAGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLLVVVA*NAGGER
Trigger: TCTTTCCCCTCCTGCATTCCAGGCCACCACTACCAA...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGCAAGTTTGTGTTCTCTaGGAGCAGTTTCGAGACGAT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVQVCVL*EQFRDD
Trigger: ATCGTCTCGAAACTGCTCTCAGAGAACACAAACTTG...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACGGGCCGTGCATGCTCTaGATGAACTTCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNGPCML*MNFFTT
Trigger: AGTGGTGAAGAAGTTCATTCAGAGCATGCACGGCCC...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGACAGCGTGGCTTCCTaGGACACCAGGTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALDSVAS*DTRSGL
Trigger: CAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCCACGACCACCGACTTaGGCCGGGCCTCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSPRPPT*AGPQTA
Trigger: CGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACTGTAACAGGAGCCCATaGGGATGTGCACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHCNRSP*GCAPCW
Trigger: CCAGCATGGTGCACATCCTCATGGGCTCCTGTTACA...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGTGTGCTCTCCAGGGTTaGGATGATCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTCALQG*DDLQLG
Trigger: ACCCAACTGCAGATCATCTCAACCCTGGAGAGCACA...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGCAGGCCAGCGTCTGTaGCCGGGGTCTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKAGQRL*PGSRTG
Trigger: ACCTGTGCGAGACCCCGGTCACAGACGCTGGCCTGC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTACGGGTGCAGTGATGTaGCTGGGTCTTCTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFTGAVM*LGLLVP
Trigger: TGGGACAAGAAGACCCAGTCACATCACTGCACCCGT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGACGGGTGCAGTGATGTaGCTGGGTCTTCTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAETGAVM*LGLLVP
Trigger: TGGGACAAGAAGACCCAGTCACATCACTGCACCCGT...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCATGATTGGAATGGGGTaGTGGGTTACTGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLMIGMG*WVTGRK
Trigger: CTTCCTCCCAGTAACCCATCACCCCATTCCAATCAT...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGGGCTGCTGCTCTGCTaGTCTGCTGCTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNGLLLC*SAAAAA
Trigger: GGCTGCGGCAGCAGCAGAGCAGCAGAGCAGCAGCCC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp GGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCGGCCGCTCTCTGCAGTaGTTGCAAAAGAATTCACAG +
Preference number: 4 (lower is better)
Translates to: GGWLSTTCDWEWALASGCGRSLQ*LQKNSQ
Trigger: CTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCC...GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAATGGGCTCGCTGTCGTTaGCTGCGCTGGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKWARCR*LRWPSA
Trigger: CGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCA...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTGGGCTCGCTGTCGTTaGCTGCGCTGGCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSWARCR*LRWPSA
Trigger: CGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACGACCACAGGTTCAGCTaGTTGAGCGAAGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNDHRFS*LSEGSL
Trigger: CAAACTGCCTTCGCTCAAGCAGCTGAACCTGTGGTC...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCAGCTGAGAGCTTGGTaGTGTTCATGTTTAAACTGC +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDQLRAW*CSCLNC
Trigger: GCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGCAGCTGAGAGCTTGGTaGTGTTCATGTTTAAACTGC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVQLRAW*CSCLNC
Trigger: GCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTG...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCTTATTTTGTCGCGGTTaGAAACGTCTTCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPLFCRG*KRLPAL
Trigger: CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAA...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTAGGACACAGGACGGGTaGAGTGATGTGACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFRTQDG*SDVTGS
Trigger: AGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGAAGGAGTGTCTTCGTTaGAGTGGTCACATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTKECLR*SGHMWG
Trigger: CCCCCACATGTGACCACTGCAACGAAGACACTCCTT...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGTGTACCTCATCCCGTTaGAAAGCAGAAGAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAECTSSR*KAEEPG
Trigger: GCCGGGCTCTTCTGCTTTGCAACGGGATGAGGTACA...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR GCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGCCAGCGTTAGGTGGTaGGGCTCCCAGCGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNASVRW*GSQRLR
Trigger: CCTGAGGCGCTGGGAGCCGCACCACCTAACGCTGGC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR GCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATTCCTGGAGAAAGAACTaGACAGGGTGTCCCTATCCC +
Preference number: 4 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHSWRKN*TGCPYP
Trigger: GGGATAGGGACACCCTGTGCAGTTCTTTCTCCAGGA...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp ATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCCTATGCACAGGTGTCATGGGAAGGTGGGATCTGGGTaGGTTAAAGCATCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: IPSHLSGSQIPPMHRCHGKVGSG*VKASPD
Trigger: GTCTGGGGATGCTTTAACGCACCCAGATCCCACCTT...CCCATGACACCTGTGCATAGGAGGAATCTGGGACCCAGAGAGGTGGGACGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp ATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCCTATGCACAGGTGTCATGGGAGCAGTCACTGTTCATaGCACCCCAACAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: IPSHLSGSQIPPMHRCHGSSHCS*HPNRLM
Trigger: CATGAGCCTGTTGGGGTGGCATGAACAGTGACTGCT...CCCATGACACCTGTGCATAGGAGGAATCTGGGACCCAGAGAGGTGGGACGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCCTTAAGGAGAAACACTaGATTTGGGGTGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: STREADPPRSSQQFSSAALKEKH*IWGEEQ
Trigger: CTGCTCTTCACCCCAAATGCAGTGTTTCTCCTTAAG...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACATTTCCAGTGGGGCCTaGTTGATGGAGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNISSGA*LMESSC
Trigger: GCAGGATGACTCCATCAACCAGGCCCCACTGGAAAT...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGATTTCCAGTGGGGCCTaGTTGATGGAGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTISSGA*LMESSC
Trigger: GCAGGATGACTCCATCAACCAGGCCCCACTGGAAAT...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTCGAGACGATTTCCAGTaGGGCCTGGTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFRDDFQ*GLVDGV
Trigger: GACTCCATCAACCAGGCCCCACTGGAAATCGTCTCG...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCAGATCTGGTGGTGGGTaGTTGTTTTCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTRSGGG*LFSSKG
Trigger: TCCTTTGCTGGAAAACAACCACCCACCACCAGATCT...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTGAATTCACAGAGATCTaGTGGTGGGTGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSEFTEI*WWVVVF
Trigger: GAAAACAACCACCCACCACCAGATCTCTGTGAATTC...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCGGTCGCACGGCTGCTaGCAGCCGTTCCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALRSHGC*QPFRIS
Trigger: GGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGCGCAGAGGTAAAGTaGGCTTCCGGTCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: HLVRELETFGNQKRTVVGGAEVK*ASGRTA
Trigger: AGCCGTGCGACCGGAAGCCCACTTTACCTCTGCGCC...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCCGTCAGCGCCGGCTTaGCAGTGCTGGTGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALPSAPA*QCWCVP
Trigger: TGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTGTCGTTGCCTGCGCTaGCCGTCAGCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSCRCLR*PSAPAW
Trigger: CCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACAGGATCTCCACCATaGTCTGGTTCCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHTGSPP*SGSPSV
Trigger: CACTGAGGGGGAACCAGACCATGGTGGAGATCCTGT...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACCACAGGTTCAGCACCTaGAGCATGGTGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHHRFST*SMVRCS
Trigger: GGAACACCTCACCATGCTCCAGGTGCTGAACCTGTG...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTCACAGGTTCAGCACCTaGAGCATGGTGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFHRFST*SMVRCS
Trigger: GGAACACCTCACCATGCTCCAGGTGCTGAACCTGTG...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCACTTCCTTCAAATTaGGAAGCTTGGCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDPLPSN*EAWPSD
Trigger: ATCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCACTTCCTTCAAATTaGGAAGCTTGGCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPPLPSN*EAWPSD
Trigger: ATCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACCTCGCAGGTAGCTATTaGCAGCCTGCAGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNLAGSY*QPAVRQ
Trigger: CTGTCTTACTGCAGGCTGCCAATAGCTACCTGCGAG...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTGCAGTGGTCACATGTaGGGGGTGGCGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSCSGHM*GVAGVG
Trigger: CCCCACCCCCGCCACCCCCCACATGTGACCACTGCA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACTGCAGTGGTCACATGTaGGGGGTGGCGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNCSGHM*GVAGVG
Trigger: CCCCACCCCCGCCACCCCCCACATGTGACCACTGCA...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGAAAAGAAACGGAGGTTaGTTTGTCTTCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVKRNGG*FVFGAG
Trigger: ACCTGCTCCGAAGACAAACCAACCTCCGTTTCTTTT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AATGGCATTTGCTGCTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACACTGGGGTCTGGGTGTTaGGGCAGGGTGACTCACCAT +
Preference number: 4 (lower is better)
Translates to: NGICCCPWNDEGTPRGHTLGSGC*GRVTHH
Trigger: ATGGTGAGTCACCCTGCCCCAACACCCAGACCCCAG...TGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CAA 72 bp GCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTaGACTTTTCCCACACGACGGCATCAAACACAAAGG +
Preference number: 4 (lower is better)
Translates to: ASFVRPAMVASE*TFPTRRHQTQR
Trigger: CCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCAAGTTTGTGTTCTCTaGGAGCAGTTTCGAGACGAT +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTQVCVL*EQFRDD
Trigger: ATCGTCTCGAAACTGCTCTCAGAGAACACAAACTTG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGGGCCGTGCATGCTCTaGATGAACTTCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFGPCML*MNFFTT
Trigger: AGTGGTGAAGAAGTTCATTCAGAGCATGCACGGCCC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTAGTCTGACAGCAGCTTaGGGATTTCCACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSLTAA*GFPRSS
Trigger: GCTGCTACGTGGAAATCCTCAAGCTGCTGTCAGACT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCACGCTCAGCAGGCATaGGTGGACCTCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALHAQQA*VDLLPG
Trigger: CCCAGGCAAGAGGTCCACTCATGCCTGCTGAGCGTG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTGTCGTTGTTGTCGATaGTGTTGTATTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDCRCCR*CCIPAS
Trigger: TGATGCTGGAATACAACATCATCGACAACAACGACA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCTGTCGTTGTTGTCGATaGTGTTGTATTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PPERLPIYLTARAPGWDPCRCCR*CCIPAS
Trigger: TGATGCTGGAATACAACATCATCGACAACAACGACA...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTCTCCAGGGTTGAGATaGTCTGCAGTTGGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSPGLR*SAVGCR
Trigger: ACGACACCCAACTGCAGATCATCTCAACCCTGGAGA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGCACCTGGAGCATGGTaGGGTGTTCCGACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALAPGAW*GVPTGA
Trigger: GGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTACCCTCCCCGACCCGCTaGTGCTCCTCTTGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLPSPTR*CSSCCY
Trigger: GTAGCAACAAGAGGAGCATCAGCGGGTCGGGGAGGG...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGTGCGCTGTAGGAGACTaGGTTTTCCATGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTCAVGD*VFHVPS
Trigger: ACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCA...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCATAAAACAAGTACACTaGCTGTGGGGTAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPIKQVH*LWGRFG
Trigger: TCCAAACCTACCCCACAGTCAGTGTACTTGTTTTAT...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCCTGCCTCCCTGGATTTaGGGCAGAGTTAGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GAVGDILFFRGMVWRQASLPPWI*GRVSSA
Trigger: GGCGGAACTAACTCTGCCTCAAATCCAGGGAGGCAG...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp TCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCCCACCAAGCTACATCACAAGTaGAATGATGTGTGGTTACCC +
Preference number: 4 (lower is better)
Translates to: SHQDHPQLLIRPCLSRPTKLHHK*NDVWLP
Trigger: GGGTAACCACACATCATTTCACTTGTGATGTAGCTT...GGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGCTGCTCTGCTGCTCTaGTGCTGCCGCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKAALLL*CCRSLW
Trigger: CCAGAGGCTGCGGCAGCAGCAGAGCAGCAGAGCAGC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGGCCGCTCTCTGCAGTaGTTGCAAAAGAATTCACAG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTGRSLQ*LQKNSQ
Trigger: CTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTTCCGGTCGCACGGCTaGTGGCAGCCGTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALFRSHG*WQPFRI
Trigger: AATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGCGCCGGCTTGGCAGTaGTGGTGCGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKAPAWQ*WCVPPP
Trigger: TGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGCGCCGGCTTGGCAGTaGTGGTGCGTTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNAPAWQ*WCVPPP
Trigger: TGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCGTAGCAGCCGAGCGTaGGGTCGGCCTGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNRSSRA*GRPGGP
Trigger: TGGGCCCCCAGGCCGACCGCACGCTCGGCTGCTACG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGGAACCAGCCATCTTTaGCGGCCCGCACGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTGTSHL*RPARSA
Trigger: TGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTAGGAACCAGCCATCTTTaGCGGCCCGCACGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLGTSHL*RPARSA
Trigger: TGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCC...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGACCCAGCTTGTTTTCTaGCAGGGAGAGCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGTQLVF*QGEQEF
Trigger: AAATTCCTGCTCTCCCTGGCAGAAAACAAGCTGGGT...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTCAGTGCCAGGAGCATaGAGGGACCCAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSVPGA*RDPACF
Trigger: AAAACAAGCTGGGTCCCTGCATGCTCCTGGCACTGA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGACAGCTGCTCGTACATaGGCTTCCCCACGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVTAART*ASPRLC
Trigger: GCACAGACGTGGGGAAGCGCATGTACGAGCAGCTGT...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTCCTTCAGCTCCCGCTaGCGGTCACACAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALSFSSR*RSHSCS
Trigger: CGAGCAGCTGTGTGACCGGCAGCGGGAGCTGAAGGA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGACCACAGGTTCAGCTaGTTGAGCGAAGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFDHRFS*LSEGSL
Trigger: CAAACTGCCTTCGCTCAAGCAGCTGAACCTGTGGTC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCAGCTGAGAGCTTGGTaGTGTTCATGTTTAAACTGC +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTQLRAW*CSCLNC
Trigger: GCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGTTGCAAACGTCTTCCTaGCTTGAGCTGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTLQTSS*LELGAS
Trigger: TGAAGCTCCCAGCTCAAGGCAGGAAGACGTTTGCAA...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGACCCCAGGACCGGCTaGTCTGCGGCTGTTAGTCAA +
Preference number: 4 (lower is better)
Translates to: HLVRELETFGNQKRTVVGDPRTG*SAAVSQ
Trigger: TTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTC...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATCATATTTGCAAGAGATaGACCCAGAATGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHHICKR*TQNGGA
Trigger: GGCTCCCCCATTCTGGGTGCATCTCTTGCAAATATG...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGATTTCCAGTGGGGCCTaGTTGATGGAGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEISSGA*LMESSC
Trigger: GCAGGATGACTCCATCAACCAGGCCCCACTGGAAAT...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTTTCATGCTCCTGGGTaGTCAAGTTTGTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTFHAPG*SSLCSL
Trigger: CAGAGAACACAAACTTGACCACCCAGGAGCATGAAA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGATGTTTTCATGCTCCTaGGTGGTCAAGTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVMFSCS*VVKFVF
Trigger: GAACACAAACTTGACCACCCAGGAGCATGAAAACAT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCGAATTCACAGAGATCTaGTGGTGGGTGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTEFTEI*WWVVVF
Trigger: GAAAACAACCACCCACCACCAGATCTCTGTGAATTC...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAACGGTCGCACGGCTGCTaGCAGCCGTTCCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKRSHGC*QPFRIS
Trigger: GGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCG...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGGCGCAGAGGTAAAGTaGGCTTCCGGTCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALGAEVK*ASGRTA
Trigger: AGCCGTGCGACCGGAAGCCCACTTTACCTCTGCGCC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACACACCAGGTCCGGGCTaGGGTGCAGAAGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNTPGPG*GAEGAE
Trigger: CTCTGCGCCTTCTGCACCCCAGCCCGGACCTGGTGT...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCCGGCTTGGCAGTGCTaGTGCGTTCCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALPAWQC*CVPPPR
Trigger: ACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGAGCTTCTTTGGGGAATaGAATGGGTTGAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVSFFGE*NGLKQT
Trigger: AGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGCAGCGTCTGTGGACTTaGAGGGCAGTGTTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVQRLWT*RAVLAW
Trigger: CCAGGCTAACACTGCCCTCCAAGTCCACAGACGCTG...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGCGTCTCCAAACTGAGTaGACCACAGGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCRERLQTE*TTGSAA
Trigger: AGCAGCTGAACCTGTGGTCCACTCAGTTTGGAGACG...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGCTTCCTGCCTTGAGCTaGGAGCTTCACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVLPALS*ELHQAS
Trigger: CGAAGCCTGGTGAAGCTCCCAGCTCAAGGCAGGAAG...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACTTCCATGTACCCAGTTaGCTCAGCAGCCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHFHVPS*LSSLSH
Trigger: ATGGGACAGGCTGCTGAGCCAACTGGGTACATGGAA...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGCTCGCAGGTAGCTATTaGCAGCCTGCAGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCRELAGSY*QPAVRQ
Trigger: CTGTCTTACTGCAGGCTGCCAATAGCTACCTGCGAG...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCATTCCATTGCAGAGAATaGAACCACTGGTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: TALLPGWTGEGGLAASHSFHCRE*NHWSRR
Trigger: CCTGCGAGACCAGTGGTTCCATTCTCTGCAATGGAA...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCGAGATGCACCCAGAATaGGGGAGCCCCCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCEMHPE*GSPQIP
Trigger: TGGGATTTGGGGGCTCCCCCATTCTGGGTGCATCTC...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACCCAGTGGGGCCTGGTTaGTGGAGTCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNPVGPG*WSHPAG
Trigger: CCCTGCAGGATGACTCCATCAACCAGGCCCCACTGG...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCCAGTGGGGCCTGGTTaGTGGAGTCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSPVGPG*WSHPAG
Trigger: CCCTGCAGGATGACTCCATCAACCAGGCCCCACTGG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACACCACGACCACCGACTTaGGCCGGGCCTCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTPRPPT*AGPQTA
Trigger: CGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGG...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACTTCAGTTCCTTGGTaGACTTCTCATGTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNTSVPW*TSHVRE
Trigger: CTCTCGCACATGAGAAGTTCACCAAGGAACTGAAGT...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTCTTCGGCGAACCTCTaGATCACGTACTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSSANL*ITYFSS
Trigger: GGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCACGCTCAGCAGGCATaGGTGGACCTCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSHAQQA*VDLLPG
Trigger: CCCAGGCAAGAGGTCCACTCATGCCTGCTGAGCGTG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGCACCTGGAGCATGGTaGGGTGTTCCGACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNAPGAW*GVPTGA
Trigger: GGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTTCGTAGGTGTCAGCTaGGAGCTTGGTGCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFFVGVS*ELGAVH
Trigger: ATGAACAGCACCAAGCTCTCAGCTGACACCTACGAA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGTGCGCTGTAGGAGACTaGGTTTTCCATGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAECAVGD*VFHVPS
Trigger: ACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCA...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGTGCGCTGTAGGAGACTaGGTTTTCCATGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAECAVGD*VFHVPS
Trigger: ACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCA...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCGCACCAGAGTGCTGTaGAGTATGGGACCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSRTRVL*SMGPEG
Trigger: CCCCTCCGGTCCCATACTTCACAGCACTCTGGTGCG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTCCTGCTCCTGCCTCTaGCTGCGCTGTCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSSCSCL*LRCPRD
Trigger: ATCCCGTGGACAGCGCAGTCAGAGGCAGGAGCAGGA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGTCCGGCTCTGGATCTaGGGAGTTGCAAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSVRLWI*GVASRL
Trigger: GAGGCGGCTTGCAACTCCTCAGATCCAGAGCCGGAC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR TCA 90 bp CCTCTGCCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTGACAAGTTAAGGTCCGGAAGGGGCTGTAGGTaGTATACTATTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLPSMSRGCGSAIDKLRSGRGCR*YTILQG
Trigger: CCCCTGAAGAATAGTATATCACCTACAGCCCCTTCC...GGACCTTAACTTGTCAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp TGGTGGCCTGGAATGCAGGAGGGGAAAGAGTGTGATGCTGTCTCTGGCTCTACAGTGTGGCTCTGCCATTaGCAAGTTAAGGTCCTTCGC +
Preference number: 4 (lower is better)
Translates to: WWPGMQEGKECDAVSGSTVWLCH*QVKVLR
Trigger: GCGAAGGACCTTAACTTGTCAATGGCAGAGCCACAC...TGTAGAGCCAGAGACAGCATCACACTCTTTCCCCTCCTGCATTCCAGGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCGGTACTCGTTACAAGTaGGGCGAGGACTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCGTRYK*GEDSWL
Trigger: CAGCCATGAGTCCTCGCCTCACTTGTAACGAGTACC...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp CCTCTGCCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTGACAAGTTAAGGTCCGTTGTTAGGATTCCATaGGGTCAGGTCTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLPSMSRGCGSAIDKLRSVVRIP*GQVFLC
Trigger: GCACAGGAAGACCTGACCTCATGGAATCCTAACAAC...GGACCTTAACTTGTCAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGCGCCAGGCAGGGGCTaGTGCTCTGCTGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGAPGRG*CSAALL
Trigger: CAGCAGAGCAGCAGAGCAGCAGCCCCTGCCTGGCGC...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACACAATGATGTTTTCATaGTCCTGGGTGGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDTMMFS*SWVVKF
Trigger: AAACTTGACCACCCAGGAGCATGAAAACATCATTGT...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGCTTGGCAGTGCTGGTaGGTTCCACCTCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTAWQCW*VPPPRG
Trigger: TCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACGGTGAACTTCTCATGTaGGAGAGCTTCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNGELLM*ESFFGE
Trigger: TTCCCCAAAGAAGCTCTCGCACATGAGAAGTTCACC...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGGAACCAGCCATCTTTaGCGGCCCGCACGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNGTSHL*RPARSA
Trigger: TGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTATGCCGGTCACACAGCTaGTCGTACATGCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLCRSHS*SYMRFP
Trigger: GGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCA...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGCAGCTGAGAGCTTGGTaGTGTTCATGTTTAAACTGC +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGQLRAW*CSCLNC
Trigger: GCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTG...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACTTGCAAACGTCTTCCTaGCTTGAGCTGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHLQTSS*LELGAS
Trigger: TGAAGCTCCCAGCTCAAGGCAGGAAGACGTTTGCAA...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGACCCCAGGACCGGCTaGTCTGCGGCTGTTAGTCAA +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTDPRTG*SAAVSQ
Trigger: TTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCAACAAGAATCACTTTaGATAGCAATGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDQQESL*IAMVRT
Trigger: TGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACATCTTTTTCTTCCATTaGAGAGAATGGAACCACTGG +
Preference number: 4 (lower is better)
Translates to: PPPERLPIYLTARAPGWDIFFFH*REWNHW
Trigger: CCAGTGGTTCCATTCTCTGCAATGGAAGAAAAAGAT...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp AATGGCATTTGCTGCTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACAGGTGCTGCTGACCCGTaGCACTCATTAAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: NGICCCPWNDEGTPRGHTGAADP*HSLSIR
Trigger: CCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACC...TGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCGAATTCACAGAGATCTaGTGGTGGGTGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: GGWLSTTCDWEWALASGCEFTEI*WWVVVF
Trigger: GAAAACAACCACCCACCACCAGATCTCTGTGAATTC...GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACGATTTCCTTCAGGCTTaGGGAATTGTCGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHDFLQA*GIVAAV
Trigger: AACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATC...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGGATTTCCTTCAGGCTTaGGGAATTGTCGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREDFLQA*GIVAAV
Trigger: AACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATC...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGGCGCAGAGGTAAAGTaGGCTTCCGGTCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNGAEVK*ASGRTA
Trigger: AGCCGTGCGACCGGAAGCCCACTTTACCTCTGCGCC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGGGCCTCAGACAGCGTaGCTTCCTGAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTGPQTA*LPETPG
Trigger: ACCTGGTGTCTCAGGAAGCCACGCTGTCTGAGGCCC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCCACGTGGATCTCACTaGAGGCCACGACCACCGACT +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALPRGSH*RPRPPT
Trigger: AGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTCGTTCCACCTCCACGTaGATCTCACTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTRSTST*ISLEAT
Trigger: CGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACG...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAAGCGTGCGGTCGGCCTaGGGGCCCAGCTCGATGCTC +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPSVRSA*GPSSML
Trigger: GAGCATCGAGCTGGGCCCCCAGGCCGACCGCACGCT...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCAGCTTCTTTGGGGAATaGAATGGGTTGAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTSFFGE*NGLKQT
Trigger: AGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCT...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTAGTGGACCTCTTGCCTaGGGTCTTCGGCGAACCTCT +
Preference number: 4 (lower is better)
Translates to: HLVRELETFGNQKRTVVGSGPLA*GLRRTS
Trigger: AGAGGTTCGCCGAAGACCCCAGGCAAGAGGTCCACT...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGACAGGATCTCCACCATaGTCTGGTTCCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVTGSPP*SGSPSV
Trigger: CACTGAGGGGGAACCAGACCATGGTGGAGATCCTGT...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAGTACTACACGCCAGGTaGGGGCGGGAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPVLHAR*GREGGG
Trigger: CCCACCGCCCTCCCGCCCCCACCTGGCGTGTAGTAC...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGTGCGAGGGGAAAGGTaGCATGTCTTGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTVRGER*HVLFLL
Trigger: AAGAAGAAACAAGACATGCCACCTTTCCCCTCGCAC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CCA 90 bp AATGGCATTTGCTGCTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACAGCCTCTCTGACATCATaGAAACGGAGGCCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: NGICCCPWNDEGTPRGHTASLTS*KRRPSE
Trigger: TTCCGAGGGCCTCCGTTTCCATGATGTCAGAGAGGC...TGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATATCTTTTTCTTTGCTTaGGCGCTGTGTCGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHIFFFA*ALCRSQ
Trigger: CTGGCTTCGACACAGCGCCCAAGCAAAGAAAAAGAT...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GGTGGCTGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCTCTACAGACATTATTTaGGCCTATTCTTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GGWLSTTCDWEWALASGCSTDII*AYSSRE
Trigger: CTCCCGGGAAGAATAGGCCCAAATAATGTCTGTAGA...GCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCAGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCTGCTCACCTTTCCTTCTAGCTaGCCAAAGCCAGAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: WLSTTCDWEWALASGCLLTFPSS*PKPERA
Trigger: AGCTCTTTCTGGCTTTGGCCAGCTAGAAGGAAAGGT...GAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCGCATCCCCAGACACCTaGGATCACTTAGGGGGTACT +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCASPDT*DHLGGT
Trigger: AGTACCCCCTAAGTGATCCCAGGTGTCTGGGGATGC...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp CAGCTCCACAACGGTGCTGCTGACCCGTGCCACTCATTAAGCATCAGGGCGCATCAAGTTTGTGTTCTCTaGGAGCAGTTTCGAGACGAT +
Preference number: 4 (lower is better)
Translates to: QLHNGAADPCHSLSIRAHQVCVL*EQFRDD
Trigger: ATCGTCTCGAAACTGCTCTCAGAGAACACAAACTTG...ATGCGCCCTGATGCTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCTTCCATCCCCGCGTTaGGCTCGTTCAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALLPSPR*ARSRQG
Trigger: TCCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGCGTGCATGCTCTGAATaGACTTCTTCACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCRERACSE*TSSPLP
Trigger: TGGAAGTGGTGAAGAAGTTCATTCAGAGCATGCACG...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCCACGACCACCGACTTaGGCCGGGCCTCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNPRPPT*AGPQTA
Trigger: CGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGACTTCAGTTCCTTGGTaGACTTCTCATGTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAETSVPW*TSHVRE
Trigger: CTCTCGCACATGAGAAGTTCACCAAGGAACTGAAGT...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTGGTGGCATCGGAGTTaGCTTTTCCCACACGACGGC +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALWWHRS*LFPHDG
Trigger: GCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGATAAAACAAGTACACTaGCTGTGGGGTAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGIKQVH*LWGRFG
Trigger: TCCAAACCTACCCCACAGTCAGTGTACTTGTTTTAT...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGACCTGGCACGGAAAATaGATTAAGACTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCRETWHGK*IKTGTQ
Trigger: CTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGT...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGACCTGGCACGGAAAATaGATTAAGACTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAETWHGK*IKTGTQ
Trigger: CTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGT...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCATGTCGCACCAGAGTGCTGTaGAGTATGGGACCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TVVLTIRKSNSARGKVACRTRVL*SMGPEG
Trigger: CCCCTCCGGTCCCATACTTCACAGCACTCTGGTGCG...ACATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR GCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGCCAGGCAGGGGCTGCTaGTCTGCTGCTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGPGRGC*SAALLL
Trigger: CAGCAGCAGAGCAGCAGAGCAGCAGCCCCTGCCTGG...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGCAGCAAAGGAGCGATTaGCACAATGATGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGQQRSD*HNDVFM
Trigger: CATGAAAACATCATTGTGGCAATCGCTCCTTTGCTG...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGCTTGGCAGTGCTGGTaGGTTCCACCTCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKAWQCW*VPPPRG
Trigger: TCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATGGGGGCCCAGCTCGATaGTCATGGTGCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNGGPAR*SWCCRR
Trigger: CCGCCTGCAGCACCATGAGCATCGAGCTGGGCCCCC...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTCGTAGCAGCCGAGCGTaGGGTCGGCCTGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFRSSRA*GRPGGP
Trigger: TGGGCCCCCAGGCCGACCGCACGCTCGGCTGCTACG...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGGTGAACTTCTCATGTaGGAGAGCTTCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFGELLM*ESFFGE
Trigger: TTCCCCAAAGAAGCTCTCGCACATGAGAAGTTCACC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTCATGAGTGGACCTCTTaGCTGGGGTCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTHEWTS*LGSSAN
Trigger: GTTCGCCGAAGACCCCAGGCAAGAGGTCCACTCATG...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGACCCAGCTTGTTTTCTaGCAGGGAGAGCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAETQLVF*QGEQEF
Trigger: AAATTCCTGCTCTCCCTGGCAGAAAACAAGCTGGGT...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGACAGCTGCTCGTACATaGGCTTCCCCACGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALTAART*ASPRLC
Trigger: GCACAGACGTGGGGAAGCGCATGTACGAGCAGCTGT...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAATGCCGGTCACACAGCTaGTCGTACATGCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKCRSHS*SYMRFP
Trigger: GGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCA...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTGCCGGTCACACAGCTaGTCGTACATGCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSCRSHS*SYMRFP
Trigger: GGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACTTATTTTGTCGCGGTTaGAAACGTCTTCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNLFCRG*KRLPAL
Trigger: CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAA...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCATTATTTTGTCGCGGTTaGAAACGTCTTCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TALLPGWTGEGGLAASHSLFCRG*KRLPAL
Trigger: CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAA...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGACCCCAGGACCGGCTaGTCTGCGGCTGTTAGTCAA +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSDPRTG*SAAVSQ
Trigger: TTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACTTCAAGTCTAAAAGGTaGCGAGAGAAAGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNFKSKR*REKELG
Trigger: CCCAAGCTCTTTCTCTCGGCACCTTTTAGACTTGAA...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTTGGGAGGCCGTGTCTaGTGCTCCCTCATTAGCTCG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALLGGRV*CSLISS
Trigger: CGAGCTAATGAGGGAGCAGCAGACACGGCCTCCCAA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR GCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCCCCATGCACCCGGCCTaGTTGAGAGACTTTCTAACT +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCPMHPA*LRDFLT
Trigger: AGTTAGAAAGTCTCTCAAGCAGGCCGGGTGCATGGG...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCAATAATGGCATTTGCTaGTGTCCCTGGAATGATGAG +
Preference number: 4 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLNNGIC*CPWNDE
Trigger: CTCATCATTCCAGGGACAGCAGCAAATGCCATTATT...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACAACTTCCCAGCGGCTTaGGTTACTCAGCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHNFPAA*VTQHFL
Trigger: AAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTT...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCATTTCATGCTCCTGGGTaGTCAAGTTTGTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TALLPGWTGEGGLAASHSFHAPG*SSLCSL
Trigger: CAGAGAACACAAACTTGACCACCCAGGAGCATGAAA...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGATGTTTTCATGCTCCTaGGTGGTCAAGTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGMFSCS*VVKFVF
Trigger: GAACACAAACTTGACCACCCAGGAGCATGAAAACAT...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACAGATCTGGTGGTGGGTaGTTGTTTTCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHRSGGG*LFSSKG
Trigger: TCCTTTGCTGGAAAACAACCACCCACCACCAGATCT...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGGGGGCAGTGCCCTGTaGGGCCGTGCATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGGGSAL*GRACSE
Trigger: TTCAGAGCATGCACGGCCCCACAGGGCACTGCCCCC...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAACGTTCCACCTCCACGTaGATCTCACTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKRSTST*ISLEAT
Trigger: CGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACG...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACACCGTCAGCGCCGGCTTaGCAGTGCTGGTGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTPSAPA*QCWCVP
Trigger: TGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGG...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGCCGTCAGCGCCGGCTTaGCAGTGCTGGTGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGPSAPA*QCWCVP
Trigger: TGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGG...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCATGTCGTTGCCTGCGCTaGCCGTCAGCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPCRCLR*PSAPAW
Trigger: CCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACA...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGTGCGAGAGCTTCTTTaGGGAATGGAATGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFVRELL*GMEWVE
Trigger: TTCAACCCATTCCATTCCCCAAAGAAGCTCTCGCAC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGGTGCGAGAGCTTCTTTaGGGAATGGAATGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREVRELL*GMEWVE
Trigger: TTCAACCCATTCCATTCCCCAAAGAAGCTCTCGCAC...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGGAGATGATCTGCAGTTaGGTGTCGTTGTTGTCGATG +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEEMICS*VSLLSM
Trigger: CATCGACAACAACGACACCCAACTGCAGATCATCTC...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTAGGGCAGTGTTAGCCTaGTGGGCCCGCCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTRAVLA*WARLSF
Trigger: AAAGGAAAGGCGGGCCCACCAGGCTAACACTGCCCT...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCTTCCTGCCTTGAGCTaGGAGCTTCACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALLPALS*ELHQAS
Trigger: CGAAGCCTGGTGAAGCTCCCAGCTCAAGGCAGGAAG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGAACCCGACAGCTGACTaGTTTATACAGTACTACACG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTNPTAD*FIQYYT
Trigger: CGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTT...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAATTTACCGGGGTGGACTaGAGAGGGCGGGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKFTGVD*RGRVSS
Trigger: GCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAA...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGGAGCTCCCTGGGGGTaGGGAACAGCTCTTTTACCG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSGAPWG*GTALLP
Trigger: CGGTAAAAGAGCTGTTCCCCACCCCCAGGGAGCTCC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACAAAAGAAACGGAGGTTaGTTTGTCTTCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNKRNGG*FVFGAG
Trigger: ACCTGCTCCGAAGACAAACCAACCTCCGTTTCTTTT...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCATCGGCCAGCGTTAGGTaGTGCGGCTCCCAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPSASVR*CGSQRL
Trigger: GAGGCGCTGGGAGCCGCACCACCTAACGCTGGCCGA...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCTCGCAGGTAGCTATTaGCAGCCTGGGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALLAGSY*QPGFPL
Trigger: CAAGGGGAACCCAGGCTGCCAATAGCTACCTGCGAG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR CCA 90 bp TGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCTGCTCAGATACTATAAATTCTaGGTCTGCCCAGAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: WLSTTCDWEWALASGCLLRYYKF*VCPERF
Trigger: GAACCGCTCTGGGCAGACCCAGAATTTATAGTATCT...GAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CAA 72 bp GTAAATGTCAAAGCTCTCTCTCGCCCACCGCCTGTGTaGTTAGGATTCCATGAGGTCAGGTCTTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VNVKALSRPPPV*LGFHEVRSSCA
Trigger: GGCACAGGAAGACCTGACCTCATGGAATCCTAACAACACAGGCGGTGGGCGAGAGAGAGCTTTGACATTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTCAAGTTTGTGTTCTCTaGGAGCAGTTTCGAGACGAT +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFQVCVL*EQFRDD
Trigger: ATCGTCTCGAAACTGCTCTCAGAGAACACAAACTTG...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCGAGCGATTGCCACAATaGTGTTTTCATGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCERLPQ*CFHAPG
Trigger: CCCAGGAGCATGAAAACATCATTGTGGCAATCGCTC...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCTTCCATCCCCGCGTTaGGCTCGTTCAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSLPSPR*ARSRQG
Trigger: TCCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGTCTTCGGCGAACCTCTaGATCACGTACTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVSSANL*ITYFSS
Trigger: GGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGA...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTGTAACAGGAGCCCATaGGGATGTGCACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALCNRSP*GCAPCW
Trigger: CCAGCATGGTGCACATCCTCATGGGCTCCTGTTACA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACTGTCGTTGTTGTCGATaGTGTTGTATTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNCRCCR*CCIPAS
Trigger: TGATGCTGGAATACAACATCATCGACAACAACGACA...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACACCCTCCCCGACCCGCTaGTGCTCCTCTTGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTPSPTR*CSSCCY
Trigger: GTAGCAACAAGAGGAGCATCAGCGGGTCGGGGAGGG...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAATGGTGGCATCGGAGTTaGCTTTTCCCACACGACGGC +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKWWHRS*LFPHDG
Trigger: GCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCA...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTACAGGACGGGTGCAGTaGTGTGACTGGGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTTGRVQ*CDWVFL
Trigger: CAAGAAGACCCAGTCACATCACTGCACCCGTCCTGT...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAACTGAGCCCCACCTCGTaGGGGAGTTGGAGACATTTG +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKLSPTS*GSWRHL
Trigger: CAAATGTCTCCAACTCCCTCACGAGGTGGGGCTCAG...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGGACCTCTTCGCAAGAAAACCTaGAGAACCTTTGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: STARLLLPPSIQCSLEGPLRKKT*RTFALN
Trigger: GTTCAGAGCAAAGGTTCTTCAGGTTTTCTTGCGAAG...AGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTAGGAGTGACTCAGAATaGACTGGAAGCACGTCGCGC +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTRSDSE*TGSTSR
Trigger: GCGCGACGTGCTTCCAGTGCATTCTGAGTCACTCCT...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGAGGCAAGCACATATaGCAGGGTTCTCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALRGKHI*QGSQAR
Trigger: CCTGGCCTGAGAACCCTGGCATATGTGCTTGCCTCT...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGGGCCGCTCTCTGCAGTaGTTGCAAAAGAATTCACAG +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVGRSLQ*LQKNSQ
Trigger: CTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCC...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTTCCGGTCGCACGGCTaGTGGCAGCCGTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGFRSHG*WQPFRI
Trigger: AATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAACATGAGTGGACCTCTTaGCTGGGGTCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKHEWTS*LGSSAN
Trigger: GTTCGCCGAAGACCCCAGGCAAGAGGTCCACTCATG...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGCAGTTTGATGAGGTaGTCGGCGCAGGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKGSLMR*SAQALV
Trigger: AACCAGTGCCTGCGCCGAGCACCTCATCAAACTGCC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACAGCAGAGAGGCGGGCATaGATGGGGCCACGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTAERRA*MGPREA
Trigger: TGCTTCACGTGGCCCCATGCATGCCCGCCTCTCTGC...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACCTTCCCGCACCAGAGTaGTGTGAAGTATGGGACCGG +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNLPAPE*CEVWDR
Trigger: CCGGTCCCATACTTCACAGCACTCTGGTGCGGGAAG...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTTTCATGCTCCTGGGTaGTCAAGTTTGTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFFHAPG*SSLCSL
Trigger: CAGAGAACACAAACTTGACCACCCAGGAGCATGAAA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGTTTCATGCTCCTGGGTaGTCAAGTTTGTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAEFHAPG*SSLCSL
Trigger: CAGAGAACACAAACTTGACCACCCAGGAGCATGAAA...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGGACCTTTTCATGCTCCTGGGTaGTCAAGTTTGTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: STARLLLPPSIQCSLEGPFHAPG*SSLCSL
Trigger: CAGAGAACACAAACTTGACCACCCAGGAGCATGAAA...AGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGGAATTCACAGAGATCTaGTGGTGGGTGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEEFTEI*WWVVVF
Trigger: GAAAACAACCACCCACCACCAGATCTCTGTGAATTC...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCATAGCAGGAGTAGATaGCAGCCAGGCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSHSRSR*QPGTRP
Trigger: TGGCCGTGTGCCTGGCTGCCATCTACTCCTGCTATG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCGGTCGCACGGCTGCTaGCAGCCGTTCCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNRSHGC*QPFRIS
Trigger: GGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATACACCAGGTCCGGGCTaGGGTGCAGAAGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNTPGPG*GAEGAE
Trigger: CTCTGCGCCTTCTGCACCCCAGCCCGGACCTGGTGT...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGCCGGCTTGGCAGTGCTaGTGCGTTCCACCTCCACGT +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGPAWQC*CVPPPR
Trigger: ACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGG...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGGATGTGCACCATGCTaGCGAACAGCTCCCCGTCAT +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKGCAPC*RTAPRH
Trigger: ATGACGGGGAGCTGTTCGCCAGCATGGTGCACATCC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACAGGGCAGTGTTAGCCTaGTGGGCCCGCCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNRAVLA*WARLSF
Trigger: AAAGGAAAGGCGGGCCCACCAGGCTAACACTGCCCT...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCAGGGCAGTGTTAGCCTaGTGGGCCCGCCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSRAVLA*WARLSF
Trigger: AAAGGAAAGGCGGGCCCACCAGGCTAACACTGCCCT...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCAGCGTCTGTGGACTTaGAGGGCAGTGTTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSQRLWT*RAVLAW
Trigger: CCAGGCTAACACTGCCCTCCAAGTCCACAGACGCTG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACCAGCGTCTGTGGACTTaGAGGGCAGTGTTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNQRLWT*RAVLAW
Trigger: CCAGGCTAACACTGCCCTCCAAGTCCACAGACGCTG...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAACTTCCTGCCTTGAGCTaGGAGCTTCACCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKLPALS*ELHQAS
Trigger: CGAAGCCTGGTGAAGCTCCCAGCTCAAGGCAGGAAG...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTAACCCGACAGCTGACTaGTTTATACAGTACTACACG +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFNPTAD*FIQYYT
Trigger: CGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCATGTAGAAACGCACAGTGGTaGGTGGGGGAGTGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TVVLTIRKSNSARGKVACRNAQW*VGEWAD
Trigger: GTCTGCCCACTCCCCCACCCACCACTGTGCGTTTCT...ACATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGCTCTTTTACCGGGGTaGACTGGAGAGGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNALLPG*TGEGGL
Trigger: TAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGCTCTTTTACCGGGGTaGACTGGAGAGGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSALLPG*TGEGGL
Trigger: TAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCAATCCTGGGCGCTGGGGTCTaGGTGTTGGGGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PNLGGAQKSATIHLQFAILGAGV*VLGQGD
Trigger: GTCACCCTGCCCCAACACCCAGACCCCAGCGCCCAG...GATTGCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp TGGTGGCCTGGAATGCAGGAGGGGAAAGAGTGTGATGCTGTCTCTGGCTCTACATGTTCTGGGATCCCATaGAGAGCCCCAAATGACATT +
Preference number: 4 (lower is better)
Translates to: WWPGMQEGKECDAVSGSTCSGIP*RAPNDI
Trigger: AATGTCATTTGGGGCTCTCCATGGGATCCCAGAACA...TGTAGAGCCAGAGACAGCATCACACTCTTTCCCCTCCTGCATTCCAGGCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGCAAGGATGTACTCCTaGGTAAACAGCCTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALARMYS*VNSLSR
Trigger: GCGACTGAGGCTGTTTACTCAGGAGTACATCCTTGC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGGGCCGTGCATGCTCTaGATGAACTTCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALGPCML*MNFFTT
Trigger: AGTGGTGAAGAAGTTCATTCAGAGCATGCACGGCCC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAACGGGTGCAGTGATGTaGCTGGGTCTTCTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKTGAVM*LGLLVP
Trigger: TGGGACAAGAAGACCCAGTCACATCACTGCACCCGT...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAACAGGACGGGTGCAGTaGTGTGACTGGGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKTGRVQ*CDWVFL
Trigger: CAAGAAGACCCAGTCACATCACTGCACCCGTCCTGT...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGGGCTGTTCTGTACAGTaGGGGCTTATTAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QSDWRRRHISLFPRDHAEGCSVQ*GLIKKK
Trigger: CTTTTTCTTAATAAGCCCTCACTGTACAGAACAGCC...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCGACTCCTCTGAGCTGTaGCAGTTTCTTAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: GAVGDILFFRGMVWRQASDSSEL*QFLRIS
Trigger: GGAGATTCTAAGAAACTGTCACAGCTCAGAGGAGTC...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCACATCACAAGTGAAATaGTGTGTGGTTACCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLTSQVK*CVVTLF
Trigger: AAAAAGGGTAACCACACATCATTTCACTTGTGATGT...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCGAAAGAGCTCCTCCTTaGAACTATGAGCGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GAVGDILFFRGMVWRQASERAPP*NYERPN
Trigger: ATTTGGGCGCTCATAGTTTCAAGGAGGAGCTCTTTC...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp AATGGCATTTGCTGCTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACATCAGGGCGCATTCAGTaGGTAAATGTCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: NGICCCPWNDEGTPRGHTSGRIQ*VNVKAL
Trigger: GAGAGCTTTGACATTTACTCACTGAATGCGCCCTGA...TGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGAAAGCAGAGCCTGTTaGTCCTCCACGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKESRAC*SSTGDK
Trigger: CTTGTCTCCCGTGGAGGAGCAACAGGCTCTGCTTTC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp TCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGGACCTCAGCAAAGGAGCGATTaGCACAATGATGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: STARLLLPPSIQCSLEGPQQRSD*HNDVFM
Trigger: CATGAAAACATCATTGTGGCAATCGCTCCTTTGCTG...AGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTCGTAGCAGCCGAGCGTaGGGTCGGCCTGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIRSSRA*GRPGGP
Trigger: TGGGCCCCCAGGCCGACCGCACGCTCGGCTGCTACG...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGAGGGTTGAGATGATCTaGAGTTGGGTGTCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVRVEMI*SWVSLL
Trigger: CAACAACGACACCCAACTGCAGATCATCTCAACCCT...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCCGGTCACACAGCTaGTCGTACATGCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGCRSHS*SYMRFP
Trigger: GGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGTCCTTCAGCTCCCGCTaGCGGTCACACAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRSFSSR*RSHSCS
Trigger: CGAGCAGCTGTGTGACCGGCAGCGGGAGCTGAAGGA...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGACCACAGGTTCAGCTaGTTGAGCGAAGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALDHRFS*LSEGSL
Trigger: CAAACTGCCTTCGCTCAAGCAGCTGAACCTGTGGTC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACTGTTCATGTTTAAACTaGAGAGACTCTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: PARNGGIGVDFSHTTASNCSCLN*RDSSWS
Trigger: GCTCCATGAAGAGTCTCTGCAGTTTAAACATGAACA...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGATCTTTTTCTTCCATTaGAGAGAATGGAACCACTGG +
Preference number: 4 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTIFFFH*REWNHW
Trigger: CCAGTGGTTCCATTCTCTGCAATGGAAGAAAAAGAT...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAGCAGAGAGGCGGGCATaGATGGGGCCACGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPAERRA*MGPREA
Trigger: TGCTTCACGTGGCCCCATGCATGCCCGCCTCTCTGC...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTACAGGAAAAGCAACAGTaGGAGGGGAAAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLQEKQQ*EGKGGM
Trigger: CATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTG...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGAACTTCCCAGCGGCTTaGGTTACTCAGCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVNFPAA*VTQHFL
Trigger: AAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTT...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCAACTTCCCAGCGGCTTaGGTTACTCAGCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCNFPAA*VTQHFL
Trigger: AAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTT...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACATGTTTTCATGCTCCTaGGTGGTCAAGTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: ESILRPARNGGIGVDFSHMFSCS*VVKFVF
Trigger: GAACACAAACTTGACCACCCAGGAGCATGAAAACAT...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGATGTTTTCATGCTCCTaGGTGGTCAAGTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREMFSCS*VVKFVF
Trigger: GAACACAAACTTGACCACCCAGGAGCATGAAAACAT...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTTGTCGTTGCCTGCGCTaGCCGTCAGCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFCRCLR*PSAPAW
Trigger: CCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACA...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTGGGTTGAAGCAAACTaGCCAGAGACGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALWVEAN*PETVSS
Trigger: ACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAACACAGGTTCAGCACCTaGAGCATGGTGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKHRFST*SMVRCS
Trigger: GGAACACCTCACCATGCTCCAGGTGCTGAACCTGTG...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACCCGAGAGAAAGAGCTTaGGCCTTAGTGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNPRERA*ALVEQG
Trigger: CCCTTGCTCCACTAAGGCCCAAGCTCTTTCTCTCGG...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATTTACCGGGGTGGACTaGAGAGGGCGGGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTFTGVD*RGRVSS
Trigger: GCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATAGAGGCGGGCATGCATaGGGCCACGTGAAGCACACG +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNRGGHA*GHVKHT
Trigger: CGTGTGCTTCACGTGGCCCCATGCATGCCCGCCTCT...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TGGCTCAGTACAACATGTGATTGGGAATGGGCCCTGGCCTCAGGCTGCCTGCTCTGTTTTTCTCATGATTaGAATGGGGTGATGGGTTAC +
Preference number: 4 (lower is better)
Translates to: WLSTTCDWEWALASGCLLCFSHD*NGVMGY
Trigger: GTAACCCATCACCCCATTCCAATCATGAGAAAAACA...GAGCAGGCAGCCTGAGGCCAGGGCCCATTCCCAATCACATGTTGTACTGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp ATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCCTATGCACAGGTGTCATGGGGAGAAAATTAATACATaGTCAACACTCCAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: IPSHLSGSQIPPMHRCHGEKINT*STLQAH
Trigger: ATGGGCCTGGAGTGTTGACCATGTATTAATTTTCTC...CCCATGACACCTGTGCATAGGAGGAATCTGGGACCCAGAGAGGTGGGACGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp CCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCAATCCCAGTGGGGCCTGGTTaGTGGAGTCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PNLGGAQKSATIHLQFAIPVGPG*WSHPAG
Trigger: CCCTGCAGGATGACTCCATCAACCAGGCCCCACTGG...GATTGCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGAGCGATTGCCACAATaGTGTTTTCATGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTERLPQ*CFHAPG
Trigger: CCCAGGAGCATGAAAACATCATTGTGGCAATCGCTC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACACTTCCATCCCCGCGTTaGGCTCGTTCAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTLPSPR*ARSRQG
Trigger: TCCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAG...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAAGTCTGACAGCAGCTTaGGGATTTCCACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKSLTAA*GFPRSS
Trigger: GCTGCTACGTGGAAATCCTCAAGCTGCTGTCAGACT...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGGAATGGAATGGGTTaGAGCAAACTGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKGNGMG*SKLARD
Trigger: GTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACGGGAATGGAATGGGTTaGAGCAAACTGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNGNGMG*SKLARD
Trigger: GTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCC...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTCTCCAGGGTTGAGATaGTCTGCAGTTGGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSSPGLR*SAVGCR
Trigger: ACGACACCCAACTGCAGATCATCTCAACCCTGGAGA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTTTCGTAGGTGTCAGCTaGGAGCTTGGTGCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTFVGVS*ELGAVH
Trigger: ATGAACAGCACCAAGCTCTCAGCTGACACCTACGAA...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATCGTCAGCAGGAATGTaGCCCTTGCCAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTSSAGM*PLPGEE
Trigger: CTCCTCTCCTGGCAAGGGGCACATTCCTGCTGACGA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGACAATGATGTTTTCATaGTCCTGGGTGGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: WTGEGGLAASHSSLKGAETMMFS*SWVVKF
Trigger: AAACTTGACCACCCAGGAGCATGAAAACATCATTGT...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp TCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGGACCTACAATGATGTTTTCATaGTCCTGGGTGGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: STARLLLPPSIQCSLEGPTMMFS*SWVVKF
Trigger: AAACTTGACCACCCAGGAGCATGAAAACATCATTGT...AGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACACATGAGTGGACCTCTTaGCTGGGGTCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTHEWTS*LGSSAN
Trigger: GTTCGCCGAAGACCCCAGGCAAGAGGTCCACTCATG...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTGTTCATGTTTAAACTaGAGAGACTCTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFCSCLN*RDSSWS
Trigger: GCTCCATGAAGAGTCTCTGCAGTTTAAACATGAACA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATGACCCCAGGACCGGCTaGTCTGCGGCTGTTAGTCAA +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNDPRTG*SAAVSQ
Trigger: TTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTC...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGTTCTCAAACGGTTATaGCATGCACGCCCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKVLKRL*HARPAH
Trigger: ATGGGCTGGGCGTGCATGGCATAACCGTTTGAGAAC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS-3UTR GCA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGATCTTTTTCTTCCATTaGAGAGAATGGAACCACTGG +
Preference number: 4 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREIFFFH*REWNHW
Trigger: CCAGTGGTTCCATTCTCTGCAATGGAAGAAAAAGAT...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAATTTCCCAAGAGACCATaGAGAGAGGCGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKFPKRP*REAGMH
Trigger: ATGCATGCCCGCCTCTCTGCATGGTCTCTTGGGAAA...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAATTTCCCAAGAGACCATaGAGAGAGGCGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKFPKRP*REAGMH
Trigger: ATGCATGCCCGCCTCTCTGCATGGTCTCTTGGGAAA...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCAAGGAGTGTCTTCGTTaGAGTGGTCACATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSKECLR*SGHMWG
Trigger: CCCCCACATGTGACCACTGCAACGAAGACACTCCTT...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTCGCCGCCGCCCGAGCTaGTGGTCACATCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIRRRPS*WSHPWP
Trigger: CGGCCATGGATGTGACCAGCAGCTCGGGCGGCGGCG...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR GCA 90 bp TCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGGACCTCTCTTCTCCTCCAGCTaGGGTATTTTTGTAATTCTT +
Preference number: 4 (lower is better)
Translates to: STARLLLPPSIQCSLEGPLFSSS*GIFVIL
Trigger: AAGAATTACAAAAATACCGCAGCTGGAGGAGAAGAG...AGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCATTTCCAGTGGGGCCTaGTTGATGGAGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSISSGA*LMESSC
Trigger: GCAGGATGACTCCATCAACCAGGCCCCACTGGAAAT...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACACATAGCAGGAGTAGATaGCAGCCAGGCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTHSRSR*QPGTRP
Trigger: TGGCCGTGTGCCTGGCTGCCATCTACTCCTGCTATG...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGGCCTCAGACAGCGTaGCTTCCTGAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRGPQTA*LPETPG
Trigger: ACCTGGTGTCTCAGGAAGCCACGCTGTCTGAGGCCC...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTGGGTTGAAGCAAACTaGCCAGAGACGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSWVEAN*PETVSS
Trigger: ACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGGATGTGCACCATGCTaGCGAACAGCTCCCCGTCAT +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGGCAPC*RTAPRH
Trigger: ATGACGGGGAGCTGTTCGCCAGCATGGTGCACATCC...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGAGATGATCTGCAGTTaGGTGTCGTTGTTGTCGATG +
Preference number: 4 (lower is better)
Translates to: HLVRELETFGNQKRTVVGEMICS*VSLLSM
Trigger: CATCGACAACAACGACACCCAACTGCAGATCATCTC...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGCAGTGTTAGCCTGGTaGGCCCGCCTTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGAVLAW*ARLSFA
Trigger: TGCAAAGGAAAGGCGGGCCCACCAGGCTAACACTGC...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAACCAAGTCAGCGTCTGTaGACTTGGAGGGCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKPSQRL*TWRAVL
Trigger: TAACACTGCCCTCCAAGTCCACAGACGCTGACTTGG...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATGCAGAGACTCTTCATaGAGCTCAGGGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTCRDSS*SSGPAG
Trigger: GCCTGCTGGCCCTGAGCTCCATGAAGAGTCTCTGCA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTTCCATTGCAGAGAATaGAACCACTGGTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALFHCRE*NHWSRR
Trigger: CCTGCGAGACCAGTGGTTCCATTCTCTGCAATGGAA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATAGAAACGCACAGTGGTaGGTGGGGGAGTGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNRNAQW*VGEWAD
Trigger: GTCTGCCCACTCCCCCACCCACCACTGTGCGTTTCT...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAGGAGCTCCCTGGGGGTaGGGAACAGCTCTTTTACCG +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPGAPWG*GTALLP
Trigger: CGGTAAAAGAGCTGTTCCCCACCCCCAGGGAGCTCC...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGAGCGATTGCCACAATaGTGTTTTCATGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSERLPQ*CFHAPG
Trigger: CCCAGGAGCATGAAAACATCATTGTGGCAATCGCTC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGAGCGATTGCCACAATaGTGTTTTCATGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKERLPQ*CFHAPG
Trigger: CCCAGGAGCATGAAAACATCATTGTGGCAATCGCTC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTTCGTAGGTGTCAGCTaGGAGCTTGGTGCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSFVGVS*ELGAVH
Trigger: ATGAACAGCACCAAGCTCTCAGCTGACACCTACGAA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGTGGTGGCATCGGAGTTaGCTTTTCCCACACGACGGC +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRWWHRS*LFPHDG
Trigger: GCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCA...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCCCACAACGGTGCTGCTaGCCCGTGCCACTCATTAAG +
Preference number: 4 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCPQRCC*PVPLIK
Trigger: CTTAATGAGTGGCACGGGTCAGCAGCACCGTTGTGG...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGCAGCAAAGGAGCGATTaGCACAATGATGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVQQRSD*HNDVFM
Trigger: CATGAAAACATCATTGTGGCAATCGCTCCTTTGCTG...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGCCGCTCTCTGCAGTaGTTGCAAAAGAATTCACAG +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKGRSLQ*LQKNSQ
Trigger: CTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGGCCGCTCTCTGCAGTaGTTGCAAAAGAATTCACAG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSGRSLQ*LQKNSQ
Trigger: CTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTTTCCGGTCGCACGGCTaGTGGCAGCCGTTCCGGATT +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFFRSHG*WQPFRI
Trigger: AATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAA...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTACCCAGCTTGTTTTCTaGCAGGGAGAGCAGGAATTT +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTTQLVF*QGEQEF
Trigger: AAATTCCTGCTCTCCCTGGCAGAAAACAAGCTGGGT...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTAGGGTTGAGATGATCTaGAGTTGGGTGTCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTRVEMI*SWVSLL
Trigger: CAACAACGACACCCAACTGCAGATCATCTCAACCCT...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGCAGTTTGATGAGGTaGTCGGCGCAGGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRGSLMR*SAQALV
Trigger: AACCAGTGCCTGCGCCGAGCACCTCATCAAACTGCC...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAATTGCAAACGTCTTCCTaGCTTGAGCTGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKLQTSS*LELGAS
Trigger: TGAAGCTCCCAGCTCAAGGCAGGAAGACGTTTGCAA...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTTGCAAACGTCTTCCTaGCTTGAGCTGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSLQTSS*LELGAS
Trigger: TGAAGCTCCCAGCTCAAGGCAGGAAGACGTTTGCAA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCTTCCCGCACCAGAGTaGTGTGAAGTATGGGACCGG +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNLPAPE*CEVWDR
Trigger: CCGGTCCCATACTTCACAGCACTCTGGTGCGGGAAG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AATGGCATTTGCTGCTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACAGTAAATCTTTTTCTTTaGTTGGGCGCTGTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: NGICCCPWNDEGTPRGHTVNLFL*LGAVSK
Trigger: CTTCGACACAGCGCCCAAGCAAAGAAAAAGATTTAC...TGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCTTGATTAATGATGTCTaGCATGAGCATGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GAVGDILFFRGMVWRQASLINDV*HEHGRG
Trigger: ACCCCTTCCATGCTCATGGCAGACATCATTAATCAA...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCATGTTTTCATGCTCCTaGGTGGTCAAGTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCMFSCS*VVKFVF
Trigger: GAACACAAACTTGACCACCCAGGAGCATGAAAACAT...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGCATAGCAGGAGTAGATaGCAGCCAGGCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRHSRSR*QPGTRP
Trigger: TGGCCGTGTGCCTGGCTGCCATCTACTCCTGCTATG...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GTGACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCAGATTTCCTTCAGGCTTaGGGAATTGTCGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VTVVLTIRKSNSARGKVADFLQA*GIVAAV
Trigger: AACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATC...TGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCACTCAGCAGGCATGAGTaGACCTCTTGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPLSRHE*TSCLGS
Trigger: AGACCCCAGGCAAGAGGTCCACTCATGCCTGCTGAG...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACAACAGGATCTCCACCATaGTCTGGTTCCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTTGSPP*SGSPSV
Trigger: CACTGAGGGGGAACCAGACCATGGTGGAGATCCTGT...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGAGATGATCTGCAGTTaGGTGTCGTTGTTGTCGATG +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALEMICS*VSLLSM
Trigger: CATCGACAACAACGACACCCAACTGCAGATCATCTC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCATGCAGAGACTCTTCATaGAGCTCAGGGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPCRDSS*SSGPAG
Trigger: GCCTGCTGGCCCTGAGCTCCATGAAGAGTCTCTGCA...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR CAA 72 bp TTCTGTCTAACTGGCTTGTTGTTGTCGATGTTGACCTaGATCACCTGGCTGAGGCTGAGTGTGTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: FCLTGLLLSMLT*ITWLRLSVSGF
Trigger: GAAACCAGACACACTCAGCCTCAGCCAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGTTAGACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGCAAGGATGTACTCCTaGGTAAACAGCCTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGARMYS*VNSLSR
Trigger: GCGACTGAGGCTGTTTACTCAGGAGTACATCCTTGC...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAACGTGCATGCTCTGAATaGACTTCTTCACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKRACSE*TSSPLP
Trigger: TGGAAGTGGTGAAGAAGTTCATTCAGAGCATGCACG...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCACTTCAGTTCCTTGGTaGACTTCTCATGTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSTSVPW*TSHVRE
Trigger: CTCTCGCACATGAGAAGTTCACCAAGGAACTGAAGT...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTCTCCAGGGTTGAGATaGTCTGCAGTTGGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGSPGLR*SAVGCR
Trigger: ACGACACCCAACTGCAGATCATCTCAACCCTGGAGA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCGGAGGGGAAAGAGTGTaGTGCTGTCTCTGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCGGERV*CCLWLY
Trigger: GTAGAGCCAGAGACAGCATCACACTCTTTCCCCTCC...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCAGGGTTGAGATGATCTaGAGTTGGGTGTCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSRVEMI*SWVSLL
Trigger: CAACAACGACACCCAACTGCAGATCATCTCAACCCT...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCAGCTGAGAGCTTGGTaGTGTTCATGTTTAAACTGC +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALQLRAW*CSCLNC
Trigger: GCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp ACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCATGTTTGCAAACGTCTTCCTaGCTTGAGCTGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TVVLTIRKSNSARGKVACLQTSS*LELGAS
Trigger: TGAAGCTCCCAGCTCAAGGCAGGAAGACGTTTGCAA...ACATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR GCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGAGGACACAGGACGGGTaGAGTGATGTGACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRRTQDG*SDVTGS
Trigger: AGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGATCTTTTTCTTCCATTaGAGAGAATGGAACCACTGG +
Preference number: 4 (lower is better)
Translates to: RELETFGNQKRTVVGGGVIFFFH*REWNHW
Trigger: CCAGTGGTTCCATTCTCTGCAATGGAAGAAAAAGAT...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGCGAGACGATTTCCAGTaGGGCCTGGTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRRDDFQ*GLVDGV
Trigger: GACTCCATCAACCAGGCCCCACTGGAAATCGTCTCG...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTATTTCATGCTCCTGGGTaGTCAAGTTTGTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLFHAPG*SSLCSL
Trigger: CAGAGAACACAAACTTGACCACCCAGGAGCATGAAA...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCAGATCTGGTGGTGGGTaGTTGTTTTCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSRSGGG*LFSSKG
Trigger: TCCTTTGCTGGAAAACAACCACCCACCACCAGATCT...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGAATTCACAGAGATCTaGTGGTGGGTGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTEFTEI*WWVVVF
Trigger: GAAAACAACCACCCACCACCAGATCTCTGTGAATTC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTGGGGGCAGTGCCCTGTaGGGCCGTGCATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIGGSAL*GRACSE
Trigger: TTCAGAGCATGCACGGCCCCACAGGGCACTGCCCCC...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTACACCAGGTCCGGGCTaGGGTGCAGAAGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRITPGPG*GAEGAE
Trigger: CTCTGCGCCTTCTGCACCCCAGCCCGGACCTGGTGT...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTGGGCCTCAGACAGCGTaGCTTCCTGAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFGPQTA*LPETPG
Trigger: ACCTGGTGTCTCAGGAAGCCACGCTGTCTGAGGCCC...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGGGTTGAAGCAAACTaGCCAGAGACGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGWVEAN*PETVSS
Trigger: ACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATGGGTTGAAGCAAACTaGCCAGAGACGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTWVEAN*PETVSS
Trigger: ACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGAGATGATCTGCAGTTaGGTGTCGTTGTTGTCGATG +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKEMICS*VSLLSM
Trigger: CATCGACAACAACGACACCCAACTGCAGATCATCTC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTAACCCGACAGCTGACTaGTTTATACAGTACTACACG +
Preference number: 4 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTNPTAD*FIQYYT
Trigger: CGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTT...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CCTCTGCCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTGACAAGTTAAGGTCCAATATTCTGTCTAACTaGCTTGTTGTTGTCGATGTT +
Preference number: 4 (lower is better)
Translates to: PLPSMSRGCGSAIDKLRSNILSN*LVVVDV
Trigger: AACATCGACAACAACAAGCCAGTTAGACAGAATATT...GGACCTTAACTTGTCAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCAAGTTTGTGTTCTCTaGGAGCAGTTTCGAGACGAT +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSQVCVL*EQFRDD
Trigger: ATCGTCTCGAAACTGCTCTCAGAGAACACAAACTTG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR TCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAGCAAGGATGTACTCCTaGGTAAACAGCCTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPARMYS*VNSLSR
Trigger: GCGACTGAGGCTGTTTACTCAGGAGTACATCCTTGC...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATGCAAGGATGTACTCCTaGGTAAACAGCCTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNARMYS*VNSLSR
Trigger: GCGACTGAGGCTGTTTACTCAGGAGTACATCCTTGC...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATGGGCCGTGCATGCTCTaGATGAACTTCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNGPCML*MNFFTT
Trigger: AGTGGTGAAGAAGTTCATTCAGAGCATGCACGGCCC...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATAGTCTGACAGCAGCTTaGGGATTTCCACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNSLTAA*GFPRSS
Trigger: GCTGCTACGTGGAAATCCTCAAGCTGCTGTCAGACT...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAAGTCTGACAGCAGCTTaGGGATTTCCACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPSLTAA*GFPRSS
Trigger: GCTGCTACGTGGAAATCCTCAAGCTGCTGTCAGACT...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGGAATGGAATGGGTTaGAGCAAACTGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRGNGMG*SKLARD
Trigger: GTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCC...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCATGTGCTCTCCAGGGTTaGGATGATCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPCALQG*DDLQLG
Trigger: ACCCAACTGCAGATCATCTCAACCCTGGAGAGCACA...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATTCCCCCAGGAATCGTaGGCTGTAAACAGTACTTCG +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTFPQES*AVNSTS
Trigger: CGAAGTACTGTTTACAGCTCACGATTCCTGGGGGAA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AGTGAAATGATGTGTGGTTACCCTTTTTCAGTTGTTTTCACGTGCTCCAGGAGATTAGTTCCGCCTCTCTaGCATCATGGAAACGGAGGC +
Preference number: 4 (lower is better)
Translates to: SEMMCGYPFSVVFTCSRRLVPPL*HHGNGG
Trigger: GCCTCCGTTTCCATGATGTCAGAGAGGCGGAACTAA...TCTCCTGGAGCACGTGAAAACAACTGAAAAAGGGTAACCACACATCATTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCCTCAAAGAACCCTTATaGAACGGTTTATTGACTAAC +
Preference number: 4 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCLKEPL*NGLLTN
Trigger: GTTAGTCAATAAACCGTTTCATAAGGGTTCTTTGAG...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCATCAGTGCCAGGAGCATaGAGGGACCCAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPSVPGA*RDPACF
Trigger: AAAACAAGCTGGGTCCCTGCATGCTCCTGGCACTGA...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTGGCAGTTTGATGAGGTaGTCGGCGCAGGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFGSLMR*SAQALV
Trigger: AACCAGTGCCTGCGCCGAGCACCTCATCAAACTGCC...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAATTCAAGTCTAAAAGGTaGCGAGAGAAAGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKFKSKR*REKELG
Trigger: CCCAAGCTCTTTCTCTCGGCACCTTTTAGACTTGAA...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GTGACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCATTCAAGTCTAAAAGGTaGCGAGAGAAAGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VTVVLTIRKSNSARGKVAFKSKR*REKELG
Trigger: CCCAAGCTCTTTCTCTCGGCACCTTTTAGACTTGAA...TGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR GCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCACAGGAAAAGCAACAGTaGGAGGGGAAAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPQEKQQ*EGKGGM
Trigger: CATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTG...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCCAAGTCAGCGTCTGTaGACTTGGAGGGCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNPSQRL*TWRAVL
Trigger: TAACACTGCCCTCCAAGTCCACAGACGCTGACTTGG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCTCGCAGGTAGCTATTaGCAGCCTGCAGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNLAGSY*QPAVRQ
Trigger: CTGTCTTACTGCAGGCTGCCAATAGCTACCTGCGAG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTTCCATTGCAGAGAATaGAACCACTGGTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGFHCRE*NHWSRR
Trigger: CCTGCGAGACCAGTGGTTCCATTCTCTGCAATGGAA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTAGAGGCGGGCATGCATaGGGCCACGTGAAGCACACG +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIRGGHA*GHVKHT
Trigger: CGTGTGCTTCACGTGGCCCCATGCATGCCCGCCTCT...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAAAAAGAAACGGAGGTTaGTTTGTCTTCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKKRNGG*FVFGAG
Trigger: ACCTGCTCCGAAGACAAACCAACCTCCGTTTCTTTT...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR CAA 72 bp GGAATATTCTGTCTAACTGGCTTGTTGTTGTCGATGTaGACCTTGATCACCTGGCTGAGGCTGAGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GIFCLTGLLLSM*TLITWLRLSVS
Trigger: AGACACACTCAGCCTCAGCCAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGTTAGACAGAATATTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CAA 72 bp CGTCCTATGAAGGGAATATTCTGTCTAACTGGCTTGTaGTTGTCGATGTTGACCTTGATCACCTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPMKGIFCLTGL*LSMLTLITWLR
Trigger: CCTCAGCCAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGAGCGATTGCCACAATaGTGTTTTCATGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRERLPQ*CFHAPG
Trigger: CCCAGGAGCATGAAAACATCATTGTGGCAATCGCTC...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTCTTCGGCGAACCTCTaGATCACGTACTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNSSANL*ITYFSS
Trigger: GGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGA...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGGCTGTTCTGTACAGTaGGGGCTTATTAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKGCSVQ*GLIKKK
Trigger: CTTTTTCTTAATAAGCCCTCACTGTACAGAACAGCC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGCTGTTCTGTACAGTaGGGGCTTATTAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RPADAPLVATKSTLDQVKGCSVQ*GLIKKK
Trigger: CTTTTTCTTAATAAGCCCTCACTGTACAGAACAGCC...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCATAAAACAAGTACACTaGCTGTGGGGTAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSIKQVH*LWGRFG
Trigger: TCCAAACCTACCCCACAGTCAGTGTACTTGTTTTAT...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCAATCGAAGAACCTTTGCTCTaGACTCCAGCATGGCACAGC +
Preference number: 4 (lower is better)
Translates to: PNLGGAQKSATIHLQFAIEEPLL*TPAWHS
Trigger: GCTGTGCCATGCTGGAGTTCAGAGCAAAGGTTCTTC...GATTGCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTTTCTGGGCAACACTTaGCATCGCTCTGGCAACTGT +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNFLGNT*HRSGNC
Trigger: ACAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGAAA...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGACAATGATGTTTTCATaGTCCTGGGTGGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALTMMFS*SWVVKF
Trigger: AAACTTGACCACCCAGGAGCATGAAAACATCATTGT...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCAGCAAAGGAGCGATTaGCACAATGATGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSQQRSD*HNDVFM
Trigger: CATGAAAACATCATTGTGGCAATCGCTCCTTTGCTG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGGGTGAACTTCTCATGTaGGAGAGCTTCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGGELLM*ESFFGE
Trigger: TTCCCCAAAGAAGCTCTCGCACATGAGAAGTTCACC...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCAACAAGAATCACTTTaGATAGCAATGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: AAVSQELFCRGCKRLPALQQESL*IAMVRT
Trigger: TGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCAATCAGGGTCCCTACTCTCTaGCAGACTGCCACAGATACT +
Preference number: 4 (lower is better)
Translates to: PNLGGAQKSATIHLQFAIRVPTL*QTATDT
Trigger: AGTATCTGTGGCAGTCTGGCAGAGAGTAGGGACCCT...GATTGCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCATGTTTTCATGCTCCTaGGTGGTCAAGTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSMFSCS*VVKFVF
Trigger: GAACACAAACTTGACCACCCAGGAGCATGAAAACAT...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAAGCTTCTTTGGGGAATaGAATGGGTTGAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKSFFGE*NGLKQT
Trigger: AGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCT...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACAGCTTCTTTGGGGAATaGAATGGGTTGAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNSFFGE*NGLKQT
Trigger: AGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCT...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCATGTCCACTTCCTTCAAATTaGGAAGCTTGGCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TVVLTIRKSNSARGKVACPLPSN*EAWPSD
Trigger: ATCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGG...ACATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CCA 90 bp AGTGAAATGATGTGTGGTTACCCTTTTTCAGTTGTTTTCACGTGCTCCAGGAGAAGGTCTTCCTGTGCCTaGCATGGCCATAATCACTGT +
Preference number: 4 (lower is better)
Translates to: SEMMCGYPFSVVFTCSRRRSSCA*HGHNHC
Trigger: ACAGTGATTATGGCCATGCCAGGCACAGGAAGACCT...TCTCCTGGAGCACGTGAAAACAACTGAAAAAGGGTAACCACACATCATTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCGTGCATGCTCTGAATaGACTTCTTCACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNRACSE*TSSPLP
Trigger: TGGAAGTGGTGAAGAAGTTCATTCAGAGCATGCACG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCACGTGCATGCTCTGAATaGACTTCTTCACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPRACSE*TSSPLP
Trigger: TGGAAGTGGTGAAGAAGTTCATTCAGAGCATGCACG...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTTCTCCAGGGTTGAGATaGTCTGCAGTTGGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFSPGLR*SAVGCR
Trigger: ACGACACCCAACTGCAGATCATCTCAACCCTGGAGA...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTTGGTGGCATCGGAGTTaGCTTTTCCCACACGACGGC +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIWWHRS*LFPHDG
Trigger: GCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCA...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AGTGAAATGATGTGTGGTTACCCTTTTTCAGTTGTTTTCACGTGCTCCAGGAGAGCCTCAGTTTCCTCGTaGCATACAGGGCAAATAATG +
Preference number: 4 (lower is better)
Translates to: SEMMCGYPFSVVFTCSRRASVSS*HTGQIM
Trigger: CATTATTTGCCCTGTATGTCACGAGGAAACTGAGGC...TCTCCTGGAGCACGTGAAAACAACTGAAAAAGGGTAACCACACATCATTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp AGGTCTTCCTGTGCCTGGCATGGCCATAATCACTGTTTAATACAGTCTGTTCTTAAATGTTTATGTGCCTaGAGAGGCATTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RSSCAWHGHNHCLIQSVLKCLCA*RGIPLP
Trigger: TGGCAGAGGAATGCCTCTTCAGGCACATAAACATTT...AAGAACAGACTGTATTAAACAGTGATTATGGCCATGCCAGGCACAGGAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACACAATGATGTTTTCATaGTCCTGGGTGGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNTMMFS*SWVVKF
Trigger: AAACTTGACCACCCAGGAGCATGAAAACATCATTGT...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTGTTCATGTTTAAACTaGAGAGACTCTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: AVSQELFCRGCKRLPALSCSCLN*RDSSWS
Trigger: GCTCCATGAAGAGTCTCTGCAGTTTAAACATGAACA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR GCA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACTGTTCATGTTTAAACTaGAGAGACTCTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNCSCLN*RDSSWS
Trigger: GCTCCATGAAGAGTCTCTGCAGTTTAAACATGAACA...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTTATTTTGTCGCGGTTaGAAACGTCTTCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGLFCRG*KRLPAL
Trigger: CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAACAACAAGAATCACTTTaGATAGCAATGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKQQESL*IAMVRT
Trigger: TGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTG...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCCTCAAAGCTTCAGTTTaGTCATCCGTGAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCLKASV*SSVKGS
Trigger: GCTCCCTTTCACGGATGAGCAAACTGAAGCTTTGAG...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATAACTTCCCAGCGGCTTaGGTTACTCAGCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNNFPAA*VTQHFL
Trigger: AAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTT...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAAGATCTGGTGGTGGGTaGTTGTTTTCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPRSGGG*LFSSKG
Trigger: TCCTTTGCTGGAAAACAACCACCCACCACCAGATCT...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCGAGAGCTTCTTTaGGGAATGGAATGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRVRELL*GMEWVE
Trigger: TTCAACCCATTCCATTCCCCAAAGAAGCTCTCGCAC...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTTGCAGAGACTCTTCATaGAGCTCAGGGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRICRDSS*SSGPAG
Trigger: GCCTGCTGGCCCTGAGCTCCATGAAGAGTCTCTGCA...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAGTGCGAGGGGAAAGGTaGCATGTCTTGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPVRGER*HVLFLL
Trigger: AAGAAGAAACAAGACATGCCACCTTTCCCCTCGCAC...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CCA 90 bp TTTATACGTCCTATGAAGGGAATATTCTGTCTAACTGGCTTGTTGTTGTCGATGTTCAGGGGCATGGTGTaGAGACAGGCAAGCTACATC +
Preference number: 4 (lower is better)
Translates to: FIRPMKGIFCLTGLLLSMFRGMV*RQASYI
Trigger: GATGTAGCTTGCCTGTCTCCACACCATGCCCCTGAA...CATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGGACGTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
3UTR CAA 72 bp ATACGTCCTATGAAGGGAATATTCTGTCTAACTGGCTaGTTGTTGTCGATGTTGACCTTGATCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IRPMKGIFCLTG*LLSMLTLITWL
Trigger: CAGCCAGGTGATCAAGGTCAACATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGGACGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATGTCGTTGTTGTCGATaGTGTTGTATTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTCRCCR*CCIPAS
Trigger: TGATGCTGGAATACAACATCATCGACAACAACGACA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTACGGGTGCAGTGATGTaGCTGGGTCTTCTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRITGAVM*LGLLVP
Trigger: TGGGACAAGAAGACCCAGTCACATCACTGCACCCGT...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCAATCTCCTCCTTGAAACTATaGGCGCCCAAATTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PNLGGAQKSATIHLQFAISSLKL*APKLRQ
Trigger: CTGCCTTAATTTGGGCGCTCATAGTTTCAAGGAGGA...GATTGCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGCAGCAAAGGAGCGATTaGCACAATGATGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGQQRSD*HNDVFM
Trigger: CATGAAAACATCATTGTGGCAATCGCTCCTTTGCTG...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTGGCCGCTCTCTGCAGTaGTTGCAAAAGAATTCACAG +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFGRSLQ*LQKNSQ
Trigger: CTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCC...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AGGTCTTCCTGTGCCTGGCATGGCCATAATCACTGTTTAATACAGTCTGTTCTTAAAGATTCTTCCTGTTaGCGTAATGGAGGACAAGCT +
Preference number: 4 (lower is better)
Translates to: RSSCAWHGHNHCLIQSVLKDSSC*RNGGQA
Trigger: AGCTTGTCCTCCATTACGGCAACAGGAAGAATCTTT...AAGAACAGACTGTATTAAACAGTGATTATGGCCATGCCAGGCACAGGAAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp GGTATTTTTGTAATTCTTAGGAACTGCAAAAAGATTCTTCCTGTTGCCGTAATGAGTGGTGGCCTGGAATaGAGGAGGGGAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GIFVILRNCKKILPVAVMSGGLE*RRGKSV
Trigger: CACACTCTTTCCCCTCCTGCATTCCAGGCCACCACT...CATTACGGCAACAGGAAGAATCTTTTTGCAGTTCCTAAGAATTACAAAAATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATGAATTCACAGAGATCTaGTGGTGGGTGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNEFTEI*WWVVVF
Trigger: GAAAACAACCACCCACCACCAGATCTCTGTGAATTC...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCCACTTCCTTCAAATTaGGAAGCTTGGCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNPLPSN*EAWPSD
Trigger: ATCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp GGTATTTTTGTAATTCTTAGGAACTGCAAAAAGATTCTTCCTGTTGCCGTAATGGTCCCTTTTCTGTTCTaGGATCCCATGGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GIFVILRNCKKILPVAVMVPFLF*DPMESP
Trigger: GGGGCTCTCCATGGGATCCCAGAACAGAAAAGGGAC...CATTACGGCAACAGGAAGAATCTTTTTGCAGTTCCTAAGAATTACAAAAATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTGGGAATGGAATGGGTTaGAGCAAACTGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIGNGMG*SKLARD
Trigger: GTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCC...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTTGTGCTCTCCAGGGTTaGGATGATCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRICALQG*DDLQLG
Trigger: ACCCAACTGCAGATCATCTCAACCCTGGAGAGCACA...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCACAGCAAAGGAGCGATTaGCACAATGATGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPQQRSD*HNDVFM
Trigger: CATGAAAACATCATTGTGGCAATCGCTCCTTTGCTG...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTTTTCCCAAGAGACCATaGAGAGAGGCGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIFPKRP*REAGMH
Trigger: ATGCATGCCCGCCTCTCTGCATGGTCTCTTGGGAAA...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp AGGTCTTCCTGTGCCTGGCATGGCCATAATCACTGTTTAATACAGTCTGTTCTTTACTCTCTGCCAGACTaGCACAGATACTATAAATTC +
Preference number: 4 (lower is better)
Translates to: RSSCAWHGHNHCLIQSVLYSLPD*HRYYKF
Trigger: GAATTTATAGTATCTGTGGCAGTCTGGCAGAGAGTA...AAGAACAGACTGTATTAAACAGTGATTATGGCCATGCCAGGCACAGGAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTAGATCTGGTGGTGGGTaGTTGTTTTCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFRSGGG*LFSSKG
Trigger: TCCTTTGCTGGAAAACAACCACCCACCACCAGATCT...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTCGTCTCCAAACTGAGTaGACCACAGGTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIRLQTE*TTGSAA
Trigger: AGCAGCTGAACCTGTGGTCCACTCAGTTTGGAGACG...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTCAAGTTTGTGTTCTCTaGGAGCAGTTTCGAGACGAT +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFQVCVL*EQFRDD
Trigger: ATCGTCTCGAAACTGCTCTCAGAGAACACAAACTTG...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATACAATGATGTTTTCATaGTCCTGGGTGGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNTMMFS*SWVVKF
Trigger: AAACTTGACCACCCAGGAGCATGAAAACATCATTGT...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTTGTCGTTGTTGTCGATaGTGTTGTATTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFCRCCR*CCIPAS
Trigger: TGATGCTGGAATACAACATCATCGACAACAACGACA...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR TCA 90 bp AGTGAAATGATGTGTGGTTACCCTTTTTCAGTTGTTTTCACGTGCTCCAGGAGATTGTTGGGATTTGTCTaGTGTTTTTCTCATGATTGG +
Preference number: 4 (lower is better)
Translates to: SEMMCGYPFSVVFTCSRRLLGFV*CFSHDW
Trigger: CCAATCATGAGAAAAACATCAGACAAATCCCAACAA...TCTCCTGGAGCACGTGAAAACAACTGAAAAAGGGTAACCACACATCATTTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp TTTATACGTCCTATGAAGGGAATATTCTGTCTAACTGGCTTGTTGTTGTCGATGGTCATGGGAATGGCATaGGGGTTAATAACACAATAC +
Preference number: 4 (lower is better)
Translates to: FIRPMKGIFCLTGLLLSMVMGMA*GLITQY
Trigger: GTATTGTGTTATTAACCCTCATGCCATTCCCATGAC...CATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGGACGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR TCA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCGTAAAGAACATTCTTTaGGACTCTCAAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCVKNIL*DSQSFS
Trigger: ACTGAAGCTTTGAGAGTCTCAAAGAATGTTCTTTAC...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR GCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTAGGGTTGAGATGATCTaGAGTTGGGTGTCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIRVEMI*SWVSLL
Trigger: CAACAACGACACCCAACTGCAGATCATCTCAACCCT...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp CACGAAATAAAACCTGGCACGGAAAATGAATTAAGACTGGAACCCAGTTTCTTTCAACAAGAATCACTTTaGATAGCAATGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: HEIKPGTENELRLEPSFFQQESL*IAMVRT
Trigger: TGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTG...AAAGAAACTGGGTTCCAGTCTTAATTCATTTTCCGTGCCAGGTTTTATTTCGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR GCA 90 bp TTTATACGTCCTATGAAGGGAATATTCTGTCTAACTGGCTTGTTGTTGTCGATGGCAAAAATGTTTATGTaGCTGAAGAGGCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: FIRPMKGIFCLTGLLLSMAKMFM*LKRHSS
Trigger: AGAGGAATGCCTCTTCAGGCACATAAACATTTTTGC...CATCGACAACAACAAGCCAGTTAGACAGAATATTCCCTTCATAGGACGTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTCCACTTCCTTCAAATTaGGAAGCTTGGCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIPLPSN*EAWPSD
Trigger: ATCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGG...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CCA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTAGCTTCTTTGGGGAATaGAATGGGTTGAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRISFFGE*NGLKQT
Trigger: AGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCT...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
3UTR CAA 72 bp GTTAATAACACAATACACTCAAAGAGCACCACACTCTaGACTCCAAGAAAGTGTTCAATAAGCATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: VNNTIHSKSTTL*TPRKCSISICK
Trigger: TTTGCAGATGCTTATTGAACACTTTCTTGGAGTCAAGAGTGTGGTGCTCTTTGAGTGTATTGTGTTATTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS TCA 90 bp GTGCAGGCTGGCAGGGGCAGGCATGTTCCTAGATGCGCAGGGCCCTaGGAGGCCTGGGGTGGCCGGCGAGGAGTGGCGAGGGAGTGCATG +
Preference number: 5 (lower is better)
Translates to: VQAGRGRHVPRCAGP*EAWGGRRGVARECM
Trigger: CATGCACTCCCTCGCCACTCCTCGCCGGCCACCCCAGGCCTCTCAGGGCCCTGCGCATCTAGGAACATGCCTGCCCCTGCCAGCCTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS TCA 90 bp CCTGCTCCTGCCTCTGACTGCGCTGTCCACGGGATCAGGGGGCAGTaGGCAAGTGGGATGCTGGAGCAGCTAGAGGCTCCCCGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: PAPASDCAVHGIRGQ*ASGMLEQLEAPRPL
Trigger: GAGCGGGCGGGGAGCCTCTAGCTGCTCCAGCATCCCACTTGCTCACTGCCCCCTGATCCCGTGGACAGCGCAGTCAGAGGCAGGAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565029.5
ENST00000566513.5
CDS GCA 90 bp TGTCGTTGCCTGCGCTGGCCGTCAGCGCCGGCTTGGCAGTGCTGGTaGGTTCCACCTCCACGTGGATCTCACTGGAGGCCACGACCACCG +
Preference number: 5 (lower is better)
Translates to: CRCLRWPSAPAWQCW*VPPPRGSHWRPRPP
Trigger: CGGTGGTCGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp GCTCGCTGTCGTTGCCTGCGCTGGCCGTCAGCGCCGGCTTGGCAGTaGTGGTGCGTTCCACCTCCACGTGGATCTCACTGGAGGCCACGA +
Preference number: 5 (lower is better)
Translates to: ARCRCLRWPSAPAWQ*WCVPPPRGSHWRPR
Trigger: TCGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp CGCAGGCCACCCCTCCGGGGCTGTAGAGCTGGAACCAGCCATCTTTaGCGGCCCGCACGCTCAGCAGGCATGAGTGGACCTCTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: RRPPLRGCRAGTSHL*RPARSAGMSGPLAW
Trigger: CCAGGCAAGAGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCAGCTCTACAGCCCCGGAGGGGTGGCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000565680.1
ENST00000566513.5
ENST00000569146.1
ENST00000621537.4
CDS CCA 90 bp GCCGGGCCTCAGACAGCGTGGCTTCCTGAGACACCAGGTCCGGGCTaGGGTGCAGAAGGCGCAGAGGTAAAGTGGGCTTCCGGTCGCACG +
Preference number: 5 (lower is better)
Translates to: AGPQTAWLPETPGPG*GAEGAEVKWASGRT
Trigger: CGTGCGACCGGAAGCCCACTTTACCTCTGCGCCTTCTGCACCCCAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTCTGAGGCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 90 bp GCCGTCAGCGCCGGCTTGGCAGTGCTGGTGCGTTCCACCTCCACGTaGATCTCACTGGAGGCCACGACCACCGACTTGAGCCGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: AVSAGLAVLVRSTST*ISLEATTTDLSRAS
Trigger: TGAGGCCCGGCTCAAGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 90 bp CGCTGTCGTTGCCTGCGCTGGCCGTCAGCGCCGGCTTGGCAGTGCTaGTGCGTTCCACCTCCACGTGGATCTCACTGGAGGCCACGACCA +
Preference number: 5 (lower is better)
Translates to: RCRCLRWPSAPAWQC*CVPPPRGSHWRPRP
Trigger: TGGTCGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 90 bp GGTTGGGCTCGCTGTCGTTGCCTGCGCTGGCCGTCAGCGCCGGCTTaGCAGTGCTGGTGCGTTCCACCTCCACGTGGATCTCACTGGAGG +
Preference number: 5 (lower is better)
Translates to: GWARCRCLRWPSAPA*QCWCVPPPRGSHWR
Trigger: CCTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCACACGGCCACCAGGTaGGGCAGGACCCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTHTATR*GRTRGW
Trigger: CCACCCCCGGGTCCTGCCCAACCTGGTGGCCGTGTG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCGCCGTCAGCGCCGGCTaGGCAGTGCTGGTGCGTTCC +
Preference number: 5 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPAVSAG*AVLVRS
Trigger: GGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGC...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGCCGTCAGCGCCGGCTaGGCAGTGCTGGTGCGTTCC +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDAVSAG*AVLVRS
Trigger: GGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp GCTGACCATGAGGCAGTCGATGAGGTTGGGCTCGCTGTCGTTGCCTaGGCTGGCCGTCAGCGCCGGCTTGGCAGTGCTGGTGCGTTCCAC +
Preference number: 5 (lower is better)
Translates to: ADHEAVDEVGLAVVA*AGRQRRLGSAGAFH
Trigger: GTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAACCTCATCGACTGCCTCATGGTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp AGCCCCACCAGCCAGCGGCAAGCAGAGACAGCAGGCAGAGCCTCCTaGTTCCCGTCTGGCAGAGTCAGCCACTCCAGCGCTGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: SPTSQRQAETAGRAS*FPSGRVSHSSAVLT
Trigger: GGTGAGGACAGCGCTGGAGTGGCTGACTCTGCCAGACGGGAAGCAGGAGGCTCTGCCTGCTGTCTCTGCTTGCCGCTGGCTGGTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS GCA 90 bp CGCAGGCCACCCCTCCGGGGCTGTAGAGCTGGAACCAGCCATCTTTaGCGGCCCGCACGCTCAGCAGGCATGAGTGGACCTGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: RRPPLRGCRAGTSHL*RPARSAGMSGPARQ
Trigger: TTGTCTGGCAGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCAGCTCTACAGCCCCGGAGGGGTGGCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS-3UTR CAA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGCCACGACCACCGACTaGAGCCGGGCCTCAGACAGC +
Preference number: 5 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVATTTD*SRASDS
Trigger: GCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGGC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTGCCACGACCACCGACTaGAGCCGGGCCTCAGACAGC +
Preference number: 5 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSATTTD*SRASDS
Trigger: GCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGGC...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCGCCGTCAGCGCCGGCTaGGCAGTGCTGGTGCGTTCC +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTAVSAG*AVLVRS
Trigger: GGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGC...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 90 bp GCCACGACCACCGACTTGAGCCGGGCCTCAGACAGCGTGGCTTCCTaGGACACCAGGTCCGGGCTGGGGTGCAGAAGGCGCAGAGGTAAA +
Preference number: 5 (lower is better)
Translates to: ATTTDLSRASDSVAS*DTRSGLGCRRRRGK
Trigger: TTTACCTCTGCGCCTTCTGCACCCCAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp GCAGAGAGGAGAATCACCACCGGCGTCATTTCCGAGCAGCGACTGTaGCGGCCCGCCGGGCGCCGTGCATCTACTGTTGCATGCGATCGC +
Preference number: 5 (lower is better)
Translates to: AERRITTGVISEQRL*RPAGRRASTVACDR
Trigger: GCGATCGCATGCAACAGTAGATGCACGGCGCCCGGCGGGCCGGCACAGTCGCTGCTCGGAAATGACGCCGGTGGTGATTCTCCTCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTTGGGCTCGCTGTCGTaGCCTGCGCTGGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTLGSLS*PALAVS
Trigger: GCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCTGGAACCAGCCATCTTaGCCGGCCCGCACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPWNQPS*PARTLS
Trigger: GCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCA...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGTGGAACCAGCCATCTTaGCCGGCCCGCACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVWNQPS*PARTLS
Trigger: GCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCA...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 90 bp GTTCCACCTCCACGTGGATCTCACTGGAGGCCACGACCACCGACTTaGGCCGGGCCTCAGACAGCGTGGCTTCCTGAGACACCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: VPPPRGSHWRPRPPT*AGPQTAWLPETPGP
Trigger: CGGACCTGGTGTCTCAGGAAGCCACGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 90 bp GTACGTGCTTCACGCCCTGGTCCTGACGTCAAGGTTTCCATCGCCTaGGCCATGGGGCACAACTCAGGCTCCTCGGGTGGCTGGGGGACC +
Preference number: 5 (lower is better)
Translates to: VRASRPGPDVKVSIA*AMGHNSGSSGGWGT
Trigger: GGTCCCCCAGCCACCCGAGGAGCCTGAGTTGTGCCCCATGGCTCAGGCGATGGAAACCTTGACGTCAGGACCAGGGCGTGAAGCACGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS GCA 90 bp GTTGGCGTGGCGGACGCCAGGCTGTTGTCGGCCAGCGTTAGGTGGTaGGGCTCCCAGCGCCTCAGGAATTTCGAGGTGAGGATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VGVADARLLSASVRW*GSQRLRNFEVRILL
Trigger: CAGCAAGATCCTCACCTCGAAATTCCTGAGGCGCTGGGAGCCGCACCACCTAACGCTGGCCGACAACAGCCTGGCGTCCGCCACGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS CCA 90 bp AGCAGGCCAGCGTCTGTGACCGGGGTCTCGCACAGGTTCAGCACCTaGAGCATGGTGAGGTGTTCCGACAGGAGCCGAAGGCCAGCGTCT +
Preference number: 5 (lower is better)
Translates to: SRPASVTGVSHRFST*SMVRCSDRSRRPAS
Trigger: AGACGCTGGCCTTCGGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGCTGAACCTGTGCGAGACCCCGGTCACAGACGCTGGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000561605.1
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTCACACGGCCACCAGGTaGGGCAGGACCCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFHTATR*GRTRGW
Trigger: CCACCCCCGGGTCCTGCCCAACCTGGTGGCCGTGTG...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTGGAACCAGCCATCTTaGCCGGCCCGCACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTWNQPS*PARTLS
Trigger: GCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCGGGCCCGCCTTTCCTTaGCAGCTCCTTCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTGPAFP*QLLQLP
Trigger: CGGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGGCCC...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp TCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGGACCTCCCGGGCTCCCGCCTTaGCAGCTGCCTGCCCCATGC +
Preference number: 5 (lower is better)
Translates to: STARLLLPPSIQCSLEGPPGLPP*QLPAPC
Trigger: GCATGGGGCAGGCAGCTGCAAAGGCGGGAGCCCGGG...AGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp TCTACACGAGAGGCGGATCCTCCTCGGTCCTCCCAGCAGTTCTCCTCTGCCGCCTCGCGCTCTGGGTCCTaGAGGGCAGGGCATCTACAG +
Preference number: 5 (lower is better)
Translates to: STREADPPRSSQQFSSAASRSGS*RAGHLQ
Trigger: CTGTAGATGCCCTGCCCTCAAGGACCCAGAGCGCGA...GGCGGCAGAGGAGAACTGCTGGGAGGACCGAGGAGGATCCGCCTCTCGTGTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS GCA 90 bp CGTCAGCAGGAATGTGCCCCTTGCCAGGAGAGGAGTGACTCAGAATaGACTGGAAGCACGTCGCGCCAGGCAGGGGCTGCTGCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RQQECAPCQERSDSE*TGSTSRQAGAAALL
Trigger: CAGCAGAGCAGCAGCCCCTGCCTGGCGCGACGTGCTTCCAGTGCATTCTGAGTCACTCCTCTCCTGGCAAGGGGCACATTCCTGCTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398040.8
ENST00000564666.1
CDS GCA 90 bp CAGCCATCTTTGCCGGCCCGCACGCTCAGCAGGCATGAGTGGACCTaGCAGACAAGGGAAGACACAAGTGTGAGCTGCATGCAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: QPSLPARTLSRHEWT*QTREDTSVSCMQPR
Trigger: CCGGGGCTGCATGCAGCTCACACTTGTGTCTTCCCTTGTCTGGCAGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CCA 90 bp CTTCACGCCCTGGTCCTGACGTCAAGGTTTCCATCGCCTGAGCCATaGGGCACAACTCAGGCTCCTCGGGTGGCTGGGGGACCCCTCTTA +
Preference number: 5 (lower is better)
Translates to: LHALVLTSRFPSPEP*GTTQAPRVAGGPLL
Trigger: TAAGAGGGGTCCCCCAGCCACCCGAGGAGCCTGAGTTGTGCCCCATGGCTCAGGCGATGGAAACCTTGACGTCAGGACCAGGGCGTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS-3UTR CAA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAGCCACGACCACCGACTaGAGCCGGGCCTCAGACAGC +
Preference number: 5 (lower is better)
Translates to: TALLPGWTGEGGLAASHSATTTD*SRASDS
Trigger: GCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGGC...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACGCCGTCAGCGCCGGCTaGGCAGTGCTGGTGCGTTCC +
Preference number: 5 (lower is better)
Translates to: ESILRPARNGGIGVDFSHAVSAG*AVLVRS
Trigger: GGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGC...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACTTGGGCTCGCTGTCGTaGCCTGCGCTGGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: PARNGGIGVDFSHTTASNLGSLS*PALAVS
Trigger: GCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAA...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGCAGTCGATGAGGTaGGGCTCGCTGTCGTTGCCT +
Preference number: 5 (lower is better)
Translates to: PPERLPIYLTARAPGWDPRQSMR*GSLSLP
Trigger: AGGCAACGACAGCGAGCCCAACCTCATCGACTGCCT...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACAGGCAGTCGATGAGGTaGGGCTCGCTGTCGTTGCCT +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDRQSMR*GSLSLP
Trigger: AGGCAACGACAGCGAGCCCAACCTCATCGACTGCCT...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGGGGCCCGCCTTTCCTTaGCAGCTCCTTCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGGPAFP*QLLQLP
Trigger: CGGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGGCCC...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTCTGGATCTGAGGAGTaGCAAGCCGCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDSGSEE*QAASSS
Trigger: GGAGGAGGAGGCGGCTTGCAACTCCTCAGATCCAGA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR CAA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCGAAGCCAGAGAGCGGTaGGGACAGGGGCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLEARER*GQGLLP
Trigger: AGGCAGCAGCCCCTGTCCCAACCGCTCTCTGGCTTC...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS TCA 90 bp GGAGACAAGTCGTCAGCAGGAATGTGCCCCTTGCCAGGAGAGGAGTaGCTCAGAATGCACTGGAAGCACGTCGCGCCAGGCAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GDKSSAGMCPLPGEE*LRMHWKHVAPGRGC
Trigger: GCAGCCCCTGCCTGGCGCGACGTGCTTCCAGTGCATTCTGAGTCACTCCTCTCCTGGCAAGGGGCACATTCCTGCTGACGACTTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398040.8
ENST00000564666.1
CDS TCA 90 bp GGCTGCTGCCTCCCTGGATTTGAGGCAGAGTTAGTTCCGCCTCTCTaGCATCATGGAAACGGAGGCCCTCGGAAGGCGGAGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GCCLPGFEAELVPPL*HHGNGGPRKAEVWA
Trigger: GGCCCAGACCTCCGCCTTCCGAGGGCCTCCGTTTCCATGATGTCAGAGAGGCGGAACTAACTCTGCCTCAAATCCAGGGAGGCAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS GCA 90 bp GGGTGCAGAAGGCGCAGAGGTAAAGTGGGCTTCCGGTCGCACGGCTaGTGGCAGCCGTTCCGGATTTCCTTCAGGCTTGGGGAATTGTCG +
Preference number: 5 (lower is better)
Translates to: GCRRRRGKVGFRSHG*WQPFRISFRLGELS
Trigger: CGACAATTCCCCAAGCCTGAAGGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAAGCCCACTTTACCTCTGCGCCTTCTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp AGACCTGAATGTCGCCCTCCTGCAGCAGTTTGTACCTCATCCCGTTaGAAAGCAGAAGAGCCCGGCGGCAGGGCACGGCGCCCATCTTCG +
Preference number: 5 (lower is better)
Translates to: RPECRPPAAVCTSSR*KAEEPGGRARRPSS
Trigger: CGAAGATGGGCGCCGTGCCCTGCCGCCGGGCTCTTCTGCTTTGCAACGGGATGAGGTACAAACTGCTGCAGGAGGGCGACATTCAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS GCA 90 bp GGTGACTCACTGCCAGCAGGAGGATGTGGCAGAAGTGATGCCGCCTaGCTCCACCATGGTCTGGTTCCCCCTCAGTGCCAGGAGCATGCA +
Preference number: 5 (lower is better)
Translates to: GDSLPAGGCGRSDAA*LHHGLVPPQCQEHA
Trigger: TGCATGCTCCTGGCACTGAGGGGGAACCAGACCATGGTGGAGGCAGGCGGCATCACTTCTGCCACATCCTCCTGCTGGCAGTGAGTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565680.1
CDS CCA 90 bp TGCAGAAGGCGCAGAGGTAAAGTGGGCTTCCGGTCGCACGGCTGCTaGCAGCCGTTCCGGATTTCCTTCAGGCTTGGGGAATTGTCGCGG +
Preference number: 5 (lower is better)
Translates to: CRRRRGKVGFRSHGC*QPFRISFRLGELSR
Trigger: CCGCGACAATTCCCCAAGCCTGAAGGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAAGCCCACTTTACCTCTGCGCCTTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 90 bp TGGGAAGGGGAGGGGATGGTGTCAAGGAAGAACGGGCCAGGGAGCTaGGCAAGGCGGTGGATCAGGGACACGTGTCTCAAGAGAACTGCC +
Preference number: 5 (lower is better)
Translates to: WEGEGMVSRKNGPGS*ARRWIRDTCLKRTA
Trigger: GGCAGTTCTCTTGAGACACGTGTCCCTGATCCACCGCCTTGCCCAGCTCCCTGGCCCGTTCTTCCTTGACACCATCCCCTCCCCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569146.1
CDS CCA 90 bp GTGGAGTCGGCGAGGCTGCTGGCCACTAGGGTGCAGCATCTGCCCTaGGGGAGGAAGAGTCTGTGGCCCTTTACTCCTGGAAGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: VESARLLATRVQHLP*GRKSLWPFTPGRSH
Trigger: ATGGCTTCTTCCAGGAGTAAAGGGCCACAGACTCTTCCTCCCCCAGGGCAGATGCTGCACCCTAGTGGCCAGCAGCCTCGCCGACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS-3UTR CAA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGAAAGCAGAGCCTGTaGCTCCTCCACGGGAGACAA +
Preference number: 5 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVGKQSL*LLHGRQ
Trigger: TTGTCTCCCGTGGAGGAGCAACAGGCTCTGCTTTCC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR CAA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGACTTCCATCCCCGCGTaGAGCTCGTTCAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVTSIPA*SSFKAR
Trigger: CCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAGT...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTACTTCCATCCCCGCGTaGAGCTCGTTCAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSTSIPA*SSFKAR
Trigger: CCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAGT...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGTTGGGCTCGCTGTCGTaGCCTGCGCTGGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: WTGEGGLAASHSSLKGAELGSLS*PALAVS
Trigger: GCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAA...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGTGGAACCAGCCATCTTaGCCGGCCCGCACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTWNQPS*PARTLS
Trigger: GCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCA...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACATGCAGGGACCCAGCTaGTTTTCTGCCAGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDMQGPS*FSARES
Trigger: GCTCTCCCTGGCAGAAAACAAGCTGGGTCCCTGCAT...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGACAGCAAAGGCTGACAGGGACAGGAGCTCCCTGGGGGTGGGGAACAGCTCTATGCAGGGACCCAGCTaGTTTTCTGCCAGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GTAKADRDRSSLGVGNSSMQGPS*FSARES
Trigger: GCTCTCCCTGGCAGAAAACAAGCTGGGTCCCTGCAT...AGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCTGTCAGCCTTTGCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGGGCCCGCCTTTCCTTaGCAGCTCCTTCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTGPAFP*QLLQLP
Trigger: CGGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGGCCC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGTCAGCGTCTGTGGACTaGGAGGGCAGTGTTAGCCTG +
Preference number: 5 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVSASVD*EGSVSL
Trigger: CAGGCTAACACTGCCCTCCAAGTCCACAGACGCTGA...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTTGAGCGAAGGCAGTTaGATGAGGTGCTCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDLSEGS*MRCSAQ
Trigger: CTGCGCCGAGCACCTCATCAAACTGCCTTCGCTCAA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGCCGAGAGAAAGAGCTaGGGCCTTAGTGGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVAERKS*GLSGAR
Trigger: CCTTGCTCCACTAAGGCCCAAGCTCTTTCTCTCGGC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACGCCGAGAGAAAGAGCTaGGGCCTTAGTGGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDAERKS*GLSGAR
Trigger: CCTTGCTCCACTAAGGCCCAAGCTCTTTCTCTCGGC...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGGACTGTGGGGTAGGTTaGGAGGTGCCGGAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGDCGVG*EVPEEG
Trigger: TCCCTCCTCCGGCACCTCCAAACCTACCCCACAGTC...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGGCGGACGCCAGGCTGTaGTCGGCCAGCGTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREADARL*SASVRW
Trigger: CCACCTAACGCTGGCCGACAACAGCCTGGCGTCCGC...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTCCCTTGGGGGAAGGGTaGGGAGGCCGTGTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFPLGEG*GGRVCC
Trigger: GCAGCAGACACGGCCTCCCAACCCTTCCCCCAAGGG...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS TCA 90 bp CTCCTCCTCCTTTTCCTCTGCTTCCTCCTCTCCTGCTCCTGCCTCTaGCTGCGCTGTCCACGGGATCAGGGGGCAGTGAGCAAGTGGGAT +
Preference number: 5 (lower is better)
Translates to: LLLLFLCFLLSCSCL*LRCPRDQGAVSKWD
Trigger: ATCCCACTTGCTCACTGCCCCCTGATCCCGTGGACAGCGCAGTCAGAGGCAGGAGCAGGAGAGGAGGAAGCAGAGGAAAAGGAGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565029.5
ENST00000566513.5
CDS GCA 90 bp CCTTTCCTTTGCAGCTCCTTCAGCTCCCGCTGCCGGTCACACAGCTaGTCGTACATGCGCTTCCCCACGTCTGTGCTCTCCAGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: PFLCSSFSSRCRSHS*SYMRFPTSVLSRVE
Trigger: CTCAACCCTGGAGAGCACAGACGTGGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCAGCGGGAGCTGAAGGAGCTGCAAAGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp AGCAAGTGGAGTCGGCGAGGCTGCTGGCCACTAGGGTGCAGCATCTaGCCTGGGGGAGGAAGAGTCTGTGGCCCTTTACTCCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SKWSRRGCWPLGCSI*PGGGRVCGPLLLEE
Trigger: TTCTTCCAGGAGTAAAGGGCCACAGACTCTTCCTCCCCCAGGGCAGATGCTGCACCCTAGTGGCCAGCAGCCTCGCCGACTCCACTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS GCA 90 bp CCCGTCTGGCAGAGTCAGCCACTCCAGCGCTGTCCTCACCCTCTCTaGTTGTCAAGGAAGGGACGTTACCTGGGCAACACTTGCCATCGC +
Preference number: 5 (lower is better)
Translates to: PVWQSQPLQRCPHPL*LSRKGRYLGNTCHR
Trigger: GCGATGGCAAGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAGCAGAGAGGGTGAGGACAGCGCTGGAGTGGCTGACTCTGCCAGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CCA 90 bp GCCTGGGGTCTTCGGCGAACCTCTGAATCACGTACTTCAGTTCCCTaGAAGAGACGAGGCGGCCGGAGTTACTGCCGGGGTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: AWGLRRTSESRTSVP*KRRGGRSYCRGLEL
Trigger: CAGTTCCAGACCCCGGCAGTAACTCCGGCCGCCTCGTCTCTTCCAGGGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGACCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569146.1
CDS-3UTR CAA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGATTTCCTTCAGGCTaGGGGAATTGTCGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVGFPSG*GNCRGC
Trigger: ACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATCC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTCAGCGTCTGTGGACTaGGAGGGCAGTGTTAGCCTG +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTSASVD*EGSVSL
Trigger: CAGGCTAACACTGCCCTCCAAGTCCACAGACGCTGA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGGGCAGCCCGGCCGGCTaGGTTTGTTGTTCTCAAACG +
Preference number: 5 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGGSPAG*VCCSQT
Trigger: CGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCC...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTTCGAGGTGAGGATCTaGCTGAGAAAGGTCCGCGGG +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTFEVRI*LRKVRG
Trigger: CCCGCGGACCTTTCTCAGCAAGATCCTCACCTCGAA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS TCA 90 bp AGCAGGCATGAGTGGACCTCTTGCCTGGGGTCTTCGGCGAACCTCTaGATCACGTACTTCAGTTCCCTGGAAGAGACGAGGCGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: SRHEWTSCLGSSANL*ITYFSSLEETRRPE
Trigger: CTCCGGCCGCCTCGTCTCTTCCAGGGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGACCCCAGGCAAGAGGTCCACTCATGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569146.1
CDS TCA 90 bp GAGCTGGAACCAGCCATCTTTGCCGGCCCGCACGCTCAGCAGGCATaGGTGGACCTGCCAGACAAGGGAAGACACAAGTGTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: ELEPAIFAGPHAQQA*VDLPDKGRHKCELH
Trigger: ATGCAGCTCACACTTGTGTCTTCCCTTGTCTGGCAGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS GCA 90 bp GTTGCTCCTCCACGGGAGACAAGTCGTCAGCAGGAATGTGCCCCTTaGCAGGAGAGGAGTGACTCAGAATGCACTGGAAGCACGTCGCGC +
Preference number: 5 (lower is better)
Translates to: VAPPRETSRQQECAP*QERSDSECTGSTSR
Trigger: GCGCGACGTGCTTCCAGTGCATTCTGAGTCACTCCTCTCCTGGCAAGGGGCACATTCCTGCTGACGACTTGTCTCCCGTGGAGGAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398040.8
ENST00000564666.1
CDS GCA 90 bp AGTCGCGGGCACTTCCCAAAGTCCATGTTATGCTTGAGGATTCGCTaGACCACGGGGGTGAACACCTCGATGACCACCATGGACCGGGGC +
Preference number: 5 (lower is better)
Translates to: SRGHFPKSMLCLRIR*TTGVNTSMTTMDRG
Trigger: GCCCCGGTCCATGGTGGTCATCGAGGTGTTCACCCCCGTGGTGCAGCGAATCCTCAAGCATAACATGGACTTTGGGAAGTGCCCGCGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp GCTGCTCCCTCATTAGCTCGGAGTCCGGCTCTGGATCTGAGGAGTTaGAAGCCGCCTCCTCCTCCTCCTTTTCCTCTGCTTCCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: AAPSLARSPALDLRS*KPPPPPPFPLLPPL
Trigger: GAGAGGAGGAAGCAGAGGAAAAGGAGGAGGAGGAGGCGGCTTGCAACTCCTCAGATCCAGAGCCGGACTCCGAGCTAATGAGGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565029.5
ENST00000566513.5
CDS CCA 90 bp TGGAACCAGCCATCTTTGCCGGCCCGCACGCTCAGCAGGCATGAGTaGACCTGCCAGACAAGGGAAGACACAAGTGTGAGCTGCATGCAG +
Preference number: 5 (lower is better)
Translates to: WNQPSLPARTLSRHE*TCQTREDTSVSCMQ
Trigger: CTGCATGCAGCTCACACTTGTGTCTTCCCTTGTCTGGCAGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS-3UTR CAA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCAACTTCCCAGCGGCTaGGGTTACTCAGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: PPERLPIYLTARAPGWDPQLPSG*GYSALS
Trigger: AGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTG...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAACTTCCCAGCGGCTaGGGTTACTCAGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPQLPSG*GYSALS
Trigger: AGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGACTTCCATCCCCGCGTaGAGCTCGTTCAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGTSIPA*SSFKAR
Trigger: CCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAGT...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTACACACGGCCACCAGGTaGGGCAGGACCCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLHTATR*GRTRGW
Trigger: CCACCCCCGGGTCCTGCCCAACCTGGTGGCCGTGTG...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCTTCAGGCTTGGGGAATaGTCGCGGCTGTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPFRLGE*SRLLMN
Trigger: GTTCATCAACAGCCGCGACAATTCCCCAAGCCTGAA...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGTCAGCGTCTGTGGACTaGGAGGGCAGTGTTAGCCTG +
Preference number: 5 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGSASVD*EGSVSL
Trigger: CAGGCTAACACTGCCCTCCAAGTCCACAGACGCTGA...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCAGGCACTGGTTACATaGGTGAAGGCCAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDQALVT*VKAKLR
Trigger: CCTCAGTTTGGCCTTCACCAATGTAACCAGTGCCTG...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGCACTGGTTACATaGGTGAAGGCCAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPQALVT*VKAKLR
Trigger: CCTCAGTTTGGCCTTCACCAATGTAACCAGTGCCTG...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 90 bp GAAGCCAGAGAGCGGTTGGGACAGGGGCTGCTGCCTCCCTGGATTTaGGGCAGAGTTAGTTCCGCCTCTCTGACATCATGGAAACGGAGG +
Preference number: 5 (lower is better)
Translates to: EARERLGQGLLPPWI*GRVSSASLTSWKRR
Trigger: CCTCCGTTTCCATGATGTCAGAGAGGCGGAACTAACTCTGCCTCAAATCCAGGGAGGCAGCAGCCCCTGTCCCAACCGCTCTCTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS GCA 90 bp ATCAGGGACACGTGTCTCAAGAGAACTGCCAAGAGGAGCCACCACTaGCTCCCAGAATGCATGGGCCACGGAGGGAAGACCTCAGGACAG +
Preference number: 5 (lower is better)
Translates to: IRDTCLKRTAKRSHH*LPECMGHGGKTSGQ
Trigger: CTGTCCTGAGGTCTTCCCTCCGTGGCCCATGCATTCTGGGAGGCAGTGGTGGCTCCTCTTGGCAGTTCTCTTGAGACACGTGTCCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569146.1
CDS GCA 90 bp GGGAGGAAGAGTCTGTGGCCCTTTACTCCTGGAAGAAGCCATGTGTaGCTGGCCAAGGAAGGGCTTGGAAACAGAAGGCCTGTGGGACCC +
Preference number: 5 (lower is better)
Translates to: GRKSLWPFTPGRSHV*LAKEGLGNRRPVGP
Trigger: GGGTCCCACAGGCCTTCTGTTTCCAAGCCCTTCCTTGGCCAGGCACACATGGCTTCTTCCAGGAGTAAAGGGCCACAGACTCTTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS GCA 90 bp CGCCTGCCTCCACCATGGTCTGGTTCCCCCTCAGTGCCAGGAGCATaGAGGGACCCAGCTTGTTTTCTGCCAGGGAGAGCAGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: RLPPPWSGSPSVPGA*RDPACFLPGRAGIF
Trigger: AAAAATTCCTGCTCTCCCTGGCAGAAAACAAGCTGGGTCCCTGCATGCTCCTGGCACTGAGGGGGAACCAGACCATGGTGGAGGCAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565680.1
CDS CCA 90 bp GTAACTTCCCTCCTCGCAGGAAACAGAGCGGCAGCCCGGCCGGCTTaGTTTGTTGTTCTCAAACGGTTATGCCATGCACGCCCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: VTSLLAGNRAAARPA*FVVLKRLCHARPAH
Trigger: ATGGGCTGGGCGTGCATGGCATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCCGCTCTGTTTCCTGCGAGGAGGGAAGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS CCA 90 bp GGAAGAGTCTGTGGCCCTTTACTCCTGGAAGAAGCCATGTGTGCCTaGCCAAGGAAGGGCTTGGAAACAGAAGGCCTGTGGGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: GRVCGPLLLEEAMCA*PRKGLETEGLWDPR
Trigger: CCTGGGGTCCCACAGGCCTTCTGTTTCCAAGCCCTTCCTTGGCCAGGCACACATGGCTTCTTCCAGGAGTAAAGGGCCACAGACTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS-3UTR CAA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGTCCAGTGGGGCCTGGTaGATGGAGTCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WTGEGGLAASHSSLKGAESSGAW*MESSCR
Trigger: CCTGCAGGATGACTCCATCAACCAGGCCCCACTGGA...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTCCAGTGGGGCCTGGTaGATGGAGTCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSSGAW*MESSCR
Trigger: CCTGCAGGATGACTCCATCAACCAGGCCCCACTGGA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCCCTGGGTGGTCAAGTTaGTGTTCTCTGAGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: PPERLPIYLTARAPGWDPPGWSS*CSLRAV
Trigger: AACTGCTCTCAGAGAACACAAACTTGACCACCCAGG...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp TCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCCCACCCCTGGGTGGTCAAGTTaGTGTTCTCTGAGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: SHQDHPQLLIRPCLSRPTPGWSS*CSLRAV
Trigger: AACTGCTCTCAGAGAACACAAACTTGACCACCCAGG...GGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp CTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCTGGGTCCCAGATTCCTCTCTGGTGGTGGGTGGTaGTTTTCCAGCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: LLIRPCLSRPTSLGPRFLSGGGW*FSSKGA
Trigger: CGCTCCTTTGCTGGAAAACAACCACCCACCACCAGA...GAGGAATCTGGGACCCAGAGAGGTGGGACGGGATAGGCAGGGTCTGATGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGACTTCCATCCCCGCGTaGAGCTCGTTCAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTTSIPA*SSFKAR
Trigger: CCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAGT...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTTCAGGCTTGGGGAATaGTCGCGGCTGTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTFRLGE*SRLLMN
Trigger: GTTCATCAACAGCCGCGACAATTCCCCAAGCCTGAA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGGGATTTCCTTCAGGCTaGGGGAATTGTCGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGGFPSG*GNCRGC
Trigger: ACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATCC...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGCCGTCAGCGCCGGCTaGGCAGTGCTGGTGCGTTCC +
Preference number: 5 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTAVSAG*AVLVRS
Trigger: GGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTAGGCAGTCGATGAGGTaGGGCTCGCTGTCGTTGCCT +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFRQSMR*GSLSLP
Trigger: AGGCAACGACAGCGAGCCCAACCTCATCGACTGCCT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACATGCAGGGACCCAGCTaGTTTTCTGCCAGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: PARNGGIGVDFSHTTASNMQGPS*FSARES
Trigger: GCTCTCCCTGGCAGAAAACAAGCTGGGTCCCTGCAT...GTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCGCTGGGGTCTGGGTGTaGGGGCAGGGTGACTCACCA +
Preference number: 5 (lower is better)
Translates to: GAVGDILFFRGMVWRQASAGVWV*GQGDSP
Trigger: TGGTGAGTCACCCTGCCCCAACACCCAGACCCCAGC...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS GCA 90 bp AAGCACATATGCCAGGGTTCTCAGGCCAGGGAAAGCAGAGCCTGTTaGTCCTCCACGGGAGACAAGTCGTCAGCAGGAATGTGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: KHICQGSQARESRAC*SSTGDKSSAGMCPL
Trigger: CAAGGGGCACATTCCTGCTGACGACTTGTCTCCCGTGGAGGAGCAACAGGCTCTGCTTTCCCTGGCCTGAGAACCCTGGCATATGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398040.8
ENST00000564666.1
CDS GCA 90 bp GGCAAGTTACCAGCCCAAGGTCAACAAGCTAGCTCCCAGCAGAGCTaGGACTGGAAGCCCAGTTTGAGTGTGGGAGCACCAGTGACCAGT +
Preference number: 5 (lower is better)
Translates to: GKLPAQGQQASSQQS*DWKPSLSVGAPVTS
Trigger: ACTGGTCACTGGTGCTCCCACACTCAAACTGGGCTTCCAGTCGCAGCTCTGCTGGGAGCTAGCTTGTTGACCTTGGGCTGGTAACTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 90 bp GACTGGAAGCCCAGTTTGAGTGTGGGAGCACCAGTGACCAGTAAATaGAGCTGGTTTTCTCAGCAAGTGGAGTCGGCGAGGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: DWKPSLSVGAPVTSK*SWFSQQVESARLLA
Trigger: GGCCAGCAGCCTCGCCGACTCCACTTGCTGAGAAAACCAGCTCCATTTACTGGTCACTGGTGCTCCCACACTCAAACTGGGCTTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 90 bp AGCGCTGTCCTCACCCTCTCTGCTTGTCAAGGAAGGGACGTTACCTaGGCAACACTTGCCATCGCTCTGGCAACTGTCAGCAGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: SAVLTLSACQGRDVT*ATLAIALATVSRGK
Trigger: CTTGCCTCTGCTGACAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAGCAGAGAGGGTGAGGACAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CCA 90 bp CCTTTCTCCTGCCCCCTTTCTCCTTCTGCTATGCCTTCCTCTGGGTaGGGCCATCTCCTGGGTCTCCGTTCTCTGTTTGGTTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: PFSCPLSPSAMPSSG*GHLLGLRSLFGSLS
Trigger: GGACAGAGAACCAAACAGAGAACGGAGACCCAGGAGATGGCCCCACCCAGAGGAAGGCATAGCAGAAGGAGAAAGGGGGCAGGAGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCCCTGGGTGGTCAAGTTaGTGTTCTCTGAGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTPGWSS*CSLRAV
Trigger: AACTGCTCTCAGAGAACACAAACTTGACCACCCAGG...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAGGATTTCCTTCAGGCTaGGGGAATTGTCGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: TALLPGWTGEGGLAASHSGFPSG*GNCRGC
Trigger: ACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATCC...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACACGTACTTCAGTTCCTaGGTGAACTTCTCATGTGCG +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDTYFSS*VNFSCA
Trigger: CGCACATGAGAAGTTCACCAAGGAACTGAAGTACGT...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCACGTACTTCAGTTCCTaGGTGAACTTCTCATGTGCG +
Preference number: 5 (lower is better)
Translates to: APRKTPHLSHSQGTRVGPTYFSS*VNFSCA
Trigger: CGCACATGAGAAGTTCACCAAGGAACTGAAGTACGT...GGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGATGCAGGGACCCAGCTaGTTTTCTGCCAGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREMQGPS*FSARES
Trigger: GCTCTCCCTGGCAGAAAACAAGCTGGGTCCCTGCAT...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGTCAGCGTCTGTGGACTaGGAGGGCAGTGTTAGCCTG +
Preference number: 5 (lower is better)
Translates to: DWRGRVSSLPFKSKRCRESASVD*EGSVSL
Trigger: CAGGCTAACACTGCCCTCCAAGTCCACAGACGCTGA...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTCAGCGTCTGTGGACTaGGAGGGCAGTGTTAGCCTG +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSASVD*EGSVSL
Trigger: CAGGCTAACACTGCCCTCCAAGTCCACAGACGCTGA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTTGAGCGAAGGCAGTTaGATGAGGTGCTCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFLSEGS*MRCSAQ
Trigger: CTGCGCCGAGCACCTCATCAAACTGCCTTCGCTCAA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTCCACTTCCTTCAAATaGGGAAGCTTGGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDSTSFK*GSLAFR
Trigger: TCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGGA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCCTCCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGTTATTTTGTCGCGGTaGCAAACGTCTTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PSAPRKTPHLSHSQGTRVVILSR*QTSSCL
Trigger: AAGGCAGGAAGACGTTTGCAACCGCGACAAAATAAC...CACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCGCTGAACGTCTTCAATaGCGCTGTAGGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTAERLQ*RCRRLS
Trigger: ACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGC...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCGGGAGTTGGAGACATTaGGAAATCAGAAACGCACAG +
Preference number: 5 (lower is better)
Translates to: PPERLPIYLTARAPGWDPGSWRH*EIRNAQ
Trigger: CTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCC...GGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCTCTGCCAAGTATGTCCCGGGGGTGTGGCTCTGCCATTGACAAGTTAAGGTCCCGCCCACCGCCTGTGTaGTTAGGATTCCATGAGGTC +
Preference number: 5 (lower is better)
Translates to: PLPSMSRGCGSAIDKLRSRPPPV*LGFHEV
Trigger: GACCTCATGGAATCCTAACAACACAGGCGGTGGGCG...GGACCTTAACTTGTCAATGGCAGAGCCACACCCCCGGGACATACTTGGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp TCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCCCACCTCTCAAAGCTTCAGTTaGCTCATCCGTGAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: SHQDHPQLLIRPCLSRPTSQSFS*LIRERE
Trigger: CTCCCTTTCACGGATGAGCAAACTGAAGCTTTGAGA...GGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS TCA 90 bp AGGATCTTGCTGAGAAAGGTCCGCGGGTGCCGGATGACACAGACCTaGATGTCGCCCTCCTGCAGCAGTTTGTACCTCATCCCGTTGCAA +
Preference number: 5 (lower is better)
Translates to: RILLRKVRGCRMTQT*MSPSCSSLYLIPLQ
Trigger: TTGCAACGGGATGAGGTACAAACTGCTGCAGGAGGGCGACATTCAGGTCTGTGTCATCCGGCACCCGCGGACCTTTCTCAGCAAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS TCA 90 bp CTCCCAGGACAGCAGCTGAACGTCTTCAATTGCGCTGTAGGAGACTaGGTTTTCCATGTACCCAGTTGGCGTGGCGGACGCCAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LPGQQLNVFNCAVGD*VFHVPSWRGGRQAV
Trigger: AACAGCCTGGCGTCCGCCACGCCAACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGCTGCTGTCCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS CCA 90 bp AAGCCCAGTTTGAGTGTGGGAGCACCAGTGACCAGTAAATGGAGCTaGTTTTCTCAGCAAGTGGAGTCGGCGAGGCTGCTGGCCACTAGG +
Preference number: 5 (lower is better)
Translates to: KPSLSVGAPVTSKWS*FSQQVESARLLATR
Trigger: CCTAGTGGCCAGCAGCCTCGCCGACTCCACTTGCTGAGAAAACCAGCTCCATTTACTGGTCACTGGTGCTCCCACACTCAAACTGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTTCTGGTGGTGGGTGGTaGTTTTCCAGCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSGGGW*FSSKGA
Trigger: CGCTCCTTTGCTGGAAAACAACCACCCACCACCAGA...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGTCTGGTGGTGGGTGGTaGTTTTCCAGCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: DWRGRVSSLPFKSKRCRESGGGW*FSSKGA
Trigger: CGCTCCTTTGCTGGAAAACAACCACCCACCACCAGA...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACGGATTTCCTTCAGGCTaGGGGAATTGTCGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: ESILRPARNGGIGVDFSHGFPSG*GNCRGC
Trigger: ACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATCC...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGGGATTTCCTTCAGGCTaGGGGAATTGTCGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREGFPSG*GNCRGC
Trigger: ACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATCC...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGCCACGACCACCGACTaGAGCCGGGCCTCAGACAGC +
Preference number: 5 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKATTTD*SRASDS
Trigger: GCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGGC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTTGGGCTCGCTGTCGTaGCCTGCGCTGGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSLGSLS*PALAVS
Trigger: GCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CCGCCCCCAGAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACTGCAGTTGGGTGTCGTaGTTGTCGATGATGTTGTAT +
Preference number: 5 (lower is better)
Translates to: PPPERLPIYLTARAPGWDCSWVS*LSMMLY
Trigger: ATACAACATCATCGACAACAACGACACCCAACTGCA...GTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTCTGGGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTAGGGCCCGCCTTTCCTTaGCAGCTCCTTCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLGPAFP*QLLQLP
Trigger: CGGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGGCCC...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTATGGTGGCATCGGAGTaGACTTTTCCCACACGACGG +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFMVASE*TFPTRR
Trigger: CCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCAT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGACTGTGGGGTAGGTTaGGAGGTGCCGGAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: HLVRELETFGNQKRTVVGDCGVG*EVPEEG
Trigger: TCCCTCCTCCGGCACCTCCAAACCTACCCCACAGTC...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCCAGCCTGGGTTCCCCTaGGGGGAAGGGTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSQPGFP*GEGLGG
Trigger: GCCTCCCAACCCTTCCCCCAAGGGGAACCCAGGCTG...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566513.5
CDS-3UTR CAA 90 bp CTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGTGTGTAATTAGGAGGCGCAATCTTTTTCTTTGCTaGGGCGCTGTGTCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LPAVLLCRRRSWCVIRRRNLFLC*GAVSKP
Trigger: TGGCTTCGACACAGCGCCCAAGCAAAGAAAAAGATT...GCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp TCCCACCAGGACCACCCACAGCTGCTCATCAGACCCTGCCTATCCCGTCCCACCATCTACAGACATTATTaGGGCCTATTCTTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: SHQDHPQLLIRPCLSRPTIYRHY*GLFFPG
Trigger: TCCCGGGAAGAATAGGCCCAAATAATGTCTGTAGAT...GGTGGGACGGGATAGGCAGGGTCTGATGAGCAGCTGTGGGTGGTCCTGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp CTCCCAGCAGTTCTCCTCTGCCGCCGCCGCTCATGGTGTGTAATTAGGAGGCGCAGAATCTCCTTGTTTTaGATGACCTTGACCGTGGGG +
Preference number: 5 (lower is better)
Translates to: LPAVLLCRRRSWCVIRRRRISLF*MTLTVG
Trigger: CCCCACGGTCAAGGTCATCAAAAACAAGGAGATTCT...GCGCCTCCTAATTACACACCATGAGCGGCGGCGGCAGAGGAGAACTGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS TCA 90 bp TGTGTGTGTATGGGAGGAATTCCACATCCACTCTGGCCCCTGCTGTaGTTACACAGAGAGAGAGGGAAGGAGGGAGAGGATGGAGAGCGG +
Preference number: 5 (lower is better)
Translates to: CVCMGGIPHPLWPLL*LHRERGKEGEDGER
Trigger: CCGCTCTCCATCCTCTCCCTCCTTCCCTCTCTCTCTGTGTAATCACAGCAGGGGCCAGAGTGGATGTGGAATTCCTCCCATACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS GCA 90 bp ACAGGATCTCCACCATGGTCTGGTTCCCCCTCAGTGCCAGGAGCATaGAGGGACCCAGCTTGTTTTCTGCCAGGGAGAGCAGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: TGSPPWSGSPSVPGA*RDPACFLPGRAGIF
Trigger: AAAAATTCCTGCTCTCCCTGGCAGAAAACAAGCTGGGTCCCTGCATGCTCCTGGCACTGAGGGGGAACCAGACCATGGTGGAGATCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp ACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTaGAAACGTCTTCCTGCCTTGAGCTGGGAGCTTCACCAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: TGCSAAVSQELFCRG*KRLPALSWELHQAS
Trigger: CGAAGCCTGGTGAAGCTCCCAGCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 90 bp CACCCTCTCTGCTTGTCAAGGAAGGGACGTTACCTGGGCAACACTTaGCATCGCTCTGGCAACTGTCAGCAGAGGCAAGCACATATGCCA +
Preference number: 5 (lower is better)
Translates to: HPLCLSRKGRYLGNT*HRSGNCQQRQAHMP
Trigger: TGGCATATGTGCTTGCCTCTGCTGACAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAGCAGAGAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CCA 90 bp TTACCAGCCCAAGGTCAACAAGCTAGCTCCCAGCAGAGCTGCGACTaGAAGCCCAGTTTGAGTGTGGGAGCACCAGTGACCAGTAAATGG +
Preference number: 5 (lower is better)
Translates to: LPAQGQQASSQQSCD*KPSLSVGAPVTSKW
Trigger: CCATTTACTGGTCACTGGTGCTCCCACACTCAAACTGGGCTTCCAGTCGCAGCTCTGCTGGGAGCTAGCTTGTTGACCTTGGGCTGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 90 bp CTTGTCAAGGAAGGGACGTTACCTGGGCAACACTTGCCATCGCTCTaGCAACTGTCAGCAGAGGCAAGCACATATGCCAGGGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: LVKEGTLPGQHLPSL*QLSAEASTYARVLR
Trigger: CCTGAGAACCCTGGCATATGTGCTTGCCTCTGCTGACAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS-3UTR CAA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGTTCAGGCTTGGGGAATaGTCGCGGCTGTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: QSDWRRRHISLFPRDHAEFRLGE*SRLLMN
Trigger: GTTCATCAACAGCCGCGACAATTCCCCAAGCCTGAA...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTAGGCAGTCGATGAGGTaGGGCTCGCTGTCGTTGCCT +
Preference number: 5 (lower is better)
Translates to: HLVRELETFGNQKRTVVGRQSMR*GSLSLP
Trigger: AGGCAACGACAGCGAGCCCAACCTCATCGACTGCCT...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAAAGACTCCCCATCTATCTCACAGCCAGGGCACCAGGGTGGGACCCCAGGACCTGCAGTTGGGTGTCGTaGTTGTCGATGATGTTGTAT +
Preference number: 5 (lower is better)
Translates to: ERLPIYLTARAPGWDPRTCSWVS*LSMMLY
Trigger: ATACAACATCATCGACAACAACGACACCCAACTGCA...GGTCCTGGGGTCCCACCCTGGTGCCCTGGCTGTGAGATAGATGGGGAGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGGGCCCGCCTTTCCTTaGCAGCTCCTTCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKGPAFP*QLLQLP
Trigger: CGGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGGCCC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp TGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGCAGGCACTGGTTACATaGGTGAAGGCCAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: WTGEGGLAASHSSLKGAEQALVT*VKAKLR
Trigger: CCTCAGTTTGGCCTTCACCAATGTAACCAGTGCCTG...CTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGACACAGGACGGGTGCAGTGATGTGACTGGGTCTTCTTGTCCCAAGGGCGGGTCCACTTCCTTCAAATaGGGAAGCTTGGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RTQDGCSDVTGSSCPKGGSTSFK*GSLAFR
Trigger: TCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGGA...CCCGCCCTTGGGACAAGAAGACCCAGTCACATCACTGCACCCGTCCTGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGCCGCTGATGCTCCTCTaGTTGCTACAAAGTCCACTT +
Preference number: 5 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTPLMLL*LLQSPL
Trigger: AAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGG...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGCTGAACGTCTTCAATaGCGCTGTAGGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTAERLQ*RCRRLS
Trigger: ACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGGAAACGGAGGTTGGTTaGTCTTCGGAGCAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RELETFGNQKRTVVGGGVETEVG*SSEQVG
Trigger: CCCCACCTGCTCCGAAGACAAACCAACCTCCGTTTC...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS TCA 90 bp GGTAGCTATTGGCAGCCTGCAGTAAGACAGTTCCCCCAGGAATCGTaGGCTGTAAACAGTACTTCGGGGCATTCTCCCAGGACAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GSYWQPAVRQFPQES*AVNSTSGHSPRTAA
Trigger: AGCTGCTGTCCTGGGAGAATGCCCCGAAGTACTGTTTACAGCTCACGATTCCTGGGGGAACTGTCTTACTGCAGGCTGCCAATAGCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS TCA 90 bp TTCTCTTCCCCTTTGCAACCCAACGTGGAGACTCAGCTCAGCTTCTaGGACTTGGCCCCACAGCACAAAGCAAGAGGACCAGTAGCTGAC +
Preference number: 5 (lower is better)
Translates to: FSSPLQPNVETQLSF*DLAPQHKARGPVAD
Trigger: GTCAGCTACTGGTCCTCTTGCTTTGTGCTGTGGGGCCAAGTCTCAGAAGCTGAGCTGAGTCTCCACGTTGGGTTGCAAAGGGGAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS GCA 90 bp GTGAACACCTCGATGACCACCATGGACCGGGGCCGCTCTCTGCAGTaGTTGCAAAAGAATTCACAGAGATCTGGTGGTGGGTGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: VNTSMTTMDRGRSLQ*LQKNSQRSGGGWLF
Trigger: AAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCCCCGGTCCATGGTGGTCATCGAGGTGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CCA 90 bp AATCTTTTTCTTTGCTTGGGCGCTGTGTCGAAGCCAGAGAGCGGTTaGGACAGGGGCTGCTGCCTCCCTGGATTTGAGGCAGAGTTAGTT +
Preference number: 5 (lower is better)
Translates to: NLFLCLGAVSKPESG*DRGCCLPGFEAELV
Trigger: AACTAACTCTGCCTCAAATCCAGGGAGGCAGCAGCCCCTGTCCCAACCGCTCTCTGGCTTCGACACAGCGCCCAAGCAAAGAAAAAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp GAAAGCATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACCCTGGGTGGTCAAGTTaGTGTTCTCTGAGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: ESILRPARNGGIGVDFSHPGWSS*CSLRAV
Trigger: AACTGCTCTCAGAGAACACAAACTTGACCACCCAGG...GTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTTGGGCTCGCTGTCGTaGCCTGCGCTGGCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGLGSLS*PALAVS
Trigger: GCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTTTGAGCGAAGGCAGTTaGATGAGGTGCTCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: HLVRELETFGNQKRTVVGLSEGS*MRCSAQ
Trigger: CTGCGCCGAGCACCTCATCAAACTGCCTTCGCTCAA...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACAGCTCTTTTACCGGGGTGGACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCATCCACTTCCTTCAAATaGGGAAGCTTGGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: TALLPGWTGEGGLAASHSSTSFK*GSLAFR
Trigger: TCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGGA...TGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTCCACCCCGGTAAAAGAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ATCCTTCGTCCGGCCCGCAATGGTGGCATCGGAGTTGACTTTTCCCACACGACGGTTATTTTGTCGCGGTaGCAAACGTCTTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: ILRPARNGGIGVDFSHTTVILSR*QTSSCL
Trigger: AAGGCAGGAAGACGTTTGCAACCGCGACAAAATAAC...CGTCGTGTGGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGCCGAGAGAAAGAGCTaGGGCCTTAGTGGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: HLVRELETFGNQKRTVVGAERKS*GLSGAR
Trigger: CCTTGCTCCACTAAGGCCCAAGCTCTTTCTCTCGGC...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp AGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTGGGGGAGTGGAAGGAGTGTCTTCGTaGCAGTGGTCACATGTGGGG +
Preference number: 5 (lower is better)
Translates to: RELETFGNQKRTVVGGGVEGVSS*QWSHVG
Trigger: CCCCACATGTGACCACTGCAACGAAGACACTCCTTC...CACTCCCCCACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGACTGTGGGGTAGGTTaGGAGGTGCCGGAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSDCGVG*EVPEEG
Trigger: TCCCTCCTCCGGCACCTCCAAACCTACCCCACAGTC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp TCCACTGCAAGGCTACTCCTGCCCCCTTCCATACAGTGCTCTCTGGAAGGACCTTTGTTTTTGATGACCTaGACCGTGGGGAGTACTGGC +
Preference number: 5 (lower is better)
Translates to: STARLLLPPSIQCSLEGPLFLMT*TVGSTG
Trigger: GCCAGTACTCCCCACGGTCAAGGTCATCAAAAACAA...AGGTCCTTCCAGAGAGCACTGTATGGAAGGGGGCAGGAGTAGCCTTGCAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCCAGTGGGGAGTCTCCTaGTCCTGGAGAAAGAACTGC +
Preference number: 5 (lower is better)
Translates to: GAVGDILFFRGMVWRQASQWGVS*SWRKNC
Trigger: GCAGTTCTTTCTCCAGGACAAGGAGACTCCCCACTG...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS TCA 90 bp ACTTCCATCCCCGCGTTGAGCTCGTTCAAGGCAAGGATGTACTCCTaGGTAAACAGCCTCAGTCGCGGGCACTTCCCAAAGTCCATGTTA +
Preference number: 5 (lower is better)
Translates to: TSIPALSSFKARMYS*VNSLSRGHFPKSML
Trigger: TAACATGGACTTTGGGAAGTGCCCGCGACTGAGGCTGTTTACTCAGGAGTACATCCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 90 bp CAGCTGCTCGTACATGCGCTTCCCCACGTCTGTGCTCTCCAGGGTTaGGATGATCTGCAGTTGGGTGTCGTTGTTGTCGATGATGTTGTA +
Preference number: 5 (lower is better)
Translates to: QLLVHALPHVCALQG*DDLQLGVVVVDDVV
Trigger: TACAACATCATCGACAACAACGACACCCAACTGCAGATCATCTCAACCCTGGAGAGCACAGACGTGGGGAAGCGCATGTACGAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 90 bp CTTCCCAGAGCTGTGTGTCTGTGTGGATGGGCCTGTTTGTGCATGTaGGCACACGTGTGTGTGTGTATGGGAGGAATTCCACATCCACTC +
Preference number: 5 (lower is better)
Translates to: LPRAVCLCGWACLCM*AHVCVCMGGIPHPL
Trigger: GAGTGGATGTGGAATTCCTCCCATACACACACACACGTGTGCTCACATGCACAAACAGGCCCATCCACACAGACACACAGCTCTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS GCA 90 bp CCTTTTCAAGAAGCTCCCAGGGGCAGCGCCTCAATTTGTCATCGCTaGACAAACATCTCTGCTGAGTTCAGTGTGGACAGCCAAACCAGC +
Preference number: 5 (lower is better)
Translates to: PFQEAPRGSASICHR*TNISAEFSVDSQTS
Trigger: GCTGGTTTGGCTGTCCACACTGAACTCAGCAGAGATGTTTGTGCAGCGATGACAAATTGAGGCGCTGCCCCTGGGAGCTTCTTGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 90 bp CCTCAATTTGTCATCGCTGCACAAACATCTCTGCTGAGTTCAGTGTaGACAGCCAAACCAGCCACCCAGCAGAGAGGAGAATCACCACCG +
Preference number: 5 (lower is better)
Translates to: PQFVIAAQTSLLSSV*TAKPATQQRGESPP
Trigger: CGGTGGTGATTCTCCTCTCTGCTGGGTGGCTGGTTTGGCTGTCCACACTGAACTCAGCAGAGATGTTTGTGCAGCGATGACAAATTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS-3UTR CAA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAATCCAGTGGGGCCTGGTaGATGGAGTCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RPADAPLVATKSTLDQVKSSGAW*MESSCR
Trigger: CCTGCAGGATGACTCCATCAACCAGGCCCCACTGGA...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGACGTACTTCAGTTCCTaGGTGAACTTCTCATGTGCG +
Preference number: 5 (lower is better)
Translates to: DWRGRVSSLPFKSKRCRETYFSS*VNFSCA
Trigger: CGCACATGAGAAGTTCACCAAGGAACTGAAGTACGT...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGATGCAGGGACCCAGCTaGTTTTCTGCCAGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: AAVSQELFCRGCKRLPALMQGPS*FSARES
Trigger: GCTCTCCCTGGCAGAAAACAAGCTGGGTCCCTGCAT...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GACTGGAGAGGGCGGGTTAGCAGCCTCCCATTCAAGTCTAAAAGGTGCCGAGAGGGGAGTTGGAGACATTaGGAAATCAGAAACGCACAG +
Preference number: 5 (lower is better)
Translates to: DWRGRVSSLPFKSKRCREGSWRH*EIRNAQ
Trigger: CTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCC...CTCTCGGCACCTTTTAGACTTGAATGGGAGGCTGCTAACCCGCCCTCTCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCATGCACCCGGCCTGCTaGAGAGACTTTCTAACTGGA +
Preference number: 5 (lower is better)
Translates to: GAVGDILFFRGMVWRQASMHPAC*RDFLTG
Trigger: TCCAGTTAGAAAGTCTCTCAAGCAGGCCGGGTGCAT...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS CCA 90 bp CGCTTCCCCACGTCTGTGCTCTCCAGGGTTGAGATGATCTGCAGTTaGGTGTCGTTGTTGTCGATGATGTTGTATTCCAGCATCAAGCAC +
Preference number: 5 (lower is better)
Translates to: RFPTSVLSRVEMICS*VSLLSMMLYSSIKH
Trigger: GTGCTTGATGCTGGAATACAACATCATCGACAACAACGACACCCAACTGCAGATCATCTCAACCCTGGAGAGCACAGACGTGGGGAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTATCTGGTGGTGGGTGGTaGTTTTCCAGCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLSGGGW*FSSKGA
Trigger: CGCTCCTTTGCTGGAAAACAACCACCCACCACCAGA...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTAGTTGGGTGTCGTTGTaGTCGATGATGTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFSWVSL*SMMLYS
Trigger: GGAATACAACATCATCGACAACAACGACACCCAACT...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGTCGGACTGGCGGAGGCGACACATCTCTCTTTTCCCAAGAGACCATGCAGAGTGCAGTTGGGTGTCGTaGTTGTCGATGATGTTGTAT +
Preference number: 5 (lower is better)
Translates to: QSDWRRRHISLFPRDHAECSWVS*LSMMLY
Trigger: ATACAACATCATCGACAACAACGACACCCAACTGCA...CTCTGCATGGTCTCTTGGGAAAAGAGAGATGTGTCGCCTCCGCCAGTCCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CAGGGTGGGACCCCAGGACCGGCTGCTCTGCGGCTGTTAGTCAAGAGTTATTTTGTGTCAGCTGAGAGCTaGGTGCTGTTCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: QGGTPGPAALRLLVKSYFVSAES*VLFMFK
Trigger: TTTAAACATGAACAGCACCAAGCTCTCAGCTGACAC...AAAATAACTCTTGACTAACAGCCGCAGAGCAGCCGGTCCTGGGGTCCCACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTTTTCCATGTACCCAGTaGGCTCAGCAGCCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTFPCTQ*AQQPVP
Trigger: TGGGACAGGCTGCTGAGCCAACTGGGTACATGGAAA...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS-3UTR CAA 90 bp GAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTGCAGTGATGTGACTGAAGGAGTGTCTTCGTaGCAGTGGTCACATGTGGGG +
Preference number: 5 (lower is better)
Translates to: ESLCIAMVRTQDGCSDVTEGVSS*QWSHVG
Trigger: CCCCACATGTGACCACTGCAACGAAGACACTCCTTC...AGTCACATCACTGCACCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGAAACGGAGGTTGGTTaGTCTTCGGAGCAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSETEVG*SSEQVG
Trigger: CCCCACCTGCTCCGAAGACAAACCAACCTCCGTTTC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGCCCTCCTGCAGCAGTTaGTACCTCATCCCGTTGCAA +
Preference number: 5 (lower is better)
Translates to: AAVSQELFCRGCKRLPALPSCSS*YLIPLQ
Trigger: TTGCAACGGGATGAGGTACAAACTGCTGCAGGAGGG...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS TCA 90 bp GGGTTGAAGCAAACTGGCCAGAGACGGTCTCCAGTCATCATAGTCTaGCCTAGAATGAGAGAGGGTGACAGTCAGCTTTGGTTGGGACAA +
Preference number: 5 (lower is better)
Translates to: GLKQTGQRRSPVIIV*PRMREGDSQLWLGQ
Trigger: TTGTCCCAACCAAAGCTGACTGTCACCCTCTCTCATTCTAGGTCAGACTATGATGACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565680.1
CDS CCA 90 bp GGGCCGCTCTCTGCAGTGCTTGCAAAAGAATTCACAGAGATCTGGTaGTGGGTGGTTGTTTTCCAGCAAAGGAGCGATTGCCACAATGAT +
Preference number: 5 (lower is better)
Translates to: GPLSAVLAKEFTEIW*WVVVFQQRSDCHND
Trigger: ATCATTGTGGCAATCGCTCCTTTGCTGGAAAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CCA 90 bp CAAAAGCACAGCTCTCACATTCCTTCCCAGAGCTGTGTGTCTGTGTaGATGGGCCTGTTTGTGCATGTGAGCACACGTGTGTGTGTGTAT +
Preference number: 5 (lower is better)
Translates to: QKHSSHIPSQSCVSV*MGLFVHVSTRVCVY
Trigger: ATACACACACACACGTGTGCTCACATGCACAAACAGGCCCATCCACACAGACACACAGCTCTGGGAAGGAATGTGAGAGCTGTGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS-3UTR CAA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTCCAGTGGGGCCTGGTaGATGGAGTCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGSSGAW*MESSCR
Trigger: CCTGCAGGATGACTCCATCAACCAGGCCCCACTGGA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATCCAGTGGGGCCTGGTaGATGGAGTCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTSSGAW*MESSCR
Trigger: CCTGCAGGATGACTCCATCAACCAGGCCCCACTGGA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTCTGGTGGTGGGTGGTaGTTTTCCAGCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSSGGGW*FSSKGA
Trigger: CGCTCCTTTGCTGGAAAACAACCACCCACCACCAGA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACTCTGGTGGTGGGTGGTaGTTTTCCAGCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNSGGGW*FSSKGA
Trigger: CGCTCCTTTGCTGGAAAACAACCACCCACCACCAGA...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTCACACGGCCACCAGGTaGGGCAGGACCCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIHTATR*GRTRGW
Trigger: CCACCCCCGGGTCCTGCCCAACCTGGTGGCCGTGTG...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGTTCAGGCTTGGGGAATaGTCGCGGCTGTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: AAVSQELFCRGCKRLPALFRLGE*SRLLMN
Trigger: GTTCATCAACAGCCGCGACAATTCCCCAAGCCTGAA...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATGGTGGCATCGGAGTaGACTTTTCCCACACGACGG +
Preference number: 5 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKMVASE*TFPTRR
Trigger: CCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCAT...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACATGGTGGCATCGGAGTaGACTTTTCCCACACGACGG +
Preference number: 5 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNMVASE*TFPTRR
Trigger: CCGTCGTGTGGGAAAAGTCAACTCCGATGCCACCAT...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTACCCGGCCGGCTTGGTTaGTTGTTCTCAAACGGTTAT +
Preference number: 5 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLPGRLG*LFSNGY
Trigger: ATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGG...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS GCA 90 bp GAAGCTTGGCCTTCAGATCTTCGTAGGTGTCAGCTGAGAGCTTGGTaGTGTTCATGTTTAAACTGCAGAGACTCTTCATGGAGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: EAWPSDLRRCQLRAW*CSCLNCRDSSWSSG
Trigger: CCCTGAGCTCCATGAAGAGTCTCTGCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTGACACCTACGAAGATCTGAAGGCCAAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCTCCAGTGGGGCCTGGTaGATGGAGTCATCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCSSGAW*MESSCR
Trigger: CCTGCAGGATGACTCCATCAACCAGGCCCCACTGGA...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp CACCTCGTGAGGGAGTTGGAGACATTTGGAAATCAGAAACGCACAGTGGTGGGTACGTACTTCAGTTCCTaGGTGAACTTCTCATGTGCG +
Preference number: 5 (lower is better)
Translates to: HLVRELETFGNQKRTVVGTYFSS*VNFSCA
Trigger: CGCACATGAGAAGTTCACCAAGGAACTGAAGTACGT...ACCCACCACTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACCAGGCACTGGTTACATaGGTGAAGGCCAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNQALVT*VKAKLR
Trigger: CCTCAGTTTGGCCTTCACCAATGTAACCAGTGCCTG...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAACAGGCACTGGTTACATaGGTGAAGGCCAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: RPADAPLVATKSTLDQVKQALVT*VKAKLR
Trigger: CCTCAGTTTGGCCTTCACCAATGTAACCAGTGCCTG...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATTGAGCGAAGGCAGTTaGATGAGGTGCTCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTLSEGS*MRCSAQ
Trigger: CTGCGCCGAGCACCTCATCAAACTGCCTTCGCTCAA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTAGCTGAACGTCTTCAATaGCGCTGTAGGAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLAERLQ*RCRRLS
Trigger: ACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGC...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGGGCTGTAGGTGATATACTATTCTTCAGGGGCATGGTGTGGAGACAGGCAAGCGTTACCCTTTTTCAGTaGTTTTCACGTGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GAVGDILFFRGMVWRQASVTLFQ*FSRAPG
Trigger: TCCTGGAGCACGTGAAAACAACTGAAAAAGGGTAAC...GCTTGCCTGTCTCCACACCATGCCCCTGAAGAATAGTATATCACCTACAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS TCA 90 bp ATGCCTCTGGGTGACAGATTGGCTTTAAGCCATCGCACCACTGCCTaGGTCGCTTTAAACAAGCAACCGAGTCAGTACTTACCTTCCATT +
Preference number: 5 (lower is better)
Translates to: MPLGDRLALSHRTTA*VALNKQPSQYLPSI
Trigger: AATGGAAGGTAAGTACTGACTCGGTTGCTTGTTTAAAGCGACTCAGGCAGTGGTGCGATGGCTTAAAGCCAATCTGTCACCCAGAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS CCA 90 bp CCGCTCTCTGCAGTGCTTGCAAAAGAATTCACAGAGATCTGGTGGTaGGTGGTTGTTTTCCAGCAAAGGAGCGATTGCCACAATGATGTT +
Preference number: 5 (lower is better)
Translates to: PLSAVLAKEFTEIWW*VVVFQQRSDCHNDV
Trigger: AACATCATTGTGGCAATCGCTCCTTTGCTGGAAAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CCA 90 bp TGGGAAGCTTGGCCTTCAGATCTTCGTAGGTGTCAGCTGAGAGCTTaGTGCTGTTCATGTTTAAACTGCAGAGACTCTTCATGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: WEAWPSDLRRCQLRA*CCSCLNCRDSSWSS
Trigger: TGAGCTCCATGAAGAGTCTCTGCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTGACACCTACGAAGATCTGAAGGCCAAGCTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp ACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCATGTCAACTTCCCAGCGGCTaGGGTTACTCAGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: TVVLTIRKSNSARGKVACQLPSG*GYSALS
Trigger: AGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTG...ACATGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CAA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATACTTCCATCCCCGCGTaGAGCTCGTTCAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNTSIPA*SSFKAR
Trigger: CCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAGT...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGACGTACTTCAGTTCCTaGGTGAACTTCTCATGTGCG +
Preference number: 5 (lower is better)
Translates to: AAVSQELFCRGCKRLPALTYFSS*VNFSCA
Trigger: CGCACATGAGAAGTTCACCAAGGAACTGAAGTACGT...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTTGAGCGAAGGCAGTTaGATGAGGTGCTCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNLSEGS*MRCSAQ
Trigger: CTGCGCCGAGCACCTCATCAAACTGCCTTCGCTCAA...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACCCGCTGATGCTCCTCTaGTTGCTACAAAGTCCACTT +
Preference number: 5 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNPLMLL*LLQSPL
Trigger: AAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGG...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACCACCTCGTGAGGGAGTaGGAGACATTTGGAAATCAG +
Preference number: 5 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNHLVRE*ETFGNQ
Trigger: CTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAGAAACGGAGGTTGGTTaGTCTTCGGAGCAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPETEVG*SSEQVG
Trigger: CCCCACCTGCTCCGAAGACAAACCAACCTCCGTTTC...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp AATGGCATTTGCTGCTGTCCCTGGAATGATGAGGGAACACCAAGGGGCCACACATGTAAATCTTTTTCTTaGCTTGGGCGCTGTGTCGAA +
Preference number: 5 (lower is better)
Translates to: NGICCCPWNDEGTPRGHTCKSFS*LGRCVE
Trigger: TTCGACACAGCGCCCAAGCAAAGAAAAAGATTTACA...TGTGTGGCCCCTTGGTGTTCCCTCATCATTCCAGGGACAGCAGCAAATGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS TCA 90 bp ACACAAAGGACTTTTCCCCACCTCCTCCTGTCCTCCGAAGAAAGCTaGGAGAAGTTCCTCATCATTTCCTTTAGGAAAGGACGATTGGCT +
Preference number: 5 (lower is better)
Translates to: TQRTFPHLLLSSEES*EKFLIISFRKGRLA
Trigger: AGCCAATCGTCCTTTCCTAAAGGAAATGATGAGGAACTTCTCTCAGCTTTCTTCGGAGGACAGGAGGAGGTGGGGAAAAGTCCTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS-3UTR CAA 90 bp GGGGGACCCCAAATAAACCATCAACGGGCTGTTCTGTACAGTGAGGGCTTATTATGCAGTTGGGTGTCGTaGTTGTCGATGATGTTGTAT +
Preference number: 5 (lower is better)
Translates to: GGPQINHQRAVLYSEGLLCSWVS*LSMMLY
Trigger: ATACAACATCATCGACAACAACGACACCCAACTGCA...TAATAAGCCCTCACTGTACAGAACAGCCCGTTGATGGTTTATTTGGGGTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCGGCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGGTGTCAGCTGAGAGCTaGGTGCTGTTCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: AAVSQELFCRGCKRLPALVSAES*VLFMFK
Trigger: TTTAAACATGAACAGCACCAAGCTCTCAGCTGACAC...CAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTCCACTTCCTTCAAATaGGGAAGCTTGGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSSTSFK*GSLAFR
Trigger: TCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGGA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGTTATTTTGTCGCGGTaGCAAACGTCTTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSVILSR*QTSSCL
Trigger: AAGGCAGGAAGACGTTTGCAACCGCGACAAAATAAC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GTGACAGTAGTATTAACCATCAGGAAAAGCAACAGTGCGAGGGGAAAGGTGGCAGGGAGTTGGAGACATTaGGAAATCAGAAACGCACAG +
Preference number: 5 (lower is better)
Translates to: VTVVLTIRKSNSARGKVAGSWRH*EIRNAQ
Trigger: CTGTGCGTTTCTGATTTCCAAATGTCTCCAACTCCC...TGCCACCTTTCCCCTCGCACTGTTGCTTTTCCTGATGGTTAATACTACTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537098.8
ENST00000621537.4
CDS-3UTR CAA 90 bp TGGTGGCCTGGAATGCAGGAGGGGAAAGAGTGTGATGCTGTCTCTGGCTCTACAAGTAAAGAACATTCTTaGAGACTCTCAAAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: WWPGMQEGKECDAVSGSTSKEHS*RLSKLQ
Trigger: CTGAAGCTTTGAGAGTCTCAAAGAATGTTCTTTACT...TGTAGAGCCAGAGACAGCATCACACTCTTTCCCCTCCTGCATTCCAGGCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS CCA 90 bp GTCCACCAGGGTCCGGATCTCTTTCAAGACAACTTCCCAGCGGCTTaGGTTACTCAGCACTTTCTTATATTTGTAAATCTTTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VHQGPDLFQDNFPAA*VTQHFLIFVNLFLG
Trigger: GCCCAGAAAAAGATTTACAAATATAAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTGTCTTGAAAGAGATCCGGACCCTGGTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR CAA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCATTTTCTGGGCAACACTaGCCATCGCTCTGGCAACTG +
Preference number: 5 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPFSGQH*PSLWQL
Trigger: CAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGAAAA...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS-3UTR CAA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAAGTTGGGTGTCGTTGTaGTCGATGATGTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: RPADAPLVATKSTLDQVKSWVSL*SMMLYS
Trigger: GGAATACAACATCATCGACAACAACGACACCCAACT...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACGGTCAAAGACTTCATAAATAAGAGGCGGGTCCCAGACCCGCAATTTGTCAACTGCAGTTGGGTGTCGTaGTTGTCGATGATGTTGTAT +
Preference number: 5 (lower is better)
Translates to: TVKDFINKRRVPDPQFVNCSWVS*LSMMLY
Trigger: ATACAACATCATCGACAACAACGACACCCAACTGCA...GTTGACAAATTGCGGGTCTGGGACCCGCCTCTTATTTATGAAGTCTTTGACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGCATCGGAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAGTGTCAGCTGAGAGCTaGGTGCTGTTCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: GIGVDFSHTTASNTKAKKVSAES*VLFMFK
Trigger: TTTAAACATGAACAGCACCAAGCTCTCAGCTGACAC...TTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTCCGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCGTGTCAGCTGAGAGCTaGGTGCTGTTCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSVSAES*VLFMFK
Trigger: TTTAAACATGAACAGCACCAAGCTCTCAGCTGACAC...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATGGCCGGCTTGGTTTGTaGTTCTCAAACGGTTATGCC +
Preference number: 5 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNGRLGL*FSNGYA
Trigger: GGCATAACCGTTTGAGAACAACAAACCAAGCCGGCC...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS-3UTR CAA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGCACCTCGTGAGGGAGTaGGAGACATTTGGAAATCAG +
Preference number: 5 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGHLVRE*ETFGNQ
Trigger: CTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GGCCACACAGATTACAAGCGCCCCACCCGCTCTAAGTGTGCAATTAAATCCTGCTTTCTTAGAATCTCCTaGTTTTTGATGACCTTGACC +
Preference number: 5 (lower is better)
Translates to: GHTDYKRPTRSKCAIKSCFLRIS*FLMTLT
Trigger: GGTCAAGGTCATCAAAAACAAGGAGATTCTAAGAAA...GCAGGATTTAATTGCACACTTAGAGCGGGTGGGGCGCTTGTAATCTGTGTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATCCTGGGTGGTCAAGTTaGTGTTCTCTGAGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNPGWSS*CSLRAV
Trigger: AACTGCTCTCAGAGAACACAAACTTGACCACCCAGG...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTAGGCAGTCGATGAGGTaGGGCTCGCTGTCGTTGCCT +
Preference number: 5 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIRQSMR*GSLSLP
Trigger: AGGCAACGACAGCGAGCCCAACCTCATCGACTGCCT...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CGACCCGCTGATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAATTGTTGTCGATGATGTaGTATTCCAGCATCAAGCAC +
Preference number: 5 (lower is better)
Translates to: RPADAPLVATKSTLDQVKLLSMM*YSSIKH
Trigger: GTGCTTGATGCTGGAATACAACATCATCGACAACAA...TTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GCTGTTAGTCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTGCCTTGAGCTTGTTGTCGATGATGTaGTATTCCAGCATCAAGCAC +
Preference number: 5 (lower is better)
Translates to: AVSQELFCRGCKRLPALSLLSMM*YSSIKH
Trigger: GTGCTTGATGCTGGAATACAACATCATCGACAACAA...GCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGACTAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS-3UTR CAA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACATCCACTTCCTTCAAATaGGGAAGCTTGGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTSTSFK*GSLAFR
Trigger: TCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGGA...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGCCGCTGATGCTCCTCTaGTTGCTACAAAGTCCACTT +
Preference number: 5 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRPLMLL*LLQSPL
Trigger: AAGTGGACTTTGTAGCAACAAGAGGAGCATCAGCGG...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGCACCTCGTGAGGGAGTaGGAGACATTTGGAAATCAG +
Preference number: 5 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRHLVRE*ETFGNQ
Trigger: CTGATTTCCAAATGTCTCCAACTCCCTCACGAGGTG...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GAGTTGACTTTTCCCACACGACGGCATCAAACACAAAGGCAAAGAAAATCCACAAGTTGGGTGTCGTTGTaGTCGATGATGTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: ELTFPTRRHQTQRQRKSTSWVSL*SMMLYS
Trigger: GGAATACAACATCATCGACAACAACGACACCCAACT...TGTGGATTTTCTTTGCCTTTGTGTTTGATGCCGTCGTGTGGGAAAAGTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGAGTTGGGTGTCGTTGTaGTCGATGATGTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGSWVSL*SMMLYS
Trigger: GGAATACAACATCATCGACAACAACGACACCCAACT...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ATCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTTATTTTGTCGCGGTaGCAAACGTCTTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: ILCTTRITLHSNGEDTGRVILSR*QTSSCL
Trigger: AAGGCAGGAAGACGTTTGCAACCGCGACAAAATAAC...CCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS CCA 90 bp GTCCACCAGGGTCCGGATCTCTTTCAAGACAACTTCCCAGCGGCTTaGGTTACTCAGCACTTTCTTATATTTGTAAATCTTTTTCAAGTT +
Preference number: 5 (lower is better)
Translates to: VHQGPDLFQDNFPAA*VTQHFLIFVNLFQV
Trigger: AACTTGAAAAAGATTTACAAATATAAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTGTCTTGAAAGAGATCCGGACCCTGGTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS-3UTR CAA 90 bp TCTTATGTACAACAAGAATCACTTTGCATAGCAATGGTGAGGACACAGGACGGGTTGTTGTCGATGATGTaGTATTCCAGCATCAAGCAC +
Preference number: 5 (lower is better)
Translates to: SYVQQESLCIAMVRTQDGLLSMM*YSSIKH
Trigger: GTGCTTGATGCTGGAATACAACATCATCGACAACAA...CCCGTCCTGTGTCCTCACCATTGCTATGCAAAGTGATTCTTGTTGTACATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp AATAATACTACCACTAACCCGACAGCTGACTGGTTTATACAGTACTACACGCCAAGTTGGGTGTCGTTGTaGTCGATGATGTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: NNTTTNPTADWFIQYYTPSWVSL*SMMLYS
Trigger: GGAATACAACATCATCGACAACAACGACACCCAACT...TGGCGTGTAGTACTGTATAAACCAGTCAGCTGTCGGGTTAGTGGTAGTATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTGAAGGAGTGTCTTCGTaGCAGTGGTCACATGTGGGG +
Preference number: 5 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIEGVSS*QWSHVG
Trigger: CCCCACATGTGACCACTGCAACGAAGACACTCCTTC...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTTTGTACCTCATCCCGTaGCAAAGCAGAAGAGCCCGG +
Preference number: 5 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRILYLIP*QSRRAR
Trigger: CCGGGCTCTTCTGCTTTGCAACGGGATGAGGTACAA...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS-3UTR CAA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTTTCAGGCTTGGGGAATaGTCGCGGCTGTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRIFRLGE*SRLLMN
Trigger: GTTCATCAACAGCCGCGACAATTCCCCAAGCCTGAA...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp GATGCTCCTCTTGTTGCTACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTTGTTGTCGATGATGTaGTATTCCAGCATCAAGCAC +
Preference number: 5 (lower is better)
Translates to: DAPLVATKSTLDQVKGSNLLSMM*YSSIKH
Trigger: GTGCTTGATGCTGGAATACAACATCATCGACAACAA...ATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGTAGCAACAAGAGGAGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS-3UTR CAA 90 bp CCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCAATCTGTCTAACTGGCTTGTaGTTGTCGATGTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: PNLGGAQKSATIHLQFAICLTGL*LSMLTL
Trigger: CAAGGTCAACATCGACAACAACAAGCCAGTTAGACA...GATTGCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCGAGCACATAACATATTaGCAAGAGATGCACCCAGAA +
Preference number: 5 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCEHITY*QEMHPE
Trigger: TTCTGGGTGCATCTCTTGCAAATATGTTATGTGCTC...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp TACCCCAAATCTAGGAGGGGCTCAGAAATCAGCAACAATTCATTTACAGTTTGCCAATTCATTTACAGTTaGCAATCGCTTAGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: YPKSRRGSEISNNSFTVCQFIYS*QSLRVE
Trigger: CTCTACCCTAAGCGATTGCAAACTGTAAATGAATTG...GCAAACTGTAAATGAATTGTTGCTGATTTCTGAGCCCCTCCTAGATTTGGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp GGTATTTTTGTAATTCTTAGGAACTGCAAAAAGATTCTTCCTGTTGCCGTAATGAATACAAGAAAGGCGTaGTATGGTGAAGCCCCGAGA +
Preference number: 5 (lower is better)
Translates to: GIFVILRNCKKILPVAVMNTRKA*YGEAPR
Trigger: TCTCGGGGCTTCACCATACAACGCCTTTCTTGTATT...CATTACGGCAACAGGAAGAATCTTTTTGCAGTTCCTAAGAATTACAAAAATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS-3UTR CAA 90 bp ACAAAGTCCACTTTAGATCAGGTCAAAGGTTCCAATTACGAAGCTAAAAGAATTTTGTTGTCGATGATGTaGTATTCCAGCATCAAGCAC +
Preference number: 5 (lower is better)
Translates to: TKSTLDQVKGSNYEAKRILLSMM*YSSIKH
Trigger: GTGCTTGATGCTGGAATACAACATCATCGACAACAA...AATTCTTTTAGCTTCGTAATTGGAACCTTTGACCTGATCTAAAGTGGACTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS TCA 72 bp TTCCTCCTAGCTCGTCGGGTGCATGCTCGCGGCGGCTaGCCGGGCTCGGCGGGCGACGGGGAGGGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: FLLARRVHARGG*PGSAGDGEGRG
Trigger: CCCCCGCCCCTCCCCGTCGCCCGCCGAGCCCGGTCAGCCGCCGCGAGCATGCACCCGACGAGCTAGGAGGAA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS GCA 72 bp CGGGGCTCCGGGCTTCCTCCTAGCTCGTCGGGTGCATaGTCGCGGCGGCTGACCGGGCTCGGCGGGCGACGG +
Preference number: 6 (lower is better)
Translates to: RGSGLPPSSSGA*SRRLTGLGGRR
Trigger: CCGTCGCCCGCCGAGCCCGGTCAGCCGCCGCGAGCATGCACCCGACGAGCTAGGAGGAAGCCCGGAGCCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS CAA 90 bp GCGGGGCTGACCATGAGGCAGTCGATGAGGTTGGGCTCGCTGTCGTaGCCTGCGCTGGCCGTCAGCGCCGGCTTGGCAGTGCTGGTGCGT +
Preference number: 6 (lower is better)
Translates to: AGLTMRQSMRLGSLS*PALAVSAGLAVLVR
Trigger: ACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAACCTCATCGACTGCCTCATGGTCAGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp ACCGACTTGAGCCGGGCCTCAGACAGCGTGGCTTCCTaGGACACCAGGTCCGGGCTGGGGTGCAGAAGGCGC +
Preference number: 6 (lower is better)
Translates to: TDLSRASDSVAS*DTRSGLGCRRR
Trigger: GCGCCTTCTGCACCCCAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTCTGAGGCCCGGCTCAAGTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp CTGCGCTGGCCGTCAGCGCCGGCTTGGCAGTGCTGGTaGGTTCCACCTCCACGTGGATCTCACTGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LRWPSAPAWQCW*VPPPRGSHWRP
Trigger: TGGCCTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp CGTTGCCTGCGCTGGCCGTCAGCGCCGGCTTGGCAGTaGTGGTGCGTTCCACCTCCACGTGGATCTCACTGG +
Preference number: 6 (lower is better)
Translates to: RCLRWPSAPAWQ*WCVPPPRGSHW
Trigger: CCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp GAGGCAGTCGATGAGGTTGGGCTCGCTGTCGTTGCCTaGGCTGGCCGTCAGCGCCGGCTTGGCAGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: EAVDEVGLAVVA*AGRQRRLGSAG
Trigger: ACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAACCTCATCGACTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp TGCCTGCGCTGGCCGTCAGCGCCGGCTTGGCAGTGCTaGTGCGTTCCACCTCCACGTGGATCTCACTGGAGG +
Preference number: 6 (lower is better)
Translates to: CLRWPSAPAWQC*CVPPPRGSHWR
Trigger: CCTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp CGCTGTCGTTGCCTGCGCTGGCCGTCAGCGCCGGCTTaGCAGTGCTGGTGCGTTCCACCTCCACGTGGATCT +
Preference number: 6 (lower is better)
Translates to: RCRCLRWPSAPA*QCWCVPPPRGS
Trigger: AGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp CTGCGCTGTCCACGGGATCAGGGGGCAGTGAGCAAGTaGGATGCTGGAGCAGCTAGAGGCTCCCCGCCCGCT +
Preference number: 6 (lower is better)
Translates to: LRCPRDQGAVSK*DAGAARGSPPA
Trigger: AGCGGGCGGGGAGCCTCTAGCTGCTCCAGCATCCCACTTGCTCACTGCCCCCTGATCCCGTGGACAGCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565029.5
ENST00000566513.5
CDS CAA 72 bp CTGCAGGCGGGGCTGACCATGAGGCAGTCGATGAGGTaGGGCTCGCTGTCGTTGCCTGCGCTGGCCGTCAGC +
Preference number: 6 (lower is better)
Translates to: LQAGLTMRQSMR*GSLSLPALAVS
Trigger: GCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAACCTCATCGACTGCCTCATGGTCAGCCCCGCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CAA 72 bp TCCATGTACCCAGTTGGCGTGGCGGACGCCAGGCTGTaGTCGGCCAGCGTTAGGTGGTGCGGCTCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: SMYPVGVADARL*SASVRWCGSQR
Trigger: GCGCTGGGAGCCGCACCACCTAACGCTGGCCGACAACAGCCTGGCGTCCGCCACGCCAACTGGGTACATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS CAA 90 bp AGGTTGGGCTCGCTGTCGTTGCCTGCGCTGGCCGTCAGCGCCGGCTaGGCAGTGCTGGTGCGTTCCACCTCCACGTGGATCTCACTGGAG +
Preference number: 6 (lower is better)
Translates to: RLGSLSLPALAVSAG*AVLVRSTSTWISLE
Trigger: CTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp CCCCTCCGGGGCTGTAGAGCTGGAACCAGCCATCTTTaGCGGCCCGCACGCTCAGCAGGCATGAGTGGACCT +
Preference number: 6 (lower is better)
Translates to: PLRGCRAGTSHL*RPARSAGMSGP
Trigger: AGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCAGCTCTACAGCCCCGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000565680.1
ENST00000566513.5
ENST00000569146.1
ENST00000621537.4
ENST00000623842.1
CDS GCA 72 bp GCGGACGCCAGGCTGTTGTCGGCCAGCGTTAGGTGGTaGGGCTCCCAGCGCCTCAGGAATTTCGAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: ADARLLSASVRW*GSQRLRNFEVR
Trigger: CCTCACCTCGAAATTCCTGAGGCGCTGGGAGCCGCACCACCTAACGCTGGCCGACAACAGCCTGGCGTCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS GCA 72 bp CTCGGGCTGGGAAGCCGCCAGCTCCCTGCGCTTTCTTaGACCGAATCCTCACATTGTAGGGTGGGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LGLGSRQLPALS*TESSHCRVGAG
Trigger: CCCCGCCCCCACCCTACAATGTGAGGATTCGGTGCAAGAAAGCGCAGGGAGCTGGCGGCTTCCCAGCCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CCA 72 bp GTGGCGGACGCCAGGCTGTTGTCGGCCAGCGTTAGGTaGTGCGGCTCCCAGCGCCTCAGGAATTTCGAGGTG +
Preference number: 6 (lower is better)
Translates to: VADARLLSASVR*CGSQRLRNFEV
Trigger: CACCTCGAAATTCCTGAGGCGCTGGGAGCCGCACCACCTAACGCTGGCCGACAACAGCCTGGCGTCCGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS CAA 72 bp ACCATGAGGCAGTCGATGAGGTTGGGCTCGCTGTCGTaGCCTGCGCTGGCCGTCAGCGCCGGCTTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: TMRQSMRLGSLS*PALAVSAGLAV
Trigger: CACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAACCTCATCGACTGCCTCATGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp CCGGGGTCTCGCACAGGTTCAGCACCTGGAGCATGGTaGGGTGTTCCGACAGGAGCCGAAGGCCAGCGTCTC +
Preference number: 6 (lower is better)
Translates to: PGSRTGSAPGAW*GVPTGAEGQRL
Trigger: GAGACGCTGGCCTTCGGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGCTGAACCTGTGCGAGACCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000561605.1
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp GCCTCTGACTGCGCTGTCCACGGGATCAGGGGGCAGTaGGCAAGTGGGATGCTGGAGCAGCTAGAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: ASDCAVHGIRGQ*ASGMLEQLEAP
Trigger: GGGAGCCTCTAGCTGCTCCAGCATCCCACTTGCTCACTGCCCCCTGATCCCGTGGACAGCGCAGTCAGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565029.5
ENST00000566513.5
CDS GCA 72 bp GGCCCGCCTTTCCTTTGCAGCTCCTTCAGCTCCCGCTaGCGGTCACACAGCTGCTCGTACATGCGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: GPPFLCSSFSSR*RSHSCSYMRFP
Trigger: GGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCAGCGGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp AGCCAGCGGCAAGCAGAGACAGCAGGCAGAGCCTCCTaGTTCCCGTCTGGCAGAGTCAGCCACTCCAGCGCT +
Preference number: 6 (lower is better)
Translates to: SQRQAETAGRAS*FPSGRVSHSSA
Trigger: AGCGCTGGAGTGGCTGACTCTGCCAGACGGGAAGCAGGAGGCTCTGCCTGCTGTCTCTGCTTGCCGCTGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CCA 72 bp GCCGGCTTGGCAGTGCTGGTGCGTTCCACCTCCACGTaGATCTCACTGGAGGCCACGACCACCGACTTGAGC +
Preference number: 6 (lower is better)
Translates to: AGLAVLVRSTST*ISLEATTTDLS
Trigger: GCTCAAGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGGAGGTGGAACGCACCAGCACTGCCAAGCCGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp CCACGTGGATCTCACTGGAGGCCACGACCACCGACTTaGGCCGGGCCTCAGACAGCGTGGCTTCCTGAGACA +
Preference number: 6 (lower is better)
Translates to: PRGSHWRPRPPT*AGPQTAWLPET
Trigger: TGTCTCAGGAAGCCACGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp TCACGCCCTGGTCCTGACGTCAAGGTTTCCATCGCCTaGGCCATGGGGCACAACTCAGGCTCCTCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: SRPGPDVKVSIA*AMGHNSGSSGG
Trigger: GCCACCCGAGGAGCCTGAGTTGTGCCCCATGGCTCAGGCGATGGAAACCTTGACGTCAGGACCAGGGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS GCA 72 bp AGGCGCAGAGGTAAAGTGGGCTTCCGGTCGCACGGCTaGTGGCAGCCGTTCCGGATTTCCTTCAGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RRRGKVGFRSHG*WQPFRISFRLG
Trigger: CCCAAGCCTGAAGGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAAGCCCACTTTACCTCTGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp TGCAGCTCCTTCAGCTCCCGCTGCCGGTCACACAGCTaGTCGTACATGCGCTTCCCCACGTCTGTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: CSSFSSRCRSHS*SYMRFPTSVLS
Trigger: GGAGAGCACAGACGTGGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCAGCGGGAGCTGAAGGAGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp CTGCCAGCAGGAGGATGTGGCAGAAGTGATGCCGCCTaGCTCCACCATGGTCTGGTTCCCCCTCAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: LPAGGCGRSDAA*LHHGLVPPQCQ
Trigger: CTGGCACTGAGGGGGAACCAGACCATGGTGGAGGCAGGCGGCATCACTTCTGCCACATCCTCCTGCTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565680.1
CDS CCA 72 bp CAGACAGCGTGGCTTCCTGAGACACCAGGTCCGGGCTaGGGTGCAGAAGGCGCAGAGGTAAAGTGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: QTAWLPETPGPG*GAEGAEVKWAS
Trigger: GGAAGCCCACTTTACCTCTGCGCCTTCTGCACCCCAGCCCGGACCTGGTGTCTCAGGAAGCCACGCTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp GCGTCTGTGACCGGGGTCTCGCACAGGTTCAGCACCTaGAGCATGGTGAGGTGTTCCGACAGGAGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: ASVTGVSHRFST*SMVRCSDRSRR
Trigger: CCTTCGGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGCTGAACCTGTGCGAGACCCCGGTCACAGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000561605.1
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp GAATGTGCCCCTTGCCAGGAGAGGAGTGACTCAGAATaGACTGGAAGCACGTCGCGCCAGGCAGGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: ECAPCQERSDSE*TGSTSRQAGAA
Trigger: AGCAGCCCCTGCCTGGCGCGACGTGCTTCCAGTGCATTCTGAGTCACTCCTCTCCTGGCAAGGGGCACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398040.8
ENST00000564666.1
CDS GCA 72 bp TCAGCTCCCGCTGCCGGTCACACAGCTGCTCGTACATaGGCTTCCCCACGTCTGTGCTCTCCAGGGTTGAGA +
Preference number: 6 (lower is better)
Translates to: SAPAAGHTAART*ASPRLCSPGLR
Trigger: TCTCAACCCTGGAGAGCACAGACGTGGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCAGCGGGAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp TTCCCCTTGGGGGAAGGGTTGGGAGGCCGTGTCTGCTaGTCCCTCATTAGCTCGGAGTCCGGCTCTGGATCT +
Preference number: 6 (lower is better)
Translates to: FPLGEGLGGRVC*SLISSESGSGS
Trigger: AGATCCAGAGCCGGACTCCGAGCTAATGAGGGAGCAGCAGACACGGCCTCCCAACCCTTCCCCCAAGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565029.5
ENST00000566513.5
CDS CCA 72 bp CGCAGAGGTAAAGTGGGCTTCCGGTCGCACGGCTGCTaGCAGCCGTTCCGGATTTCCTTCAGGCTTGGGGAA +
Preference number: 6 (lower is better)
Translates to: RRGKVGFRSHGC*QPFRISFRLGE
Trigger: TTCCCCAAGCCTGAAGGAAATCCGGAACGGCTGCCAGCAGCCGTGCGACCGGAAGCCCACTTTACCTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp CAGCGTCTGTGGACTTGGAGGGCAGTGTTAGCCTGGTaGGCCCGCCTTTCCTTTGCAGCTCCTTCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: QRLWTWRAVLAW*ARLSFAAPSAP
Trigger: GGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGGCCCACCAGGCTAACACTGCCCTCCAAGTCCACAGACGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp CCAGCCATCTTTGCCGGCCCGCACGCTCAGCAGGCATaGGTGGACCTGCCAGACAAGGGAAGACACAAGTGT +
Preference number: 6 (lower is better)
Translates to: PAIFAGPHAQQA*VDLPDKGRHKC
Trigger: ACACTTGTGTCTTCCCTTGTCTGGCAGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS GCA 72 bp GTGTCGAAGCCAGAGAGCGGTTGGGACAGGGGCTGCTaGCTCCCTGGATTTGAGGCAGAGTTAGTTCCGCCT +
Preference number: 6 (lower is better)
Translates to: VSKPESGWDRGC*LPGFEAELVPP
Trigger: AGGCGGAACTAACTCTGCCTCAAATCCAGGGAGGCAGCAGCCCCTGTCCCAACCGCTCTCTGGCTTCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS CCA 72 bp CGGGGCCTCATGTTCTGGGCGCTGGGGTCTGGGTGTTaGGGCAGGGTGACTCACCATGTTATGCTTGAGGAT +
Preference number: 6 (lower is better)
Translates to: RGLMFWALGSGC*GRVTHHVMLED
Trigger: ATCCTCAAGCATAACATGGTGAGTCACCCTGCCCCAACACCCAGACCCCAGCGCCCAGAACATGAGGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS CCA 72 bp CCATCTTTGCCGGCCCGCACGCTCAGCAGGCATGAGTaGACCTGCCAGACAAGGGAAGACACAAGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: PSLPARTLSRHE*TCQTREDTSVS
Trigger: GCTCACACTTGTGTCTTCCCTTGTCTGGCAGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CAA 72 bp CAGGAAACAGAGCGGCAGCCCGGCCGGCTTGGTTTGTaGTTCTCAAACGGTTATGCCATGCACGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: QETERQPGRLGL*FSNGYAMHAQP
Trigger: GGGCTGGGCGTGCATGGCATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCCGCTCTGTTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS CAA 72 bp GGCTCCCAGCGCCTCAGGAATTTCGAGGTGAGGATCTaGCTGAGAAAGGTCCGCGGGTGCCGGATGACACAG +
Preference number: 6 (lower is better)
Translates to: GSQRLRNFEVRI*LRKVRGCRMTQ
Trigger: CTGTGTCATCCGGCACCCGCGGACCTTTCTCAGCAAGATCCTCACCTCGAAATTCCTGAGGCGCTGGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS CAA 90 bp CCCTCCTCGCAGGAAACAGAGCGGCAGCCCGGCCGGCTTGGTTTGTaGTTCTCAAACGGTTATGCCATGCACGCCCAGCCCATCCAAGAA +
Preference number: 6 (lower is better)
Translates to: PSSQETERQPGRLGL*FSNGYAMHAQPIQE
Trigger: TTCTTGGATGGGCTGGGCGTGCATGGCATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCCGCTCTGTTTCCTGCGAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS CAA 90 bp CTTCCCTCCTCGCAGGAAACAGAGCGGCAGCCCGGCCGGCTTGGTTaGTTGTTCTCAAACGGTTATGCCATGCACGCCCAGCCCATCCAA +
Preference number: 6 (lower is better)
Translates to: LPSSQETERQPGRLG*LFSNGYAMHAQPIQ
Trigger: TTGGATGGGCTGGGCGTGCATGGCATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCCGCTCTGTTTCCTGCGAGGAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS TCA 72 bp AGGAATCCTGAGTGTTCCCTGGGTCCTCCCAACACGTaGCATGGCACCCAGCTCTGCATGGGGCCAGCTGTT +
Preference number: 6 (lower is better)
Translates to: RNPECSLGPPNT*HGTQLCMGPAV
Trigger: AACAGCTGGCCCCATGCAGAGCTGGGTGCCATGTCACGTGTTGGGAGGACCCAGGGAACACTCAGGATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS TCA 72 bp GAGCGGTTGGGACAGGGGCTGCTGCCTCCCTGGATTTaGGGCAGAGTTAGTTCCGCCTCTCTGACATCATGG +
Preference number: 6 (lower is better)
Translates to: ERLGQGLLPPWI*GRVSSASLTSW
Trigger: CCATGATGTCAGAGAGGCGGAACTAACTCTGCCTCAAATCCAGGGAGGCAGCAGCCCCTGTCCCAACCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS GCA 72 bp TGCCAGGGTTCTCAGGCCAGGGAAAGCAGAGCCTGTTaGTCCTCCACGGGAGACAAGTCGTCAGCAGGAATG +
Preference number: 6 (lower is better)
Translates to: CQGSQARESRAC*SSTGDKSSAGM
Trigger: CATTCCTGCTGACGACTTGTCTCCCGTGGAGGAGCAACAGGCTCTGCTTTCCCTGGCCTGAGAACCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398040.8
ENST00000564666.1
CDS GCA 72 bp ACGTGTCTCAAGAGAACTGCCAAGAGGAGCCACCACTaGCTCCCAGAATGCATGGGCCACGGAGGGAAGACC +
Preference number: 6 (lower is better)
Translates to: TCLKRTAKRSHH*LPECMGHGGKT
Trigger: GGTCTTCCCTCCGTGGCCCATGCATTCTGGGAGGCAGTGGTGGCTCCTCTTGGCAGTTCTCTTGAGACACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569146.1
CDS CCA 72 bp AGTCAGCGTCTGTGGACTTGGAGGGCAGTGTTAGCCTaGTGGGCCCGCCTTTCCTTTGCAGCTCCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SQRLWTWRAVLA*WARLSFAAPSA
Trigger: AGCTGAAGGAGCTGCAAAGGAAAGGCGGGCCCACCAGGCTAACACTGCCCTCCAAGTCCACAGACGCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp CTCCTCGCAGGAAACAGAGCGGCAGCCCGGCCGGCTTaGTTTGTTGTTCTCAAACGGTTATGCCATGCACGC +
Preference number: 6 (lower is better)
Translates to: LLAGNRAAARPA*FVVLKRLCHAR
Trigger: GCGTGCATGGCATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCCGCTCTGTTTCCTGCGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS CCA 72 bp CTTCGGCGAACCTCTGAATCACGTACTTCAGTTCCCTaGAAGAGACGAGGCGGCCGGAGTTACTGCCGGGGT +
Preference number: 6 (lower is better)
Translates to: LRRTSESRTSVP*KRRGGRSYCRG
Trigger: ACCCCGGCAGTAACTCCGGCCGCCTCGTCTCTTCCAGGGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569146.1
CDS CAA 72 bp TCGCAGGAAACAGAGCGGCAGCCCGGCCGGCTTGGTTaGTTGTTCTCAAACGGTTATGCCATGCACGCCCAG +
Preference number: 6 (lower is better)
Translates to: SQETERQPGRLG*LFSNGYAMHAQ
Trigger: CTGGGCGTGCATGGCATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCCGCTCTGTTTCCTGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS CAA 72 bp CCTCCTCGCAGGAAACAGAGCGGCAGCCCGGCCGGCTaGGTTTGTTGTTCTCAAACGGTTATGCCATGCACG +
Preference number: 6 (lower is better)
Translates to: PPRRKQSGSPAG*VCCSQTVMPCT
Trigger: CGTGCATGGCATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCCGCTCTGTTTCCTGCGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS CAA 90 bp TGTAACTTCCCTCCTCGCAGGAAACAGAGCGGCAGCCCGGCCGGCTaGGTTTGTTGTTCTCAAACGGTTATGCCATGCACGCCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: CNFPPRRKQSGSPAG*VCCSQTVMPCTPSP
Trigger: TGGGCTGGGCGTGCATGGCATAACCGTTTGAGAACAACAAACCAAGCCGGCCGGGCTGCCGCTCTGTTTCCTGCGAGGAGGGAAGTTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS CAA 90 bp TGCTGCTCCCTCATTAGCTCGGAGTCCGGCTCTGGATCTGAGGAGTaGCAAGCCGCCTCCTCCTCCTCCTTTTCCTCTGCTTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: CCSLISSESGSGSEE*QAASSSSFSSASSS
Trigger: AGAGGAGGAAGCAGAGGAAAAGGAGGAGGAGGAGGCGGCTTGCAACTCCTCAGATCCAGAGCCGGACTCCGAGCTAATGAGGGAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565029.5
ENST00000566513.5
CDS TCA 72 bp CTGAGAAAGGTCCGCGGGTGCCGGATGACACAGACCTaGATGTCGCCCTCCTGCAGCAGTTTGTACCTCATC +
Preference number: 6 (lower is better)
Translates to: LRKVRGCRMTQT*MSPSCSSLYLI
Trigger: GATGAGGTACAAACTGCTGCAGGAGGGCGACATTCAGGTCTGTGTCATCCGGCACCCGCGGACCTTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS TCA 72 bp CTCCCTGGATTTGAGGCAGAGTTAGTTCCGCCTCTCTaGCATCATGGAAACGGAGGCCCTCGGAAGGCGGAG +
Preference number: 6 (lower is better)
Translates to: LPGFEAELVPPL*HHGNGGPRKAE
Trigger: CTCCGCCTTCCGAGGGCCTCCGTTTCCATGATGTCAGAGAGGCGGAACTAACTCTGCCTCAAATCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS TCA 72 bp ATGAGTGGACCTGCCAGACAAGGGAAGACACAAGTGTaGGCTGCATGCAGCCCCGGTGACAAGGGCGACCAT +
Preference number: 6 (lower is better)
Translates to: MSGPARQGKTQV*AACSPGDKGDH
Trigger: ATGGTCGCCCTTGTCACCGGGGCTGCATGCAGCTCACACTTGTGTCTTCCCTTGTCTGGCAGGTCCACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS GCA 72 bp AGCCTCAGTCGCGGGCACTTCCCAAAGTCCATGTTATaGTTGAGGATTCGCTGCACCACGGGGGTGAACACC +
Preference number: 6 (lower is better)
Translates to: SLSRGHFPKSML*LRIRCTTGVNT
Trigger: GGTGTTCACCCCCGTGGTGCAGCGAATCCTCAAGCATAACATGGACTTTGGGAAGTGCCCGCGACTGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp CAGAGTCAGCCACTCCAGCGCTGTCCTCACCCTCTCTaGTTGTCAAGGAAGGGACGTTACCTGGGCAACACT +
Preference number: 6 (lower is better)
Translates to: QSQPLQRCPHPL*LSRKGRYLGNT
Trigger: AGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAGCAGAGAGGGTGAGGACAGCGCTGGAGTGGCTGACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CCA 72 bp TGCCCCCTTTCTCCTTCTGCTATGCCTTCCTCTGGGTaGGGCCATCTCCTGGGTCTCCGTTCTCTGTTTGGT +
Preference number: 6 (lower is better)
Translates to: CPLSPSAMPSSG*GHLLGLRSLFG
Trigger: ACCAAACAGAGAACGGAGACCCAGGAGATGGCCCCACCCAGAGGAAGGCATAGCAGAAGGAGAAAGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CAA 72 bp CTCAGTCGCGGGCACTTCCCAAAGTCCATGTTATGCTaGAGGATTCGCTGCACCACGGGGGTGAACACCTCG +
Preference number: 6 (lower is better)
Translates to: LSRGHFPKSMLC*RIRCTTGVNTS
Trigger: CGAGGTGTTCACCCCCGTGGTGCAGCGAATCCTCAAGCATAACATGGACTTTGGGAAGTGCCCGCGACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CAA 90 bp GTAAACAGCCTCAGTCGCGGGCACTTCCCAAAGTCCATGTTATGCTaGAGGATTCGCTGCACCACGGGGGTGAACACCTCGATGACCACC +
Preference number: 6 (lower is better)
Translates to: VNSLSRGHFPKSMLC*RIRCTTGVNTSMTT
Trigger: GGTGGTCATCGAGGTGTTCACCCCCGTGGTGCAGCGAATCCTCAAGCATAACATGGACTTTGGGAAGTGCCCGCGACTGAGGCTGTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CAA 90 bp AGCGAAGGCAGTTTGATGAGGTGCTCGGCGCAGGCACTGGTTACATaGGTGAAGGCCAAACTGAGGTTCTCCAGGTTTCCGAAGGAGCCG +
Preference number: 6 (lower is better)
Translates to: SEGSLMRCSAQALVT*VKAKLRFSRFPKEP
Trigger: CGGCTCCTTCGGAAACCTGGAGAACCTCAGTTTGGCCTTCACCAATGTAACCAGTGCCTGCGCCGAGCACCTCATCAAACTGCCTTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000561605.1
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp CCCGCGTTGAGCTCGTTCAAGGCAAGGATGTACTCCTaGGTAAACAGCCTCAGTCGCGGGCACTTCCCAAAG +
Preference number: 6 (lower is better)
Translates to: PALSSFKARMYS*VNSLSRGHFPK
Trigger: CTTTGGGAAGTGCCCGCGACTGAGGCTGTTTACTCAGGAGTACATCCTTGCCTTGAACGAGCTCAACGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp GAGTGGACCTCTTGCCTGGGGTCTTCGGCGAACCTCTaGATCACGTACTTCAGTTCCCTGGAAGAGACGAGG +
Preference number: 6 (lower is better)
Translates to: EWTSCLGSSANL*ITYFSSLEETR
Trigger: CCTCGTCTCTTCCAGGGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGACCCCAGGCAAGAGGTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569146.1
CDS TCA 72 bp TTCCTCCAGCAACCCCCAGCCTTCCACCAAATGCCATaGAAGGTCTTTCGGGAAATACCGTGGCCCCCACAC +
Preference number: 6 (lower is better)
Translates to: FLQQPPAFHQMP*KVFREIPWPPH
Trigger: GTGTGGGGGCCACGGTATTTCCCGAAAGACCTTTCATGGCATTTGGTGGAAGGCTGGGGGTTGCTGGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS TCA 72 bp AGCCCCGGTGACAAGGGCGACCATGATCTGCACACATaGATGGGAAAGGCTCAGGCAAGTCCTGCAGTCAAG +
Preference number: 6 (lower is better)
Translates to: SPGDKGDHDLHT*MGKAQASPAVK
Trigger: CTTGACTGCAGGACTTGCCTGAGCCTTTCCCATTCATGTGTGCAGATCATGGTCGCCCTTGTCACCGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS GCA 72 bp ATCGCTCTGGCAACTGTCAGCAGAGGCAAGCACATATaGCAGGGTTCTCAGGCCAGGGAAAGCAGAGCCTGT +
Preference number: 6 (lower is better)
Translates to: IALATVSRGKHI*QGSQARESRAC
Trigger: ACAGGCTCTGCTTTCCCTGGCCTGAGAACCCTGGCATATGTGCTTGCCTCTGCTGACAGTTGCCAGAGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398040.8
ENST00000564666.1
CDS CCA 72 bp CTCACCCTCTCTGCTTGTCAAGGAAGGGACGTTACCTaGGCAACACTTGCCATCGCTCTGGCAACTGTCAGC +
Preference number: 6 (lower is better)
Translates to: LTLSACQGRDVT*ATLAIALATVS
Trigger: GCTGACAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAGCAGAGAGGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CAA 72 bp CTGCTTGTCAAGGAAGGGACGTTACCTGGGCAACACTaGCCATCGCTCTGGCAACTGTCAGCAGAGGCAAGC +
Preference number: 6 (lower is better)
Translates to: LLVKEGTLPGQH*PSLWQLSAEAS
Trigger: GCTTGCCTCTGCTGACAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CAA 90 bp TCACCCTCTCTGCTTGTCAAGGAAGGGACGTTACCTGGGCAACACTaGCCATCGCTCTGGCAACTGTCAGCAGAGGCAAGCACATATGCC +
Preference number: 6 (lower is better)
Translates to: SPSLLVKEGTLPGQH*PSLWQLSAEASTYA
Trigger: GGCATATGTGCTTGCCTCTGCTGACAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAGCAGAGAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS TCA 72 bp TGGCAGCCTGCAGTAAGACAGTTCCCCCAGGAATCGTaGGCTGTAAACAGTACTTCGGGGCATTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: WQPAVRQFPQES*AVNSTSGHSPR
Trigger: CCTGGGAGAATGCCCCGAAGTACTGTTTACAGCTCACGATTCCTGGGGGAACTGTCTTACTGCAGGCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS TCA 72 bp CAGCAGCTGAACGTCTTCAATTGCGCTGTAGGAGACTaGGTTTTCCATGTACCCAGTTGGCGTGGCGGACGC +
Preference number: 6 (lower is better)
Translates to: QQLNVFNCAVGD*VFHVPSWRGGR
Trigger: GCGTCCGCCACGCCAACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS GCA 72 bp AGTCTGTGGCCCTTTACTCCTGGAAGAAGCCATGTGTaGCTGGCCAAGGAAGGGCTTGGAAACAGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: SLWPFTPGRSHV*LAKEGLGNRRP
Trigger: AGGCCTTCTGTTTCCAAGCCCTTCCTTGGCCAGGCACACATGGCTTCTTCCAGGAGTAAAGGGCCACAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS GCA 72 bp GAAGCTCCCAGGGGCAGCGCCTCAATTTGTCATCGCTaGACAAACATCTCTGCTGAGTTCAGTGTGGACAGC +
Preference number: 6 (lower is better)
Translates to: EAPRGSASICHR*TNISAEFSVDS
Trigger: GCTGTCCACACTGAACTCAGCAGAGATGTTTGTGCAGCGATGACAAATTGAGGCGCTGCCCCTGGGAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS GCA 72 bp TGCTTGTCAAGGAAGGGACGTTACCTGGGCAACACTTaGCATCGCTCTGGCAACTGTCAGCAGAGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: CLSRKGRYLGNT*HRSGNCQQRQA
Trigger: TGCTTGCCTCTGCTGACAGTTGCCAGAGCGATGGCAAGTGTTGCCCAGGTAACGTCCCTTCCTTGACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CCA 72 bp TTGAGTGTGGGAGCACCAGTGACCAGTAAATGGAGCTaGTTTTCTCAGCAAGTGGAGTCGGCGAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSVGAPVTSKWS*FSQQVESARLL
Trigger: CAGCAGCCTCGCCGACTCCACTTGCTGAGAAAACCAGCTCCATTTACTGGTCACTGGTGCTCCCACACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 72 bp CCCAGTTTGAGTGTGGGAGCACCAGTGACCAGTAAATaGAGCTGGTTTTCTCAGCAAGTGGAGTCGGCGAGG +
Preference number: 6 (lower is better)
Translates to: PSLSVGAPVTSK*SWFSQQVESAR
Trigger: CCTCGCCGACTCCACTTGCTGAGAAAACCAGCTCCATTTACTGGTCACTGGTGCTCCCACACTCAAACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 72 bp AACCAGAATCTCAACCCCAGTTCCTGGCTGTCACGCTaGGCCAACCACATTCCCCAAATCTGTGCCAACGCA +
Preference number: 6 (lower is better)
Translates to: NQNLNPSSWLSR*ANHIPQICANA
Trigger: TGCGTTGGCACAGATTTGGGGAATGTGGTTGGCCCAGCGTGACAGCCAGGAACTGGGGTTGAGATTCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566462.2
CDS CAA 72 bp TTGTTAGGTCTCATCCCCACTTCCTTCCCTGAGTCTTaGTCCCCCTCCACTGAAGGATCTGTCCGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: LLGLIPTSFPES*SPSTEGSVRGW
Trigger: CCAGCCACGGACAGATCCTTCAGTGGAGGGGGACAAAGACTCAGGGAAGGAAGTGGGGATGAGACCTAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS TCA 72 bp TGTGGCTCCCCAGCTTACTGTAAGGATGACAGCTTATaGCACACTGGTCATTCCAGCCATACCCGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: CGSPAYCKDDSL*HTGHSSHTRCG
Trigger: CCCACAGCGGGTATGGCTGGAATGACCAGTGTGTCATAAGCTGTCATCCTTACAGTAAGCTGGGGAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS GCA 72 bp ACTGAAGGATCTGTCCGTGGCTGGGGGCAATTTCAGTaGCAAAAGCACAGCTCTCACATTCCTTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: TEGSVRGWGQFQ*QKHSSHIPSQS
Trigger: GCTCTGGGAAGGAATGTGAGAGCTGTGCTTTTGGCACTGAAATTGCCCCCAGCCACGGACAGATCCTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS GCA 72 bp TTTGTTTCCTCCAGCAACCCCCAGCCTTCCACCAAATaGCATGAAAGGTCTTTCGGGAAATACCGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: FVSSSNPQPSTK*HERSFGKYRGP
Trigger: GGGGCCACGGTATTTCCCGAAAGACCTTTCATGGCATTTGGTGGAAGGCTGGGGGTTGCTGGAGGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CCA 72 bp CTTATGACACACTGGTCATTCCAGCCATACCCGCTGTaGGGCCAGGGGCCTGTCAAAGCTTGTTCTAAACCA +
Preference number: 6 (lower is better)
Translates to: LMTHWSFQPYPL*GQGPVKACSKP
Trigger: TGGTTTAGAACAAGCTTTGACAGGCCCCTGGCCCCACAGCGGGTATGGCTGGAATGACCAGTGTGTCATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS CCA 72 bp CCGGTGACAAGGGCGACCATGATCTGCACACATGAATaGGAAAGGCTCAGGCAAGTCCTGCAGTCAAGAAAC +
Preference number: 6 (lower is better)
Translates to: PVTRATMICTHE*ERLRQVLQSRN
Trigger: GTTTCTTGACTGCAGGACTTGCCTGAGCCTTTCCCATTCATGTGTGCAGATCATGGTCGCCCTTGTCACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CAA 72 bp AGTTTGATGAGGTGCTCGGCGCAGGCACTGGTTACATaGGTGAAGGCCAAACTGAGGTTCTCCAGGTTTCCG +
Preference number: 6 (lower is better)
Translates to: SLMRCSAQALVT*VKAKLRFSRFP
Trigger: CGGAAACCTGGAGAACCTCAGTTTGGCCTTCACCAATGTAACCAGTGCCTGCGCCGAGCACCTCATCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000561605.1
ENST00000566513.5
ENST00000621537.4
CDS CAA 72 bp CTGGGTGGGGCCATCTCCTGGGTCTCCGTTCTCTGTTaGGTTCTCTGTCCTCCTCTCTCTGTGTTTCTAACT +
Preference number: 6 (lower is better)
Translates to: LGGAISWVSVLC*VLCPPLSVFLT
Trigger: AGTTAGAAACACAGAGAGAGGAGGACAGAGAACCAAACAGAGAACGGAGACCCAGGAGATGGCCCCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CAA 90 bp AGTACTTCGGGGCATTCTCCCAGGACAGCAGCTGAACGTCTTCAATaGCGCTGTAGGAGACTGAGTTTTCCATGTACCCAGTTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: STSGHSPRTAAERLQ*RCRRLSFPCTQLAW
Trigger: CCACGCCAACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGCTGCTGTCCTGGGAGAATGCCCCGAAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537098.8
CDS TCA 72 bp GAGTGGACCTCTTGCCTGGGGTCTTCGGCGAACCTCTaGATCACGTACTTCAGTTCCTTGGTGAACTTCTCA +
Preference number: 6 (lower is better)
Translates to: EWTSCLGSSANL*ITYFSSLVNFS
Trigger: TGAGAAGTTCACCAAGGAACTGAAGTACGTGATTCAGAGGTTCGCCGAAGACCCCAGGCAAGAGGTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000565680.1
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp CAGCAGCTGAACGTCTTCAATTGCGCTGTAGGAGACTaGGTTTTCCATGTACCCAGTTGGCTCAGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: QQLNVFNCAVGD*VFHVPSWLSSL
Trigger: CAGGCTGCTGAGCCAACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS TCA 72 bp TGGGGCAATGACATGTGTCGTCTTCTCACTGTGCTGTaGGAGCTGAGTGCAACTGGGAAAGCCAAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: WGNDMCRLLTVL*ELSATGKAKCL
Trigger: CAAGCACTTGGCTTTCCCAGTTGCACTCAGCTCTCACAGCACAGTGAGAAGACGACACATGTCATTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 72 bp AGGCTTCGGTGTAGCGGACGTCCACTTCCTTCAAATTaGGAAGCTTGGCCTTCAGATCTTCGTAGGTGTCAG +
Preference number: 6 (lower is better)
Translates to: RLRCSGRPLPSN*EAWPSDLRRCQ
Trigger: CTGACACCTACGAAGATCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGGACGTCCGCTACACCGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp GTAAACACTAGTTCTCTTCCCCTTTGCAACCCAACGTaGAGACTCAGCTCAGCTTCTGAGACTTGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: VNTSSLPLCNPT*RLSSASETWPH
Trigger: GTGGGGCCAAGTCTCAGAAGCTGAGCTGAGTCTCCACGTTGGGTTGCAAAGGGGAAGAGAACTAGTGTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS CAA 72 bp CTCATGTGCGAGAGCTTCTTTGGGGAATGGAATGGGTaGAAGCAAACTGGCCAGAGACGGTCTCCAGTCATC +
Preference number: 6 (lower is better)
Translates to: LMCESFFGEWNG*KQTGQRRSPVI
Trigger: GATGACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCTCTCGCACATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000565680.1
ENST00000566513.5
ENST00000621537.4
CDS CAA 72 bp GGGCATTCTCCCAGGACAGCAGCTGAACGTCTTCAATaGCGCTGTAGGAGACTGAGTTTTCCATGTACCCAG +
Preference number: 6 (lower is better)
Translates to: GHSPRTAAERLQ*RCRRLSFPCTQ
Trigger: CTGGGTACATGGAAAACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGCTGCTGTCCTGGGAGAATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537098.8
ENST00000539778.6
ENST00000621537.4
CDS CAA 90 bp AGTACTTCGGGGCATTCTCCCAGGACAGCAGCTGAACGTCTTCAATaGCGCTGTAGGAGACTGAGTTTTCCATGTACCCAGTTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: STSGHSPRTAAERLQ*RCRRLSFPCTQLAQ
Trigger: CTGAGCCAACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGCTGCTGTCCTGGGAGAATGCCCCGAAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539778.6
CDS CAA 90 bp AGTACTTCGGGGCATTCTCCCAGGACAGCAGCTGAACGTCTTCAATaGCGCTGTAGGAGACTGAGTTTTCCATGTACCCAGTTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: STSGHSPRTAAERLQ*RCRRLSFPCTQLAA
Trigger: AGCAGCCAACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGCTGCTGTCCTGGGAGAATGCCCCGAAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621537.4
CDS TCA 72 bp TCATGTGCGAGAGCTTCTTTGGGGAATGGAATGGGTTaGAGCAAACTGGCCAGAGACGGTCTCCAGTCATCA +
Preference number: 6 (lower is better)
Translates to: SCARASLGNGMG*SKLARDGLQSS
Trigger: TGATGACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCTCTCGCACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000565680.1
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp CAAACTGGCCAGAGACGGTCTCCAGTCATCATAGTCTaGCCTAGAATGAGAGAGGGTGACAGTCAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: QTGQRRSPVIIV*PRMREGDSQLW
Trigger: CCAAAGCTGACTGTCACCCTCTCTCATTCTAGGTCAGACTATGATGACTGGAGACCGTCTCTGGCCAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565680.1
CDS TCA 72 bp CAGCAGCTGAACGTCTTCAATTGCGCTGTAGGAGACTaGGTTTTCCATGTACCCAGTTGGCTGCTCACACTG +
Preference number: 6 (lower is better)
Translates to: QQLNVFNCAVGD*VFHVPSWLLTL
Trigger: CAGTGTGAGCAGCCAACTGGGTACATGGAAAACTCAGTCTCCTACAGCGCAATTGAAGACGTTCAGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621537.4
CDS GCA 72 bp TCAAGAGTTATTTTGTCGCGGTTGCAAACGTCTTCCTaGCTTGAGCTGGGAGCTTCACCAGGCTTCGGTGTA +
Preference number: 6 (lower is better)
Translates to: SRVILSRLQTSS*LELGASPGFGV
Trigger: TACACCGAAGCCTGGTGAAGCTCCCAGCTCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp TTTGAGAACACCAGGGCGAGAATGCTATTTCAGCACTaGAGGGGACAGGAATTGAACAGCAGAGGACGAAGG +
Preference number: 6 (lower is better)
Translates to: FENTRARMLFQH*RGQELNSRGRR
Trigger: CCTTCGTCCTCTGCTGTTCAATTCCTGTCCCCTGCAGTGCTGAAATAGCATTCTCGCCCTGGTGTTCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS CCA 72 bp ACTTCTCATGTGCGAGAGCTTCTTTGGGGAATGGAATaGGTTGAAGCAAACTGGCCAGAGACGGTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: TSHVRELLWGME*VEANWPETVSS
Trigger: ACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCTCTCGCACATGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000565680.1
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp GTAACGGCCCAGGCTTTAGCTGCCTTGGGTATAAAATaGGGCAATGACATGTGTCGTCTTCTCACTGTGCTG +
Preference number: 6 (lower is better)
Translates to: VTAQALAALGIK*GNDMCRLLTVL
Trigger: CAGCACAGTGAGAAGACGACACATGTCATTGCCCCATTTTATACCCAAGGCAGCTAAAGCCTGGGCCGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 72 bp GAGCTTCTTTGGGGAATGGAATGGGTTGAAGCAAACTaGCCAGAGACGGTCTCCAGTCATCATAGTCTGACC +
Preference number: 6 (lower is better)
Translates to: ELLWGMEWVEAN*PETVSSHHSLT
Trigger: GGTCAGACTATGATGACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565680.1
CDS CAA 72 bp TCAGGCAAGTCCTGCAGTCAAGAAACCCGCTTAACTTaGTTTCCTCCAGCAACCCCCAGCCTTCCACCAAAT +
Preference number: 6 (lower is better)
Translates to: SGKSCSQETRLT*FPPATPSLPPN
Trigger: ATTTGGTGGAAGGCTGGGGGTTGCTGGAGGAAACAAAGTTAAGCGGGTTTCTTGACTGCAGGACTTGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CAA 90 bp TCTGTGCTCTCCAGGGTTGAGATGATCTGCAGTTGGGTGTCGTTGTaGTCGATGATGTTGTATTCCAGCATCAAGCACAGGATCTCCACC +
Preference number: 6 (lower is better)
Translates to: SVLSRVEMICSWVSL*SMMLYSSIKHRIST
Trigger: GGTGGAGATCCTGTGCTTGATGCTGGAATACAACATCATCGACAACAACGACACCCAACTGCAGATCATCTCAACCCTGGAGAGCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp AAGCCAAGTGCTTGGCTTGGAGCCTCAGATAAGAAATaGGTAAGTGACAGTCACGGTCACCATCACCACCAC +
Preference number: 6 (lower is better)
Translates to: KPSAWLGASDKK*VSDSHGHHHHH
Trigger: GTGGTGGTGATGGTGACCGTGACTGTCACTTACTCATTTCTTATCTGAGGCTCCAAGCCAAGCACTTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS CCA 72 bp GCAGTGCTTGCAAAAGAATTCACAGAGATCTGGTGGTaGGTGGTTGTTTTCCAGCAAAGGAGCGATTGCCAC +
Preference number: 6 (lower is better)
Translates to: AVLAKEFTEIWW*VVVFQQRSDCH
Trigger: GTGGCAATCGCTCCTTTGCTGGAAAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp GAGCTTCTTTGGGGAATGGAATGGGTTGAAGCAAACTaGCCAGAGACGGTCTCCAGTCATCATAGTCTGACA +
Preference number: 6 (lower is better)
Translates to: ELLWGMEWVEAN*PETVSSHHSLT
Trigger: TGTCAGACTATGATGACTGGAGACCGTCTCTGGCCAGTTTGCTTCAACCCATTCCATTCCCCAAAGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp ACGTCTGTGCTCTCCAGGGTTGAGATGATCTGCAGTTaGGTGTCGTTGTTGTCGATGATGTTGTATTCCAGC +
Preference number: 6 (lower is better)
Translates to: TSVLSRVEMICS*VSLLSMMLYSS
Trigger: GCTGGAATACAACATCATCGACAACAACGACACCCAACTGCAGATCATCTCAACCCTGGAGAGCACAGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp GCCGGGCACAAAGAAAGTTATCATGGATGCAGCTATTaGTTTGGTGACCTCAGACCCCTCATGATAGTGGGA +
Preference number: 6 (lower is better)
Translates to: AGHKESYHGCSY*FGDLRPLMIVG
Trigger: TCCCACTATCATGAGGGGTCTGAGGTCACCAAACCAATAGCTGCATCCATGATAACTTTCTTTGTGCCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569146.1
ENST00000623842.1
CDS TCA 72 bp GGTGACAGATTGGCTTTAAGCCATCGCACCACTGCCTaGGTCGCTTTAAACAAGCAACCGAGTCAGTACTTA +
Preference number: 6 (lower is better)
Translates to: GDRLALSHRTTA*VALNKQPSQYL
Trigger: TAAGTACTGACTCGGTTGCTTGTTTAAAGCGACTCAGGCAGTGGTGCGATGGCTTAAAGCCAATCTGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS GCA 72 bp TCTGCACACATGAATGGGAAAGGCTCAGGCAAGTCCTaGAGTCAAGAAACCCGCTTAACTTTGTTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SAHMNGKGSGKS*SQETRLTLFPP
Trigger: TGGAGGAAACAAAGTTAAGCGGGTTTCTTGACTGCAGGACTTGCCTGAGCCTTTCCCATTCATGTGTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623842.1
CDS CCA 72 bp TCTGCAGTGCTTGCAAAAGAATTCACAGAGATCTGGTaGTGGGTGGTTGTTTTCCAGCAAAGGAGCGATTGC +
Preference number: 6 (lower is better)
Translates to: SAVLAKEFTEIW*WVVVFQQRSDC
Trigger: GCAATCGCTCCTTTGCTGGAAAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAAGCACTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp CTCTCTGCAGTGCTTGCAAAAGAATTCACAGAGATCTaGTGGTGGGTGGTTGTTTTCCAGCAAAGGAGCGAT +
Preference number: 6 (lower is better)
Translates to: LSAVLAKEFTEI*WWVVVFQQRSD
Trigger: ATCGCTCCTTTGCTGGAAAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAAGCACTGCAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CAA 72 bp TCCAGGGTTGAGATGATCTGCAGTTGGGTGTCGTTGTaGTCGATGATGTTGTATTCCAGCATCAAGCACAGG +
Preference number: 6 (lower is better)
Translates to: SRVEMICSWVSL*SMMLYSSIKHR
Trigger: CCTGTGCTTGATGCTGGAATACAACATCATCGACAACAACGACACCCAACTGCAGATCATCTCAACCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS GCA 72 bp CCTTCAGATCTTCGTAGGTGTCAGCTGAGAGCTTGGTaGTGTTCATGTTTAAACTGCAGAGACTCTTCATGG +
Preference number: 6 (lower is better)
Translates to: PSDLRRCQLRAW*CSCLNCRDSSW
Trigger: CCATGAAGAGTCTCTGCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTGACACCTACGAAGATCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000561605.1
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp TGCTTGCAAAAGAATTCACAGAGATCTGGTGGTGGGTaGTTGTTTTCCAGCAAAGGAGCGATTGCCACAATG +
Preference number: 6 (lower is better)
Translates to: CLQKNSQRSGGG*LFSSKGAIATM
Trigger: CATTGTGGCAATCGCTCCTTTGCTGGAAAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp TGGCCTTCAGATCTTCGTAGGTGTCAGCTGAGAGCTTaGTGCTGTTCATGTTTAAACTGCAGAGACTCTTCA +
Preference number: 6 (lower is better)
Translates to: WPSDLRRCQLRA*CCSCLNCRDSS
Trigger: TGAAGAGTCTCTGCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTGACACCTACGAAGATCTGAAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566513.5
ENST00000621537.4
CDS CAA 90 bp TGTCCACCAGGGTCCGGATCTCTTTCAAGACAACTTCCCAGCGGCTaGGGTTACTCAGCACTTTCTTATATTTGTAAATCTTTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: CPPGSGSLSRQLPSG*GYSALSYICKSFSG
Trigger: CCCAGAAAAAGATTTACAAATATAAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTGTCTTGAAAGAGATCCGGACCCTGGTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398040.8
CDS CCA 72 bp AAAGGAGCGATTGCCACAATGATGTTTTCATGCTCCTaGGTGGTCAAGTTTGTGTTCTCTGAGAGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: KGAIATMMFSCS*VVKFVFSESSF
Trigger: GAAACTGCTCTCAGAGAACACAAACTTGACCACCCAGGAGCATGAAAACATCATTGTGGCAATCGCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CAA 72 bp TTGCAAAAGAATTCACAGAGATCTGGTGGTGGGTGGTaGTTTTCCAGCAAAGGAGCGATTGCCACAATGATG +
Preference number: 6 (lower is better)
Translates to: LQKNSQRSGGGW*FSSKGAIATMM
Trigger: CATCATTGTGGCAATCGCTCCTTTGCTGGAAAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CCA 72 bp AGCTTGGACTCCAGTCTGAGCCTCATCTTTCCCGTATaGAAAATGGCAACAACGATAATCATCAACCTTATG +
Preference number: 6 (lower is better)
Translates to: SLDSSLSLIFPV*KMATTIIINLM
Trigger: CATAAGGTTGATGATTATCGTTGTTGCCATTTTCCATACGGGAAAGATGAGGCTCAGACTGGAGTCCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565029.5
CDS CAA 72 bp GGGTCCGGATCTCTTTCAAGACAACTTCCCAGCGGCTaGGGTTACTCAGCACTTTCTTATATTTGTAAATCT +
Preference number: 6 (lower is better)
Translates to: GSGSLSRQLPSG*GYSALSYICKS
Trigger: AGATTTACAAATATAAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTGTCTTGAAAGAGATCCGGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000564666.1
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS CAA 90 bp TGTCCACCAGGGTCCGGATCTCTTTCAAGACAACTTCCCAGCGGCTaGGGTTACTCAGCACTTTCTTATATTTGTAAATCTTTTTCAAGT +
Preference number: 6 (lower is better)
Translates to: CPPGSGSLSRQLPSG*GYSALSYICKSFSS
Trigger: ACTTGAAAAAGATTTACAAATATAAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTGTCTTGAAAGAGATCCGGACCCTGGTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564666.1
CDS CCA 72 bp GGTCCGGATCTCTTTCAAGACAACTTCCCAGCGGCTTaGGTTACTCAGCACTTTCTTATATTTGTAAATCTT +
Preference number: 6 (lower is better)
Translates to: GPDLFQDNFPAA*VTQHFLIFVNL
Trigger: AAGATTTACAAATATAAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTGTCTTGAAAGAGATCCGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398040.8
ENST00000537098.8
ENST00000539778.6
ENST00000564666.1
ENST00000566462.2
ENST00000566513.5
ENST00000621537.4
CDS TCA 72 bp AAGAAGATGAAGTTCCCTTTATGTGCCAGAAAGCTCTaGACCATCCTATGTAGAGCCAGAATCAGAAAATTA +
Preference number: 6 (lower is better)
Translates to: KKMKFPLCARKL*TILCRARIRKL
Trigger: TAATTTTCTGATTCTGGCTCTACATAGGATGGTTCAGAGCTTTCTGGCACATAAAGGGAACTTCATCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565029.5