Pregenerated sensors for CMC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000182712Ensembl transcript IDs: ENST00000369479.1, ENST00000369484.8
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATGACGTGAGCCCGGGGTaGGCCGAGGGGCATCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDDVSPG*AEGHPG Trigger: CCCGGGATGCCCCTCGGCTCACCCCGGGCTCACGTC...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGCCAGGATCGCGACGTaGGCCCGGGGTGAGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQARIAT*ARGEPR Trigger: CCTCGGCTCACCCCGGGCTCACGTCGCGATCCTGGC...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATCTCGAACCGAAGTTATaGGGCGCGGGCCGGCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDLEPKL*GAGRQP Trigger: CGGTTGCCGGCCCGCGCCTCATAACTTCGGTTCGAG...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATTCACAGGCTTGCTTCTaGCACGGATCCTTCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDSQACF*HGSFCG Trigger: GCCGCAGAAGGATCCGTGCCAGAAGCAAGCCTGTGA...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGTCACAGGCTTGCTTCTaGCACGGATCCTTCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQSQACF*HGSFCG Trigger: GCCGCAGAAGGATCCGTGCCAGAAGCAAGCCTGTGA...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATGACAGCCTGACACTTTaGTTCCATGTAGCTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDDSLTL*FHVAVG Trigger: GCCAACAGCTACATGGAATCAAAGTGTCAGGCTGTC...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATCTTCCCTTGGGATACTaGGCACAACACTTACGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDLPLGY*AQHLRS Trigger: ACTGCGTAAGTGTTGTGCTCAGTATCCCAAGGGAAG...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATTGCTGCTACCTGGCCTaGAGAGTCAGGAGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDCCYLA*RVRRIK Trigger: TTTTATCCTCCTGACTCTTCAGGCCAGGTAGCAGCA...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR GCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATTGTATCTCACAGGCTTaGTTCTGGCACGGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDCISQA*FWHGSF Trigger: GAAGGATCCGTGCCAGAAGCAAGCCTGTGAGATACA...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATCTATTTGCTGCTACCTaGCCTGAAGAGTCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDLFAAT*PEESGG Trigger: TCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAG...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGACAGCCTGACACTTTaGTTCCATGTAGCTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQDSLTL*FHVAVG Trigger: GCCAACAGCTACATGGAATCAAAGTGTCAGGCTGTC...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGCTTCCCTTGGGATACTaGGCACAACACTTACGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQLPLGY*AQHLRS Trigger: ACTGCGTAAGTGTTGTGCTCAGTATCCCAAGGGAAG...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGTGTATCTCACAGGCTTaGTTCTGGCACGGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQCISQA*FWHGSF Trigger: GAAGGATCCGTGCCAGAAGCAAGCCTGTGAGATACA...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGCTATTTGCTGCTACCTaGCCTGAAGAGTCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQLFAAT*PEESGG Trigger: TCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAG...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATACTAAGTGCTTTTGTTaGCTTGCTTTCTGCCTACGT | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDTKCFC*LAFCLR Trigger: ACGTAGGCAGAAAGCAAGTCAACAAAAGCACTTAGT...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATTTCTGTAGAAGGTGCTaGCTTTTGTGGGATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDFCRRC*LLWDSS Trigger: TGATGAATCCCACAAAAGTCAGCACCTTCTACAGAA...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS-3UTR CCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGCGACAGATCTTCCCTTaGGATACTGAGCACAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQRQIFP*DTEHNT Trigger: AGTGTTGTGCTCAGTATCCCAAGGGAAGATCTGTCG...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATTTCTTTTTCAAATCCTaGACAGACGACAGATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDFFFKS*TDDRSS Trigger: GGAAGATCTGTCGTCTGTTCAGGATTTGAAAAAGAA...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATTTGCAGTATTCTTCATaGCCCTTGCTAAACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDLQYSS*PLLNFC Trigger: ACAGAAGTTTAGCAAGGGTCATGAAGAATACTGCAA...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGTCAAGTTACGGATCCTaGCTAAGTGCTTTTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQSSYGS*LSAFVD Trigger: GTCAACAAAAGCACTTAGTCAGGATCCGTAACTTGA...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATATTCCATGTAGCTGTTaGCTTGTAAACATTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ADFFICYLLLPGLKSQEDIPCSC*LVNISV Trigger: TACAGAAATGTTTACAAGCCAACAGCTACATGGAAT...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGATTCCATGTAGCTGTTaGCTTGTAAACATTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FVADFFICYLLLPGLKSQIPCSC*LVNISV Trigger: TACAGAAATGTTTACAAGCCAACAGCTACATGGAAT...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS CCA 90 bp | CAAGCGTGTAGGCCGCGCACGGGTCTCCTTAGCGGGCGGGCAAAATaGGCGCCGGTACTCGGGAGGCGCCTGCCCAGGCGCCCGGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QACRPRTGLLSGRAK*APVLGRRLPRRPGA Trigger: GGCGCCCGGGCGCCTGGGCAGGCGCCTCCCGAGTACCGGCGCCCATTTTGCCCGCCCGCTAAGGAGACCCGTGCGCGGCCTACACGCTTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS CCA 90 bp | GGTCACTCGAACCGAAGTTATGAGGCGCGGGCCGGCAACCGGAAGTaGTCCAGGGAGAGTTGTACGAGATTCGGGGGCTGTGACTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GHSNRSYEARAGNRK*SRESCTRFGGCDLE Trigger: TTCCAAGTCACAGCCCCCGAATCTCGTACAACTCTCCCTGGACCACTTCCGGTTGCCGGCCCGCGCCTCATAACTTCGGTTCGAGTGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGTGGTCCAGGGAGAGTaGTACGAGATTCGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FVADFFICYLLLPGLKSQVVQGE*YEIRGL Trigger: CAGCCCCCGAATCTCGTACAACTCTCCCTGGACCAC...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS GCA 90 bp | GCGGCATATCCAGAAAAAGGATGGGAGAAGGAAAGGCAGGTGAATTaGTGCAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAYPEKGWEKERQVN*CRANKRQIDVDAAR Trigger: CCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCAATTCACCTGCCTTTCCTTCTCCCATCCTTTTTCTGGATATGCCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS GCA 90 bp | GCATATCCAGAAAAAGGATGGGAGAAGGAAAGGCAGGTGAATTGCTaGAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AYPEKGWEKERQVNC*RANKRQIDVDAARS Trigger: GCTCCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCAATTCACCTGCCTTTCCTTCTCCCATCCTTTTTCTGGATATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS-3UTR CAA 90 bp | GCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGGAGGATACACTTACGCAGTTCTaGGATGACAGCCTGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: ADFFICYLLLPGLKSQEDTLTQF*DDSLTL Trigger: AAGTGTCAGGCTGTCATCCAAGAACTGCGTAAGTGT...ATCCTCCTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS TCA 90 bp | ATCTTCCCTTGGGATACTGAGCACAACACTTACGCAGTTCTTGGATaGCAGCCTGACACTTTGATTCCATGTAGCTGTTGGCTTGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IFPWDTEHNTYAVLG*QPDTLIPCSCWLVN Trigger: GTTTACAAGCCAACAGCTACATGGAATCAAAGTGTCAGGCTGTCATCCAAGAACTGCGTAAGTGTTGTGCTCAGTATCCCAAGGGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGAGTGCTTTTGTTGACTaGCTTTCTGCCTACGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: FVADFFICYLLLPGLKSQSAFVD*LSAYVT Trigger: GGTTACGTAGGCAGAAAGCAAGTCAACAAAAGCACT...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGCAGAAGAACTTTACTTaGATGCAGACTTCCGTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FVADFFICYLLLPGLKSQQKNFT*MQTSVL Trigger: TAACACGGAAGTCTGCATCAAAGTAAAGTTCTTCTG...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGCTGACTTTTTCATTTGCTATTTGCTGCTACCTGGCCTGAAGAGTCAGCTAAACTTCTGTTTCTaGAGCAGTTTTTCAACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FVADFFICYLLLPGLKSQLNFCF*SSFSTH Trigger: GTGGGTTGAAAAACTGCTCAAGAAACAGAAGTTTAG...CTGACTCTTCAGGCCAGGTAGCAGCAAATAGCAAATGAAAAAGTCAGCTACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS TCA 72 bp | CTCCCACCCTGGGCCACTCAAGCCAGGATCGCGACGTaGGCCCGGGGTGAGCCGAGGGGCATCCCGGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LPPWATQARIAT*ARGEPRGIPGR Trigger: TCGGCCCGGGATGCCCCTCGGCTCACCCCGGGCTCACGTCGCGATCCTGGCTTGAGTGGCCCAGGGTGGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS TCA 72 bp | GGCCACTCAAGCCAGGATCGCGACGTGAGCCCGGGGTaGGCCGAGGGGCATCCCGGGCCGAGGTCACTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GHSSQDRDVSPG*AEGHPGPRSLE Trigger: TTCGAGTGACCTCGGCCCGGGATGCCCCTCGGCTCACCCCGGGCTCACGTCGCGATCCTGGCTTGAGTGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS TCA 72 bp | GGGCATCCCGGGCCGAGGTCACTCGAACCGAAGTTATaGGGCGCGGGCCGGCAACCGGAAGTGGTCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GHPGPRSLEPKL*GAGRQPEVVQG Trigger: TCCCTGGACCACTTCCGGTTGCCGGCCCGCGCCTCATAACTTCGGTTCGAGTGACCTCGGCCCGGGATGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS TCA 72 bp | AATCCTGAACAGACGACAGATCTTCCCTTGGGATACTaGGCACAACACTTACGCAGTTCTTGGATGACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NPEQTTDLPLGY*AQHLRSSWMTA Trigger: GGCTGTCATCCAAGAACTGCGTAAGTGTTGTGCTCAGTATCCCAAGGGAAGATCTGTCGTCTGTTCAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS CCA 72 bp | GCTTGTAAACATTTCTGTATCTCACAGGCTTGCTTCTaGCACGGATCCTTCTGCGGCATATCCAGAAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ACKHFCISQACF*HGSFCGISRKR Trigger: CCTTTTTCTGGATATGCCGCAGAAGGATCCGTGCCAGAAGCAAGCCTGTGAGATACAGAAATGTTTACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369479.1 |
||
| CDS CCA 72 bp | GCTTGTAAACATTTCTGTATCTCACAGGCTTGCTTCTaGCACGGATCCTTCTGCGGCATATCCAGAAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: ACKHFCISQACF*HGSFCGISRKM Trigger: CATTTTTCTGGATATGCCGCAGAAGGATCCGTGCCAGAAGCAAGCCTGTGAGATACAGAAATGTTTACAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369484.8 |
||
| CDS CCA 72 bp | CTTTTTCAAATCCTGAACAGACGACAGATCTTCCCTTaGGATACTGAGCACAACACTTACGCAGTTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFQILNRRQIFP*DTEHNTYAVLG Trigger: TCCAAGAACTGCGTAAGTGTTGTGCTCAGTATCCCAAGGGAAGATCTGTCGTCTGTTCAGGATTTGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS CAA 72 bp | TGGAAACATGGAGCAGCACTTCAGAAGAACTTTACTTaGATGCAGACTTCCGTGTTAGGTTTTCTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WKHGAALQKNFT*MQTSVLGFLPL Trigger: AAGAGGAAGAAAACCTAACACGGAAGTCTGCATCAAAGTAAAGTTCTTCTGAAGTGCTGCTCCATGTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||
| CDS CAA 90 bp | TTCATTTGGTGGAAACATGGAGCAGCACTTCAGAAGAACTTTACTTaGATGCAGACTTCCGTGTTAGGTTTTCTTCCTCTTCTTTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: FIWWKHGAALQKNFT*MQTSVLGFLPLLFQ Trigger: TTGAAAAAGAAGAGGAAGAAAACCTAACACGGAAGTCTGCATCAAAGTAAAGTTCTTCTGAAGTGCTGCTCCATGTTTCCACCAAATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000369479.1 ENST00000369484.8 |
||